Query 014581
Match_columns 422
No_of_seqs 237 out of 2395
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ef8_A Dihydroorotate dehydrog 100.0 4.6E-59 1.6E-63 464.2 28.4 316 37-378 27-348 (354)
2 3oix_A Putative dihydroorotate 100.0 6.6E-58 2.3E-62 454.8 28.3 309 41-374 32-342 (345)
3 3i65_A Dihydroorotate dehydrog 100.0 2.9E-56 1E-60 449.6 28.9 319 24-375 56-413 (415)
4 3zwt_A Dihydroorotate dehydrog 100.0 6E-55 2E-59 437.5 31.1 304 42-375 45-366 (367)
5 3tjx_A Dihydroorotate dehydrog 100.0 7.6E-54 2.6E-58 429.5 28.5 309 41-375 31-345 (354)
6 1tv5_A Dhodehase, dihydroorota 100.0 1.4E-50 4.7E-55 413.4 28.8 300 43-375 78-441 (443)
7 1jub_A Dihydroorotate dehydrog 100.0 3.7E-50 1.3E-54 395.8 29.8 304 47-374 2-309 (311)
8 2e6f_A Dihydroorotate dehydrog 100.0 1.6E-49 5.4E-54 391.8 26.9 305 44-374 1-311 (314)
9 1gte_A Dihydropyrimidine dehyd 100.0 2E-46 6.9E-51 421.4 25.3 321 43-371 529-851 (1025)
10 1ep3_A Dihydroorotate dehydrog 100.0 5.3E-45 1.8E-49 358.4 25.0 305 42-375 2-308 (311)
11 1f76_A Dihydroorotate dehydrog 100.0 2.1E-40 7.2E-45 329.6 28.4 277 44-354 42-336 (336)
12 1p0k_A Isopentenyl-diphosphate 100.0 2.6E-27 8.8E-32 236.5 28.8 274 42-376 40-328 (349)
13 3b0p_A TRNA-dihydrouridine syn 99.9 4.3E-26 1.5E-30 227.6 20.8 229 55-353 1-241 (350)
14 1z41_A YQJM, probable NADH-dep 99.9 3E-25 1E-29 220.6 26.4 253 48-354 8-324 (338)
15 3gr7_A NADPH dehydrogenase; fl 99.9 1.2E-24 4E-29 216.3 28.0 253 48-354 8-324 (340)
16 1vhn_A Putative flavin oxidore 99.9 1E-25 3.5E-30 222.2 17.1 226 54-354 1-230 (318)
17 3sr7_A Isopentenyl-diphosphate 99.9 1.3E-24 4.6E-29 216.8 22.8 270 41-374 70-353 (365)
18 2nli_A Lactate oxidase; flavoe 99.9 6.3E-24 2.1E-28 213.0 27.8 254 42-375 65-360 (368)
19 3vkj_A Isopentenyl-diphosphate 99.9 1.6E-24 5.4E-29 217.0 18.6 276 40-375 42-342 (368)
20 2nzl_A Hydroxyacid oxidase 1; 99.9 3.2E-23 1.1E-27 209.3 27.0 254 42-375 79-383 (392)
21 3hgj_A Chromate reductase; TIM 99.9 4.4E-23 1.5E-27 205.8 27.2 254 48-354 7-335 (349)
22 1gox_A (S)-2-hydroxy-acid oxid 99.9 8.8E-23 3E-27 205.1 27.2 253 42-375 56-356 (370)
23 1kbi_A Cytochrome B2, L-LCR; f 99.9 1.4E-22 4.6E-27 211.1 29.4 260 42-374 174-478 (511)
24 2gou_A Oxidoreductase, FMN-bin 99.9 7.2E-23 2.5E-27 205.3 24.4 245 48-353 8-338 (365)
25 1vyr_A Pentaerythritol tetrani 99.9 1.9E-22 6.6E-27 202.1 27.2 246 48-353 8-339 (364)
26 3kru_A NADH:flavin oxidoreduct 99.9 1E-22 3.4E-27 202.3 24.1 249 48-351 7-321 (343)
27 3sgz_A Hydroxyacid oxidase 2; 99.9 3.4E-22 1.2E-26 197.9 27.7 255 42-376 54-349 (352)
28 1vcf_A Isopentenyl-diphosphate 99.9 6.2E-23 2.1E-27 203.5 22.1 268 42-373 43-329 (332)
29 2hsa_B 12-oxophytodienoate red 99.9 3.1E-22 1E-26 202.9 26.0 256 48-353 21-364 (402)
30 2r14_A Morphinone reductase; H 99.9 1.7E-22 5.7E-27 203.3 23.5 247 48-353 14-344 (377)
31 1o94_A Tmadh, trimethylamine d 99.9 7.1E-23 2.4E-27 222.8 20.6 258 48-353 12-337 (729)
32 3l5l_A Xenobiotic reductase A; 99.9 6.4E-22 2.2E-26 198.3 25.7 253 48-354 7-342 (363)
33 1icp_A OPR1, 12-oxophytodienoa 99.9 5.4E-22 1.8E-26 199.6 22.7 248 48-353 19-346 (376)
34 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.1E-21 3.8E-26 211.5 24.8 257 48-354 8-327 (671)
35 3gka_A N-ethylmaleimide reduct 99.9 2.7E-21 9.1E-26 193.1 24.6 247 42-354 7-333 (361)
36 1p4c_A L(+)-mandelate dehydrog 99.9 1.1E-20 3.8E-25 190.3 25.9 248 42-374 57-353 (380)
37 4ab4_A Xenobiotic reductase B; 99.9 7.1E-21 2.4E-25 190.1 23.9 241 48-354 7-325 (362)
38 3l5a_A NADH/flavin oxidoreduct 99.9 3.1E-21 1.1E-25 196.3 21.5 256 48-354 30-363 (419)
39 1ypf_A GMP reductase; GUAC, pu 99.9 1.5E-20 5.3E-25 186.5 25.0 244 42-374 31-322 (336)
40 3k30_A Histamine dehydrogenase 99.9 1.6E-20 5.4E-25 203.1 20.8 254 48-353 17-340 (690)
41 3aty_A Tcoye, prostaglandin F2 99.8 1.6E-19 5.3E-24 181.7 23.9 153 163-353 174-352 (379)
42 1eep_A Inosine 5'-monophosphat 99.8 6.5E-19 2.2E-23 179.0 26.6 284 42-374 26-383 (404)
43 2c6q_A GMP reductase 2; TIM ba 99.8 1.4E-17 4.9E-22 165.8 25.6 243 43-372 38-340 (351)
44 3tjl_A NADPH dehydrogenase; OL 99.8 3.9E-18 1.3E-22 172.0 19.5 252 48-354 17-363 (407)
45 2qr6_A IMP dehydrogenase/GMP r 99.8 6.3E-18 2.1E-22 171.2 20.2 279 42-372 52-388 (393)
46 3r2g_A Inosine 5'-monophosphat 99.8 6.7E-17 2.3E-21 160.6 23.3 234 45-372 30-317 (361)
47 3khj_A Inosine-5-monophosphate 99.8 4E-16 1.4E-20 155.8 28.5 213 40-341 27-241 (361)
48 4a3u_A NCR, NADH\:flavin oxido 99.8 2.1E-16 7.2E-21 157.9 25.7 248 48-354 7-332 (358)
49 3bo9_A Putative nitroalkan dio 99.7 4.5E-16 1.6E-20 153.7 20.5 200 42-342 10-211 (326)
50 2z6i_A Trans-2-enoyl-ACP reduc 99.7 6E-16 2.1E-20 153.2 21.4 187 55-342 10-197 (332)
51 4fo4_A Inosine 5'-monophosphat 99.7 3.2E-15 1.1E-19 149.3 24.5 215 40-341 28-245 (366)
52 4gbu_A NADPH dehydrogenase 1; 99.7 1.1E-15 3.8E-20 154.8 20.5 253 48-354 20-365 (400)
53 2gjl_A Hypothetical protein PA 99.6 1.7E-14 5.8E-19 142.4 21.3 192 55-342 13-207 (328)
54 3ffs_A Inosine-5-monophosphate 99.6 7.7E-14 2.6E-18 140.5 22.1 244 41-341 25-280 (400)
55 3bw2_A 2-nitropropane dioxygen 99.6 2.3E-13 7.8E-18 136.5 22.5 239 48-342 2-243 (369)
56 4fxs_A Inosine-5'-monophosphat 99.6 1.1E-13 3.6E-18 143.9 19.0 178 151-372 221-458 (496)
57 1jcn_A Inosine monophosphate d 99.5 1.9E-13 6.5E-18 142.9 20.1 167 165-372 256-482 (514)
58 4avf_A Inosine-5'-monophosphat 99.5 1.9E-13 6.6E-18 141.8 15.8 178 151-372 219-459 (490)
59 1mzh_A Deoxyribose-phosphate a 99.5 6.1E-13 2.1E-17 124.5 16.7 126 167-338 74-206 (225)
60 1xm3_A Thiazole biosynthesis p 99.5 3.2E-12 1.1E-16 122.4 21.8 221 48-355 3-228 (264)
61 4af0_A Inosine-5'-monophosphat 99.5 5.3E-11 1.8E-15 122.1 28.9 144 152-339 272-416 (556)
62 1ea0_A Glutamate synthase [NAD 99.4 2E-12 6.8E-17 145.9 18.2 155 201-373 975-1165(1479)
63 1vrd_A Inosine-5'-monophosphat 99.4 3E-12 1E-16 133.1 18.3 169 163-372 236-462 (494)
64 3usb_A Inosine-5'-monophosphat 99.4 4.3E-12 1.5E-16 132.3 18.3 167 165-372 257-481 (511)
65 1ofd_A Ferredoxin-dependent gl 99.4 2.7E-12 9.2E-17 145.1 17.1 154 201-372 1010-1199(1520)
66 1wv2_A Thiazole moeity, thiazo 99.4 5E-10 1.7E-14 105.0 27.5 222 48-354 10-236 (265)
67 1geq_A Tryptophan synthase alp 99.3 9.3E-12 3.2E-16 117.6 14.3 186 149-342 4-226 (248)
68 1qop_A Tryptophan synthase alp 99.3 4.7E-11 1.6E-15 114.5 19.3 192 140-342 8-240 (268)
69 1h5y_A HISF; histidine biosynt 99.3 6.2E-11 2.1E-15 111.4 19.3 171 137-364 66-250 (253)
70 2nv1_A Pyridoxal biosynthesis 99.3 5.6E-12 1.9E-16 123.2 11.6 204 149-378 21-282 (305)
71 2uva_G Fatty acid synthase bet 99.3 2.3E-11 8E-16 143.2 18.0 215 43-342 568-801 (2060)
72 2zbt_A Pyridoxal biosynthesis 99.3 4.4E-12 1.5E-16 123.3 9.6 206 149-378 21-282 (297)
73 3vnd_A TSA, tryptophan synthas 99.3 1.7E-10 5.7E-15 110.3 20.0 195 139-341 8-240 (267)
74 3nav_A Tryptophan synthase alp 99.3 1.6E-10 5.3E-15 110.7 18.9 192 139-341 10-242 (271)
75 3q58_A N-acetylmannosamine-6-p 99.3 1.1E-10 3.7E-15 109.4 17.4 163 139-354 60-227 (229)
76 3igs_A N-acetylmannosamine-6-p 99.3 1.5E-10 5E-15 108.7 18.1 164 139-355 60-228 (232)
77 1rd5_A Tryptophan synthase alp 99.3 3.7E-10 1.3E-14 107.7 21.2 192 140-342 9-236 (262)
78 2y88_A Phosphoribosyl isomeras 99.2 5.8E-11 2E-15 111.7 13.6 162 139-353 65-241 (244)
79 1zfj_A Inosine monophosphate d 99.2 3.7E-10 1.3E-14 117.2 19.4 167 165-372 234-461 (491)
80 2ekc_A AQ_1548, tryptophan syn 99.2 4.8E-10 1.6E-14 107.1 17.8 189 140-342 8-240 (262)
81 1me8_A Inosine-5'-monophosphat 99.2 1.3E-09 4.4E-14 113.5 20.4 168 166-371 244-471 (503)
82 2w6r_A Imidazole glycerol phos 99.2 4.7E-10 1.6E-14 106.9 14.8 172 139-364 65-252 (266)
83 1vzw_A Phosphoribosyl isomeras 99.1 7.9E-10 2.7E-14 104.0 15.6 162 139-353 66-238 (244)
84 3tdn_A FLR symmetric alpha-bet 99.1 3.4E-11 1.2E-15 113.9 6.2 163 139-354 70-246 (247)
85 1thf_D HISF protein; thermophI 99.1 2.2E-09 7.4E-14 101.5 18.5 172 136-364 62-247 (253)
86 1y0e_A Putative N-acetylmannos 99.1 2E-09 6.9E-14 99.8 17.8 127 169-341 81-209 (223)
87 1wa3_A 2-keto-3-deoxy-6-phosph 99.1 1.4E-09 4.8E-14 99.6 16.4 163 150-341 10-183 (205)
88 1ka9_F Imidazole glycerol phos 99.1 4.9E-09 1.7E-13 98.9 19.5 172 136-364 63-248 (252)
89 4adt_A Pyridoxine biosynthetic 99.1 5.6E-10 1.9E-14 108.1 10.9 193 139-378 69-282 (297)
90 2htm_A Thiazole biosynthesis p 99.1 4.1E-08 1.4E-12 92.3 23.1 220 49-355 4-228 (268)
91 3o07_A Pyridoxine biosynthesis 99.0 5.1E-10 1.7E-14 105.7 9.9 186 150-357 12-252 (291)
92 1ujp_A Tryptophan synthase alp 99.0 2.7E-09 9.3E-14 102.3 13.8 204 140-358 7-253 (271)
93 3f4w_A Putative hexulose 6 pho 99.0 8.5E-09 2.9E-13 94.7 16.3 151 139-342 43-193 (211)
94 2cu0_A Inosine-5'-monophosphat 99.0 1.2E-08 4.1E-13 105.7 18.1 164 166-372 230-453 (486)
95 3ovp_A Ribulose-phosphate 3-ep 99.0 2.6E-08 9E-13 93.1 18.3 189 151-363 6-226 (228)
96 2agk_A 1-(5-phosphoribosyl)-5- 99.0 3E-09 1E-13 101.4 12.0 164 140-354 68-256 (260)
97 1yxy_A Putative N-acetylmannos 99.0 7.5E-09 2.6E-13 96.8 14.5 126 167-341 92-220 (234)
98 1jvn_A Glutamine, bifunctional 98.9 2.6E-09 9E-14 112.4 11.7 159 166-364 350-549 (555)
99 1qo2_A Molecule: N-((5-phospho 98.9 9.1E-09 3.1E-13 96.7 14.2 158 139-351 65-237 (241)
100 2yzr_A Pyridoxal biosynthesis 98.9 6.5E-09 2.2E-13 100.8 12.8 85 151-251 19-104 (330)
101 2v82_A 2-dehydro-3-deoxy-6-pho 98.9 1.8E-08 6.1E-13 92.8 14.1 166 149-342 6-182 (212)
102 2uv8_G Fatty acid synthase sub 98.9 9.3E-09 3.2E-13 120.8 14.6 199 57-342 589-808 (2051)
103 3inp_A D-ribulose-phosphate 3- 98.8 8.4E-08 2.9E-12 90.4 16.9 173 150-342 28-229 (246)
104 1tqj_A Ribulose-phosphate 3-ep 98.7 1.8E-07 6.2E-12 87.4 15.1 176 151-342 6-207 (230)
105 3vk5_A MOEO5; TIM barrel, tran 98.7 5.3E-08 1.8E-12 92.6 11.1 171 161-352 51-273 (286)
106 3tha_A Tryptophan synthase alp 98.7 1.4E-07 4.7E-12 89.1 13.9 181 149-341 13-232 (252)
107 1h1y_A D-ribulose-5-phosphate 98.7 8E-07 2.7E-11 82.8 19.0 151 139-342 55-207 (228)
108 1rpx_A Protein (ribulose-phosp 98.7 3.3E-07 1.1E-11 85.3 15.7 172 151-342 12-213 (230)
109 2qjg_A Putative aldolase MJ040 98.7 2.4E-07 8.3E-12 88.4 14.8 147 167-369 103-266 (273)
110 3vzx_A Heptaprenylglyceryl pho 98.7 3.6E-07 1.2E-11 84.9 15.4 60 288-355 167-226 (228)
111 2yw3_A 4-hydroxy-2-oxoglutarat 98.7 7.6E-08 2.6E-12 88.6 10.4 147 150-341 13-184 (207)
112 2tps_A Protein (thiamin phosph 98.7 3.7E-07 1.3E-11 84.5 15.0 157 134-357 64-223 (227)
113 3ngj_A Deoxyribose-phosphate a 98.7 6E-07 2.1E-11 83.9 16.4 133 162-338 94-231 (239)
114 3qja_A IGPS, indole-3-glycerol 98.7 8.7E-07 3E-11 84.8 17.8 145 139-342 104-248 (272)
115 3ajx_A 3-hexulose-6-phosphate 98.6 1.4E-06 4.7E-11 79.5 17.7 149 139-342 43-192 (207)
116 3tsm_A IGPS, indole-3-glycerol 98.6 1.7E-06 5.8E-11 82.7 18.7 144 140-342 112-255 (272)
117 1yad_A Regulatory protein TENI 98.6 6.8E-07 2.3E-11 82.6 15.2 136 170-363 82-217 (221)
118 1xg4_A Probable methylisocitra 98.6 5.7E-06 2E-10 79.9 21.7 205 69-342 25-241 (295)
119 3jr2_A Hexulose-6-phosphate sy 98.6 8.8E-07 3E-11 81.9 14.9 151 139-342 49-200 (218)
120 3tdn_A FLR symmetric alpha-bet 98.6 3.1E-07 1.1E-11 86.5 11.8 100 221-354 22-125 (247)
121 2fli_A Ribulose-phosphate 3-ep 98.6 1.4E-06 4.8E-11 80.2 16.0 172 152-342 6-204 (220)
122 2f6u_A GGGPS, (S)-3-O-geranylg 98.6 5.6E-07 1.9E-11 84.1 13.1 48 288-342 177-224 (234)
123 3zen_D Fatty acid synthase; tr 98.6 9.8E-08 3.3E-12 116.0 9.5 197 57-342 427-652 (3089)
124 1viz_A PCRB protein homolog; s 98.6 8.9E-07 3.1E-11 83.1 13.9 157 166-349 23-223 (240)
125 1tqx_A D-ribulose-5-phosphate 98.5 2.1E-06 7.3E-11 79.9 16.3 150 139-342 54-207 (227)
126 3oa3_A Aldolase; structural ge 98.5 4.2E-06 1.4E-10 80.1 18.6 149 149-338 109-265 (288)
127 2p10_A MLL9387 protein; putati 98.5 4.5E-06 1.5E-10 79.2 17.1 174 147-354 92-274 (286)
128 3r12_A Deoxyribose-phosphate a 98.5 7.9E-06 2.7E-10 77.1 18.4 127 168-338 116-247 (260)
129 3ctl_A D-allulose-6-phosphate 98.5 2.9E-06 9.9E-11 79.3 15.2 153 140-342 49-202 (231)
130 1xi3_A Thiamine phosphate pyro 98.5 5.3E-06 1.8E-10 75.8 16.7 80 231-342 117-196 (215)
131 3w01_A Heptaprenylglyceryl pho 98.5 1.5E-06 5.2E-11 80.9 12.6 157 170-354 30-231 (235)
132 3o63_A Probable thiamine-phosp 98.4 5.2E-06 1.8E-10 78.1 15.5 82 231-342 144-225 (243)
133 1q6o_A Humps, 3-keto-L-gulonat 98.4 1.4E-05 4.9E-10 73.5 17.8 163 140-354 47-211 (216)
134 1pii_A N-(5'phosphoribosyl)ant 98.4 3.5E-06 1.2E-10 85.9 14.2 170 140-370 100-269 (452)
135 1thf_D HISF protein; thermophI 98.4 1.9E-06 6.6E-11 81.0 11.3 91 230-354 30-120 (253)
136 4e38_A Keto-hydroxyglutarate-a 98.4 1.4E-05 4.8E-10 74.5 16.6 134 138-341 74-207 (232)
137 3cu2_A Ribulose-5-phosphate 3- 98.3 1.5E-05 5.1E-10 74.7 16.7 169 152-342 16-223 (237)
138 1ub3_A Aldolase protein; schif 98.3 2.5E-05 8.6E-10 72.3 17.1 144 149-336 54-205 (220)
139 2pgw_A Muconate cycloisomerase 98.3 2.3E-05 7.9E-10 78.5 18.2 153 151-364 138-294 (384)
140 1w8s_A FBP aldolase, fructose- 98.3 1.5E-05 5E-10 75.9 15.5 135 169-357 98-250 (263)
141 1ka9_F Imidazole glycerol phos 98.3 3.5E-06 1.2E-10 79.2 11.0 91 230-354 31-121 (252)
142 3ndo_A Deoxyribose-phosphate a 98.3 1.8E-05 6.2E-10 73.6 15.4 128 168-338 85-221 (231)
143 3ih1_A Methylisocitrate lyase; 98.3 9E-05 3.1E-09 71.7 20.5 208 70-353 38-260 (305)
144 1i4n_A Indole-3-glycerol phosp 98.2 1E-05 3.6E-10 76.3 13.2 143 140-342 93-236 (251)
145 4a29_A Engineered retro-aldol 98.2 3.6E-05 1.2E-09 72.2 16.1 154 140-353 96-249 (258)
146 1h5y_A HISF; histidine biosynt 98.2 9.4E-06 3.2E-10 75.7 11.8 89 231-353 34-122 (253)
147 1vc4_A Indole-3-glycerol phosp 98.2 4.3E-05 1.5E-09 72.3 16.1 145 140-342 98-242 (254)
148 3exr_A RMPD (hexulose-6-phosph 98.2 4E-05 1.4E-09 71.0 15.2 166 140-356 49-218 (221)
149 1qo2_A Molecule: N-((5-phospho 98.1 2.3E-06 7.7E-11 80.2 6.1 86 230-350 30-115 (241)
150 2czd_A Orotidine 5'-phosphate 98.1 5.5E-05 1.9E-09 69.2 15.0 141 141-342 44-191 (208)
151 3eoo_A Methylisocitrate lyase; 98.1 0.00035 1.2E-08 67.4 21.1 224 58-360 22-260 (298)
152 2nql_A AGR_PAT_674P, isomerase 98.1 4.6E-05 1.6E-09 76.4 15.5 153 150-363 153-310 (388)
153 2y88_A Phosphoribosyl isomeras 98.1 1.2E-05 4.2E-10 75.0 10.5 88 231-353 32-119 (244)
154 3cwo_X Beta/alpha-barrel prote 98.1 0.00019 6.6E-09 65.4 18.1 96 231-364 131-226 (237)
155 1vzw_A Phosphoribosyl isomeras 98.1 1.5E-05 5.2E-10 74.5 10.7 88 231-353 33-120 (244)
156 1mdl_A Mandelate racemase; iso 98.1 8.3E-05 2.9E-09 73.6 16.0 155 150-364 134-293 (359)
157 2hzg_A Mandelate racemase/muco 98.1 0.00017 5.9E-09 72.5 18.5 158 149-363 133-299 (401)
158 1zlp_A PSR132, petal death pro 98.1 0.00057 2E-08 66.4 21.3 213 58-342 39-263 (318)
159 2ovl_A Putative racemase; stru 98.0 0.00012 4E-09 73.0 16.9 156 150-364 134-295 (371)
160 1vhc_A Putative KHG/KDPG aldol 98.0 6.7E-05 2.3E-09 69.6 13.8 133 139-342 58-191 (224)
161 3lab_A Putative KDPG (2-keto-3 98.0 5.4E-05 1.8E-09 69.6 12.9 134 137-340 52-191 (217)
162 3lab_A Putative KDPG (2-keto-3 98.0 0.00019 6.6E-09 65.9 16.0 138 149-352 12-155 (217)
163 4gj1_A 1-(5-phosphoribosyl)-5- 98.0 0.00036 1.2E-08 65.4 18.3 150 140-342 67-230 (243)
164 1rvk_A Isomerase/lactonizing e 98.0 0.00055 1.9E-08 68.3 19.9 162 150-364 131-305 (382)
165 1s2w_A Phosphoenolpyruvate pho 97.9 0.0013 4.3E-08 63.5 21.3 217 69-352 27-254 (295)
166 2rdx_A Mandelate racemase/muco 97.9 0.00012 4.1E-09 73.1 14.5 151 150-364 135-290 (379)
167 1jvn_A Glutamine, bifunctional 97.9 1.7E-05 5.7E-10 83.4 8.5 93 231-353 281-396 (555)
168 2hjp_A Phosphonopyruvate hydro 97.9 0.0013 4.6E-08 63.1 21.1 223 69-361 23-257 (290)
169 4e38_A Keto-hydroxyglutarate-a 97.9 0.00045 1.5E-08 64.3 17.1 136 151-352 35-170 (232)
170 2ze3_A DFA0005; organic waste 97.9 0.0011 3.7E-08 63.3 19.7 195 69-342 24-238 (275)
171 1vcv_A Probable deoxyribose-ph 97.9 0.00084 2.9E-08 62.2 18.3 136 167-337 71-221 (226)
172 1mxs_A KDPG aldolase; 2-keto-3 97.9 0.00027 9.4E-09 65.5 14.6 149 139-359 67-220 (225)
173 1wbh_A KHG/KDPG aldolase; lyas 97.8 0.00045 1.5E-08 63.6 15.6 149 139-359 57-210 (214)
174 4gj1_A 1-(5-phosphoribosyl)-5- 97.8 5.9E-05 2E-09 70.9 9.4 91 229-353 30-120 (243)
175 2a4a_A Deoxyribose-phosphate a 97.8 0.00059 2E-08 65.1 16.0 131 161-331 104-249 (281)
176 1nu5_A Chloromuconate cycloiso 97.8 0.0011 3.8E-08 65.8 18.7 154 151-364 133-292 (370)
177 1n7k_A Deoxyribose-phosphate a 97.8 0.00025 8.4E-09 66.1 12.8 126 161-336 86-221 (234)
178 1p1x_A Deoxyribose-phosphate a 97.8 0.00053 1.8E-08 64.8 15.2 133 161-331 83-222 (260)
179 3stp_A Galactonate dehydratase 97.8 0.00059 2E-08 69.0 16.6 163 149-364 167-334 (412)
180 2w6r_A Imidazole glycerol phos 97.8 5.1E-05 1.7E-09 71.8 8.1 88 231-351 31-120 (266)
181 3ozy_A Putative mandelate race 97.8 0.00051 1.8E-08 68.8 15.8 154 150-363 139-299 (389)
182 2poz_A Putative dehydratase; o 97.7 0.00014 4.7E-09 73.0 11.4 137 160-336 136-280 (392)
183 2gl5_A Putative dehydratase pr 97.7 0.00029 1E-08 71.0 13.9 146 150-337 130-300 (410)
184 2qdd_A Mandelate racemase/muco 97.7 0.00058 2E-08 68.1 15.7 150 150-363 135-289 (378)
185 2qr6_A IMP dehydrogenase/GMP r 97.7 0.00018 6.3E-09 72.1 11.8 101 202-337 140-240 (393)
186 2qgy_A Enolase from the enviro 97.7 0.00072 2.5E-08 67.7 15.9 145 160-363 148-297 (391)
187 3eez_A Putative mandelate race 97.7 0.00045 1.5E-08 69.0 14.2 151 150-364 135-290 (378)
188 1vhc_A Putative KHG/KDPG aldol 97.7 0.0016 5.4E-08 60.3 16.7 136 151-352 18-153 (224)
189 2p8b_A Mandelate racemase/muco 97.7 0.00067 2.3E-08 67.3 15.1 153 151-364 132-290 (369)
190 3lye_A Oxaloacetate acetyl hyd 97.7 0.0036 1.2E-07 60.5 19.5 222 69-361 33-269 (307)
191 3fa4_A 2,3-dimethylmalate lyas 97.7 0.0041 1.4E-07 59.9 19.8 213 69-352 26-255 (302)
192 2og9_A Mandelate racemase/muco 97.7 0.00035 1.2E-08 70.1 12.7 156 150-364 149-311 (393)
193 3ceu_A Thiamine phosphate pyro 97.6 0.0004 1.4E-08 63.5 11.9 50 287-342 129-178 (210)
194 2ps2_A Putative mandelate race 97.6 0.0014 4.9E-08 65.0 16.9 151 150-364 136-292 (371)
195 2oz8_A MLL7089 protein; struct 97.6 0.0035 1.2E-07 62.7 19.7 152 150-364 133-292 (389)
196 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.0015 5.1E-08 60.0 15.6 138 149-352 15-152 (214)
197 3rcy_A Mandelate racemase/muco 97.6 0.0012 4.2E-08 67.0 16.2 156 150-350 126-297 (433)
198 2qq6_A Mandelate racemase/muco 97.6 0.00064 2.2E-08 68.5 13.7 132 161-336 149-291 (410)
199 4eiv_A Deoxyribose-phosphate a 97.6 0.0011 3.6E-08 63.3 14.2 120 169-327 106-252 (297)
200 1tkk_A Similar to chloromucona 97.6 0.003 1E-07 62.5 18.3 154 151-364 131-291 (366)
201 3iv3_A Tagatose 1,6-diphosphat 97.6 0.00061 2.1E-08 66.6 12.7 172 169-372 116-317 (332)
202 3glc_A Aldolase LSRF; TIM barr 97.6 0.00077 2.6E-08 64.9 13.3 153 148-355 104-274 (295)
203 4dwd_A Mandelate racemase/muco 97.6 0.0043 1.5E-07 62.2 19.2 142 150-339 126-274 (393)
204 2h6r_A Triosephosphate isomera 97.6 0.001 3.5E-08 61.3 13.6 129 170-342 76-205 (219)
205 2pp0_A L-talarate/galactarate 97.6 0.00069 2.4E-08 68.1 13.4 156 150-364 162-324 (398)
206 2o56_A Putative mandelate race 97.6 0.00083 2.8E-08 67.6 13.8 135 161-337 152-297 (407)
207 3q58_A N-acetylmannosamine-6-p 97.5 0.0028 9.4E-08 58.9 16.2 124 151-335 19-155 (229)
208 3kts_A Glycerol uptake operon 97.5 6.5E-05 2.2E-09 67.8 4.8 48 290-344 140-187 (192)
209 2ox4_A Putative mandelate race 97.5 0.00076 2.6E-08 67.8 13.0 147 150-338 126-292 (403)
210 3b8i_A PA4872 oxaloacetate dec 97.5 0.0079 2.7E-07 57.6 19.1 202 69-342 29-240 (287)
211 3sjn_A Mandelate racemase/muco 97.5 0.00083 2.8E-08 66.9 12.6 138 150-339 135-278 (374)
212 2qde_A Mandelate racemase/muco 97.5 0.0025 8.7E-08 63.8 16.2 154 150-364 135-293 (397)
213 3m47_A Orotidine 5'-phosphate 97.5 0.0015 5E-08 60.7 13.4 149 149-354 64-222 (228)
214 1tzz_A Hypothetical protein L1 97.5 0.0013 4.4E-08 65.9 13.9 156 150-364 151-318 (392)
215 3rr1_A GALD, putative D-galact 97.5 0.0011 3.7E-08 66.9 13.2 143 149-338 114-261 (405)
216 3igs_A N-acetylmannosamine-6-p 97.4 0.0045 1.5E-07 57.5 16.0 124 151-335 19-155 (232)
217 1mxs_A KDPG aldolase; 2-keto-3 97.4 0.0044 1.5E-07 57.3 15.5 134 151-351 27-161 (225)
218 2vc6_A MOSA, dihydrodipicolina 97.4 0.026 8.9E-07 54.1 21.5 161 133-351 52-218 (292)
219 3ve9_A Orotidine-5'-phosphate 97.4 0.0033 1.1E-07 57.7 14.5 153 140-358 42-204 (215)
220 3nl6_A Thiamine biosynthetic b 97.4 0.0037 1.3E-07 65.2 16.3 105 233-362 118-233 (540)
221 1o66_A 3-methyl-2-oxobutanoate 97.4 0.022 7.5E-07 54.0 19.9 145 58-251 17-182 (275)
222 3i4k_A Muconate lactonizing en 97.4 0.0094 3.2E-07 59.4 18.5 155 150-364 138-298 (383)
223 1yxy_A Putative N-acetylmannos 97.3 0.0032 1.1E-07 58.1 14.0 116 162-333 33-157 (234)
224 2zad_A Muconate cycloisomerase 97.3 0.0057 2E-07 60.0 16.6 131 150-336 129-265 (345)
225 4dbe_A Orotidine 5'-phosphate 97.3 0.011 3.6E-07 54.6 17.2 162 140-360 44-213 (222)
226 2gdq_A YITF; mandelate racemas 97.3 0.0013 4.5E-08 65.6 12.0 134 150-337 124-267 (382)
227 1xky_A Dihydrodipicolinate syn 97.3 0.036 1.2E-06 53.3 21.6 162 133-351 64-229 (301)
228 3na8_A Putative dihydrodipicol 97.3 0.033 1.1E-06 54.0 21.2 161 133-351 76-242 (315)
229 3sbf_A Mandelate racemase / mu 97.3 0.0038 1.3E-07 62.7 14.9 160 150-351 123-296 (401)
230 3bjs_A Mandelate racemase/muco 97.3 0.0017 5.7E-08 65.9 12.2 154 150-364 172-334 (428)
231 2ehh_A DHDPS, dihydrodipicolin 97.3 0.04 1.4E-06 52.8 21.3 162 133-351 52-218 (294)
232 3eb2_A Putative dihydrodipicol 97.3 0.024 8.2E-07 54.6 19.6 163 133-352 56-222 (300)
233 3m5v_A DHDPS, dihydrodipicolin 97.3 0.04 1.4E-06 53.0 21.2 161 133-352 59-226 (301)
234 1eix_A Orotidine 5'-monophosph 97.3 0.0057 2E-07 57.2 14.7 45 292-342 173-227 (245)
235 3r4e_A Mandelate racemase/muco 97.3 0.0015 5.2E-08 66.1 11.5 166 150-363 133-323 (418)
236 1to3_A Putative aldolase YIHT; 97.2 0.0034 1.2E-07 60.7 13.1 132 169-342 114-260 (304)
237 4e5t_A Mandelate racemase / mu 97.2 0.0022 7.4E-08 64.6 12.2 155 161-363 151-311 (404)
238 3tak_A DHDPS, dihydrodipicolin 97.2 0.038 1.3E-06 52.9 20.5 164 133-353 53-220 (291)
239 4e4u_A Mandalate racemase/muco 97.2 0.0032 1.1E-07 63.5 13.2 166 150-363 125-304 (412)
240 3qze_A DHDPS, dihydrodipicolin 97.2 0.035 1.2E-06 53.8 20.1 163 133-352 75-241 (314)
241 1y0e_A Putative N-acetylmannos 97.2 0.014 4.7E-07 53.3 16.5 130 151-337 6-147 (223)
242 3ru6_A Orotidine 5'-phosphate 97.2 0.026 9E-07 54.3 18.8 143 140-342 68-236 (303)
243 3flu_A DHDPS, dihydrodipicolin 97.2 0.037 1.3E-06 53.2 19.9 163 133-352 59-225 (297)
244 2qiw_A PEP phosphonomutase; st 97.2 0.0069 2.4E-07 57.0 14.3 201 58-338 20-238 (255)
245 3vav_A 3-methyl-2-oxobutanoate 97.2 0.035 1.2E-06 52.6 19.1 145 58-251 29-194 (275)
246 3fs2_A 2-dehydro-3-deoxyphosph 97.2 0.033 1.1E-06 53.4 18.9 202 48-335 28-259 (298)
247 1m3u_A 3-methyl-2-oxobutanoate 97.1 0.023 7.8E-07 53.6 17.4 145 58-251 17-182 (264)
248 3tji_A Mandelate racemase/muco 97.1 0.0056 1.9E-07 61.9 14.3 160 150-351 144-317 (422)
249 2hxt_A L-fuconate dehydratase; 97.1 0.0039 1.3E-07 63.4 13.1 146 160-364 197-347 (441)
250 3hgj_A Chromate reductase; TIM 97.1 0.019 6.6E-07 56.4 17.5 106 136-250 205-318 (349)
251 2rfg_A Dihydrodipicolinate syn 97.1 0.038 1.3E-06 53.1 18.8 161 133-350 52-216 (297)
252 2agk_A 1-(5-phosphoribosyl)-5- 97.1 0.00064 2.2E-08 64.4 6.2 84 230-354 38-125 (260)
253 3ro6_B Putative chloromuconate 97.1 0.0081 2.8E-07 59.3 14.5 154 150-364 130-289 (356)
254 2r8w_A AGR_C_1641P; APC7498, d 97.1 0.091 3.1E-06 51.3 21.7 166 133-351 86-255 (332)
255 3a5f_A Dihydrodipicolinate syn 97.1 0.035 1.2E-06 53.1 18.5 162 133-351 53-218 (291)
256 3dg3_A Muconate cycloisomerase 97.1 0.021 7.3E-07 56.4 17.5 154 150-364 129-288 (367)
257 4adt_A Pyridoxine biosynthetic 97.0 0.0016 5.6E-08 62.7 8.8 129 150-336 22-152 (297)
258 2wkj_A N-acetylneuraminate lya 97.0 0.086 2.9E-06 50.7 21.1 162 133-352 63-229 (303)
259 3iwp_A Copper homeostasis prot 97.0 0.038 1.3E-06 52.6 18.1 192 58-337 38-239 (287)
260 3toy_A Mandelate racemase/muco 97.0 0.011 3.8E-07 58.9 15.2 155 150-364 157-317 (383)
261 3l21_A DHDPS, dihydrodipicolin 97.0 0.12 4E-06 49.9 21.9 161 133-352 67-231 (304)
262 3qfe_A Putative dihydrodipicol 97.0 0.19 6.5E-06 48.7 23.6 165 133-352 63-234 (318)
263 1o5k_A DHDPS, dihydrodipicolin 97.0 0.09 3.1E-06 50.7 21.1 83 133-227 64-147 (306)
264 2v9d_A YAGE; dihydrodipicolini 97.0 0.053 1.8E-06 53.2 19.6 83 133-227 83-166 (343)
265 2yyu_A Orotidine 5'-phosphate 97.0 0.033 1.1E-06 52.0 17.2 48 288-342 164-221 (246)
266 1f6k_A N-acetylneuraminate lya 97.0 0.095 3.2E-06 50.1 20.8 161 133-351 56-220 (293)
267 1chr_A Chloromuconate cycloiso 97.0 0.014 4.6E-07 57.9 15.3 136 150-339 132-272 (370)
268 3jva_A Dipeptide epimerase; en 97.0 0.02 6.9E-07 56.4 16.4 153 151-364 130-287 (354)
269 3si9_A DHDPS, dihydrodipicolin 97.0 0.087 3E-06 51.0 20.6 161 133-351 74-240 (315)
270 2wqp_A Polysialic acid capsule 97.0 0.26 8.8E-06 48.3 23.9 171 134-362 90-272 (349)
271 3khj_A Inosine-5-monophosphate 97.0 0.0058 2E-07 60.5 12.3 128 149-336 45-173 (361)
272 3gr7_A NADPH dehydrogenase; fl 97.0 0.017 5.9E-07 56.6 15.6 105 135-250 196-307 (340)
273 3tfx_A Orotidine 5'-phosphate 97.0 0.023 8E-07 53.5 15.8 154 140-354 49-236 (259)
274 1z41_A YQJM, probable NADH-dep 97.0 0.03 1E-06 54.8 17.2 106 134-250 195-307 (338)
275 1sjd_A N-acylamino acid racema 97.0 0.0076 2.6E-07 59.6 13.1 151 151-364 131-286 (368)
276 3daq_A DHDPS, dihydrodipicolin 97.0 0.058 2E-06 51.7 18.9 164 133-352 54-221 (292)
277 4avf_A Inosine-5'-monophosphat 97.0 0.025 8.5E-07 58.3 17.3 70 231-336 229-298 (490)
278 3ugv_A Enolase; enzyme functio 96.9 0.025 8.5E-07 56.5 16.8 155 150-364 158-323 (390)
279 3cpr_A Dihydrodipicolinate syn 96.9 0.1 3.5E-06 50.3 20.6 161 133-352 68-232 (304)
280 3nvt_A 3-deoxy-D-arabino-heptu 96.9 0.14 4.6E-06 51.0 22.0 222 46-356 128-376 (385)
281 3tj4_A Mandelate racemase; eno 96.9 0.0081 2.8E-07 59.6 13.1 156 150-364 138-301 (372)
282 2b7n_A Probable nicotinate-nuc 96.9 0.0047 1.6E-07 58.8 10.8 92 207-341 169-262 (273)
283 1vli_A Spore coat polysacchari 96.9 0.089 3E-06 52.2 20.2 264 48-378 15-304 (385)
284 2yxg_A DHDPS, dihydrodipicolin 96.9 0.12 4E-06 49.4 20.7 83 133-227 52-135 (289)
285 3v3w_A Starvation sensing prot 96.9 0.0066 2.3E-07 61.4 12.4 166 150-363 139-329 (424)
286 2bdq_A Copper homeostasis prot 96.9 0.072 2.5E-06 48.9 18.1 148 149-342 54-213 (224)
287 1vs1_A 3-deoxy-7-phosphoheptul 96.9 0.12 4E-06 49.2 20.2 166 134-355 88-271 (276)
288 1w0m_A TIM, triosephosphate is 96.9 0.028 9.7E-07 51.8 15.4 51 307-359 173-223 (226)
289 3ddm_A Putative mandelate race 96.9 0.0056 1.9E-07 61.3 11.3 152 150-364 147-304 (392)
290 1zco_A 2-dehydro-3-deoxyphosph 96.9 0.051 1.8E-06 51.3 17.3 149 134-338 73-229 (262)
291 3d0c_A Dihydrodipicolinate syn 96.9 0.33 1.1E-05 46.9 23.5 80 133-225 64-144 (314)
292 3my9_A Muconate cycloisomerase 96.9 0.036 1.2E-06 55.0 17.0 155 150-364 136-295 (377)
293 3l5l_A Xenobiotic reductase A; 96.9 0.014 4.6E-07 57.9 13.8 106 136-250 211-325 (363)
294 2ojp_A DHDPS, dihydrodipicolin 96.8 0.045 1.5E-06 52.4 17.1 162 133-351 53-218 (292)
295 3ffs_A Inosine-5-monophosphate 96.8 0.064 2.2E-06 53.7 18.6 219 70-372 145-370 (400)
296 1vr6_A Phospho-2-dehydro-3-deo 96.8 0.14 4.9E-06 50.2 20.7 169 134-358 156-342 (350)
297 3h5d_A DHDPS, dihydrodipicolin 96.8 0.38 1.3E-05 46.4 24.8 160 133-350 59-223 (311)
298 3vcn_A Mannonate dehydratase; 96.8 0.0061 2.1E-07 61.7 11.4 147 150-339 140-311 (425)
299 4fxs_A Inosine-5'-monophosphat 96.8 0.031 1.1E-06 57.6 16.8 140 64-255 226-368 (496)
300 3mqt_A Mandelate racemase/muco 96.8 0.02 6.9E-07 57.2 14.9 148 150-350 133-295 (394)
301 3s5o_A 4-hydroxy-2-oxoglutarat 96.8 0.15 5.1E-06 49.1 20.4 165 133-351 66-234 (307)
302 3t6c_A RSPA, putative MAND fam 96.7 0.043 1.5E-06 55.7 16.9 168 150-363 145-343 (440)
303 3tml_A 2-dehydro-3-deoxyphosph 96.7 0.063 2.1E-06 51.3 16.9 223 48-356 4-272 (288)
304 3ldv_A Orotidine 5'-phosphate 96.7 0.087 3E-06 49.5 17.7 153 140-353 71-253 (255)
305 3mkc_A Racemase; metabolic pro 96.7 0.015 5E-07 58.3 13.0 158 150-364 138-310 (394)
306 3b4u_A Dihydrodipicolinate syn 96.7 0.29 9.8E-06 46.8 21.6 161 133-352 55-226 (294)
307 3tr2_A Orotidine 5'-phosphate 96.7 0.13 4.3E-06 47.9 18.4 154 140-354 52-236 (239)
308 3tcs_A Racemase, putative; PSI 96.7 0.095 3.2E-06 52.2 18.8 163 150-364 134-303 (388)
309 3ih1_A Methylisocitrate lyase; 96.7 0.045 1.5E-06 52.8 15.7 202 135-378 16-241 (305)
310 1oy0_A Ketopantoate hydroxymet 96.7 0.06 2.1E-06 51.2 16.3 145 58-251 34-200 (281)
311 1h1y_A D-ribulose-5-phosphate 96.7 0.013 4.3E-07 54.1 11.5 133 150-338 7-147 (228)
312 1hg3_A Triosephosphate isomera 96.7 0.079 2.7E-06 48.8 16.6 36 307-342 176-211 (225)
313 3q45_A Mandelate racemase/muco 96.7 0.021 7.2E-07 56.6 13.7 153 151-364 131-288 (368)
314 1dbt_A Orotidine 5'-phosphate 96.7 0.045 1.5E-06 50.8 15.2 36 307-342 175-220 (239)
315 3fv9_G Mandelate racemase/muco 96.6 0.061 2.1E-06 53.5 16.9 157 149-364 134-296 (386)
316 3gd6_A Muconate cycloisomerase 96.6 0.048 1.6E-06 54.4 16.0 153 150-364 128-291 (391)
317 3go2_A Putative L-alanine-DL-g 96.6 0.047 1.6E-06 54.8 16.0 156 161-364 143-314 (409)
318 3kru_A NADH:flavin oxidoreduct 96.6 0.045 1.5E-06 53.7 15.4 104 136-250 196-307 (343)
319 4fo4_A Inosine 5'-monophosphat 96.6 0.017 5.7E-07 57.3 12.3 131 149-336 46-177 (366)
320 3dz1_A Dihydrodipicolinate syn 96.6 0.27 9.4E-06 47.4 20.8 95 133-240 60-159 (313)
321 3jr2_A Hexulose-6-phosphate sy 96.6 0.092 3.1E-06 47.8 16.6 130 150-337 7-140 (218)
322 1qap_A Quinolinic acid phospho 96.5 0.017 6E-07 55.5 11.6 87 207-339 196-283 (296)
323 3eoo_A Methylisocitrate lyase; 96.5 0.1 3.5E-06 50.1 16.9 182 169-378 35-237 (298)
324 1o60_A 2-dehydro-3-deoxyphosph 96.5 0.26 9E-06 47.1 19.7 167 133-356 74-269 (292)
325 1vc4_A Indole-3-glycerol phosp 96.5 0.025 8.6E-07 53.2 12.4 75 231-341 66-140 (254)
326 3r0u_A Enzyme of enolase super 96.5 0.11 3.6E-06 51.7 17.6 154 150-364 132-292 (379)
327 1jub_A Dihydroorotate dehydrog 96.5 0.025 8.4E-07 54.5 12.6 114 133-250 143-271 (311)
328 3i6e_A Muconate cycloisomerase 96.5 0.1 3.5E-06 51.9 17.5 155 150-364 138-296 (385)
329 2jbm_A Nicotinate-nucleotide p 96.5 0.0093 3.2E-07 57.5 9.3 90 208-340 185-276 (299)
330 3sz8_A 2-dehydro-3-deoxyphosph 96.4 0.26 9E-06 46.9 18.9 168 133-357 76-272 (285)
331 3f4w_A Putative hexulose 6 pho 96.4 0.14 4.8E-06 46.0 16.4 129 151-338 2-136 (211)
332 3usb_A Inosine-5'-monophosphat 96.4 0.082 2.8E-06 54.7 16.5 141 59-253 246-391 (511)
333 3mwc_A Mandelate racemase/muco 96.4 0.074 2.5E-06 53.2 15.8 152 150-364 150-308 (400)
334 3e96_A Dihydrodipicolinate syn 96.4 0.28 9.6E-06 47.4 19.3 80 133-225 64-144 (316)
335 2hmc_A AGR_L_411P, dihydrodipi 96.3 0.27 9.1E-06 48.2 19.0 67 149-227 92-160 (344)
336 4e4f_A Mannonate dehydratase; 96.3 0.015 5.2E-07 58.8 10.4 166 150-363 139-331 (426)
337 2r91_A 2-keto-3-deoxy-(6-phosp 96.3 0.45 1.5E-05 45.2 20.2 81 133-227 50-131 (286)
338 1twd_A Copper homeostasis prot 96.3 0.17 5.8E-06 47.3 16.5 148 140-337 43-199 (256)
339 1r0m_A N-acylamino acid racema 96.3 0.043 1.5E-06 54.3 13.3 151 151-364 138-292 (375)
340 2zc8_A N-acylamino acid racema 96.3 0.048 1.7E-06 53.8 13.6 151 151-364 131-285 (369)
341 1w3i_A EDA, 2-keto-3-deoxy glu 96.2 0.51 1.7E-05 45.0 20.2 81 133-227 51-132 (293)
342 3zwt_A Dihydroorotate dehydrog 96.2 0.067 2.3E-06 53.0 14.2 115 133-250 201-327 (367)
343 1f76_A Dihydroorotate dehydrog 96.2 0.047 1.6E-06 53.1 12.8 99 149-250 211-318 (336)
344 3qja_A IGPS, indole-3-glycerol 96.2 0.054 1.9E-06 51.4 12.7 75 231-341 73-147 (272)
345 1xg4_A Probable methylisocitra 96.2 0.2 6.7E-06 48.1 16.6 159 169-355 30-203 (295)
346 1i4n_A Indole-3-glycerol phosp 96.2 0.12 4.2E-06 48.3 14.9 131 150-338 41-180 (251)
347 1x1o_A Nicotinate-nucleotide p 96.1 0.032 1.1E-06 53.3 10.9 88 207-340 183-272 (286)
348 1vkf_A Glycerol uptake operon 96.1 0.0044 1.5E-07 55.4 4.5 35 307-342 149-183 (188)
349 3ajx_A 3-hexulose-6-phosphate 96.1 0.13 4.4E-06 46.1 14.4 81 151-251 2-85 (207)
350 2r14_A Morphinone reductase; H 96.1 0.053 1.8E-06 53.9 12.8 101 135-250 218-328 (377)
351 3fkr_A L-2-keto-3-deoxyarabona 96.1 1.1 3.6E-05 43.1 22.0 98 133-240 60-161 (309)
352 3tsm_A IGPS, indole-3-glycerol 96.1 0.035 1.2E-06 52.7 10.6 75 231-341 80-154 (272)
353 3dgb_A Muconate cycloisomerase 96.0 0.18 6E-06 50.1 16.2 155 150-364 138-298 (382)
354 2p10_A MLL9387 protein; putati 96.0 0.34 1.2E-05 45.9 17.0 175 131-337 11-191 (286)
355 4ab4_A Xenobiotic reductase B; 96.0 0.1 3.5E-06 51.5 14.1 93 136-250 206-308 (362)
356 3dip_A Enolase; structural gen 96.0 0.067 2.3E-06 53.7 13.0 131 166-339 161-298 (410)
357 2e6f_A Dihydroorotate dehydrog 96.0 0.041 1.4E-06 53.0 11.0 114 133-250 145-273 (314)
358 4af0_A Inosine-5'-monophosphat 95.9 0.21 7.1E-06 51.5 16.3 132 70-255 282-418 (556)
359 3bo9_A Putative nitroalkan dio 95.9 0.17 5.8E-06 49.1 15.2 125 149-335 26-150 (326)
360 1zlp_A PSR132, petal death pro 95.9 0.31 1.1E-05 47.1 16.8 160 168-355 51-225 (318)
361 3r2g_A Inosine 5'-monophosphat 95.9 0.038 1.3E-06 54.6 10.4 70 231-336 100-169 (361)
362 1vqt_A Orotidine 5'-phosphate 95.9 0.037 1.3E-06 50.6 9.7 132 140-342 51-198 (213)
363 3ctl_A D-allulose-6-phosphate 95.9 0.038 1.3E-06 51.2 9.8 156 152-364 3-167 (231)
364 1jcn_A Inosine monophosphate d 95.9 0.38 1.3E-05 49.6 18.5 107 136-254 283-391 (514)
365 1vyr_A Pentaerythritol tetrani 95.8 0.12 4E-06 51.1 13.9 100 135-250 213-323 (364)
366 3gka_A N-ethylmaleimide reduct 95.8 0.1 3.6E-06 51.5 13.1 92 137-250 215-316 (361)
367 3e96_A Dihydrodipicolinate syn 95.8 0.031 1.1E-06 54.2 9.2 85 160-253 30-116 (316)
368 2wkj_A N-acetylneuraminate lya 95.7 0.054 1.9E-06 52.1 10.7 85 160-253 29-116 (303)
369 3p3b_A Mandelate racemase/muco 95.7 0.058 2E-06 53.8 11.1 153 163-364 150-307 (392)
370 3fcp_A L-Ala-D/L-Glu epimerase 95.7 0.27 9.3E-06 48.7 15.9 155 150-364 137-297 (381)
371 3qze_A DHDPS, dihydrodipicolin 95.7 0.075 2.6E-06 51.4 11.5 85 160-253 41-128 (314)
372 2gou_A Oxidoreductase, FMN-bin 95.7 0.074 2.5E-06 52.6 11.6 99 136-250 214-322 (365)
373 3d0c_A Dihydrodipicolinate syn 95.7 0.042 1.4E-06 53.3 9.6 85 160-253 30-116 (314)
374 4a29_A Engineered retro-aldol 95.6 0.25 8.4E-06 46.2 14.3 118 166-340 67-184 (258)
375 3i65_A Dihydroorotate dehydrog 95.6 0.095 3.2E-06 52.6 12.3 99 149-250 268-374 (415)
376 2r8w_A AGR_C_1641P; APC7498, d 95.6 0.072 2.5E-06 52.0 11.2 85 160-253 52-139 (332)
377 3b0p_A TRNA-dihydrouridine syn 95.6 0.14 4.9E-06 50.2 13.5 109 133-250 111-225 (350)
378 1xky_A Dihydrodipicolinate syn 95.6 0.13 4.4E-06 49.5 12.8 85 160-253 30-117 (301)
379 3tak_A DHDPS, dihydrodipicolin 95.6 0.062 2.1E-06 51.4 10.4 85 160-253 19-106 (291)
380 4hnl_A Mandelate racemase/muco 95.6 0.092 3.2E-06 52.8 12.2 148 150-338 143-304 (421)
381 1ypf_A GMP reductase; GUAC, pu 95.6 0.081 2.8E-06 51.7 11.4 95 204-336 81-177 (336)
382 2vc6_A MOSA, dihydrodipicolina 95.6 0.23 7.7E-06 47.5 14.3 85 160-253 18-105 (292)
383 3l21_A DHDPS, dihydrodipicolin 95.5 0.14 4.7E-06 49.3 12.7 85 160-253 33-120 (304)
384 1f6k_A N-acetylneuraminate lya 95.5 0.096 3.3E-06 50.1 11.4 85 160-253 21-109 (293)
385 3o1n_A 3-dehydroquinate dehydr 95.5 0.41 1.4E-05 45.4 15.6 90 149-249 38-139 (276)
386 1o5k_A DHDPS, dihydrodipicolin 95.5 0.13 4.5E-06 49.5 12.4 87 159-254 29-118 (306)
387 3g8r_A Probable spore coat pol 95.5 0.66 2.2E-05 45.4 17.3 167 134-359 77-257 (350)
388 1ps9_A 2,4-dienoyl-COA reducta 95.5 0.36 1.2E-05 51.3 17.0 108 135-250 193-310 (671)
389 1zfj_A Inosine monophosphate d 95.4 0.083 2.8E-06 54.1 11.4 81 219-336 222-302 (491)
390 1p0k_A Isopentenyl-diphosphate 95.4 1.1 3.9E-05 43.5 19.2 148 149-336 55-209 (349)
391 3c2e_A Nicotinate-nucleotide p 95.4 0.011 3.9E-07 56.7 4.5 33 307-340 249-281 (294)
392 3l5a_A NADH/flavin oxidoreduct 95.4 0.17 5.7E-06 51.0 13.2 93 148-250 241-346 (419)
393 3si9_A DHDPS, dihydrodipicolin 95.4 0.081 2.8E-06 51.2 10.6 85 160-253 40-127 (315)
394 2yxg_A DHDPS, dihydrodipicolin 95.4 0.13 4.5E-06 49.1 11.9 87 159-254 17-106 (289)
395 3daq_A DHDPS, dihydrodipicolin 95.4 0.17 5.9E-06 48.3 12.8 84 161-253 21-107 (292)
396 3k30_A Histamine dehydrogenase 95.4 0.21 7.3E-06 53.3 14.8 104 137-250 211-324 (690)
397 3flu_A DHDPS, dihydrodipicolin 95.4 0.16 5.4E-06 48.7 12.4 85 160-253 25-112 (297)
398 3paj_A Nicotinate-nucleotide p 95.4 0.14 4.8E-06 49.5 12.0 87 207-339 219-306 (320)
399 3na8_A Putative dihydrodipicol 95.3 0.09 3.1E-06 50.9 10.7 85 160-253 42-129 (315)
400 2hjp_A Phosphonopyruvate hydro 95.3 0.75 2.6E-05 43.9 16.9 186 168-378 27-233 (290)
401 3tqv_A Nicotinate-nucleotide p 95.3 0.062 2.1E-06 51.2 9.2 87 207-339 186-273 (287)
402 2nwr_A 2-dehydro-3-deoxyphosph 95.3 0.27 9.1E-06 46.4 13.4 93 133-252 60-154 (267)
403 2ehh_A DHDPS, dihydrodipicolin 95.3 0.15 5.2E-06 48.7 12.0 85 160-253 18-105 (294)
404 3cpr_A Dihydrodipicolinate syn 95.3 0.17 5.8E-06 48.6 12.3 85 160-253 34-121 (304)
405 2v9d_A YAGE; dihydrodipicolini 95.2 0.14 4.9E-06 50.1 11.9 86 160-254 49-137 (343)
406 3eol_A Isocitrate lyase; seatt 95.2 2.9 9.8E-05 41.9 24.0 101 59-183 61-180 (433)
407 4e8g_A Enolase, mandelate race 95.2 0.41 1.4E-05 47.7 15.3 152 150-364 154-311 (391)
408 1v5x_A PRA isomerase, phosphor 95.2 0.36 1.2E-05 43.6 13.6 162 169-355 14-197 (203)
409 1ep3_A Dihydroorotate dehydrog 95.2 0.16 5.6E-06 48.4 12.0 112 133-250 149-270 (311)
410 1mzh_A Deoxyribose-phosphate a 95.2 0.21 7.2E-06 45.8 12.3 98 133-247 101-201 (225)
411 2z6i_A Trans-2-enoyl-ACP reduc 95.2 0.25 8.6E-06 47.9 13.5 124 149-335 12-136 (332)
412 3b8i_A PA4872 oxaloacetate dec 95.2 0.76 2.6E-05 43.8 16.3 175 138-354 11-203 (287)
413 2hsa_B 12-oxophytodienoate red 95.2 0.51 1.7E-05 47.2 15.9 111 134-250 222-348 (402)
414 3a5f_A Dihydrodipicolinate syn 95.1 0.14 4.8E-06 48.9 11.3 85 160-253 19-106 (291)
415 3s5o_A 4-hydroxy-2-oxoglutarat 95.1 0.17 5.7E-06 48.8 11.9 85 160-253 32-119 (307)
416 3ik4_A Mandelate racemase/muco 95.1 0.7 2.4E-05 45.4 16.7 153 151-364 134-292 (365)
417 2ojp_A DHDPS, dihydrodipicolin 95.1 0.15 5.1E-06 48.7 11.5 85 160-253 19-106 (292)
418 1vhn_A Putative flavin oxidore 95.1 0.048 1.7E-06 52.8 8.0 103 133-250 111-213 (318)
419 2qkf_A 3-deoxy-D-manno-octulos 95.1 0.46 1.6E-05 45.1 14.6 167 133-356 71-266 (280)
420 2nuw_A 2-keto-3-deoxygluconate 95.1 2.4 8.1E-05 40.2 20.0 81 133-227 51-132 (288)
421 1o4u_A Type II quinolic acid p 95.1 0.058 2E-06 51.5 8.2 93 206-341 179-273 (285)
422 2pcq_A Putative dihydrodipicol 95.1 0.3 1E-05 46.4 13.3 156 133-351 49-208 (283)
423 3m5v_A DHDPS, dihydrodipicolin 95.1 0.13 4.3E-06 49.5 10.7 85 160-253 25-113 (301)
424 2rfg_A Dihydrodipicolinate syn 95.1 0.13 4.4E-06 49.3 10.8 85 160-253 18-105 (297)
425 3fkr_A L-2-keto-3-deoxyarabona 95.0 0.13 4.4E-06 49.6 10.8 85 160-253 26-113 (309)
426 4aaj_A N-(5'-phosphoribosyl)an 95.0 0.82 2.8E-05 42.0 15.7 47 307-354 173-223 (228)
427 1icp_A OPR1, 12-oxophytodienoa 95.0 0.18 6.1E-06 50.0 12.0 103 134-250 218-330 (376)
428 1s2w_A Phosphoenolpyruvate pho 95.0 0.42 1.4E-05 45.8 14.1 187 169-378 32-236 (295)
429 4dye_A Isomerase; enolase fami 95.0 0.59 2E-05 46.6 15.8 141 162-364 169-314 (398)
430 3dz1_A Dihydrodipicolinate syn 94.9 0.51 1.7E-05 45.5 14.6 84 160-252 26-111 (313)
431 3fa4_A 2,3-dimethylmalate lyas 94.9 0.69 2.4E-05 44.3 15.3 157 168-355 30-206 (302)
432 3qfe_A Putative dihydrodipicol 94.9 0.07 2.4E-06 51.8 8.4 81 232-341 34-118 (318)
433 3lg3_A Isocitrate lyase; conse 94.8 3.8 0.00013 41.0 23.3 105 58-183 64-187 (435)
434 3aty_A Tcoye, prostaglandin F2 94.8 0.63 2.1E-05 46.1 15.2 98 135-250 229-336 (379)
435 4dxk_A Mandelate racemase / mu 94.8 0.13 4.3E-06 51.5 10.2 152 166-364 157-314 (400)
436 1qpo_A Quinolinate acid phosph 94.7 0.15 5.1E-06 48.6 10.1 91 207-340 182-273 (284)
437 3lye_A Oxaloacetate acetyl hyd 94.7 1.2 4.1E-05 42.7 16.5 157 168-355 37-214 (307)
438 1tv5_A Dhodehase, dihydroorota 94.7 0.32 1.1E-05 49.2 13.1 99 149-250 296-402 (443)
439 1nvm_A HOA, 4-hydroxy-2-oxoval 94.7 1.6 5.3E-05 42.6 17.8 85 160-251 27-114 (345)
440 4h3d_A 3-dehydroquinate dehydr 94.7 1.1 3.9E-05 41.8 16.0 89 149-248 18-118 (258)
441 2gjl_A Hypothetical protein PA 94.7 0.21 7E-06 48.4 11.2 126 149-335 15-144 (328)
442 3q94_A Fructose-bisphosphate a 94.6 3.2 0.00011 39.4 20.0 162 134-342 64-242 (288)
443 3i4e_A Isocitrate lyase; struc 94.6 4.2 0.00014 40.8 22.5 102 58-183 64-187 (439)
444 1pii_A N-(5'phosphoribosyl)ant 94.6 0.78 2.7E-05 46.5 15.6 152 164-372 69-226 (452)
445 3gnn_A Nicotinate-nucleotide p 94.6 0.16 5.6E-06 48.6 9.9 87 207-339 197-284 (298)
446 3l0g_A Nicotinate-nucleotide p 94.5 0.19 6.6E-06 48.0 10.1 87 207-339 195-282 (300)
447 4ef8_A Dihydroorotate dehydrog 94.4 0.27 9.3E-06 48.3 11.5 114 133-250 178-306 (354)
448 2ffc_A Orotidine 5-monophospha 94.4 1.1 3.9E-05 43.8 15.8 61 292-359 280-349 (353)
449 3b4u_A Dihydrodipicolinate syn 94.4 0.17 5.8E-06 48.4 9.7 85 160-253 21-108 (294)
450 3eb2_A Putative dihydrodipicol 94.3 0.13 4.6E-06 49.3 8.9 85 160-253 22-109 (300)
451 2nuw_A 2-keto-3-deoxygluconate 94.3 0.33 1.1E-05 46.2 11.5 84 160-253 17-101 (288)
452 3gk0_A PNP synthase, pyridoxin 94.3 2.9 9.8E-05 39.2 17.3 135 165-342 55-189 (278)
453 1m5w_A Pyridoxal phosphate bio 94.2 2.9 0.0001 38.4 17.0 136 165-343 27-162 (243)
454 1aj0_A DHPS, dihydropteroate s 94.1 0.17 5.7E-06 48.3 9.0 77 161-247 36-114 (282)
455 2ze3_A DFA0005; organic waste 94.1 1.8 6.1E-05 40.9 16.1 177 168-378 28-230 (275)
456 2tps_A Protein (thiamin phosph 94.1 0.53 1.8E-05 42.5 12.1 109 165-337 33-144 (227)
457 3r12_A Deoxyribose-phosphate a 94.0 0.67 2.3E-05 43.4 12.6 109 124-247 133-242 (260)
458 4a35_A Mitochondrial enolase s 94.0 1.2 4E-05 45.1 15.5 158 150-364 188-352 (441)
459 3ngj_A Deoxyribose-phosphate a 94.0 0.4 1.4E-05 44.4 11.0 104 131-249 124-228 (239)
460 2yci_X 5-methyltetrahydrofolat 94.0 0.12 4.3E-06 48.9 7.7 70 162-247 33-104 (271)
461 4dpp_A DHDPS 2, dihydrodipicol 94.0 0.51 1.7E-05 46.5 12.3 85 160-253 77-164 (360)
462 3sr7_A Isopentenyl-diphosphate 93.9 0.92 3.2E-05 44.7 14.2 146 149-336 86-237 (365)
463 2r91_A 2-keto-3-deoxy-(6-phosp 93.9 0.59 2E-05 44.4 12.4 85 160-254 16-101 (286)
464 3nav_A Tryptophan synthase alp 93.9 0.26 8.9E-06 46.6 9.7 137 205-364 6-152 (271)
465 1f8m_A Isocitrate lyase, ICL; 93.9 5.9 0.0002 39.7 20.1 101 59-183 65-183 (429)
466 3eeg_A 2-isopropylmalate synth 93.8 0.77 2.6E-05 44.5 13.3 164 140-338 60-232 (325)
467 1ydn_A Hydroxymethylglutaryl-C 93.8 1.9 6.5E-05 40.8 16.0 158 160-355 23-194 (295)
468 3h5d_A DHDPS, dihydrodipicolin 93.8 0.45 1.5E-05 45.8 11.5 85 160-253 25-113 (311)
469 1gox_A (S)-2-hydroxy-acid oxid 93.7 1 3.5E-05 44.4 14.1 160 149-337 71-254 (370)
470 4dpp_A DHDPS 2, dihydrodipicol 93.7 0.21 7.1E-06 49.2 8.9 82 232-342 82-167 (360)
471 1sfl_A 3-dehydroquinate dehydr 93.7 1.4 4.9E-05 40.6 14.3 86 151-248 5-102 (238)
472 1ydn_A Hydroxymethylglutaryl-C 93.7 1.2 4.1E-05 42.3 14.2 98 139-250 125-231 (295)
473 2ftp_A Hydroxymethylglutaryl-C 93.7 2.1 7.2E-05 40.8 15.9 158 160-355 27-198 (302)
474 2ekc_A AQ_1548, tryptophan syn 93.6 0.62 2.1E-05 43.6 11.7 136 206-364 4-149 (262)
475 1w3i_A EDA, 2-keto-3-deoxy glu 93.5 0.69 2.4E-05 44.1 12.2 85 160-254 17-102 (293)
476 3kts_A Glycerol uptake operon 93.5 0.44 1.5E-05 42.6 10.0 88 140-252 94-181 (192)
477 1o94_A Tmadh, trimethylamine d 93.5 0.82 2.8E-05 49.2 14.1 109 137-250 203-321 (729)
478 1gvf_A Tagatose-bisphosphate a 93.5 5.2 0.00018 37.9 19.5 164 133-342 59-238 (286)
479 1f6y_A 5-methyltetrahydrofolat 93.5 0.2 6.7E-06 47.2 8.1 71 161-247 23-95 (262)
480 4djd_D C/Fe-SP, corrinoid/iron 93.3 4.3 0.00015 39.2 17.4 204 71-360 83-320 (323)
481 2cw6_A Hydroxymethylglutaryl-C 93.3 1.9 6.6E-05 41.0 14.9 101 135-249 122-231 (298)
482 3vav_A 3-methyl-2-oxobutanoate 93.3 2.3 7.7E-05 40.2 14.9 83 168-252 41-128 (275)
483 2ftp_A Hydroxymethylglutaryl-C 93.2 1.6 5.4E-05 41.7 14.2 104 133-250 119-235 (302)
484 1vrd_A Inosine-5'-monophosphat 93.1 0.26 9.1E-06 50.4 9.1 71 230-336 236-306 (494)
485 3o1n_A 3-dehydroquinate dehydr 93.1 1.6 5.4E-05 41.3 13.8 104 133-252 82-198 (276)
486 4h1z_A Enolase Q92ZS5; dehydra 93.1 2.1 7.1E-05 42.7 15.5 152 151-363 178-334 (412)
487 2nli_A Lactate oxidase; flavoe 93.1 1.4 4.6E-05 43.5 13.9 160 149-336 80-257 (368)
488 3oix_A Putative dihydroorotate 93.0 0.96 3.3E-05 44.2 12.5 111 133-250 178-304 (345)
489 2hmc_A AGR_L_411P, dihydrodipi 92.9 0.86 2.9E-05 44.5 12.0 85 160-254 44-129 (344)
490 1nvm_A HOA, 4-hydroxy-2-oxoval 92.9 1.4 4.7E-05 43.0 13.4 99 138-250 124-226 (345)
491 1vcf_A Isopentenyl-diphosphate 92.8 0.54 1.9E-05 45.5 10.4 104 136-251 170-286 (332)
492 1eep_A Inosine 5'-monophosphat 92.8 0.46 1.6E-05 47.4 10.0 79 220-335 143-221 (404)
493 2v5j_A 2,4-dihydroxyhept-2-ENE 92.8 6.7 0.00023 37.1 18.4 143 149-338 89-260 (287)
494 3ble_A Citramalate synthase fr 92.8 0.42 1.5E-05 46.5 9.5 175 120-336 54-245 (337)
495 1p4c_A L(+)-mandelate dehydrog 92.8 2.8 9.6E-05 41.4 15.6 159 149-336 72-253 (380)
496 1xi3_A Thiamine phosphate pyro 92.7 1.3 4.5E-05 39.3 12.2 107 164-337 27-136 (215)
497 2qiw_A PEP phosphonomutase; st 92.7 1.9 6.6E-05 40.2 13.6 100 138-251 10-114 (255)
498 3oa3_A Aldolase; structural ge 92.6 1.7 5.7E-05 41.4 13.0 106 131-248 155-261 (288)
499 2nx9_A Oxaloacetate decarboxyl 92.6 7.3 0.00025 39.5 18.8 165 120-336 42-233 (464)
500 1eye_A DHPS 1, dihydropteroate 92.6 0.59 2E-05 44.4 10.0 76 161-247 27-104 (280)
No 1
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=100.00 E-value=4.6e-59 Score=464.22 Aligned_cols=316 Identities=22% Similarity=0.250 Sum_probs=271.7
Q ss_pred cccCCCCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK 116 (422)
Q Consensus 37 ~~~~~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~ 116 (422)
..++..++++|+++|+|++|+|||++|||+++++.+.++.+.++|||+||+||+|.++ |.+|+.||+++++. +.
T Consensus 27 ~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~p-q~GNp~PR~~~~~~-----~~ 100 (354)
T 4ef8_A 27 GQQMGRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPAL-REGNPTPRYQALPL-----GS 100 (354)
T ss_dssp -------CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSC-BCCSCSCCEEEETT-----EE
T ss_pred hhhcCCCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcc-cCCCCCCcEEecch-----hh
Confidence 3445678899999999999999999999999999999999999999999999999987 79999999999875 34
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHH---HhCCCEEEEccCCCCCCCcc
Q 014581 117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVE---ETGIDAIEVNFSCPHGMPER 193 (422)
Q Consensus 117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~---~aGaD~iElN~scP~~~~~~ 193 (422)
.|++||+|.+ ++.|+++++++++ +++.|+++||. +.++++|.+++++++ ++|+|+||||+||||+..
T Consensus 101 iN~~G~~n~G------~~~~~~~l~~~~~-~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g-- 170 (354)
T 4ef8_A 101 INSMGLPNNG------FDFYLAYAAEQHD-YGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG-- 170 (354)
T ss_dssp EECCCCCBCC------HHHHHHHHHHTCC-TTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT--
T ss_pred hccCCCCCcC------HHHHHHHHHHHhh-cCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC--
Confidence 8999999988 8999999987763 45789999996 688999999999998 568999999999999742
Q ss_pred ccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC--hHHHHHHHHHcC-CCEEEEecCCcccccccccCCCCCCCC
Q 014581 194 KMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD--ITEPARVALRSG-SEGVSAINTIMSVMGIDLKTLRPEPCV 270 (422)
Q Consensus 194 ~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~--~~~~a~~l~~aG-adgi~v~n~~~~~~~id~e~~~p~~~~ 270 (422)
|.+++++++.+.++++++++.+++||+||++|+++. +.++++.+.++| +|+|+++||+...+.||+++.++...
T Consensus 171 --g~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~- 247 (354)
T 4ef8_A 171 --KPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIK- 247 (354)
T ss_dssp --SCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCS-
T ss_pred --chhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccc-
Confidence 557778999999999999999999999999999742 344555666898 99999999985456778776655321
Q ss_pred CCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHH
Q 014581 271 EGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 271 ~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i 350 (422)
.....||+||++++|.++++|+++++... ++|||++|||.+++|+.+++++|||+||+||+++++||+++++|
T Consensus 248 -~~~~~gGlSG~~i~p~a~~~i~~v~~~~~------~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i 320 (354)
T 4ef8_A 248 -PKQGFGGLGGRYVLPTALANINAFYRRCP------GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERL 320 (354)
T ss_dssp -GGGGEEEEEGGGGHHHHHHHHHHHHHHCT------TSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHH
T ss_pred -cccccCCCCCCCCchHHHHHHHHHHHhCC------CCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHH
Confidence 01246999999999999999999998742 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCHHHhhcCCcccCC
Q 014581 351 CEELKDFMKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 351 ~~~l~~~m~~~G~~si~d~~G~~~~~~~ 378 (422)
.++|++||+++||+|++|++|....+-.
T Consensus 321 ~~~l~~~m~~~G~~si~el~G~~~~~~~ 348 (354)
T 4ef8_A 321 TSELLGVMAKKRYQTLDEFRGKVRTLDG 348 (354)
T ss_dssp HHHHHHHHHHHTCCSGGGTTTCCBCC--
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHhcCCC
Confidence 9999999999999999999998665433
No 2
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=100.00 E-value=6.6e-58 Score=454.75 Aligned_cols=309 Identities=24% Similarity=0.297 Sum_probs=268.8
Q ss_pred CCCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 41 ASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 41 ~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
..+|++|+++++|++|+|||++|||+++++.+.++.+.++|||+||+||+|.++ |.+|++||+++++.+ ..|++
T Consensus 32 ~~~m~~L~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~p-q~gnp~PR~~~~~~~-----~iN~~ 105 (345)
T 3oix_A 32 RGSMVSTHTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEE-RAGNPQPRYADTKLG-----SINSM 105 (345)
T ss_dssp ----CCCCEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSC-BCCSCSCCEEECSSE-----EEECC
T ss_pred ccccCCcCeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCC-CCCCCCCcEEecccc-----hhccC
Confidence 356789999999999999999999999889999999999999999999999987 799999999998753 48999
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC-EEEEccCCCCCCCcccccccc
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID-AIEVNFSCPHGMPERKMGAAV 199 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD-~iElN~scP~~~~~~~~G~~l 199 (422)
||+|.+ ++.|++++++.++...+.|+++||+ +.++++|.+++++++++|+| +||||+||||+. .+.++
T Consensus 106 G~~n~G------~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G~~~l 174 (345)
T 3oix_A 106 GLPNLG------INYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNVP----GXPQI 174 (345)
T ss_dssp CCCBSC------HHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----TCCCG
T ss_pred CCCChh------HHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----Cchhh
Confidence 999998 8999999987654334899999997 68999999999999988876 999999999974 24677
Q ss_pred ccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcc-cccccccCCCCCCCCCCCCccCC
Q 014581 200 GQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS-VMGIDLKTLRPEPCVEGYSTPGG 278 (422)
Q Consensus 200 ~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~-~~~id~e~~~p~~~~~~~~~~gG 278 (422)
+++++.+.++++++++.+++||+||++|+ .+..++++.+.++|+++|+++|++.. .+.+++++.++... .....||
T Consensus 175 ~~~~e~l~~il~av~~~~~~PV~vKi~p~-~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~--~~~~~gG 251 (345)
T 3oix_A 175 AYDFETTDQILSEVFTYFTKPLGIKLPPY-FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIX--PKNGFGG 251 (345)
T ss_dssp GGCHHHHHHHHHHHTTTCCSCEEEEECCC-CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCS--GGGGEEE
T ss_pred cCCHHHHHHHHHHHHHHhCCCeEEEECCC-CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccc--cccccCC
Confidence 89999999999999999999999999999 47899999999999998888877632 13455555444321 0134689
Q ss_pred CCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHH
Q 014581 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358 (422)
Q Consensus 279 ~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m 358 (422)
+||++++|.++++|+++++.+++ ++|||++|||.|++|+.+++++|||+||+||++++.||+++++++++|++||
T Consensus 252 lSG~ai~p~a~~~v~~i~~~~~~-----~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~~~l 326 (345)
T 3oix_A 252 IGGDYVKPTALANVHAFYKRLNP-----SIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKELXAIM 326 (345)
T ss_dssp EEEGGGHHHHHHHHHHHHTTSCT-----TSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHH
T ss_pred cCCccccHHHHHHHHHHHHHcCC-----CCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHHHHH
Confidence 99999999999999999998743 6999999999999999999999999999999988888999999999999999
Q ss_pred HHcCCCCHHHhhcCCc
Q 014581 359 KMHNFSSIEDFRGASI 374 (422)
Q Consensus 359 ~~~G~~si~d~~G~~~ 374 (422)
+++||++++|++|...
T Consensus 327 ~~~G~~si~e~~G~~~ 342 (345)
T 3oix_A 327 TEKGYETLEDFRGKLN 342 (345)
T ss_dssp HHHTCCSGGGTTTCCB
T ss_pred HHcCCCCHHHHHhHHh
Confidence 9999999999999754
No 3
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=100.00 E-value=2.9e-56 Score=449.62 Aligned_cols=319 Identities=18% Similarity=0.242 Sum_probs=268.9
Q ss_pred CCCCCceeeEeeecccCC-----CCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCC
Q 014581 24 GLRLPSRIGLRVLASDSA-----SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI 98 (422)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~-----~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~ 98 (422)
|.+..|++++..++..+. .+.+.|+|+++|++|+|||++|||++ ++++.+..+.++|||++++||+|.+| |.|
T Consensus 56 dpE~aH~l~~~~~~~~~~~~~~~~~~~~l~v~~~Gl~f~NPvglAAG~d-k~~~~~~~l~~lGfG~vevgtvT~~p-q~G 133 (415)
T 3i65_A 56 DGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGFD-KNGVCIDSILKLGFSFIEIGTITPRG-QTG 133 (415)
T ss_dssp CHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTSS-TTCSSHHHHHTTTCSEEEEEEECSSC-BCC
T ss_pred CHHHHHHHHHHHHHhcCCCcccccccccccEEECCEECCCCCEECCCCC-CCHHHHHHHHHcCCCeEEeCcccCCc-CCC
Confidence 445556655554432211 24556899999999999999999998 78888999999999999999999998 899
Q ss_pred CCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC------CCeEEEEeCCCCC-----HHHHHH
Q 014581 99 NVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP------DKILIASIMEEYN-----KAAWEE 167 (422)
Q Consensus 99 ~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~------~~pvi~si~~~~~-----~~~~~~ 167 (422)
|+.||+++++++. +..|++||+|.| ++.|++++++.++.++ ..|+++||+ +.. .++|.+
T Consensus 134 Np~PRlfrl~e~~---aiiN~~GfnN~G------~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg-~nk~t~~~~~Dy~~ 203 (415)
T 3i65_A 134 NAKPRIFRDVESR---SIINSCGFNNMG------CDKVTENLILFRKRQEEDKLLSKHIVGVSIG-KNKDTVNIVDDLKY 203 (415)
T ss_dssp SCSCCEEEEGGGT---EEEECCCSCBCC------HHHHHHHHHHHHHHHTTCGGGTTCEEEEEEC-CCTTCSCHHHHHHH
T ss_pred CCCCeEEeccCCC---ceeecCCCCchh------HHHHHHHHHHHHhhccccccccCceEEEEec-cccCccccHHHHHH
Confidence 9999999987643 569999999999 8999999887665332 468999996 333 689999
Q ss_pred HHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc--------------------cCcc-EEEEEC
Q 014581 168 LIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK--------------------ATVP-VWAKMT 226 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~--------------------~~iP-v~vKl~ 226 (422)
+++++.+. +|+||||+||||+. |..+.++++.+.+++++|++. .++| |+||++
T Consensus 204 ~a~~l~~~-ad~ieiNiScPNt~-----Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~ 277 (415)
T 3i65_A 204 CINKIGRY-ADYIAINVSSPNTP-----GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA 277 (415)
T ss_dssp HHHHHGGG-CSEEEEECCCCC-------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC
T ss_pred HHHHHHhh-CCEEEEECCCCCCC-----CcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec
Confidence 99999886 99999999999984 455679999999999999875 3689 999999
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
|+++ ++.++|+.++++|+|+|+++||+.. .+|+++.. ...||+||++++|.++++|+++++.+.+
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~--r~dl~~~~--------~~~GGlSG~a~~p~al~~I~~v~~~v~~--- 344 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQ--INDIKSFE--------NKKGGVSGAKLKDISTKFICEMYNYTNK--- 344 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSC--CCCCGGGT--------TCCSEEEEGGGHHHHHHHHHHHHHHTTT---
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcc--cccccccc--------cccCCcCCccchHHHHHHHHHHHHHhCC---
Confidence 9988 4789999999999999999999865 34554421 2469999999999999999999998853
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
++|||++|||.|++|+.+++++|||+||+||+++++||+++++|+++|++||+++||+|++|++|.+++
T Consensus 345 --~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~~G~~si~e~~G~~~~ 413 (415)
T 3i65_A 345 --QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS 413 (415)
T ss_dssp --CSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCSSSTTTTTTTCC
T ss_pred --CCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHHcCCCCHHHHhChhcc
Confidence 799999999999999999999999999999999999999999999999999999999999999998765
No 4
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=100.00 E-value=6e-55 Score=437.48 Aligned_cols=304 Identities=23% Similarity=0.280 Sum_probs=261.5
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccc
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG 121 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~G 121 (422)
.++++|+++++|++|+|||++|||++ ++++.++.+.++|||+|++||+|.++ |.||+.||+++++++. +..|++|
T Consensus 45 ~~~~~L~~~~~Gl~~~NPvglAaG~~-~~~~~~~~~~~~g~G~v~~ktvt~~p-q~GNp~PR~~~~~~~~---~~iN~~G 119 (367)
T 3zwt_A 45 QDSDMLEVRVLGHKFRNPVGIAAGFD-KHGEAVDGLYKMGFGFVEIGSVTPKP-QEGNPRPRVFRLPEDQ---AVINRYG 119 (367)
T ss_dssp CCCGGGCEEETTEEESSSEEECTTSS-TTSSSHHHHHHTTCSEEEEEEECSSC-BCCSCSCCEEEEGGGT---EEEECCC
T ss_pred CCCCCCcEEECCEEcCCCCEeCCCcC-CCHHHHHHHHhcCcCeEEeCCccCCC-CCCCCCCeEEEecCcc---ceeeccC
Confidence 56789999999999999999999988 78888999999999999999999988 8999999999998643 5699999
Q ss_pred cccccccCCChHHHHHHHHHHH-Hh--hC--CCCeEEEEeCCC----CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCc
Q 014581 122 WENIELISDRPLETMLKEFKQL-KA--LY--PDKILIASIMEE----YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE 192 (422)
Q Consensus 122 l~n~~~~s~~~~e~~l~~i~~~-k~--~~--~~~pvi~si~~~----~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~ 192 (422)
|+|.| ++.|++++++. ++ .+ .+.|+++||++. .+.++|.++++++.+ ++|+||||+||||+.
T Consensus 120 ~~N~G------~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~-- 190 (367)
T 3zwt_A 120 FNSHG------LSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA-- 190 (367)
T ss_dssp CCBCC------HHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST--
T ss_pred CCCcc------HHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC--
Confidence 99998 89998887652 21 01 267999999742 257888888888876 599999999999984
Q ss_pred cccccccccChhHHHHHHHHHhhc-------cCccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccC
Q 014581 193 RKMGAAVGQDCRLLEEVCGWINAK-------ATVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKT 263 (422)
Q Consensus 193 ~~~G~~l~~~~~~v~~iv~~vr~~-------~~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~ 263 (422)
|..+.++++.+.++++++++. +++||+||++|+++ ++.++|+.++++|+|+|+++||+.++.. .
T Consensus 191 ---G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~----~ 263 (367)
T 3zwt_A 191 ---GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPA----G 263 (367)
T ss_dssp ---TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCT----T
T ss_pred ---CccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCccccc----c
Confidence 234568899999999999764 68999999999987 5788999999999999999999854321 1
Q ss_pred CCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhh
Q 014581 264 LRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343 (422)
Q Consensus 264 ~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~G 343 (422)
.++.. ....||+||++++|.++++|+++++.+++ ++|||++|||.|++|+.+++++|||+||+||+++++|
T Consensus 264 ~~~~~----~~~~gGlSG~~i~p~a~~~v~~i~~~v~~-----~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~g 334 (367)
T 3zwt_A 264 LQGAL----RSETGGLSGKPLRDLSTQTIREMYALTQG-----RVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWG 334 (367)
T ss_dssp CCCTT----TTSSSEEEEGGGHHHHHHHHHHHHHHTTT-----CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHC
T ss_pred ccccc----ccccCCcCCcccchhHHHHHHHHHHHcCC-----CceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcC
Confidence 12211 12468999999999999999999999853 7999999999999999999999999999999999989
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 344 p~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
|++++++.++|++||+++||+|++|++|.+++
T Consensus 335 P~~~~~i~~~l~~~m~~~G~~~i~e~~G~~~~ 366 (367)
T 3zwt_A 335 PPVVGKVKRELEALLKEQGFGGVTDAIGADHR 366 (367)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSHHHHTTGGGT
T ss_pred cHHHHHHHHHHHHHHHHcCCCCHHHhhCcccc
Confidence 99999999999999999999999999998764
No 5
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=100.00 E-value=7.6e-54 Score=429.46 Aligned_cols=309 Identities=23% Similarity=0.260 Sum_probs=256.7
Q ss_pred CCCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 41 ASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 41 ~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
...+++|+|+++|++|+|||++|||+.+++.+.++.+.++|||+|++||+|.++ |.||++||+++++.+. .|++
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~p-q~GNp~PR~~~l~~~~-----iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPAL-REGNPTPRYQALPLGS-----INSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSC-BCCSCSCCEEEETTEE-----EECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCccc-ccCCCCCeEEEccccc-----cccc
Confidence 356789999999999999999999977799999999999999999999999987 8999999999997754 8999
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHh---CCCEEEEccCCCCCCCcccccc
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET---GIDAIEVNFSCPHGMPERKMGA 197 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~a---GaD~iElN~scP~~~~~~~~G~ 197 (422)
||+|.+ .+.|++.+++.++. .+.|+++||. +.++++|.+.++++++. ++|+||||+||||++. +.
T Consensus 105 G~~n~G------~~~~~~~~~~~~~~-~~~pvivsi~-g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g----~~ 172 (354)
T 3tjx_A 105 GLPNNG------FDFYLAYAAEQHDY-GKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG----KP 172 (354)
T ss_dssp CCCBCC------HHHHHHHHHHTCCT-TTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECC------------
T ss_pred ccCCHH------HHHHHHHHHHhhcc-CCceEEEEEe-cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcc----hh
Confidence 999998 89999888765543 4789999997 67888888888777643 7999999999999853 34
Q ss_pred ccccChhHHHHHHHHHhhccCccEEEEECCCCCCh--HHHHHHHHHc-CCCEEEEecCCcccccccccCCCCCCCCCCCC
Q 014581 198 AVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI--TEPARVALRS-GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274 (422)
Q Consensus 198 ~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~--~~~a~~l~~a-Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~ 274 (422)
.+..+++.+.++++++++.+++|+.+|++|++++. ...+..+.+. ++++++.+|++...+.+|.++.++... ...
T Consensus 173 ~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~--~~~ 250 (354)
T 3tjx_A 173 QVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIK--PKQ 250 (354)
T ss_dssp -CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCS--GGG
T ss_pred hhccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheeccccccccccccccccccc--Ccc
Confidence 56678999999999999999999999999998753 3344445554 456677777765445667666544322 223
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
..||+||++++|.++++|+++++.+. ++|||++|||.|++||+++|++|||+||+||+++++||+++++|+++|
T Consensus 251 ~~GGlSG~~~~~~a~~~v~~~~~~~~------~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L 324 (354)
T 3tjx_A 251 GFGGLGGRYVLPTALANINAFYRRCP------GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp GEEEEEGGGGHHHHHHHHHHHHHHCT------TSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred cccccCchhhHHHHHHHHHHHHHhcC------CCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHH
Confidence 46999999999999999999988764 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCHHHhhcCCcc
Q 014581 355 KDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 355 ~~~m~~~G~~si~d~~G~~~~ 375 (422)
++||+++||+|++|++|....
T Consensus 325 ~~~L~~~G~~si~e~~G~~~~ 345 (354)
T 3tjx_A 325 LGVMAKKRYQTLDEFRGKVRT 345 (354)
T ss_dssp HHHHHHHTCCSGGGTTTCCBC
T ss_pred HHHHHHcCCCCHHHHhChhhc
Confidence 999999999999999998653
No 6
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=100.00 E-value=1.4e-50 Score=413.43 Aligned_cols=300 Identities=19% Similarity=0.267 Sum_probs=258.3
Q ss_pred CCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccccc
Q 014581 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGW 122 (422)
Q Consensus 43 ~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl 122 (422)
+...|+++++|++|+|||++|||++ ++++.++.+.+.|||+|++||+|.++ |.||+.||++++.++. +..|++||
T Consensus 78 ~~~~l~~~i~Gl~~~NPvglAAG~d-k~~~~~~~l~~~GfG~v~~gtvT~~p-q~GNp~PR~~rl~e~~---~iiN~~Gf 152 (443)
T 1tv5_A 78 DSIYACTNIKHLDFINPFGVAAGFD-KNGVCIDSILKLGFSFIEIGTITPRG-QTGNAKPRIFRDVESR---SIINSCGF 152 (443)
T ss_dssp CCGGGCEEETTEEESSSEEECTTTT-TTCSSHHHHHTTTCSEEEEEEECSSC-BCCSCSCCEEEETTTT---EEEECCCS
T ss_pred CCccCCeEECCEEeCCCcEECCccc-CccHHHHHHHhcCCCEEEEeeeecCC-CCCCCCccEEeccccc---eeeecccc
Confidence 3446799999999999999999998 67777888999999999999999987 8999999999887643 56899999
Q ss_pred ccccccCCChHHHHHHHHHHHHhhC------CCCeEEEEeCCCCC-----HHHHHHHHHHHHHhCCCEEEEccCCCCCCC
Q 014581 123 ENIELISDRPLETMLKEFKQLKALY------PDKILIASIMEEYN-----KAAWEELIDRVEETGIDAIEVNFSCPHGMP 191 (422)
Q Consensus 123 ~n~~~~s~~~~e~~l~~i~~~k~~~------~~~pvi~si~~~~~-----~~~~~~~a~~~~~aGaD~iElN~scP~~~~ 191 (422)
+|.| .+.+++.+++.++.. +..|+++||++ .. .++|.++++++.+ ++|+||||+||||+.
T Consensus 153 nN~G------~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~-~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~- 223 (443)
T 1tv5_A 153 NNMG------CDKVTENLILFRKRQEEDKLLSKHIVGVSIGK-NKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP- 223 (443)
T ss_dssp CBSC------HHHHHHHHHHHHHHHHHCSTTTTCEEEEEECC-CTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST-
T ss_pred CChh------HHHHHHHHHHHhhhcccccccCCceEEEEecC-cccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc-
Confidence 9998 788888887654321 24689999974 33 7888888888877 799999999999984
Q ss_pred ccccccccccChhHHHHHHHHHhhc--------------------------------------------------cCcc-
Q 014581 192 ERKMGAAVGQDCRLLEEVCGWINAK--------------------------------------------------ATVP- 220 (422)
Q Consensus 192 ~~~~G~~l~~~~~~v~~iv~~vr~~--------------------------------------------------~~iP- 220 (422)
|....++++.+.+++++|+++ .++|
T Consensus 224 ----Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 299 (443)
T 1tv5_A 224 ----GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPL 299 (443)
T ss_dssp ----TGGGGGSHHHHHHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCE
T ss_pred ----ccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCe
Confidence 345568899999999999864 3689
Q ss_pred EEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 221 VWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 221 v~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
|+||++|+++ ++.++|+.++++|+|+|+++||+.. .+|+++.. ...||+||++++|.++++++++++.
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~--~~d~~~~~--------~~~GGlSG~~~~~~sl~~i~~v~~~ 369 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ--INDIKSFE--------NKKGGVSGAKLKDISTKFICEMYNY 369 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC--CCCCGGGT--------TCCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc--cccccccc--------cccCCcCCCcchHHHHHHHHHHHHH
Confidence 9999999987 6788999999999999999999864 34443211 2468999999999999999999998
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
+.+ ++|||++|||.|++|+.+++++|||+||+||+++++||++++++++++..||+++||+|++|++|..++
T Consensus 370 v~~-----~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~~si~e~~G~~~~ 441 (443)
T 1tv5_A 370 TNK-----QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS 441 (443)
T ss_dssp TTT-----CSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSSSGGGTTTTC-
T ss_pred cCC-----CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCCCCHHHHhhhhcc
Confidence 753 799999999999999999999999999999999998899999999999999999999999999998753
No 7
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=3.7e-50 Score=395.79 Aligned_cols=304 Identities=24% Similarity=0.316 Sum_probs=261.7
Q ss_pred cceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccccccccc
Q 014581 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIE 126 (422)
Q Consensus 47 L~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~ 126 (422)
|+++++|++|+|||++|||+.+++.+.++.+.+.|+|++++||++.++ +.+|+.||+++++.+ ..|++||+|.+
T Consensus 2 l~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~-~~gn~~pr~~~~~~~-----~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEK-REGNPLPRYVDLELG-----SINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSC-BCCSCSCCEEEETTE-----EEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcc-cCCCCCCcEEecccc-----eeecCCCCCcc
Confidence 789999999999999999996688999999999999999999999987 679999999988753 48899999887
Q ss_pred ccCCChHHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC-EEEEccCCCCCCCccccccccccChh
Q 014581 127 LISDRPLETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGID-AIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 127 ~~s~~~~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD-~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
.+.+++.+++.++.+ ++.|+++|+. +.++++|.+++++++++|+| +||||++||+.. + +..++.+++
T Consensus 76 ------~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~--g--~~~~g~~~e 144 (311)
T 1jub_A 76 ------FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVP--G--EPQLAYDFE 144 (311)
T ss_dssp ------HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSS--S--CCCGGGCHH
T ss_pred ------HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCC--C--cccccCCHH
Confidence 788888888766444 3789999997 67899999999999999999 999999999972 1 345667899
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
.+.++++++|+.+++||++|++++++ ++.++++.+.++|+|+|+++|++...+.+|.++.++... .....||++|+
T Consensus 145 ~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~--~~~~~gG~sg~ 222 (311)
T 1jub_A 145 ATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIK--PKDGFGGIGGA 222 (311)
T ss_dssp HHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCS--GGGGEEEEESG
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccc--cCCCCCccccc
Confidence 99999999999999999999999874 355678999999999999999874334456544333211 01245889999
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcC
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G 362 (422)
+++|.+++.++++++.+++ ++|||++|||.+++|+.+++++|||+||+||+++.+||++++++.++++.||+++|
T Consensus 223 ~~~~~~~~~i~~v~~~~~~-----~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~~g 297 (311)
T 1jub_A 223 YIKPTALANVRAFYTRLKP-----EIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKG 297 (311)
T ss_dssp GGHHHHHHHHHHHHTTSCT-----TSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHhcCC-----CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHHcC
Confidence 9999999999999887642 79999999999999999999999999999999998779999999999999999999
Q ss_pred CCCHHHhhcCCc
Q 014581 363 FSSIEDFRGASI 374 (422)
Q Consensus 363 ~~si~d~~G~~~ 374 (422)
|+|++|++|...
T Consensus 298 ~~si~e~~g~~~ 309 (311)
T 1jub_A 298 YQSIADFHGKLK 309 (311)
T ss_dssp CCSGGGTTTCCB
T ss_pred CCCHHHHhChhh
Confidence 999999999764
No 8
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=100.00 E-value=1.6e-49 Score=391.76 Aligned_cols=305 Identities=25% Similarity=0.309 Sum_probs=261.5
Q ss_pred CCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccc
Q 014581 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWE 123 (422)
Q Consensus 44 ~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~ 123 (422)
|+||+++++|++|+|||++|||+.+++.+.++.+.+.|+|++++||++.++ +.+|+.||+++++.+. .|++|++
T Consensus 1 ~~dl~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~-~~gn~~pr~~~~~~~~-----in~~g~~ 74 (314)
T 2e6f_A 1 MMCLKLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAP-RDGNPEPRYMAFPLGS-----INSMGLP 74 (314)
T ss_dssp -CCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSC-BCCSCSCCEEEETTEE-----EECCCCC
T ss_pred CCCcceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcc-cCCCCCCcEEecccce-----eecCCCC
Confidence 468999999999999999999996578999999999999999999999987 6799999999887543 7888998
Q ss_pred cccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC---EEEEccCCCCCCCccccccccc
Q 014581 124 NIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID---AIEVNFSCPHGMPERKMGAAVG 200 (422)
Q Consensus 124 n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD---~iElN~scP~~~~~~~~G~~l~ 200 (422)
|.+ .+.|++.+++.+ .+++.|+++||. +.+.++|.+++++++++|+| +||||++||+.. + +..++
T Consensus 75 ~~g------~~~~~~~~~~~~-~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~--g--~~~~g 142 (314)
T 2e6f_A 75 NLG------FDFYLKYASDLH-DYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVP--G--KPQVA 142 (314)
T ss_dssp BSC------HHHHHHHHHHTC-CTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCST--T--CCCGG
T ss_pred CcC------HHHHHHHHHHHh-hcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCC--C--chhhc
Confidence 877 788888776553 345889999997 67899999999999999999 999999999972 2 34566
Q ss_pred cChhHHHHHHHHHhhccCccEEEEECCCCC--ChHHHHHHHHHcC-CCEEEEecCCcccccccccCCCCCCCCCCCCccC
Q 014581 201 QDCRLLEEVCGWINAKATVPVWAKMTPNIT--DITEPARVALRSG-SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277 (422)
Q Consensus 201 ~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~--~~~~~a~~l~~aG-adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~g 277 (422)
.+++.+.++++++|+.+++||+||++++++ ++.++++.+.++| +|+|+++|++...+.+|.++.++... .....+
T Consensus 143 ~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~--~~~~~g 220 (314)
T 2e6f_A 143 YDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIK--PKQGFG 220 (314)
T ss_dssp GSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCC--GGGGEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccc--cCcCCC
Confidence 788999999999999889999999999875 4567799999999 99999999874334455444333211 112457
Q ss_pred CCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHH
Q 014581 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357 (422)
Q Consensus 278 G~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~ 357 (422)
|++|++++|.+++.++++++.++ ++|||++|||.|++|+.+++++|||+||+||+++.++|++++++.++++.|
T Consensus 221 G~sg~~~~p~~~~~i~~v~~~~~------~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~~~ 294 (314)
T 2e6f_A 221 GLGGKYILPTALANVNAFYRRCP------DKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEI 294 (314)
T ss_dssp EEESGGGHHHHHHHHHHHHHHCT------TSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHHHHH
T ss_pred ccCcccccHHHHHHHHHHHHhcC------CCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHHHHH
Confidence 89999999999999999998862 799999999999999999999999999999999986799999999999999
Q ss_pred HHHcCCCCHHHhhcCCc
Q 014581 358 MKMHNFSSIEDFRGASI 374 (422)
Q Consensus 358 m~~~G~~si~d~~G~~~ 374 (422)
|+++||+|++|++|...
T Consensus 295 ~~~~g~~~i~~~~g~~~ 311 (314)
T 2e6f_A 295 MARKGYRTLEEFRGRVK 311 (314)
T ss_dssp HHHHTCCSSTTTTTCCB
T ss_pred HHHcCCCCHHHHhchHh
Confidence 99999999999999864
No 9
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2e-46 Score=421.45 Aligned_cols=321 Identities=37% Similarity=0.669 Sum_probs=272.7
Q ss_pred CCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecC-CCCCCCcccccc
Q 014581 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRA-GANGSAKGQIIG 121 (422)
Q Consensus 43 ~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~-~~~~~a~~~~~G 121 (422)
++.+|+++++|++|+|||++|||+.+.+.+.++++.++|+|++++||++.++.+.+|+.||+++... +..-+ ...-+
T Consensus 529 ~~v~ls~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~--~~~~~ 606 (1025)
T 1gte_A 529 DLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYG--PGQSS 606 (1025)
T ss_dssp GGCCCCEEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCS--SCCSC
T ss_pred ccccceeeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccC--Cchhh
Confidence 5679999999999999999999988788998888888999999999999877566999999988432 21000 00112
Q ss_pred cccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccccc
Q 014581 122 WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQ 201 (422)
Q Consensus 122 l~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~ 201 (422)
+.|.+.++..+++.|+++++++++..|+.|+++|++.+.++++|.+++++++++|+|+||||++||+....+++|+++++
T Consensus 607 ~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~ 686 (1025)
T 1gte_A 607 FLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQ 686 (1025)
T ss_dssp EEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGG
T ss_pred eeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCccccccc
Confidence 55666677777999999999888877789999999767889999999999999999999999999998666788999999
Q ss_pred ChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccC-CCCCCCCCCCCccCCCC
Q 014581 202 DCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYS 280 (422)
Q Consensus 202 ~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~-~~p~~~~~~~~~~gG~s 280 (422)
+++.+.++++++++.+++||+||+++++.++.++++.+.++|+|+|+++||+.+.+.+|++. ..|.....+....+|++
T Consensus 687 ~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~s 766 (1025)
T 1gte_A 687 DPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVS 766 (1025)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEE
T ss_pred CHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999987766677653 22221111223468899
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHH
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~ 360 (422)
|++++|.+++.|+++++.++ ++|||++|||.|++|+.++|++||++||+||++++++|.+++++.++|+.+|+.
T Consensus 767 g~~~~~~~~~~v~~v~~~~~------~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~ 840 (1025)
T 1gte_A 767 GTAIRPIALRAVTTIARALP------GFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYL 840 (1025)
T ss_dssp SGGGHHHHHHHHHHHHHHST------TCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHcC------CCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHHH
Confidence 99999999999999998873 799999999999999999999999999999999998899999999999999999
Q ss_pred cCCCCHHHhhc
Q 014581 361 HNFSSIEDFRG 371 (422)
Q Consensus 361 ~G~~si~d~~G 371 (422)
+||.+++|++|
T Consensus 841 ~G~~~i~~l~g 851 (1025)
T 1gte_A 841 KSIEELQGWDG 851 (1025)
T ss_dssp TTCGGGTTSBT
T ss_pred cCCCCHHHHhC
Confidence 99999999998
No 10
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=100.00 E-value=5.3e-45 Score=358.39 Aligned_cols=305 Identities=29% Similarity=0.455 Sum_probs=254.6
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccc
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG 121 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~G 121 (422)
.+++||+++|+|++|+|||++|||+++.+.+..+.+...|+|++++||++.++ +.+++.||+++...+. .+++|
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~~~~~~~~~~~g~G~~~~~si~~~p-~~g~~~p~l~~~~~g~-----~~~~g 75 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHP-RFGNPTPRVAETASGM-----LNAIG 75 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTSTTGGGTSCGGGSSCEEEEEECSSC-BCCCCSCCEEEETTEE-----EECCC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCCHHHHHHHHhcCCCEEEeCeeccCc-cCCCCCCeEEECCccc-----ccccC
Confidence 46789999999999999999999988655445555556899999999999987 6789999998765433 67778
Q ss_pred cccccccCCChHHHHHHH-HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCEEEEccCCCCCCCcccccccc
Q 014581 122 WENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEE-TGIDAIEVNFSCPHGMPERKMGAAV 199 (422)
Q Consensus 122 l~n~~~~s~~~~e~~l~~-i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~-aGaD~iElN~scP~~~~~~~~G~~l 199 (422)
+.|.+ .+.+++. ++++++..++.|+++|+. +.++++|.++++++++ +|+|+||||++||+.. .+ |..+
T Consensus 76 ~~~~~------~~~~~~~~~~~~~~~~~~~p~~v~l~-~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~-~g--~~~~ 145 (311)
T 1ep3_A 76 LQNPG------LEVIMTEKLPWLNENFPELPIIANVA-GSEEADYVAVCAKIGDAANVKAIELNISCPNVK-HG--GQAF 145 (311)
T ss_dssp CCBCC------HHHHHHTHHHHHHHHCTTSCEEEEEC-CSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGG-GT--TEEG
T ss_pred CCCcC------HHHHHHHHHHHHHhcCCCCcEEEEEc-CCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCC-Cc--hhhh
Confidence 77766 6888664 556665345889999997 5679999999999988 8999999999999952 11 4556
Q ss_pred ccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 200 GQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 200 ~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
+.+++.+.++++++++.+++||++|+++++++..++++.+.++|+|+|+++|+..+ ..++.++.++... ...+|+
T Consensus 146 g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g-~~i~~~~~~~~~~----~~~~g~ 220 (311)
T 1ep3_A 146 GTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMG-VRFDLKTRQPILA----NITGGL 220 (311)
T ss_dssp GGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEE-CCBCTTTCSBSST----TSCEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcc-cccCcccCCcccc----CCCCcc
Confidence 67899999999999998899999999999888899999999999999999997654 2344443333221 124678
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHH
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~ 359 (422)
+|+++.|..++.++++++.+ ++|||++|||.+++|+.+++++|||+||+||+++.+ |++++++.++++.||+
T Consensus 221 ~g~~~~~~~~~~i~~i~~~~-------~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~-p~~~~~i~~~l~~~~~ 292 (311)
T 1ep3_A 221 SGPAIKPVALKLIHQVAQDV-------DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFAD-PFVCPKIIDKLPELMD 292 (311)
T ss_dssp ESGGGHHHHHHHHHHHHTTC-------SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHC-TTHHHHHHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhc-------CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcC-cHHHHHHHHHHHHHHH
Confidence 88887787888888888765 799999999999999999999999999999999985 9999999999999999
Q ss_pred HcCCCCHHHhhcCCcc
Q 014581 360 MHNFSSIEDFRGASIE 375 (422)
Q Consensus 360 ~~G~~si~d~~G~~~~ 375 (422)
++||+|++|++|..++
T Consensus 293 ~~g~~~~~~~~g~~~~ 308 (311)
T 1ep3_A 293 QYRIESLESLIQEVKE 308 (311)
T ss_dssp HTTCSCHHHHHHHHHH
T ss_pred HcCCCCHHHHhChhcc
Confidence 9999999999997654
No 11
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=100.00 E-value=2.1e-40 Score=329.64 Aligned_cols=277 Identities=21% Similarity=0.317 Sum_probs=230.7
Q ss_pred CCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccc
Q 014581 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWE 123 (422)
Q Consensus 44 ~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~ 123 (422)
.+||+++++|++|+|||++|||++ .+++..+.+.+.|+|+++++|++.++ +.+|+.||++++.++. +..|.+|++
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag~~-~~~~~~~~~a~~G~g~i~~~~~~~~~-~~g~~~pr~~~~~~d~---~~in~~g~~ 116 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAGLD-KDGECIDALGAMGFGSIEIGTVTPRP-QPGNDKPRLFRLVDAE---GLINRMGFN 116 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTTSS-TTCCCHHHHHHTTCSEEEEEEECSSC-BCCSCSCCEEEETTTT---EEEECCCCC
T ss_pred CCCCCeEECCEEcCCCcEeCcccC-CcHHHHHHHHHcCccEEEeCCCCCCC-CCCCCCcceeeccccc---eeeecCCCC
Confidence 379999999999999999999975 66677888999999999999999986 5788999999887543 457888988
Q ss_pred cccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCC-------HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccc
Q 014581 124 NIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN-------KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMG 196 (422)
Q Consensus 124 n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~-------~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G 196 (422)
|.+ .+.+++.+++.+ .+.|+++|++. .. .++|.+.++++.+ |+|+||+|++||++..
T Consensus 117 ~~g------~~~~~~~~~~~~---~~~~~~v~i~~-~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g----- 180 (336)
T 1f76_A 117 NLG------VDNLVENVKKAH---YDGVLGINIGK-NKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPG----- 180 (336)
T ss_dssp BCC------HHHHHHHHHHCC---CCSEEEEEECC-CTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTT-----
T ss_pred CcC------HHHHHHHHHhcc---cCCcEEEEecC-CCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCC-----
Confidence 887 678877776542 25799999973 33 7889999998876 8999999999999632
Q ss_pred cccccChhHHHHHHHHHhhcc---------CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCC
Q 014581 197 AAVGQDCRLLEEVCGWINAKA---------TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR 265 (422)
Q Consensus 197 ~~l~~~~~~v~~iv~~vr~~~---------~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~ 265 (422)
....++++.+.+++++||+.+ ++||+||++++++ ++.++++.+.++|+|+|+++|++.+.. +.. .
T Consensus 181 ~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~--~~~--~ 256 (336)
T 1f76_A 181 LRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRS--LVQ--G 256 (336)
T ss_dssp GGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCT--TST--T
T ss_pred cccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccc--ccc--c
Confidence 233467999999999999987 8999999999876 578889999999999999999875431 111 1
Q ss_pred CCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhH
Q 014581 266 PEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345 (422)
Q Consensus 266 p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~ 345 (422)
+.. ....||++|++++|.+++.++++++.+++ ++|||++|||.|++|+.+++++|||+||+||++++++|+
T Consensus 257 ~~~----~~~~gg~~g~~~~~~~~~~i~~i~~~~~~-----~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~ 327 (336)
T 1f76_A 257 MKN----CDQTGGLSGRPLQLKSTEIIRRLSLELNG-----RLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPP 327 (336)
T ss_dssp STT----TTCSSEEEEGGGHHHHHHHHHHHHHHHTT-----SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHH
T ss_pred ccc----cccCCCcCCchhHHHHHHHHHHHHHHhCC-----CCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcH
Confidence 111 12457899998888999999999998753 799999999999999999999999999999999997799
Q ss_pred HHHHHHHHH
Q 014581 346 LVKRLCEEL 354 (422)
Q Consensus 346 ~i~~i~~~l 354 (422)
+++++.++|
T Consensus 328 ~~~~i~~~l 336 (336)
T 1f76_A 328 LIKEIVTHI 336 (336)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998764
No 12
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.96 E-value=2.6e-27 Score=236.51 Aligned_cols=274 Identities=17% Similarity=0.185 Sum_probs=184.2
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCCC-------CHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPGT-------NYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGS 114 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~~-------~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~ 114 (422)
.+++|++++++|.+|++||++|++.... +....+.+.++|+++ ++++.+..
T Consensus 40 ~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~-~~~~~~~~--------------------- 97 (349)
T 1p0k_A 40 LEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPL-AVGSQMSA--------------------- 97 (349)
T ss_dssp GGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCE-ECCCCTTT---------------------
T ss_pred cccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcE-Eeccchhc---------------------
Confidence 4678999999999999999999953322 224455566678885 44443210
Q ss_pred CcccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccc
Q 014581 115 AKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERK 194 (422)
Q Consensus 115 a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~ 194 (422)
+.+++ ...|.+.++ +..++.|+++|+..+.+++.+. +.++.+|+|+||+|++||+.....
T Consensus 98 -------l~~~~------~~~~~~~~~---~~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~~~~~- 157 (349)
T 1p0k_A 98 -------LKDPS------ERLSYEIVR---KENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQEIVMP- 157 (349)
T ss_dssp -------TTCHH------HHHHHHHHH---HHCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTTC----
T ss_pred -------ccCcc------cccceehhh---hhCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhhhcCC-
Confidence 11111 234444333 2345889999997556776544 445567999999999999852111
Q ss_pred cccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCC
Q 014581 195 MGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274 (422)
Q Consensus 195 ~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~ 274 (422)
.| ..+.+.+.++++++++.+++||++|+.++..+ .+.++.+.++|+|+|+++|+.+. ...+++..++..... ..
T Consensus 158 ~~---~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~-~~~a~~a~~~Gad~I~v~~~ggt-~~~~~e~~r~~~~~~-~~ 231 (349)
T 1p0k_A 158 EG---DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS-KASAGKLYEAGAAAVDIGGYGGT-NFSKIENLRRQRQIS-FF 231 (349)
T ss_dssp --------CTTHHHHHHHHHHHCSSCEEEEEESSCCC-HHHHHHHHHHTCSEEEEEC----------------CCGG-GG
T ss_pred CC---CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC-HHHHHHHHHcCCCEEEEcCCCCc-chhhHHHhhcccchh-hh
Confidence 11 01122377889999988899999998533223 67899999999999999987432 233444322210000 00
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh----hh----HH
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH----GY----GL 346 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~----Gp----~~ 346 (422)
..+|. .....++++++.+. ++|||++|||.+++|+.+++++|||+|++||++++. |+ .+
T Consensus 232 ~~~g~-------~~~~~l~~v~~~~~------~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~ 298 (349)
T 1p0k_A 232 NSWGI-------STAASLAEIRSEFP------ASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEE 298 (349)
T ss_dssp TTCSC-------CHHHHHHHHHHHCT------TSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHH
T ss_pred hccCc-------cHHHHHHHHHHhcC------CCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHH
Confidence 11222 23456677777652 799999999999999999999999999999999986 66 67
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHhhcCCccc
Q 014581 347 VKRLCEELKDFMKMHNFSSIEDFRGASIEY 376 (422)
Q Consensus 347 i~~i~~~l~~~m~~~G~~si~d~~G~~~~~ 376 (422)
++.+.++|+.+|...|+.+++|+++..+..
T Consensus 299 ~~~~~~~l~~~m~~~G~~~i~el~~~~~~~ 328 (349)
T 1p0k_A 299 IQLILEELKLIMTVLGARTIADLQKAPLVI 328 (349)
T ss_dssp HHHHHHHHHHHHHHHTCCBHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHhhCCeec
Confidence 899999999999999999999999876654
No 13
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.94 E-value=4.3e-26 Score=227.58 Aligned_cols=229 Identities=13% Similarity=0.134 Sum_probs=172.0
Q ss_pred ecCCCceecCCCCCCCHHHHHHHH-HcC-CcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCCh
Q 014581 55 QMPNPFVIGSGPPGTNYTVMKRAF-DEG-WGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRP 132 (422)
Q Consensus 55 ~l~nPi~~AAg~~~~~~~~~~~~~-~~G-~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~ 132 (422)
.++|||++|++..-++.. ++.+. +.| +|.++++.++.++. + .+ +
T Consensus 1 ~l~nriv~APM~g~td~~-~r~~~r~~Gg~gli~te~~~~~~~--------~------------------~~-----~-- 46 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRH-FRFLVRQVSLGVRLYTEMTVDQAV--------L------------------RG-----N-- 46 (350)
T ss_dssp -CCCSEEECCCTTTSSHH-HHHHHHHHCSSSBEECCCEEHHHH--------H------------------HS-----C--
T ss_pred CCCCCEEECCCCCCCHHH-HHHHHHHcCCCCEEEeCCEEechh--------h------------------cC-----C--
Confidence 379999999877544554 44444 345 59999887765320 0 00 0
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCc-cccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE-RKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~-~~~G~~l~~~~~~v~~iv~ 211 (422)
.. .+.++.. .+.|+++||. +.+++++.+++++++++|+|+||||++||..... ..||++++++++.+.++++
T Consensus 47 ~~----~~~~~~~--~~~p~~vQL~-g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~ 119 (350)
T 3b0p_A 47 RE----RLLAFRP--EEHPIALQLA-GSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILK 119 (350)
T ss_dssp HH----HHHCCCG--GGCSEEEEEE-CSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHH
T ss_pred HH----HHhccCC--CCCeEEEEeC-CCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHH
Confidence 01 1111211 1679999997 6789999999999999999999999999986422 3589999999999999999
Q ss_pred HHhhccCccEEEEECCCCCC------hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC---
Q 014581 212 WINAKATVPVWAKMTPNITD------ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK--- 282 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~~------~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~--- 282 (422)
++++.+++||++|++..+.+ ..++++.+.++|+|+|+++++... .|++|+
T Consensus 120 av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~---------------------~g~~g~~~~ 178 (350)
T 3b0p_A 120 AMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL---------------------LALSTKANR 178 (350)
T ss_dssp HHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC------------------------------
T ss_pred HHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchh---------------------cccCccccc
Confidence 99998899999999876543 578899999999999999986531 122221
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
...+..++.++++++.++ ++|||++|||.|++|+.+++. |||+||+||+++.+ |++++++.+.
T Consensus 179 ~~~~~~~~~i~~ik~~~~------~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~-P~l~~~i~~~ 241 (350)
T 3b0p_A 179 EIPPLRHDWVHRLKGDFP------QLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYED-PFVLEEADRR 241 (350)
T ss_dssp -CCCCCHHHHHHHHHHCT------TSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHC-GGGGTTHHHH
T ss_pred CCCcccHHHHHHHHHhCC------CCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhC-cHHHHHHHHH
Confidence 122445778888888763 799999999999999999998 99999999999987 8887776543
No 14
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.94 E-value=3e-25 Score=220.57 Aligned_cols=253 Identities=14% Similarity=0.194 Sum_probs=189.1
Q ss_pred ceEeCCeecCCCceecCCCCCC--------CH---HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT--------NY---TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK 116 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~--------~~---~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~ 116 (422)
+.++++++|+|+|++|++.... +. +.+++.++.|+|.++++.+...+. +...
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~--g~~~--------------- 70 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQ--GRIT--------------- 70 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG--GCSS---------------
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeecccc--ccCC---------------
Confidence 4688999999999999865322 22 224444556999999998876431 1100
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCC----------------------CC------------H
Q 014581 117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE----------------------YN------------K 162 (422)
Q Consensus 117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~----------------------~~------------~ 162 (422)
. ..+++|++..++.|.+....+++. +.++++||... .. .
T Consensus 71 ~-----~~~~i~~d~~~~~~~~~~~~vh~~--g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i 143 (338)
T 1z41_A 71 D-----QDLGIWSDEHIEGFAKLTEQVKEQ--GSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETV 143 (338)
T ss_dssp T-----TSCBCSSTHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHH
T ss_pred C-----CCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHH
Confidence 1 123455554566665555555553 67999999621 01 2
Q ss_pred HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhccCccEEEEECCC----
Q 014581 163 AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN---- 228 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~---- 228 (422)
++|.+.|+++.++|+|+||||.+| |++... ..||++++++++.+.+++++||++++.||.||++++
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 678889999999999999999886 876321 258899999999999999999999999999999984
Q ss_pred --C--CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 229 --I--TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 229 --~--~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
+ .+..++++.+.++|+|+|.++++... +...+ .++ ...++.++++++.+
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~------~~~~~-------------~~~---~~~~~~~~~ir~~~----- 276 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALV------HADIN-------------VFP---GYQVSFAEKIREQA----- 276 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSS------CCCCC-------------CCT---TTTHHHHHHHHHHH-----
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccc------cCCCC-------------CCc---cchHHHHHHHHHHC-----
Confidence 1 13678999999999999999986421 00000 011 12356777888877
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.+++
T Consensus 277 --~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~n-Pdl~~ki~~~~ 324 (338)
T 1z41_A 277 --DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRD-PFFARTAAKQL 324 (338)
T ss_dssp --CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHC-TTHHHHHHHHT
T ss_pred --CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhC-chHHHHHHcCC
Confidence 79999999999999999999999 9999999999999 99999998875
No 15
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.94 E-value=1.2e-24 Score=216.27 Aligned_cols=253 Identities=15% Similarity=0.167 Sum_probs=189.2
Q ss_pred ceEeCCeecCCCceecCCCCCC--------CH---HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT--------NY---TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK 116 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~--------~~---~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~ 116 (422)
+.++.+++|+|.|+.|++.... +. +...+.++.|+|.|+++.+...+. +...|
T Consensus 8 p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~--g~~~~-------------- 71 (340)
T 3gr7_A 8 PYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQ--GRISE-------------- 71 (340)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG--GCSST--------------
T ss_pred CEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEeccc--ccCCC--------------
Confidence 5778999999999999754311 22 334444557999999998776541 21111
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C--------------------------CC-------H
Q 014581 117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E--------------------------YN-------K 162 (422)
Q Consensus 117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~--------------------------~~-------~ 162 (422)
..++++++.-++.|.+....+++. +..+++||.. | .+ .
T Consensus 72 ------~~~~i~~d~~i~~~~~~~~~vh~~--G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii 143 (340)
T 3gr7_A 72 ------RDLGIWSDDHIAGLRELVGLVKEH--GAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETV 143 (340)
T ss_dssp ------TSEECSSTTHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHH
T ss_pred ------CCcccCCHHHHHHHHHHHHHHHhC--CCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHH
Confidence 123445555577777766666653 6778888841 0 01 3
Q ss_pred HHHHHHHHHHHHhCCCEEEEccC---------CCCCCCc-cccccccccChhHHHHHHHHHhhccCccEEEEECCC----
Q 014581 163 AAWEELIDRVEETGIDAIEVNFS---------CPHGMPE-RKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN---- 228 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN~s---------cP~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~---- 228 (422)
++|.++|++++++|+|+||||.+ ||++... ..||++++++++.+.+++++||+.++.||.||++++
T Consensus 144 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 144 QAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 57888899999999999999988 4876322 258999999999999999999999999999999985
Q ss_pred ----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 229 ----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 229 ----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
.++..++++.+.++|+|+|.++++... + .+.+ .++ ...++.++++++.+
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~----~----~~~~-----------~~~---~~~~~~~~~ik~~~----- 276 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIV----P----ARMN-----------VYP---GYQVPFAELIRREA----- 276 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSS----C----CCCC-----------CCT---TTTHHHHHHHHHHT-----
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCcc----C----CCCC-----------CCc---cccHHHHHHHHHHc-----
Confidence 235789999999999999999974321 0 0000 011 12356777888876
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
++|||++|||.+++++.++|..| ||+|++||+++.+ |++++++.+++
T Consensus 277 --~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lan-Pdl~~ki~~~l 324 (340)
T 3gr7_A 277 --DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRN-PYWPYAAAREL 324 (340)
T ss_dssp --TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHC-TTHHHHHHHHT
T ss_pred --CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhC-chHHHHHHHHC
Confidence 79999999999999999999999 9999999999999 99999998775
No 16
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.93 E-value=1e-25 Score=222.17 Aligned_cols=226 Identities=15% Similarity=0.133 Sum_probs=168.2
Q ss_pred eecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChH
Q 014581 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPL 133 (422)
Q Consensus 54 l~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~ 133 (422)
++++|||++|++....+..+...+.+.|+|.+++..++.++. +..+ .
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~-------------------------~~~~--------~ 47 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGF-------------------------LMNS--------Q 47 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHH-------------------------HTTC--------H
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEccc-------------------------ccCC--------H
Confidence 468999999987754555544444558999999887664320 0011 1
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC-ccccccccccChhHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP-ERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~-~~~~G~~l~~~~~~v~~iv~~ 212 (422)
+. ++.+.. ..+.|+++||. +.++++|.++|++++++ +|+||||++||.... ...||++++++++.+.+++++
T Consensus 48 ~~----~~~l~~-~~~~~~~~QL~-g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~ 120 (318)
T 1vhn_A 48 KT----EELLPQ-PHERNVAVQIF-GSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRE 120 (318)
T ss_dssp HH----HHHSCC-TTCTTEEEEEE-CSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHH
T ss_pred hH----HHhhhC-cCCCeEEEEeC-CCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHH
Confidence 11 222211 23789999997 77899999999999999 999999999998532 236899999999999999999
Q ss_pred HhhccCccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 213 INAKATVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 213 vr~~~~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
+++.+++||+||+++.++ +..++++.+.++|+|+|+++++... ++++|++. ++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~---------------------~~~~~~~~----~~ 175 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVV---------------------QSFTGRAE----WK 175 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTT---------------------TTTSSCCC----GG
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCcc---------------------ccCCCCcC----HH
Confidence 999999999999998654 3558999999999999999876421 12333221 12
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHH-hCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL-LGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~-aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
.++++++ ++|||++|||.|++|+.+++. .|||+||+||+++.+ |+++.++.+.+
T Consensus 176 ~i~~i~~---------~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~-P~l~~~~~~~~ 230 (318)
T 1vhn_A 176 ALSVLEK---------RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGR-PWIFKQIKDFL 230 (318)
T ss_dssp GGGGSCC---------SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTC-TTHHHHHHHHH
T ss_pred HHHHHHc---------CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhC-cchHHHHHHHH
Confidence 2222222 599999999999999999998 799999999999987 88888876644
No 17
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.93 E-value=1.3e-24 Score=216.80 Aligned_cols=270 Identities=17% Similarity=0.155 Sum_probs=169.1
Q ss_pred CCCCCCcceEeCCeecCCCceecCCCCCC--CH----HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCC
Q 014581 41 ASAEPDLSITVNGLQMPNPFVIGSGPPGT--NY----TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGS 114 (422)
Q Consensus 41 ~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~--~~----~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~ 114 (422)
+.+++|++|+|+|.+|+.||+++++..+. .. ...+.+.++|.+..+ ++...
T Consensus 70 ~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~v-Gs~~~---------------------- 126 (365)
T 3sr7_A 70 DLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVT-GSYST---------------------- 126 (365)
T ss_dssp CGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC----------------------------
T ss_pred CcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeec-ccccc----------------------
Confidence 46789999999999999999999865432 22 234445557888554 33221
Q ss_pred CcccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccc
Q 014581 115 AKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERK 194 (422)
Q Consensus 115 a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~ 194 (422)
.+.+++ . ..+. +++.+|+.++++||+.....+ +..+.++..|+|++++|+...+......
T Consensus 127 ------~le~~~------~----~~~~-v~r~~P~~~~ianig~~~~~e---~~~~~ve~~~adal~ihln~~qe~~~p~ 186 (365)
T 3sr7_A 127 ------ALKNPD------D----TSYQ-VKKSRPHLLLATNIGLDKPYQ---AGLQAVRDLQPLFLQVHINLMQELLMPE 186 (365)
T ss_dssp -----------------------------------CCEEEEEETTSCHH---HHHHHHHHHCCSCEEEEECHHHHHTSSS
T ss_pred ------cccCcc------c----cceE-ehhhCCCCcEEEEeCCCCCHH---HHHHHHHhcCCCEEEEeccccccccCCC
Confidence 011111 0 0011 112237899999997544444 3455566679999999986432100000
Q ss_pred cccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCC
Q 014581 195 MGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274 (422)
Q Consensus 195 ~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~ 274 (422)
| ..+.+.+.+.++++++.+++||+||... +....+.|+.+.++|+|+|+++|+.+. ...++|+.+..+. ..+
T Consensus 187 -G---d~~~~~~~~~I~~l~~~~~~PVivK~vg-~g~s~e~A~~l~~aGad~I~V~g~GGt-~~a~ie~~r~~~~-~~~- 258 (365)
T 3sr7_A 187 -G---EREFRSWKKHLSDYAKKLQLPFILKEVG-FGMDVKTIQTAIDLGVKTVDISGRGGT-SFAYIENRRGGNR-SYL- 258 (365)
T ss_dssp -S---CCCCHHHHHHHHHHHHHCCSCEEEEECS-SCCCHHHHHHHHHHTCCEEECCCBC---------------C-GGG-
T ss_pred -C---CCcHHHHHHHHHHHHHhhCCCEEEEECC-CCCCHHHHHHHHHcCCCEEEEeCCCCc-ccchhhccccccc-ccc-
Confidence 0 1234457788999999899999999753 234578899999999999999998432 2234555432210 000
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh----hhh----HH
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM----HGY----GL 346 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~----~Gp----~~ 346 (422)
..+|+ | +...+.+++. +.. ++|||++|||+++.|+.|+|++|||+|++||++++ .|+ .+
T Consensus 259 ~~~g~------p-t~~~L~~v~~-~~~-----~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~ 325 (365)
T 3sr7_A 259 NQWGQ------T-TAQVLLNAQP-LMD-----KVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAI 325 (365)
T ss_dssp TTCSC------B-HHHHHHHHGG-GTT-----TSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHH
T ss_pred ccccc------c-HHHHHHHHHH-hcC-----CCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHH
Confidence 01222 2 2334444432 321 79999999999999999999999999999999986 343 47
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHhhcCCc
Q 014581 347 VKRLCEELKDFMKMHNFSSIEDFRGASI 374 (422)
Q Consensus 347 i~~i~~~l~~~m~~~G~~si~d~~G~~~ 374 (422)
++.+.++|+.+|...|+++++|+++..+
T Consensus 326 l~~l~~eL~~~m~~~G~~si~eL~~~~~ 353 (365)
T 3sr7_A 326 VNGWKEDLRLIMCALNCQTIAELRNVDY 353 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSSTGGGGGCCE
T ss_pred HHHHHHHHHHHHHHhCCcCHHHhccCCE
Confidence 8999999999999999999999997644
No 18
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.93 E-value=6.3e-24 Score=213.02 Aligned_cols=254 Identities=17% Similarity=0.235 Sum_probs=188.8
Q ss_pred CCCCCcceEeCCeecCCCceecCCC----CCCCH--HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGP----PGTNY--TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~----~~~~~--~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
.+++|++|+++|.++++||++|+.- ...++ ...+.+.++|.++++. +...
T Consensus 65 ~~~~d~st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s-~~~s----------------------- 120 (368)
T 2nli_A 65 VEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSIS-AYSG----------------------- 120 (368)
T ss_dssp CSCCCCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEEC-TTCS-----------------------
T ss_pred CccCCcceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEee-chHh-----------------------
Confidence 6788999999999999999999533 11222 4445556688886652 2110
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-----
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM----- 190 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~----- 190 (422)
.. +++ +... .++.|+.+|+....+.+...+.+++++++|++++.||+.||...
T Consensus 121 ---------~~------le~----v~~~---~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d 178 (368)
T 2nli_A 121 ---------AT------FEE----ISEG---LNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRD 178 (368)
T ss_dssp ---------SC------HHH----HHHH---HTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--
T ss_pred ---------HH------HHH----HHHh---CCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHH
Confidence 00 232 2221 14679999996445677778899999999999999999998621
Q ss_pred -------C-----c------ccccccc---c--cChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEE
Q 014581 191 -------P-----E------RKMGAAV---G--QDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGV 247 (422)
Q Consensus 191 -------~-----~------~~~G~~l---~--~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi 247 (422)
+ . ...|..+ . .++....++++++|+.+++||++|.. ...+.++.+.++|+|+|
T Consensus 179 ~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v----~~~e~a~~a~~~Gad~I 254 (368)
T 2nli_A 179 VKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGI----QHPEDADMAIKRGASGI 254 (368)
T ss_dssp ------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEE----CSHHHHHHHHHTTCSEE
T ss_pred HhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcC----CCHHHHHHHHHcCCCEE
Confidence 0 0 0123332 2 26677788899999999999999964 23678999999999999
Q ss_pred EEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHH
Q 014581 248 SAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327 (422)
Q Consensus 248 ~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~ 327 (422)
+++|+.+. .. .+ | +.+++.+.++++.+++ ++|||++|||++++|+.++|+
T Consensus 255 ~vs~~ggr--~~----------------~~---g----~~~~~~l~~v~~~v~~-----~ipVia~GGI~~g~D~~kala 304 (368)
T 2nli_A 255 WVSNHGAR--QL----------------YE---A----PGSFDTLPAIAERVNK-----RVPIVFDSGVRRGEHVAKALA 304 (368)
T ss_dssp EECCGGGT--SC----------------SS---C----CCHHHHHHHHHHHHTT-----SSCEEECSSCCSHHHHHHHHH
T ss_pred EEcCCCcC--CC----------------CC---C----CChHHHHHHHHHHhCC-----CCeEEEECCCCCHHHHHHHHH
Confidence 99987431 00 11 1 3356788889888753 699999999999999999999
Q ss_pred hCCCEEEEhhHHHhh----hh----HHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 328 LGANTVQVCTGVMMH----GY----GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 328 aGAd~V~vgtall~~----Gp----~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
+|||+|++||++++. |. .+++.+.++|+.+|...|+.+++|+++..+.
T Consensus 305 lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 360 (368)
T 2nli_A 305 SGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLF 360 (368)
T ss_dssp TTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEE
T ss_pred cCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEe
Confidence 999999999999875 33 4688899999999999999999999987653
No 19
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.92 E-value=1.6e-24 Score=216.95 Aligned_cols=276 Identities=21% Similarity=0.245 Sum_probs=183.6
Q ss_pred CCCCCCCcceEeCCeecCCCceecCCCCCCCHH------HHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCC
Q 014581 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYT------VMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113 (422)
Q Consensus 40 ~~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~------~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~ 113 (422)
++.+++|++++|+|.+|++||+++++..+.... ..+.+.++|.+.++ ++...
T Consensus 42 ~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~v-Gs~~~--------------------- 99 (368)
T 3vkj_A 42 ISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGV-GSQRV--------------------- 99 (368)
T ss_dssp SBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEEC-CCCHH---------------------
T ss_pred cCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeee-ecchh---------------------
Confidence 347789999999999999999999976643222 23445567988654 33211
Q ss_pred CCcccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC----C-CCHHHHHHHHHHHHHhCCCEEEEccCCCC
Q 014581 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME----E-YNKAAWEELIDRVEETGIDAIEVNFSCPH 188 (422)
Q Consensus 114 ~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~----~-~~~~~~~~~a~~~~~aGaD~iElN~scP~ 188 (422)
++.+++. .+.+ +.+++..|+.|+++|++. + ++.+...++++++ ++|+++||+...+
T Consensus 100 -------~l~~~~~-----~~s~----~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~---~a~al~Ihln~~~ 160 (368)
T 3vkj_A 100 -------AIEKAEA-----RESF----AIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMI---EADAIAVHLNPAQ 160 (368)
T ss_dssp -------HHHCGGG-----SHHH----HHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHT---TCSEEEEECCHHH
T ss_pred -------ccCCHHH-----HhhH----HHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHh---cCCCeEEEecchh
Confidence 1122221 1222 123344688999999974 3 5566655555544 5677777753111
Q ss_pred C--CCccccccccccChh-HHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCC
Q 014581 189 G--MPERKMGAAVGQDCR-LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR 265 (422)
Q Consensus 189 ~--~~~~~~G~~l~~~~~-~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~ 265 (422)
. ++. | ..+.. .+.+.++++++.+++||+||...+.. ..+.|+.+.++|+|+|+++|+.+. ..+++|+.+
T Consensus 161 ~~~~p~---g---~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~-s~~~A~~l~~aGad~I~V~g~GGt-~~~~iE~~R 232 (368)
T 3vkj_A 161 EVFQPE---G---EPEYQIYALEKLRDISKELSVPIIVKESGNGI-SMETAKLLYSYGIKNFDTSGQGGT-NWIAIEMIR 232 (368)
T ss_dssp HHHSSS---C---CCBCBTHHHHHHHHHHTTCSSCEEEECSSSCC-CHHHHHHHHHTTCCEEECCCBTSB-CHHHHHHHH
T ss_pred hhhCCC---C---CchhhHHHHHHHHHHHHHcCCCEEEEeCCCCC-CHHHHHHHHhCCCCEEEEeCCCCC-cccchhhhh
Confidence 0 000 0 01112 36778899999999999999643222 367899999999999999998542 344555432
Q ss_pred CCCC--C--CCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 266 PEPC--V--EGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 266 p~~~--~--~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
.... . ..+....+++. | +...+.++++.++ ++|||++|||.++.|+.+++++|||+|++||.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~g~----p-t~~~l~~v~~~~~------~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 233 DIRRGNWKAESAKNFLDWGV----P-TAASIMEVRYSVP------DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp HHHTTCTHHHHHHHTTTCSC----B-HHHHHHHHHHHST------TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cccccccchhhccccccccc----c-HHHHHHHHHHHcC------CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 1100 0 00001122221 3 2345677877763 69999999999999999999999999999999986
Q ss_pred ---hhhH----HHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 342 ---HGYG----LVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 342 ---~Gp~----~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
.|+. +++.+.++|+.+|...|+.+++|+++..+-
T Consensus 302 ~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~ 342 (368)
T 3vkj_A 302 SAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIV 342 (368)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEE
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEE
Confidence 5664 788999999999999999999999976543
No 20
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.92 E-value=3.2e-23 Score=209.28 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=186.3
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCC----CCH--HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPG----TNY--TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~----~~~--~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
.+++|++|+++|.+++.||++|++-.+ .++ ...+.+.++|.++++. |...
T Consensus 79 ~~~~d~st~i~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s-~~~s----------------------- 134 (392)
T 2nzl_A 79 VAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLS-SWAT----------------------- 134 (392)
T ss_dssp CTTCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEEC-TTCS-----------------------
T ss_pred CcCCCcceEECCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeecc-chHH-----------------------
Confidence 577899999999999999999986221 122 3455556678876653 2110
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-----
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM----- 190 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~----- 190 (422)
.. +|+ +. +..++.|+.+|+....+.+...+++++++++|++++.+|+.||...
T Consensus 135 ---------~~------le~----v~---~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d 192 (392)
T 2nzl_A 135 ---------SS------IEE----VA---EAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDD 192 (392)
T ss_dssp ---------SC------HHH----HH---HHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHH
T ss_pred ---------HH------HHH----HH---HhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHh
Confidence 00 232 21 1224789999996445677778899999999999999999998630
Q ss_pred -------C-c---ccc---------------cc---cccc---ChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHH
Q 014581 191 -------P-E---RKM---------------GA---AVGQ---DCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238 (422)
Q Consensus 191 -------~-~---~~~---------------G~---~l~~---~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~ 238 (422)
+ . ++. |. .+.. +++...+.++++++.+++||++|... ..+.|+.
T Consensus 193 ~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~----~~e~A~~ 268 (392)
T 2nzl_A 193 VRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGIL----RGDDARE 268 (392)
T ss_dssp HHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEEC----CHHHHHH
T ss_pred HhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecC----CHHHHHH
Confidence 0 0 010 11 0111 66667788999999999999999752 2678999
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET 318 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s 318 (422)
+.++|+|+|+++|+.+. . ..+| +..++.+.++++.+.+ ++|||++|||.+
T Consensus 269 a~~aGad~I~vs~~ggr--~----------------~~~g-------~~~~~~l~~v~~av~~-----~ipVia~GGI~~ 318 (392)
T 2nzl_A 269 AVKHGLNGILVSNHGAR--Q----------------LDGV-------PATIDVLPEIVEAVEG-----KVEVFLDGGVRK 318 (392)
T ss_dssp HHHTTCCEEEECCGGGT--S----------------STTC-------CCHHHHHHHHHHHHTT-----SSEEEECSSCCS
T ss_pred HHHcCCCEEEeCCCCCC--c----------------CCCC-------cChHHHHHHHHHHcCC-----CCEEEEECCCCC
Confidence 99999999999987531 0 0112 3456788889888753 699999999999
Q ss_pred HHHHHHHHHhCCCEEEEhhHHHhh----h---h-HHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 319 GGDAAEFILLGANTVQVCTGVMMH----G---Y-GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 319 ~~da~~~l~aGAd~V~vgtall~~----G---p-~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
++|+.++|++|||+|++||++++. | . .+++.+.++|+.+|...|+.+++|+++..+.
T Consensus 319 g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~ 383 (392)
T 2nzl_A 319 GTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVR 383 (392)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC
T ss_pred HHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhh
Confidence 999999999999999999999874 1 1 3688899999999999999999999887653
No 21
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.92 E-value=4.4e-23 Score=205.78 Aligned_cols=254 Identities=13% Similarity=0.178 Sum_probs=186.1
Q ss_pred ceEeCCeecCCCceecCCCCC-------CCH---HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 48 SITVNGLQMPNPFVIGSGPPG-------TNY---TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~-------~~~---~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+.++++++|+|.|+.|++... .+. +.+.+.++.|+|.|+++.+...+. +...|
T Consensus 7 p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~--g~~~~--------------- 69 (349)
T 3hgj_A 7 PLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPL--GRISP--------------- 69 (349)
T ss_dssp CEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG--GCSST---------------
T ss_pred CeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeeccc--ccCCC---------------
Confidence 467899999999999986531 122 233444456999999998776541 11111
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-------------------------------C------C
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-------------------------------E------Y 160 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-------------------------------~------~ 160 (422)
..++++++.-++.|.+....+++. +..+++||.- + .
T Consensus 70 -----~~~~i~~d~~i~~~~~~~~~vh~~--G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~m 142 (349)
T 3hgj_A 70 -----YDLGIWSEDHLPGLKELARRIREA--GAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPL 142 (349)
T ss_dssp -----TSCBCSSGGGHHHHHHHHHHHHHT--TCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEEC
T ss_pred -----CcCccCcHHHHHHHHHHHHHHHhC--CCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccC
Confidence 122444554577777666666653 5567777631 0 0
Q ss_pred C-------HHHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhcc--CccE
Q 014581 161 N-------KAAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKA--TVPV 221 (422)
Q Consensus 161 ~-------~~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv 221 (422)
+ .++|.+.|+++.++|+|+||||.+| |++... ..||++++++.+.+.+++++||+.+ ++||
T Consensus 143 t~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV 222 (349)
T 3hgj_A 143 DEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPL 222 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 1 2567888999999999999999999 886322 2589999999999999999999998 7999
Q ss_pred EEEECCCC--------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 222 WAKMTPNI--------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 222 ~vKl~~~~--------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
.||++++. ++..++++.+.++|+|+|.++++... .....+ .++ ...++.++
T Consensus 223 ~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~-----~~~~~~-------------~~~---~~~~~~~~ 281 (349)
T 3hgj_A 223 FVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVV-----LRVRIP-------------LAP---GFQVPFAD 281 (349)
T ss_dssp EEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSC-----SSSCCC-------------CCT---TTTHHHHH
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcC-----cccccC-------------CCc---cccHHHHH
Confidence 99999841 24678899999999999999963211 000000 011 12356677
Q ss_pred HHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 294 ~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
++++.+ ++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.+++
T Consensus 282 ~ir~~~-------~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lan-Pdl~~k~~~~l 335 (349)
T 3hgj_A 282 AVRKRV-------GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRD-PYFPLRAAKAL 335 (349)
T ss_dssp HHHHHH-------CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHC-TTHHHHHHHHT
T ss_pred HHHHHc-------CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhC-chHHHHHHHHC
Confidence 888876 79999999999999999999999 9999999999998 99999998876
No 22
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.91 E-value=8.8e-23 Score=205.11 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=185.8
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCC----CCH--HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPG----TNY--TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~----~~~--~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
.+++|++|+++|.++++||++|++-.+ .++ ...+.+.++|.++++. +...
T Consensus 56 ~~~~d~~t~i~G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s-~~~~----------------------- 111 (370)
T 1gox_A 56 VTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWAT----------------------- 111 (370)
T ss_dssp CSCCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEEC-TTCS-----------------------
T ss_pred CCCCCCceEECCcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeecc-CCCC-----------------------
Confidence 577899999999999999999986321 122 2455566688886652 2110
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-----
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM----- 190 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~----- 190 (422)
.. +++ +++..+ .|..+|+....+.+...+++++++++|+++|++++.||...
T Consensus 112 ---------~~------iee-------v~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d 168 (370)
T 1gox_A 112 ---------SS------VEE-------VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 168 (370)
T ss_dssp ---------SC------HHH-------HHTTCC-CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHH
T ss_pred ---------CC------HHH-------HHhhcC-CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHH
Confidence 00 222 222223 68889985455777778889999999999999999998641
Q ss_pred -------C-cc---------------cccccc------ccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHH
Q 014581 191 -------P-ER---------------KMGAAV------GQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALR 241 (422)
Q Consensus 191 -------~-~~---------------~~G~~l------~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~ 241 (422)
+ .. ..|..+ ..++....+.++++++.+++||++|...+ .+.++.+.+
T Consensus 169 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~----~e~a~~a~~ 244 (370)
T 1gox_A 169 IKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVIT----AEDARLAVQ 244 (370)
T ss_dssp HHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCS----HHHHHHHHH
T ss_pred HHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCC----HHHHHHHHH
Confidence 0 00 011111 22445455778899998899999998743 578999999
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHH
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~d 321 (422)
+|+|+|+++|+... .. .++ +..++.+.++++.+++ ++|||++|||.+++|
T Consensus 245 ~Gad~I~vs~~ggr--~~----------------~~~-------~~~~~~l~~v~~~~~~-----~ipvia~GGI~~~~D 294 (370)
T 1gox_A 245 HGAAGIIVSNHGAR--QL----------------DYV-------PATIMALEEVVKAAQG-----RIPVFLDGGVRRGTD 294 (370)
T ss_dssp TTCSEEEECCGGGT--SS----------------TTC-------CCHHHHHHHHHHHTTT-----SSCEEEESSCCSHHH
T ss_pred cCCCEEEECCCCCc--cC----------------CCc-------ccHHHHHHHHHHHhCC-----CCEEEEECCCCCHHH
Confidence 99999999886421 00 111 2356788888888753 799999999999999
Q ss_pred HHHHHHhCCCEEEEhhHHHhh----hh----HHHHHHHHHHHHHHHHcCCCCHHHhhcCCcc
Q 014581 322 AAEFILLGANTVQVCTGVMMH----GY----GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375 (422)
Q Consensus 322 a~~~l~aGAd~V~vgtall~~----Gp----~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~ 375 (422)
+.+++++|||+|++||++++. |+ .+++.+.++|+.+|..+|+.+++|+++..+.
T Consensus 295 ~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~ 356 (370)
T 1gox_A 295 VFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIA 356 (370)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEE
T ss_pred HHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhccee
Confidence 999999999999999999874 44 5788999999999999999999999987653
No 23
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.91 E-value=1.4e-22 Score=211.12 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=186.1
Q ss_pred CCCCCcceEeCCeecCCCceecCCCC---C----CCHHHHHHHHH--cCCcEEEecccccCcccCCCCCCeeEeecCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPP---G----TNYTVMKRAFD--EGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~---~----~~~~~~~~~~~--~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~ 112 (422)
...+|++|+++|.++++||++|+... + ......+.+.+ +|.++++ .+...
T Consensus 174 v~~~d~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~-s~~a~-------------------- 232 (511)
T 1kbi_A 174 VRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMI-STLAS-------------------- 232 (511)
T ss_dssp CSSCBCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEE-CTTCS--------------------
T ss_pred cccccCccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEe-CCccc--------------------
Confidence 57789999999999999999997543 1 12334444555 6776554 11100
Q ss_pred CCCcccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC-
Q 014581 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP- 191 (422)
Q Consensus 113 ~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~- 191 (422)
. +.+++ ..... .++.|...|+....+.+...+++++++++|+++|+|++.||+...
T Consensus 233 ----------~--------s~e~v----~~~~~-~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R 289 (511)
T 1kbi_A 233 ----------C--------SPEEI----IEAAP-SDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQR 289 (511)
T ss_dssp ----------S--------CHHHH----HHTCC-CSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCC
T ss_pred ----------C--------CHHHH----HhhcC-CCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcccc
Confidence 0 02221 11110 125789999964567788888999999999999999999997211
Q ss_pred c-----------------------cccc-cc-cc--cChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCC
Q 014581 192 E-----------------------RKMG-AA-VG--QDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244 (422)
Q Consensus 192 ~-----------------------~~~G-~~-l~--~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGa 244 (422)
. +..| .. +. .++....++++++|+.+++||++|...+ .+.|+.+.++|+
T Consensus 290 ~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~----~e~A~~a~~aGa 365 (511)
T 1kbi_A 290 EKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR----TEDVIKAAEIGV 365 (511)
T ss_dssp HHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECS----HHHHHHHHHTTC
T ss_pred HHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCC----HHHHHHHHHcCC
Confidence 0 0001 01 11 3566677889999999999999997643 678999999999
Q ss_pred CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHH
Q 014581 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324 (422)
Q Consensus 245 dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~ 324 (422)
|+|+++|+.+. .+| + + +..++.+.++++.+.+..-..++|||++|||++++|+.+
T Consensus 366 d~I~vs~hgG~--~~d----------------~---~----~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~k 420 (511)
T 1kbi_A 366 SGVVLSNHGGR--QLD----------------F---S----RAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLK 420 (511)
T ss_dssp SEEEECCTTTT--SST----------------T---C----CCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHH
T ss_pred CEEEEcCCCCc--cCC----------------C---C----CchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHH
Confidence 99999986432 111 1 1 224677888888773210002799999999999999999
Q ss_pred HHHhCCCEEEEhhHHHhh-------hh-HHHHHHHHHHHHHHHHcCCCCHHHhhcCCc
Q 014581 325 FILLGANTVQVCTGVMMH-------GY-GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374 (422)
Q Consensus 325 ~l~aGAd~V~vgtall~~-------Gp-~~i~~i~~~l~~~m~~~G~~si~d~~G~~~ 374 (422)
+|++|||+|+|||++++. |. .+++.+.++|+.+|...|+.+++|+++..+
T Consensus 421 aLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l 478 (511)
T 1kbi_A 421 ALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLL 478 (511)
T ss_dssp HHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGE
T ss_pred HHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHh
Confidence 999999999999999873 11 468889999999999999999999988755
No 24
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.91 E-value=7.2e-23 Score=205.26 Aligned_cols=245 Identities=16% Similarity=0.143 Sum_probs=180.3
Q ss_pred ceEeCCeecCCCceecCCCCCC--------CHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT--------NYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~--------~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
+.++.+++|+|+|++|++.... +...++.+.+ +|+|.|+++.+...+. +... .
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~--g~~~---------------~- 69 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPT--AKGY---------------A- 69 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGG--GCCS---------------T-
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeeccc--ccCC---------------C-
Confidence 3678999999999999865432 2344444433 7899999998876431 1111 1
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-----------C----------------------------
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-----------E---------------------------- 159 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-----------~---------------------------- 159 (422)
..++++++.-++.|.+....+++. +.++++||.. +
T Consensus 70 ----~~~gi~~d~~i~~~~~l~~~vh~~--g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~ 143 (365)
T 2gou_A 70 ----WTPGIYTPEQIAGWRIVTEAVHAK--GCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFV 143 (365)
T ss_dssp ----TCCBSSSHHHHHHHHHHHHHHHHH--SCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEE
T ss_pred ----CCCccCCHHHHHHHHHHHHHHHhc--CCeEEEEeecCCCcccccccCCCCccCCCCcccccccccccccccccccc
Confidence 122344433345555555555554 6789999852 0
Q ss_pred --CCH------------HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCcc--ccccccccChhHHHHHHHHHh
Q 014581 160 --YNK------------AAWEELIDRVEETGIDAIEVNFSC---------PHGMPER--KMGAAVGQDCRLLEEVCGWIN 214 (422)
Q Consensus 160 --~~~------------~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~~--~~G~~l~~~~~~v~~iv~~vr 214 (422)
..+ ++|.++|+++.++|+|+||||.+| |++ +.| .||++++++++.+.+++++||
T Consensus 144 ~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~-N~R~D~yGGslenr~r~~~eiv~avr 222 (365)
T 2gou_A 144 DVAVPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEA-NNRSDEYGGSLENRLRFLDEVVAALV 222 (365)
T ss_dssp ECCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGG-CCCCSTTSSSHHHHTHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCc-cCcCcccCcchhhhHHHHHHHHHHHH
Confidence 112 688899999999999999999876 765 333 588999999999999999999
Q ss_pred hccCc-cEEEEECCCCC-----------ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 215 AKATV-PVWAKMTPNIT-----------DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 215 ~~~~i-Pv~vKl~~~~~-----------~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
+.+.. ||.||++++.. +..++++.+.++|+|+|.++++... . .+ +
T Consensus 223 ~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------~-~~-----------~---- 279 (365)
T 2gou_A 223 DAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWD-------D-AP-----------D---- 279 (365)
T ss_dssp HHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTT-------B-CC-----------C----
T ss_pred HHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC-------C-CC-----------C----
Confidence 98732 99999998521 2567899999999999999986421 0 00 0
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.| ++.++++++.+ ++|||++||| +++++.++|..| ||+|++||+++.+ |++++++.++
T Consensus 280 --~~--~~~~~~i~~~~-------~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~-P~l~~~~~~g 338 (365)
T 2gou_A 280 --TP--VSFKRALREAY-------QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIAN-PDLPERLRHG 338 (365)
T ss_dssp --CC--HHHHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHHC-TTHHHHHHHT
T ss_pred --cc--HHHHHHHHHHC-------CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHhC-chHHHHHHcC
Confidence 12 35667788876 7999999999 899999999998 9999999999999 9999998765
No 25
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.91 E-value=1.9e-22 Score=202.08 Aligned_cols=246 Identities=15% Similarity=0.167 Sum_probs=180.0
Q ss_pred ceEeCCeecCCCceecCCCCCC--------CHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT--------NYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~--------~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
+.++++++|+|+|++|++.... +...++.+.+ +|+|.|+++.+...+. +... .+
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~--g~~~---------------~~ 70 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQ--AKGY---------------AG 70 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSST--TCCS---------------TT
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEcccccccc--ccCC---------------CC
Confidence 4688999999999999865421 3444554443 7999999998876431 1111 11
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC------------C---------------------------
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME------------E--------------------------- 159 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~------------~--------------------------- 159 (422)
.++++++.-++.|.+....+++. +.++++||.. +
T Consensus 71 -----~~gi~~d~~i~~~~~l~~~vh~~--g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~ 143 (364)
T 1vyr_A 71 -----APGLHSPEQIAAWKKITAGVHAE--DGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRV 143 (364)
T ss_dssp -----CCBSSSHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEE
T ss_pred -----CcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeccCCcccCcccccCCCccccCCCccccccccccccccccccc
Confidence 12334433345555544445543 6789999851 0
Q ss_pred --CCH------------HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhh
Q 014581 160 --YNK------------AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 160 --~~~------------~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
..+ ++|.+.|++++++|+|+||||.+| |++... ..||++++++++.+.+++++||+
T Consensus 144 ~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~ 223 (364)
T 1vyr_A 144 DTTTPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCN 223 (364)
T ss_dssp ECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHH
Confidence 112 688899999999999999999876 765322 25889999999999999999999
Q ss_pred ccC-ccEEEEECCC--CC----------ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 216 KAT-VPVWAKMTPN--IT----------DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 216 ~~~-iPv~vKl~~~--~~----------~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
.+. .||.||++++ +. +..++++.++++|+|+|.++++... . . +
T Consensus 224 ~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------~--------------~---~ 279 (364)
T 1vyr_A 224 EWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLA-------G--------------G---K 279 (364)
T ss_dssp HSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT-------B--------------C---C
T ss_pred hcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCccc-------C--------------C---C
Confidence 883 3999999986 32 1456799999999999999975321 0 0 0
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
. .+ ++.++++++.+ ++|||++||| +++++.++++.| ||+|++||+++.+ |++++++.++
T Consensus 280 ~-~~--~~~~~~v~~~~-------~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~-P~~~~~~~~g 339 (364)
T 1vyr_A 280 P-YS--EAFRQKVRERF-------HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIAN-PDLVARLQKK 339 (364)
T ss_dssp C-CC--HHHHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHT
T ss_pred c-cc--HHHHHHHHHHC-------CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhC-hhHHHHHHcC
Confidence 0 01 35667788876 7999999999 899999999998 9999999999999 9999998754
No 26
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.91 E-value=1e-22 Score=202.26 Aligned_cols=249 Identities=14% Similarity=0.168 Sum_probs=181.6
Q ss_pred ceEeCCeecCCCceecCCCCCC-------CH---HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT-------NY---TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~-------~~---~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+.++.+++|+|.|+.|++.... +. +.+.+.++.|+|.|+++.+...+. +...|
T Consensus 7 P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~--g~~~~--------------- 69 (343)
T 3kru_A 7 PLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESR--GRITD--------------- 69 (343)
T ss_dssp CEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG--GCSST---------------
T ss_pred cceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhc--Ccccc---------------
Confidence 5678999999999999854321 22 334444557899999998776441 11111
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C---------------------------CC-------H
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E---------------------------YN-------K 162 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~---------------------------~~-------~ 162 (422)
..+++|++.-++.|.+....+++. +..+++||.- | .+ .
T Consensus 70 -----~~~gi~~d~~i~~~~~~~~~vh~~--G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii 142 (343)
T 3kru_A 70 -----HDLGIWNDEQVKELKKIVDICKAN--GAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIV 142 (343)
T ss_dssp -----TSCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHH
T ss_pred -----ccccccCHHHHHHHHHHHHHHhcC--CceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHH
Confidence 122444444466666655566553 6678888841 0 01 3
Q ss_pred HHHHHHHHHHHHhCCCEEEEc---------cCCCCCCCc-cccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-
Q 014581 163 AAWEELIDRVEETGIDAIEVN---------FSCPHGMPE-RKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI- 229 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN---------~scP~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~- 229 (422)
++|.+.|++++++|+|+|||| |.||++... ..||++++++.+.+.+++++||+++ ++||.||++++-
T Consensus 143 ~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~ 222 (343)
T 3kru_A 143 KAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDY 222 (343)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCS
T ss_pred HHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhh
Confidence 577888999999999999999 889987422 2589999999999999999999998 789999999841
Q ss_pred -------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 230 -------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 230 -------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
++..++++.+.++ +|+|.++..... + .+.+ ...+ ..++.++++++.+
T Consensus 223 ~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~----~----~~~~------~~~~--------~~~~~~~~ir~~~--- 276 (343)
T 3kru_A 223 MEGGINIDMMVEYINMIKDK-VDLIDVSSGGLL----N----VDIN------LYPG--------YQVKYAETIKKRC--- 276 (343)
T ss_dssp STTSCCHHHHHHHHHHHTTT-CSEEEEECCCSS----C----CCCC------CCTT--------TTHHHHHHHHHHH---
T ss_pred hccCccHHHHHHHHHHhhcc-ccEEeccCCceE----e----eeec------ccCc--------eeehHHHHHHHhc---
Confidence 2357889999999 999999642211 0 0000 0011 1356677888877
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHH
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~ 351 (422)
++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.
T Consensus 277 ----~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lan-Pdl~~k~~ 321 (343)
T 3kru_A 277 ----NIKTSAVGLITTQELAEEILSNERADLVALGRELLRN-PYWVLHTY 321 (343)
T ss_dssp ----TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHTC
T ss_pred ----CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcC-CeEEEEEe
Confidence 79999999999999999999998 9999999999999 99998876
No 27
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.91 E-value=3.4e-22 Score=197.85 Aligned_cols=255 Identities=16% Similarity=0.233 Sum_probs=185.3
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCC----CCHH--HHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPG----TNYT--VMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~----~~~~--~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
...+|++|+++|.++..||++|+.-.. .++| ..+.+.++|.-+++ .|.+
T Consensus 54 v~~~d~~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~l-St~s------------------------ 108 (352)
T 3sgz_A 54 MSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVI-SSYA------------------------ 108 (352)
T ss_dssp CSSCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEE-CTTC------------------------
T ss_pred CCCCCCceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEe-CCCC------------------------
Confidence 356799999999999999999962211 2344 34555556666543 1111
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC-ccc
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP-ERK 194 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~-~~~ 194 (422)
+ .++|++.+ ..++.|...|+-...+.+...++.++++++|+.+|-+.+-.|.... +++
T Consensus 109 --------s------~s~e~v~~-------~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d 167 (352)
T 3sgz_A 109 --------S------YSLEDIVA-------AAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRD 167 (352)
T ss_dssp --------S------SCHHHHHH-------HSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHH
T ss_pred --------C------CCHHHHHH-------hccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhh
Confidence 0 01343322 2346788888753446677778888999999999988887765311 000
Q ss_pred --cc---------------------cc---cccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEE
Q 014581 195 --MG---------------------AA---VGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVS 248 (422)
Q Consensus 195 --~G---------------------~~---l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~ 248 (422)
.| .. -..++...++.++++++.+++||++|.... .+.|+.+.++|+|+|+
T Consensus 168 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~----~e~A~~a~~~GaD~I~ 243 (352)
T 3sgz_A 168 KRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILT----KEDAELAMKHNVQGIV 243 (352)
T ss_dssp HHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEECS----HHHHHHHHHTTCSEEE
T ss_pred hhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCc----HHHHHHHHHcCCCEEE
Confidence 00 00 113566778899999999999999998743 5789999999999999
Q ss_pred EecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh
Q 014581 249 AINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328 (422)
Q Consensus 249 v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a 328 (422)
++|+.+. .+| + + |.+++.+.++++.+.+ ++|||++|||.+++|+.++|++
T Consensus 244 vsn~GG~--~~d----------------~---~----~~~~~~L~~i~~av~~-----~ipVia~GGI~~g~Dv~kaLal 293 (352)
T 3sgz_A 244 VSNHGGR--QLD----------------E---V----SASIDALREVVAAVKG-----KIEVYMDGGVRTGTDVLKALAL 293 (352)
T ss_dssp ECCGGGT--SSC----------------S---S----CCHHHHHHHHHHHHTT-----SSEEEEESSCCSHHHHHHHHHT
T ss_pred EeCCCCC--ccC----------------C---C----ccHHHHHHHHHHHhCC-----CCeEEEECCCCCHHHHHHHHHc
Confidence 9997431 111 1 1 4467888899888753 7999999999999999999999
Q ss_pred CCCEEEEhhHHHh----hhh----HHHHHHHHHHHHHHHHcCCCCHHHhhcCCccc
Q 014581 329 GANTVQVCTGVMM----HGY----GLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376 (422)
Q Consensus 329 GAd~V~vgtall~----~Gp----~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~~ 376 (422)
||++||+||++++ .|+ .+++.+.++|+.+|...|+.+++|+++..+-|
T Consensus 294 GA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~y 349 (352)
T 3sgz_A 294 GARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349 (352)
T ss_dssp TCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBSS
T ss_pred CCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcchh
Confidence 9999999999986 344 36889999999999999999999998765543
No 28
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.91 E-value=6.2e-23 Score=203.46 Aligned_cols=268 Identities=20% Similarity=0.214 Sum_probs=176.1
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCC-CCH-----HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPG-TNY-----TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~-~~~-----~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
.+.+|++|+++|.++++||++|++..+ ... ...+.+.++|.+.++ ++....
T Consensus 43 ~~~~d~~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~-~~~~~~---------------------- 99 (332)
T 1vcf_A 43 LSEVDLTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMML-GSGRIL---------------------- 99 (332)
T ss_dssp GGGCCCCEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEE-EECHHH----------------------
T ss_pred CCCCCcceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEe-CCchhc----------------------
Confidence 456899999999999999999986542 232 334555567877544 333210
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeC----CCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP 191 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~----~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~ 191 (422)
+.+++ .+.|.+ + +...++.|+++|+. .+.+++...++++. .++|++++|+.+.+...
T Consensus 100 ------le~~~------~~~~~q-l---~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~---~~~~a~~i~~n~~~~~~ 160 (332)
T 1vcf_A 100 ------LERPE------ALRSFR-V---RKVAPKALLIANLGLAQLRRYGRDDLLRLVEM---LEADALAFHVNPLQEAV 160 (332)
T ss_dssp ------HHCTT------THHHHC-C---TTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHH---HTCSEEEEECCHHHHHH
T ss_pred ------ccCCC------ccceEE-e---eccCCCceeecccChhhhhccChHHHHHHHhh---cCCCceeeccchHHHHh
Confidence 11111 122322 2 22235889998885 23455665555443 47899998875321100
Q ss_pred ccccccccccChhHHHHHHHHHhhccCccEEEE-ECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCC-CC
Q 014581 192 ERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK-MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE-PC 269 (422)
Q Consensus 192 ~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vK-l~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~-~~ 269 (422)
.+ | ..+.+.+.++++++++ +++||++| +..+ ...+.++.+.++|+|+|+++|+.+. ...+++..+.. +.
T Consensus 161 -~~-~---~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g--~~~e~a~~~~~~G~d~I~vs~~ggt-~~~~~~~~r~~~~~ 231 (332)
T 1vcf_A 161 -QR-G---DTDFRGLVERLAELLP-LPFPVMVKEVGHG--LSREAALALRDLPLAAVDVAGAGGT-SWARVEEWVRFGEV 231 (332)
T ss_dssp -TT-S---CCCCTTHHHHHHHHCS-CSSCEEEECSSSC--CCHHHHHHHTTSCCSEEECCCBTSC-CHHHHHHTC-----
T ss_pred -cC-C---CccHHHHHHHHHHHHc-CCCCEEEEecCCC--CCHHHHHHHHHcCCCEEEeCCCCCC-cchhHHHhhccccc
Confidence 00 0 0122236788999999 89999999 4433 2467799999999999999887542 12233221110 00
Q ss_pred CCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh---hhh--
Q 014581 270 VEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM---HGY-- 344 (422)
Q Consensus 270 ~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~---~Gp-- 344 (422)
...+...+|. ..++.+.++++.++ ++|||++|||.+++|+.++|++|||+||+||++++ .|+
T Consensus 232 ~~~~~~~~g~-------~~~~~l~~v~~~~~------~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~~~G~~g 298 (332)
T 1vcf_A 232 RHPELCEIGI-------PTARAILEVREVLP------HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAER 298 (332)
T ss_dssp ---CCTTCSC-------BHHHHHHHHHHHCS------SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHHTTCHHH
T ss_pred hhhhHhhccc-------cHHHHHHHHHHhcC------CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHHhccHHH
Confidence 0000011222 24577788888763 69999999999999999999999999999999995 444
Q ss_pred --HHHHHHHHHHHHHHHHcCCCCHHHhhcCC
Q 014581 345 --GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373 (422)
Q Consensus 345 --~~i~~i~~~l~~~m~~~G~~si~d~~G~~ 373 (422)
.+++.+.++|+.+|..+|+.+++|+++..
T Consensus 299 v~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 299 VAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 67899999999999999999999998753
No 29
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.90 E-value=3.1e-22 Score=202.90 Aligned_cols=256 Identities=10% Similarity=0.068 Sum_probs=181.0
Q ss_pred ceEeCCeecCCCceecCCCCCC------CHHHHHHHHH--cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT------NYTVMKRAFD--EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~------~~~~~~~~~~--~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~ 119 (422)
+.++++++|+|+|++|++.... +...+....+ .|+|.|+++.+...+ .+... .+
T Consensus 21 P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~--~g~~~---------------~~- 82 (402)
T 2hsa_B 21 PYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISP--TSAGF---------------PH- 82 (402)
T ss_dssp CEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESST--TCCCS---------------TT-
T ss_pred CeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeecc--ccccC---------------CC-
Confidence 5789999999999999865432 3333332222 269999999877643 11111 11
Q ss_pred cccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC------------C---------------------------C
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME------------E---------------------------Y 160 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~------------~---------------------------~ 160 (422)
.++++++.-++.|.+....+++. +.++++||.. + .
T Consensus 83 ----~~gi~~d~~i~~~k~l~~avh~~--G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~ 156 (402)
T 2hsa_B 83 ----VPGIFTKEQVREWKKIVDVVHAK--GAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYP 156 (402)
T ss_dssp ----CCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECC
T ss_pred ----CcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCC
Confidence 22334433345555544455543 6789998851 0 1
Q ss_pred CH------------HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhccC
Q 014581 161 NK------------AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 161 ~~------------~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.+ ++|.++|++++++|+|+||||.+| |.+... ..||++++++++.+.+|+++||+++.
T Consensus 157 ~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg 236 (402)
T 2hsa_B 157 KPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIG 236 (402)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhC
Confidence 12 688999999999999999999976 886322 25899999999999999999999883
Q ss_pred -ccEEEEECCCC-----C------ChHHHHHHHHHcC------CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCC
Q 014581 219 -VPVWAKMTPNI-----T------DITEPARVALRSG------SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280 (422)
Q Consensus 219 -iPv~vKl~~~~-----~------~~~~~a~~l~~aG------adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~s 280 (422)
.||.||++++. . +..++++.++++| +|+|.++++... .....|. .-++
T Consensus 237 ~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~-----~~~~~~~---------~~~~ 302 (402)
T 2hsa_B 237 ADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYV-----AYGQTEA---------GRLG 302 (402)
T ss_dssp GGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCC-----TTTTSSS---------TTTT
T ss_pred CCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccc-----cccCCcc---------cccc
Confidence 59999999852 1 2578899999999 999999986421 0000010 0000
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.+ ...++.++++++.+ ++|||++||| +++++.++|..| ||+|++||+++.+ |++++++.++
T Consensus 303 ~~---~~~~~~~~~vk~~~-------~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~d-P~l~~k~~~g 364 (402)
T 2hsa_B 303 SE---EEEARLMRTLRNAY-------QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISN-PDLVMRIKLN 364 (402)
T ss_dssp HH---HHHHHHHHHHHHHC-------SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHT
T ss_pred CC---cchHHHHHHHHHHC-------CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhC-chHHHHHHhC
Confidence 00 01256677788776 7999999999 999999999998 9999999999999 9999998765
No 30
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.90 E-value=1.7e-22 Score=203.31 Aligned_cols=247 Identities=13% Similarity=0.064 Sum_probs=179.4
Q ss_pred ceEeCCeecCCCceecCCCCCC------CHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT------NYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~------~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
+.++++++|+|+|++|++.... +...++.+.+ +|+|.|+++.+...+. +... .+
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~--g~~~---------------~~-- 74 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPT--ARGY---------------VY-- 74 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGG--GCCB---------------TT--
T ss_pred CeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccc--cccC---------------CC--
Confidence 4788999999999999866321 4455555443 7899999998876431 1110 11
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCC-----------------------------------------
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE----------------------------------------- 159 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~----------------------------------------- 159 (422)
.++++++.-++.|......+++. +.++++||...
T Consensus 75 ---~~gi~~d~~i~~~k~l~~avh~~--G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~ 149 (377)
T 2r14_A 75 ---TPGIWTDAQEAGWKGVVEAVHAK--GGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHP 149 (377)
T ss_dssp ---CCBSSSHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEE
T ss_pred ---CcccCCHHHHHHHHHHHHHHhhc--CCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccC
Confidence 22334433344555444445543 67889988520
Q ss_pred -CCH------------HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhc
Q 014581 160 -YNK------------AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAK 216 (422)
Q Consensus 160 -~~~------------~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~ 216 (422)
..+ ++|.++|++++++|+|+||||.+| |++... ..||++++++++.+.+++++||++
T Consensus 150 ~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a 229 (377)
T 2r14_A 150 TSTPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEV 229 (377)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHH
Confidence 012 688999999999999999999987 876322 258899999999999999999998
Q ss_pred cC-ccEEEEECCCC-----------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 217 AT-VPVWAKMTPNI-----------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 217 ~~-iPv~vKl~~~~-----------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
+. .||.||++++. .+..++++.+.++|+|+|.++++... .. ..+.
T Consensus 230 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~-------~~--------------~~~~-- 286 (377)
T 2r14_A 230 FGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWI-------GG--------------DITY-- 286 (377)
T ss_dssp HCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC---------------------------CC--
T ss_pred cCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc-------CC--------------CCcc--
Confidence 84 39999999851 12567899999999999999985421 00 0010
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+ ++.++++++.+ ++|||++||| +++++.++++.| ||+|++||+++.+ |++++++.++
T Consensus 287 -~--~~~~~~ik~~~-------~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~-P~l~~k~~~g 344 (377)
T 2r14_A 287 -P--EGFREQMRQRF-------KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIAN-PDLPERFRLG 344 (377)
T ss_dssp -C--TTHHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHT
T ss_pred -h--HHHHHHHHHHC-------CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhC-chHHHHHHcC
Confidence 1 24566788776 7999999999 699999999998 9999999999999 9999998754
No 31
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.90 E-value=7.1e-23 Score=222.82 Aligned_cols=258 Identities=10% Similarity=0.080 Sum_probs=182.7
Q ss_pred ceEeCCeecCCCceecCCCCCCC---H----HHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGTN---Y----TVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~~---~----~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
++++++++|+|||++|++..... . +.+.+.++.|+|.++++.++..+. +...| .+
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~--~~~~~--------------~~-- 73 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPE--SDDTH--------------RL-- 73 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTT--SCCTT--------------SC--
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCc--ccCCC--------------CC--
Confidence 47889999999999999754321 1 223444457999999999887541 11101 00
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCC--------------------------C------------CH
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE--------------------------Y------------NK 162 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~--------------------------~------------~~ 162 (422)
.++++++..++.|.+....+++. +.++++||... . ..
T Consensus 74 ---~~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i 148 (729)
T 1o94_A 74 ---SARIWDEGDVRNLKAMTDEVHKY--GALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQ 148 (729)
T ss_dssp ---CEECSSHHHHHHHHHHHHHHHTT--TCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHH
T ss_pred ---CCccCChHHhHHHHHHHHHHHhC--CCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHH
Confidence 12334433355565555555542 78999999631 0 03
Q ss_pred HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhcc--CccEEEEECCC--
Q 014581 163 AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-- 228 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-- 228 (422)
++|.++|++++++|+|+||||.+| |.+... ..||++++++++.+.+|+++||+++ +.||++|++++
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~ 228 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTV 228 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccC
Confidence 688899999999999999999988 766322 2589999999999999999999998 89999999863
Q ss_pred --------CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhh
Q 014581 229 --------ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300 (422)
Q Consensus 229 --------~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~ 300 (422)
.++..++++.+++ |+|.+.+++.... ..+.....+ .+.++ ...+..++++++.+
T Consensus 229 ~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~--~~~~~~~~~-----------~~~~~---~~~~~~~~~i~~~~- 290 (729)
T 1o94_A 229 YGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIA--EWGEDAGPS-----------RFYQQ---GHTIPWVKLVKQVS- 290 (729)
T ss_dssp SCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCST--TGGGTSCCT-----------TTCCT---TTTHHHHHHHHTTC-
T ss_pred cCCCCCCchHHHHHHHHHHHh-hcCEEEEeeeccc--ccccccCCc-----------cccCc---cccHHHHHHHHHHC-
Confidence 2346778888876 7999988875311 011000000 01111 11245666777765
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 301 SEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 301 ~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
++|||++|||.+++++.++|+.| ||+|++||+++.+ |++++++.++
T Consensus 291 ------~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~-P~~~~~~~~g 337 (729)
T 1o94_A 291 ------KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIAD-PFLPQKVEQG 337 (729)
T ss_dssp ------SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHC-TTHHHHHHTT
T ss_pred ------CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcC-chHHHHHHcC
Confidence 89999999999999999999998 9999999999999 9999998765
No 32
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.90 E-value=6.4e-22 Score=198.35 Aligned_cols=253 Identities=17% Similarity=0.139 Sum_probs=182.3
Q ss_pred ceEeCCeecCCCceecCCCCC------CCHH---HHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPG------TNYT---VMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~------~~~~---~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
+.++.+++|+|.|+.|++... .+.. .+.+.++.|+|.|+++.+...+. +...| +
T Consensus 7 P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~--g~~~~---------------~ 69 (363)
T 3l5l_A 7 PYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE--GRITP---------------G 69 (363)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGG--GCSST---------------T
T ss_pred CeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCcc--ccCCC---------------C
Confidence 567899999999999986531 1222 34444557999999998876541 21111 1
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-------------------------------------C--
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-------------------------------------E-- 159 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-------------------------------------~-- 159 (422)
.++++++.-++.|.+....+++. +..+++||.- +
T Consensus 70 -----~~~i~~d~~i~~~~~~~~~vh~~--G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~ 142 (363)
T 3l5l_A 70 -----CAGIWSDAHAQAFVPVVQAIKAA--GSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLP 142 (363)
T ss_dssp -----CCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBC
T ss_pred -----cceecCHHHHHHHHHHHHHHHhc--CCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCC
Confidence 22344443455665555555543 4566666631 0
Q ss_pred -----CC-------HHHHHHHHHHHHHhCCCEEEEccC---------CCCCCCcc--ccccccccChhHHHHHHHHHhhc
Q 014581 160 -----YN-------KAAWEELIDRVEETGIDAIEVNFS---------CPHGMPER--KMGAAVGQDCRLLEEVCGWINAK 216 (422)
Q Consensus 160 -----~~-------~~~~~~~a~~~~~aGaD~iElN~s---------cP~~~~~~--~~G~~l~~~~~~v~~iv~~vr~~ 216 (422)
.+ .++|.+.|++++++|+|+||||.. ||++ +.| .||++++++.+.+.+++++||+.
T Consensus 143 ~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~a 221 (363)
T 3l5l_A 143 KVPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHS-NKRTDAYGGSFDNRSRFLLETLAAVREV 221 (363)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCc-CCCCcccCcCHHHHHHHHHHHHHHHHHH
Confidence 01 246778899999999999999965 7887 333 58999999999999999999999
Q ss_pred c--CccEEEEECCCC---------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 217 A--TVPVWAKMTPNI---------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 217 ~--~iPv~vKl~~~~---------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+ ++||.||++++. ++..++++.+.++|+|+|.++++.... ....+ .++
T Consensus 222 vg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-----~~~~~-------------~~~--- 280 (363)
T 3l5l_A 222 WPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIP-----DTNIP-------------WGP--- 280 (363)
T ss_dssp SCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSS-----CCCCC-------------CCT---
T ss_pred cCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-----ccccC-------------CCc---
Confidence 8 689999999741 235678999999999999999753210 00000 011
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
...+..++++++.+ ++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.++|
T Consensus 281 ~~~~~~~~~ir~~~-------~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lan-Pdl~~k~~~~l 342 (363)
T 3l5l_A 281 AFMGPIAERVRREA-------KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLAD-PHWAYFAAKEL 342 (363)
T ss_dssp TTTHHHHHHHHHHH-------TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHC-TTHHHHHHHHT
T ss_pred chhHHHHHHHHHHc-------CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhC-chHHHHHHHHc
Confidence 11245677788877 79999999999999999999999 9999999999998 99999988775
No 33
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.89 E-value=5.4e-22 Score=199.59 Aligned_cols=248 Identities=11% Similarity=0.081 Sum_probs=176.3
Q ss_pred ceEeCCeecCCCceecCCCCCC------CHHHHHHHHH-c-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT------NYTVMKRAFD-E-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~------~~~~~~~~~~-~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~ 119 (422)
+.++++++|+|+|++|++.-.. +...+..+.+ + |+|.|+++.+...+. +... .
T Consensus 19 P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~--g~~~---------------~-- 79 (376)
T 1icp_A 19 PCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISET--GIGY---------------K-- 79 (376)
T ss_dssp CEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGG--GCCS---------------T--
T ss_pred CeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccc--cccC---------------c--
Confidence 3788999999999999865432 3333333222 3 899999998876431 1111 1
Q ss_pred cccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C------------------------------------CCH
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E------------------------------------YNK 162 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~------------------------------------~~~ 162 (422)
..++++++.-++.|.+....+++. +.++++||.. | ..+
T Consensus 80 ---~~~gi~~d~~i~~~k~l~~avh~~--G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p 154 (376)
T 1icp_A 80 ---DVPGIWTKEQVEAWKPIVDAVHAK--GGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRP 154 (376)
T ss_dssp ---TCCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCC
T ss_pred ---ccCccCCHHHHHHHHHHHHHHHhc--CCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCC
Confidence 122344433344555544455543 6789999852 0 012
Q ss_pred ------------HHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhccC-c
Q 014581 163 ------------AAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKAT-V 219 (422)
Q Consensus 163 ------------~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~-i 219 (422)
++|.+.|++++++|+|+||||.+| |.+... ..||++++++++.+.+++++||+++. .
T Consensus 155 ~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~ 234 (376)
T 1icp_A 155 RRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD 234 (376)
T ss_dssp EECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC
Confidence 688999999999999999999986 775322 25889999999999999999999884 3
Q ss_pred cEEEEECCCCC-----------ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 220 PVWAKMTPNIT-----------DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 220 Pv~vKl~~~~~-----------~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
||.||++++.. +..++++.+.++|+|+|.++++... ...+ +. . .
T Consensus 235 ~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~-------~~~~-----------~~---~----~ 289 (376)
T 1icp_A 235 RVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMK-------TAWE-----------KI---E----C 289 (376)
T ss_dssp GEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCC-------C------------------------C
T ss_pred ceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCccc-------CCCC-----------cc---c----c
Confidence 99999997521 1468899999999999999976421 0000 00 0 0
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
++.++++++.+ ++|||++||| +++++.++|..| ||+|++||+++.+ |++++++.++
T Consensus 290 ~~~~~~vr~~~-------~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~-P~l~~k~~~g 346 (376)
T 1icp_A 290 TESLVPMRKAY-------KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISN-PDLPKRFELN 346 (376)
T ss_dssp CCCSHHHHHHC-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHT
T ss_pred HHHHHHHHHHc-------CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhC-ccHHHHHHcC
Confidence 12344577776 7999999999 899999999988 9999999999999 9999998754
No 34
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.89 E-value=1.1e-21 Score=211.50 Aligned_cols=257 Identities=11% Similarity=0.063 Sum_probs=187.4
Q ss_pred ceEeCCeecCCCceecCCCCCC----C-----HHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT----N-----YTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~----~-----~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
+.++++++|+|+|++|++.... + .+.+++.++.|+|.++++.+...+. +... .
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~--~~~~---------------~- 69 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLT--GVGM---------------E- 69 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSST--TCSB---------------T-
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCcc--ccCC---------------C-
Confidence 4678999999999999876421 1 1334445567999999999876431 1100 0
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCC---------------------CCH------------HHH
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE---------------------YNK------------AAW 165 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~---------------------~~~------------~~~ 165 (422)
..+++|++..++.|.+....+++. +.++++||... ..+ ++|
T Consensus 70 ----~~~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~ 143 (671)
T 1ps9_A 70 ----GGAMLNDASQIPHHRTITEAVHQE--GGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNF 143 (671)
T ss_dssp ----TCCBCCSGGGHHHHHHHHHHHHHT--TCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHH
T ss_pred ----CCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHH
Confidence 123455555577776666566653 67999999631 012 678
Q ss_pred HHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC----
Q 014581 166 EELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI---- 229 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~---- 229 (422)
.+.|++++++|+|+||||.+| |++... ..||++++++++.+.+++++||+.+ ++||++|++++.
T Consensus 144 ~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~ 223 (671)
T 1ps9_A 144 ARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVED 223 (671)
T ss_dssp HHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTT
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCC
Confidence 889999999999999999876 765322 2589999999999999999999998 899999999742
Q ss_pred ----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 230 ----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 230 ----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.+..++++.+.++|+|+|.+++++.. .. .|.. ....++ ...++.++++++.+
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~-~~------~~~~--------~~~~~~---~~~~~~~~~i~~~~------ 279 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHE-AR------IPTI--------ATPVPR---GAFSWVTRKLKGHV------ 279 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTT-CS------SCSS--------STTSCT---TTTHHHHHHHTTSC------
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccc-cc------cccc--------cccCCc---chHHHHHHHHHHhc------
Confidence 13568899999999999999875431 00 1100 001111 11245556666654
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.+++
T Consensus 280 -~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~-P~l~~k~~~g~ 327 (671)
T 1ps9_A 280 -SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLAD-AELLSKAQSGR 327 (671)
T ss_dssp -SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHC-TTHHHHHHTTC
T ss_pred -CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhC-cHHHHHHHcCC
Confidence 79999999999999999999998 9999999999999 99999987664
No 35
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.88 E-value=2.7e-21 Score=193.09 Aligned_cols=247 Identities=15% Similarity=0.102 Sum_probs=177.9
Q ss_pred CCCCCc--ceEeCCeecCCCceecCCCCCC-------CHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCC
Q 014581 42 SAEPDL--SITVNGLQMPNPFVIGSGPPGT-------NYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111 (422)
Q Consensus 42 ~~~~dL--~~~~~Gl~l~nPi~~AAg~~~~-------~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~ 111 (422)
..|++| +.++++++|+|.|+.|++.... +...+....+ +.+|.|+++.+...+. +...|
T Consensus 7 ~~~~~~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~--g~~~~--------- 75 (361)
T 3gka_A 7 HHMPSLFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQ--GVGYA--------- 75 (361)
T ss_dssp --CCCTTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGG--GCCST---------
T ss_pred ccCccccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeeccc--ccCCC---------
Confidence 456665 6788999999999999865422 2233333322 4589999988776441 11111
Q ss_pred CCCCcccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C-------------------------------
Q 014581 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E------------------------------- 159 (422)
Q Consensus 112 ~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~------------------------------- 159 (422)
+ .++++++.-++.|.+....+++. +..+++||.- |
T Consensus 76 ------~-----~~gi~~d~~i~~~k~l~~avH~~--G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~ 142 (361)
T 3gka_A 76 ------S-----TPGIWSPEQVDGWRLVTDAVHAA--GGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQ 142 (361)
T ss_dssp ------T-----CCBSSSHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSC
T ss_pred ------C-----CCccCCHHHHHHHHHHHHHHHhc--CCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccc
Confidence 1 22344444456666555555553 5567777631 0
Q ss_pred --C------C-------HHHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHh
Q 014581 160 --Y------N-------KAAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWIN 214 (422)
Q Consensus 160 --~------~-------~~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr 214 (422)
. + .++|.+.|+++.++|+|+||||.+| |.+... ..||++++++.+.+.+++++||
T Consensus 143 ~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr 222 (361)
T 3gka_A 143 RPYVTPRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAI 222 (361)
T ss_dssp CBCCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHH
T ss_pred cCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHH
Confidence 0 0 3567888999999999999999988 876322 2588999999999999999999
Q ss_pred hccC-ccEEEEECCCC-----------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 215 AKAT-VPVWAKMTPNI-----------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 215 ~~~~-iPv~vKl~~~~-----------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
+++. -||.||++++. .+..++++.+.++|+|.|.++++.. |+
T Consensus 223 ~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--------------------------~~ 276 (361)
T 3gka_A 223 DVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG--------------------------GD 276 (361)
T ss_dssp HHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS--------------------------TT
T ss_pred HHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC--------------------------CH
Confidence 9883 39999999852 1246789999999999999886421 11
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
+ .++++++.+ ++|||++||| +++++.+++..| ||+|++||+++.+ |++++++.++.
T Consensus 277 ---~----~~~~ik~~~-------~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~lad-Pdl~~k~~~g~ 333 (361)
T 3gka_A 277 ---A----IGQQLKAAF-------GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIAN-PDLPRRFKLNA 333 (361)
T ss_dssp ---C----CHHHHHHHH-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHTC
T ss_pred ---H----HHHHHHHHc-------CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhC-cHHHHHHHhCC
Confidence 1 245677776 7899999999 999999999998 9999999999999 99999998764
No 36
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.88 E-value=1.1e-20 Score=190.34 Aligned_cols=248 Identities=14% Similarity=0.114 Sum_probs=176.6
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCC----C--CHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPG----T--NYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~----~--~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
.+++|++|+|+|.++++||++|++..+ . +....+.+.++|.++++. |++..+
T Consensus 57 ~~~~d~st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vs-s~s~~~--------------------- 114 (380)
T 1p4c_A 57 VSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLS-TASNMS--------------------- 114 (380)
T ss_dssp CSSCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEEC-TTCSSC---------------------
T ss_pred CccCcceeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecC-ccccCC---------------------
Confidence 678899999999999999999985331 2 234455566789987653 432110
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc-----------
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF----------- 184 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~----------- 184 (422)
+++. .. . ++.|...|+.... .+...+.+++++++|+.++++-+
T Consensus 115 -----------------le~i----~~---~-~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d 168 (380)
T 1p4c_A 115 -----------------IEDL----AR---Q-CDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERD 168 (380)
T ss_dssp -----------------HHHH----HH---H-CCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHH
T ss_pred -----------------HHHH----Hh---c-cCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccccchhHH
Confidence 2221 11 1 2567888885222 45566778888888998888743
Q ss_pred ---CCCC--CCCcc------------cccccc---cc---ChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHH
Q 014581 185 ---SCPH--GMPER------------KMGAAV---GQ---DCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALR 241 (422)
Q Consensus 185 ---scP~--~~~~~------------~~G~~l---~~---~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~ 241 (422)
+|+. ..... ..+.++ .+ +++...++++++++.+++||++|.. ...+.++.+.+
T Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv----~t~e~a~~a~~ 244 (380)
T 1p4c_A 169 LHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGL----LSAEDADRCIA 244 (380)
T ss_dssp HHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEE----CCHHHHHHHHH
T ss_pred HhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEec----CcHHHHHHHHH
Confidence 3421 00000 000111 11 5666778999999999999999964 34678999999
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHH
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~d 321 (422)
+|+|+|+++|+.+. .. .++ +..++.+.++++.+ +.|||++|||.+++|
T Consensus 245 aGad~I~vs~~gg~--~~----------------d~~-------~~~~~~l~~v~~~~-------~~pVia~GGI~~~~d 292 (380)
T 1p4c_A 245 EGADGVILSNHGGR--QL----------------DCA-------ISPMEVLAQSVAKT-------GKPVLIDSGFRRGSD 292 (380)
T ss_dssp TTCSEEEECCGGGT--SC----------------TTC-------CCGGGTHHHHHHHH-------CSCEEECSSCCSHHH
T ss_pred cCCCEEEEcCCCCC--cC----------------CCC-------cCHHHHHHHHHHHc-------CCeEEEECCCCCHHH
Confidence 99999999875421 11 111 12356677888877 569999999999999
Q ss_pred HHHHHHhCCCEEEEhhHHHhhhh---------HHHHHHHHHHHHHHHHcCCCCHHHhhcCCc
Q 014581 322 AAEFILLGANTVQVCTGVMMHGY---------GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374 (422)
Q Consensus 322 a~~~l~aGAd~V~vgtall~~Gp---------~~i~~i~~~l~~~m~~~G~~si~d~~G~~~ 374 (422)
+.+++++||++|++||+++.. . ..++.+.++|+.+|..+|+.+++|+++..+
T Consensus 293 v~kal~~GAdaV~iGr~~l~~-~~~~g~~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l 353 (380)
T 1p4c_A 293 IVKALALGAEAVLLGRATLYG-LAARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYL 353 (380)
T ss_dssp HHHHHHTTCSCEEESHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGE
T ss_pred HHHHHHhCCcHhhehHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeE
Confidence 999999999999999999864 4 368889999999999999999999998754
No 37
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.87 E-value=7.1e-21 Score=190.07 Aligned_cols=241 Identities=15% Similarity=0.127 Sum_probs=175.0
Q ss_pred ceEeCCeecCCCceecCCCCCC-------CHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGT-------NYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~-------~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~ 119 (422)
+.++.+++|+|.|+.|++.... +...+....+ +.+|.|+++.+...+. +...| +
T Consensus 7 P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~--g~~~~---------------~- 68 (362)
T 4ab4_A 7 PIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPM--GVGYP---------------D- 68 (362)
T ss_dssp CEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGG--GCCST---------------T-
T ss_pred CeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEeccc--ccCCC---------------C-
Confidence 5778999999999999865422 2333333332 4589999987776441 11111 1
Q ss_pred cccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C---------------------------------------
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E--------------------------------------- 159 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~--------------------------------------- 159 (422)
.++++++.-++.|.+....+++. +..+++||.- |
T Consensus 69 ----~~gi~~d~~i~~~k~l~~avH~~--G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~ 142 (362)
T 4ab4_A 69 ----TPGIWNDEQVRGWNNVTKAVHAA--GGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRA 142 (362)
T ss_dssp ----CCBCSSHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEE
T ss_pred ----CCCcCCHHHHHHHHHHHHHHHhc--CCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCc
Confidence 22344444466666555555553 5566777631 0
Q ss_pred CC-------HHHHHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhccC-ccE
Q 014581 160 YN-------KAAWEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKAT-VPV 221 (422)
Q Consensus 160 ~~-------~~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~-iPv 221 (422)
.+ .++|.+.|+++.++|+|+||||.+| |.+... ..||++++++.+.+.+++++||+++. .||
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v 222 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRV 222 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCce
Confidence 01 2467788899999999999999988 876322 25899999999999999999999873 399
Q ss_pred EEEECCCC-----------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 222 WAKMTPNI-----------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 222 ~vKl~~~~-----------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
.||++++- .+..++++.+.++|+|.|.++++.. |+ +
T Consensus 223 ~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--------------------------~~---~---- 269 (362)
T 4ab4_A 223 GVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREA--------------------------DD---S---- 269 (362)
T ss_dssp EEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC--------------------------TT---C----
T ss_pred EEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC--------------------------CH---H----
Confidence 99999862 1246789999999999999986420 11 1
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
.++++++.+ ++|||++||| +++++.+++..| ||+|++||+++.+ |++++++.++.
T Consensus 270 ~~~~ik~~~-------~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lan-Pdl~~k~~~g~ 325 (362)
T 4ab4_A 270 IGPLIKEAF-------GGPYIVNERF-DKASANAALASGKADAVAFGVPFIAN-PDLPARLAADA 325 (362)
T ss_dssp CHHHHHHHH-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHTTC
T ss_pred HHHHHHHHC-------CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhC-cHHHHHHHcCC
Confidence 235677776 7899999999 999999999998 9999999999999 99999988763
No 38
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.87 E-value=3.1e-21 Score=196.27 Aligned_cols=256 Identities=15% Similarity=0.169 Sum_probs=180.9
Q ss_pred ceEe-CCeecCCCceecCCCCC-------CCHHHHHHHHH-c-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 48 SITV-NGLQMPNPFVIGSGPPG-------TNYTVMKRAFD-E-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 48 ~~~~-~Gl~l~nPi~~AAg~~~-------~~~~~~~~~~~-~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+.++ +|++|+|.|+.|++... .+...+....+ + |+|.|+++.+...+ .+...|
T Consensus 30 P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~--~g~~~~--------------- 92 (419)
T 3l5a_A 30 SIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEP--YGKLFE--------------- 92 (419)
T ss_dssp CEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSG--GGCCST---------------
T ss_pred CEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCc--ccccCC---------------
Confidence 5778 89999999999985432 12333333322 3 89999999877654 121111
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C-------------------------------CC----
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E-------------------------------YN---- 161 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~-------------------------------~~---- 161 (422)
+ .++++++.-++.|.+....+++. +..+++||.- | .+
T Consensus 93 ~-----~~gi~~d~~i~~~k~l~~avh~~--G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI 165 (419)
T 3l5a_A 93 Y-----GFNIDHDACIPGLTNMASTMKQH--GSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKI 165 (419)
T ss_dssp T-----CEECSSGGGHHHHHHHHHHHHTT--SCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHH
T ss_pred C-----ccccccHHHHHHHHHHHHHHHhc--CCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHH
Confidence 1 12344444467776666666553 5677777741 0 01
Q ss_pred ---HHHHHHHHHHHHHhCCCEEEEccCC---------CCCCCcc--cccccc-ccChhHHHHHHHHHhhcc------Ccc
Q 014581 162 ---KAAWEELIDRVEETGIDAIEVNFSC---------PHGMPER--KMGAAV-GQDCRLLEEVCGWINAKA------TVP 220 (422)
Q Consensus 162 ---~~~~~~~a~~~~~aGaD~iElN~sc---------P~~~~~~--~~G~~l-~~~~~~v~~iv~~vr~~~------~iP 220 (422)
.++|.++|+++.++|+|+||||.+| |.+ +.| .||+++ +++.+.+.+|+++||+++ +.|
T Consensus 166 ~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~-N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~ 244 (419)
T 3l5a_A 166 NSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFS-NRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFI 244 (419)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTT-CCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcc-cccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCee
Confidence 2467788999999999999999887 876 333 589999 999999999999999876 679
Q ss_pred EEEEECCC----------CCChHHHHHHHHH-cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHH
Q 014581 221 VWAKMTPN----------ITDITEPARVALR-SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289 (422)
Q Consensus 221 v~vKl~~~----------~~~~~~~a~~l~~-aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al 289 (422)
|.+|++++ .++..++++.+.+ +|+|+|.++++....... . .+ ..|+.. ..
T Consensus 245 v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~---~-~~------------~~g~~~---~~ 305 (419)
T 3l5a_A 245 LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQN---T-SR------------TPGDHF---GR 305 (419)
T ss_dssp EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGC---B-CC------------CSSTTT---TS
T ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccc---c-cC------------CCCccc---cH
Confidence 99999983 1245788999999 999999999864311000 0 00 111110 11
Q ss_pred HHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 290 ~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
..++.+++.+.+ ++|||++|||.+++++.+++.. ||+|++||+++.+ |++++++.++.
T Consensus 306 ~~a~~Ik~~v~~-----~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ian-Pdlv~ki~~G~ 363 (419)
T 3l5a_A 306 PVNQIVYEHLAG-----RIPLIASGGINSPESALDALQH-ADMVGMSSPFVTE-PDFVHKLAEQR 363 (419)
T ss_dssp BHHHHHHHHHTT-----SSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHC-TTHHHHHHTTC
T ss_pred HHHHHHHHHcCC-----CCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHC-cHHHHHHHcCC
Confidence 244567777642 6999999999999999999999 9999999999999 99999987653
No 39
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.87 E-value=1.5e-20 Score=186.47 Aligned_cols=244 Identities=14% Similarity=0.139 Sum_probs=174.1
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHc-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDE-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
.+++|++|+++|+++++||++|++....+.+..+.+.+. |+|.++.+.
T Consensus 31 ~~~vdl~t~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~------------------------------- 79 (336)
T 1ypf_A 31 RSECDTTVTLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQ------------------------------- 79 (336)
T ss_dssp GGGCBCCEEETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSS-------------------------------
T ss_pred cccCcceEEECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCC-------------------------------
Confidence 467899999999999999999998876777766666665 455432110
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhC--CCEEEEccCCCCCCCccccccc
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG--IDAIEVNFSCPHGMPERKMGAA 198 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aG--aD~iElN~scP~~~~~~~~G~~ 198 (422)
.+ ..+.+ ++++++. +.|+.++++ ..++++ +.++.+.++| +|++++|++. |
T Consensus 80 ----~~-----~~~~~---i~~~~~~--g~~v~v~~g--~~~~~~-~~a~~~~~~g~~~~~i~i~~~~---------G-- 131 (336)
T 1ypf_A 80 ----PE-----KRISF---IRDMQSR--GLIASISVG--VKEDEY-EFVQQLAAEHLTPEYITIDIAH---------G-- 131 (336)
T ss_dssp ----GG-----GHHHH---HHHHHHT--TCCCEEEEC--CSHHHH-HHHHHHHHTTCCCSEEEEECSS---------C--
T ss_pred ----CH-----HHHHH---HHHHHhc--CCeEEEeCC--CCHHHH-HHHHHHHhcCCCCCEEEEECCC---------C--
Confidence 00 02333 4444442 568899974 455544 5567777888 9999999741 1
Q ss_pred cccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCC
Q 014581 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278 (422)
Q Consensus 199 l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG 278 (422)
++....++++++++.++.|+++|- ++.+ .+.|+.+.++|+|+|+++|+... .++ + .+ ..+
T Consensus 132 ---~~~~~~~~i~~lr~~~~~~~vi~G--~v~s-~e~A~~a~~aGad~Ivvs~hgG~--~~~--~-~~---------~~~ 191 (336)
T 1ypf_A 132 ---HSNAVINMIQHIKKHLPESFVIAG--NVGT-PEAVRELENAGADATKVGIGPGK--VCI--T-KI---------KTG 191 (336)
T ss_dssp ---CSHHHHHHHHHHHHHCTTSEEEEE--EECS-HHHHHHHHHHTCSEEEECSSCST--TCH--H-HH---------HHS
T ss_pred ---CcHHHHHHHHHHHHhCCCCEEEEC--CcCC-HHHHHHHHHcCCCEEEEecCCCc--eee--c-cc---------ccC
Confidence 456778899999998865666663 2222 57899999999999999886431 111 0 00 011
Q ss_pred CCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh-----------------
Q 014581 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM----------------- 341 (422)
Q Consensus 279 ~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~----------------- 341 (422)
...+ ...+..+.++++.+ ++|||++|||.+++|+.+++++||++||+||+++.
T Consensus 192 ~g~~---g~~~~~l~~v~~~~-------~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k 261 (336)
T 1ypf_A 192 FGTG---GWQLAALRWCAKAA-------SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYK 261 (336)
T ss_dssp CSST---TCHHHHHHHHHHTC-------SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC--------
T ss_pred cCCc---hhHHHHHHHHHHHc-------CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEee
Confidence 1111 11456778888765 79999999999999999999999999999999993
Q ss_pred --hh---------h-----------------HHHHHHHHHHHHHHHHcCCCCHHHhhcCCc
Q 014581 342 --HG---------Y-----------------GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374 (422)
Q Consensus 342 --~G---------p-----------------~~i~~i~~~l~~~m~~~G~~si~d~~G~~~ 374 (422)
.| . .+++.+.++|+..|...|+++++|+....+
T Consensus 262 ~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~ 322 (336)
T 1ypf_A 262 EYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDY 322 (336)
T ss_dssp ---------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCE
T ss_pred eeecccchhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCE
Confidence 22 1 578899999999999999999999976433
No 40
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.85 E-value=1.6e-20 Score=203.15 Aligned_cols=254 Identities=15% Similarity=0.155 Sum_probs=180.4
Q ss_pred ceEeCCeecCCCceecCCCCC---CCHHHH----HHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPG---TNYTVM----KRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~---~~~~~~----~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
+.++++++|+|+|++|++... .+...+ ...++.|+|.|+++.+...+. +...|. ..
T Consensus 17 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~--~~~~~~--------------~~- 79 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHAT--SDIAPF--------------IE- 79 (690)
T ss_dssp CCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGG--GCCTTS--------------CC-
T ss_pred CeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccc--cccCCC--------------cC-
Confidence 477899999999999986532 222222 233457999999998877541 211110 01
Q ss_pred ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C------------------------C---------------
Q 014581 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E------------------------Y--------------- 160 (422)
Q Consensus 121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~------------------------~--------------- 160 (422)
.+++++.-++.|.+....+++. +.++++||.. | .
T Consensus 80 ----~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~ 153 (690)
T 3k30_A 80 ----LRIWDDQDLPALKRIADAIHEG--GGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDD 153 (690)
T ss_dssp ----EECSSGGGHHHHHHHHHHHHHT--TCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHH
T ss_pred ----CccCCHHHHHHHHHHHHHHHhc--CCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHH
Confidence 1334444477777766666653 7799999962 0 0
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCC----------CCCcc--ccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPH----------GMPER--KMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~----------~~~~~--~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
..++|.++|++++++|+|+||||.+|+. + +.| .||++++++.+++.+|+++||+++ +.||.+|++
T Consensus 154 ~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~-N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s 232 (690)
T 3k30_A 154 LRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRY-NQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRIT 232 (690)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCcc-CCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 0378889999999999999999765544 4 333 589999999999999999999988 789999998
Q ss_pred CCC--------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 227 PNI--------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 227 ~~~--------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
++- ++..++++.+.+ |+|.+.++....... ...+. + ...++ .+..++++++.
T Consensus 233 ~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~-----~~~~~-----~-~~~~~--------~~~~~~~i~~~ 292 (690)
T 3k30_A 233 VEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGD-----SVTSR-----F-APEGR--------QEEFVAGLKKL 292 (690)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHH-----TCCTT-----T-CCTTT--------THHHHTTSGGG
T ss_pred ccccCCCCCCHHHHHHHHHHHHh-hcCEEEEeccccccc-----CCCCc-----c-CCccc--------cHHHHHHHHHH
Confidence 852 135678888877 899999887542110 00000 0 00111 13445556655
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+ ++|||++|||.+++++.+++..| ||+|++||+++.+ |++++++.++
T Consensus 293 ~-------~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~-P~~~~~~~~g 340 (690)
T 3k30_A 293 T-------TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIAD-PFLPNKIRDG 340 (690)
T ss_dssp C-------SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHTT
T ss_pred c-------CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhC-ccHHHHHHcC
Confidence 4 89999999999999999999988 9999999999999 9999998765
No 41
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.84 E-value=1.6e-19 Score=181.69 Aligned_cols=153 Identities=12% Similarity=0.032 Sum_probs=122.8
Q ss_pred HHHHHHHHHHH-HhCCCEEEEccCC---------CCCCCc--ccccc-ccccChhHHHHHHHHHhhccC-ccEEEEECCC
Q 014581 163 AAWEELIDRVE-ETGIDAIEVNFSC---------PHGMPE--RKMGA-AVGQDCRLLEEVCGWINAKAT-VPVWAKMTPN 228 (422)
Q Consensus 163 ~~~~~~a~~~~-~aGaD~iElN~sc---------P~~~~~--~~~G~-~l~~~~~~v~~iv~~vr~~~~-iPv~vKl~~~ 228 (422)
++|.+.|+++. ++|+|+||||.+| |++... ..||+ +++++.+.+.+++++||+++. .||.+|++++
T Consensus 174 ~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~ 253 (379)
T 3aty_A 174 PLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPL 253 (379)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcc
Confidence 45567888888 8999999999875 776322 24788 999999999999999999874 4899999995
Q ss_pred C-----------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 229 I-----------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 229 ~-----------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
. .+..++++.+.++|+|+|.++++... . + ++ |. + ++++++
T Consensus 254 ~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-------~--~-----------~~------~~--~-~~~ir~ 304 (379)
T 3aty_A 254 NGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV-------N--Q-----------QI------GD--V-VAWVRG 304 (379)
T ss_dssp CCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT-------S--C-----------CC------CC--H-HHHHHT
T ss_pred cccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC-------C--C-----------Cc------cH--H-HHHHHH
Confidence 2 12567899999999999999975311 0 0 01 21 4 556776
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.+ ++|||++||| +++++.++|..| ||+|++||+++.+ |++++++.++
T Consensus 305 ~~-------~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~-P~l~~k~~~g 352 (379)
T 3aty_A 305 SY-------SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIAN-PDLVERAQQN 352 (379)
T ss_dssp TC-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC-TTHHHHHHHT
T ss_pred HC-------CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhC-cHHHHHHHcC
Confidence 65 7999999999 999999999998 9999999999999 9999998765
No 42
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.84 E-value=6.5e-19 Score=179.02 Aligned_cols=284 Identities=15% Similarity=0.156 Sum_probs=175.2
Q ss_pred CCCCCcceEeC-CeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581 42 SAEPDLSITVN-GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120 (422)
Q Consensus 42 ~~~~dL~~~~~-Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~ 120 (422)
..++|++|+|+ |+++++||++|++....+.+...++.++|...++.++.+.+.. .... ++..+... . + ...+.-
T Consensus 26 ~~~vdlst~l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~-~~~~-~~~~~~~~-~-~-g~~~~~ 100 (404)
T 1eep_A 26 PSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQ-RKEI-EKVKTYKF-Q-K-TINTNG 100 (404)
T ss_dssp GGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHH-HHHH-HHHHTCC------------
T ss_pred ccccccceeccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHH-HHHH-HHHHhhcc-C-C-Cceecc
Confidence 45789999999 9999999999998877889998888888765566677665321 0000 00000000 0 0 000000
Q ss_pred c--cccccccCCC---hHHHHHHHHHHHH-------hhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCC
Q 014581 121 G--WENIELISDR---PLETMLKEFKQLK-------ALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPH 188 (422)
Q Consensus 121 G--l~n~~~~s~~---~~e~~l~~i~~~k-------~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~ 188 (422)
. +....++... .+++..+.+.... +..++.+++++++. +. ++.+.++.+.++|+|+|++|.++
T Consensus 101 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~--~~-~~~~~a~~~~~~G~d~i~i~~~~-- 175 (404)
T 1eep_A 101 DTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSI--DI-DTIERVEELVKAHVDILVIDSAH-- 175 (404)
T ss_dssp -----------------------------CCTTCCBCTTSCBCCEEEECS--CT-THHHHHHHHHHTTCSEEEECCSC--
T ss_pred ccccccccccccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCC--Ch-hHHHHHHHHHHCCCCEEEEeCCC--
Confidence 0 0000011000 0111111111111 11113468899962 22 35566777778899999998542
Q ss_pred CCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCC
Q 014581 189 GMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267 (422)
Q Consensus 189 ~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~ 267 (422)
. +++.+.++++++|+.+ ++||+++-.. ..+.++.+.++|+|+|++ +...+ . + .+.+
T Consensus 176 g------------~~~~~~e~i~~ir~~~~~~pviv~~v~----~~~~a~~a~~~Gad~I~v-g~~~G-~-~--~~~~-- 232 (404)
T 1eep_A 176 G------------HSTRIIELIKKIKTKYPNLDLIAGNIV----TKEAALDLISVGADCLKV-GIGPG-S-I--CTTR-- 232 (404)
T ss_dssp C------------SSHHHHHHHHHHHHHCTTCEEEEEEEC----SHHHHHHHHTTTCSEEEE-CSSCS-T-T--SHHH--
T ss_pred C------------ChHHHHHHHHHHHHHCCCCeEEEcCCC----cHHHHHHHHhcCCCEEEE-CCCCC-c-C--cCcc--
Confidence 1 2467888999999988 8999985322 257899999999999998 32111 0 0 0000
Q ss_pred CCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh------
Q 014581 268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM------ 341 (422)
Q Consensus 268 ~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~------ 341 (422)
..+++.++ .+..+.++++.+.. .++|||++|||.+++|+.+++++|||+|++||+++.
T Consensus 233 -------~~~~~g~p-----~~~~l~~v~~~~~~----~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 233 -------IVAGVGVP-----QITAICDVYEACNN----TNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp -------HHHCCCCC-----HHHHHHHHHHHHTT----SSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSS
T ss_pred -------ccCCCCcc-----hHHHHHHHHHHHhh----cCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCc
Confidence 01222222 23455566665432 279999999999999999999999999999999952
Q ss_pred -------------------------------------------hh-----------hHHHHHHHHHHHHHHHHcCCCCHH
Q 014581 342 -------------------------------------------HG-----------YGLVKRLCEELKDFMKMHNFSSIE 367 (422)
Q Consensus 342 -------------------------------------------~G-----------p~~i~~i~~~l~~~m~~~G~~si~ 367 (422)
+| -.+++.+.++|+..|...|+++++
T Consensus 297 ~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~ 376 (404)
T 1eep_A 297 EEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATIS 376 (404)
T ss_dssp CEEEETTEEEEC------------------------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHH
T ss_pred chhhhCCeEEeecCCCCCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 12 156888999999999999999999
Q ss_pred HhhcCCc
Q 014581 368 DFRGASI 374 (422)
Q Consensus 368 d~~G~~~ 374 (422)
|++....
T Consensus 377 ~l~~~~~ 383 (404)
T 1eep_A 377 DLKINSK 383 (404)
T ss_dssp HHHHSCC
T ss_pred HHhhcCc
Confidence 9987643
No 43
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.80 E-value=1.4e-17 Score=165.82 Aligned_cols=243 Identities=16% Similarity=0.114 Sum_probs=167.3
Q ss_pred CCCCcceEeC-----CeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 43 AEPDLSITVN-----GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 43 ~~~dL~~~~~-----Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+++|++|+++ |++++.||+.|++....+.+...++.++|.-.++.++.+
T Consensus 38 ~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~s-------------------------- 91 (351)
T 2c6q_A 38 SEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYS-------------------------- 91 (351)
T ss_dssp GGCBCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTCC--------------------------
T ss_pred ccceeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCCC--------------------------
Confidence 5789999998 999999999999887778888888888763223222211
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHh--CCCEEEEccCCCCCCCcccc
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET--GIDAIEVNFSCPHGMPERKM 195 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~a--GaD~iElN~scP~~~~~~~~ 195 (422)
.+++.+.+++..... .++.++++ .+.+++.+ ++.+.+. |+|+++++++. .
T Consensus 92 ---------------~e~~~~~i~~~p~~l--~~v~~~~g--~~~~~~~~-~~~l~~~~~g~~~i~i~~~~--g------ 143 (351)
T 2c6q_A 92 ---------------LVQWQEFAGQNPDCL--EHLAASSG--TGSSDFEQ-LEQILEAIPQVKYICLDVAN--G------ 143 (351)
T ss_dssp ---------------HHHHHHHHHHCGGGC--TTEEEEEC--SSHHHHHH-HHHHHHHCTTCCEEEEECSC--T------
T ss_pred ---------------HHHHHHHHhhCchhh--heeEeecC--CChHHHHH-HHHHHhccCCCCEEEEEecC--C------
Confidence 233333333211111 24777774 34555444 4444454 89999987531 1
Q ss_pred ccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCC
Q 014581 196 GAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274 (422)
Q Consensus 196 G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~ 274 (422)
++..+.+.++++|+.+ ++||++|... + .+.|+.+.++|+|+|++.+.... + ++.+.
T Consensus 144 ------~~~~~~~~i~~lr~~~~~~~vi~g~v~---t-~e~A~~a~~aGaD~I~v~~g~G~---~--~~~r~-------- 200 (351)
T 2c6q_A 144 ------YSEHFVEFVKDVRKRFPQHTIMAGNVV---T-GEMVEELILSGADIIKVGIGPGS---V--CTTRK-------- 200 (351)
T ss_dssp ------TBHHHHHHHHHHHHHCTTSEEEEEEEC---S-HHHHHHHHHTTCSEEEECSSCST---T--BCHHH--------
T ss_pred ------CcHHHHHHHHHHHHhcCCCeEEEEeCC---C-HHHHHHHHHhCCCEEEECCCCCc---C--cCccc--------
Confidence 2345778899999988 8999998543 2 57899999999999988754321 1 10000
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh-------------
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM------------- 341 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~------------- 341 (422)
..+. |. | .+..+.++++.+.. .++|||+.|||.++.|+.++|++||++|++||.++.
T Consensus 201 -~~g~-~~---p-~~~~l~~v~~~~~~----~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g 270 (351)
T 2c6q_A 201 -KTGV-GY---P-QLSAVMECADAAHG----LKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDG 270 (351)
T ss_dssp -HHCB-CC---C-HHHHHHHHHHHHHH----TTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETT
T ss_pred -cCCC-Cc---c-HHHHHHHHHHHHhh----cCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcC
Confidence 0111 11 2 23455556555432 279999999999999999999999999999999972
Q ss_pred ----------------------------hh-----------hHHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 342 ----------------------------HG-----------YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 342 ----------------------------~G-----------p~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
+| -.++..+..+|+..|...|..+++|++..
T Consensus 271 ~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~ 340 (351)
T 2c6q_A 271 KKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRR 340 (351)
T ss_dssp EEEEEEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHH
T ss_pred eeeeeccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhC
Confidence 33 24688999999999999999999999754
No 44
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.78 E-value=3.9e-18 Score=172.01 Aligned_cols=252 Identities=12% Similarity=0.101 Sum_probs=173.4
Q ss_pred ceEeCCeecCCCceecCCCCC-------CCHHHHHHHHH---cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 48 SITVNGLQMPNPFVIGSGPPG-------TNYTVMKRAFD---EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~-------~~~~~~~~~~~---~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+.++.+++|+|.|+.|++.-. .+...+....+ .|+|.|+++.+...+. +...|
T Consensus 17 P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~--g~~~~--------------- 79 (407)
T 3tjl_A 17 SIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQ--ASGYE--------------- 79 (407)
T ss_dssp CEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGG--GCCCS---------------
T ss_pred CeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCc--cCCCC---------------
Confidence 677899999999999985431 12333333322 4799999998776441 11111
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C-------------------------------------
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E------------------------------------- 159 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~------------------------------------- 159 (422)
+ ..++++++.-++.|.+....+++. +..+++||.. |
T Consensus 80 ~----~~~gi~~d~~i~~~k~l~~avH~~--G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~ 153 (407)
T 3tjl_A 80 G----AAPGIWTDKHAKAWKVITDKVHAN--GSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNP 153 (407)
T ss_dssp S----BCCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCC
T ss_pred C----cCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCC
Confidence 1 013444444466666655566553 5677777741 0
Q ss_pred ---CC-------HHH-HHHHHHHHHHhCCCEEEEccCC---------CCCCCc-cccccccccChhHHHHHHHHHhhccC
Q 014581 160 ---YN-------KAA-WEELIDRVEETGIDAIEVNFSC---------PHGMPE-RKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 160 ---~~-------~~~-~~~~a~~~~~aGaD~iElN~sc---------P~~~~~-~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.+ .++ |.+.|+++.++|+|+||||..| |.+... ..||++++++.+.+.+|+++||+.+.
T Consensus 154 pr~lt~~eI~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~ 233 (407)
T 3tjl_A 154 VRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVG 233 (407)
T ss_dssp CEECCHHHHHHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhC
Confidence 00 134 7788888999999999999998 876322 25899999999999999999999874
Q ss_pred -ccEEEEECCCCC--------C-------hHHHHHHH---HHcC--CCEEEEec-CCcccccccccCCCCCCCCCCCCcc
Q 014581 219 -VPVWAKMTPNIT--------D-------ITEPARVA---LRSG--SEGVSAIN-TIMSVMGIDLKTLRPEPCVEGYSTP 276 (422)
Q Consensus 219 -iPv~vKl~~~~~--------~-------~~~~a~~l---~~aG--adgi~v~n-~~~~~~~id~e~~~p~~~~~~~~~~ 276 (422)
.||.+|+++.-. + ...+++.| .+.| +++|.++. +... ..+. .
T Consensus 234 ~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~--~~~~--------------~ 297 (407)
T 3tjl_A 234 ADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSG--NVDV--------------S 297 (407)
T ss_dssp GGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEET--TEEC--------------C
T ss_pred CCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCC--CCcC--------------C
Confidence 489999998421 2 36778888 8889 99999984 2211 0000 0
Q ss_pred CCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh---C-CCEEEEhhHHHhhhhHHHHHHHH
Q 014581 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL---G-ANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 277 gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a---G-Ad~V~vgtall~~Gp~~i~~i~~ 352 (422)
..+. ...+..+++.+ ++|||++|||.+.+|+.+++.. | ||+|++||+++.+ |++++++.+
T Consensus 298 ~~~~--------~~~~~~ir~~~-------~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaN-PdL~~ri~~ 361 (407)
T 3tjl_A 298 EEDQ--------AGDNEFVSKIW-------KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSN-PNLVWKLRD 361 (407)
T ss_dssp GGGC--------CCCSHHHHHHC-------CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHC-TTHHHHHHH
T ss_pred ccch--------hHHHHHHHHHh-------CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhC-chHHHHHHc
Confidence 0000 01123456665 6899999999999988888876 5 9999999999999 999999987
Q ss_pred HH
Q 014581 353 EL 354 (422)
Q Consensus 353 ~l 354 (422)
++
T Consensus 362 g~ 363 (407)
T 3tjl_A 362 GI 363 (407)
T ss_dssp TC
T ss_pred CC
Confidence 74
No 45
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=6.3e-18 Score=171.16 Aligned_cols=279 Identities=14% Similarity=0.107 Sum_probs=171.7
Q ss_pred CCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCC---eeEeecCCCCCCCccc
Q 014581 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTP---RYARLRAGANGSAKGQ 118 (422)
Q Consensus 42 ~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~p---r~~~~~~~~~~~a~~~ 118 (422)
.+++|++|+++|+++++||++|++....+.+..+++.++|..+++...... + +..++.. .+....... ..+
T Consensus 52 ~~~vdlst~l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~-~-~~~~~~~~~eeia~~~~~~----d~~ 125 (393)
T 2qr6_A 52 SKDVDTTWHIDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLW-G-RHADLDEAIAKVIAAYEEG----DQA 125 (393)
T ss_dssp GGGCBCCEEETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSST-T-TCSCHHHHHHHHHHHHHHH----HHH
T ss_pred hhHCCceeEEcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEeccee-c-ccCCchhHHHHHHHHHHhc----CCC
Confidence 567899999999999999999998765778888888888876666541100 0 0011000 000000000 000
Q ss_pred ccccccc-ccc-CCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccc
Q 014581 119 IIGWENI-ELI-SDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMG 196 (422)
Q Consensus 119 ~~Gl~n~-~~~-s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G 196 (422)
+|.+.. ..+ .....+.+.+.++++++. +.++++++. .. .+.+.++.++++|+|+++++.. +.. ..++
T Consensus 126 -~g~~~~~q~~~~~~d~~~~~~~i~~~~~~--g~~v~~~v~-~~---~~~e~a~~~~~agad~i~i~~~-~~~---~~~~ 194 (393)
T 2qr6_A 126 -AATRTLQELHAAPLDTELLSERIAQVRDS--GEIVAVRVS-PQ---NVREIAPIVIKAGADLLVIQGT-LIS---AEHV 194 (393)
T ss_dssp -HHHHHHHHHHHSCCCHHHHHHHHHHHHHT--TSCCEEEEC-TT---THHHHHHHHHHTTCSEEEEECS-SCC---SSCC
T ss_pred -ccchhhhhcccccCCHHHHHHHHHHHhhc--CCeEEEEeC-Cc---cHHHHHHHHHHCCCCEEEEeCC-ccc---cccC
Confidence 000000 001 111345566677777764 678999886 22 3455667777889999999843 211 0111
Q ss_pred cccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCcc
Q 014581 197 AAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276 (422)
Q Consensus 197 ~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~ 276 (422)
.++...+-+.++++.+++||++|.. .+ .+.++.+.++|+|+|++.+...+. +..
T Consensus 195 -----~~~~~~~~i~~l~~~~~~pvi~ggi---~t-~e~a~~~~~~Gad~i~vg~Gg~~~--------~~~--------- 248 (393)
T 2qr6_A 195 -----NTGGEALNLKEFIGSLDVPVIAGGV---ND-YTTALHMMRTGAVGIIVGGGENTN--------SLA--------- 248 (393)
T ss_dssp -----CC-----CHHHHHHHCSSCEEEECC---CS-HHHHHHHHTTTCSEEEESCCSCCH--------HHH---------
T ss_pred -----CCcccHHHHHHHHHhcCCCEEECCc---CC-HHHHHHHHHcCCCEEEECCCcccc--------ccc---------
Confidence 1111122245677777999999743 23 567899999999999995521110 000
Q ss_pred CCCCCCCcchhHHHHHHHHHHH-------hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-------
Q 014581 277 GGYSCKAVHPIALGKVMSIAKM-------MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH------- 342 (422)
Q Consensus 277 gG~sG~~i~p~al~~v~~i~~~-------~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~------- 342 (422)
.+ .| +..++.+.++++. +.+ .++|||++|||.+++|+.+++++||++|++||+++..
T Consensus 249 ~~-~g----~~~~~~l~~v~~~~~~~~~~~~~----~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~ 319 (393)
T 2qr6_A 249 LG-ME----VSMATAIADVAAARRDYLDETGG----RYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKG 319 (393)
T ss_dssp TS-CC----CCHHHHHHHHHHHHHHHHHHHTS----CCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTT
T ss_pred CC-CC----CChHHHHHHHHHHHHHhHhhcCC----cceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCce
Confidence 01 11 1235666666665 321 0299999999999999999999999999999997431
Q ss_pred ---h-----------h------------HHHH-------------HHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 343 ---G-----------Y------------GLVK-------------RLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 343 ---G-----------p------------~~i~-------------~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
| . .+.+ .+.++|+..|...|+++++|++..
T Consensus 320 ~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~ 388 (393)
T 2qr6_A 320 YFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKV 388 (393)
T ss_dssp EECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTC
T ss_pred EEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhc
Confidence 1 0 1122 346999999999999999999753
No 46
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.76 E-value=6.7e-17 Score=160.61 Aligned_cols=234 Identities=15% Similarity=0.154 Sum_probs=164.1
Q ss_pred CCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccccccc
Q 014581 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWEN 124 (422)
Q Consensus 45 ~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n 124 (422)
.+++|++.|++++.||+.|++-...+.++.+++.++|.-+++-+ |
T Consensus 30 ~~~~t~l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~-----------------------------------~ 74 (361)
T 3r2g_A 30 TTSTDRLGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHR-----------------------------------F 74 (361)
T ss_dssp CCEECTTSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCS-----------------------------------C
T ss_pred ceeeEEECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeC-----------------------------------C
Confidence 55667999999999999999766567888888888863222210 0
Q ss_pred ccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChh
Q 014581 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 125 ~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
. ++|++.+++++. ...+.++++ +.+...+.++++.++|+|.|+++.++.+ ++
T Consensus 75 ~------s~ee~~~~i~~~-----~~~~~~~~g---~~~~~~e~~~~a~~aGvdvI~id~a~G~--------------~~ 126 (361)
T 3r2g_A 75 M------TIEENIQEFKKC-----KGPVFVSVG---CTENELQRAEALRDAGADFFCVDVAHAH--------------AK 126 (361)
T ss_dssp S------CHHHHHHHHHTC-----CSCCBEEEC---SSHHHHHHHHHHHHTTCCEEEEECSCCS--------------SH
T ss_pred C------CHHHHHHHHhhc-----ceEEEEEcC---CCHHHHHHHHHHHHcCCCEEEEeCCCCC--------------cH
Confidence 0 156666655543 235666664 2345677889999999999999975433 23
Q ss_pred HHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCC
Q 014581 205 LLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283 (422)
Q Consensus 205 ~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~ 283 (422)
.+.++++++|+.. ++||++|-.. ..+.|+.+.++|+|+|.+.+.... ..+ +. ...|. |
T Consensus 127 ~~~e~I~~ir~~~~~~~Vi~G~V~----T~e~A~~a~~aGaD~I~Vg~g~G~--~~~--tr----------~~~g~-g-- 185 (361)
T 3r2g_A 127 YVGKTLKSLRQLLGSRCIMAGNVA----TYAGADYLASCGADIIKAGIGGGS--VCS--TR----------IKTGF-G-- 185 (361)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEC----SHHHHHHHHHTTCSEEEECCSSSS--CHH--HH----------HHHCC-C--
T ss_pred hHHHHHHHHHHhcCCCeEEEcCcC----CHHHHHHHHHcCCCEEEEcCCCCc--Ccc--cc----------ccCCc-c--
Confidence 4677889999876 7999998332 256799999999999998543211 000 00 00111 1
Q ss_pred cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh---------------------
Q 014581 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH--------------------- 342 (422)
Q Consensus 284 i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~--------------------- 342 (422)
.| .+..|.++++.. . |||++|||.+++|+.++|++|||+||+||+|+..
T Consensus 186 -~p-~l~aI~~~~~~~-------~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~G 255 (361)
T 3r2g_A 186 -VP-MLTCIQDCSRAD-------R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRG 255 (361)
T ss_dssp -CC-HHHHHHHHTTSS-------S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESC
T ss_pred -HH-HHHHHHHHHHhC-------C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEec
Confidence 13 345555554432 3 9999999999999999999999999999998631
Q ss_pred ------------------------------hh--HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 343 ------------------------------GY--GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 343 ------------------------------Gp--~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
|+ +++..+..+|+.-|.-.|..+|+||+..
T Consensus 256 m~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 256 MASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp CHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred CCCcchhhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 11 4577888999999999999999999654
No 47
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.76 E-value=4e-16 Score=155.78 Aligned_cols=213 Identities=17% Similarity=0.178 Sum_probs=150.0
Q ss_pred CCCCCCCcceEeC-CeecCCCceecCCCCCCCHHHHHHHHHc-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 40 SASAEPDLSITVN-GLQMPNPFVIGSGPPGTNYTVMKRAFDE-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 40 ~~~~~~dL~~~~~-Gl~l~nPi~~AAg~~~~~~~~~~~~~~~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
+..+++||++++. ++.++.||+.+++....+.++..++++. |+|++. +
T Consensus 27 ~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~-~----------------------------- 76 (361)
T 3khj_A 27 VLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIH-K----------------------------- 76 (361)
T ss_dssp CCGGGCCCCEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEEC-S-----------------------------
T ss_pred CCHHHccCceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEe-c-----------------------------
Confidence 4456789999998 8999999999998877778877777764 556442 1
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA 197 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~ 197 (422)
|. +.+++.+.++++++. .+.|+.++++. .+ .+.++.+.++|+|.|+||.+..
T Consensus 77 ------~~------s~e~~~~~I~~vk~~-~~~pvga~ig~-~~----~e~a~~l~eaGad~I~ld~a~G---------- 128 (361)
T 3khj_A 77 ------NM------DMESQVNEVLKVKNS-GGLRVGAAIGV-NE----IERAKLLVEAGVDVIVLDSAHG---------- 128 (361)
T ss_dssp ------SS------CHHHHHHHHHHHHHT-TCCCCEEEECT-TC----HHHHHHHHHTTCSEEEECCSCC----------
T ss_pred ------CC------CHHHHHHHHHHHHhc-cCceEEEEeCC-CH----HHHHHHHHHcCcCeEEEeCCCC----------
Confidence 00 156677778888764 47899999963 22 4566777788999999996421
Q ss_pred ccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccC
Q 014581 198 AVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277 (422)
Q Consensus 198 ~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~g 277 (422)
+++.+.+.++++++..++||+++... ..+.++.+.++|+|+|.+.... + .+ .+.+. ..
T Consensus 129 ----~~~~~~~~i~~i~~~~~~~Vivg~v~----t~e~A~~l~~aGaD~I~VG~~~-G--s~--~~tr~---------~~ 186 (361)
T 3khj_A 129 ----HSLNIIRTLKEIKSKMNIDVIVGNVV----TEEATKELIENGADGIKVGIGP-G--SI--CTTRI---------VA 186 (361)
T ss_dssp ----SBHHHHHHHHHHHHHCCCEEEEEEEC----SHHHHHHHHHTTCSEEEECSSC-C--TT--CCHHH---------HT
T ss_pred ----CcHHHHHHHHHHHHhcCCcEEEccCC----CHHHHHHHHHcCcCEEEEecCC-C--cC--CCccc---------cc
Confidence 23456677888888779999996542 3577899999999999984321 1 01 11000 01
Q ss_pred CCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 278 G~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
+. |. | .+..+.++++.... .++|||++|||.+++|+.+++.+||++||+||+|+.
T Consensus 187 g~-g~---p-~~~~i~~v~~~~~~----~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 187 GV-GV---P-QITAIEKCSSVASK----FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CB-CC---C-HHHHHHHHHHHHHH----HTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred CC-CC---C-cHHHHHHHHHHHhh----cCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 11 11 2 23455556554321 179999999999999999999999999999999875
No 48
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.75 E-value=2.1e-16 Score=157.93 Aligned_cols=248 Identities=14% Similarity=0.136 Sum_probs=170.1
Q ss_pred ceEeCCeecCCCceecCCCCC-------CCHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPG-------TNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~-------~~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~ 119 (422)
+.++++++|+|.|+.|++... .+...+....+ ++.|.++++.+...+ .+...| +
T Consensus 7 P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~--~g~~~~---------------~- 68 (358)
T 4a3u_A 7 PIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQ--EGLGWP---------------Y- 68 (358)
T ss_dssp CEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESST--TTCCST---------------T-
T ss_pred CceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECc--cccCCC---------------C-
Confidence 578899999999999985432 13343433333 677999988776643 121111 1
Q ss_pred cccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C--------------------------------------C
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E--------------------------------------Y 160 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~--------------------------------------~ 160 (422)
.++++++.-++.|.+....+++. +..+++||.- | .
T Consensus 69 ----~~gi~~d~~i~~~k~l~~avh~~--G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~m 142 (358)
T 4a3u_A 69 ----APGIWSDAQVEAWLPITQAVHDA--GGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARAL 142 (358)
T ss_dssp ----CCBCSSHHHHHHHHHHHHHHHHT--TCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEEC
T ss_pred ----CcccCchHhHHHHHHHHHHHHhc--CCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccC
Confidence 22444444466666655556553 5677788731 0 0
Q ss_pred C-------HHHHHHHHHHHHHhCCCEEEEcc---------CCCCCCCcc--ccccccccChhHHHHHHHHHhhcc-CccE
Q 014581 161 N-------KAAWEELIDRVEETGIDAIEVNF---------SCPHGMPER--KMGAAVGQDCRLLEEVCGWINAKA-TVPV 221 (422)
Q Consensus 161 ~-------~~~~~~~a~~~~~aGaD~iElN~---------scP~~~~~~--~~G~~l~~~~~~v~~iv~~vr~~~-~iPv 221 (422)
+ .++|.++|++++++|+|+||||. .+|.+ +.| .||++++++.+.+.||+++||+.+ +-+|
T Consensus 143 t~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~t-N~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v 221 (358)
T 4a3u_A 143 RLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDST-NHRHDEYGGAVENRIRLLKDVTERVIATIGKERT 221 (358)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceeccc-CCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccce
Confidence 1 24678899999999999999985 37776 344 599999999999999999999987 4579
Q ss_pred EEEECCCCC--------C---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 222 WAKMTPNIT--------D---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 222 ~vKl~~~~~--------~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
.||++++-. + ...+++.+.+.|++.+.++...... . . ..+.. .+.+
T Consensus 222 ~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~-~-----------~~~~~----~~~a-- 278 (358)
T 4a3u_A 222 AVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDG-----T-F-----------GKTDQ----PKLS-- 278 (358)
T ss_dssp EEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTC-----S-S-----------SBCSS----CCCH--
T ss_pred EEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccC-----c-c-----------ccccc----HHHH--
Confidence 999997521 1 2456778889999999887543210 0 0 00010 1222
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l 354 (422)
.++++.. ..||+ +||+.+++++.++|..| ||+|.+||+++.+ |++++|+.++.
T Consensus 279 --~~ik~~~-------~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~lad-Pdlp~k~~~g~ 332 (358)
T 4a3u_A 279 --PEIRKVF-------KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGN-PDLPRRFFEKA 332 (358)
T ss_dssp --HHHHHHC-------CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHC-TTHHHHHHHTC
T ss_pred --HHHHHhc-------CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhC-hhHHHHHHhCC
Confidence 3455554 45665 67889999999999999 9999999999999 99999998764
No 49
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.71 E-value=4.5e-16 Score=153.66 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=147.3
Q ss_pred CCCCCcceEeC-CeecCCCceecCCCCCCCHHHHHHHHHcCC-cEEEecccccCcccCCCCCCeeEeecCCCCCCCcccc
Q 014581 42 SAEPDLSITVN-GLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119 (422)
Q Consensus 42 ~~~~dL~~~~~-Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~-Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~ 119 (422)
..++.+.|.+. .+.+++||+.|++....+.+....+.++|. |++..+.
T Consensus 10 ~~~~~~~t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~------------------------------ 59 (326)
T 3bo9_A 10 HHHMTVRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGA------------------------------ 59 (326)
T ss_dssp --CCCCCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTT------------------------------
T ss_pred ccceeecchhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCC------------------------------
Confidence 55677888877 477899999999887788898888888874 5442110
Q ss_pred cccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccc
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV 199 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l 199 (422)
. +.+.+.+.++++++.. +.|+.++++. .++ ++.+.++.+.+.|+|+|.++.++|.
T Consensus 60 ---~--------~~~~l~~~i~~i~~~~-~~p~gVnl~~-~~~-~~~~~~~~~~~~g~d~V~l~~g~p~----------- 114 (326)
T 3bo9_A 60 ---M--------KPDDLRKAISELRQKT-DKPFGVNIIL-VSP-WADDLVKVCIEEKVPVVTFGAGNPT----------- 114 (326)
T ss_dssp ---C--------CHHHHHHHHHHHHTTC-SSCEEEEEET-TST-THHHHHHHHHHTTCSEEEEESSCCH-----------
T ss_pred ---C--------CHHHHHHHHHHHHHhc-CCCEEEEEec-cCC-CHHHHHHHHHHCCCCEEEECCCCcH-----------
Confidence 0 0455556677777643 6899999973 222 3556677777889999999987662
Q ss_pred ccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 200 GQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 200 ~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
++++++++. ++|++++++. .+.++.+.+.|+|+|++.+... ||+
T Consensus 115 --------~~~~~l~~~-g~~v~~~v~s-----~~~a~~a~~~GaD~i~v~g~~~----------------------GG~ 158 (326)
T 3bo9_A 115 --------KYIRELKEN-GTKVIPVVAS-----DSLARMVERAGADAVIAEGMES----------------------GGH 158 (326)
T ss_dssp --------HHHHHHHHT-TCEEEEEESS-----HHHHHHHHHTTCSCEEEECTTS----------------------SEE
T ss_pred --------HHHHHHHHc-CCcEEEEcCC-----HHHHHHHHHcCCCEEEEECCCC----------------------Ccc
Confidence 234455543 7899988742 5678889999999999887431 334
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+|. ...++.+.++++.+ ++|||+.|||.+++|+.+++.+||++|++||+++..
T Consensus 159 ~G~---~~~~~ll~~i~~~~-------~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~ 211 (326)
T 3bo9_A 159 IGE---VTTFVLVNKVSRSV-------NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVAS 211 (326)
T ss_dssp CCS---SCHHHHHHHHHHHC-------SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTB
T ss_pred CCC---ccHHHHHHHHHHHc-------CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcC
Confidence 342 23567778887765 799999999999999999999999999999999975
No 50
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.71 E-value=6e-16 Score=153.17 Aligned_cols=187 Identities=21% Similarity=0.243 Sum_probs=138.7
Q ss_pred ecCCCceecCCCCCCCHHHHHHHHHcCC-cEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChH
Q 014581 55 QMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPL 133 (422)
Q Consensus 55 ~l~nPi~~AAg~~~~~~~~~~~~~~~G~-Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~ 133 (422)
.+++|++.+++....+.+.+..+.++|. |++.++.++ .
T Consensus 10 ~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~-----------------------------------------~ 48 (332)
T 2z6i_A 10 KIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAP-----------------------------------------K 48 (332)
T ss_dssp TCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCC-----------------------------------------H
T ss_pred CCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCC-----------------------------------------H
Confidence 3799999998776577888888888874 666432111 3
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
+.+.+.++++++.. +.|+.+++.. .++ ++.+.++.+.++|+|+|+++.+||.. +++++
T Consensus 49 ~~~~~~i~~i~~~~-~~p~gvnl~~-~~~-~~~~~~~~a~~~g~d~V~~~~g~p~~-------------------~i~~l 106 (332)
T 2z6i_A 49 EVVKANIDKIKSLT-DKPFGVNIML-LSP-FVEDIVDLVIEEGVKVVTTGAGNPSK-------------------YMERF 106 (332)
T ss_dssp HHHHHHHHHHHHHC-CSCEEEEECT-TST-THHHHHHHHHHTTCSEEEECSSCGGG-------------------THHHH
T ss_pred HHHHHHHHHHHHhc-CCCEEEEecC-CCC-CHHHHHHHHHHCCCCEEEECCCChHH-------------------HHHHH
Confidence 34444566666543 7899999973 222 36677788888999999999887631 34555
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
++. ++||++|+. ..+.++.+.+.|+|+|++.+.. .||+.|. +..+..++
T Consensus 107 ~~~-g~~v~~~v~-----~~~~a~~~~~~GaD~i~v~g~~----------------------~GG~~g~---~~~~~ll~ 155 (332)
T 2z6i_A 107 HEA-GIIVIPVVP-----SVALAKRMEKIGADAVIAEGME----------------------AGGHIGK---LTTMTLVR 155 (332)
T ss_dssp HHT-TCEEEEEES-----SHHHHHHHHHTTCSCEEEECTT----------------------SSEECCS---SCHHHHHH
T ss_pred HHc-CCeEEEEeC-----CHHHHHHHHHcCCCEEEEECCC----------------------CCCCCCC---ccHHHHHH
Confidence 553 899999974 3567889999999999987541 1233331 23457778
Q ss_pred HHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 294 ~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++++.+ ++|||++|||.+++++.+++.+|||+|++||+++..
T Consensus 156 ~i~~~~-------~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 156 QVATAI-------SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp HHHHHC-------SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred HHHHhc-------CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 888765 799999999999999999999999999999999987
No 51
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.69 E-value=3.2e-15 Score=149.26 Aligned_cols=215 Identities=20% Similarity=0.194 Sum_probs=146.6
Q ss_pred CCCCCCCcceEeC-CeecCCCceecCCCCCCCHHHHHHHHHc-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcc
Q 014581 40 SASAEPDLSITVN-GLQMPNPFVIGSGPPGTNYTVMKRAFDE-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117 (422)
Q Consensus 40 ~~~~~~dL~~~~~-Gl~l~nPi~~AAg~~~~~~~~~~~~~~~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~ 117 (422)
...+++|+++++. .+.++.||+.|++....+.++..++.++ |+|++. ++.
T Consensus 28 ~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~-~~~--------------------------- 79 (366)
T 4fo4_A 28 VLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIH-KNM--------------------------- 79 (366)
T ss_dssp CCGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEEC-SSS---------------------------
T ss_pred CChhhcccceecccccccCCCEEeCCCCCCChHHHHHHHHHcCCceEee-cCC---------------------------
Confidence 3455789999997 7999999999998877788888787775 556442 110
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc
Q 014581 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA 197 (422)
Q Consensus 118 ~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~ 197 (422)
+.+++.+.++++|+.. ..++.+.+. .+ .++.+.++.+.++|+|.|++|.+ +.
T Consensus 80 --------------s~e~~~~~i~~vk~~~-~l~vga~vg--~~-~~~~~~~~~lieaGvd~I~idta--~G-------- 131 (366)
T 4fo4_A 80 --------------SIEQQAAQVHQVKISG-GLRVGAAVG--AA-PGNEERVKALVEAGVDVLLIDSS--HG-------- 131 (366)
T ss_dssp --------------CHHHHHHHHHHHHTTT-SCCCEEECC--SC-TTCHHHHHHHHHTTCSEEEEECS--CT--------
T ss_pred --------------CHHHHHHHHHHHHhcC-ceeEEEEec--cC-hhHHHHHHHHHhCCCCEEEEeCC--CC--------
Confidence 1566777788887642 345666663 22 23456677888899999999853 21
Q ss_pred ccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCcc
Q 014581 198 AVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276 (422)
Q Consensus 198 ~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~ 276 (422)
+++.+.+.++++++.. ++||++.-.. ..+.++.+.++|+|+|.+ +...+. +. -+ +. .
T Consensus 132 ----~~~~~~~~I~~ik~~~p~v~Vi~G~v~----t~e~A~~a~~aGAD~I~v-G~gpGs--~~-~t-r~---------~ 189 (366)
T 4fo4_A 132 ----HSEGVLQRIRETRAAYPHLEIIGGNVA----TAEGARALIEAGVSAVKV-GIGPGS--IC-TT-RI---------V 189 (366)
T ss_dssp ----TSHHHHHHHHHHHHHCTTCEEEEEEEC----SHHHHHHHHHHTCSEEEE-CSSCST--TB-CH-HH---------H
T ss_pred ----CCHHHHHHHHHHHHhcCCCceEeeeeC----CHHHHHHHHHcCCCEEEE-ecCCCC--CC-Cc-cc---------c
Confidence 1244666788888776 7898885322 356789999999999998 211110 00 00 00 0
Q ss_pred CCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 277 gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
.+ .|. | .+..+.++++.... .++|||+.|||.+++|+.+++.+||++|++||+|+.
T Consensus 190 ~g-~g~---p-~~~~l~~v~~~~~~----~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 190 TG-VGV---P-QITAIADAAGVANE----YGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG 245 (366)
T ss_dssp HC-CCC---C-HHHHHHHHHHHHGG----GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cC-ccc---c-hHHHHHHHHHHHhh----cCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhc
Confidence 00 111 2 24556677665432 279999999999999999999999999999999864
No 52
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.69 E-value=1.1e-15 Score=154.85 Aligned_cols=253 Identities=12% Similarity=0.089 Sum_probs=163.9
Q ss_pred ceEeCCeecCCCceecCCCCC---------CC---HHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCC
Q 014581 48 SITVNGLQMPNPFVIGSGPPG---------TN---YTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~---------~~---~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a 115 (422)
+.++++++|+|.|+.|++... .+ .+...+.++.|+|.|+++.+...+. +...
T Consensus 20 P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~--g~~~-------------- 83 (400)
T 4gbu_A 20 PIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQ--AGGY-------------- 83 (400)
T ss_dssp CEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGG--GCCC--------------
T ss_pred CeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECcc--ccCC--------------
Confidence 578899999999999874321 11 2334444456899999988766441 1111
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-C-----------------------------------
Q 014581 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIME-E----------------------------------- 159 (422)
Q Consensus 116 ~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~----------------------------------- 159 (422)
.+ .++++++.-++.|.+....+++. +..+++||.- |
T Consensus 84 -~~-----~~gi~~d~~i~~~k~l~davH~~--G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 155 (400)
T 4gbu_A 84 -DN-----APGVWSEEQMVEWTKIFNAIHEK--KSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKA 155 (400)
T ss_dssp -TT-----SCBSSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHT
T ss_pred -CC-----CCccCCHHHHHHHHHHHHHHHhc--CCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccC
Confidence 11 22444444466666655556553 6788999841 0
Q ss_pred ------CCH-------HHHHHHHHHHHHhCCCEEEEcc---------CCCCCCCcc--ccccccccChhHHHHHHHHHhh
Q 014581 160 ------YNK-------AAWEELIDRVEETGIDAIEVNF---------SCPHGMPER--KMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 160 ------~~~-------~~~~~~a~~~~~aGaD~iElN~---------scP~~~~~~--~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
.+. ++|.++|++++++|+|+||||. .+|.+ |.| .||++++++..++.||+++||+
T Consensus 156 ~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~t-N~RtDeYGGS~ENR~Rf~lEVi~aVr~ 234 (400)
T 4gbu_A 156 NNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHS-NTRTDEYGGSIENRARFTLEVVDALVE 234 (400)
T ss_dssp TCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccccchHHheecCcC-CCCccccCCcHHHHHHHHHHHHHHHHH
Confidence 111 3677889999999999999985 36776 444 5999999999999999999999
Q ss_pred cc-CccEEEEECCCCC----------C----hHHHHHHHHHcC-----CCEEEEecCCcccccccccCCCCCCCCCCCCc
Q 014581 216 KA-TVPVWAKMTPNIT----------D----ITEPARVALRSG-----SEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275 (422)
Q Consensus 216 ~~-~iPv~vKl~~~~~----------~----~~~~a~~l~~aG-----adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~ 275 (422)
++ +-||.||+++.-. . ..++++.+...+ .+.+.+...... .+... ..
T Consensus 235 ~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~----~~ 301 (400)
T 4gbu_A 235 AIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVT---------NPFLT----EG 301 (400)
T ss_dssp HHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCS---------STTSC----TT
T ss_pred HcCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCC---------Ccccc----cc
Confidence 87 4599999997421 1 123444444433 234443322110 00000 01
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh-CCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL-GANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 276 ~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a-GAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
.+.+.+. . .+ .+++.+ ++|||++|||.+..++.+.+.. +||+|.+||+++.+ |++++|+.++.
T Consensus 302 ~~~~~~~----~-~~---~ir~~~-------~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iad-Pdl~~k~~~G~ 365 (400)
T 4gbu_A 302 EGEYEGG----S-ND---FVYSIW-------KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISN-PDLVDRLEKGL 365 (400)
T ss_dssp TTCCCSC----C-ST---HHHHHC-------CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHC-TTHHHHHHHTC
T ss_pred cchhhhH----H-HH---HHHHHh-------CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHC-cHHHHHHHcCC
Confidence 1222111 1 11 245554 7999999999988888777764 69999999999999 99999998763
No 53
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.63 E-value=1.7e-14 Score=142.43 Aligned_cols=192 Identities=19% Similarity=0.165 Sum_probs=136.2
Q ss_pred ecCCCceecCCCCCCCHHHHHHHHHcC-CcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChH
Q 014581 55 QMPNPFVIGSGPPGTNYTVMKRAFDEG-WGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPL 133 (422)
Q Consensus 55 ~l~nPi~~AAg~~~~~~~~~~~~~~~G-~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~ 133 (422)
.++.||+.|++....+.+....+.++| .|++..++. . +.
T Consensus 13 ~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~--------------------------------~--------s~ 52 (328)
T 2gjl_A 13 GVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQ--------------------------------P--------SP 52 (328)
T ss_dssp TCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTS--------------------------------S--------SH
T ss_pred CCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCC--------------------------------C--------CH
Confidence 468999999876667888888888886 355532210 0 03
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCC--HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYN--KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~--~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
+.+.+.++++++.. +.|+.+++..... ..++.+.++.+.+.|+|+|.+++++|. ++++
T Consensus 53 ~~l~~~i~~i~~~~-~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p~-------------------~~~~ 112 (328)
T 2gjl_A 53 EALAAEIARCRELT-DRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPG-------------------EHIA 112 (328)
T ss_dssp HHHHHHHHHHHHHC-SSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCCH-------------------HHHH
T ss_pred HHHHHHHHHHHHhc-CCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCcH-------------------HHHH
Confidence 44455666776654 6789998874200 233566777788889999999976651 3455
Q ss_pred HHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHH
Q 014581 212 WINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~ 291 (422)
++++. ++|+++++. ..+.++.+.+.|+|+|++.+... ||+.|.. .+..++.
T Consensus 113 ~l~~~-gi~vi~~v~-----t~~~a~~~~~~GaD~i~v~g~~~----------------------GG~~G~~-~~~~~~~ 163 (328)
T 2gjl_A 113 EFRRH-GVKVIHKCT-----AVRHALKAERLGVDAVSIDGFEC----------------------AGHPGED-DIPGLVL 163 (328)
T ss_dssp HHHHT-TCEEEEEES-----SHHHHHHHHHTTCSEEEEECTTC----------------------SBCCCSS-CCCHHHH
T ss_pred HHHHc-CCCEEeeCC-----CHHHHHHHHHcCCCEEEEECCCC----------------------CcCCCCc-cccHHHH
Confidence 66655 789987753 24568889999999999875421 2333321 1235667
Q ss_pred HHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++++++.+ ++|||+.|||.+++|+.+++.+||++|++||+++..
T Consensus 164 l~~v~~~~-------~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 164 LPAAANRL-------RVPIIASGGFADGRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp HHHHHTTC-------CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred HHHHHHhc-------CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcC
Confidence 77777654 799999999999999999999999999999999975
No 54
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.60 E-value=7.7e-14 Score=140.50 Aligned_cols=244 Identities=16% Similarity=0.184 Sum_probs=139.6
Q ss_pred CCCCCCcceEeC-CeecCCCceecCCCCCCCHHHHHHHHHc-CCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 41 ASAEPDLSITVN-GLQMPNPFVIGSGPPGTNYTVMKRAFDE-GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 41 ~~~~~dL~~~~~-Gl~l~nPi~~AAg~~~~~~~~~~~~~~~-G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
...++||++++. .+.++.||+-|++-...+.++..++.++ |+|++- +..+.+. +. . .+.+......+ ...+
T Consensus 25 ~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~-~~~~~e~-~~-~---~i~~vk~~~~g-~~~~ 97 (400)
T 3ffs_A 25 LPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIH-KNMDMES-QV-N---EVLKVKNWISN-LEKN 97 (400)
T ss_dssp CGGGCCCCEESSSSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEEC-SSSCHHH-HH-H---HHHHHHCCC-------
T ss_pred CHHHccCccchhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeC-CCCCHHH-HH-H---HHHHHHhhccC-cccC
Confidence 345789999997 6999999998887655778888888887 557554 4433321 00 0 00000000000 0001
Q ss_pred ccc-cccccccCC-ChHHHHHHHHHHHHhhCCC--------CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCC
Q 014581 119 IIG-WENIELISD-RPLETMLKEFKQLKALYPD--------KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPH 188 (422)
Q Consensus 119 ~~G-l~n~~~~s~-~~~e~~l~~i~~~k~~~~~--------~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~ 188 (422)
.++ ..| ++++ .+.++ .+++.+.+. +|. ..+.+.+. ... .+.++.+.++|+|.|.++.+..
T Consensus 98 P~~~~~n--L~~~~~~~~~-~~~~~~~~~-~p~~~~d~~g~l~v~~~v~--~~~---~e~~~~lveaGvdvIvldta~G- 167 (400)
T 3ffs_A 98 ESTPDQN--LDKESTDGKD-TKSNNNIDA-YSNENLDNKGRLRVGAAIG--VNE---IERAKLLVEAGVDVIVLDSAHG- 167 (400)
T ss_dssp ----------------------------C-CTTCCBCTTSSBCCEEEEC--CC----CHHHHHHHHHTCSEEEECCSCC-
T ss_pred CCCcccc--ccCCCCCHHH-HHHHHHhhh-CcchhhccccceeEEeecC--CCH---HHHHHHHHHcCCCEEEEeCCCC-
Confidence 111 011 1100 01111 112222211 221 23455553 222 4567778888999999985422
Q ss_pred CCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCC
Q 014581 189 GMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP 268 (422)
Q Consensus 189 ~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~ 268 (422)
.++.+.++++++++..++||+++... ..+.|+.+.++|+|+|++.++ .+ .+. +.+.
T Consensus 168 -------------~~~~~~e~I~~ik~~~~i~Vi~g~V~----t~e~A~~a~~aGAD~I~vG~g-~G--s~~--~tr~-- 223 (400)
T 3ffs_A 168 -------------HSLNIIRTLKEIKSKMNIDVIVGNVV----TEEATKELIENGADGIKVGIG-PG--SIC--TTRI-- 223 (400)
T ss_dssp -------------SBHHHHHHHHHHHTTCCCEEEEEEEC----SHHHHHHHHHTTCSEEEECC--------------C--
T ss_pred -------------CcccHHHHHHHHHhcCCCeEEEeecC----CHHHHHHHHHcCCCEEEEeCC-CC--cCc--cccc--
Confidence 23456778888888778999986432 367889999999999998432 11 111 1110
Q ss_pred CCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 269 ~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
..+... | .+..+.++++.+.. .++|||++|||.+++|+.+++.+||++||+||+|+.
T Consensus 224 -------~~g~g~----p-~~~al~~v~~~~~~----~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~ 280 (400)
T 3ffs_A 224 -------VAGVGV----P-QITAIEKCSSVASK----FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG 280 (400)
T ss_dssp -------CSCBCC----C-HHHHHHHHHHHHTT----TTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTT
T ss_pred -------ccccch----h-HHHHHHHHHHHHHh----cCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhc
Confidence 011111 2 24567777776532 279999999999999999999999999999999875
No 55
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.57 E-value=2.3e-13 Score=136.50 Aligned_cols=239 Identities=18% Similarity=0.197 Sum_probs=131.9
Q ss_pred ceEeCCeecCCCceecCCCC-CCCHHHHHHHHHcCC-cEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPP-GTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENI 125 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~-~~~~~~~~~~~~~G~-Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~ 125 (422)
+|.+..+ |+.||+.|.+.. ..+.+......++|. |++..+.++.+..+. .+..+......-...|.+... .
T Consensus 2 ~t~~~~~-~~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~-----~i~~~~~~~~~p~gVnl~~~~-~ 74 (369)
T 3bw2_A 2 SSALTDL-FPLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQ-----EIKRLRGLTGRPFGVNVFMPQ-P 74 (369)
T ss_dssp -CTTTTS-SSSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHH-----HHHHHHHHCCSCEEEEEECCC-C
T ss_pred Cchhhhh-CcCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHH-----HHHHHHHhCCCCeEEEEecCC-C
Confidence 3444443 389999987653 478888888888864 766544433211000 000000000000001111100 0
Q ss_pred cccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhH
Q 014581 126 ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRL 205 (422)
Q Consensus 126 ~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~ 205 (422)
........+.|.+.+....+.+ +.++..... . ..+.+.+.++.+.+.|+|+|.++++||..
T Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~-~-~~~~~~~~~~~~~~~g~~~V~~~~g~~~~---------------- 135 (369)
T 3bw2_A 75 ELAESGAVEVYAHQLAGEAAWY-ETELGDPDG-G-RDDGYDAKLAVLLDDPVPVVSFHFGVPDR---------------- 135 (369)
T ss_dssp CC---CHHHHHHHHTHHHHHHT-TCCCCCSCS-C-SSTTHHHHHHHHHHSCCSEEEEESSCCCH----------------
T ss_pred CcccHHHHHHHHHHHHHHHHHc-CCCcCcccc-c-ccccHHHHHHHHHhcCCCEEEEeCCCCcH----------------
Confidence 0011122344444444333333 222211000 0 01124556677777899999999887631
Q ss_pred HHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 206 LEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
++++++++. ++|+++++. + .+.++.+.+.|+|+|++.+...+.. ..+..+ . ..+.-.
T Consensus 136 --~~i~~~~~~-g~~v~~~v~----t-~~~a~~a~~~GaD~i~v~g~~~GGh---~g~~~~----------~--~~~~~~ 192 (369)
T 3bw2_A 136 --EVIARLRRA-GTLTLVTAT----T-PEEARAVEAAGADAVIAQGVEAGGH---QGTHRD----------S--SEDDGA 192 (369)
T ss_dssp --HHHHHHHHT-TCEEEEEES----S-HHHHHHHHHTTCSEEEEECTTCSEE---CCCSSC----------C--GGGTTC
T ss_pred --HHHHHHHHC-CCeEEEECC----C-HHHHHHHHHcCCCEEEEeCCCcCCc---CCCccc----------c--cccccc
Confidence 244555553 789998874 2 4568899999999999977532210 000000 0 000000
Q ss_pred hh-HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 286 PI-ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 286 p~-al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
|. .+..++++++.+ ++|||+.|||.+++++.+++.+|||+|++||+++..
T Consensus 193 ~~~~~~~l~~i~~~~-------~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~ 243 (369)
T 3bw2_A 193 GIGLLSLLAQVREAV-------DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLAT 243 (369)
T ss_dssp CCCHHHHHHHHHHHC-------SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred cccHHHHHHHHHHhc-------CceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 12 256777787765 799999999999999999999999999999999976
No 56
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.55 E-value=1.1e-13 Score=143.92 Aligned_cols=178 Identities=20% Similarity=0.217 Sum_probs=128.3
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
.+.++++. . ++..+.++.+.++|+|.|+||.+||+. +.+.+.++++++.. ++||+++-..
T Consensus 221 ~v~aavG~--~-~d~~~~a~~l~~aG~d~I~id~a~g~~--------------~~~~~~i~~ir~~~p~~~Vi~g~v~-- 281 (496)
T 4fxs_A 221 RVGAAVGA--A-PGNEERVKALVEAGVDVLLIDSSHGHS--------------EGVLQRIRETRAAYPHLEIIGGNVA-- 281 (496)
T ss_dssp CCEEECCS--S-SCCHHHHHHHHHTTCSEEEEECSCTTS--------------HHHHHHHHHHHHHCTTCCEEEEEEC--
T ss_pred eeeeeecc--c-cchHHHHHHHHhccCceEEeccccccc--------------hHHHHHHHHHHHHCCCceEEEcccC--
Confidence 35566642 2 233456677778899999999988763 34667888888877 8899985322
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
..+.++.+.++|+|+|++.++..+ ... + + ...|... | .+..+.++++.+.+ .++|
T Consensus 282 --t~e~a~~l~~aGaD~I~Vg~g~Gs---~~~-t-r---------~~~g~g~----p-~~~~i~~v~~~~~~----~~iP 336 (496)
T 4fxs_A 282 --TAEGARALIEAGVSAVKVGIGPGS---ICT-T-R---------IVTGVGV----P-QITAIADAAGVANE----YGIP 336 (496)
T ss_dssp --SHHHHHHHHHHTCSEEEECSSCCT---TBC-H-H---------HHHCCCC----C-HHHHHHHHHHHHGG----GTCC
T ss_pred --cHHHHHHHHHhCCCEEEECCCCCc---Ccc-c-c---------cccCCCc----c-HHHHHHHHHHHhcc----CCCe
Confidence 257789999999999998654221 000 0 0 0112211 2 34566777776543 2799
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-----------------------------------------------
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMH----------------------------------------------- 342 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~----------------------------------------------- 342 (422)
||++|||.+++|+.+++.+|||+||+||+|...
T Consensus 337 VIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~ 416 (496)
T 4fxs_A 337 VIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVP 416 (496)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCC
T ss_pred EEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccC
Confidence 999999999999999999999999999987531
Q ss_pred ----------hh--HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 343 ----------GY--GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 343 ----------Gp--~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
|+ .++..+..+|+.-|.-.|..+|+|++..
T Consensus 417 eg~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 417 EGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp SBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred CccEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 11 5688899999999999999999999854
No 57
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.54 E-value=1.9e-13 Score=142.89 Aligned_cols=167 Identities=19% Similarity=0.171 Sum_probs=121.8
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcC
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSG 243 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aG 243 (422)
+.+.++.+.++|+|+|++|.+|.+ ++.+.++++++++.+ ++||++|-. ...+.|+.+.++|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~--------------~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aG 317 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGN--------------SVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAG 317 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCC--------------SHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCEEEeeccCCc--------------chhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcC
Confidence 455667788899999999986533 245678889999888 899998733 2367899999999
Q ss_pred CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHH
Q 014581 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323 (422)
Q Consensus 244 adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~ 323 (422)
+|+|.+.+..++ +. +.+. ..+. |.+ .+.++..+.++++.+ ++|||++|||.+++|+.
T Consensus 318 ad~I~vg~~~G~---~~--~t~~---------~~~~-g~~-~~~~~~~~~~~~~~~-------~ipVia~GGI~~~~di~ 374 (514)
T 1jcn_A 318 VDGLRVGMGCGS---IC--ITQE---------VMAC-GRP-QGTAVYKVAEYARRF-------GVPIIADGGIQTVGHVV 374 (514)
T ss_dssp CSEEEECSSCSC---CB--TTBC---------CCSC-CCC-HHHHHHHHHHHHGGG-------TCCEEEESCCCSHHHHH
T ss_pred CCEEEECCCCCc---cc--cccc---------ccCC-Ccc-chhHHHHHHHHHhhC-------CCCEEEECCCCCHHHHH
Confidence 999998432211 10 1010 0111 111 134455566666554 79999999999999999
Q ss_pred HHHHhCCCEEEEhhHHHh------------------------------------------------hh-----------h
Q 014581 324 EFILLGANTVQVCTGVMM------------------------------------------------HG-----------Y 344 (422)
Q Consensus 324 ~~l~aGAd~V~vgtall~------------------------------------------------~G-----------p 344 (422)
+++.+||++|++||+++. +| -
T Consensus 375 kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~g~~~ 454 (514)
T 1jcn_A 375 KALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQ 454 (514)
T ss_dssp HHHHTTCSEEEESTTTTTSTTSSCC--------------------------------------------------CCCHH
T ss_pred HHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccceecccceecCCCcccHH
Confidence 999999999999997754 12 2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 345 GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 345 ~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
.++..+..+|+..|...|+.+++|++..
T Consensus 455 ~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 455 KFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 4677889999999999999999999864
No 58
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.50 E-value=1.9e-13 Score=141.82 Aligned_cols=178 Identities=21% Similarity=0.248 Sum_probs=127.2
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
.+.+.++ .. .+..+.++.+.++|+|.|++|.+|++. ..+.+.++++++.. ++||+++-..
T Consensus 219 ~v~aavG--~~-~~~~~~a~~l~~aG~d~I~id~a~g~~--------------~~~~~~v~~i~~~~p~~~Vi~g~v~-- 279 (490)
T 4avf_A 219 RVGAAVG--TG-ADTGERVAALVAAGVDVVVVDTAHGHS--------------KGVIERVRWVKQTFPDVQVIGGNIA-- 279 (490)
T ss_dssp CCEEEEC--SS-TTHHHHHHHHHHTTCSEEEEECSCCSB--------------HHHHHHHHHHHHHCTTSEEEEEEEC--
T ss_pred eeeeeec--cc-cchHHHHHHHhhcccceEEecccCCcc--------------hhHHHHHHHHHHHCCCceEEEeeeC--
Confidence 3455664 22 234566777878899999999887763 34667888888877 7899986322
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
..+.++.+.++|+|+|.+..+... +.. + + ...|.. ...+..+.++++.+.+ .++|
T Consensus 280 --t~e~a~~l~~aGaD~I~vg~g~Gs---~~~-t-~---------~~~g~g-----~p~~~~l~~v~~~~~~----~~iP 334 (490)
T 4avf_A 280 --TAEAAKALAEAGADAVKVGIGPGS---ICT-T-R---------IVAGVG-----VPQISAIANVAAALEG----TGVP 334 (490)
T ss_dssp --SHHHHHHHHHTTCSEEEECSSCST---TCH-H-H---------HHTCBC-----CCHHHHHHHHHHHHTT----TTCC
T ss_pred --cHHHHHHHHHcCCCEEEECCCCCc---CCC-c-c---------ccCCCC-----ccHHHHHHHHHHHhcc----CCCc
Confidence 256789999999999998543211 000 0 0 011221 1235677788877642 2799
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-------------------h---------------------------
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-------------------G--------------------------- 343 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-------------------G--------------------------- 343 (422)
||++|||.+++|+.+++.+||++||+||+|+.. |
T Consensus 335 VIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~ 414 (490)
T 4avf_A 335 LIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEK 414 (490)
T ss_dssp EEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC------------------------------
T ss_pred EEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccccccc
Confidence 999999999999999999999999999987540 0
Q ss_pred --------------h--HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 344 --------------Y--GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 344 --------------p--~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
+ .++..+..+|+.-|...|..+|+|++..
T Consensus 415 ~~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 415 LVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp ---------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred ccCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 0 4577788888899999999999999865
No 59
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.49 E-value=6.1e-13 Score=124.46 Aligned_cols=126 Identities=19% Similarity=0.280 Sum_probs=96.5
Q ss_pred HHHHHHHHhCCCEEE--EccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE---CCCCCC--hHHHHHHH
Q 014581 167 ELIDRVEETGIDAIE--VNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM---TPNITD--ITEPARVA 239 (422)
Q Consensus 167 ~~a~~~~~aGaD~iE--lN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl---~~~~~~--~~~~a~~l 239 (422)
..++++.+.|+|.|+ +|++|-.. .+.+.+.+.++++++.++ |+++|+ ++++++ +.++++.+
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~~~~-----------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a 141 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSAFKS-----------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEIC 141 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHT-----------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecHHHHhc-----------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHH
Confidence 345667778999999 78887221 234566777889998887 999999 777653 67889999
Q ss_pred HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCH
Q 014581 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG 319 (422)
Q Consensus 240 ~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~ 319 (422)
.++|+|+| .+|+.. ..||. +++.++.+++.+.. ++||+++|||+|+
T Consensus 142 ~eaGad~I-~tstg~--------------------~~gga--------~~~~i~~v~~~v~~-----~ipVia~GGI~t~ 187 (225)
T 1mzh_A 142 IEAGADFI-KTSTGF--------------------APRGT--------TLEEVRLIKSSAKG-----RIKVKASGGIRDL 187 (225)
T ss_dssp HHHTCSEE-ECCCSC--------------------SSSCC--------CHHHHHHHHHHHTT-----SSEEEEESSCCSH
T ss_pred HHhCCCEE-EECCCC--------------------CCCCC--------CHHHHHHHHHHhCC-----CCcEEEECCCCCH
Confidence 99999999 455421 01232 35777888887743 7999999999999
Q ss_pred HHHHHHHHhCCCEEEEhhH
Q 014581 320 GDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 320 ~da~~~l~aGAd~V~vgta 338 (422)
+|+.+++++||+.|+++++
T Consensus 188 ~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 188 ETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHhCchHHHHccH
Confidence 9999999999998888764
No 60
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.49 E-value=3.2e-12 Score=122.42 Aligned_cols=221 Identities=12% Similarity=0.037 Sum_probs=134.4
Q ss_pred ceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIEL 127 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~ 127 (422)
.++++|++|+||+++++|-+..-.+..+.+.++|+-+++++- + +. ++ .+..
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~----p-r~-~~----------------------~g~~- 53 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAV----R-RM-NI----------------------FEAS- 53 (264)
T ss_dssp CEEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEET----T-SS-TT----------------------C----
T ss_pred CeEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcc----c-cc-cc----------------------CCCC-
Confidence 478999999999999988874434556667778888887662 1 11 00 0001
Q ss_pred cCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHH
Q 014581 128 ISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206 (422)
Q Consensus 128 ~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v 206 (422)
.+.+++.++++ ..+++.|....++.++..+.++.+.++ +++.|++++- |... ...+..
T Consensus 54 -----~~~~~~~l~~~-----~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~-~d~~----------~~~~e~ 112 (264)
T 1xm3_A 54 -----QPNFLEQLDLS-----KYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI-GCSR----------SLLPDP 112 (264)
T ss_dssp ---------CTTCCGG-----GSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCB-CCTT----------TCCBCH
T ss_pred -----HHHHHHHHHhc-----CCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeec-CCCc----------ccccch
Confidence 22222222221 356778886447788777777877776 5778888863 2110 001224
Q ss_pred HHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 207 EEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 207 ~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
.++++.+++.. ++.++.-..++ .+.++++.+.|+|+|...+...+ + ..+..+
T Consensus 113 ~~~~~~a~~~~~~g~~vi~~~~~~----~~~a~~~~~~gad~v~~~~~~~G-------t------------~~~~~~--- 166 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLPYTSDD----VVLARKLEELGVHAIMPGASPIG-------S------------GQGILN--- 166 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSC----HHHHHHHHHHTCSCBEECSSSTT-------C------------CCCCSC---
T ss_pred HHHHHHHHHHHCCCeEEEEEcCCC----HHHHHHHHHhCCCEEEECCcccC-------C------------CCCCCC---
Confidence 45555555542 33344323332 35678889999999833222111 0 011211
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELK 355 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~ 355 (422)
.+.++++++.. ++||++.|||.+++|+.+++.+|||+|.|||+++.. .| ..++++.+.++
T Consensus 167 ----~~~l~~i~~~~-------~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 167 ----PLNLSFIIEQA-------KVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVE 228 (264)
T ss_dssp ----HHHHHHHHHHC-------SSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhcC-------CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHH
Confidence 34566676643 799999999999999999999999999999999853 12 34555554443
No 61
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.45 E-value=5.3e-11 Score=122.14 Aligned_cols=144 Identities=20% Similarity=0.187 Sum_probs=99.0
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCC
Q 014581 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNIT 230 (422)
Q Consensus 152 vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~ 230 (422)
+.+.|+ ..++ ..+.++.+.++|+|.|.|+...-| .+.+.+.++++|+.. ++||++- |+.
T Consensus 272 VgAAVg--v~~d-~~eR~~aLv~AGvD~iviD~ahGh--------------s~~v~~~i~~ik~~~p~~~viaG---NVa 331 (556)
T 4af0_A 272 CGAAIG--TRPG-DKDRLKLLAEAGLDVVVLDSSQGN--------------SVYQIEFIKWIKQTYPKIDVIAG---NVV 331 (556)
T ss_dssp CEEEEC--SSHH-HHHHHHHHHHTTCCEEEECCSCCC--------------SHHHHHHHHHHHHHCTTSEEEEE---EEC
T ss_pred eEEEec--cCcc-HHHHHHHHHhcCCcEEEEeccccc--------------cHHHHHHHHHHHhhCCcceEEec---ccc
Confidence 555663 3344 455667788899999999865322 244677888888776 7888874 333
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
..+-++.|.++|||+|.+.=..+. + -+-+. ..|. | .|. +..|.+++++..+ .++||
T Consensus 332 -T~e~a~~Li~aGAD~vkVGiGpGS---i--CtTr~---------v~Gv-G---~PQ-~tAi~~~a~~a~~----~~vpv 387 (556)
T 4af0_A 332 -TREQAAQLIAAGADGLRIGMGSGS---I--CITQE---------VMAV-G---RPQ-GTAVYAVAEFASR----FGIPC 387 (556)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCST---T--BCCTT---------TCCS-C---CCH-HHHHHHHHHHHGG----GTCCE
T ss_pred -CHHHHHHHHHcCCCEEeecCCCCc---c--ccccc---------ccCC-C---CcH-HHHHHHHHHHHHH----cCCCE
Confidence 357889999999999976422111 1 11111 1222 1 143 3467777776543 27999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
|+.|||.+..|+.|+|.+|||+||+|+.|
T Consensus 388 IADGGI~~sGDi~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 388 IADGGIGNIGHIAKALALGASAVMMGGLL 416 (556)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTT
T ss_pred EecCCcCcchHHHHHhhcCCCEEEEchhh
Confidence 99999999999999999999999999866
No 62
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.43 E-value=2e-12 Score=145.89 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=115.5
Q ss_pred cChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 201 QDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 201 ~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
.+++.+.++++++|+.. ++||+||+.++ ..+...|+.+.++|+|+|++.|...+. . ..|... ...+|+
T Consensus 975 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~-~gi~~~A~~a~~AGAD~IvVsG~eGGT-g-----asp~~~----~~~~G~ 1043 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQINPDAKVTVKLVSR-SGIGTIAAGVAKANADIILISGNSGGT-G-----ASPQTS----IKFAGL 1043 (1479)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEEEECC-TTHHHHHHHHHHTTCSEEEEECTTCCC-S-----SEETTH----HHHSCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEcCC-CChHHHHHHHHHcCCcEEEEcCCCCCC-C-----CCchhh----hcCCch
Confidence 34567888999999987 89999999986 356778999999999999998764331 0 011100 011222
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhh----------------
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG---------------- 343 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~G---------------- 343 (422)
|. ...+.++++.+...--..++|||++|||.++.|+.+++++||++|++||+++..-
T Consensus 1044 ------Pt-~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~G 1116 (1479)
T 1ea0_A 1044 ------PW-EMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVG 1116 (1479)
T ss_dssp ------CH-HHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTS
T ss_pred ------hH-HHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCce
Confidence 22 2455666666532100127999999999999999999999999999999998631
Q ss_pred ---------------h----HHHHHHHHHHHHHHHHcCCCCHHHhhcCC
Q 014581 344 ---------------Y----GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373 (422)
Q Consensus 344 ---------------p----~~i~~i~~~l~~~m~~~G~~si~d~~G~~ 373 (422)
+ .+++.+.++|+.+|...|+.+++|++|..
T Consensus 1117 vatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~ 1165 (1479)
T 1ea0_A 1117 VCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRT 1165 (1479)
T ss_dssp SSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCG
T ss_pred eEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCch
Confidence 1 26889999999999999999999998874
No 63
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.43 E-value=3e-12 Score=133.10 Aligned_cols=169 Identities=24% Similarity=0.322 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHH
Q 014581 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALR 241 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~ 241 (422)
.++.+.++++.++|+|++++++. +. .+....++++++++.+ ++||+++-.. ..+.++.+.+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~--~G------------~~~~~~e~i~~i~~~~p~~pvi~g~~~----t~e~a~~l~~ 297 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTA--HG------------HSRRVIETLEMIKADYPDLPVVAGNVA----TPEGTEALIK 297 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCS--CC------------SSHHHHHHHHHHHHHCTTSCEEEEEEC----SHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCEEEEEec--CC------------chHHHHHHHHHHHHHCCCceEEeCCcC----CHHHHHHHHH
Confidence 34667788888999999999864 11 2345667888998887 7999987432 2567799999
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHH
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~d 321 (422)
+|+|+|++.+..++ + .+.+ ...+..+ | ....+.++++.+.+ .++|||++|||.+++|
T Consensus 298 ~G~d~I~v~~~~G~---~--~~~~---------~~~~~g~----p-~~~~l~~v~~~~~~----~~ipvia~GGI~~~~d 354 (494)
T 1vrd_A 298 AGADAVKVGVGPGS---I--CTTR---------VVAGVGV----P-QLTAVMECSEVARK----YDVPIIADGGIRYSGD 354 (494)
T ss_dssp TTCSEEEECSSCST---T--CHHH---------HHHCCCC----C-HHHHHHHHHHHHHT----TTCCEEEESCCCSHHH
T ss_pred cCCCEEEEcCCCCc---c--cccc---------ccCCCCc----c-HHHHHHHHHHHHhh----cCCCEEEECCcCCHHH
Confidence 99999999664321 0 0000 0111211 2 23455566665432 2799999999999999
Q ss_pred HHHHHHhCCCEEEEhhHHHh----------------------------------------------hh-----------h
Q 014581 322 AAEFILLGANTVQVCTGVMM----------------------------------------------HG-----------Y 344 (422)
Q Consensus 322 a~~~l~aGAd~V~vgtall~----------------------------------------------~G-----------p 344 (422)
+.+++++|||+|++||+++. +| .
T Consensus 355 i~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~v~ 434 (494)
T 1vrd_A 355 IVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYKGTVK 434 (494)
T ss_dssp HHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CBCCEECCBCHH
T ss_pred HHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcceEccCcCCCHH
Confidence 99999999999999999962 22 2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 345 GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 345 ~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
.++..+..+|+..|...|+.+++++...
T Consensus 435 ~~~~~l~~~l~~~~~~~G~~~~~~l~~~ 462 (494)
T 1vrd_A 435 DVVHQLVGGLRSGMGYIGARTIKELQEK 462 (494)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHhh
Confidence 5688899999999999999999999854
No 64
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.41 E-value=4.3e-12 Score=132.33 Aligned_cols=167 Identities=20% Similarity=0.193 Sum_probs=120.0
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcC
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSG 243 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aG 243 (422)
..+.++.+.++|+|.|+++..+|+. ..+.+.++++++.. ++||+++-.. ..+.|+.+.++|
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~--------------~~v~~~i~~i~~~~~~~~vi~g~v~----t~e~a~~~~~aG 318 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHS--------------QGVIDKVKEVRAKYPSLNIIAGNVA----TAEATKALIEAG 318 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTS--------------HHHHHHHHHHHHHCTTSEEEEEEEC----SHHHHHHHHHHT
T ss_pred hHHHHHHHHhhccceEEecccccch--------------hhhhhHHHHHHHhCCCceEEeeeec----cHHHHHHHHHhC
Confidence 3455677778899999999877653 34667888888876 5899987432 357899999999
Q ss_pred CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHH
Q 014581 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323 (422)
Q Consensus 244 adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~ 323 (422)
+|+|.+.....+ +... + ...|+..| .+..+.++++.+.+ .++|||++|||.+++|+.
T Consensus 319 ad~i~vg~g~gs---i~~~--~---------~~~g~g~p-----~~~~l~~v~~~~~~----~~iPVIa~GGI~~~~di~ 375 (511)
T 3usb_A 319 ANVVKVGIGPGS---ICTT--R---------VVAGVGVP-----QLTAVYDCATEARK----HGIPVIADGGIKYSGDMV 375 (511)
T ss_dssp CSEEEECSSCST---TCCH--H---------HHHCCCCC-----HHHHHHHHHHHHHT----TTCCEEEESCCCSHHHHH
T ss_pred CCEEEECCCCcc---cccc--c---------cccCCCCC-----cHHHHHHHHHHHHh----CCCcEEEeCCCCCHHHHH
Confidence 999987332111 1000 0 01122211 23556666666542 269999999999999999
Q ss_pred HHHHhCCCEEEEhhHHHh----------------------------------------------hh-----------hHH
Q 014581 324 EFILLGANTVQVCTGVMM----------------------------------------------HG-----------YGL 346 (422)
Q Consensus 324 ~~l~aGAd~V~vgtall~----------------------------------------------~G-----------p~~ 346 (422)
+++++||++|++||+|+. +| ..+
T Consensus 376 kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~~~~~~~~~~~~~ 455 (511)
T 3usb_A 376 KALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEGRVPYKGPLADT 455 (511)
T ss_dssp HHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC----------------------------------CBCCBCHHHH
T ss_pred HHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcEEeCCCCCCHHHH
Confidence 999999999999998732 00 145
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 347 VKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 347 i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
+..+..+|+.-|...|..+++|++..
T Consensus 456 ~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 456 VHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp HHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 77888999999999999999999753
No 65
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.41 E-value=2.7e-12 Score=145.14 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=113.2
Q ss_pred cChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 201 QDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 201 ~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
.+++.+.++++++|+.. ++||+||+.++ ..+...|+.+.++|+|+|++.|...+. . ..|... ...+|+
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~-~gi~~~A~~a~kAGAD~IvVsG~eGGT-g-----asp~~~----~~~~Gl 1078 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAE-IGIGTIAAGVAKANADIIQISGHDGGT-G-----ASPLSS----IKHAGS 1078 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECS-TTHHHHHHHHHHTTCSEEEEECTTCCC-S-----SEEHHH----HHHBCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCC-CChHHHHHHHHHcCCCEEEEeCCCCcc-C-----CCcchh----hcCCch
Confidence 34567888999999988 89999999986 356778899999999999998764321 0 001000 001222
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhh----------------
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG---------------- 343 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~G---------------- 343 (422)
|. ...+.++++.+...--..++|||++|||.++.|+.+++++||++|++||+++..-
T Consensus 1079 ------Pt-~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~G 1151 (1520)
T 1ofd_A 1079 ------PW-ELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVG 1151 (1520)
T ss_dssp ------CH-HHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTS
T ss_pred ------hH-HHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCce
Confidence 22 2445566665421000016999999999999999999999999999999997631
Q ss_pred ---------------h----HHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 344 ---------------Y----GLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 344 ---------------p----~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
+ .++..+.++|+.+|...|+.+++|++|.
T Consensus 1152 vatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr 1199 (1520)
T 1ofd_A 1152 VATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGR 1199 (1520)
T ss_dssp SSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTC
T ss_pred eEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 1 2688999999999999999999999865
No 66
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.37 E-value=5e-10 Score=104.97 Aligned_cols=222 Identities=14% Similarity=0.151 Sum_probs=143.2
Q ss_pred ceEeCCeecCCCceecCCCCCCCHHHHHHHHH-cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccccccccc
Q 014581 48 SITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIE 126 (422)
Q Consensus 48 ~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~-~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~ 126 (422)
..++.|.+|.+.++++.|-. .+.+.+.+..+ +|.-.+++ ..+ +. +.. ++.+
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky-~~~~~~~~a~~asg~e~vtv---a~r--R~-~~~---------------------~~~~ 61 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKY-KDLDETRRAIEASGAEIVTV---AVR--RT-NIG---------------------QNPD 61 (265)
T ss_dssp CEEETTEEESCCEEECCSCS-SSHHHHHHHHHHSCCSEEEE---EGG--GC-CC--------------------------
T ss_pred CeEECCEEeecceEEecCCC-CCHHHHHHHHHHhCCCeEEE---EEE--ee-ccc---------------------cCCC
Confidence 48999999999999999988 56766666655 68886643 221 11 100 0000
Q ss_pred ccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHH-h-CCCEEEEccCCCCCCCccccccccccChh
Q 014581 127 LISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEE-T-GIDAIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 127 ~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~-a-GaD~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
.+.+++.|+ + .+..+..|-.++.+.++.+..|+...+ + |-+.|-|-+..-+. .+..|+.
T Consensus 62 ------~~~~~~~i~---~--~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~--------~llpD~~ 122 (265)
T 1wv2_A 62 ------EPNLLDVIP---P--DRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQK--------TLFPNVV 122 (265)
T ss_dssp --------------C---T--TTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTT--------TCCBCHH
T ss_pred ------cchHHhhhh---h--cCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcc--------ccCcCHH
Confidence 112222221 1 146788999888899999999998888 5 68899988742221 1234555
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
.+.+..+.+.+. .+.++.-+.++ ...++++.++|++.|...+...+ +.-|++
T Consensus 123 ~tv~aa~~L~~~-Gf~Vlpy~~dd----~~~akrl~~~G~~aVmPlg~pIG-------------------sG~Gi~---- 174 (265)
T 1wv2_A 123 ETLKAAEQLVKD-GFDVMVYTSDD----PIIARQLAEIGCIAVMPLAGLIG-------------------SGLGIC---- 174 (265)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECSC----HHHHHHHHHSCCSEEEECSSSTT-------------------CCCCCS----
T ss_pred HHHHHHHHHHHC-CCEEEEEeCCC----HHHHHHHHHhCCCEEEeCCccCC-------------------CCCCcC----
Confidence 555555555443 45555334433 67899999999999955443111 001221
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh--hhhHHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM--HGYGLVKRLCEEL 354 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~--~Gp~~i~~i~~~l 354 (422)
..+.|+++++.. ++|||+.|||.+++|+.+++++|||+|+++|++.. +...+.+.+.+.+
T Consensus 175 ---~~~lI~~I~e~~-------~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 175 ---NPYNLRIILEEA-------KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAI 236 (265)
T ss_dssp ---CHHHHHHHHHHC-------SSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHhcC-------CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 246677777754 89999999999999999999999999999999986 2223444555444
No 67
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.35 E-value=9.3e-12 Score=117.64 Aligned_cols=186 Identities=17% Similarity=0.115 Sum_probs=119.6
Q ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEc--cCCCCCCCccc---c--ccccccChhHHHHHHHHHhhccCcc
Q 014581 149 DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVN--FSCPHGMPERK---M--GAAVGQDCRLLEEVCGWINAKATVP 220 (422)
Q Consensus 149 ~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN--~scP~~~~~~~---~--G~~l~~~~~~v~~iv~~vr~~~~iP 220 (422)
..++++|+..+. +.+.+.+.++.+++. +|.||++ +|+|..+.... . +..-+.+.....++++.+|+.+++|
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~p 82 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTP 82 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCC
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCC
Confidence 357899997543 347899999999998 9999999 56776431100 0 0001125556678899999888899
Q ss_pred EEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCcc----------------cccccccCC----CCCC-CCCCC---
Q 014581 221 VWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMS----------------VMGIDLKTL----RPEP-CVEGY--- 273 (422)
Q Consensus 221 v~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~----------------~~~id~e~~----~p~~-~~~~~--- 273 (422)
|.+....+. ....+.++.+.++|+|+|++.+.... ...++..+. +... ...++
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~ 162 (248)
T 1geq_A 83 IVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYL 162 (248)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEE
T ss_pred EEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEE
Confidence 988752110 11267889999999999998752210 011121110 0000 00000
Q ss_pred CccCCCCCCC--cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 274 STPGGYSCKA--VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 274 ~~~gG~sG~~--i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
....|..|.. ..|..++.++++++.. ++||++.|||++++++.+++.+|||+|.+||+++..
T Consensus 163 ~~~~G~~g~~~~~~~~~~~~i~~l~~~~-------~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 163 VSLYGTTGAREEIPKTAYDLLRRAKRIC-------RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp ECCC-------CCCHHHHHHHHHHHHHC-------SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred EECCccCCCCCCCChhHHHHHHHHHhhc-------CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 0112222321 3356678888888865 799999999999999999999999999999999865
No 68
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.34 E-value=4.7e-11 Score=114.50 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=121.0
Q ss_pred HHHHHhhCCCCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccc----------ccChhHHHH
Q 014581 140 FKQLKALYPDKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV----------GQDCRLLEE 208 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l----------~~~~~~v~~ 208 (422)
+++++++ ....++.+|..+ .+.+.+.+.++.++++|+|+||+++ |.+++..+ |..+ +-+.+..-+
T Consensus 8 f~~~~~~-~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~sdp~~D-G~~i~~a~~~al~~G~~~~~~~~ 83 (268)
T 1qop_A 8 FAQLNDR-REGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV--PFSDPLAD-GPTIQNANLRAFAAGVTPAQCFE 83 (268)
T ss_dssp HHHHHHT-TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCSCCTTC-CHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHhc-CCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCCccCC-CHHHHHHHHHHHHcCCCHHHHHH
Confidence 4444443 245688888654 3568999999999999999999986 33322111 1111 113344557
Q ss_pred HHHHHhhc-cCccEEE--EECC-CCCChHHHHHHHHHcCCCEEEEecCCccc----------cccc-ccCCCCCCC----
Q 014581 209 VCGWINAK-ATVPVWA--KMTP-NITDITEPARVALRSGSEGVSAINTIMSV----------MGID-LKTLRPEPC---- 269 (422)
Q Consensus 209 iv~~vr~~-~~iPv~v--Kl~~-~~~~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id-~e~~~p~~~---- 269 (422)
+++++|+. +++|+++ +..| ......++++.+.++|+|++++..-.... .+++ +.-..|...
T Consensus 84 ~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i 163 (268)
T 1qop_A 84 MLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLL 163 (268)
T ss_dssp HHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHH
T ss_pred HHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHH
Confidence 88999988 7999876 2222 11234788999999999999887533110 0000 000001000
Q ss_pred ------CCCCC---ccCCCCCC--CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhH
Q 014581 270 ------VEGYS---TPGGYSCK--AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 270 ------~~~~~---~~gG~sG~--~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgta 338 (422)
..++. +.-|+.|. ...+...+.|+++++.. ++||+..|||.+++++.+++.+|||+|.+||+
T Consensus 164 ~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-------~~pi~vggGI~t~e~~~~~~~agAD~vVVGSa 236 (268)
T 1qop_A 164 RQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH-------AAPALQGFGISSPEQVSAAVRAGAAGAISGSA 236 (268)
T ss_dssp HHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT-------CCCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc-------CCcEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 00010 11244453 22344467888888765 79999999999999999999999999999999
Q ss_pred HHhh
Q 014581 339 VMMH 342 (422)
Q Consensus 339 ll~~ 342 (422)
++..
T Consensus 237 i~~~ 240 (268)
T 1qop_A 237 IVKI 240 (268)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 9864
No 69
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.34 E-value=6.2e-11 Score=111.40 Aligned_cols=171 Identities=11% Similarity=0.050 Sum_probs=117.2
Q ss_pred HHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc
Q 014581 137 LKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216 (422)
Q Consensus 137 l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~ 216 (422)
.+.++++++.. +.|++++-+ -.+++++ +.+.++|+|++.++.. +..+++.+.++.+.....
T Consensus 66 ~~~i~~i~~~~-~ipvi~~g~-i~~~~~~----~~~~~~Gad~V~i~~~-------------~~~~~~~~~~~~~~~g~~ 126 (253)
T 1h5y_A 66 IDSVKRVAEAV-SIPVLVGGG-VRSLEDA----TTLFRAGADKVSVNTA-------------AVRNPQLVALLAREFGSQ 126 (253)
T ss_dssp HHHHHHHHHHC-SSCEEEESS-CCSHHHH----HHHHHHTCSEEEESHH-------------HHHCTHHHHHHHHHHCGG
T ss_pred HHHHHHHHHhc-CCCEEEECC-CCCHHHH----HHHHHcCCCEEEEChH-------------HhhCcHHHHHHHHHcCCC
Confidence 44566677665 789998775 3455543 4444579999998831 124566666666654211
Q ss_pred -----cCc-----cEEEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 217 -----ATV-----PVWAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 217 -----~~i-----Pv~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
.+. ++.|++.... .+..+.++.+.+.|+|.|.+++.... +...|+
T Consensus 127 ~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~---------------------g~~~~~ 185 (253)
T 1h5y_A 127 STVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRD---------------------GTGLGY 185 (253)
T ss_dssp GEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTT---------------------TTCSCC
T ss_pred cEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCC---------------------CCcCcC
Confidence 122 1466665432 24578899999999999988864321 111111
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcC
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G 362 (422)
.++.++++++.+ ++||+++|||.+++|+.+++.+||++|++||+++..+.. .+++.+||+++|
T Consensus 186 -----~~~~i~~l~~~~-------~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~-----~~~~~~~l~~~g 248 (253)
T 1h5y_A 186 -----DVELIRRVADSV-------RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS-----IAQVKRYLKERG 248 (253)
T ss_dssp -----CHHHHHHHHHHC-------SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC-----HHHHHHHHHHTT
T ss_pred -----CHHHHHHHHHhc-------CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC-----HHHHHHHHHHcC
Confidence 256677787764 799999999999999999999999999999999876422 356677889999
Q ss_pred CC
Q 014581 363 FS 364 (422)
Q Consensus 363 ~~ 364 (422)
|.
T Consensus 249 ~~ 250 (253)
T 1h5y_A 249 VE 250 (253)
T ss_dssp CB
T ss_pred CC
Confidence 85
No 70
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.32 E-value=5.6e-12 Score=123.15 Aligned_cols=204 Identities=23% Similarity=0.263 Sum_probs=124.2
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEE-EEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAI-EVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~i-ElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
..++|.++. + .+.++.++++|+|+| +++ .+|.. .....|.....+++.++++ ++.+++|+++|+..
T Consensus 21 ~~g~i~~~~----~---~~~a~~~~~~Ga~~I~~l~-p~~~~-~~~~~G~~~~~~~~~i~~I----~~~~~iPv~~k~r~ 87 (305)
T 2nv1_A 21 KGGVIMDVI----N---AEQAKIAEEAGAVAVMALE-RVPAD-IRAAGGVARMADPTIVEEV----MNAVSIPVMAKARI 87 (305)
T ss_dssp TTCEEEEES----S---HHHHHHHHHTTCSEEEECC-C--------CCCCCCCCCHHHHHHH----HHHCSSCEEEEECT
T ss_pred cCCeeecCC----H---HHHHHHHHHcCCCEEEEcC-CCcch-hhhccCcccCCCHHHHHHH----HHhCCCCEEecccc
Confidence 346776663 2 356788888999999 565 22322 1112233345566666655 44468999999876
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCC-----CCC-C-------------CCC---CccC--------
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRP-----EPC-V-------------EGY---STPG-------- 277 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p-----~~~-~-------------~~~---~~~g-------- 277 (422)
.. .+.++.+.++|+|+|+....... -++...-. .+. . .|- ...|
T Consensus 88 g~---~~~~~~~~a~GAd~V~~~~~l~~---~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~ 161 (305)
T 2nv1_A 88 GH---IVEARVLEAMGVDYIDESEVLTP---ADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIV 161 (305)
T ss_dssp TC---HHHHHHHHHHTCSEEEECTTSCC---SCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTH
T ss_pred cc---hHHHHHHHHCCCCEEEEeccCCH---HHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchH
Confidence 43 45677888899999973322110 01100000 000 0 000 0000
Q ss_pred -----------------CCCCCCc------chhHHHHHHHHHHHhhccCCCCCceEE--EecCCCCHHHHHHHHHhCCCE
Q 014581 278 -----------------GYSCKAV------HPIALGKVMSIAKMMKSEFNDKDYSLS--GIGGVETGGDAAEFILLGANT 332 (422)
Q Consensus 278 -----------------G~sG~~i------~p~al~~v~~i~~~~~~~~~~~~ipII--a~GGI~s~~da~~~l~aGAd~ 332 (422)
|+++..+ .+..++.++++++.. ++||+ ++|||.+++|+.+++.+||++
T Consensus 162 ~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~-------~iPvi~~a~GGI~~~~d~~~~~~~Gadg 234 (305)
T 2nv1_A 162 EAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG-------KLPVVNFAAGGVATPADAALMMQLGADG 234 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT-------SCSSCEEBCSCCCSHHHHHHHHHTTCSC
T ss_pred HHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc-------CCCEEEEeccCCCCHHHHHHHHHcCCCE
Confidence 0111111 133456777777654 78888 999999999999999999999
Q ss_pred EEEhhHHHhhh-h-HHHHHHHHHHHHHHHHcCCCCHHHhhcCCcccCC
Q 014581 333 VQVCTGVMMHG-Y-GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 333 V~vgtall~~G-p-~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~~~~ 378 (422)
|++||+++..+ | ..++++.+.+.+|++.+++.++++++|.+.+.+.
T Consensus 235 V~vGsai~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 282 (305)
T 2nv1_A 235 VFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIE 282 (305)
T ss_dssp EEECGGGGGSSCHHHHHHHHHHHHHTTTCHHHHHHHTSCC--------
T ss_pred EEEcHHHHcCCCHHHHHHHHHHHHHHhcChhhHHHHHHHhhhhhcCCC
Confidence 99999999742 4 4789999999999999999999999988776654
No 71
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.31 E-value=2.3e-11 Score=143.22 Aligned_cols=215 Identities=12% Similarity=0.152 Sum_probs=145.2
Q ss_pred CCCCcceEeCCeecCCCceecCCC-CCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccc
Q 014581 43 AEPDLSITVNGLQMPNPFVIGSGP-PGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG 121 (422)
Q Consensus 43 ~~~dL~~~~~Gl~l~nPi~~AAg~-~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~G 121 (422)
.+++++|+|..+.-+.||+.|++. .+.+.+++.+..++|.-+++.+. ++
T Consensus 568 ~~~~l~t~~t~~lg~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~--------g~---------------------- 617 (2060)
T 2uva_G 568 GQTFVDTKMSRLLGVPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGG--------GY---------------------- 617 (2060)
T ss_dssp CCEEEECHHHHHHTSCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGG--------GC----------------------
T ss_pred CceecchhhhhccccceEEecCCCCccccHHHHHHHHHCCCEEEECcC--------CC----------------------
Confidence 345677777654338999999887 45688988888888654333221 00
Q ss_pred cccccccCCChHHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHH---HHHHHHHHHHhCCCE--EEEccCCCCCCCcccc
Q 014581 122 WENIELISDRPLETMLKEFKQLKALY-PDKILIASIMEEYNKAA---WEELIDRVEETGIDA--IEVNFSCPHGMPERKM 195 (422)
Q Consensus 122 l~n~~~~s~~~~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~---~~~~a~~~~~aGaD~--iElN~scP~~~~~~~~ 195 (422)
. +.+.+.++|+++|+.. |+.|+++|++. .++.. +.+..+.+.+.|++. |.+..+.|.
T Consensus 618 -~--------~~e~l~~~i~~vk~~~~~~~p~gvN~~~-~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~------- 680 (2060)
T 2uva_G 618 -Y--------NAQKMSDAISKIEKAIPPGRGITVNLIY-VNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS------- 680 (2060)
T ss_dssp -C--------SHHHHHHHHHHHGGGSCTTCCEEEEEET-TCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC-------
T ss_pred -C--------CHHHHHHHHHHHHhhcccCCCeEecccc-cCcccchhHHHHHHHHHHcCCCcceEeecCCCCC-------
Confidence 0 1466667788888754 36899999973 33332 346777777889998 888765543
Q ss_pred ccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCc
Q 014581 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275 (422)
Q Consensus 196 G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~ 275 (422)
.+++++.+++. +++++. +.+...+..+.+.++.++|+|+|++.+-.+. .
T Consensus 681 ----------~e~~~~~l~~~-gi~~i~-~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~-------------------e 729 (2060)
T 2uva_G 681 ----------IEVANEYIQTL-GIRHIS-FKPGSVDAIQQVINIAKANPTFPIILQWTGG-------------------R 729 (2060)
T ss_dssp ----------HHHHHHHHHHS-CCSEEE-ECCCSHHHHHHHHHHHHHCTTSCEEEEECCT-------------------T
T ss_pred ----------HHHHHHHHHHc-CCeEEE-ecCCHHHHHHHHHHHHHcCCCEEEEeeeEcc-------------------c
Confidence 12233444443 788874 3444444445556678999999985542211 1
Q ss_pred cCCCCC-CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHH-----------HhCCCEEEEhhHHHhh
Q 014581 276 PGGYSC-KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFI-----------LLGANTVQVCTGVMMH 342 (422)
Q Consensus 276 ~gG~sG-~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l-----------~aGAd~V~vgtall~~ 342 (422)
.||+.| ..+....+..+.++++.+ ++|||+.|||.+++|+.++| ++|||+|||||.++.-
T Consensus 730 aGGH~g~~d~~~~~l~lv~~i~~~~-------~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t 801 (2060)
T 2uva_G 730 GGGHHSFEDFHQPILLMYSRIRKCS-------NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTA 801 (2060)
T ss_dssp SSSSCCSCCSHHHHHHHHHHHHTST-------TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGB
T ss_pred CCCCCCcccccchHHHHHHHHHHHc-------CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcC
Confidence 355544 222334567777777765 79999999999999999999 9999999999999973
No 72
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.30 E-value=4.4e-12 Score=123.34 Aligned_cols=206 Identities=17% Similarity=0.141 Sum_probs=131.0
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
..|+|+++.. .++++.++++|+++|+++-+.|.. .....|......++. ++.+++.+++|++++....
T Consensus 21 ~~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v~~~-~~~~~G~~~~~~~~~----i~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT-------PEQAVIAEEAGAVAVMALERVPAD-IRAQGGVARMSDPKI----IKEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS-------HHHHHHHHHHTCSEEEECSSCHHH-HHHTTCCCCCCCHHH----HHHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech-------HHHHHHHHHCCCcEEEeccccchH-HHhhcCCccCCCHHH----HHHHHHhcCCCeEEEeccC
Confidence 4589999952 467788888999999996443321 001112223344443 4556667799999987664
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCC---CCCCC---------------CCC---ccC----------
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRP---EPCVE---------------GYS---TPG---------- 277 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p---~~~~~---------------~~~---~~g---------- 277 (422)
. .+.++.+.++|+|+|..+..... ..+ ++..+. ...+. |.. ..|
T Consensus 89 ~---~~~~~~~~~aGad~v~~~~~~~~-~~~-~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~ 163 (297)
T 2zbt_A 89 H---FVEAMILEAIGVDFIDESEVLTP-ADE-EHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEA 163 (297)
T ss_dssp C---HHHHHHHHHTTCSEEEEETTSCC-SCS-SCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHH
T ss_pred C---HHHHHHHHHCCCCEEeeeCCCCh-HHH-HHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHH
Confidence 2 67788899999999944321100 000 000000 00000 000 000
Q ss_pred ---------------CCCCCC------cchhHHHHHHHHHHHhhccCCCCCceEE--EecCCCCHHHHHHHHHhCCCEEE
Q 014581 278 ---------------GYSCKA------VHPIALGKVMSIAKMMKSEFNDKDYSLS--GIGGVETGGDAAEFILLGANTVQ 334 (422)
Q Consensus 278 ---------------G~sG~~------i~p~al~~v~~i~~~~~~~~~~~~ipII--a~GGI~s~~da~~~l~aGAd~V~ 334 (422)
|+.+.. ..+..++.++++++.. ++||+ +.|||.+++|+.+++.+|||+|+
T Consensus 164 ~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-------~~pvi~~a~GGI~~~e~i~~~~~aGadgvv 236 (297)
T 2zbt_A 164 VRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-------RLPVVNFAAGGIATPADAALMMHLGMDGVF 236 (297)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-------SCSSCEEBCSSCCSHHHHHHHHHTTCSEEE
T ss_pred HhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-------CCCcEEEeeCCCCCHHHHHHHHHcCCCEEE
Confidence 111110 0123456677777654 68888 99999999999999999999999
Q ss_pred EhhHHHhh-hh-HHHHHHHHHHHHHHHHcCCCCHHHhhcCCcccCC
Q 014581 335 VCTGVMMH-GY-GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 335 vgtall~~-Gp-~~i~~i~~~l~~~m~~~G~~si~d~~G~~~~~~~ 378 (422)
+||+++.. .| ..++++.+.+.+|++.+++.+++|++|.+++.+.
T Consensus 237 vGsai~~~~dp~~~~~~l~~~i~~~~~~~~~~~~~~~~g~~~~~~~ 282 (297)
T 2zbt_A 237 VGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEVSEDLGEPMVGIN 282 (297)
T ss_dssp ECGGGGGSSCHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCCC----
T ss_pred EchHHhCCCCHHHHHHHHHHHHHHHhchHhhhHHHHhcCceeEEee
Confidence 99999953 24 5788999999999999999999999998866544
No 73
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.30 E-value=1.7e-10 Score=110.35 Aligned_cols=195 Identities=17% Similarity=0.146 Sum_probs=120.8
Q ss_pred HHHHHHhhCCCCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEcc--CCCCCCCc--ccc-ccc--cccChhHHHHHH
Q 014581 139 EFKQLKALYPDKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNF--SCPHGMPE--RKM-GAA--VGQDCRLLEEVC 210 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~--scP~~~~~--~~~-G~~--l~~~~~~v~~iv 210 (422)
.+++++++- ...++..+..| .+.+.+.+.++.++++|+|.|||++ |-|..+.. +.. -.+ -+-+.+.+-+++
T Consensus 8 ~f~~~~~~~-~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v 86 (267)
T 3vnd_A 8 KFAALKAQD-KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDII 86 (267)
T ss_dssp HHHHHHHHT-CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhcC-CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 455555542 56788898754 4679999999999999999999995 33433210 000 001 123445667888
Q ss_pred HHHhhc-cCccEEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCccc----------cccc------ccC----CCC
Q 014581 211 GWINAK-ATVPVWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMSV----------MGID------LKT----LRP 266 (422)
Q Consensus 211 ~~vr~~-~~iPv~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id------~e~----~~p 266 (422)
+.+|+. +++|+++-.-.|. ....++++.+.++|+|++++..-.... .+++ +.+ .+.
T Consensus 87 ~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~ 166 (267)
T 3vnd_A 87 TKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKM 166 (267)
T ss_dssp HHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHH
T ss_pred HHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHH
Confidence 888887 7899887532110 134788999999999998776422110 0111 000 000
Q ss_pred CC-CCCCC---CccCCCCCCC--cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 267 EP-CVEGY---STPGGYSCKA--VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 267 ~~-~~~~~---~~~gG~sG~~--i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
.. ...++ .+.-|..|.. +.+...+.++++++.. ++||+..|||++++++.+.+.+|||+|.+||+++
T Consensus 167 i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-------~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 167 VSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-------APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT-------CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-------CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 00 00111 1122333321 2233456777777654 7999999999999999999999999999999997
Q ss_pred h
Q 014581 341 M 341 (422)
Q Consensus 341 ~ 341 (422)
.
T Consensus 240 ~ 240 (267)
T 3vnd_A 240 K 240 (267)
T ss_dssp H
T ss_pred H
Confidence 5
No 74
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.28 E-value=1.6e-10 Score=110.73 Aligned_cols=192 Identities=17% Similarity=0.179 Sum_probs=120.2
Q ss_pred HHHHHHhhCCCCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc--------cc--ccChhHHH
Q 014581 139 EFKQLKALYPDKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA--------AV--GQDCRLLE 207 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~--------~l--~~~~~~v~ 207 (422)
.+++++++- ...++.-+..| .+.+.+.++++.++++|+|.|||++ |.+++..+ |. ++ +-+.+.+-
T Consensus 10 ~f~~~~~~~-~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGi--PfSDP~aD-GpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 10 LFQRLSAAQ-QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGM--PFSDPLAD-GPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHTT-BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCCCGGGC-CSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHhcC-CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCC-CHHHHHHHHHHHHcCCCHHHHH
Confidence 345555432 45688888644 4789999999999999999999996 44433222 11 11 12445666
Q ss_pred HHHHHHhhc-cCccEEEEECCC--C-CChHHHHHHHHHcCCCEEEEecCCccc----------cccccc-CCCCCCC---
Q 014581 208 EVCGWINAK-ATVPVWAKMTPN--I-TDITEPARVALRSGSEGVSAINTIMSV----------MGIDLK-TLRPEPC--- 269 (422)
Q Consensus 208 ~iv~~vr~~-~~iPv~vKl~~~--~-~~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id~e-~~~p~~~--- 269 (422)
++++.+|+. .++|+++-.-.| + ....++++.+.++|+|++++..-.... .+++.- -..|...
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~er 165 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDET 165 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHH
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHH
Confidence 788888876 789998854211 1 246789999999999998775422110 111100 0000000
Q ss_pred -------CCCC---CccCCCCCCC--cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 270 -------VEGY---STPGGYSCKA--VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 270 -------~~~~---~~~gG~sG~~--i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
..++ ...-|+.|.. +.+...+.++++++.. ++||+..+||++++++.+.+.+|||+|.|||
T Consensus 166 i~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-------~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 166 LRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD-------APPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT-------CCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc-------CCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 0111 1122333422 2233346677777764 7999999999999999999999999999999
Q ss_pred HHHh
Q 014581 338 GVMM 341 (422)
Q Consensus 338 all~ 341 (422)
+++.
T Consensus 239 Aiv~ 242 (271)
T 3nav_A 239 AVVK 242 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
No 75
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.28 E-value=1.1e-10 Score=109.38 Aligned_cols=163 Identities=13% Similarity=0.105 Sum_probs=106.3
Q ss_pred HHHHHHhhCCCCeEEEEeCCCC-----CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 139 EFKQLKALYPDKILIASIMEEY-----NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~-----~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
.|+++|+.. +.|++.-+...+ -...+.+-++.+.++|+|.|-++..+- .+|+.+.++++.+
T Consensus 60 ~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~-------------~~p~~l~~~i~~~ 125 (229)
T 3q58_A 60 NLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFR-------------SRPVDIDSLLTRI 125 (229)
T ss_dssp HHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSS-------------CCSSCHHHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECcccc-------------CChHHHHHHHHHH
Confidence 466777765 889886443211 000112234556678999999886431 2334577888888
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
++. +.++++.+. ..+.++.+.++|+|.|.+.++... + +... ....++.++
T Consensus 126 ~~~-g~~v~~~v~-----t~eea~~a~~~Gad~Ig~~~~g~t-------~-------------~~~~----~~~~~~li~ 175 (229)
T 3q58_A 126 RLH-GLLAMADCS-----TVNEGISCHQKGIEFIGTTLSGYT-------G-------------PITP----VEPDLAMVT 175 (229)
T ss_dssp HHT-TCEEEEECS-----SHHHHHHHHHTTCSEEECTTTTSS-------S-------------SCCC----SSCCHHHHH
T ss_pred HHC-CCEEEEecC-----CHHHHHHHHhCCCCEEEecCccCC-------C-------------CCcC----CCCCHHHHH
Confidence 765 788887643 356788999999999964332211 0 0000 011346666
Q ss_pred HHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 294 ~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
++++. ++|||+.|||.+++|+.+++.+||++|+||++++.- ..+.+++.+.+
T Consensus 176 ~l~~~--------~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p-~~~~~~f~~~~ 227 (229)
T 3q58_A 176 QLSHA--------GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRI-EHICQWFSHAV 227 (229)
T ss_dssp HHHTT--------TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCH-HHHHHHHHHHH
T ss_pred HHHHc--------CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcCh-HHHHHHHHHHH
Confidence 66542 699999999999999999999999999999999852 34455555443
No 76
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.28 E-value=1.5e-10 Score=108.74 Aligned_cols=164 Identities=17% Similarity=0.167 Sum_probs=106.8
Q ss_pred HHHHHHhhCCCCeEEEEeCCCC-----CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 139 EFKQLKALYPDKILIASIMEEY-----NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~-----~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
.|+++|+.. +.|++..+...+ -...+.+-++.+.++|+|.|-++...- .+|+.+.++++.+
T Consensus 60 ~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~-------------~~p~~l~~~i~~~ 125 (232)
T 3igs_A 60 NLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTAR-------------QRPVAVEALLARI 125 (232)
T ss_dssp HHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSS-------------CCSSCHHHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECcccc-------------CCHHHHHHHHHHH
Confidence 466777654 889875432110 000112224556678999999886421 2334577888888
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
++. ++++++.+. ..+.++.+.++|+|.|.+.++... + .+... ...++.++
T Consensus 126 ~~~-g~~v~~~v~-----t~eea~~a~~~Gad~Ig~~~~g~t-------~------------~~~~~-----~~~~~~i~ 175 (232)
T 3igs_A 126 HHH-HLLTMADCS-----SVDDGLACQRLGADIIGTTMSGYT-------T------------PDTPE-----EPDLPLVK 175 (232)
T ss_dssp HHT-TCEEEEECC-----SHHHHHHHHHTTCSEEECTTTTSS-------S------------SSCCS-----SCCHHHHH
T ss_pred HHC-CCEEEEeCC-----CHHHHHHHHhCCCCEEEEcCccCC-------C------------CCCCC-----CCCHHHHH
Confidence 765 788887643 356788999999999854332211 0 00001 12356666
Q ss_pred HHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 294 ~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
++++. ++|||+.|||.+++|+.+++.+||++|+||++++.- ....+++.+.++
T Consensus 176 ~l~~~--------~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p-~~~~~~~~~~i~ 228 (232)
T 3igs_A 176 ALHDA--------GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRL-EHICGWYNDALK 228 (232)
T ss_dssp HHHHT--------TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCH-HHHHHHHHHHHH
T ss_pred HHHhc--------CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCH-HHHHHHHHHHHH
Confidence 76653 599999999999999999999999999999999852 444555555543
No 77
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.28 E-value=3.7e-10 Score=107.68 Aligned_cols=192 Identities=15% Similarity=0.138 Sum_probs=120.4
Q ss_pred HHHHHhhCCCCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCC--CCCCc---cccccc--cccChhHHHHHHH
Q 014581 140 FKQLKALYPDKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCP--HGMPE---RKMGAA--VGQDCRLLEEVCG 211 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP--~~~~~---~~~G~~--l~~~~~~v~~iv~ 211 (422)
+.++++. ....++.++..+ .+.+++.+.++.++++|+|.||+++.+. ..+.. +.+-.+ -+-+++...++++
T Consensus 9 ~~~~~~~-~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~ 87 (262)
T 1rd5_A 9 MAALMAK-GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLR 87 (262)
T ss_dssp HHHHHHT-TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhc-CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3344433 245688888643 3568899999999999999999997543 22110 000001 1135677778899
Q ss_pred HHhhccCccEEEEECCCCCChHH--HHHHHHHcCCCEEEEecCCccc----------cc------ccccCC----CCCC-
Q 014581 212 WINAKATVPVWAKMTPNITDITE--PARVALRSGSEGVSAINTIMSV----------MG------IDLKTL----RPEP- 268 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~~~~~--~a~~l~~aGadgi~v~n~~~~~----------~~------id~e~~----~p~~- 268 (422)
++|+.+++|+++....+ ... ..+.+.++|+|++++.+..... .+ +...+. +...
T Consensus 88 ~ir~~~~~Pv~~m~~~~---~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~ 164 (262)
T 1rd5_A 88 EVTPELSCPVVLLSYYK---PIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITK 164 (262)
T ss_dssp HHGGGCSSCEEEECCSH---HHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHH
T ss_pred HHHhcCCCCEEEEecCc---HHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHh
Confidence 99988899998853221 110 1233788999999876532110 00 000110 0000
Q ss_pred CCCCCC---ccCCCCCC--CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 269 CVEGYS---TPGGYSCK--AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 269 ~~~~~~---~~gG~sG~--~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
...++. ...|++|. ...+..++.++++++.. ++||++.|||.+++++.+++.+|||+|.+||+++..
T Consensus 165 ~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~-------~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~ 236 (262)
T 1rd5_A 165 ASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT-------NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQ 236 (262)
T ss_dssp HCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC-------SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred cCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc-------CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhH
Confidence 000111 12444554 34455677888888865 799999999999999999999999999999999865
No 78
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.25 E-value=5.8e-11 Score=111.71 Aligned_cols=162 Identities=14% Similarity=0.064 Sum_probs=110.9
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA- 217 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~- 217 (422)
.++++++.+ +.|+++.-+ -.++++ ++.+.++|||.+-++.. ...+++.+.++++.+.+..
T Consensus 65 ~i~~i~~~~-~ipv~v~gg-i~~~~~----~~~~l~~Gad~V~lg~~-------------~l~~p~~~~~~~~~~g~~~~ 125 (244)
T 2y88_A 65 LLAEVVGKL-DVQVELSGG-IRDDES----LAAALATGCARVNVGTA-------------ALENPQWCARVIGEHGDQVA 125 (244)
T ss_dssp HHHHHHHHC-SSEEEEESS-CCSHHH----HHHHHHTTCSEEEECHH-------------HHHCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHhc-CCcEEEECC-CCCHHH----HHHHHHcCCCEEEECch-------------HhhChHHHHHHHHHcCCCEE
Confidence 455566655 789999875 245554 44455679999987632 2356677777777664322
Q ss_pred ---Ccc-----EEEEECCCCC---ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcch
Q 014581 218 ---TVP-----VWAKMTPNIT---DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286 (422)
Q Consensus 218 ---~iP-----v~vKl~~~~~---~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p 286 (422)
+.+ ..||+..... +..+.++.+.+.|++.|.++++... +.+.|+
T Consensus 126 ~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~---------------------~~~~g~---- 180 (244)
T 2y88_A 126 VGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKD---------------------GTLGGP---- 180 (244)
T ss_dssp EEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTT---------------------TTTSCC----
T ss_pred EEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCc---------------------cccCCC----
Confidence 221 2344442111 3578899999999999988875432 112221
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh---CCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL---GANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a---GAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.++.++++++.+ ++|||++|||.+++|+.+++.+ ||++|++||+++.+ |+.++++.+.
T Consensus 181 -~~~~~~~l~~~~-------~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~-~~~~~~~~~~ 241 (244)
T 2y88_A 181 -NLDLLAGVADRT-------DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYAR-RFTLPQALAA 241 (244)
T ss_dssp -CHHHHHHHHTTC-------SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT-SSCHHHHHHH
T ss_pred -CHHHHHHHHHhC-------CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCC-CcCHHHHHHH
Confidence 256667776643 7999999999999999999998 99999999999976 6666666554
No 79
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.22 E-value=3.7e-10 Score=117.22 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=118.5
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcC
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSG 243 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aG 243 (422)
+.+.++++.++|+|+|.++... .+.+.+.+.++++++.+ ++|++.+-.. ..+.++.+.++|
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~--------------g~~~~~~~~i~~l~~~~p~~pvi~G~v~----t~~~a~~~~~~G 295 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAH--------------GHSAGVLRKIAEIRAHFPNRTLIAGNIA----TAEGARALYDAG 295 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSC--------------TTCHHHHHHHHHHHHHCSSSCEEEEEEC----SHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCeEEEeeec--------------CcchhHHHHHHHHHHHCCCCcEeCCCcc----CHHHHHHHHHcC
Confidence 3456778888899999988521 11234567788888887 8999865332 257888999999
Q ss_pred CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHH
Q 014581 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323 (422)
Q Consensus 244 adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~ 323 (422)
+|+|.+.+..... ... + ...++.+| .+..++++++.... .++|||++|||.+++|+.
T Consensus 296 ad~I~vg~g~g~~-~~t----r---------~~~~~~~p-----~~~~l~~~~~~~~~----~~ipvia~GGi~~~~di~ 352 (491)
T 1zfj_A 296 VDVVKVGIGPGSI-CTT----R---------VVAGVGVP-----QVTAIYDAAAVARE----YGKTIIADGGIKYSGDIV 352 (491)
T ss_dssp CSEEEECSSCCTT-BCH----H---------HHTCCCCC-----HHHHHHHHHHHHHH----TTCEEEEESCCCSHHHHH
T ss_pred CCEEEECccCCcc-eEE----e---------eecCCCCC-----cHHHHHHHHHHHhh----cCCCEEeeCCCCCHHHHH
Confidence 9999886432110 000 0 01122222 23455566654432 279999999999999999
Q ss_pred HHHHhCCCEEEEhhHHHh-------------------------------------------------hh-----------
Q 014581 324 EFILLGANTVQVCTGVMM-------------------------------------------------HG----------- 343 (422)
Q Consensus 324 ~~l~aGAd~V~vgtall~-------------------------------------------------~G----------- 343 (422)
+++++||++|++||+++. .|
T Consensus 353 kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~ 432 (491)
T 1zfj_A 353 KALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAA 432 (491)
T ss_dssp HHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCH
T ss_pred HHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcCcceEecCcCCCH
Confidence 999999999999999972 12
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 344 p~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
..++..+..+|+..|...|..++.++...
T Consensus 433 ~~~~~~l~~~l~~~~~~~G~~~~~~l~~~ 461 (491)
T 1zfj_A 433 SDIVFQMLGGIRSGMGYVGAGDIQELHEN 461 (491)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcccHHHHHhc
Confidence 23678888999999999999999999754
No 80
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.21 E-value=4.8e-10 Score=107.12 Aligned_cols=189 Identities=19% Similarity=0.194 Sum_probs=114.7
Q ss_pred HHHHHhhCCCCeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc--------c--ccChhHHHH
Q 014581 140 FKQLKALYPDKILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA--------V--GQDCRLLEE 208 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~--------l--~~~~~~v~~ 208 (422)
++++|++- ...+|.-|.. ..+.+.+.++++.++++|+|+||+++ |.+++..+ |.. + +-+.+.+-+
T Consensus 8 f~~~~~~~-~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP~ad-gp~i~~a~~~al~~G~~~~~~~~ 83 (262)
T 2ekc_A 8 FTELKEKR-EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF--PFSDPVAD-GPTIQVAHEVALKNGIRFEDVLE 83 (262)
T ss_dssp HHHHHHHT-BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC--CCSCCTTS-CHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHhcC-CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC--CCCCcccc-cHHHHHHHHHHHHcCCCHHHHHH
Confidence 44444431 3456666654 35778999999999999999999986 33322111 110 1 123455667
Q ss_pred HHHHHhhcc-CccEEEEECCCCC-----ChHHHHHHHHHcCCCEEEEecCCccc----------ccccc-cCCCCCCC--
Q 014581 209 VCGWINAKA-TVPVWAKMTPNIT-----DITEPARVALRSGSEGVSAINTIMSV----------MGIDL-KTLRPEPC-- 269 (422)
Q Consensus 209 iv~~vr~~~-~iPv~vKl~~~~~-----~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id~-e~~~p~~~-- 269 (422)
+++++|+.+ ++|+++ ++ ++. ...++++.+.++|+|++++..-.... .+++. .-..|...
T Consensus 84 ~v~~ir~~~~~~Pi~~-m~-y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~ 161 (262)
T 2ekc_A 84 LSETLRKEFPDIPFLL-MT-YYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRK 161 (262)
T ss_dssp HHHHHHHHCTTSCEEE-EC-CHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHH
T ss_pred HHHHHHhhcCCCCEEE-Ee-cCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHH
Confidence 888999888 899988 31 111 23678899999999999876422110 00110 00001000
Q ss_pred --------CCCCC---ccCCCCCCC--cc-hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 270 --------VEGYS---TPGGYSCKA--VH-PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 270 --------~~~~~---~~gG~sG~~--i~-p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
..++. ..-|..|.. .. +...+.++++++.. ++||+..+||.+++++.+ +.+|||+|.+
T Consensus 162 rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-------~~pv~vG~GI~t~e~~~~-~~~gADgvIV 233 (262)
T 2ekc_A 162 RIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-------DKPVVVGFGVSKKEHARE-IGSFADGVVV 233 (262)
T ss_dssp HHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC-------CSCEEEESSCCSHHHHHH-HHTTSSEEEE
T ss_pred HHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-------CCCEEEeCCCCCHHHHHH-HHcCCCEEEE
Confidence 00010 112333322 11 22346777887765 799999999999999999 8899999999
Q ss_pred hhHHHhh
Q 014581 336 CTGVMMH 342 (422)
Q Consensus 336 gtall~~ 342 (422)
||+++..
T Consensus 234 GSai~~~ 240 (262)
T 2ekc_A 234 GSALVKL 240 (262)
T ss_dssp CHHHHHH
T ss_pred CHHHHhh
Confidence 9999876
No 81
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.17 E-value=1.3e-09 Score=113.51 Aligned_cols=168 Identities=17% Similarity=0.140 Sum_probs=115.3
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-C-ccEEEEECCCCCChHHHHHHHHHcC
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-T-VPVWAKMTPNITDITEPARVALRSG 243 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~-iPv~vKl~~~~~~~~~~a~~l~~aG 243 (422)
.+.++.+.+.|++.+.++...-+ ...+.+.++++++.. + .|++++-..+ .+.++.+.++|
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~--------------~~~~~~~i~~lk~~~~~~~~Vi~G~V~t----~~~a~~l~~aG 305 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGF--------------SEWQKITIGWIREKYGDKVKVGAGNIVD----GEGFRYLADAG 305 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCC--------------SHHHHHHHHHHHHHHGGGSCEEEEEECS----HHHHHHHHHHT
T ss_pred HHHHHHHHhhhccceEEecccCc--------------ccchhhHHHHHHHhCCCCceEeeccccC----HHHHHHHHHhC
Confidence 44467777779999998764211 122455567787765 5 8999875432 56788999999
Q ss_pred CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhc---cCCCCCceEEEecCCCCHH
Q 014581 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKS---EFNDKDYSLSGIGGVETGG 320 (422)
Q Consensus 244 adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~---~~~~~~ipIIa~GGI~s~~ 320 (422)
+|++.+ +..++ .+. +.+. ..+. |. | .+..+.++++.+.+ +.+ .++|||+.|||.++.
T Consensus 306 ad~I~V-g~~~g--~~~--~~r~---------~~~~-g~---p-~~~~l~~v~~~~~~~~~~~~-~~ipvia~GGi~~~~ 365 (503)
T 1me8_A 306 ADFIKI-GIGGG--SIC--ITRE---------QKGI-GR---G-QATAVIDVVAERNKYFEETG-IYIPVCSDGGIVYDY 365 (503)
T ss_dssp CSEEEE-CSSCS--TTC--CSTT---------TTCC-CC---C-HHHHHHHHHHHHHHHHHHHS-EECCEEEESCCCSHH
T ss_pred CCeEEe-cccCC--cCc--cccc---------ccCC-CC---c-hHHHHHHHHHHHHHHhhhcC-CCceEEEeCCCCCHH
Confidence 999998 33222 111 1010 0111 11 2 23455666555431 000 159999999999999
Q ss_pred HHHHHHHhCCCEEEEhhHHHh-----------------------------------h------------------h--hH
Q 014581 321 DAAEFILLGANTVQVCTGVMM-----------------------------------H------------------G--YG 345 (422)
Q Consensus 321 da~~~l~aGAd~V~vgtall~-----------------------------------~------------------G--p~ 345 (422)
|+.++|++||++||+||.|+. . | ..
T Consensus 366 di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~v~~ 445 (503)
T 1me8_A 366 HMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKD 445 (503)
T ss_dssp HHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------CCCEEEEECCBCHHH
T ss_pred HHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecccceeEecCCCCcHHH
Confidence 999999999999999999962 0 0 15
Q ss_pred HHHHHHHHHHHHHHHcCCCCHHHhhc
Q 014581 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371 (422)
Q Consensus 346 ~i~~i~~~l~~~m~~~G~~si~d~~G 371 (422)
.+..+..+|+..|...|..+|+|++.
T Consensus 446 ~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 446 NVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp HHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 68899999999999999999999986
No 82
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.15 E-value=4.7e-10 Score=106.89 Aligned_cols=172 Identities=14% Similarity=0.056 Sum_probs=95.2
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHh---h
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN---A 215 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr---~ 215 (422)
.++++++.. +.|++++-+ -.+.+++. .+.+.|+|++-+.-..... ..+++.+.++++... +
T Consensus 65 ~i~~i~~~~-~iPvi~~gg-i~~~~~i~----~~~~~Gad~v~lg~~~~~~----------~~~~~~~~~~~~~~g~~~~ 128 (266)
T 2w6r_A 65 MIRFVRPLT-TLPIIASGG-AGKMEHFL----EAFLAGADKALAASVFHFR----------EIDMRELKEYLKKHGGSGQ 128 (266)
T ss_dssp HHHHHGGGC-CSCEEEESC-CCSTHHHH----HHHHHTCSEEECCCCC----------------CHHHHHHCC----CCC
T ss_pred HHHHHHHhc-CCCEEEECC-CCCHHHHH----HHHHcCCcHhhhhHHHHhC----------CCCHHHHHHHHHHcCCCCC
Confidence 355566654 789998743 23445533 3334699999876321100 015566666655433 1
Q ss_pred c--cCccE-------EEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 216 K--ATVPV-------WAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 216 ~--~~iPv-------~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
. ..+++ .|++.... .+..+.++.+.+.|++.|.++++... |...|+
T Consensus 129 ~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~---------------------g~~~g~ 187 (266)
T 2w6r_A 129 AVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKSGY 187 (266)
T ss_dssp EEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTT---------------------TTCSCC
T ss_pred EEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCC---------------------CCcCCC
Confidence 1 11222 23332211 13578889999999999988754321 112222
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcC
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G 362 (422)
.++.++++++.+ ++|||++|||.+++|+.+++.+||++|++||+++.. +..+ +++.+||.++|
T Consensus 188 -----~~~~i~~l~~~~-------~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~-~~~~----~~~~~~l~~~g 250 (266)
T 2w6r_A 188 -----DTEMIRFVRPLT-------TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR-EIDM----RELKEYLKKHG 250 (266)
T ss_dssp -----CHHHHHHHGGGC-------CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC----------------------
T ss_pred -----CHHHHHHHHHHc-------CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC-CCCH----HHHHHHHHHCC
Confidence 256677777654 799999999999999999999999999999999876 5444 34566788888
Q ss_pred CC
Q 014581 363 FS 364 (422)
Q Consensus 363 ~~ 364 (422)
|.
T Consensus 251 ~~ 252 (266)
T 2w6r_A 251 VN 252 (266)
T ss_dssp --
T ss_pred Cc
Confidence 84
No 83
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.14 E-value=7.9e-10 Score=104.03 Aligned_cols=162 Identities=13% Similarity=0.058 Sum_probs=105.9
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++++++.+ +.|+++.-+ -.++++ ++.+.++|||.+-++.. ...+++.+.++++.......
T Consensus 66 ~i~~i~~~~-~ipv~v~gg-I~~~~~----~~~~l~~Gad~V~lg~~-------------~l~~p~~~~~~~~~~g~~~~ 126 (244)
T 1vzw_A 66 LIAEVAQAM-DIKVELSGG-IRDDDT----LAAALATGCTRVNLGTA-------------ALETPEWVAKVIAEHGDKIA 126 (244)
T ss_dssp HHHHHHHHC-SSEEEEESS-CCSHHH----HHHHHHTTCSEEEECHH-------------HHHCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHhc-CCcEEEECC-cCCHHH----HHHHHHcCCCEEEECch-------------HhhCHHHHHHHHHHcCCcEE
Confidence 455566654 789998875 245554 44455679999987631 23456677777766532222
Q ss_pred ccEEEE-----ECCCC---CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 219 VPVWAK-----MTPNI---TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 219 iPv~vK-----l~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
+.+-+| ..... .+..+.++.+.+.|++.|.++++... +...|. .++
T Consensus 127 ~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~---------------------~~~~g~-----~~~ 180 (244)
T 1vzw_A 127 VGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKD---------------------GTLQGP-----NLE 180 (244)
T ss_dssp EEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC----------------------------CC-----CHH
T ss_pred EEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcc---------------------cccCCC-----CHH
Confidence 222222 11100 04678889999999999988865321 111121 256
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh---CCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL---GANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a---GAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.++++++.+ ++|||++|||.+++|+.+++.+ ||++|++||+++.+ ++.++++.+.
T Consensus 181 ~~~~i~~~~-------~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~-~~~~~~~~~~ 238 (244)
T 1vzw_A 181 LLKNVCAAT-------DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK-AFTLEEALEA 238 (244)
T ss_dssp HHHHHHHTC-------SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT-SSCHHHHHHH
T ss_pred HHHHHHHhc-------CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcC-CCCHHHHHHH
Confidence 677777654 7999999999999999999998 99999999999976 5445555443
No 84
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.14 E-value=3.4e-11 Score=113.87 Aligned_cols=163 Identities=13% Similarity=0.101 Sum_probs=34.8
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHh-hcc
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN-AKA 217 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr-~~~ 217 (422)
.++++++.+ +.|++++=+ -.++++. +.+.+.|+|++.+. ..+..+|+.+.++.+.+- +..
T Consensus 70 ~i~~i~~~~-~ipvi~~Gg-i~~~~~~----~~~l~~Gad~V~ig-------------~~~l~dp~~~~~~~~~~g~~~i 130 (247)
T 3tdn_A 70 MIRFVRPLT-TLPIIASGG-AGKMEHF----LEAFLRGADKVSIN-------------TAAVENPSLITQIAQTFGSQAV 130 (247)
T ss_dssp HHHHHGGGC-CSCEEEESC-CCSHHHH----HHHHHTTCSEECCS-------------HHHHHCTHHHHHHHHHHC----
T ss_pred HHHHHHHhC-CCCEEEeCC-CCCHHHH----HHHHHcCCCeeehh-------------hHHhhChHHHHHHHHHhCCCcE
Confidence 355666655 789998753 2356553 33345699999654 223356777777766552 211
Q ss_pred ----Ccc-----EEEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 218 ----TVP-----VWAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 218 ----~iP-----v~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
+.+ ..|++.... .+..++++.+.+.|++.|.++++... |.+.|+
T Consensus 131 v~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~---------------------g~~~g~-- 187 (247)
T 3tdn_A 131 VVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKSGY-- 187 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCC---------------------CCcCCC--
Confidence 221 123332111 13567888999999999987764321 112221
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
.++.++++++.+ ++|||++|||.+++|+.+++.+||++|++||+++.+ |++++++.+.+
T Consensus 188 ---~~~~~~~i~~~~-------~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~-p~~~~~~~~~~ 246 (247)
T 3tdn_A 188 ---DTEMIRFVRPLT-------TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN-PSLITQIAQTF 246 (247)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ---CHHHHHHHHHhC-------CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcC-cHHHHHHHHhc
Confidence 234566677665 799999999999999999999999999999999977 99998887654
No 85
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.13 E-value=2.2e-09 Score=101.46 Aligned_cols=172 Identities=13% Similarity=0.111 Sum_probs=111.6
Q ss_pred HHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh
Q 014581 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
.++.++++++.. +.|+++.-+ -.++++ ++.+.++|||++-+.- ....+++.+.++++....
T Consensus 62 ~~~~i~~i~~~~-~ipvi~~gg-I~~~~~----~~~~~~~Gad~V~lg~-------------~~l~~p~~~~~~~~~~g~ 122 (253)
T 1thf_D 62 MLELVEKVAEQI-DIPFTVGGG-IHDFET----ASELILRGADKVSINT-------------AAVENPSLITQIAQTFGS 122 (253)
T ss_dssp HHHHHHHHHTTC-CSCEEEESS-CCSHHH----HHHHHHTTCSEEEESH-------------HHHHCTHHHHHHHHHHCG
T ss_pred cHHHHHHHHHhC-CCCEEEeCC-CCCHHH----HHHHHHcCCCEEEECh-------------HHHhChHHHHHHHHHcCC
Confidence 345566777654 789998764 235554 3444457999997753 123456667777766532
Q ss_pred -ccCccE---------EEEECCCCC----ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 216 -KATVPV---------WAKMTPNIT----DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 216 -~~~iPv---------~vKl~~~~~----~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
...+.+ .|++..... +..+.++.+.+.|++.|.++++... +...|
T Consensus 123 ~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~---------------------g~~~g 181 (253)
T 1thf_D 123 QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKSG 181 (253)
T ss_dssp GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTT---------------------TSCSC
T ss_pred CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCC---------------------CCCCC
Confidence 111222 333322111 3578899999999999988754321 11222
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHc
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMH 361 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~ 361 (422)
+ .++.++++++.+ ++|||++|||.+++|+.+++.+||++|++||+++.. +.-+++. .+++.+.
T Consensus 182 ~-----~~~~~~~l~~~~-------~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~-~~~~~~~----~~~l~~~ 244 (253)
T 1thf_D 182 Y-----DTEMIRFVRPLT-------TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR-EIDVREL----KEYLKKH 244 (253)
T ss_dssp C-----CHHHHHHHGGGC-------CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT-CSCHHHH----HHHHHHT
T ss_pred C-----CHHHHHHHHHhc-------CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcC-CCCHHHH----HHHHHHc
Confidence 2 246666776644 799999999999999999999999999999999976 4333333 4456677
Q ss_pred CCC
Q 014581 362 NFS 364 (422)
Q Consensus 362 G~~ 364 (422)
|+.
T Consensus 245 g~~ 247 (253)
T 1thf_D 245 GVN 247 (253)
T ss_dssp TCC
T ss_pred CCc
Confidence 763
No 86
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.13 E-value=2e-09 Score=99.78 Aligned_cols=127 Identities=18% Similarity=0.205 Sum_probs=87.6
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCccccccccccCh-hHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCE
Q 014581 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC-RLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEG 246 (422)
Q Consensus 169 a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~-~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadg 246 (422)
++.+.++|+|.+.++...-. ++ +.+.++++++++.. +.++++... + .+.++.+.+.|+|.
T Consensus 81 i~~~~~~Gad~v~l~~~~~~-------------~p~~~~~~~i~~~~~~~~~~~v~~~~~----t-~~e~~~~~~~G~d~ 142 (223)
T 1y0e_A 81 VDELIESQCEVIALDATLQQ-------------RPKETLDELVSYIRTHAPNVEIMADIA----T-VEEAKNAARLGFDY 142 (223)
T ss_dssp HHHHHHHTCSEEEEECSCSC-------------CSSSCHHHHHHHHHHHCTTSEEEEECS----S-HHHHHHHHHTTCSE
T ss_pred HHHHHhCCCCEEEEeeeccc-------------CcccCHHHHHHHHHHhCCCceEEecCC----C-HHHHHHHHHcCCCE
Confidence 44456779999999864211 11 23567888888765 677776532 3 33477789999999
Q ss_pred EEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHH
Q 014581 247 VSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFI 326 (422)
Q Consensus 247 i~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l 326 (422)
|.+.+..... . ..+.. ..+..++.++++++.+ ++||++.|||.+++|+.+++
T Consensus 143 i~~~~~g~t~------~-----------~~~~~----~~~~~~~~~~~~~~~~-------~ipvia~GGI~~~~~~~~~~ 194 (223)
T 1y0e_A 143 IGTTLHGYTS------Y-----------TQGQL----LYQNDFQFLKDVLQSV-------DAKVIAEGNVITPDMYKRVM 194 (223)
T ss_dssp EECTTTTSST------T-----------STTCC----TTHHHHHHHHHHHHHC-------CSEEEEESSCCSHHHHHHHH
T ss_pred EEeCCCcCcC------C-----------CCCCC----CCcccHHHHHHHHhhC-------CCCEEEecCCCCHHHHHHHH
Confidence 8655432210 0 00100 0133466777787765 79999999999999999999
Q ss_pred HhCCCEEEEhhHHHh
Q 014581 327 LLGANTVQVCTGVMM 341 (422)
Q Consensus 327 ~aGAd~V~vgtall~ 341 (422)
.+|||+|++||+++.
T Consensus 195 ~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 195 DLGVHCSVVGGAITR 209 (223)
T ss_dssp HTTCSEEEECHHHHC
T ss_pred HcCCCEEEEChHHcC
Confidence 999999999999775
No 87
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.13 E-value=1.4e-09 Score=99.61 Aligned_cols=163 Identities=18% Similarity=0.163 Sum_probs=99.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~ 229 (422)
.|+++++. +.+.+++.++++.+.+.|+++||+++.+|+. .+.++.+|+.....+.+... .+
T Consensus 10 ~~~i~~~~-~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~-----------------~~~i~~ir~~~~~~~~ig~~-~v 70 (205)
T 1wa3_A 10 HKIVAVLR-ANSVEEAKEKALAVFEGGVHLIEITFTVPDA-----------------DTVIKELSFLKEKGAIIGAG-TV 70 (205)
T ss_dssp HCEEEEEC-CSSHHHHHHHHHHHHHTTCCEEEEETTSTTH-----------------HHHHHHTHHHHHTTCEEEEE-SC
T ss_pred CCEEEEEe-cCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-----------------HHHHHHHHHHCCCCcEEEec-cc
Confidence 48999997 6789999999999999999999999877642 23456666654212333332 12
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCccccccccc--CCCCC-CCCCCCC-----ccCCCCCCCcch---hHHHHHHHHHHH
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLK--TLRPE-PCVEGYS-----TPGGYSCKAVHP---IALGKVMSIAKM 298 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e--~~~p~-~~~~~~~-----~~gG~sG~~i~p---~al~~v~~i~~~ 298 (422)
.+. +-++.+.++|+|+| +...+.. .-++.- ...|. ++..... ...|.+.-.++| ..++.++++++.
T Consensus 71 ~~~-~~~~~a~~~Gad~i-v~~~~~~-~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~ 147 (205)
T 1wa3_A 71 TSV-EQCRKAVESGAEFI-VSPHLDE-EISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGP 147 (205)
T ss_dssp CSH-HHHHHHHHHTCSEE-ECSSCCH-HHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTT
T ss_pred CCH-HHHHHHHHcCCCEE-EcCCCCH-HHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHh
Confidence 233 45788889999999 5544321 000000 00000 0000000 001111111122 234555555544
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
++ ++||++.|||. .+++.+++.+||++|.+||+++.
T Consensus 148 ~~------~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FP------NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp CT------TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CC------CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 32 79999999996 89999999999999999999987
No 88
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.10 E-value=4.9e-09 Score=98.91 Aligned_cols=172 Identities=13% Similarity=0.077 Sum_probs=112.7
Q ss_pred HHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh
Q 014581 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
.++.++++++.+ +.|+++.=+ -.++++ ++.+.++|+|++-+.- ....+++.+.++.+....
T Consensus 63 ~~~~i~~i~~~~-~iPvi~~Gg-i~~~~~----~~~~~~~Gad~V~lg~-------------~~l~~p~~~~~~~~~~~~ 123 (252)
T 1ka9_F 63 LLDVVARVAERV-FIPLTVGGG-VRSLED----ARKLLLSGADKVSVNS-------------AAVRRPELIRELADHFGA 123 (252)
T ss_dssp HHHHHHHHHTTC-CSCEEEESS-CCSHHH----HHHHHHHTCSEEEECH-------------HHHHCTHHHHHHHHHHCG
T ss_pred cHHHHHHHHHhC-CCCEEEECC-cCCHHH----HHHHHHcCCCEEEECh-------------HHHhCcHHHHHHHHHcCC
Confidence 445567777655 789998653 234443 3444456999998752 223456677777776532
Q ss_pred c-cCccE---------EEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 216 K-ATVPV---------WAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 216 ~-~~iPv---------~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
. ..+.+ .|++.... .+..+.++.+.+.|++.|.++++... |...|
T Consensus 124 ~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~---------------------g~~~g 182 (252)
T 1ka9_F 124 QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRD---------------------GTKEG 182 (252)
T ss_dssp GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTT---------------------TTCSC
T ss_pred CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCC---------------------CCcCC
Confidence 1 11122 23332211 13578899999999999988754321 11122
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHc
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMH 361 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~ 361 (422)
+ .++.++++++.+ ++|||++|||.+++|+.+++.+||++|++||+++.. +.-++++ .+++.+.
T Consensus 183 ~-----~~~~i~~l~~~~-------~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~-~~~~~~~----~~~l~~~ 245 (252)
T 1ka9_F 183 Y-----DLRLTRMVAEAV-------GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG-EIPIPKL----KRYLAEK 245 (252)
T ss_dssp C-----CHHHHHHHHHHC-------SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT-SSCHHHH----HHHHHHT
T ss_pred C-----CHHHHHHHHHHc-------CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC-CCCHHHH----HHHHHHC
Confidence 1 257778888775 799999999999999999999999999999999976 4444444 3456677
Q ss_pred CCC
Q 014581 362 NFS 364 (422)
Q Consensus 362 G~~ 364 (422)
|+.
T Consensus 246 ~~~ 248 (252)
T 1ka9_F 246 GVH 248 (252)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 89
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.06 E-value=5.6e-10 Score=108.10 Aligned_cols=193 Identities=16% Similarity=0.141 Sum_probs=123.0
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc-c
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK-A 217 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~-~ 217 (422)
.|+++++.. +.||++-...++ .+-++.++++|||+| |.+..... . ++++.+++. .
T Consensus 69 ~i~~i~~~v-~iPvl~k~~i~~-----ide~qil~aaGAD~I--d~s~~~~~--~--------------~li~~i~~~~~ 124 (297)
T 4adt_A 69 KIEEIRKCI-SINVLAKVRIGH-----FVEAQILEELKVDML--DESEVLTM--A--------------DEYNHINKHKF 124 (297)
T ss_dssp HHHHHHTTC-CSEEEEEEETTC-----HHHHHHHHHTTCSEE--EEETTSCC--S--------------CSSCCCCGGGC
T ss_pred HHHHHHHhc-CCCEEEeccCCc-----HHHHHHHHHcCCCEE--EcCCCCCH--H--------------HHHHHHHhcCC
Confidence 355566655 899998764332 334455667899999 43211110 0 122233332 3
Q ss_pred CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccc--------------cccCCCCCCCCCCCCccCCCC--C
Q 014581 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI--------------DLKTLRPEPCVEGYSTPGGYS--C 281 (422)
Q Consensus 218 ~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~i--------------d~e~~~p~~~~~~~~~~gG~s--G 281 (422)
+.++++-. .+.. -+.++.+.|+|.|.+.|+.+....+ ++..+. ..++. +
T Consensus 125 g~~vvv~v----~~~~-Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~----------~d~L~t~~ 189 (297)
T 4adt_A 125 KTPFVCGC----TNLG-EALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLD----------ESEVYNFA 189 (297)
T ss_dssp SSCEEEEE----SSHH-HHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSC----------TTTHHHHH
T ss_pred CCeEEEEe----CCHH-HHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhcccc----------cccccccc
Confidence 67888743 2333 4667778999999877652211000 000000 00000 0
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEE--EecCCCCHHHHHHHHHhCCCEEEEhhHHHhhh-h-HHHHHHHHHHHHH
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLS--GIGGVETGGDAAEFILLGANTVQVCTGVMMHG-Y-GLVKRLCEELKDF 357 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipII--a~GGI~s~~da~~~l~aGAd~V~vgtall~~G-p-~~i~~i~~~l~~~ 357 (422)
.. ....++.++++++.+ ++||+ +.|||.+++|+.+++.+||++|.+||+++... | ..++++.+.+.+|
T Consensus 190 ~~-~~~~~~ll~~i~~~~-------~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 190 KK-LRAPIDLILLTRKLK-------RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp HH-HTCCHHHHHHHHHHT-------SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred cc-CCCCHHHHHHHHHhc-------CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 00 012356777787765 56765 99999999999999999999999999999742 3 5688899999999
Q ss_pred HHHcCCCCHHHhhcCCcccCC
Q 014581 358 MKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 358 m~~~G~~si~d~~G~~~~~~~ 378 (422)
++.+.+.++++-.|.+...+.
T Consensus 262 ~~~~~~~~i~~~~~~~~~~~~ 282 (297)
T 4adt_A 262 NNPKILLNVSLGLGKAMHGNT 282 (297)
T ss_dssp TCHHHHHHTTTTCCCCCCCCC
T ss_pred CCHHHHHHHHhhcccCCCCCC
Confidence 999999999998888777665
No 90
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.06 E-value=4.1e-08 Score=92.35 Aligned_cols=220 Identities=15% Similarity=0.117 Sum_probs=133.4
Q ss_pred eEeCCeecCCCceecCCCCCCCHHHHHHH-HHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccc
Q 014581 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRA-FDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIEL 127 (422)
Q Consensus 49 ~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~-~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~ 127 (422)
.++.|.+|.+.+++++|-. .+.+.+++. ..+|.-.|++- +. +. +. . +.+
T Consensus 4 l~i~~~~~~srl~~Gtgky-~~~~~~~~ai~asg~eivtva-~r----R~-~~-------~---------------~~~- 53 (268)
T 2htm_A 4 WKVGPVELKSRLILGSGKY-EDFGVMREAIAAAKAEVVTVS-VR----RV-EL-------K---------------APG- 53 (268)
T ss_dssp EEETTEEECCSEEEECSSC-SCHHHHHHHHHHTTCSEEEEE-EE----EC-C----------------------------
T ss_pred eEECCEEeecceEEecCCC-CCHHHHHHHHHHhCCCEEEEE-cc----cc-CC-------C---------------CCC-
Confidence 7899999999999999988 566666555 55799877654 11 11 00 0 000
Q ss_pred cCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHH
Q 014581 128 ISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206 (422)
Q Consensus 128 ~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v 206 (422)
-+.+++.|+ +.++..|-.+..+.++....++...+. |-+.|-|.+-.-+ . .+..|+..+
T Consensus 54 -----~~~~~~~i~-------~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~-----~---~l~pD~~~t 113 (268)
T 2htm_A 54 -----HVGLLEALE-------GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDP-----T---YLLPDPLET 113 (268)
T ss_dssp -------CHHHHTT-------TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCT-----T---TTCCCHHHH
T ss_pred -----cccHHHHHh-------hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCc-----c---ccCcCHHHH
Confidence 011222221 457888888778899988888876653 6788776653211 1 122344333
Q ss_pred HHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcch
Q 014581 207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286 (422)
Q Consensus 207 ~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p 286 (422)
-+-.+.+.+. ..-++..+.+ | ..+++++.+.|++.|.-.+...+ +.-|++
T Consensus 114 v~aa~~L~k~-Gf~Vlpy~~~---D-~~~ak~l~~~G~~aVmPlg~pIG-------------------sG~Gi~------ 163 (268)
T 2htm_A 114 LKAAERLIEE-DFLVLPYMGP---D-LVLAKRLAALGTATVMPLAAPIG-------------------SGWGVR------ 163 (268)
T ss_dssp HHHHHHHHHT-TCEECCEECS---C-HHHHHHHHHHTCSCBEEBSSSTT-------------------TCCCST------
T ss_pred HHHHHHHHHC-CCEEeeccCC---C-HHHHHHHHhcCCCEEEecCccCc-------------------CCcccC------
Confidence 3333333222 3333322333 3 47899999999998843332111 001221
Q ss_pred hHHHHHHHHHHHhhccCCCCC-ceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh--hhHHHHHHHHHHH
Q 014581 287 IALGKVMSIAKMMKSEFNDKD-YSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH--GYGLVKRLCEELK 355 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~-ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~--Gp~~i~~i~~~l~ 355 (422)
....++.+++... + +|||..|||.+++|+.+++.+|||+|+++|++... .....+.+.+.++
T Consensus 164 -~~~~L~~i~~~~~------~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 164 -TRALLELFAREKA------SLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp -THHHHHHHHHTTT------TSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHhcC------CCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 1244666766221 6 99999999999999999999999999999999862 2234455555443
No 91
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.05 E-value=5.1e-10 Score=105.67 Aligned_cols=186 Identities=19% Similarity=0.229 Sum_probs=115.5
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~ 229 (422)
.-||..+. ++ +.|+..+++|+.++-....||.... ...|.+=+++|+.+++| ++.+++||+.|..-.
T Consensus 12 ~~vimdv~---~~----eqa~iae~aGa~av~~l~~~p~d~r-~~gGv~Rm~dp~~I~~I----~~aVsIPVm~k~rig- 78 (291)
T 3o07_A 12 GGVIMDVV---TP----EQAKIAEKSGACAVMALESIPADMR-KSGKVCRMSDPKMIKDI----MNSVSIPVMAKVRIG- 78 (291)
T ss_dssp TCEEEEES---SH----HHHHHHHHHTCSEEEECSSCHHHHH-TTTCCCCCCCHHHHHHH----HTTCSSCEEEEEETT-
T ss_pred CCeeeecC---CH----HHHHHHHHhCchhhhhccCCCchhh-hcCCccccCCHHHHHHH----HHhCCCCeEEEEecC-
Confidence 34777774 33 3467788899999999999997421 22344455788766554 566699999998754
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCccc---ccccccCC-CCCC-CC-----------CCCC---ccCC------------
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSV---MGIDLKTL-RPEP-CV-----------EGYS---TPGG------------ 278 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~---~~id~e~~-~p~~-~~-----------~~~~---~~gG------------ 278 (422)
+ ..-|+.+.++|+|.|..+...... ..|+-..+ .|.. +. .|.. +.|.
T Consensus 79 -h-~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h 156 (291)
T 3o07_A 79 -H-FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKH 156 (291)
T ss_dssp -C-HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHH
T ss_pred -c-HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHH
Confidence 3 345889999999999777532211 01111111 1110 00 0000 1111
Q ss_pred ----------CCCCC----c------chhHHHHHHHHHHHhhccCCCCCceE--EEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 279 ----------YSCKA----V------HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 279 ----------~sG~~----i------~p~al~~v~~i~~~~~~~~~~~~ipI--Ia~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++|-. + ....++.|+++++.. ++|| |++|||.|++|+.+++.+|||+|+||
T Consensus 157 ~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~-------~IPVV~IAnGGI~TpedA~~~le~GaDGVmVG 229 (291)
T 3o07_A 157 IRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG-------KLPVVNFAAGGVATPADAALLMQLGCDGVFVG 229 (291)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT-------SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc-------CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEc
Confidence 01110 0 012356777777764 6787 57999999999999999999999999
Q ss_pred hHHHhhh-hH-HHHHHHHHHHHH
Q 014581 337 TGVMMHG-YG-LVKRLCEELKDF 357 (422)
Q Consensus 337 tall~~G-p~-~i~~i~~~l~~~ 357 (422)
|+++..+ |. ..+.+.+.+..|
T Consensus 230 rAI~~s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 230 SGIFKSSNPVRLATAVVEATTHF 252 (291)
T ss_dssp GGGGGSSCHHHHHHHHHHHHHTT
T ss_pred hHHhCCCCHHHHHHHHHHHHHhc
Confidence 9999842 43 355555555433
No 92
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.02 E-value=2.7e-09 Score=102.26 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=119.0
Q ss_pred HHHHHhhCCCCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc--------c--ccChhHHHH
Q 014581 140 FKQLKALYPDKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA--------V--GQDCRLLEE 208 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~--------l--~~~~~~v~~ 208 (422)
+++++++. ...++.-|..| .+.+.+.+.++.++++ +|+|||++ |.+++..+ |.. + +-+.+.+-+
T Consensus 7 f~~~~~~~-~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~--PfsdP~ad-Gp~Iq~a~~~Al~~G~~~~~~~~ 81 (271)
T 1ujp_A 7 FAKARSEG-RAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGL--PYSDPLGD-GPVIQRASELALRKGMSVQGALE 81 (271)
T ss_dssp HHHHHHTT-BCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEEC--CCCC-----CHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHcC-CceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECC--CCCCcccc-cHHHHHHHHHHHHcCCCHHHHHH
Confidence 34444431 34567777544 4778899999999998 99999986 44332111 111 1 124455668
Q ss_pred HHHHHhhccCccEEEE--ECCCC-CChHHHHHHHHHcCCCEEEEecCCccc----------cccc-ccCCCCCCC-----
Q 014581 209 VCGWINAKATVPVWAK--MTPNI-TDITEPARVALRSGSEGVSAINTIMSV----------MGID-LKTLRPEPC----- 269 (422)
Q Consensus 209 iv~~vr~~~~iPv~vK--l~~~~-~~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id-~e~~~p~~~----- 269 (422)
+++++|+.+++|+++= ..+-+ ....++++.+.++|+||+++..-.... .+++ +.-..|...
T Consensus 82 ~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~ 161 (271)
T 1ujp_A 82 LVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIA 161 (271)
T ss_dssp HHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHH
T ss_pred HHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHH
Confidence 8888988889999882 11100 134678889999999998765432110 0010 000000000
Q ss_pred -----CCCCC---ccCCCCCCC--cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 270 -----VEGYS---TPGGYSCKA--VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 270 -----~~~~~---~~gG~sG~~--i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
..++. ..-|+.|.. ..+...+.++++++.. ++||+..|||++++++.++ +|||+|.|||++
T Consensus 162 ~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-------~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi 232 (271)
T 1ujp_A 162 TVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-------ALPVAVGFGVSGKATAAQA--AVADGVVVGSAL 232 (271)
T ss_dssp HHHTTCCSCEEEECC------------CCHHHHHHHHTTC-------CSCEEEESCCCSHHHHHHH--TTSSEEEECHHH
T ss_pred HHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-------CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHH
Confidence 00111 122333432 1122245667777654 7999999999999999996 999999999999
Q ss_pred HhhhhH---HHHHHHHHHHHHH
Q 014581 340 MMHGYG---LVKRLCEELKDFM 358 (422)
Q Consensus 340 l~~Gp~---~i~~i~~~l~~~m 358 (422)
.... . .++++.++++..+
T Consensus 233 ~~~~-~~~~~~~~fv~~l~~~~ 253 (271)
T 1ujp_A 233 VRAL-EEGRSLAPLLQEIRQGL 253 (271)
T ss_dssp HHHH-HTTCCHHHHHHHHHHHH
T ss_pred hccc-chHHHHHHHHHHHHHHH
Confidence 9763 2 4566666665544
No 93
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.01 E-value=8.5e-09 Score=94.71 Aligned_cols=151 Identities=16% Similarity=0.226 Sum_probs=103.4
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++++++.+++.|+.+.++-....+. .++.+.++|+|++-++... ..+.+.++++.+++. +
T Consensus 43 ~i~~ir~~~~~~~i~~~~~~~~~~~~---~~~~~~~~Gad~v~v~~~~---------------~~~~~~~~~~~~~~~-g 103 (211)
T 3f4w_A 43 AIKAIKEKYPHKEVLADAKIMDGGHF---ESQLLFDAGADYVTVLGVT---------------DVLTIQSCIRAAKEA-G 103 (211)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHhCCCCEEEEEEEeccchHH---HHHHHHhcCCCEEEEeCCC---------------ChhHHHHHHHHHHHc-C
Confidence 46666666668899988863323332 3667778899999986421 113456677777665 6
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
+++++-+. +..+..+.++.+.+.|+|.|.+...+.+ .+ .+ +..++.++++++.
T Consensus 104 ~~~~v~~~-~~~t~~~~~~~~~~~g~d~i~v~~g~~g------~~------------~~--------~~~~~~i~~l~~~ 156 (211)
T 3f4w_A 104 KQVVVDMI-CVDDLPARVRLLEEAGADMLAVHTGTDQ------QA------------AG--------RKPIDDLITMLKV 156 (211)
T ss_dssp CEEEEECT-TCSSHHHHHHHHHHHTCCEEEEECCHHH------HH------------TT--------CCSHHHHHHHHHH
T ss_pred CeEEEEec-CCCCHHHHHHHHHHcCCCEEEEcCCCcc------cc------------cC--------CCCHHHHHHHHHH
Confidence 66666422 1235567788999999999866532111 00 00 1124667778776
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++ ++||++.|||. ++++.+++.+|||+|.+||+++..
T Consensus 157 ~~------~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 157 RR------KARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp CS------SCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred cC------CCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCC
Confidence 53 79999999996 999999999999999999999875
No 94
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.98 E-value=1.2e-08 Score=105.73 Aligned_cols=164 Identities=18% Similarity=0.142 Sum_probs=109.8
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCC
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSE 245 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGad 245 (422)
.+.++++.++|+|.+.+.-. + +. ...+-+.++++++..++|+++|-... .+.++.+. |+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdta--~-----------G~-~~~~L~~I~~l~~~~~vpvi~k~v~~----~~~a~~l~--G~d 289 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTA--H-----------AH-NLKAIKSMKEMRQKVDADFIVGNIAN----PKAVDDLT--FAD 289 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECS--C-----------CC-CHHHHHHHHHHHHTCCSEEEEEEECC----HHHHTTCT--TSS
T ss_pred HHHHHHHHHhcCCceEEEec--C-----------Cc-EeehhhHHHHHHHHhCCccccCCcCC----HHHHHHhh--CCC
Confidence 34567777889999876631 1 01 12234456777777799999986542 44566666 999
Q ss_pred EEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHH
Q 014581 246 GVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEF 325 (422)
Q Consensus 246 gi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~ 325 (422)
+|.+ +...+ .+- +.+. ..|+..+. ..++..+.++.+.. ++|||++|||.++.|+.++
T Consensus 290 ~v~v-g~g~g--~~~--~~r~---------~~~~g~~~--~~~l~~~~~~~~~~-------~vpVia~GGi~~~~di~ka 346 (486)
T 2cu0_A 290 AVKV-GIGPG--SIC--TTRI---------VAGVGVPQ--ITAVAMVADRAQEY-------GLYVIADGGIRYSGDIVKA 346 (486)
T ss_dssp EEEE-CSSCS--TTB--CHHH---------HTCCCCCH--HHHHHHHHHHHHHH-------TCEEEEESCCCSHHHHHHH
T ss_pred eEEE-eeeec--cce--eeeE---------EeecCcch--HHHHHHHHHHHHHc-------CCcEEecCCCCCHHHHHHH
Confidence 9998 43222 111 0000 12222221 12333344444433 7999999999999999999
Q ss_pred HHhCCCEEEEhhHHHh-------------------------------------------------hh-----------hH
Q 014581 326 ILLGANTVQVCTGVMM-------------------------------------------------HG-----------YG 345 (422)
Q Consensus 326 l~aGAd~V~vgtall~-------------------------------------------------~G-----------p~ 345 (422)
|.+|||+|++||.++. +| ..
T Consensus 347 lalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (486)
T 2cu0_A 347 IAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSE 426 (486)
T ss_dssp HHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHH
T ss_pred HHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccceEEeecccCCHHH
Confidence 9999999999999882 22 23
Q ss_pred HHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 346 LVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 346 ~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
++..+..+|+..|...|..+++++...
T Consensus 427 ~~~~l~~~lr~~m~~~G~~~~~~l~~~ 453 (486)
T 2cu0_A 427 VLYQLVGGLKAGMGYVGARNIRELKEK 453 (486)
T ss_dssp HHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCcCCHHHHHhh
Confidence 678888999999999999999999754
No 95
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.97 E-value=2.6e-08 Score=93.05 Aligned_cols=189 Identities=13% Similarity=0.116 Sum_probs=126.2
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc----CCCCCCCccccccccccChhHHHHHHHHHhhc--cCccEEEE
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF----SCPHGMPERKMGAAVGQDCRLLEEVCGWINAK--ATVPVWAK 224 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~----scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~--~~iPv~vK 224 (422)
.+..||. ..+-..+.+.++.++++|+|.+.+.+ ..||. .+| + ++++++|+. +++|+-++
T Consensus 6 ~i~psil-~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~----~~G------~----~~v~~ir~~~~~~~~~dvh 70 (228)
T 3ovp_A 6 KIGPSIL-NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNI----TFG------H----PVVESLRKQLGQDPFFDMH 70 (228)
T ss_dssp EEEEBCT-TSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCB----CBC------H----HHHHHHHHHHCSSSCEEEE
T ss_pred Eeeeehe-eCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccc----ccC------H----HHHHHHHHhhCCCCcEEEE
Confidence 4666886 45556677788889899999999854 34553 122 2 356666666 47899988
Q ss_pred ECCCCCChHHHHHHHHHcCCCEEEEecCCcc--------------cccccc------cCCCCCCC----CCCCCccCCCC
Q 014581 225 MTPNITDITEPARVALRSGSEGVSAINTIMS--------------VMGIDL------KTLRPEPC----VEGYSTPGGYS 280 (422)
Q Consensus 225 l~~~~~~~~~~a~~l~~aGadgi~v~n~~~~--------------~~~id~------e~~~p~~~----~~~~~~~gG~s 280 (422)
+-. .++...++.+.++|+|.|+++.-... ..++.+ +..++... +.-.+..-|+.
T Consensus 71 Lmv--~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~ 148 (228)
T 3ovp_A 71 MMV--SKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFG 148 (228)
T ss_dssp EEC--SCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTC
T ss_pred EEe--CCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCC
Confidence 764 35556777888899999988742110 011111 11111110 00001234566
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHHHHH
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELKDFM 358 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~~~m 358 (422)
|...-|..++.|+++++... +++|...|||. ++.+.+++.+|||.+.+||+++.. .| ..++++++.+++++
T Consensus 149 Gq~f~~~~l~ki~~lr~~~~------~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 149 GQKFMEDMMPKVHWLRTQFP------SLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAA 221 (228)
T ss_dssp SCCCCGGGHHHHHHHHHHCT------TCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHhcC------CCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 76666888888999988653 68999999995 899999999999999999999864 13 45788888888887
Q ss_pred HHcCC
Q 014581 359 KMHNF 363 (422)
Q Consensus 359 ~~~G~ 363 (422)
.+.+.
T Consensus 222 ~~~~~ 226 (228)
T 3ovp_A 222 QKRSL 226 (228)
T ss_dssp HHC--
T ss_pred hhccc
Confidence 76644
No 96
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.97 E-value=3e-09 Score=101.44 Aligned_cols=164 Identities=12% Similarity=0.053 Sum_probs=107.3
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccC-----hhHHHHHHHHHh
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD-----CRLLEEVCGWIN 214 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~-----~~~v~~iv~~vr 214 (422)
++++.+.. ..|+. ++++... . ++.+.+ +|+|-+.++. ++..+ |+.++++++.+.
T Consensus 68 i~~i~~~~-~~pv~--vgGGir~--~-~~~~~l--~Ga~~Viigs-------------~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 68 AREALQES-PQFLQ--VGGGIND--T-NCLEWL--KWASKVIVTS-------------WLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp HHHHHHHS-TTTSE--EESSCCT--T-THHHHT--TTCSCEEECG-------------GGBCTTCCBCHHHHHHHHHHHC
T ss_pred HHHHHhcC-CceEE--EeCCCCH--H-HHHHHh--cCCCEEEECc-------------HHHhhcCCCCHHHHHHHHHHhC
Confidence 44555544 45655 4545432 2 444444 7999988763 22344 999999999986
Q ss_pred -hccCccEEEE----------ECCCCC----ChH-HHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCC
Q 014581 215 -AKATVPVWAK----------MTPNIT----DIT-EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278 (422)
Q Consensus 215 -~~~~iPv~vK----------l~~~~~----~~~-~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG 278 (422)
+..-+++-+| +...-. +.. ++++.+.+. ++.|++++.... |.
T Consensus 127 ~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~d---------------------G~ 184 (260)
T 2agk_A 127 KDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVE---------------------GL 184 (260)
T ss_dssp GGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC---------------------------
T ss_pred cCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccc---------------------cC
Confidence 4333344333 322111 345 899999999 999999865421 22
Q ss_pred CCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh--CCCEEEEhhHH-Hhhhh-HHHHHHHHHH
Q 014581 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL--GANTVQVCTGV-MMHGY-GLVKRLCEEL 354 (422)
Q Consensus 279 ~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a--GAd~V~vgtal-l~~Gp-~~i~~i~~~l 354 (422)
++|+ .++.++++++.++.. .++|||++|||.+.+|+.+++.. ||++|++||++ ++.|+ ..++++++.+
T Consensus 185 ~~G~-----d~eli~~l~~~~~~~---~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 185 CGGI-----DELLVSKLFEWTKDY---DDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWN 256 (260)
T ss_dssp -CCC-----CHHHHHHHHHHHTTC---SSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHH
T ss_pred cCCC-----CHHHHHHHHHhhccc---CCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHH
Confidence 3443 367788888876210 05999999999999999999987 99999999998 66667 7777665543
No 97
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.97 E-value=7.5e-09 Score=96.75 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=85.2
Q ss_pred HHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCC
Q 014581 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSE 245 (422)
Q Consensus 167 ~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGad 245 (422)
+.++.+.++|+|.|.++...-... +.+.+.++++.+++.. +.++++.+. . .+-++.+.++|+|
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~-----------~~~~~~~~i~~i~~~~~~~~v~~~~~----t-~~ea~~a~~~Gad 155 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRH-----------DGLDIASFIRQVKEKYPNQLLMADIS----T-FDEGLVAHQAGID 155 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCT-----------TCCCHHHHHHHHHHHCTTCEEEEECS----S-HHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEcccccCCC-----------CCccHHHHHHHHHHhCCCCeEEEeCC----C-HHHHHHHHHcCCC
Confidence 345667788999999986431100 0023567788887765 677877643 2 3447888999999
Q ss_pred EE--EEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHH
Q 014581 246 GV--SAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323 (422)
Q Consensus 246 gi--~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~ 323 (422)
.| ++++...+ + .+..+ ..++.++++++. ++||+++|||.|++|+.
T Consensus 156 ~i~~~v~g~~~~-------~-------------~~~~~-----~~~~~i~~~~~~--------~ipvia~GGI~s~~~~~ 202 (234)
T 1yxy_A 156 FVGTTLSGYTPY-------S-------------RQEAG-----PDVALIEALCKA--------GIAVIAEGKIHSPEEAK 202 (234)
T ss_dssp EEECTTTTSSTT-------S-------------CCSSS-----CCHHHHHHHHHT--------TCCEEEESCCCSHHHHH
T ss_pred EEeeeccccCCC-------C-------------cCCCC-----CCHHHHHHHHhC--------CCCEEEECCCCCHHHHH
Confidence 98 33332110 0 01111 124556666542 58999999999999999
Q ss_pred HHHHhCCCEEEEhhHHHh
Q 014581 324 EFILLGANTVQVCTGVMM 341 (422)
Q Consensus 324 ~~l~aGAd~V~vgtall~ 341 (422)
+++.+|||+|++||+++.
T Consensus 203 ~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 203 KINDLGVAGIVVGGAITR 220 (234)
T ss_dssp HHHTTCCSEEEECHHHHC
T ss_pred HHHHCCCCEEEEchHHhC
Confidence 999999999999999876
No 98
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.95 E-value=2.6e-09 Score=112.35 Aligned_cols=159 Identities=13% Similarity=0.063 Sum_probs=106.1
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccc-cccccccChhHHHHHHHHHhhccCccEE--EEEC----------------
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERK-MGAAVGQDCRLLEEVCGWINAKATVPVW--AKMT---------------- 226 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~-~G~~l~~~~~~v~~iv~~vr~~~~iPv~--vKl~---------------- 226 (422)
.+.++.+.++|||.|.||..|-.. +.+. -+.....+++.++++.+..-+. .+-+. +|-.
T Consensus 350 ~~~a~~~l~aGad~V~igt~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~g~~-~ivv~iD~~~~~~~~~~~~~~~~~~~~ 427 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDAVYA-AEKYYELGNRGDGTSPIETISKAYGAQ-AVVISVDPKRVYVNSQADTKNKVFETE 427 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHH-HHHHHHTTSCCCSCSHHHHHHHHHCGG-GEEEEECEEEEEESSGGGCSSCCEECS
T ss_pred HHHHHHHHHcCCCEEEECCHHhhC-chhhccccccccCHHHHHHHHHHhCCC-cEEEEEEcccccccccccccccccccc
Confidence 345666777899999999766210 0000 0112345788888888765321 11122 1210
Q ss_pred ----------------CCC-----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 227 ----------------PNI-----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 227 ----------------~~~-----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
-.+ .+..++++.+++.|++.|++++.... |-++|+
T Consensus 428 ~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~d---------------------G~~~G~--- 483 (555)
T 1jvn_A 428 YPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKD---------------------GSNSGY--- 483 (555)
T ss_dssp SCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGT---------------------TTCSCC---
T ss_pred ccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCC---------------------CCCCCC---
Confidence 001 12578999999999999987654321 222332
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHH-hCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL-LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~-aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
.++.++++++.+ ++|||++|||.+.+|+.+++. .||++|++||+++.. +..+++++ +++.++|+.
T Consensus 484 --d~~li~~l~~~~-------~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~-~~~~~e~~----~~l~~~gi~ 549 (555)
T 1jvn_A 484 --DLELIEHVKDAV-------KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRG-EFTVNDVK----EYLLEHGLK 549 (555)
T ss_dssp --CHHHHHHHHHHC-------SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTT-SCCHHHHH----HHHHHTTCC
T ss_pred --CHHHHHHHHHhC-------CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcC-CCCHHHHH----HHHHHCCCc
Confidence 267788888876 899999999999999999998 899999999999866 66565554 467777773
No 99
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.95 E-value=9.1e-09 Score=96.67 Aligned_cols=158 Identities=13% Similarity=0.069 Sum_probs=101.3
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.+++++ .. +.|++++=+ -.+.++.. .+.++|+|++-+.- ....+|+.+.++ +...+..-
T Consensus 65 ~i~~i~-~~-~ipvi~~Gg-i~~~~~~~----~~~~~Gad~V~lg~-------------~~l~~p~~~~~~-~~~g~~i~ 123 (241)
T 1qo2_A 65 VLEKLS-EF-AEHIQIGGG-IRSLDYAE----KLRKLGYRRQIVSS-------------KVLEDPSFLKSL-REIDVEPV 123 (241)
T ss_dssp HHHHGG-GG-GGGEEEESS-CCSHHHHH----HHHHTTCCEEEECH-------------HHHHCTTHHHHH-HTTTCEEE
T ss_pred HHHHHH-hc-CCcEEEECC-CCCHHHHH----HHHHCCCCEEEECc-------------hHhhChHHHHHH-HHcCCcEE
Confidence 345555 43 678887653 23455433 33347999996642 223456667666 55432111
Q ss_pred ccE-----EEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHH
Q 014581 219 VPV-----WAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289 (422)
Q Consensus 219 iPv-----~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al 289 (422)
+.+ .|++.... .+..++++.+.+.|++.|.++++... |.+.|+ .+
T Consensus 124 ~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~---------------------g~~~g~-----~~ 177 (241)
T 1qo2_A 124 FSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKD---------------------GTLQEH-----DF 177 (241)
T ss_dssp EEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHH---------------------HHTCCC-----CH
T ss_pred EEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeeccc---------------------ccCCcC-----CH
Confidence 112 22222111 14678899999999999998876421 111221 25
Q ss_pred HHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh-----C-CCEEEEhhHHHhhhhHHHHHHH
Q 014581 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL-----G-ANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 290 ~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a-----G-Ad~V~vgtall~~Gp~~i~~i~ 351 (422)
+.++++++.+ ++|||++|||.+++|+.+++.+ | |++|++||+++.. +.-+++++
T Consensus 178 ~~i~~l~~~~-------~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~-~~~~~~~~ 237 (241)
T 1qo2_A 178 SLTKKIAIEA-------EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG-ILTVEVMK 237 (241)
T ss_dssp HHHHHHHHHH-------TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT-SSCHHHHH
T ss_pred HHHHHHHHhc-------CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC-CCCHHHHH
Confidence 7778888876 7999999999999999999998 9 9999999999976 33334433
No 100
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.93 E-value=6.5e-09 Score=100.84 Aligned_cols=85 Identities=24% Similarity=0.149 Sum_probs=58.5
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCC-CCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHG-MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~-~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~ 229 (422)
-+|.++. . .+.|+.++++||++|-.. ||-. ......|.+.+.+++.+.++.++ +++||+.|..-.+
T Consensus 19 GvI~d~~---~----~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~a----v~iPV~~K~rig~ 85 (330)
T 2yzr_A 19 GVVMDVT---N----VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMDA----VSIPVMAKCRIGH 85 (330)
T ss_dssp SEEEEES---S----HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHHH----CSSCEEEEEETTC
T ss_pred CceeeCC---H----HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHHh----cCCCeEEEEeecc
Confidence 3666774 1 447888888999999432 2321 11223466788899988887654 5999999998654
Q ss_pred CChHHHHHHHHHcCCCEEEEec
Q 014581 230 TDITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n 251 (422)
..-++.+++.|+|.|..+.
T Consensus 86 ---~~e~qilea~GaD~Id~s~ 104 (330)
T 2yzr_A 86 ---TTEALVLEAIGVDMIDESE 104 (330)
T ss_dssp ---HHHHHHHHHTTCSEEEEET
T ss_pred ---hHHHHHHHHcCCCEEehhc
Confidence 3457888889999997553
No 101
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.90 E-value=1.8e-08 Score=92.76 Aligned_cols=166 Identities=15% Similarity=0.128 Sum_probs=102.3
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
+.|++.||. +.+.+++.+.++.+.+.|++.|++...+|.. + +.++.+++..++|+++.....
T Consensus 6 ~~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~----------------~-~~i~~i~~~~~~~l~vg~g~~ 67 (212)
T 2v82_A 6 KLPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNSPQW----------------E-QSIPAIVDAYGDKALIGAGTV 67 (212)
T ss_dssp SSCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTSTTH----------------H-HHHHHHHHHHTTTSEEEEECC
T ss_pred CCCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCChhH----------------H-HHHHHHHHhCCCCeEEEeccc
Confidence 568999997 6789999999999999999999998655431 1 233344444477888754332
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccc-c--CCCCCCCCCCC-----CccCCCCCCCcc---hhHHHHHHHHHH
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDL-K--TLRPEPCVEGY-----STPGGYSCKAVH---PIALGKVMSIAK 297 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~-e--~~~p~~~~~~~-----~~~gG~sG~~i~---p~al~~v~~i~~ 297 (422)
.+ .+.++.+.++|+|+|++...... -++. + .....++.... ....|...-.++ +..++.++++++
T Consensus 68 -~~-~~~i~~a~~~Gad~V~~~~~~~~--~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~ 143 (212)
T 2v82_A 68 -LK-PEQVDALARMGCQLIVTPNIHSE--VIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKA 143 (212)
T ss_dssp -CS-HHHHHHHHHTTCCEEECSSCCHH--HHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHT
T ss_pred -cC-HHHHHHHHHcCCCEEEeCCCCHH--HHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHH
Confidence 23 34678888999999974332110 0000 0 00000000000 000111100112 234566666665
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.++. ++||++.|||. .+++.+++.+||++|.+||+++..
T Consensus 144 ~~~~-----~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 144 VLPS-----DIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp TSCT-----TCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred hccC-----CCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 5421 49999999997 999999999999999999999864
No 102
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.89 E-value=9.3e-09 Score=120.81 Aligned_cols=199 Identities=11% Similarity=0.026 Sum_probs=131.6
Q ss_pred CCCceecCCC-CCCCHHHHHHHHHcC-CcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHH
Q 014581 57 PNPFVIGSGP-PGTNYTVMKRAFDEG-WGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLE 134 (422)
Q Consensus 57 ~nPi~~AAg~-~~~~~~~~~~~~~~G-~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e 134 (422)
+.||+.+.+. .+.+.+.+.+..++| +|.+. +.- .. +.+
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~-~~~-------------------------------~~--------~~e 628 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELA-GGG-------------------------------YF--------SAA 628 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEE-GGG-------------------------------CC--------SHH
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEc-cCC-------------------------------CC--------CHH
Confidence 3799999986 445788888888886 45332 210 00 146
Q ss_pred HHHHHHHHHHhhC-CCCeEEEEeCCCCCHHH---HHHHHHHHHHhCCCE--EEEccCCCCCCCccccccccccChhHHHH
Q 014581 135 TMLKEFKQLKALY-PDKILIASIMEEYNKAA---WEELIDRVEETGIDA--IEVNFSCPHGMPERKMGAAVGQDCRLLEE 208 (422)
Q Consensus 135 ~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~---~~~~a~~~~~aGaD~--iElN~scP~~~~~~~~G~~l~~~~~~v~~ 208 (422)
.+.++|+++++.. ++.|+.+|++- .++.. ..++++.+.+.|+.. +.+..+.|.. +...+
T Consensus 629 ~l~~~I~~~~~~t~~~~~~gvN~~~-~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~--------------~~~~~ 693 (2051)
T 2uv8_G 629 GMTAAIDSVVSQIEKGSTFGINLIY-VNPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSL--------------EVASE 693 (2051)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEEET-TCTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCH--------------HHHHH
T ss_pred HHHHHHHHHHHhcCCCCceEEEEee-cChhhhhhhHHHHHHHHHcCCCcceEEecCCCCch--------------hhHHH
Confidence 6667888888754 35899999873 33321 136777777778877 8887665531 22334
Q ss_pred HHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEE-EEecCCcccccccccCCCCCCCCCCCCccCCCCCC-Ccch
Q 014581 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGV-SAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK-AVHP 286 (422)
Q Consensus 209 iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi-~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~-~i~p 286 (422)
+++.+ +++++.+.+. .......+..+.++|+|++ ++.-+.. ..||+.|. .+..
T Consensus 694 ~i~~l----G~~vi~~~~~-~~~a~~~~~~~~~~g~d~~ii~~~~G~--------------------eaGGH~g~~d~~~ 748 (2051)
T 2uv8_G 694 YIETL----GLKYLGLKPG-SIDAISQVINIAKAHPNFPIALQWTGG--------------------RGGGHHSFEDAHT 748 (2051)
T ss_dssp HHHHS----CCSCEEECCC-SHHHHHHHHHHHHHSTTSCEEEEECCS--------------------SCSEECCSCCSSH
T ss_pred HHHHc----CCEEEEecCc-hHHHHHHHHHHHHhCCCceeEEEEEcc--------------------CcCCCCCcccccc
Confidence 44443 7887765433 2234456677888999994 3321110 13565553 2334
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHH-----------HhCCCEEEEhhHHHhh
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFI-----------LLGANTVQVCTGVMMH 342 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l-----------~aGAd~V~vgtall~~ 342 (422)
..+..+.++++.+ ++|||+.|||.+++++..+| .+|||+|||||.|+..
T Consensus 749 ~~l~l~~~v~~~~-------~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t 808 (2051)
T 2uv8_G 749 PMLQMYSKIRRHP-------NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIA 808 (2051)
T ss_dssp HHHHHHHHHTTCT-------TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTS
T ss_pred cHHHHHHHHHhcC-------CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhC
Confidence 4455667777665 89999999999999999999 8999999999999973
No 103
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.85 E-value=8.4e-08 Score=90.42 Aligned_cols=173 Identities=18% Similarity=0.202 Sum_probs=116.6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc----CCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEE
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF----SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAK 224 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~----scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vK 224 (422)
..+..||. ..+...+.+.+++++++|+|.+.+.+ ..||. .+| + ++++++|+.+ ++|+-+.
T Consensus 28 ~~i~pSil-saD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni----t~G------~----~~v~~lr~~~p~~~ldvH 92 (246)
T 3inp_A 28 IQINPSIL-SADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL----TFG------P----MVLKALRDYGITAGMDVH 92 (246)
T ss_dssp CEEEEBGG-GSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB----CCC------H----HHHHHHHHHTCCSCEEEE
T ss_pred Ceeehhhh-cCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch----hcC------H----HHHHHHHHhCCCCeEEEE
Confidence 35777886 44555667778888889999999965 34553 122 2 4677778777 8999998
Q ss_pred ECCCCCChHHHHHHHHHcCCCEEEEecCCcc--------------cccccccCCCCCCCCC----------CCCccCCCC
Q 014581 225 MTPNITDITEPARVALRSGSEGVSAINTIMS--------------VMGIDLKTLRPEPCVE----------GYSTPGGYS 280 (422)
Q Consensus 225 l~~~~~~~~~~a~~l~~aGadgi~v~n~~~~--------------~~~id~e~~~p~~~~~----------~~~~~gG~s 280 (422)
+-. .++...++.+.++|+|.|+++.-... ..++.+...+|..... -.+..-|+.
T Consensus 93 Lmv--~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfg 170 (246)
T 3inp_A 93 LMV--KPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFG 170 (246)
T ss_dssp EEC--SSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC-
T ss_pred Eee--CCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCC
Confidence 874 35677888899999999988742100 0122221111111100 001234566
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
|....|.+++.|+++++...+.. .+++|...|||. .+.+.++..+|||.+.+||+++..
T Consensus 171 GQ~fi~~~l~KI~~lr~~~~~~~--~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a 229 (246)
T 3inp_A 171 GQKFIPAMLDKAKEISKWISSTD--RDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS 229 (246)
T ss_dssp -CCCCTTHHHHHHHHHHHHHHHT--SCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS
T ss_pred CcccchHHHHHHHHHHHHHHhcC--CCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC
Confidence 76666888999999988764321 268999999998 789999999999999999999864
No 104
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.74 E-value=1.8e-07 Score=87.44 Aligned_cols=176 Identities=18% Similarity=0.181 Sum_probs=111.7
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~ 230 (422)
.++.||.. .+...+.+.++.++++|+|.+++.+---+..+ +...-.++++.+|+.+++|+.+-+-. .
T Consensus 6 ~i~psila-~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp----------~~~~g~~~v~~lr~~~~~~~~vhlmv--~ 72 (230)
T 1tqj_A 6 VVAPSILS-ADFSRLGEEIKAVDEAGADWIHVDVMDGRFVP----------NITIGPLIVDAIRPLTKKTLDVHLMI--V 72 (230)
T ss_dssp EEEEBGGG-SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS----------CBCBCHHHHHHHGGGCCSEEEEEEES--S
T ss_pred EEEEEeee-cCHhHHHHHHHHHHHcCCCEEEEEEEecCCCc----------chhhhHHHHHHHHhhcCCcEEEEEEc--c
Confidence 36788874 45667777888888899999999873111000 01111267778888777788754433 2
Q ss_pred ChHHHHHHHHHcCCCEEEEecC--Ccc--------------cccccc--cC----CCCCC-CCC---CCCccCCCCCCCc
Q 014581 231 DITEPARVALRSGSEGVSAINT--IMS--------------VMGIDL--KT----LRPEP-CVE---GYSTPGGYSCKAV 284 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~--~~~--------------~~~id~--e~----~~p~~-~~~---~~~~~gG~sG~~i 284 (422)
|..++++.+.++|+|+|+++.- ... ..++.+ .+ .++.. ... -.+...|..|...
T Consensus 73 dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~ 152 (230)
T 1tqj_A 73 EPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSF 152 (230)
T ss_dssp SGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CCC
T ss_pred CHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCccC
Confidence 4455678888999999988865 211 011222 11 11110 000 0022344445555
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.|..++.++++++...+. +.++||.+.|||.. +++.++..+|||.+.+||+++..
T Consensus 153 ~~~~~~~i~~lr~~~~~~--~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a 207 (230)
T 1tqj_A 153 IPEVLPKIRALRQMCDER--GLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNA 207 (230)
T ss_dssp CGGGHHHHHHHHHHHHHH--TCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTS
T ss_pred cHHHHHHHHHHHHHHHhc--CCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 577888899998876321 12699999999997 99999999999999999999975
No 105
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.72 E-value=5.3e-08 Score=92.63 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=103.4
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccC--hhHHHHHHHHHhhccCccEEEEECC---CCC-----
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD--CRLLEEVCGWINAKATVPVWAKMTP---NIT----- 230 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~--~~~v~~iv~~vr~~~~iPv~vKl~~---~~~----- 230 (422)
..++..+.++.+.++|.|+|.+. |. +-+ .+.+.++++++|+.+++|+++|.+| +..
T Consensus 51 ~~~~~~~~~~~~~~sGtDai~VG-S~-------------~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~~~ 116 (286)
T 3vk5_A 51 PVTEAVEKAAELTRLGFAAVLLA-ST-------------DYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVRG 116 (286)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE-CS-------------CCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCCTT
T ss_pred CcHHHHHHHHHHHhcCCCEEEEc-cC-------------CCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccccccC
Confidence 45667778888889999999987 41 123 4678999999999889999999883 211
Q ss_pred -------------ChHHHHHH---------H----HHcCCCEE----EEecCC-ccccccc-ccCCCCCCC-CCCCCccC
Q 014581 231 -------------DITEPARV---------A----LRSGSEGV----SAINTI-MSVMGID-LKTLRPEPC-VEGYSTPG 277 (422)
Q Consensus 231 -------------~~~~~a~~---------l----~~aGadgi----~v~n~~-~~~~~id-~e~~~p~~~-~~~~~~~g 277 (422)
+..-+... + ++.| .-| .+.|.. .+...+. .+...|... +..|...|
T Consensus 117 aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~g 195 (286)
T 3vk5_A 117 ADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVA 195 (286)
T ss_dssp CSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHH
Confidence 22111111 2 3444 211 122221 1100000 000011100 00000000
Q ss_pred C--------CCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhh-hHHHH
Q 014581 278 G--------YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG-YGLVK 348 (422)
Q Consensus 278 G--------~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~G-p~~i~ 348 (422)
- +.+.. ++...+.|+++++.+.. ++||+..|||+|.+|+.+++.+|||.|.+||+++.++ |.+++
T Consensus 196 ad~G~~lV~LD~~~-~~v~~e~V~~I~~~~~~-----~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~ 269 (286)
T 3vk5_A 196 RAFGFHMVYLYSRN-EHVPPEVVRHFRKGLGP-----DQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALA 269 (286)
T ss_dssp HHTTCSEEEEECSS-SCCCHHHHHHHHHHSCT-----TCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHH
T ss_pred HHcCCCEEEEcCCC-CcCCHHHHHHHHHhcCC-----CCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHH
Confidence 0 01111 46667888888887621 5999999999999999999999999999999999875 45666
Q ss_pred HHHH
Q 014581 349 RLCE 352 (422)
Q Consensus 349 ~i~~ 352 (422)
++.+
T Consensus 270 e~a~ 273 (286)
T 3vk5_A 270 EIAG 273 (286)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 5543
No 106
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.72 E-value=1.4e-07 Score=89.08 Aligned_cols=181 Identities=17% Similarity=0.152 Sum_probs=106.5
Q ss_pred CCeEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccc-------cccc--ccChhHHHHHHHHHhhccC
Q 014581 149 DKILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM-------GAAV--GQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 149 ~~pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~-------G~~l--~~~~~~v~~iv~~vr~~~~ 218 (422)
..-++.-+..| .+.+.+.++++.++++|+|.|||.+ |.+++..+. -.++ +-+.+.+-++++.+|+.
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-- 88 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGV--AYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-- 88 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEEC--CCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--
Confidence 34577777544 5789999999999999999999997 443332210 0111 12445566666666653
Q ss_pred ccEEEEE--CCCCC-ChHHHHHHHHHcCCCEEEEecCCccc----------ccccc----------cCCCCCC-CCCCC-
Q 014581 219 VPVWAKM--TPNIT-DITEPARVALRSGSEGVSAINTIMSV----------MGIDL----------KTLRPEP-CVEGY- 273 (422)
Q Consensus 219 iPv~vKl--~~~~~-~~~~~a~~l~~aGadgi~v~n~~~~~----------~~id~----------e~~~p~~-~~~~~- 273 (422)
+|+++-. +|-+. ...++++.+.++|+||+++-.-.... .+++. ++.+... ...++
T Consensus 89 ~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFi 168 (252)
T 3tha_A 89 KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFI 168 (252)
T ss_dssp SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCE
T ss_pred CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeE
Confidence 7987632 11111 35678888999999998655321100 01110 0000000 00111
Q ss_pred --CccCCCCCCCc--chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 274 --STPGGYSCKAV--HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 274 --~~~gG~sG~~i--~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
...-|..|..- .....+.++++++.. ++||+..+||++++++.++.. +||+|.|||+++.
T Consensus 169 Y~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-------~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 169 YLLASIGITGTKSVEEAILQDKVKEIRSFT-------NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp EEECCSCSSSCSHHHHHHHHHHHHHHHTTC-------CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHhc-------CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 11224445321 111234455555543 799999999999999998765 7999999999986
No 107
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.72 E-value=8e-07 Score=82.78 Aligned_cols=151 Identities=15% Similarity=0.166 Sum_probs=101.2
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++++++.. +.|+.+-++. .+++.|. +.+.++|+|++.++.... .+.+.++++.+++. +
T Consensus 55 ~~~~lr~~~-~~~~~v~lmv-~d~~~~i---~~~~~agad~v~vH~~~~---------------~~~~~~~~~~i~~~-g 113 (228)
T 1h1y_A 55 VIQSLRKHT-KAYLDCHLMV-TNPSDYV---EPLAKAGASGFTFHIEVS---------------RDNWQELIQSIKAK-G 113 (228)
T ss_dssp HHHHHHTTC-CSEEEEEEES-SCGGGGH---HHHHHHTCSEEEEEGGGC---------------TTTHHHHHHHHHHT-T
T ss_pred HHHHHHhhc-CCcEEEEEEe-cCHHHHH---HHHHHcCCCEEEECCCCc---------------ccHHHHHHHHHHHc-C
Confidence 345555544 5688888873 5665553 444457999999985321 11224566666654 6
Q ss_pred ccEEEEECCCCCChHHHHHHHHHc--CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRS--GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~a--Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
+.+++-+.|.. ..+..+.+.+. ++|.|.+....+ |.+|....+..++.+++++
T Consensus 114 ~~igv~~~p~t--~~e~~~~~~~~~~~~d~vl~~sv~p-----------------------g~~g~~~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 114 MRPGVSLRPGT--PVEEVFPLVEAENPVELVLVMTVEP-----------------------GFGGQKFMPEMMEKVRALR 168 (228)
T ss_dssp CEEEEEECTTS--CGGGGHHHHHSSSCCSEEEEESSCT-----------------------TCSSCCCCGGGHHHHHHHH
T ss_pred CCEEEEEeCCC--CHHHHHHHHhcCCCCCEEEEEeecC-----------------------CCCcccCCHHHHHHHHHHH
Confidence 77888776652 23344555565 899886643221 1112223356677788888
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+... ++||++.|||.. +++.+++.+|||.+.+||+++..
T Consensus 169 ~~~~------~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 169 KKYP------SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp HHCT------TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred HhcC------CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 8652 689999999986 89999999999999999999975
No 108
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.70 E-value=3.3e-07 Score=85.31 Aligned_cols=172 Identities=19% Similarity=0.216 Sum_probs=110.2
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEEC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~ 226 (422)
-++.+|. ..+...+.+.++.+.+.|+|.+++.+. .|+. + .. .++++++++.++.|+.+-+-
T Consensus 12 ~i~p~i~-a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~---~-------~~----~~~i~~l~~~~~~~~~v~l~ 76 (230)
T 1rpx_A 12 IVSPSIL-SANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI---T-------IG----PLVVDSLRPITDLPLDVHLM 76 (230)
T ss_dssp EEEEBGG-GSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB---C-------CC----HHHHHHHGGGCCSCEEEEEE
T ss_pred EEEEEee-cCCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc---c-------cC----HHHHHHHHhccCCcEEEEEE
Confidence 3667776 345667788888888899999999751 2221 1 11 24566677766667666543
Q ss_pred CCCCChHHHHHHHHHcCCCEEEEecC--Cccc----------c----cccc------cCCCCCC-CCCCC---CccCCCC
Q 014581 227 PNITDITEPARVALRSGSEGVSAINT--IMSV----------M----GIDL------KTLRPEP-CVEGY---STPGGYS 280 (422)
Q Consensus 227 ~~~~~~~~~a~~l~~aGadgi~v~n~--~~~~----------~----~id~------e~~~p~~-~~~~~---~~~gG~s 280 (422)
+.+..+.++.+.++|+|+|+++.. .... . ++.+ +..+... ..... +...|+.
T Consensus 77 --vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~ 154 (230)
T 1rpx_A 77 --IVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFG 154 (230)
T ss_dssp --SSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCS
T ss_pred --ecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCC
Confidence 334556788889999999998876 2110 0 1111 1111110 00100 1123556
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
|....+..++.++++++.+... ..++||++.|||. ++++.+++.+||++|-+||+++..
T Consensus 155 g~~~~~~~~~~i~~l~~~~~~~--~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 155 GQSFIESQVKKISDLRKICAER--GLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp SCCCCTTHHHHHHHHHHHHHHH--TCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred CccccHHHHHHHHHHHHHHHhc--CCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCC
Confidence 6655566677777787765311 0168999999998 899999999999999999999875
No 109
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.69 E-value=2.4e-07 Score=88.43 Aligned_cols=147 Identities=18% Similarity=0.239 Sum_probs=94.1
Q ss_pred HHHHHHHHhCCCEE--EEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC-------C--CChHHH
Q 014581 167 ELIDRVEETGIDAI--EVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN-------I--TDITEP 235 (422)
Q Consensus 167 ~~a~~~~~aGaD~i--ElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~-------~--~~~~~~ 235 (422)
+.++.+.++|+|.| .+|.+|+.. . ...+.++++++..++ .++|+++.+.++ . .++.+.
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~---~-------~~~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~~~~~~~ 171 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDED---W-------EAYRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNERDPELVAHA 171 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTH---H-------HHHHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCH---H-------HHHHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCHhHHHHH
Confidence 34556667899999 777766531 0 111334455554443 388999886211 1 123455
Q ss_pred HHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecC
Q 014581 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GG 315 (422)
++.+.+.|+|.|.+... . .++.++++++.+ ++||++.||
T Consensus 172 a~~a~~~Gad~i~~~~~------------------------~----------~~~~l~~i~~~~-------~ipvva~GG 210 (273)
T 2qjg_A 172 ARLGAELGADIVKTSYT------------------------G----------DIDSFRDVVKGC-------PAPVVVAGG 210 (273)
T ss_dssp HHHHHHTTCSEEEECCC------------------------S----------SHHHHHHHHHHC-------SSCEEEECC
T ss_pred HHHHHHcCCCEEEECCC------------------------C----------CHHHHHHHHHhC-------CCCEEEEeC
Confidence 68899999998865521 0 135566777665 799999999
Q ss_pred CCC--HHH----HHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCCCHHHh
Q 014581 316 VET--GGD----AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369 (422)
Q Consensus 316 I~s--~~d----a~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~si~d~ 369 (422)
|.+ .+| +.+++.+||++|.++|+++.. ++. .+..+++.+.+.+. .+++|.
T Consensus 211 i~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~-~~~-~~~~~~l~~~~~~~--~~~~~~ 266 (273)
T 2qjg_A 211 PKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH-DDV-VGITRAVCKIVHEN--ADVEEA 266 (273)
T ss_dssp SCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS-SSH-HHHHHHHHHHHHHC--CCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC-CCH-HHHHHHHHHHHhcC--CCHHHH
Confidence 994 888 455557999999999999976 443 34445555555432 455555
No 110
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.69 E-value=3.6e-07 Score=84.94 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
..+.|+++++.+. ++||+..|||++++++.+++ .|||.|.+||++..+ |.+++++.+.++
T Consensus 167 ~~~~i~~i~~~~~------~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~-p~~~~~~v~a~~ 226 (228)
T 3vzx_A 167 DIEAVKKTKAVLE------TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYED-FDRALKTVAAVK 226 (228)
T ss_dssp CHHHHHHHHHHCS------SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHC-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcC------CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcC-HHHHHHHHHHHh
Confidence 4677888888752 59999999999999999998 799999999999987 999998887764
No 111
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.68 E-value=7.6e-08 Score=88.58 Aligned_cols=147 Identities=20% Similarity=0.212 Sum_probs=95.7
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC----------cccc---------------ccccccChh
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP----------ERKM---------------GAAVGQDCR 204 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~----------~~~~---------------G~~l~~~~~ 204 (422)
.|+++.+. ..+.+++.+.++.+.+.|++.||+.+.+|+... ..++ |+.+...+.
T Consensus 13 ~~ii~vi~-~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 13 SRLLPLLT-VRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp HCEEEEEC-CCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEESS
T ss_pred CCEEEEEe-CCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC
Confidence 47888886 456777888999998889999999988775310 0011 111111111
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
.-.++++..++ .++|++.- ..+..+ +..+.+.|+|+|.++. . ...||
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G----~~t~~e-~~~A~~~Gad~v~~fp---a------------------~~~gG------ 138 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPG----VLTPTE-VERALALGLSALKFFP---A------------------EPFQG------ 138 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEE----ECSHHH-HHHHHHTTCCEEEETT---T------------------TTTTH------
T ss_pred CCHHHHHHHHH-hCCCEEec----CCCHHH-HHHHHHCCCCEEEEec---C------------------ccccC------
Confidence 12233333333 35666543 223333 4566778888887632 1 01122
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
+..++.+++.++ ++|+++.|||. .+++.+++.+||++|.++|+++.
T Consensus 139 ----~~~lk~l~~~~~------~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 139 ----VRVLRAYAEVFP------EVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp ----HHHHHHHHHHCT------TCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred ----HHHHHHHHhhCC------CCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 355677777663 79999999997 79999999999999999999886
No 112
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.67 E-value=3.7e-07 Score=84.51 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
.++.+.++++.+.+ +.+++++= .. +.+.++|+|++.+. ... .+ +.++.
T Consensus 64 ~~~~~~l~~~~~~~-~v~v~v~~----~~-------~~a~~~gad~v~l~----~~~------------~~-~~~~~--- 111 (227)
T 2tps_A 64 IKFAEKAQAACREA-GVPFIVND----DV-------ELALNLKADGIHIG----QED------------AN-AKEVR--- 111 (227)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEES----CH-------HHHHHHTCSEEEEC----TTS------------SC-HHHHH---
T ss_pred HHHHHHHHHHHHHc-CCeEEEcC----HH-------HHHHHcCCCEEEEC----CCc------------cC-HHHHH---
Confidence 34445555544433 56787751 12 23456799999763 210 01 22222
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
+.... +++.+++. +..+ ++.+.+.|+|+|.+...+.. .+ ..+. + .+..++.++
T Consensus 112 -~~~g~-~~~~~s~~--t~~e-~~~a~~~g~d~v~~~~v~~t------~~------------~~~~-~---~~~~~~~l~ 164 (227)
T 2tps_A 112 -AAIGD-MILGVSAH--TMSE-VKQAEEDGADYVGLGPIYPT------ET------------KKDT-R---AVQGVSLIE 164 (227)
T ss_dssp -HHHTT-SEEEEEEC--SHHH-HHHHHHHTCSEEEECCSSCC------CS------------SSSC-C---CCCTTHHHH
T ss_pred -HhcCC-cEEEEecC--CHHH-HHHHHhCCCCEEEECCCcCC------CC------------CCCC-C---CccCHHHHH
Confidence 22233 45555542 4444 66778899999987422111 00 0010 1 123356677
Q ss_pred HHHHHhhccCCCCC-ceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHHHH
Q 014581 294 SIAKMMKSEFNDKD-YSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELKDF 357 (422)
Q Consensus 294 ~i~~~~~~~~~~~~-ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~~~ 357 (422)
++++.+ + +||++.|||. ++++.+++.+||++|.+||+++.. .| ..++++.+.++.+
T Consensus 165 ~~~~~~-------~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 165 AVRRQG-------ISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTY 223 (227)
T ss_dssp HHHHTT-------CCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHhC-------CCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHhc
Confidence 777655 5 9999999999 999999999999999999999863 24 5566666655544
No 113
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.67 E-value=6e-07 Score=83.85 Aligned_cols=133 Identities=16% Similarity=0.173 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEEC---CCCCC--hHHHH
Q 014581 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT---PNITD--ITEPA 236 (422)
Q Consensus 162 ~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~---~~~~~--~~~~a 236 (422)
.+.-..-++.+.+.|||.|++.+. +|.-...+.+.+.+-++++++.++- ..+|+- ..+++ +...+
T Consensus 94 ~~~Kv~Ea~~Ai~~GAdEIDmViN---------ig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~ 163 (239)
T 3ngj_A 94 SEVKAYETKVAVEQGAEEVDMVIN---------IGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVC 163 (239)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCEEEEEee---------hHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHH
Confidence 333333445555669999998752 1222234566677777777777642 244532 22332 45666
Q ss_pred HHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCC
Q 014581 237 RVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGV 316 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI 316 (422)
+.+.++|+|+|..+..+. .+|- +++.|+.+++.+.. +++|.++|||
T Consensus 164 ~ia~~aGADfVKTSTGf~---------------------~ggA--------t~~dv~lmr~~vg~-----~v~VKasGGI 209 (239)
T 3ngj_A 164 KRCVAAGAEYVKTSTGFG---------------------THGA--------TPEDVKLMKDTVGD-----KALVKAAGGI 209 (239)
T ss_dssp HHHHHHTCSEEECCCSSS---------------------SCCC--------CHHHHHHHHHHHGG-----GSEEEEESSC
T ss_pred HHHHHHCcCEEECCCCCC---------------------CCCC--------CHHHHHHHHHhhCC-----CceEEEeCCC
Confidence 778899999996442221 1221 24556667777643 7999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEhhH
Q 014581 317 ETGGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 317 ~s~~da~~~l~aGAd~V~vgta 338 (422)
++.+|+++++.+||+-+...++
T Consensus 210 rt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 210 RTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp CSHHHHHHHHHTTEEEEEESCH
T ss_pred CCHHHHHHHHHhcccceecccH
Confidence 9999999999999997776654
No 114
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.67 E-value=8.7e-07 Score=84.84 Aligned_cols=145 Identities=16% Similarity=0.154 Sum_probs=94.2
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++.+++.. +.|++..=. ..++.. +..+..+|||+|-|.... -+.+.+.++++..++ .+
T Consensus 104 ~l~~ir~~v-~lPvl~kdf-iid~~q----v~~A~~~GAD~VlLi~a~--------------l~~~~l~~l~~~a~~-lG 162 (272)
T 3qja_A 104 DLDAVRASV-SIPVLRKDF-VVQPYQ----IHEARAHGADMLLLIVAA--------------LEQSVLVSMLDRTES-LG 162 (272)
T ss_dssp HHHHHHHHC-SSCEEEESC-CCSHHH----HHHHHHTTCSEEEEEGGG--------------SCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHhC-CCCEEECcc-ccCHHH----HHHHHHcCCCEEEEeccc--------------CCHHHHHHHHHHHHH-CC
Confidence 344555544 789884321 223322 233445799999886431 123456667766655 37
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
..+++-+. +..+ ++.+.+.|+|.|.+.|+... +..+ .++.+.++++.
T Consensus 163 l~~lvev~----t~ee-~~~A~~~Gad~IGv~~r~l~-------~~~~---------------------dl~~~~~l~~~ 209 (272)
T 3qja_A 163 MTALVEVH----TEQE-ADRALKAGAKVIGVNARDLM-------TLDV---------------------DRDCFARIAPG 209 (272)
T ss_dssp CEEEEEES----SHHH-HHHHHHHTCSEEEEESBCTT-------TCCB---------------------CTTHHHHHGGG
T ss_pred CcEEEEcC----CHHH-HHHHHHCCCCEEEECCCccc-------cccc---------------------CHHHHHHHHHh
Confidence 77776542 3444 55667889999988765321 1110 11234456555
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++. ++|+++.|||.+++|+.+++.+||++|.||++++..
T Consensus 210 v~~-----~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 210 LPS-----SVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp SCT-----TSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred Ccc-----cCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 532 699999999999999999999999999999999976
No 115
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.64 E-value=1.4e-06 Score=79.54 Aligned_cols=149 Identities=18% Similarity=0.119 Sum_probs=95.6
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCC-HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc
Q 014581 139 EFKQLKALYPDKILIASIMEEYN-KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~-~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~ 217 (422)
.++.+++.+|+.|+++-++ .++ ++.+ ++.+.++|+|++-++... ..+.+.++++.+++.
T Consensus 43 ~i~~l~~~~~~~~i~~~l~-~~di~~~~---~~~a~~~Gad~v~vh~~~---------------~~~~~~~~~~~~~~~- 102 (207)
T 3ajx_A 43 VITAVKKAHPDKIVFADMK-TMDAGELE---ADIAFKAGADLVTVLGSA---------------DDSTIAGAVKAAQAH- 102 (207)
T ss_dssp HHHHHHHHSTTSEEEEEEE-ECSCHHHH---HHHHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHH-
T ss_pred HHHHHHHhCCCCeEEEEEE-ecCccHHH---HHHHHhCCCCEEEEeccC---------------ChHHHHHHHHHHHHc-
Confidence 3556666666789998776 345 5553 456667899999988531 123355566666553
Q ss_pred CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 218 ~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
+.++.+-+. ..++..+.++.+.+.|+|.|.++-.... ...|. .+.. +.++++++
T Consensus 103 g~~~gv~~~-s~~~p~~~~~~~~~~g~d~v~~~~~~~~-------------------~~~g~-----~~~~-~~i~~~~~ 156 (207)
T 3ajx_A 103 NKGVVVDLI-GIEDKATRAQEVRALGAKFVEMHAGLDE-------------------QAKPG-----FDLN-GLLAAGEK 156 (207)
T ss_dssp TCEEEEECT-TCSSHHHHHHHHHHTTCSEEEEECCHHH-------------------HTSTT-----CCTH-HHHHHHHH
T ss_pred CCceEEEEe-cCCChHHHHHHHHHhCCCEEEEEecccc-------------------cccCC-----CchH-HHHHHhhC
Confidence 555655443 2234455567777889999855532211 01111 1222 44444433
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
. ++||++.|||. ++++.+++.+|||+|.+||+++..
T Consensus 157 ~--------~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 157 A--------RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp H--------TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHTS
T ss_pred C--------CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccCC
Confidence 2 48999999998 889999999999999999999875
No 116
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.64 E-value=1.7e-06 Score=82.65 Aligned_cols=144 Identities=18% Similarity=0.152 Sum_probs=96.8
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++.. +.||+..=+ -.++.+ +..+..+|||+|-|+..+- +.+.++++++..++. +.
T Consensus 112 L~~ir~~v-~lPVl~Kdf-i~d~~q----i~ea~~~GAD~VlLi~a~L--------------~~~~l~~l~~~a~~l-Gl 170 (272)
T 3tsm_A 112 LTAARQAC-SLPALRKDF-LFDPYQ----VYEARSWGADCILIIMASV--------------DDDLAKELEDTAFAL-GM 170 (272)
T ss_dssp HHHHHHTS-SSCEEEESC-CCSTHH----HHHHHHTTCSEEEEETTTS--------------CHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhc-CCCEEECCc-cCCHHH----HHHHHHcCCCEEEEccccc--------------CHHHHHHHHHHHHHc-CC
Confidence 34455544 789875432 123322 2334567999999986421 235577777776664 66
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
-++|-+. +.. -++.+.+.|++.|-+.|+.. .++++ .+....++.+.+
T Consensus 171 ~~lvevh----~~e-El~~A~~~ga~iIGinnr~l-------~t~~~---------------------dl~~~~~L~~~i 217 (272)
T 3tsm_A 171 DALIEVH----DEA-EMERALKLSSRLLGVNNRNL-------RSFEV---------------------NLAVSERLAKMA 217 (272)
T ss_dssp EEEEEEC----SHH-HHHHHTTSCCSEEEEECBCT-------TTCCB---------------------CTHHHHHHHHHS
T ss_pred eEEEEeC----CHH-HHHHHHhcCCCEEEECCCCC-------ccCCC---------------------ChHHHHHHHHhC
Confidence 6666553 334 45777899999887776532 12111 123445666666
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+. ++|+|+-|||.+++|+.++..+||++|-||++++..
T Consensus 218 p~-----~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 218 PS-----DRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp CT-----TSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred CC-----CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 53 799999999999999999999999999999999986
No 117
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.62 E-value=6.8e-07 Score=82.62 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=82.2
Q ss_pred HHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEE
Q 014581 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249 (422)
Q Consensus 170 ~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v 249 (422)
+.+.++|+|++.++.... ..+.+ +.++. ++.+.+-+ .+ .+-++.+.+.|+|+|.+
T Consensus 82 ~~a~~~gad~v~l~~~~~--------------~~~~~----~~~~~--~~~ig~sv----~t-~~~~~~a~~~gaD~i~~ 136 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGSF--------------SPKQI----RARFP--HLHIGRSV----HS-LEEAVQAEKEDADYVLF 136 (221)
T ss_dssp HHHHTTTCCEEEECTTSC--------------CHHHH----HHHCT--TCEEEEEE----CS-HHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEeCCCcc--------------CHHHH----HHHCC--CCEEEEEc----CC-HHHHHHHHhCCCCEEEE
Confidence 335567999998873211 11222 22222 34444433 23 34467788999999987
Q ss_pred ecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC
Q 014581 250 INTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG 329 (422)
Q Consensus 250 ~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG 329 (422)
.+.+... + ..|+ .+..++.++++++.+ ++||++.||| +++++.+++.+|
T Consensus 137 ~~~f~~~------~-----------~~g~------~~~~~~~l~~~~~~~-------~~pvia~GGI-~~~nv~~~~~~G 185 (221)
T 1yad_A 137 GHVFETD------C-----------KKGL------EGRGVSLLSDIKQRI-------SIPVIAIGGM-TPDRLRDVKQAG 185 (221)
T ss_dssp ECCC---------------------------------CHHHHHHHHHHHC-------CSCEEEESSC-CGGGHHHHHHTT
T ss_pred CCccccC------C-----------CCCC------CCCCHHHHHHHHHhC-------CCCEEEECCC-CHHHHHHHHHcC
Confidence 6543210 0 0111 145567777777664 7999999999 899999999999
Q ss_pred CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 330 ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 330 Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
|++|.++|+++.. ++ +.+..+++.+.+.+.++
T Consensus 186 a~gv~vgs~i~~~-~d-~~~~~~~~~~~~~~~~~ 217 (221)
T 1yad_A 186 ADGIAVMSGIFSS-AE-PLEAARRYSRKLKEMRY 217 (221)
T ss_dssp CSEEEESHHHHTS-SS-HHHHHHHHHHHHHHHC-
T ss_pred CCEEEEhHHhhCC-CC-HHHHHHHHHHHHHHhhh
Confidence 9999999999975 33 22233333444444444
No 118
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.61 E-value=5.7e-06 Score=79.88 Aligned_cols=205 Identities=9% Similarity=0.072 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+++.... ....|++..+.+ ++++++..++.+.+..
T Consensus 25 ~D~~sA~~~~~aG~~ai~vs~~~~a-----------------------~~~~G~pD~~~v---t~~em~~~~~~I~~~~- 77 (295)
T 1xg4_A 25 INANHALLAQRAGYQAIYLSGGGVA-----------------------AGSLGLPDLGIS---TLDDVLTDIRRITDVC- 77 (295)
T ss_dssp SSHHHHHHHHHTTCSCEEECHHHHH-----------------------HTTTCCCSSSCS---CHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHcCCCEEEECchHhh-----------------------hhhcCCCCCCCC---CHHHHHHHHHHHHhhC-
Confidence 3566677778899988877654210 012455554433 3889999888888765
Q ss_pred CCeEEEEeCCCC--CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIMEEY--NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~~~--~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.||++-+-.++ +++...+.+++++++|+++|.|+=.+ |....+ ..|..+....+.+.+|...+......++.|.-
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH-~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~a 156 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGH-RPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMA 156 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTT-SSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEE
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCC-CCCCccCCHHHHHHHHHHHHHhccCCCcEEEE
Confidence 689999985454 68888899999999999999998665 221111 11233444445555555444444355555555
Q ss_pred CCCC------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 226 TPNI------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 226 ~~~~------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
+.+. .+..+-++++.++|||.|.+.... +.+.++++.+.+
T Consensus 157 Rtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~----------------------------------~~~~~~~i~~~~ 202 (295)
T 1xg4_A 157 RTDALAVEGLDAAIERAQAYVEAGAEMLFPEAIT----------------------------------ELAMYRQFADAV 202 (295)
T ss_dssp EECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCC----------------------------------SHHHHHHHHHHH
T ss_pred ecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCC----------------------------------CHHHHHHHHHHc
Confidence 4331 235566788999999999766421 124566787777
Q ss_pred hccCCCCCceEEEecCC---CCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 300 KSEFNDKDYSLSGIGGV---ETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI---~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++|++++.-. ...-+..+.-.+|.+.|.++..++..
T Consensus 203 -------~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 203 -------QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp -------CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHH
T ss_pred -------CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHH
Confidence 7898876533 21223456667999999999998865
No 119
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.59 E-value=8.8e-07 Score=81.92 Aligned_cols=151 Identities=16% Similarity=0.100 Sum_probs=94.5
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++.+++.+++.|++.-+.-...++. .++.+.++|+|++-++...+ .+.+.++++.+++. +
T Consensus 49 ~i~~lr~~~~~~~i~ld~~l~d~p~~---~~~~~~~aGad~i~vh~~~~---------------~~~~~~~~~~~~~~-g 109 (218)
T 3jr2_A 49 AVSTLRHNHPNHILVCDMKTTDGGAI---LSRMAFEAGADWITVSAAAH---------------IATIAACKKVADEL-N 109 (218)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHHTCSEEEEETTSC---------------HHHHHHHHHHHHHH-T
T ss_pred HHHHHHHhCCCCcEEEEEeecccHHH---HHHHHHhcCCCEEEEecCCC---------------HHHHHHHHHHHHHh-C
Confidence 45666766667777754431123444 45667788999999885321 13456677777665 5
Q ss_pred ccEEEE-ECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 219 VPVWAK-MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 219 iPv~vK-l~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
++..+. +.+ ... +-++.+.+.|+|.++++-+. +.. .+| ...-+..++.+++++.
T Consensus 110 ~~~~~d~l~~--~T~-~~~~~~~~~g~d~v~~~~~~------~~~-------------~~g---~~~~~~~l~~i~~~~~ 164 (218)
T 3jr2_A 110 GEIQIEIYGN--WTM-QDAKAWVDLGITQAIYHRSR------DAE-------------LAG---IGWTTDDLDKMRQLSA 164 (218)
T ss_dssp CEEEEECCSS--CCH-HHHHHHHHTTCCEEEEECCH------HHH-------------HHT---CCSCHHHHHHHHHHHH
T ss_pred Cccceeeeec--CCH-HHHHHHHHcCccceeeeecc------ccc-------------cCC---CcCCHHHHHHHHHHhC
Confidence 555543 233 233 45666777899988764221 100 011 1111334444444432
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.++||++.||| +++++.+++.+|||.|.+||+++..
T Consensus 165 --------~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 165 --------LGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp --------TTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred --------CCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC
Confidence 17999999999 5999999999999999999999864
No 120
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.58 E-value=3.1e-07 Score=86.47 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=75.5
Q ss_pred EEEEECCCCC----ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 221 VWAKMTPNIT----DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 221 v~vKl~~~~~----~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
..||+..... +..++++.+.++|++.|.+++.... +... +..++.+++++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~---------------------~~~~-----~~~~~~i~~i~ 75 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKS-----GYDTEMIRFVR 75 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTT---------------------TCSS-----CCCHHHHHHHG
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcc---------------------cCCC-----cccHHHHHHHH
Confidence 4566654322 4689999999999999988753211 0011 11246677777
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
+.+ ++||+++|||.+++|+.+++.+|||.|.+||+++.+ |+++.++.+.+
T Consensus 76 ~~~-------~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d-p~~~~~~~~~~ 125 (247)
T 3tdn_A 76 PLT-------TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN-PSLITQIAQTF 125 (247)
T ss_dssp GGC-------CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC-THHHHHHHHHH
T ss_pred HhC-------CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC-hHHHHHHHHHh
Confidence 665 799999999999999999999999999999999988 88877776654
No 121
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.58 E-value=1.4e-06 Score=80.19 Aligned_cols=172 Identities=17% Similarity=0.234 Sum_probs=105.4
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc--CC-CCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNF--SC-PHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 152 vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~--sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
+..||. ..+...+.+.++.+++.|+|.+++.+ +. +.. +...+ ++++++++.++.|+.+-+--
T Consensus 6 ~~~~i~-a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~---------~~~g~----~~i~~i~~~~~~~~~v~l~v- 70 (220)
T 2fli_A 6 IAPSIL-AADYANFASELARIEETDAEYVHIDIMDGQFVPN---------ISFGA----DVVASMRKHSKLVFDCHLMV- 70 (220)
T ss_dssp EEEBGG-GSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSC---------BCBCH----HHHHHHHTTCCSEEEEEEES-
T ss_pred EEEEEE-eCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCc---------cccCH----HHHHHHHHhCCCCEEEEEee-
Confidence 556776 34566778888889899999988875 22 110 11113 34555666666676654322
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCccc--------------ccccc--cC----CCCC-CCCCCC---CccCCCCCCCc
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSV--------------MGIDL--KT----LRPE-PCVEGY---STPGGYSCKAV 284 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~--------------~~id~--e~----~~p~-~~~~~~---~~~gG~sG~~i 284 (422)
.+..+.++.+.++|+|+|+++...... ..+.+ .+ .+.. ...... +...|+.|...
T Consensus 71 -~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~ 149 (220)
T 2fli_A 71 -VDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAF 149 (220)
T ss_dssp -SSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCC
T ss_pred -cCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccccc
Confidence 244445588889999999987532110 01111 11 1110 000101 12235556544
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.|..++.++++++..... ..++||++.|||+ ++++.+++.+||++|-+||+++..
T Consensus 150 ~~~~~~~i~~~~~~~~~~--~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 150 IPECLEKVATVAKWRDEK--GLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp CGGGHHHHHHHHHHHHHT--TCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred CHHHHHHHHHHHHHHHhc--CCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 466666677777765311 0168999999999 899999999999999999999975
No 122
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.57 E-value=5.6e-07 Score=84.10 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
..+.|+++++.+. ++|++..|||++++++.+++. |||.|.+||++..+
T Consensus 177 ~~~~i~~i~~~~~------~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~ 224 (234)
T 2f6u_A 177 NPELVAEVKKVLD------KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEK 224 (234)
T ss_dssp CHHHHHHHHHHCS------SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHH
T ss_pred hHHHHHHHHHhCC------CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhC
Confidence 4577888888752 689999999999999999988 99999999999987
No 123
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.56 E-value=9.8e-08 Score=116.01 Aligned_cols=197 Identities=18% Similarity=0.283 Sum_probs=126.6
Q ss_pred CCCceecCCCCC-CCHHHHHHHHHcC-CcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHH
Q 014581 57 PNPFVIGSGPPG-TNYTVMKRAFDEG-WGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLE 134 (422)
Q Consensus 57 ~nPi~~AAg~~~-~~~~~~~~~~~~G-~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e 134 (422)
+.|||.+.+..+ .+.+.+.+..++| +|.+-.. |+.+ ++
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~--------------------------------g~~~--------~~ 466 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGG--------------------------------GQVT--------EQ 466 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECST--------------------------------TCCS--------HH
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCC--------------------------------CCCC--------HH
Confidence 889999887643 4678887777764 4544100 1111 45
Q ss_pred HHHHHHHHHHhhCC-CCeEEEEeCCCCCHHHH------HHHHHHHHHhC--CCEEEEccCCCCCCCccccccccccChhH
Q 014581 135 TMLKEFKQLKALYP-DKILIASIMEEYNKAAW------EELIDRVEETG--IDAIEVNFSCPHGMPERKMGAAVGQDCRL 205 (422)
Q Consensus 135 ~~l~~i~~~k~~~~-~~pvi~si~~~~~~~~~------~~~a~~~~~aG--aD~iElN~scP~~~~~~~~G~~l~~~~~~ 205 (422)
.+.++|+++++..+ +.|+.+|++ -.++..| .++++.+.+.| +|++.+.++.|. .+.
T Consensus 467 ~l~~~i~~~r~~~~~~~p~~vNl~-~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~--------------~ee 531 (3089)
T 3zen_D 467 IFNDRIAELETLLEPGRAIQFNTL-FLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD--------------LEE 531 (3089)
T ss_dssp HHHHHHHHHHHHSCTTCCCEEEEE-CSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC--------------HHH
T ss_pred HHHHHHHHHHHhcCCCCceeechh-hcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc--------------hhH
Confidence 66667777776543 678999987 3455332 35677777889 888998876663 134
Q ss_pred HHHHHHHHhhccCccEEE-EECCCCCChHHHHHHHHHcCCC------EEEEecCCcccccccccCCCCCCCCCCCCccCC
Q 014581 206 LEEVCGWINAKATVPVWA-KMTPNITDITEPARVALRSGSE------GVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~v-Kl~~~~~~~~~~a~~l~~aGad------gi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG 278 (422)
..++++.+++. .+.++. |. + ..+.++++.+.|+| +|++.+... ||
T Consensus 532 ~~~~i~~l~~~-Gi~~i~~~~-~----t~~~a~~~~~i~~d~~~~~y~vv~~G~ea----------------------GG 583 (3089)
T 3zen_D 532 AVDIIDELNEV-GISHVVFKP-G----TVEQIRSVIRIAAEVPTKPVIVHIEGGRA----------------------GG 583 (3089)
T ss_dssp HHHHHTSTTHH-HHCSEEECC-C----SHHHHHHHHHHHTTSTTSCEEEEECCSSS----------------------SE
T ss_pred hHHHHHHHHHc-CCEEEEEeC-C----CHHHHHHHHHhhhhcCCCcEEEEEeCCCc----------------------CC
Confidence 55666666654 444443 42 2 24556777788877 676665432 33
Q ss_pred CCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHH-----------HhCCCEEEEhhHHHhh
Q 014581 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFI-----------LLGANTVQVCTGVMMH 342 (422)
Q Consensus 279 ~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l-----------~aGAd~V~vgtall~~ 342 (422)
+.|.. .....|......+.+. .++|||+.|||.+++++.+++ .+|||+|||||+++.-
T Consensus 584 H~g~~---~~~~ll~~~~~~ir~~---~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 584 HHSWE---DLDDLLLATYSELRSR---SNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp ECCSC---CHHHHHHHHHHHHTTC---TTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred CCCcc---cHHHHHHHHHHHHhhc---CCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 33321 1122332222332221 289999999999999999999 9999999999999863
No 124
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.55 E-value=8.9e-07 Score=83.06 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=96.1
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC------C--------CC-
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP------N--------IT- 230 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~------~--------~~- 230 (422)
.+.++.+.++|+|+||+.++ + +-+.+.+.++++++|+ +++|+++-..- . +.
T Consensus 23 ~~~~~~l~~~GaD~ielG~S--~-----------Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp~ 88 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGS--D-----------GVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVLN 88 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-----------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEETT
T ss_pred HHHHHHHHHcCCCEEEECCC--C-----------CCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccCc
Confidence 34567888899999999974 1 2345668889999998 79999873211 1 11
Q ss_pred -ChHHH-----HHHHHHcC-----CCEEE----EecCCcccccc---cccCCCCC----------CCCCCCCccCCCCCC
Q 014581 231 -DITEP-----ARVALRSG-----SEGVS----AINTIMSVMGI---DLKTLRPE----------PCVEGYSTPGGYSCK 282 (422)
Q Consensus 231 -~~~~~-----a~~l~~aG-----adgi~----v~n~~~~~~~i---d~e~~~p~----------~~~~~~~~~gG~sG~ 282 (422)
+..++ ...+.+.| .+-|- +.+.....-.+ |.+. .|. ....++.-.-+ +|.
T Consensus 89 ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~-~~~~~~~~a~~g~~~~~~~VYl~s-~G~ 166 (240)
T 1viz_A 89 SKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADL-NMDDIVAYARVSELLQLPIFYLEY-SGV 166 (240)
T ss_dssp BSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCC-CHHHHHHHHHHHHHTTCSEEEEEC-TTS
T ss_pred ccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCC-CHHHHHHHHHhCcccCCCEEEEeC-CCc
Confidence 11222 45677777 66554 54432110000 0000 000 00000110111 332
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhH-HHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG-LVKR 349 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~-~i~~ 349 (422)
+...+.|+++++.+. ++||+..|||++++++.+++. |||.|.+||++..+ |. ++++
T Consensus 167 ---~~~~~~i~~i~~~~~------~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~-~~~~~~~ 223 (240)
T 1viz_A 167 ---LGDIEAVKKTKAVLE------TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYED-FDRALKT 223 (240)
T ss_dssp ---CCCHHHHHHHHHTCS------SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHC-HHHHHTH
T ss_pred ---cChHHHHHHHHHhcC------CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhC-HHHHHHH
Confidence 334577888887642 689999999999999999888 99999999999988 76 6666
No 125
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=98.55 E-value=2.1e-06 Score=79.94 Aligned_cols=150 Identities=14% Similarity=0.118 Sum_probs=104.4
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH---HHhh
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG---WINA 215 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~---~vr~ 215 (422)
.++.+++..|+.|+.+-++ -.+++.|.+ .+.+ +|.+-++..... +.+.+.++ .+|+
T Consensus 54 ~v~~lr~~~p~~~~dvhLm-v~dp~~~i~---~~~~--Ad~itvH~ea~~---------------~~~~~~i~~~~~i~~ 112 (227)
T 1tqx_A 54 VINNLKKYTKSIFFDVHLM-VEYPEKYVP---LLKT--SNQLTFHFEALN---------------EDTERCIQLAKEIRD 112 (227)
T ss_dssp HHHHHGGGCSSCEEEEEEE-SSCGGGGGG---GCTT--SSEEEEEGGGGT---------------TCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCcEEEEEE-EcCHHHHHH---HHHh--CCEEEEeecCCc---------------cCHHHHHHHHHHHHH
Confidence 4666777667899999998 456766542 2323 899998863211 12445666 7777
Q ss_pred ccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 216 KATVPVWAKMTPNITDITEPARVALRSG-SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 216 ~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
. ++-+.+=+.|. ...+.++.+.+.| +|.|.+...-+ |+.|....|..++.|++
T Consensus 113 ~-G~k~gvalnp~--tp~~~~~~~l~~g~~D~VlvmsV~p-----------------------Gf~gq~f~~~~l~ki~~ 166 (227)
T 1tqx_A 113 N-NLWCGISIKPK--TDVQKLVPILDTNLINTVLVMTVEP-----------------------GFGGQSFMHDMMGKVSF 166 (227)
T ss_dssp T-TCEEEEEECTT--SCGGGGHHHHTTTCCSEEEEESSCT-----------------------TCSSCCCCGGGHHHHHH
T ss_pred c-CCeEEEEeCCC--CcHHHHHHHhhcCCcCEEEEeeecc-----------------------CCCCcccchHHHHHHHH
Confidence 5 55566666664 3345566677776 99886553211 12233334777888899
Q ss_pred HHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 295 IAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+++... +++|.+.|||. .+.+.++..+|||.+.+||+++..
T Consensus 167 lr~~~~------~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~~ 207 (227)
T 1tqx_A 167 LRKKYK------NLNIQVDGGLN-IETTEISASHGANIIVAGTSIFNA 207 (227)
T ss_dssp HHHHCT------TCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHTC
T ss_pred HHHhcc------CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhCC
Confidence 988763 68999999997 899999999999999999999974
No 126
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.55 E-value=4.2e-06 Score=80.06 Aligned_cols=149 Identities=13% Similarity=0.125 Sum_probs=89.7
Q ss_pred CCeEEEEeCC--C-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIME--E-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~--~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.+|..-++. + ...+.-..-++.+.+.|||.|++-+. +|.-...+.+.+.+-+++|++.++.| .+|+
T Consensus 109 ~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVIN---------ig~lk~g~~~~v~~eI~~V~~a~~~~-~lKV 178 (288)
T 3oa3_A 109 QVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMN---------YPWLSEKRYTDVFQDIRAVRLAAKDA-ILKV 178 (288)
T ss_dssp SCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHTTTS-EEEE
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEee---------hhhhcCCcHHHHHHHHHHHHHHhcCC-CceE
Confidence 3455544531 2 23333333445566679999995531 12222346677888888888887666 3675
Q ss_pred CC---CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhh
Q 014581 226 TP---NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300 (422)
Q Consensus 226 ~~---~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~ 300 (422)
-- .++ ++...++.+.++|+|+|..+..+ . .+|- .+...+.++++.+...
T Consensus 179 IlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf--------------------~-~~GA-----T~edv~lmr~~v~~~g 232 (288)
T 3oa3_A 179 ILETSQLTADEIIAGCVLSSLAGADYVKTSTGF--------------------N-GPGA-----SIENVSLMSAVCDSLQ 232 (288)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSS--------------------S-SCCC-----CHHHHHHHHHHHHHSS
T ss_pred EEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCC--------------------C-CCCC-----CHHHHHHHHHHHHHhC
Confidence 42 222 24556777889999999644211 0 1121 1223333333332222
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhH
Q 014581 301 SEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 301 ~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgta 338 (422)
. +++|.++|||++.+|+++++.+||+-+...++
T Consensus 233 ~-----~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g 265 (288)
T 3oa3_A 233 S-----ETRVKASGGIRTIEDCVKMVRAGAERLGASAG 265 (288)
T ss_dssp S-----CCEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred C-----CceEEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 2 79999999999999999999999997766543
No 127
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.49 E-value=4.5e-06 Score=79.23 Aligned_cols=174 Identities=10% Similarity=0.070 Sum_probs=97.9
Q ss_pred CCCCeEEEEeCCCCCHH-HHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEE
Q 014581 147 YPDKILIASIMEEYNKA-AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWA 223 (422)
Q Consensus 147 ~~~~pvi~si~~~~~~~-~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~v 223 (422)
.++.||++++. +.+|- .+-.+.+.+.++|+.++ +|++.-- ..+..+-..++...-...+.++.|+.+. ++--+
T Consensus 92 v~~iPV~Agv~-~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvg-lidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti- 167 (286)
T 2p10_A 92 VRHTPVLAGVN-GTDPFMVMSTFLRELKEIGFAGV-QNFPTVG-LIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTT- 167 (286)
T ss_dssp CSSSCEEEEEC-TTCTTCCHHHHHHHHHHHTCCEE-EECSCGG-GCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEC-
T ss_pred CCCCCEEEEEC-CcCCCcCHHHHHHHHHHhCCceE-EECCCcc-cccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEE-
Confidence 44789999975 44432 23334477888999999 9973111 1111122233332222333444443332 22221
Q ss_pred EECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC--CCc-chhHHHHHHHHHHHhh
Q 014581 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC--KAV-HPIALGKVMSIAKMMK 300 (422)
Q Consensus 224 Kl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG--~~i-~p~al~~v~~i~~~~~ 300 (422)
+.+ ...+-++++.++|+|.|+++-.+. .||+-| .++ ...+.+.+.++.++..
T Consensus 168 ---~~v-~~~eeA~amA~agpDiI~~h~glT---------------------~gglIG~~~avs~~~~~e~i~~i~~a~~ 222 (286)
T 2p10_A 168 ---PYV-FSPEDAVAMAKAGADILVCHMGLT---------------------TGGAIGARSGKSMDDCVSLINECIEAAR 222 (286)
T ss_dssp ---CEE-CSHHHHHHHHHHTCSEEEEECSCC------------------------------CCCHHHHHHHHHHHHHHHH
T ss_pred ---Eec-CCHHHHHHHHHcCCCEEEECCCCC---------------------CCCcccCCCcccHHHhHHHHHHHHHHHH
Confidence 112 235567788899999998885421 112211 111 1222345555555544
Q ss_pred ccCCCCCceEEE-ecCCCCHHHHHHHHHh--CCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 301 SEFNDKDYSLSG-IGGVETGGDAAEFILL--GANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 301 ~~~~~~~ipIIa-~GGI~s~~da~~~l~a--GAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
...+ ++.|+. .|||.+++|+..++.. |++++..+|++.+- | .++..+++
T Consensus 223 ~vnp--dvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~-p--~e~ai~~~ 274 (286)
T 2p10_A 223 TIRD--DIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL-P--AEEAIRSQ 274 (286)
T ss_dssp HHCS--CCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH-H--HHHHHHHH
T ss_pred HhCC--CcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC-C--HHHHHHHH
Confidence 3322 555554 4599999999999998 99999999999987 4 34444444
No 128
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.48 E-value=7.9e-06 Score=77.08 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=84.0
Q ss_pred HHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC---CCC--ChHHHHHHHHHc
Q 014581 168 LIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP---NIT--DITEPARVALRS 242 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~---~~~--~~~~~a~~l~~a 242 (422)
-++.+.+.|||.|++-+. +|.-...+.+.+.+-++++++.++ ...+|+-- .++ ++...++.+.++
T Consensus 116 Ea~~Ai~~GAdEIDmViN---------ig~lk~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~ea 185 (260)
T 3r12_A 116 EAIFAVESGADEIDMVIN---------VGMLKAKEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLA 185 (260)
T ss_dssp HHHHHHHHTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEee---------hhhhccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 345555679999997641 122233466777777778877764 22346532 232 245667778899
Q ss_pred CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHH
Q 014581 243 GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDA 322 (422)
Q Consensus 243 Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da 322 (422)
|+|+|..+..+. .+|- +++.|+.+++.+.. +++|-++|||++.+|+
T Consensus 186 GADfVKTSTGf~---------------------~~GA--------T~edV~lm~~~vg~-----~v~VKaAGGIrt~~~a 231 (260)
T 3r12_A 186 GAHFVKTSTGFG---------------------TGGA--------TAEDVHLMKWIVGD-----EMGVKASGGIRTFEDA 231 (260)
T ss_dssp TCSEEECCCSSS---------------------SCCC--------CHHHHHHHHHHHCT-----TSEEEEESSCCSHHHH
T ss_pred CcCEEEcCCCCC---------------------CCCC--------CHHHHHHHHHHhCC-----CceEEEeCCCCCHHHH
Confidence 999996442111 1121 24556667777643 7999999999999999
Q ss_pred HHHHHhCCCEEEEhhH
Q 014581 323 AEFILLGANTVQVCTG 338 (422)
Q Consensus 323 ~~~l~aGAd~V~vgta 338 (422)
++++.+||+-+...++
T Consensus 232 l~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 232 VKMIMYGADRIGTSSG 247 (260)
T ss_dssp HHHHHTTCSEEEESCH
T ss_pred HHHHHcCCceeecchH
Confidence 9999999996665543
No 129
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=98.47 E-value=2.9e-06 Score=79.25 Aligned_cols=153 Identities=16% Similarity=0.235 Sum_probs=102.6
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++. .+.|+-+-++ -.+++.|. +.+.++|||++-++.-.| . ..+.++++.+|+. ++
T Consensus 49 v~~lr~~-~~~~~dvhLm-v~dp~~~i---~~~~~aGAd~itvh~Ea~--------------~-~~~~~~i~~i~~~-G~ 107 (231)
T 3ctl_A 49 VSQVKKL-ATKPLDCHLM-VTRPQDYI---AQLARAGADFITLHPETI--------------N-GQAFRLIDEIRRH-DM 107 (231)
T ss_dssp HHHHHTT-CCSCEEEEEE-SSCGGGTH---HHHHHHTCSEEEECGGGC--------------T-TTHHHHHHHHHHT-TC
T ss_pred HHHHHhc-cCCcEEEEEE-ecCHHHHH---HHHHHcCCCEEEECcccC--------------C-ccHHHHHHHHHHc-CC
Confidence 5555654 3789999998 45776654 556678999999885321 1 1245677777775 55
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
-+.+=+.|.. ..+..+.+.+ ++|.|.+...- .|+.|....|..++.|+++++..
T Consensus 108 k~gv~lnp~t--p~~~~~~~l~-~~D~VlvmsV~-----------------------pGfggQ~f~~~~l~kI~~lr~~~ 161 (231)
T 3ctl_A 108 KVGLILNPET--PVEAMKYYIH-KADKITVMTVD-----------------------PGFAGQPFIPEMLDKLAELKAWR 161 (231)
T ss_dssp EEEEEECTTC--CGGGGTTTGG-GCSEEEEESSC-----------------------TTCSSCCCCTTHHHHHHHHHHHH
T ss_pred eEEEEEECCC--cHHHHHHHHh-cCCEEEEeeec-----------------------cCcCCccccHHHHHHHHHHHHHH
Confidence 5666666652 2333333333 68977654211 12223333467788888888876
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh-hHHHhh
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC-TGVMMH 342 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg-tall~~ 342 (422)
.+. +.+++|.+.|||. .+.+.+++.+|||.+.+| |+++..
T Consensus 162 ~~~--~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 162 ERE--GLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp HHH--TCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred hcc--CCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC
Confidence 421 1268999999997 789999999999999999 998874
No 130
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.47 E-value=5.3e-06 Score=75.78 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=58.3
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..+ +..+.+.|+|+|.+.+.+... +..+ . .+..++.++++++.. ++||
T Consensus 117 t~~e-~~~~~~~g~d~i~~~~~~~~~-----------------~~~~-~-----~~~~~~~l~~l~~~~-------~~pv 165 (215)
T 1xi3_A 117 SLEE-ALEAEKKGADYLGAGSVFPTK-----------------TKED-A-----RVIGLEGLRKIVESV-------KIPV 165 (215)
T ss_dssp SHHH-HHHHHHHTCSEEEEECSSCC---------------------C-C-----CCCHHHHHHHHHHHC-------SSCE
T ss_pred CHHH-HHHHHhcCCCEEEEcCCccCC-----------------CCCC-C-----CCcCHHHHHHHHHhC-------CCCE
Confidence 3444 556778999999876532210 0011 1 244567777777765 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++.|||. ++++.+++.+||++|.+||+++..
T Consensus 166 ia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 166 VAIGGIN-KDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp EEESSCC-TTTHHHHHTTTCSEEEESHHHHTS
T ss_pred EEECCcC-HHHHHHHHHcCCCEEEEhHHHhCC
Confidence 9999999 999999999999999999999875
No 131
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.45 E-value=1.5e-06 Score=80.90 Aligned_cols=157 Identities=16% Similarity=0.067 Sum_probs=95.6
Q ss_pred HHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC------------------C
Q 014581 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT------------------D 231 (422)
Q Consensus 170 ~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~------------------~ 231 (422)
+.+.++|+|+|++..+ .+-..+.+.++++++|+ .++|+++-.. +.+ +
T Consensus 30 ~~~~~~GtDaI~vGgs-------------~gvt~~~~~~~v~~ik~-~~~Piil~p~-~~~~~~~gaD~il~pslln~~~ 94 (235)
T 3w01_A 30 DAICMSQTDAIMIGGT-------------DDVTEDNVIHLMSKIRR-YPLPLVLEIS-NIESVMPGFDFYFVPTVLNSTD 94 (235)
T ss_dssp HHHHTSSCSEEEECCS-------------SCCCHHHHHHHHHHHTT-SCSCEEEECC-CSTTCCTTCSEEEEEEETTBSS
T ss_pred HHHHHcCCCEEEECCc-------------CCcCHHHHHHHHHHhcC-cCCCEEEecC-CHHHhhcCCCEEEEccccCCCC
Confidence 4456789999999853 12356789999999999 8999988432 221 1
Q ss_pred ----hHHHHHHHHHcCC-----CEEE----EecCCcccccccccCCCCCCCC-------------CCCC-ccCCCCCCCc
Q 014581 232 ----ITEPARVALRSGS-----EGVS----AINTIMSVMGIDLKTLRPEPCV-------------EGYS-TPGGYSCKAV 284 (422)
Q Consensus 232 ----~~~~a~~l~~aGa-----dgi~----v~n~~~~~~~id~e~~~p~~~~-------------~~~~-~~gG~sG~~i 284 (422)
+....+.+.+.|. +-|. +.|..... .- +-..++.+.. .++. .+-..+|..
T Consensus 95 ~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v-~~-v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~~- 171 (235)
T 3w01_A 95 VAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKV-AK-HTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIY- 171 (235)
T ss_dssp GGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHH-HH-HTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSC-
T ss_pred cchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCCh-hh-cccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCCc-
Confidence 1223445666676 5444 44432110 00 0000000000 0000 011114432
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
...+.|+++++.+. ++||+..|||++++++.++.. |||+|.+||++..+ |..+.++.+.+
T Consensus 172 --g~~~~v~~ir~~~~------~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~-~~~~~e~v~~v 231 (235)
T 3w01_A 172 --GDVSKVQAVSEHLT------ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD-IKKALKTVKIK 231 (235)
T ss_dssp --CCHHHHHHHHTTCS------SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC-HHHHHHTTCC-
T ss_pred --CCHHHHHHHHHhcC------CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC-HHHHHHHHHHH
Confidence 13577777877542 689999999999999999877 99999999999987 88777765443
No 132
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.42 E-value=5.2e-06 Score=78.12 Aligned_cols=82 Identities=20% Similarity=0.211 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..+ ++.+.+.|+|+|.+.+.+... + ++ +. .+..++.++++++... .++||
T Consensus 144 t~~E-a~~A~~~GaDyI~vgpvf~T~------t-K~-----------~~-----~~~gl~~l~~~~~~~~-----~~iPv 194 (243)
T 3o63_A 144 DPDQ-VAAAAAGDADYFCVGPCWPTP------T-KP-----------GR-----AAPGLGLVRVAAELGG-----DDKPW 194 (243)
T ss_dssp SHHH-HHHHHHSSCSEEEECCSSCCC------C----------------------CCCHHHHHHHHTC--------CCCE
T ss_pred CHHH-HHHHhhCCCCEEEEcCccCCC------C-CC-----------Cc-----chhhHHHHHHHHHhcc-----CCCCE
Confidence 4444 667778999999876544220 0 00 11 1334566666665421 17999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++.||| +++++.+++.+||++|.++|+++..
T Consensus 195 vAiGGI-~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 195 FAIGGI-NAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp EEESSC-CTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred EEecCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 999999 8999999999999999999999974
No 133
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.40 E-value=1.4e-05 Score=73.54 Aligned_cols=163 Identities=16% Similarity=0.120 Sum_probs=103.2
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++.+|+.+++.-+.-...++.+.+ .+.++|+|++-+|... ..+.+.++++.+++. +.
T Consensus 47 i~~l~~~~p~~~v~lD~kl~dip~t~~~---~~~~~Gad~itvh~~~---------------g~~~l~~~~~~~~~~-g~ 107 (216)
T 1q6o_A 47 VRDLKALYPHKIVLADAKIADAGKILSR---MCFEANADWVTVICCA---------------DINTAKGALDVAKEF-NG 107 (216)
T ss_dssp HHHHHHHCTTSEEEEEEEECSCHHHHHH---HHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhCCCCeEEEEEEecccHHHHHH---HHHhCCCCEEEEeccC---------------CHHHHHHHHHHHHHc-CC
Confidence 5556666667777765542234666544 5667899999998531 123356667777664 67
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
++++++...++ ...++.+.+.|.+.++++-.. +..+ .|..| +.+.++++++.+
T Consensus 108 ~~~~~ll~~~t--~~~~~~l~~~~~~~~vl~~a~---~~~~----------------~G~~g------~~~~i~~lr~~~ 160 (216)
T 1q6o_A 108 DVQIELTGYWT--WEQAQQWRDAGIGQVVYHRSR---DAQA----------------AGVAW------GEADITAIKRLS 160 (216)
T ss_dssp EEEEEECSCCC--HHHHHHHHHTTCCEEEEECCH---HHHH----------------TTCCC------CHHHHHHHHHHH
T ss_pred CceeeeeeCCC--hhhHHHHHhcCcHHHHHHHHH---HHHh----------------cCCCC------CHHHHHHHHHhc
Confidence 87777752233 345566667787776664211 1110 12222 134455666665
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHH
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEEL 354 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l 354 (422)
+. ++||++.|||. ++.+.+++.+|||.+.+||+++.. .| ..++++.+.+
T Consensus 161 ~~-----~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i 211 (216)
T 1q6o_A 161 DM-----GFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSI 211 (216)
T ss_dssp HT-----TCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred CC-----CCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHH
Confidence 32 68899999998 888999999999999999999974 23 3455555544
No 134
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.38 E-value=3.5e-06 Score=85.93 Aligned_cols=170 Identities=15% Similarity=0.153 Sum_probs=112.9
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
|+.+++.. +.||+-.=. -.+.|+ +.+ +..+|||+|=|+.++- +.+.+.++++..++. +.
T Consensus 100 L~~vr~~v-~lPvLrKDF---I~d~~Q-i~e-a~~~GAD~ILLi~a~l--------------~~~~l~~l~~~a~~l-gm 158 (452)
T 1pii_A 100 LPIVSQIA-PQPILCKDF---IIDPYQ-IYL-ARYYQADACLLMLSVL--------------DDDQYRQLAAVAHSL-EM 158 (452)
T ss_dssp HHHHHHHC-CSCEEEESC---CCSHHH-HHH-HHHTTCSEEEEETTTC--------------CHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhc-CCCeEEEec---cCCHHH-HHH-HHHcCCCEEEEEcccC--------------CHHHHHHHHHHHHHc-CC
Confidence 44555555 789875432 233443 333 6678999999997532 125677787777664 77
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
-++|=+. + .+-++.+.+.|++-|-+.|+-.. +++ ..++...++.+.+
T Consensus 159 ~~LvEvh----~-~eE~~~A~~lga~iIGinnr~L~-------t~~---------------------~dl~~~~~L~~~i 205 (452)
T 1pii_A 159 GVLTEVS----N-EEEQERAIALGAKVVGINNRDLR-------DLS---------------------IDLNRTRELAPKL 205 (452)
T ss_dssp EEEEEEC----S-HHHHHHHHHTTCSEEEEESEETT-------TTE---------------------ECTHHHHHHHHHH
T ss_pred eEEEEeC----C-HHHHHHHHHCCCCEEEEeCCCCC-------CCC---------------------CCHHHHHHHHHhC
Confidence 7777543 3 34467788999998877775321 111 1134455666666
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCCCHHHhh
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~si~d~~ 370 (422)
+. ++++|+-|||.|++|+.++..+ |++|-||+++++. ++.-+.+.+-+....+=+|+++.+|..
T Consensus 206 p~-----~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~-~d~~~~~~~l~~~~~KICGit~~eda~ 269 (452)
T 1pii_A 206 GH-----NVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH-DDLHAAVRRVLLGENKVCGLTRGQDAK 269 (452)
T ss_dssp CT-----TSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC-SCHHHHHHHHHHCSCEECCCCSHHHHH
T ss_pred CC-----CCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC-cCHHHHHHHHHHHhccccCCCcHHHHH
Confidence 53 7899999999999999999999 9999999999986 443333332222233456888888865
No 135
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.37 E-value=1.9e-06 Score=81.02 Aligned_cols=91 Identities=21% Similarity=0.276 Sum_probs=70.6
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.++.++++.+.++|+|.|.+.+.... ..+ .+..++.++++++.. ++|
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~--------------------~~~------~~~~~~~i~~i~~~~-------~ip 76 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITAS--------------------VEK------RKTMLELVEKVAEQI-------DIP 76 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCS--------------------SSH------HHHHHHHHHHHHTTC-------CSC
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchh--------------------hcC------CcccHHHHHHHHHhC-------CCC
Confidence 46889999999999999988853211 000 133456666676644 799
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
|++.|||.+++++.+++.+|||.|.+++.++.+ |..+.++.+.+
T Consensus 77 vi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~-p~~~~~~~~~~ 120 (253)
T 1thf_D 77 FTVGGGIHDFETASELILRGADKVSINTAAVEN-PSLITQIAQTF 120 (253)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESHHHHHC-THHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhC-hHHHHHHHHHc
Confidence 999999999999999999999999999999988 77777665543
No 136
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.36 E-value=1.4e-05 Score=74.48 Aligned_cols=134 Identities=14% Similarity=0.179 Sum_probs=88.5
Q ss_pred HHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc
Q 014581 138 KEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~ 217 (422)
+.|+++++.+|+..+.+.-. .+.++ ++.+.++|+|+|- +|+. +++ ++++.++.
T Consensus 74 e~I~~l~~~~~~~~iGaGTV--lt~~~----a~~Ai~AGA~fIv----sP~~------------~~~----vi~~~~~~- 126 (232)
T 4e38_A 74 EAIRLLRQAQPEMLIGAGTI--LNGEQ----ALAAKEAGATFVV----SPGF------------NPN----TVRACQEI- 126 (232)
T ss_dssp HHHHHHHHHCTTCEEEEECC--CSHHH----HHHHHHHTCSEEE----CSSC------------CHH----HHHHHHHH-
T ss_pred HHHHHHHHhCCCCEEeECCc--CCHHH----HHHHHHcCCCEEE----eCCC------------CHH----HHHHHHHc-
Confidence 34666777777655554332 34544 4556678999995 3542 223 34444443
Q ss_pred CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 218 ~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
++|++. +..+..+ +..+.++|+|.|.++-.. ..|| ...++.++.
T Consensus 127 gi~~ip----Gv~TptE-i~~A~~~Gad~vK~FPa~---------------------~~gG----------~~~lkal~~ 170 (232)
T 4e38_A 127 GIDIVP----GVNNPST-VEAALEMGLTTLKFFPAE---------------------ASGG----------ISMVKSLVG 170 (232)
T ss_dssp TCEEEC----EECSHHH-HHHHHHTTCCEEEECSTT---------------------TTTH----------HHHHHHHHT
T ss_pred CCCEEc----CCCCHHH-HHHHHHcCCCEEEECcCc---------------------cccC----------HHHHHHHHH
Confidence 788874 3334444 556789999999774310 0122 256677776
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
.++ ++|+++.|||. ++++.+++.+||.++.+||.+..
T Consensus 171 p~p------~ip~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~~ 207 (232)
T 4e38_A 171 PYG------DIRLMPTGGIT-PSNIDNYLAIPQVLACGGTWMVD 207 (232)
T ss_dssp TCT------TCEEEEBSSCC-TTTHHHHHTSTTBCCEEECGGGC
T ss_pred Hhc------CCCeeeEcCCC-HHHHHHHHHCCCeEEEECchhcC
Confidence 553 79999999995 89999999999999999998763
No 137
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=98.35 E-value=1.5e-05 Score=74.69 Aligned_cols=169 Identities=12% Similarity=0.094 Sum_probs=111.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 152 vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
+..||. ..+...+.+.++.++++|+|.+++.+- .|+- .+| + ++++++|+.++. =+++-
T Consensus 16 i~psil-a~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~----t~G------~----~~v~~lr~~~~~--DvhLM- 77 (237)
T 3cu2_A 16 LSVGIL-SANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF----TVG------A----IGIKYFPTHCFK--DVHLM- 77 (237)
T ss_dssp EEEEGG-GSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB----CBC------T----HHHHTSCTTSEE--EEEEE-
T ss_pred EEEeee-eCCcccHHHHHHHHHHcCCCEEEEEEecCccccch----hhh------H----HHHHHHhhhCCC--CeEEE-
Confidence 778886 345556777788888899999988862 3432 112 1 466777776643 45543
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCc----------------------c-cccccccCCCCCCC-------CC---CCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIM----------------------S-VMGIDLKTLRPEPC-------VE---GYS 274 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~----------------------~-~~~id~e~~~p~~~-------~~---~~~ 274 (422)
+.+....++.+.++|||+++++--.. + ..++.+.-.+|.-. +. -.+
T Consensus 78 -v~~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMs 156 (237)
T 3cu2_A 78 -VRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLT 156 (237)
T ss_dssp -CSCHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEES
T ss_pred -EECHHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeee
Confidence 23667889999999999998884211 0 11222211111110 00 001
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHH--hCCCEEEEhhHHHhh
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL--LGANTVQVCTGVMMH 342 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~--aGAd~V~vgtall~~ 342 (422)
...|+.|....|..++.|+++++...+. +.+++|.+.|||. .+++.++.. +|||.+.+||+++..
T Consensus 157 v~pgfggq~f~~~~l~ki~~lr~~~~~~--~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 157 LDPRNGTKYPSELILDRVIQVEKRLGNR--RVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp EETTTTEECCHHHHHHHHHHHHHHHGGG--GGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred eccCcCCeecChhHHHHHHHHHHHHHhc--CCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 2345666666677888899998887421 1258999999997 899999999 999999999999974
No 138
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.31 E-value=2.5e-05 Score=72.27 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=88.2
Q ss_pred CCeEEEEeCC--C-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIME--E-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~--~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+..+...++. + .+.+.-..-++.+.+.|||.|++.+. +|.-...+.+.+.+-+.++++.++.+ .+|+
T Consensus 54 ~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vin---------ig~~~~g~~~~v~~ei~~v~~a~~~~-~lkv 123 (220)
T 1ub3_A 54 PFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLH---------LGRAKAGDLDYLEAEVRAVREAVPQA-VLKV 123 (220)
T ss_dssp SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHSTTS-EEEE
T ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEeccc---------chhhhCCCHHHHHHHHHHHHHHHcCC-CceE
Confidence 3445555531 1 23333334455566679999998752 12222245566777777777776444 5563
Q ss_pred C---CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhh
Q 014581 226 T---PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300 (422)
Q Consensus 226 ~---~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~ 300 (422)
- ..++ .+...++.+.++|+|+|..+..+. .+|- +.+.++.+++.+.
T Consensus 124 Ilet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~---------------------~~ga--------t~~dv~~m~~~vg 174 (220)
T 1ub3_A 124 ILETGYFSPEEIARLAEAAIRGGADFLKTSTGFG---------------------PRGA--------SLEDVALLVRVAQ 174 (220)
T ss_dssp ECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS---------------------SCCC--------CHHHHHHHHHHHT
T ss_pred EEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCC---------------------CCCC--------CHHHHHHHHHhhC
Confidence 2 1222 255677788999999996332111 1221 2345556666653
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 301 SEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 301 ~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
. ++||-++|||++.+|+++++.+||+-+...
T Consensus 175 ~-----~v~VkaaGGirt~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 175 G-----RAQVKAAGGIRDRETALRMLKAGASRLGTS 205 (220)
T ss_dssp T-----SSEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred C-----CCeEEEECCCCCHHHHHHHHHCCCcccchh
Confidence 2 799999999999999999999999944443
No 139
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.31 E-value=2.3e-05 Score=78.48 Aligned_cols=153 Identities=8% Similarity=-0.004 Sum_probs=111.3
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
|+..++. +.+++++.+.++++.++|++.|+++++| +++...+++++||+.+ ++||.++....+
T Consensus 138 ~~~~~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~gd~~l~vD~n~~~ 201 (384)
T 2pgw_A 138 GYFYFLQ-GETAEELARDAAVGHAQGERVFYLKVGR---------------GEKLDLEITAAVRGEIGDARLRLDANEGW 201 (384)
T ss_dssp EBCEECC-CSSHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHHTTSTTCEEEEECTTCC
T ss_pred EEEEECC-CCCHHHHHHHHHHHHHcCCCEEEECcCC---------------CHHHHHHHHHHHHHHcCCcEEEEecCCCC
Confidence 4444553 4578889999998888999999999764 3455678889999988 689999876655
Q ss_pred C--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 230 T--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 230 ~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
+ +..++++.+.+.|++.|. +|.+ +..++..+++++.+ +
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~-------~ 241 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIE----------------QPTV-----------------SWSIPAMAHVREKV-------G 241 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHC-------S
T ss_pred CHHHHHHHHHHHHhcCCCEEe----------------CCCC-----------------hhhHHHHHHHHhhC-------C
Confidence 4 345778888888988763 1111 11245556677765 7
Q ss_pred ceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 308 YSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+||++.+.+.+.+++.+++..| +|.|++-..-+- |+.-..++. ++.+++|+.
T Consensus 242 iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~G-Git~~~~i~----~~A~~~g~~ 294 (384)
T 2pgw_A 242 IPIVADQAAFTLYDVYEICRQRAADMICIGPREIG-GIQPMMKAA----AVAEAAGLK 294 (384)
T ss_dssp SCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHT-SHHHHHHHH----HHHHHTTCC
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhC-CHHHHHHHH----HHHHHCCCe
Confidence 9999999999999999999976 899999876553 355444443 455667764
No 140
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.29 E-value=1.5e-05 Score=75.90 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=83.8
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc---cCccEEEEECC---------CCCChHHHH
Q 014581 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK---ATVPVWAKMTP---------NITDITEPA 236 (422)
Q Consensus 169 a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~---~~iPv~vKl~~---------~~~~~~~~a 236 (422)
++.+.+.|+|.|.+.+.--. .+.+.+.+.++.+++. ..+|+++=..+ +...+...+
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~ 165 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGS------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAA 165 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTS------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCC------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHH
Confidence 34455679999988542111 1112233333333332 27888774333 101134446
Q ss_pred HHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCC
Q 014581 237 RVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGV 316 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI 316 (422)
+.+.+.|+|+|.+. + . + ..+.++++++.++ .+||+++|||
T Consensus 166 ~~a~~~GAD~vkt~-~-~----------------------~----------~~e~~~~~~~~~~------~~pV~asGGi 205 (263)
T 1w8s_A 166 RIALELGADAMKIK-Y-T----------------------G----------DPKTFSWAVKVAG------KVPVLMSGGP 205 (263)
T ss_dssp HHHHHHTCSEEEEE-C-C----------------------S----------SHHHHHHHHHHTT------TSCEEEECCS
T ss_pred HHHHHcCCCEEEEc-C-C----------------------C----------CHHHHHHHHHhCC------CCeEEEEeCC
Confidence 77899999998655 1 0 0 1245666777652 3599999999
Q ss_pred C--CHHHHHHHH----HhCCCEEEEhhHHHhhhhHHHHHHHHHHHHH
Q 014581 317 E--TGGDAAEFI----LLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357 (422)
Q Consensus 317 ~--s~~da~~~l----~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~ 357 (422)
. +.+|+.+.+ .+||+++.++|+++.. ++ +....+.|.+.
T Consensus 206 ~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~-~d-p~~~~~~l~~~ 250 (263)
T 1w8s_A 206 KTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR-RD-ALKFARALAEL 250 (263)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS-TT-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC-cC-HHHHHHHHHHH
Confidence 9 999999888 8999999999999986 44 34444444433
No 141
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.29 E-value=3.5e-06 Score=79.15 Aligned_cols=91 Identities=24% Similarity=0.304 Sum_probs=70.1
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.++.++++.+.++|+|.|.+++.... +. + .+..++.++++++.+ ++|
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~----------------------~~-~---~~~~~~~i~~i~~~~-------~iP 77 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISAT----------------------HE-E---RAILLDVVARVAERV-------FIP 77 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSS----------------------TT-C---HHHHHHHHHHHHTTC-------CSC
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcc----------------------cc-C---ccccHHHHHHHHHhC-------CCC
Confidence 46789999999999999987742210 00 0 123455666666654 799
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
|++.|||.+.+++.+++.+|||+|.+++.++.+ |..++++.+.+
T Consensus 78 vi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~-p~~~~~~~~~~ 121 (252)
T 1ka9_F 78 LTVGGGVRSLEDARKLLLSGADKVSVNSAAVRR-PELIRELADHF 121 (252)
T ss_dssp EEEESSCCSHHHHHHHHHHTCSEEEECHHHHHC-THHHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEChHHHhC-cHHHHHHHHHc
Confidence 999999999999999999999999999999987 77777766543
No 142
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.28 E-value=1.8e-05 Score=73.57 Aligned_cols=128 Identities=18% Similarity=0.247 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC---C----C--ChHHHHHH
Q 014581 168 LIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN---I----T--DITEPARV 238 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~---~----~--~~~~~a~~ 238 (422)
-++.+.+.|||.|++-+. +|.-...+.+.+.+-++++++.++ ...+|+--. + + ++...++.
T Consensus 85 E~~~Ai~~GAdEIDmVin---------ig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~i 154 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVID---------VGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRV 154 (231)
T ss_dssp HHHHHHHTTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEee---------hHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHH
Confidence 345555679999998652 122233566777777788888774 234465321 2 2 24566677
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET 318 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s 318 (422)
+.++|+|+|..+..+. ..+|- +++.|+.+++.+.. +++|-++|||++
T Consensus 155 a~~aGADfVKTSTGf~--------------------~~~gA--------t~edv~lm~~~v~~-----~v~VKaaGGIrt 201 (231)
T 3ndo_A 155 ARDAGADFVKTSTGFH--------------------PSGGA--------SVQAVEIMARTVGE-----RLGVKASGGIRT 201 (231)
T ss_dssp HHHTTCSEEECCCSCC--------------------TTCSC--------CHHHHHHHHHHHTT-----TSEEEEESSCCS
T ss_pred HHHHCcCEEEcCCCCC--------------------CCCCC--------CHHHHHHHHHHhCC-----CceEEEeCCCCC
Confidence 8899999996432211 01221 24566677777753 799999999999
Q ss_pred HHHHHHHHHhCCCEEEEhhH
Q 014581 319 GGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 319 ~~da~~~l~aGAd~V~vgta 338 (422)
.+|+++++.+||+-+...++
T Consensus 202 ~~~a~~~i~aGa~RiGtS~g 221 (231)
T 3ndo_A 202 AEQAAAMLDAGATRLGLSGS 221 (231)
T ss_dssp HHHHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHHHhcchhcccchH
Confidence 99999999999996665543
No 143
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=98.26 E-value=9e-05 Score=71.73 Aligned_cols=208 Identities=12% Similarity=0.088 Sum_probs=128.2
Q ss_pred CHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCCC
Q 014581 70 NYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPD 149 (422)
Q Consensus 70 ~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~ 149 (422)
++-..+.+.++||-++-+++.+. ..+.|+++.+.+ +.++.+..++.+.+.. +
T Consensus 38 D~~sA~l~e~aG~dai~vs~~s~------------------------a~~~G~pD~~~v---t~~em~~~~~~I~r~~-~ 89 (305)
T 3ih1_A 38 DAMAALVARNTGFLALYLSGAAY------------------------TASKGLPDLGIV---TSTEVAERARDLVRAT-D 89 (305)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHH------------------------HHHHTCCSSSCS---CHHHHHHHHHHHHHHH-C
T ss_pred CHHHHHHHHHcCCCEEEECcHHH------------------------HHhCCCCCCCcC---CHHHHHHHHHHHHHhc-C
Confidence 46666777778988777765332 112355554433 3888888888777654 6
Q ss_pred CeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccC-----CCCCCCccccccccccChhHHHHHHHHHhhccCcc--E
Q 014581 150 KILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFS-----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP--V 221 (422)
Q Consensus 150 ~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~s-----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iP--v 221 (422)
.||++-+-.++ +++...+.+++++++|+++|.|.=. |.|.. |..+. +.+...+-+++++++ +.+ |
T Consensus 90 ~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~-----gk~l~-~~~e~~~rI~Aa~~A-~~~~~I 162 (305)
T 3ih1_A 90 LPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLN-----GKKLV-TTEELVQKIKAIKEV-APSLYI 162 (305)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTT-----CCCBC-CHHHHHHHHHHHHHH-CTTSEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCC-----CCccc-CHHHHHHHHHHHHHc-CCCeEE
Confidence 89999886554 5677788899999999999988632 33321 22222 333333444444444 444 4
Q ss_pred EEEECCC----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 222 WAKMTPN----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 222 ~vKl~~~----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
..+.-.. +++..+-++++.++|||+|.+.... +.+.++++.+
T Consensus 163 ~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~----------------------------------~~~~~~~i~~ 208 (305)
T 3ih1_A 163 VARTDARGVEGLDEAIERANAYVKAGADAIFPEALQ----------------------------------SEEEFRLFNS 208 (305)
T ss_dssp EEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTCC----------------------------------SHHHHHHHHH
T ss_pred EEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCCC----------------------------------CHHHHHHHHH
Confidence 4554321 2245566777899999999765310 1345667777
Q ss_pred HhhccCCCCCceEEEe---cCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 298 MMKSEFNDKDYSLSGI---GGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~---GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
.+ ++|++++ +|-.-.-++.++-.+|...|.++..++..-...+.+..++
T Consensus 209 ~~-------~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~ 260 (305)
T 3ih1_A 209 KV-------NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVAAKAYENVFTL 260 (305)
T ss_dssp HS-------CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHHHHHHHHHHHH
T ss_pred Hc-------CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHH
Confidence 76 6788764 4432223456677789999999988886533334333333
No 144
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.25 E-value=1e-05 Score=76.26 Aligned_cols=143 Identities=11% Similarity=0.084 Sum_probs=96.6
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
|+.+++.. +.||+-.=. -.+.|+ +.+ +..+|||+|-|+.++- +.+.+.++++..++. +.
T Consensus 93 L~~ir~~v-~lPvLrKDf---i~~~~q-i~e-a~~~GAD~ilLi~a~l--------------~~~~l~~l~~~a~~l-Gl 151 (251)
T 1i4n_A 93 VRAARNLT-CRPILAKDF---YIDTVQ-VKL-ASSVGADAILIIARIL--------------TAEQIKEIYEAAEEL-GM 151 (251)
T ss_dssp HHHHHTTC-CSCEEEECC---CCSTHH-HHH-HHHTTCSEEEEEGGGS--------------CHHHHHHHHHHHHTT-TC
T ss_pred HHHHHHhC-CCCEEEeeC---CCCHHH-HHH-HHHcCCCEEEEecccC--------------CHHHHHHHHHHHHHc-CC
Confidence 44555544 789986543 122342 333 6678999999997531 225677788777664 77
Q ss_pred cEEEEECCCCCChHHHHHHHHHc-CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 220 PVWAKMTPNITDITEPARVALRS-GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~a-Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
-++|=+. +. +-++.+.+. |++.|-+.|+-.. ++++ .+....++.+.
T Consensus 152 ~~lvEv~----~~-eE~~~A~~l~g~~iIGinnr~l~-------t~~~---------------------d~~~~~~l~~~ 198 (251)
T 1i4n_A 152 DSLVEVH----SR-EDLEKVFSVIRPKIIGINTRDLD-------TFEI---------------------KKNVLWELLPL 198 (251)
T ss_dssp EEEEEEC----SH-HHHHHHHTTCCCSEEEEECBCTT-------TCCB---------------------CTTHHHHHGGG
T ss_pred eEEEEeC----CH-HHHHHHHhcCCCCEEEEeCcccc-------cCCC---------------------CHHHHHHHHHh
Confidence 7777543 33 346778888 9998877775321 1111 01223345555
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++. ++++|+-|||.+++|+.++..+ |++|-||++++..
T Consensus 199 ip~-----~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 199 VPD-----DTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp SCT-----TSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHC
T ss_pred CCC-----CCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 542 6899999999999999999999 9999999999985
No 145
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.22 E-value=3.6e-05 Score=72.21 Aligned_cols=154 Identities=17% Similarity=0.212 Sum_probs=98.4
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++.. +.||.-- .+-.+.|+- .....+|||+|=|-.++-. .+.+.++++..++. +.
T Consensus 96 L~~vr~~v-~lPvLrK---DFiid~yQI--~eAr~~GADaILLI~a~L~--------------~~~l~~l~~~A~~l-Gl 154 (258)
T 4a29_A 96 LRKIASSV-SIPILMS---DFIVKESQI--DDAYNLGADTVLLIVKILT--------------ERELESLLEYARSY-GM 154 (258)
T ss_dssp HHHHHTTC-SSCEEEE---SCCCSHHHH--HHHHHHTCSEEEEEGGGSC--------------HHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhc-CCCEeec---cccccHHHH--HHHHHcCCCeeehHHhhcC--------------HHHHHHHHHHHHHH-hH
Confidence 44455544 7888542 333334431 1233469999988765422 24466666655443 66
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
-++|-+. +..+ ++.+.+.|++-|-+-|| |++|++ ..+....+++..+
T Consensus 155 ~~LvEVh----~~~E-l~rAl~~~a~iIGINNR-------nL~tf~---------------------vdl~~t~~L~~~i 201 (258)
T 4a29_A 155 EPLILIN----DEND-LDIALRIGARFIGIMSR-------DFETGE---------------------INKENQRKLISMI 201 (258)
T ss_dssp CCEEEES----SHHH-HHHHHHTTCSEEEECSB-------CTTTCC---------------------BCHHHHHHHHTTS
T ss_pred HHHHhcc----hHHH-HHHHhcCCCcEEEEeCC-------Cccccc---------------------cCHHHHHHHHhhC
Confidence 6666542 3344 56777899997755554 233322 1134445566666
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+. ++.+|+-+||.+++|+.++..+|+++|-||+++|+. |+-.+++.++
T Consensus 202 p~-----~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~-~d~~~~Li~G 249 (258)
T 4a29_A 202 PS-----NVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRN-PEKIKELIEG 249 (258)
T ss_dssp CT-----TSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHC-TTHHHHHHC-
T ss_pred CC-----CCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCC-CcHHHHHHcC
Confidence 54 788999999999999999999999999999999998 6666666554
No 146
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.20 E-value=9.4e-06 Score=75.66 Aligned_cols=89 Identities=22% Similarity=0.231 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..++++.+.++|+|+|.+++.... +. + .+..++.++++++.+ ++||
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~----------------------~~-~---~~~~~~~i~~i~~~~-------~ipv 80 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAA----------------------PE-G---RATFIDSVKRVAEAV-------SIPV 80 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCC----------------------TT-T---HHHHHHHHHHHHHHC-------SSCE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcc----------------------cc-C---CcccHHHHHHHHHhc-------CCCE
Confidence 5788999999999999988753211 00 0 133456777777765 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
++.|||.+++++.+++.+|||+|.+++.++.+ |.++.++.+.
T Consensus 81 i~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~-~~~~~~~~~~ 122 (253)
T 1h5y_A 81 LVGGGVRSLEDATTLFRAGADKVSVNTAAVRN-PQLVALLARE 122 (253)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEESHHHHHC-THHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEChHHhhC-cHHHHHHHHH
Confidence 99999999999999999999999999999877 7777666554
No 147
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.18 E-value=4.3e-05 Score=72.26 Aligned_cols=145 Identities=14% Similarity=0.110 Sum_probs=89.5
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++.. +.||...- +-.+.++ +..+..+|||+|-|.... + . +.++++++..++. +.
T Consensus 98 l~~i~~~v-~lPvl~kd---fI~d~~q--i~~a~~~GAD~VlL~~~~------------l-~--~~l~~l~~~a~~l-Gl 155 (254)
T 1vc4_A 98 LKRVREAV-DLPLLRKD---FVVDPFM--LEEARAFGASAALLIVAL------------L-G--ELTGAYLEEARRL-GL 155 (254)
T ss_dssp HHHHHHHC-CSCEEEES---CCCSHHH--HHHHHHTTCSEEEEEHHH------------H-G--GGHHHHHHHHHHH-TC
T ss_pred HHHHHHhc-CCCEEECC---cCCCHHH--HHHHHHcCCCEEEECccc------------h-H--HHHHHHHHHHHHC-CC
Confidence 33444444 78886533 2222222 233556799999887421 1 1 4566676655443 44
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
-+.|-+. +..+ ++.+.+.|++.|-+.|+... +..+ .++.+.++++.+
T Consensus 156 ~~lvev~----~~~E-~~~a~~~gad~IGvn~~~l~-------~~~~---------------------dl~~~~~L~~~i 202 (254)
T 1vc4_A 156 EALVEVH----TERE-LEIALEAGAEVLGINNRDLA-------TLHI---------------------NLETAPRLGRLA 202 (254)
T ss_dssp EEEEEEC----SHHH-HHHHHHHTCSEEEEESBCTT-------TCCB---------------------CTTHHHHHHHHH
T ss_pred eEEEEEC----CHHH-HHHHHHcCCCEEEEccccCc-------CCCC---------------------CHHHHHHHHHhC
Confidence 4444432 3444 45788899998877775422 1100 012334455555
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+... .++|+|+.|||.|++|+.++.. ||++|.||++++..
T Consensus 203 ~~~~--~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 203 RKRG--FGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp HHTT--CCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred cccc--CCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 3100 0589999999999999999999 99999999999986
No 148
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.17 E-value=4e-05 Score=70.96 Aligned_cols=166 Identities=16% Similarity=0.157 Sum_probs=102.7
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC-
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT- 218 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~- 218 (422)
++.+++.+|+.+++.-+.-...++.+.+. +.++|+|++.+|.... .+.+++.++.+++.-.
T Consensus 49 v~~l~~~~p~~~iflDlKl~Dip~t~~~~---~~~~Gad~vtVH~~~g---------------~~~l~~a~~~~~~~g~~ 110 (221)
T 3exr_A 49 VEVLRSLFPDKIIVADTKCADAGGTVAKN---NAVRGADWMTCICSAT---------------IPTMKAARKAIEDINPD 110 (221)
T ss_dssp HHHHHHHCTTSEEEEEEEECSCHHHHHHH---HHTTTCSEEEEETTSC---------------HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhCCCCcEEEEEEeeccHHHHHHH---HHHcCCCEEEEeccCC---------------HHHHHHHHHHHHhcCCC
Confidence 55666667788888876533346555443 5678999999986422 1346666666665432
Q ss_pred -ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 219 -VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 219 -iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
+-+.|-+.+.. + .+.++.+.+.|++.+++.-.. +.. ..|.- .+..-++.+++
T Consensus 111 ~~~~~Vt~lts~-~-~~~~~~~~~~~~~~~v~~~a~------~~~-------------~~Gvv------~s~~e~~~ir~ 163 (221)
T 3exr_A 111 KGEIQVELYGDW-T-YDQAQQWLDAGISQAIYHQSR------DAL-------------LAGET------WGEKDLNKVKK 163 (221)
T ss_dssp TCEEEEECCSSC-C-HHHHHHHHHTTCCEEEEECCH------HHH-------------HHTCC------CCHHHHHHHHH
T ss_pred cceEEEEEcCCC-C-HHHHHHHHcCCHHHHHHHHHH------hcC-------------CCccc------cCHHHHHHHHH
Confidence 33455544432 2 344556678899887764211 110 01110 01123455666
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHHH
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELKD 356 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~~ 356 (422)
.+.. +++|...||| +++++.++..+|||.+.+||+++.. .| ..++++.+.+++
T Consensus 164 ~~~~-----~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 164 LIEM-----GFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKR 218 (221)
T ss_dssp HHHH-----TCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred hhcC-----CceEEEECCC-CHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHHH
Confidence 5532 6889999999 5888999999999999999999863 13 346666666543
No 149
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.14 E-value=2.3e-06 Score=80.16 Aligned_cols=86 Identities=16% Similarity=0.109 Sum_probs=67.2
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.++.++++.+.++|+|.|.+++.... +... +..++.+++++ .. ++|
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~---------------------~~~~-----~~~~~~i~~i~-~~-------~ip 75 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNA---------------------IENS-----GENLPVLEKLS-EF-------AEH 75 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHH---------------------HHCC-----CTTHHHHHHGG-GG-------GGG
T ss_pred cCHHHHHHHHHHcCCCEEEEeccccc---------------------ccCC-----chhHHHHHHHH-hc-------CCc
Confidence 46889999999999999998753211 0001 12245566666 44 799
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHH
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i 350 (422)
|++.|||.+.+++.+++.+|||.|+++++++.+ |+++.++
T Consensus 76 vi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~-p~~~~~~ 115 (241)
T 1qo2_A 76 IQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLED-PSFLKSL 115 (241)
T ss_dssp EEEESSCCSHHHHHHHHHTTCCEEEECHHHHHC-TTHHHHH
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECchHhhC-hHHHHHH
Confidence 999999999999999999999999999999988 7777666
No 150
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.12 E-value=5.5e-05 Score=69.18 Aligned_cols=141 Identities=17% Similarity=0.071 Sum_probs=85.8
Q ss_pred HHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCcc
Q 014581 141 KQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220 (422)
Q Consensus 141 ~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iP 220 (422)
+.+++.+ +.+++.-+.-.--...-.+.++.+.++|+|++.+|.... .+ .++.+++...++
T Consensus 44 ~~lr~~~-~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g---------------~~----~i~~~~~~~gv~ 103 (208)
T 2czd_A 44 RRLKEET-GVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVG---------------RD----SVMAVKELGEII 103 (208)
T ss_dssp HHHHHHH-CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC---------------HH----HHHHHHTTSEEE
T ss_pred HHHHHcC-CCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCC---------------HH----HHHHHHHhCCcE
Confidence 3444433 456666553221133334566677788999999985311 11 244455443344
Q ss_pred EEEEECCC------CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 221 VWAKMTPN------ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 221 v~vKl~~~------~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
+...++.. ...+..+++...+.|++|+++..+. .+.+++
T Consensus 104 vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~-----------------------------------~~~i~~ 148 (208)
T 2czd_A 104 MVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTR-----------------------------------PERIGY 148 (208)
T ss_dssp EECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSS-----------------------------------THHHHH
T ss_pred EEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCC-----------------------------------hHHHHH
Confidence 44333211 1123456778889999998655431 123455
Q ss_pred HHHHhhccCCCCCceEEEecCCCC-HHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 295 IAKMMKSEFNDKDYSLSGIGGVET-GGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~GGI~s-~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+++.++ .-+++..|||.. +.++.+++.+||+.+.+||+++..
T Consensus 149 lr~~~~------~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 149 IRDRLK------EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA 191 (208)
T ss_dssp HHHHSC------TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS
T ss_pred HHHhCC------CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC
Confidence 666653 224679999985 448999999999999999999974
No 151
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=98.12 E-value=0.00035 Score=67.38 Aligned_cols=224 Identities=12% Similarity=0.137 Sum_probs=133.0
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+... .++-..+.+.++||-++-+.+.+.- ....|++..+.+ +.++.+
T Consensus 22 ~~i~~~~a---~D~~sA~l~e~aGf~ai~vs~~s~a-----------------------~~~~G~pD~~~v---t~~em~ 72 (298)
T 3eoo_A 22 QPLQVVGA---ITAYAAKMAEAVGFKAVYLSGGGVA-----------------------ANSLGIPDLGIS---TMDDVL 72 (298)
T ss_dssp SSEEEEEC---SSHHHHHHHHHHTCSCEEECHHHHH-----------------------HHTTCCCSSSCC---CHHHHH
T ss_pred CcEEEecC---CCHHHHHHHHHcCCCEEEECcHHHH-----------------------HHhcCCCCCCCC---CHHHHH
Confidence 35544333 3466666677789988877654321 012344544433 388888
Q ss_pred HHHHHHHhhCCCCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccC-----CCCCCCccccccccccChhHHHHHHH
Q 014581 138 KEFKQLKALYPDKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFS-----CPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~s-----cP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
..++.+.+.. +.||++-+-.|+ +++...+.+++++++|+.+|.|.=. |.|.. |..+....+.+.+|..
T Consensus 73 ~~~~~I~r~~-~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~-----gk~l~~~~e~~~ri~A 146 (298)
T 3eoo_A 73 VDANRITNAT-NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRP-----GKECVPAGEMVDRIKA 146 (298)
T ss_dssp HHHHHHHHHC-CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCC-----CCCBCCHHHHHHHHHH
T ss_pred HHHHHHHhhc-CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCC-----CCeecCHHHHHHHHHH
Confidence 8888887765 789999886555 6777888899999999999988532 32321 2223233334444433
Q ss_pred HHhhccCcc--EEEEECCC----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 212 WINAKATVP--VWAKMTPN----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 212 ~vr~~~~iP--v~vKl~~~----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
++....+.+ |+.+.-.. +++..+=+++..++|||.|.+....
T Consensus 147 a~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~~-------------------------------- 194 (298)
T 3eoo_A 147 AVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMK-------------------------------- 194 (298)
T ss_dssp HHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC--------------------------------
T ss_pred HHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCCC--------------------------------
Confidence 333222334 44443221 1123445666889999999665320
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEe---cCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGI---GGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~---GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~ 360 (422)
..+.++++.+.+ ++|+.++ +|-.-.-+..+.-.+|...|.++..++..-.. -+.+.++.+.+.
T Consensus 195 --~~ee~~~~~~~~-------~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~---a~~~~~~~i~~~ 260 (298)
T 3eoo_A 195 --TLDDYRRFKEAV-------KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRAMNK---AALNFYETVRRD 260 (298)
T ss_dssp --SHHHHHHHHHHH-------CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHH---HHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHc-------CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHH---HHHHHHHHHHHc
Confidence 135566777777 5777664 44322234566777899999999888865333 333444444443
No 152
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.11 E-value=4.6e-05 Score=76.44 Aligned_cols=153 Identities=16% Similarity=0.003 Sum_probs=108.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..+++...+++++.+.++++.+.|++.++++++++ +++. .+++++||+.+ ++||.++.+.
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~-~e~v~avr~a~g~d~~l~vDan~ 217 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPVA--------------DDGP-AAEIANLRQVLGPQAKIAADMHW 217 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGC--------------TTCH-HHHHHHHHHHHCTTSEEEEECCS
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCC--------------ChHH-HHHHHHHHHHhCCCCEEEEECCC
Confidence 47777663124788999999988889999999998652 2345 67788888865 7899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 218 ~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------ 258 (388)
T 2nql_A 218 NQTPERALELIAEMQPFDPWFAE----------------APVW-----------------TEDIAGLEKVSKNT------ 258 (388)
T ss_dssp CSCHHHHHHHHHHHGGGCCSCEE----------------CCSC-----------------TTCHHHHHHHHTSC------
T ss_pred CCCHHHHHHHHHHHhhcCCCEEE----------------CCCC-----------------hhhHHHHHHHHhhC------
Confidence 554 356778888888887652 1211 11234455566554
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++||++.+.+.+.+++.+++..| +|+|++-..- .|+.-..++. ++.+++|+
T Consensus 259 -~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~--GGit~~~~i~----~~A~~~g~ 310 (388)
T 2nql_A 259 -DVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH--KGITNFIRIG----ALAAEHGI 310 (388)
T ss_dssp -CSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH--HCHHHHHHHH----HHHHHHTC
T ss_pred -CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC--CCHHHHHHHH----HHHHHcCC
Confidence 79999999999999999999876 8999997655 4565554443 34455565
No 153
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.11 E-value=1.2e-05 Score=75.04 Aligned_cols=88 Identities=17% Similarity=0.158 Sum_probs=68.7
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++++.+.++|++.|.+...... ..+. +.. ..++++++.. ++|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~--------------------~~~~------~~~-~~i~~i~~~~-------~ipv 77 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAA--------------------FGRG------SNH-ELLAEVVGKL-------DVQV 77 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHH--------------------TTSC------CCH-HHHHHHHHHC-------SSEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccc--------------------ccCC------ChH-HHHHHHHHhc-------CCcE
Confidence 6788999999999999988742110 0010 112 5677787765 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+..|||.+++++.+++.+|||.|.+++.++.+ |..+.++.+.
T Consensus 78 ~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~-p~~~~~~~~~ 119 (244)
T 2y88_A 78 ELSGGIRDDESLAAALATGCARVNVGTAALEN-PQWCARVIGE 119 (244)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHHC-HHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEECchHhhC-hHHHHHHHHH
Confidence 99999999999999999999999999999988 7776666554
No 154
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.09 E-value=0.00019 Score=65.40 Aligned_cols=96 Identities=15% Similarity=0.110 Sum_probs=68.6
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..+.++.+...|+..+.+.+.... |...|. .++.++++++.. ++||
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~---------------------g~~~g~-----~~~~i~~~~~~~-------~~Pv 177 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKSGY-----DTEMIRFVRPLT-------TLPI 177 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTT---------------------TCCSCC-----CHHHHHHHGGGC-------CSCE
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCC---------------------Cccccc-----cHHHHHHHHHhc-------CCCE
Confidence 3567888888899887876653110 111121 145666666543 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
|++||+.+++++.+++.+||++|.+||+++.+ +.-++++++ ++.+.|+.
T Consensus 178 ia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~-~~~~~~~~~----~l~~~~~~ 226 (237)
T 3cwo_X 178 IASGGAGKMEHFLEAFLAGADAALAASVFHFR-EIDVRELKE----YLKKHGVN 226 (237)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEEEESHHHHTT-SSCHHHHHH----HHHTTTCC
T ss_pred EecCCCCCHHHHHHHHHcCcHHHhhhHHHHcC-CCCHHHHHH----HHHHCCCc
Confidence 99999999999999999999999999999876 555555544 45667763
No 155
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.09 E-value=1.5e-05 Score=74.51 Aligned_cols=88 Identities=20% Similarity=0.200 Sum_probs=68.8
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++++.+.++|+|.|.+...... ..+. +.. ..++++++.. ++|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~--------------------~~~~------~~~-~~i~~i~~~~-------~ipv 78 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAA--------------------FGTG------DNR-ALIAEVAQAM-------DIKV 78 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHH--------------------HTSC------CCH-HHHHHHHHHC-------SSEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchh--------------------hcCC------ChH-HHHHHHHHhc-------CCcE
Confidence 7889999999999999987752110 0010 112 5677777765 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+..|||.+++++.+++.+|||.|.+++..+.+ |..+.++.+.
T Consensus 79 ~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~-p~~~~~~~~~ 120 (244)
T 1vzw_A 79 ELSGGIRDDDTLAAALATGCTRVNLGTAALET-PEWVAKVIAE 120 (244)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHHC-HHHHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECchHhhC-HHHHHHHHHH
Confidence 99999999999999999999999999999988 7777666554
No 156
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.06 E-value=8.3e-05 Score=73.64 Aligned_cols=155 Identities=9% Similarity=-0.006 Sum_probs=109.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..+++ ..+++++.+.++++.+.|++.++++++|+ +++...+++++||+.+ ++||.++.+.
T Consensus 134 vp~~~~~g-~~~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 198 (359)
T 1mdl_A 134 VQAYDSHS-LDGVKLATERAVTAAELGFRAVKTRIGYP--------------ALDQDLAVVRSIRQAVGDDFGIMVDYNQ 198 (359)
T ss_dssp EEEEEECC-SCHHHHHHHHHHHHHHTTCSEEEEECCCS--------------SHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeeecC-CCCHHHHHHHHHHHHHcCCCEEEEecCCC--------------CHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 56766653 24678888888888888999999998753 2345567888888876 7899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~~------ 239 (359)
T 1mdl_A 199 SLDVPAAIKRSQALQQEGVTWIE----------------EPTL-----------------QHDYEGHQRIQSKL------ 239 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCEE----------------CCSC-----------------TTCHHHHHHHHHTC------
T ss_pred CCCHHHHHHHHHHHHHhCCCeEE----------------CCCC-----------------hhhHHHHHHHHHhC------
Confidence 654 356778888888888652 1211 11244556677654
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|+|++-..-+ .|..-..++ .++.+++|+.
T Consensus 240 -~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i----~~~A~~~g~~ 293 (359)
T 1mdl_A 240 -NVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKI-GGVTGWIRA----SALAQQFGIP 293 (359)
T ss_dssp -SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTT-THHHHHHHH----HHHHHHTTCC
T ss_pred -CCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhh-CCHHHHHHH----HHHHHHcCCe
Confidence 79999999999999999999876 89999875543 234433333 3455667764
No 157
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.06 E-value=0.00017 Score=72.52 Aligned_cols=158 Identities=15% Similarity=0.082 Sum_probs=109.9
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccCh-hHHHHHHHHHhhcc--CccEEEEE
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC-RLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~-~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
..|+.+++....+++++.+.++++.+.|++.|+++. ||- |. ++ +...+++++||+.+ +++|.++.
T Consensus 133 ~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv-------G~----~~~~~~~e~v~avr~a~G~d~~l~vDa 200 (401)
T 2hzg_A 133 GKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI-------GR----GTVAADADQIMAAREGLGPDGDLMVDV 200 (401)
T ss_dssp CBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT-------TS----SCHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred ceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC-------CC----CHHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 357776664345789999988888888999999996 553 21 34 55667888888876 78999998
Q ss_pred CCCC--C--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH-Hhh
Q 014581 226 TPNI--T--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK-MMK 300 (422)
Q Consensus 226 ~~~~--~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~-~~~ 300 (422)
...+ + +..++++.+.+.|++.|. +|.+ +..++..+++++ .+
T Consensus 201 n~~~~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~~- 246 (401)
T 2hzg_A 201 GQIFGEDVEAAAARLPTLDAAGVLWLE----------------EPFD-----------------AGALAAHAALAGRGA- 246 (401)
T ss_dssp TTTTTTCHHHHHTTHHHHHHTTCSEEE----------------CCSC-----------------TTCHHHHHHHHTTCC-
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------ccCHHHHHHHHhhCC-
Confidence 8766 4 345678888889988662 1211 112344455665 44
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 301 SEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 301 ~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++||++.+.+.+.+++.+++..| +|+|++-.... .|+.-..++. ++.+++|+
T Consensus 247 ------~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~ 299 (401)
T 2hzg_A 247 ------RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRI-GGLGPAKRVA----DAAQARGI 299 (401)
T ss_dssp ------SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHH-TSHHHHHHHH----HHHHHHTC
T ss_pred ------CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchh-CCHHHHHHHH----HHHHHcCC
Confidence 79999999999999999999876 89999975544 2344444433 33445554
No 158
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=98.05 E-value=0.00057 Score=66.42 Aligned_cols=213 Identities=10% Similarity=0.081 Sum_probs=130.1
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+.. . .++-..+.+.++||-++-+.+...- ....|++..+.+ ++++++
T Consensus 39 ~~i~~~~-a--yD~~sA~i~e~aGfdai~vs~~~~a-----------------------~~~lG~pD~~~v---t~~em~ 89 (318)
T 1zlp_A 39 GSVLMPG-V--QDALSAAVVEKTGFHAAFVSGYSVS-----------------------AAMLGLPDFGLL---TTTEVV 89 (318)
T ss_dssp SSEEEEE-E--CSHHHHHHHHHTTCSEEEECHHHHH-----------------------HHHHCCCSSSCS---CHHHHH
T ss_pred CcEEEec-C--CCHHHHHHHHHcCCCEEEECcHHHh-----------------------hHhcCCCCCCCC---CHHHHH
Confidence 3554433 3 3577777778899998887764220 012355554433 388999
Q ss_pred HHHHHHHhhCCCCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCccccccccccChhHHHHHHHHHhh
Q 014581 138 KEFKQLKALYPDKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
..++.+.+..++.||++-+-.++ +++...+.+++++++|+++|.|.=.. |....+. .|..+....+.+. -++++++
T Consensus 90 ~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~-~gk~L~p~~e~~~-rI~Aa~~ 167 (318)
T 1zlp_A 90 EATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHM-RGKAVVPAEEHAL-KIAAARE 167 (318)
T ss_dssp HHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSS-SCCCBCCHHHHHH-HHHHHHH
T ss_pred HHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCC-CCCccCCHHHHHH-HHHHHHH
Confidence 98988888766899999886554 67788889999999999999885321 2211000 1222322223333 3333333
Q ss_pred cc---CccEEEEECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 216 KA---TVPVWAKMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 216 ~~---~iPv~vKl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
+. +.-|..|.-... ++..+-++++.++|||.|.+... . +
T Consensus 168 A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-~---------------------------------~ 213 (318)
T 1zlp_A 168 AIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAP-A---------------------------------N 213 (318)
T ss_dssp HHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-C---------------------------------S
T ss_pred hcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC-C---------------------------------C
Confidence 32 334555542211 23455677889999999976531 0 1
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEe---cCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGI---GGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~---GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.+.++++.+.+ ++|+.++ +|-...-+..++-.+|...|.++..++..
T Consensus 214 ~e~~~~i~~~l-------~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 263 (318)
T 1zlp_A 214 VDELKEVSAKT-------KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYA 263 (318)
T ss_dssp HHHHHHHHHHS-------CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHHhc-------CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 24566777776 7898543 43222234667778999999999988865
No 159
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.05 E-value=0.00012 Score=73.00 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=109.9
Q ss_pred CeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++.. ..+++++.+.++++.+.|++.+.++++++ +++...+++++||+.+ ++||.++.+
T Consensus 134 v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~G~d~~l~vDan 199 (371)
T 2ovl_A 134 VPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRP--------------DLKEDVDRVSALREHLGDSFPLMVDAN 199 (371)
T ss_dssp EEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCS--------------SHHHHHHHHHHHHHHHCTTSCEEEECT
T ss_pred eeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCC--------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 456555421 13788898888888888999999998764 2345567788888876 789999987
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 200 ~~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~----- 241 (371)
T 2ovl_A 200 MKWTVDGAIRAARALAPFDLHWIE----------------EPTI-----------------PDDLVGNARIVRES----- 241 (371)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHH-----
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhhC-----
Confidence 6654 356778888888888662 1211 11245556777776
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.|++-..-+ .|+.-..++. ++.+++|+.
T Consensus 242 --~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~----~~A~~~gi~ 295 (371)
T 2ovl_A 242 --GHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNI-GGYTTFRKVA----ALAEANNML 295 (371)
T ss_dssp --CSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTT-TSHHHHHHHH----HHHHHTTCC
T ss_pred --CCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcccc-CCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999876 89999876544 2354444443 345566664
No 160
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.03 E-value=6.7e-05 Score=69.63 Aligned_cols=133 Identities=13% Similarity=0.224 Sum_probs=87.4
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.|+++++.+|+..+.+... .+.++ ++.+.++|||++- .|+. ++ ++++..++ .+
T Consensus 58 ~i~~l~~~~~~l~vgaGtv--l~~d~----~~~A~~aGAd~v~----~p~~------------d~----~v~~~ar~-~g 110 (224)
T 1vhc_A 58 AIRLLRANRPDFLIAAGTV--LTAEQ----VVLAKSSGADFVV----TPGL------------NP----KIVKLCQD-LN 110 (224)
T ss_dssp HHHHHHHHCTTCEEEEESC--CSHHH----HHHHHHHTCSEEE----CSSC------------CH----HHHHHHHH-TT
T ss_pred HHHHHHHhCcCcEEeeCcE--eeHHH----HHHHHHCCCCEEE----ECCC------------CH----HHHHHHHH-hC
Confidence 4566677777766666553 24544 4556667999993 3442 22 23444444 46
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
.|+++- ..+..+ +..+.+.|+|.|.++. .. ..|| ++.++++++.
T Consensus 111 ~~~i~G----v~t~~e-~~~A~~~Gad~vk~Fp---a~------------------~~gG----------~~~lk~l~~~ 154 (224)
T 1vhc_A 111 FPITPG----VNNPMA-IEIALEMGISAVKFFP---AE------------------ASGG----------VKMIKALLGP 154 (224)
T ss_dssp CCEECE----ECSHHH-HHHHHHTTCCEEEETT---TT------------------TTTH----------HHHHHHHHTT
T ss_pred CCEEec----cCCHHH-HHHHHHCCCCEEEEee---Cc------------------cccC----------HHHHHHHHhh
Confidence 777652 334444 5677899999998732 10 0122 3566777776
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHh-CCCEEEEhhHHHhh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILL-GANTVQVCTGVMMH 342 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~a-GAd~V~vgtall~~ 342 (422)
++ ++|+++.|||. .+++.+++.+ |+++|. +|+++..
T Consensus 155 ~~------~ipvvaiGGI~-~~N~~~~l~agga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 155 YA------QLQIMPTGGIG-LHNIRDYLAIPNIVACG-GSWFVEK 191 (224)
T ss_dssp TT------TCEEEEBSSCC-TTTHHHHHTSTTBCCEE-ECGGGCH
T ss_pred CC------CCeEEEECCcC-HHHHHHHHhcCCCEEEE-EchhcCc
Confidence 53 79999999994 7999999998 999999 9988753
No 161
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.03 E-value=5.4e-05 Score=69.63 Aligned_cols=134 Identities=14% Similarity=0.187 Sum_probs=87.8
Q ss_pred HHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc
Q 014581 137 LKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216 (422)
Q Consensus 137 l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~ 216 (422)
++.|+.+++++|+..|++--. .+.++ ++.+.++|+++|. +|+. +++ +++..++.
T Consensus 52 ~~~I~~l~~~~p~~~IGAGTV--lt~~~----a~~ai~AGA~fiv----sP~~------------~~e----vi~~~~~~ 105 (217)
T 3lab_A 52 LAAISAIKKAVPEAIVGAGTV--CTADD----FQKAIDAGAQFIV----SPGL------------TPE----LIEKAKQV 105 (217)
T ss_dssp HHHHHHHHHHCTTSEEEEECC--CSHHH----HHHHHHHTCSEEE----ESSC------------CHH----HHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEeeccc--cCHHH----HHHHHHcCCCEEE----eCCC------------cHH----HHHHHHHc
Confidence 345777788887765655432 35544 5666778999995 3553 233 33333332
Q ss_pred cCc------cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 217 ATV------PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 217 ~~i------Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
++ |++- +.....+ +..+.++|+|.|.++- . ...|| ..
T Consensus 106 -~v~~~~~~~~~P----G~~TptE-~~~A~~~Gad~vK~FP---a------------------~~~gG----------~~ 148 (217)
T 3lab_A 106 -KLDGQWQGVFLP----GVATASE-VMIAAQAGITQLKCFP---A------------------SAIGG----------AK 148 (217)
T ss_dssp -HHHCSCCCEEEE----EECSHHH-HHHHHHTTCCEEEETT---T------------------TTTTH----------HH
T ss_pred -CCCccCCCeEeC----CCCCHHH-HHHHHHcCCCEEEECc---c------------------ccccC----------HH
Confidence 56 8874 3333444 5567899999997642 1 01122 25
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
.++.++.-++ ++|+++.|||. ++++.+++.+||.++..||.+.
T Consensus 149 ~lkal~~p~p------~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 149 LLKAWSGPFP------DIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp HHHHHHTTCT------TCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred HHHHHHhhhc------CceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 6667776553 79999999998 8999999999999887776654
No 162
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.00 E-value=0.00019 Score=65.93 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=96.5
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
..|+++=+. ..++++...+++.+.+.|++.||+-+..|+. .+.++.+++....+++-= .+
T Consensus 12 ~~~vi~Vir-~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a-----------------~~~I~~l~~~~p~~~IGA--GT 71 (217)
T 3lab_A 12 TKPLIPVIV-IDDLVHAIPMAKALVAGGVHLLEVTLRTEAG-----------------LAAISAIKKAVPEAIVGA--GT 71 (217)
T ss_dssp SCSEEEEEC-CSCGGGHHHHHHHHHHTTCCEEEEETTSTTH-----------------HHHHHHHHHHCTTSEEEE--EC
T ss_pred hCCEEEEEE-cCCHHHHHHHHHHHHHcCCCEEEEeCCCccH-----------------HHHHHHHHHHCCCCeEee--cc
Confidence 457888786 5788899999999999999999998866542 245556666553333311 23
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCc
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDY 308 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~i 308 (422)
+.+ .+-++.+.++|+++|+.-+. + | +.++..++. ++
T Consensus 72 Vlt-~~~a~~ai~AGA~fivsP~~-------~-------------------------~---evi~~~~~~--------~v 107 (217)
T 3lab_A 72 VCT-ADDFQKAIDAGAQFIVSPGL-------T-------------------------P---ELIEKAKQV--------KL 107 (217)
T ss_dssp CCS-HHHHHHHHHHTCSEEEESSC-------C-------------------------H---HHHHHHHHH--------HH
T ss_pred ccC-HHHHHHHHHcCCCEEEeCCC-------c-------------------------H---HHHHHHHHc--------CC
Confidence 444 66789999999999863221 1 1 233333332 56
Q ss_pred ------eEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 309 ------SLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 309 ------pIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
|++- |+.|++++.+++.+|||.|.+.-+-...|+.+++.+..
T Consensus 108 ~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~ 155 (217)
T 3lab_A 108 DGQWQGVFLP--GVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSG 155 (217)
T ss_dssp HCSCCCEEEE--EECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHT
T ss_pred CccCCCeEeC--CCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHh
Confidence 7777 89999999999999999999876544446777776653
No 163
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.00 E-value=0.00036 Score=65.45 Aligned_cols=150 Identities=12% Similarity=0.115 Sum_probs=94.6
Q ss_pred HHHHHhhCCCCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-
Q 014581 140 FKQLKALYPDKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA- 217 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~- 217 (422)
++++.+.. ..| +++++|. +.++ ++.+-++|+|-+.+|-. .-.+|+.+.++.+..-...
T Consensus 67 i~~i~~~~-~~p--l~vGGGIrs~e~----~~~~l~~GadkVii~t~-------------a~~~p~li~e~~~~~g~q~i 126 (243)
T 4gj1_A 67 IEKLAKEV-SVN--LQVGGGIRSKEE----VKALLDCGVKRVVIGSM-------------AIKDATLCLEILKEFGSEAI 126 (243)
T ss_dssp HHHHHHHC-CSE--EEEESSCCCHHH----HHHHHHTTCSEEEECTT-------------TTTCHHHHHHHHHHHCTTTE
T ss_pred HHHHHHhc-CCC--eEeccccccHHH----HHHHHHcCCCEEEEccc-------------cccCCchHHHHHhcccCceE
Confidence 44454443 444 5565554 4444 34455679999999842 1257788888877653221
Q ss_pred CccEEEEECCC----------C--CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 218 TVPVWAKMTPN----------I--TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 218 ~iPv~vKl~~~----------~--~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
-+-+-+|...+ . .+..++++.+.+.|+..|.+++ +|-+ |-.+|+.
T Consensus 127 v~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~-------Id~D--------------Gt~~G~d-- 183 (243)
T 4gj1_A 127 VLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTD-------ISKD--------------GTMQGVN-- 183 (243)
T ss_dssp EEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEE-------TTC-------------------CCC--
T ss_pred EEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeee-------eccc--------------ccccCCC--
Confidence 11111221111 1 1367889999999999988774 2211 2233332
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++.++.+++.++ ++|||++||+.+.+|+.+. ..++++|.+|++|+..
T Consensus 184 ---~~l~~~l~~~~~------~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~g 230 (243)
T 4gj1_A 184 ---VRLYKLIHEIFP------NICIQASGGVASLKDLENL-KGICSGVIVGKALLDG 230 (243)
T ss_dssp ---HHHHHHHHHHCT------TSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHTT
T ss_pred ---HHHHHHHHHhcC------CCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHCC
Confidence 466777877653 6999999999999999874 6789999999998764
No 164
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=97.95 E-value=0.00055 Score=68.26 Aligned_cols=162 Identities=12% Similarity=0.147 Sum_probs=113.7
Q ss_pred CeEEEEeC-C------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--Ccc
Q 014581 150 KILIASIM-E------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVP 220 (422)
Q Consensus 150 ~pvi~si~-~------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iP 220 (422)
.|+.+++. + ..+++++.+.++++.+.|++.+.++++++.. + .. .+++...+++++||+.+ +++
T Consensus 131 vp~~~~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~------~-~~-~~~~~~~e~v~avr~a~g~d~~ 202 (382)
T 1rvk_A 131 VLAYGSIMCGDELEGGLATPEDYGRFAETLVKRGYKGIKLHTWMPPV------S-WA-PDVKMDLKACAAVREAVGPDIR 202 (382)
T ss_dssp EEEEEEECCCCCCTTTTSSHHHHHHHHHHHHHHTCSEEEEECCCTTS------T-TC-CCHHHHHHHHHHHHHHHCTTSE
T ss_pred ceecEEeccCccccccCCCHHHHHHHHHHHHHCCCCEEEEcCCcCcc------c-cc-cchHHHHHHHHHHHHHhCCCCe
Confidence 46665553 2 2578889888888888899999999987532 1 22 36677778899999876 789
Q ss_pred EEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 221 VWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 221 v~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
|.++....++ +..++++.+.+.|++.|. +|.+ +..++..+++++.
T Consensus 203 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~ 249 (382)
T 1rvk_A 203 LMIDAFHWYSRTDALALGRGLEKLGFDWIE----------------EPMD-----------------EQSLSSYKWLSDN 249 (382)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTTCSEEE----------------CCSC-----------------TTCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCEEe----------------CCCC-----------------hhhHHHHHHHHhh
Confidence 9999876554 345778888888888662 1211 1123455667776
Q ss_pred hhccCCCCCceEEEecCCCC-HHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 299 MKSEFNDKDYSLSGIGGVET-GGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s-~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+ ++||++.+.+.+ .+++.+++..| +|.|++--.-. .|..-..++ .++.+++|+.
T Consensus 250 ~-------~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 305 (382)
T 1rvk_A 250 L-------DIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDV-GGITPALKT----MHLAEAFGME 305 (382)
T ss_dssp C-------SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCC
T ss_pred C-------CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhc-CCHHHHHHH----HHHHHHcCCe
Confidence 5 799999999999 99999999876 79999865443 234333333 3455667664
No 165
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.94 E-value=0.0013 Score=63.45 Aligned_cols=217 Identities=9% Similarity=0.077 Sum_probs=123.1
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+.+-+. ..+.|+++.+.+ +.++++..++.+.+..
T Consensus 27 ~D~~sA~~~~~aG~~ai~vsg~~~------------------------a~~lG~pD~~~v---t~~em~~~~~~I~~~~- 78 (295)
T 1s2w_A 27 HNGLSARIVQEAGFKGIWGSGLSV------------------------SAQLGVRDSNEA---SWTQVVEVLEFMSDAS- 78 (295)
T ss_dssp CSHHHHHHHHHHTCSCEEECCHHH------------------------HHTC------------CHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcCCCEEEeChHHH------------------------HHhCCCCCCCCC---CHHHHHHHHHHHHhcC-
Confidence 356667777788998887775332 112344443432 3678888888887754
Q ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCcccc-ccccccChhHHHHHHHHHhhcc---CccEE
Q 014581 149 DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERKM-GAAVGQDCRLLEEVCGWINAKA---TVPVW 222 (422)
Q Consensus 149 ~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~~-G~~l~~~~~~v~~iv~~vr~~~---~iPv~ 222 (422)
+.||++-+-.|+ +++...+.+++++++|+++|.|.=.. |....+.+. +..+....+.+.+ +++++++. +.-|.
T Consensus 79 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~r-I~Aa~~a~~~~~~~i~ 157 (295)
T 1s2w_A 79 DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALK-IKACKDSQTDPDFCIV 157 (295)
T ss_dssp SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHH-HHHHHHHCSSTTCEEE
T ss_pred CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHH-HHHHHHhcccCCcEEE
Confidence 789998885454 56677888999999999999886331 221000000 0112222223333 33333332 34455
Q ss_pred EEECCCC-----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 223 AKMTPNI-----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 223 vKl~~~~-----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
.|.-... .+..+-++++.++|||.|.+...... .+.++++.+
T Consensus 158 aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~---------------------------------~~~~~~i~~ 204 (295)
T 1s2w_A 158 ARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKAD---------------------------------PSDIEAFMK 204 (295)
T ss_dssp EEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSS---------------------------------SHHHHHHHH
T ss_pred EeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCC---------------------------------HHHHHHHHH
Confidence 6654331 23556678889999999977532110 134556777
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
.++. .+|++++-+-...-++.++-.+|...|.++..++..-...+.+..+
T Consensus 205 ~~~~-----~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~ 254 (295)
T 1s2w_A 205 AWNN-----QGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRASVSAIQQTTK 254 (295)
T ss_dssp HHTT-----CSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHHHHHHHHHHHH
T ss_pred HcCC-----CCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHHHHHHHHHHHH
Confidence 7632 4899987432111236677789999999999888653333333333
No 166
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=97.93 E-value=0.00012 Score=73.07 Aligned_cols=151 Identities=11% Similarity=0.029 Sum_probs=106.6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..++. ..+++++.+.++++.++|++.|++++++ +++...+++++||+.+ ++||.++.+.
T Consensus 135 v~~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAP-QRSEAETRAELARHRAAGYRQFQIKVGA---------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECC-CSCSHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEec-CCCHHHHHHHHHHHHHcCCCEEEEeccC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 45666664 3468889999998888999999999754 2455678899999887 6899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|+ .|. +|. + .++..+++++.+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE----------------~P~------------------~-~~~~~~~l~~~~------ 236 (379)
T 2rdx_A 199 GWRVDNAIRLARATRDLDY-ILE----------------QPC------------------R-SYEECQQVRRVA------ 236 (379)
T ss_dssp CSCHHHHHHHHHHTTTSCC-EEE----------------CCS------------------S-SHHHHHHHHTTC------
T ss_pred CCCHHHHHHHHHHHHhCCe-EEe----------------CCc------------------C-CHHHHHHHHhhC------
Confidence 554 24566777777776 541 111 1 134455566654
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++--... .|+.-..++. ++.+++|+.
T Consensus 237 -~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~~ 290 (379)
T 2rdx_A 237 -DQPMKLDECVTGLHMAQRIVADRGAEICCLKISNL-GGLSKARRTR----DFLIDNRMP 290 (379)
T ss_dssp -CSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTT-TSHHHHHHHH----HHHHHTTCC
T ss_pred -CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999876 89999976544 2344444433 345566765
No 167
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.93 E-value=1.7e-05 Score=83.39 Aligned_cols=93 Identities=18% Similarity=0.204 Sum_probs=70.7
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++|+.+.+.|++++++.+-.. ..+|+..++..++.|+++++.+ .+||
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~-----------------------~~~~~~~~~~~~~~i~~i~~~~-------~ipi 330 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITS-----------------------FRDCPLKDTPMLEVLKQAAKTV-------FVPL 330 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC--------------------------CCCGGGCHHHHHHHHHTTTC-------CSCE
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCc-----------------------cccccCCCchHHHHHHHHHhhC-------CCcE
Confidence 578899999999999999886321 1223333455677777776654 7999
Q ss_pred EEecCCCCH-----------HHHHHHHHhCCCEEEEhhHHHhh------------hhHHHHHHHHH
Q 014581 311 SGIGGVETG-----------GDAAEFILLGANTVQVCTGVMMH------------GYGLVKRLCEE 353 (422)
Q Consensus 311 Ia~GGI~s~-----------~da~~~l~aGAd~V~vgtall~~------------Gp~~i~~i~~~ 353 (422)
+..|||++. +++.+++.+|||.|.++|..+.+ .|++++++.+.
T Consensus 331 ~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 396 (555)
T 1jvn_A 331 TVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKA 396 (555)
T ss_dssp EEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHH
T ss_pred EEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHH
Confidence 999999998 55999999999999999999875 25666666554
No 168
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=97.93 E-value=0.0013 Score=63.11 Aligned_cols=223 Identities=14% Similarity=0.128 Sum_probs=132.2
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+++.+.. +..|+++.+.+ ++++++..++.+.+..
T Consensus 23 ~D~~sA~~~~~aG~~ai~vs~~~~a------------------------~~~G~pD~~~v---t~~em~~~~~~I~~~~- 74 (290)
T 2hjp_A 23 HNPLVAKLAEQAGFGGIWGSGFELS------------------------ASYAVPDANIL---SMSTHLEMMRAIASTV- 74 (290)
T ss_dssp SSHHHHHHHHHHTCSEEEECHHHHH------------------------HHTTSCTTTCS---CHHHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHcCCCEEEEChHHHH------------------------HhCCCCCCCCC---CHHHHHHHHHHHHhcC-
Confidence 3577777778899998888753321 11344544433 3889999898888765
Q ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCccc-cccccccChhHHHHHHHHHhhc---cCccEE
Q 014581 149 DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERK-MGAAVGQDCRLLEEVCGWINAK---ATVPVW 222 (422)
Q Consensus 149 ~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~-~G~~l~~~~~~v~~iv~~vr~~---~~iPv~ 222 (422)
+.||++-+-.|+ +++...+.+++++++|+++|.|.=.. |....+.+ .|..+....+.+.+ +++++++ .+.-|.
T Consensus 75 ~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~k-I~Aa~~a~~~~~~~i~ 153 (290)
T 2hjp_A 75 SIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGK-IAAATAARADRDFVVI 153 (290)
T ss_dssp SSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHH-HHHHHHHCSSTTSEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHH-HHHHHHhcccCCcEEE
Confidence 789988875454 67788889999999999999886332 22110000 01122222223333 3333333 234466
Q ss_pred EEECCC-----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 223 AKMTPN-----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 223 vKl~~~-----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
.|.-.. +.+..+-++++.++|||.|.+..+... .+.++++.+
T Consensus 154 aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~---------------------------------~~~~~~i~~ 200 (290)
T 2hjp_A 154 ARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKT---------------------------------PDEILAFVK 200 (290)
T ss_dssp EEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSS---------------------------------SHHHHHHHH
T ss_pred EeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCC---------------------------------HHHHHHHHH
Confidence 665443 123556677889999999987652211 134566777
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHc
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMH 361 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~ 361 (422)
.++. ++|++++-.-...-++.++-.+| ...|.++..++..-.. -+.+.++.+.+..
T Consensus 201 ~~~~-----~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~raa~~---a~~~~~~~i~~~g 257 (290)
T 2hjp_A 201 SWPG-----KVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAAVG---AVREVFARIRRDG 257 (290)
T ss_dssp HCCC-----SSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHHHH---HHHHHHHHHHHHT
T ss_pred HcCC-----CCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHHHHH---HHHHHHHHHHHcC
Confidence 7732 49999862101112456667799 9999999888765333 3333444444433
No 169
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.92 E-value=0.00045 Score=64.27 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=90.8
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~ 230 (422)
++++=+. ..++++..++++.+.+.|++.||+-+..|.. .+.++.+++.....++ -. ..+.
T Consensus 35 ~vv~Vir-~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a-----------------~e~I~~l~~~~~~~~i-Ga-GTVl 94 (232)
T 4e38_A 35 KVIPVIA-IDNAEDIIPLGKVLAENGLPAAEITFRSDAA-----------------VEAIRLLRQAQPEMLI-GA-GTIL 94 (232)
T ss_dssp CEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEETTSTTH-----------------HHHHHHHHHHCTTCEE-EE-ECCC
T ss_pred CEEEEEE-cCCHHHHHHHHHHHHHCCCCEEEEeCCCCCH-----------------HHHHHHHHHhCCCCEE-eE-CCcC
Confidence 5666665 5678888999999999999999998755541 2445555554432222 21 2344
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+ .+-++.+.++|+++|+.-+ .| .+.++..++ . ++|+
T Consensus 95 t-~~~a~~Ai~AGA~fIvsP~-------~~----------------------------~~vi~~~~~-~-------gi~~ 130 (232)
T 4e38_A 95 N-GEQALAAKEAGATFVVSPG-------FN----------------------------PNTVRACQE-I-------GIDI 130 (232)
T ss_dssp S-HHHHHHHHHHTCSEEECSS-------CC----------------------------HHHHHHHHH-H-------TCEE
T ss_pred C-HHHHHHHHHcCCCEEEeCC-------CC----------------------------HHHHHHHHH-c-------CCCE
Confidence 4 6778999999999995211 11 123333333 2 6777
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+. |+.|+.++.+++.+|||.|.+.=+-...||.+++.+..
T Consensus 131 ip--Gv~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 131 VP--GVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVG 170 (232)
T ss_dssp EC--EECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHT
T ss_pred Ec--CCCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHH
Confidence 77 68999999999999999999855433346777666543
No 170
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.89 E-value=0.0011 Score=63.26 Aligned_cols=195 Identities=12% Similarity=0.158 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+.+.+. ..+.|++..+.+ +.++.+..++.+.+..
T Consensus 24 ~D~~sA~~~~~aG~~ai~vsg~s~------------------------a~~~G~pD~~~v---t~~em~~~~~~I~~~~- 75 (275)
T 2ze3_A 24 WDVASARLLEAAGFTAIGTTSAGI------------------------AHARGRTDGQTL---TRDEMGREVEAIVRAV- 75 (275)
T ss_dssp SSHHHHHHHHHHTCSCEEECHHHH------------------------HHHSCCCSSSSS---CHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHcCCCEEEECcHHH------------------------HHhCCCCCCCCC---CHHHHHHHHHHHHhhc-
Confidence 356667777778888887764322 112455554433 3889999888888765
Q ss_pred CCeEEEEeCCCC--CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc---CccEEE
Q 014581 149 DKILIASIMEEY--NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA---TVPVWA 223 (422)
Q Consensus 149 ~~pvi~si~~~~--~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~---~iPv~v 223 (422)
+.||++-+-.|| +++...+.+++++++|++++.|.=...+. |..+ .+.+...+-+++++++. ++|+.|
T Consensus 76 ~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~------~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~i 148 (275)
T 2ze3_A 76 AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLT------PTEL-YDLDSQLRRIEAARAAIDASGVPVFL 148 (275)
T ss_dssp SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSS------SSCB-CCHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCC------CCcc-CCHHHHHHHHHHHHHhHhhcCCCeEE
Confidence 689999886565 57888899999999999999886332121 1112 23344444455554442 567655
Q ss_pred EECCCC-------------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 224 KMTPNI-------------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 224 Kl~~~~-------------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
--+.+. .+..+-++++.++|||.|.+... . +.+
T Consensus 149 ~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~-~---------------------------------~~~ 194 (275)
T 2ze3_A 149 NARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLA-L---------------------------------QSQ 194 (275)
T ss_dssp EEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC-C---------------------------------CHH
T ss_pred EEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCC-C---------------------------------CHH
Confidence 444332 12344566788999999965431 0 124
Q ss_pred HHHHHHHHhhccCCCCCceEEEec--CCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIG--GVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~G--GI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
.++++.+.+ ++|+-.+. +..+ +.++-.+|...|..+..++..
T Consensus 195 ~~~~i~~~~-------~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 195 DIRALADAL-------RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHHHHHHHC-------SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred HHHHHHHhc-------CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 556777776 57765553 3444 457777999999999888765
No 171
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.89 E-value=0.00084 Score=62.16 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=80.6
Q ss_pred HHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEEC---CCCC--ChHHHHHHHHH
Q 014581 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT---PNIT--DITEPARVALR 241 (422)
Q Consensus 167 ~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~---~~~~--~~~~~a~~l~~ 241 (422)
.-++. .+.|||.|++-+. +|.-...+.+.+.+-++++++.++- ..+|.- ..++ ++...++.+.+
T Consensus 71 ~E~~~-i~~GAdEID~Vin---------ig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~e 139 (226)
T 1vcv_A 71 ALVSR-LAEVADEIDVVAP---------IGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAE 139 (226)
T ss_dssp HHHHH-HTTTCSEEEEECC---------HHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHH-HHCCCCEEEEecc---------hhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHH
Confidence 33455 5679999987652 1222234556777777777777632 245521 1222 35667788899
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH---hhccCCCCCceEEEecCCCC
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM---MKSEFNDKDYSLSGIGGVET 318 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~---~~~~~~~~~ipIIa~GGI~s 318 (422)
+|+|+|..+..+... +.++ +. ...+|- +++.++.+++. ++. +++|-++|||++
T Consensus 140 aGADfVKTSTGf~~~---~~~~--~~------~~~~gA--------t~~dv~lm~~~i~~~g~-----~v~vKaaGGirt 195 (226)
T 1vcv_A 140 AGAHFIKSSTGFAEE---AYAA--RQ------GNPVHS--------TPERAAAIARYIKEKGY-----RLGVKMAGGIRT 195 (226)
T ss_dssp HTCSEEECCCSCCCH---HHHH--HT------TCCSSC--------CHHHHHHHHHHHHHHTC-----CCEEEEESSCCS
T ss_pred cCCCEEEeCCCCCcc---cccc--cc------CCCCCC--------CHHHHHHHHHHHHHhCC-----CceEEEeCCCCC
Confidence 999999754332200 0000 00 001221 13334444444 532 699999999999
Q ss_pred HHHHHHHHHh---CCC----EEEEhh
Q 014581 319 GGDAAEFILL---GAN----TVQVCT 337 (422)
Q Consensus 319 ~~da~~~l~a---GAd----~V~vgt 337 (422)
.+|+++++.+ ||+ -+...+
T Consensus 196 ~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 196 REQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHHHHHHHHHCCCCcCCceEecCc
Confidence 9999999999 999 655544
No 172
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.86 E-value=0.00027 Score=65.52 Aligned_cols=149 Identities=13% Similarity=0.175 Sum_probs=93.1
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++++++.+|+..+.+... .+.++ ++.+.++|+|++- .|+. ++ ++++..++ .+
T Consensus 67 ~i~~l~~~~~~~~igagtv--l~~d~----~~~A~~aGAd~v~----~p~~------------d~----~v~~~~~~-~g 119 (225)
T 1mxs_A 67 AIQVLREQRPELCVGAGTV--LDRSM----FAAVEAAGAQFVV----TPGI------------TE----DILEAGVD-SE 119 (225)
T ss_dssp HHHHHHHHCTTSEEEEECC--CSHHH----HHHHHHHTCSSEE----CSSC------------CH----HHHHHHHH-CS
T ss_pred HHHHHHHhCcccEEeeCeE--eeHHH----HHHHHHCCCCEEE----eCCC------------CH----HHHHHHHH-hC
Confidence 4666667777777766553 34443 4556667999994 3442 11 23333332 36
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
+|++.- ..+..+ +..+.+.|+|.|.++ +.. ..+| ++.++.+++.
T Consensus 120 ~~~i~G----~~t~~e-~~~A~~~Gad~vk~F---Pa~------------------~~~G----------~~~lk~i~~~ 163 (225)
T 1mxs_A 120 IPLLPG----ISTPSE-IMMGYALGYRRFKLF---PAE------------------ISGG----------VAAIKAFGGP 163 (225)
T ss_dssp SCEECE----ECSHHH-HHHHHTTTCCEEEET---THH------------------HHTH----------HHHHHHHHTT
T ss_pred CCEEEe----eCCHHH-HHHHHHCCCCEEEEc---cCc------------------cccC----------HHHHHHHHhh
Confidence 676642 334444 567789999999773 210 0112 3566677766
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHH-hCCCEEEEhhHHHhhhhHH----HHHHHHHHHHHHH
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFIL-LGANTVQVCTGVMMHGYGL----VKRLCEELKDFMK 359 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~-aGAd~V~vgtall~~Gp~~----i~~i~~~l~~~m~ 359 (422)
++ ++|+++.||| +.+++.+++. +||++|. +|+++.. ..+ ++.|.+..+++++
T Consensus 164 ~~------~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~-~~i~~~~~~~i~~~a~~~~~ 220 (225)
T 1mxs_A 164 FG------DIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDS-SWIKNGDWARIEACSAEAIA 220 (225)
T ss_dssp TT------TCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCH-HHHHTTCHHHHHHHHHHHHH
T ss_pred CC------CCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCc-hhhccCCHHHHHHHHHHHHH
Confidence 53 7999999999 4889999999 7999999 9998754 211 3345454444544
No 173
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.84 E-value=0.00045 Score=63.55 Aligned_cols=149 Identities=15% Similarity=0.240 Sum_probs=92.2
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
.++++++.+++..+.+... .+.++ ++.+.++|||++- +|+. ++ ++.+..++ .+
T Consensus 57 ~i~~l~~~~~~~~vgagtv--i~~d~----~~~A~~aGAd~v~----~p~~------------d~----~v~~~~~~-~g 109 (214)
T 1wbh_A 57 AIRAIAKEVPEAIVGAGTV--LNPQQ----LAEVTEAGAQFAI----SPGL------------TE----PLLKAATE-GT 109 (214)
T ss_dssp HHHHHHHHCTTSEEEEESC--CSHHH----HHHHHHHTCSCEE----ESSC------------CH----HHHHHHHH-SS
T ss_pred HHHHHHHHCcCCEEeeCEE--EEHHH----HHHHHHcCCCEEE----cCCC------------CH----HHHHHHHH-hC
Confidence 4556666677666665442 34443 4556667999984 3442 11 23333333 36
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
.|++.- ..+..+ +..+.+.|+|.|.++. .. ..|| ++.++.+++.
T Consensus 110 ~~~i~G----~~t~~e-~~~A~~~Gad~v~~Fp---a~------------------~~gG----------~~~lk~i~~~ 153 (214)
T 1wbh_A 110 IPLIPG----ISTVSE-LMLGMDYGLKEFKFFP---AE------------------ANGG----------VKALQAIAGP 153 (214)
T ss_dssp SCEEEE----ESSHHH-HHHHHHTTCCEEEETT---TT------------------TTTH----------HHHHHHHHTT
T ss_pred CCEEEe----cCCHHH-HHHHHHCCCCEEEEec---Cc------------------cccC----------HHHHHHHhhh
Confidence 777653 233444 5677899999998732 10 0122 3566677766
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHh-CCCEEEEhhHHHhhhhHH----HHHHHHHHHHHHH
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILL-GANTVQVCTGVMMHGYGL----VKRLCEELKDFMK 359 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~a-GAd~V~vgtall~~Gp~~----i~~i~~~l~~~m~ 359 (422)
++ ++|+++.|||. .+++.+++.+ |+++|. +|+++.. +.+ ++++.+..+++++
T Consensus 154 ~~------~ipvvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~-~~~~~~~~~~i~~~a~~~~~ 210 (214)
T 1wbh_A 154 FS------QVRFCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPA-DALEAGDYDRITKLAREAVE 210 (214)
T ss_dssp CT------TCEEEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCH-HHHHHTCHHHHHHHHHHHHH
T ss_pred CC------CCeEEEECCCC-HHHHHHHHhcCCCeEEE-eccccCh-hhhhcCCHHHHHHHHHHHHH
Confidence 53 79999999995 7999999998 999999 9988754 221 2345444444544
No 174
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.82 E-value=5.9e-05 Score=70.88 Aligned_cols=91 Identities=11% Similarity=0.132 Sum_probs=72.3
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCc
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDY 308 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~i 308 (422)
..++.+.|+...+.|+|.+++..-... ..+ ++..++.++++++.+ .+
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a--------------------~~~------~~~~~~~i~~i~~~~-------~~ 76 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGA--------------------KDP------SKRQFALIEKLAKEV-------SV 76 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHH--------------------HCG------GGCCHHHHHHHHHHC-------CS
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcc--------------------ccc------chhHHHHHHHHHHhc-------CC
Confidence 347899999999999999987742111 001 123356778888776 79
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 309 SLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 309 pIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
|+-..|||++.+|+.+++.+||+-|.++|+++.+ |.+++++.+.
T Consensus 77 pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~-p~li~e~~~~ 120 (243)
T 4gj1_A 77 NLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKD-ATLCLEILKE 120 (243)
T ss_dssp EEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTC-HHHHHHHHHH
T ss_pred CeEeccccccHHHHHHHHHcCCCEEEEccccccC-CchHHHHHhc
Confidence 9999999999999999999999999999999999 8887766544
No 175
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.80 E-value=0.00059 Score=65.08 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChh---HHHHHHHHHhhccCccEEEEECCC---CCC---
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR---LLEEVCGWINAKATVPVWAKMTPN---ITD--- 231 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~---~v~~iv~~vr~~~~iPv~vKl~~~---~~~--- 231 (422)
+.+.-..-++.+.+.|||.|++-+. +|.-...+.+ .+.+-++++++.+. ...+|+--. +++
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVin---------ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~ 173 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVIN---------YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDL 173 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC---------HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc---------hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHH
Confidence 3333333445555679999987642 1222223445 67777778888764 245565322 222
Q ss_pred hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhc------cCCC
Q 014581 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKS------EFND 305 (422)
Q Consensus 232 ~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~------~~~~ 305 (422)
+...++.+.++|+|+|..+..+. .+|- +++.++.+++.+.+ +. +
T Consensus 174 i~~A~~ia~eaGADfVKTSTGf~---------------------~~gA--------T~edv~lm~~~v~~~~~~~~~t-g 223 (281)
T 2a4a_A 174 IIKTTLAVLNGNADFIKTSTGKV---------------------QINA--------TPSSVEYIIKAIKEYIKNNPEK-N 223 (281)
T ss_dssp HHHHHHHHHTTTCSEEECCCSCS---------------------SCCC--------CHHHHHHHHHHHHHHHHHCGGG-T
T ss_pred HHHHHHHHHHhCCCEEEeCCCCC---------------------CCCC--------CHHHHHHHHHHHHHhhcccccC-C
Confidence 34667888999999996432211 1121 12333344444310 00 0
Q ss_pred CCceEEEecCCCCHHHHHHHHHhCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLGAN 331 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aGAd 331 (422)
.+++|-++|||++.+|+++++.+||+
T Consensus 224 ~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 224 NKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp TCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 27999999999999999999999875
No 176
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=97.79 E-value=0.0011 Score=65.76 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=105.6
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHH-hCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEE-TGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~-aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
|+...+. ..+++++.+.++++.+ .|++.+.++++++. ++...+++++||+.+ ++++.++...
T Consensus 133 ~~~~~~~-~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~--------------~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLA-SGDTARDIDSALEMIETRRHNRFKVKLGART--------------PAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEEC-SSCHHHHHHHHHHHHHTTSCSEEEEECSSSC--------------HHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEec-CCCHHHHHHHHHHHHHhCCccEEEEecCCCC--------------hHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 4444453 3468888888888887 89999999987542 234456777777765 5889998776
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~------ 238 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVE----------------QPVP-----------------RANFGALRRLTEQN------ 238 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEE----------------CCSC-----------------TTCHHHHHHHHHHC------
T ss_pred CCCHHHHHHHHHHHHhcCcceEe----------------CCCC-----------------cccHHHHHHHHHhC------
Confidence 554 356778888899988652 1211 11234556677765
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++. ++.+++|+.
T Consensus 239 -~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~~ 292 (370)
T 1nu5_A 239 -GVAILADESLSSLSSAFELARDHAVDAFSLKLCNM-GGIANTLKVA----AVAEAAGIS 292 (370)
T ss_dssp -SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHHH----HHHHHHTCE
T ss_pred -CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhc-CCHHHHHHHH----HHHHHcCCc
Confidence 79999999999999999999876 89999865443 2344444433 344455653
No 177
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.78 E-value=0.00025 Score=66.11 Aligned_cols=126 Identities=19% Similarity=0.171 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc---CccEEEEEC---CCCC--Ch
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA---TVPVWAKMT---PNIT--DI 232 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~---~iPv~vKl~---~~~~--~~ 232 (422)
+.+.-..-++.+.+.|||.|++.+. +|.-.+ .+.+-+.++++.+ +.|+ |+- ..++ .+
T Consensus 86 ~~~~k~~e~~~Av~~GAdEID~vin---------ig~~~~----~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i 150 (234)
T 1n7k_A 86 PLEVKLVEAQTVLEAGATELDVVPH---------LSLGPE----AVYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTL 150 (234)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCC---------GGGCHH----HHHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecc---------chHHHH----HHHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHH
Confidence 3443334455555679999998652 121111 4444455555554 2554 542 2222 25
Q ss_pred HHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH--HHHHhhccCCCCCceE
Q 014581 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS--IAKMMKSEFNDKDYSL 310 (422)
Q Consensus 233 ~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~--i~~~~~~~~~~~~ipI 310 (422)
...++.+.++|+|+|..+..+. ..+| .+++.++. +++.+ ++||
T Consensus 151 ~~a~ria~eaGADfVKTsTG~~--------------------~~~g--------At~~dv~l~~m~~~v-------~v~V 195 (234)
T 1n7k_A 151 SLLVDSSRRAGADIVKTSTGVY--------------------TKGG--------DPVTVFRLASLAKPL-------GMGV 195 (234)
T ss_dssp HHHHHHHHHTTCSEEESCCSSS--------------------CCCC--------SHHHHHHHHHHHGGG-------TCEE
T ss_pred HHHHHHHHHhCCCEEEeCCCCC--------------------CCCC--------CCHHHHHHHHHHHHH-------CCCE
Confidence 5667778999999995332110 0011 12344444 66555 3899
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
-++|||++.+|+++++.+||+-+...
T Consensus 196 KaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 196 KASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred EEecCCCCHHHHHHHHHcCccccchH
Confidence 99999999999999999999944443
No 178
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.78 E-value=0.00053 Score=64.84 Aligned_cols=133 Identities=13% Similarity=0.182 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc-cEEEEECCC---CCC---hH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV-PVWAKMTPN---ITD---IT 233 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i-Pv~vKl~~~---~~~---~~ 233 (422)
+.+.-..-++.+.+.|||.|++-+. +|.-...+.+.+.+-++++++.+.. +..+|+--. +++ +.
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVin---------ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~ 153 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVFP---------YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIR 153 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC---------HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecc---------HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHH
Confidence 3333333445555679999987652 1222234556677777777776532 345665322 222 34
Q ss_pred HHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEe
Q 014581 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGI 313 (422)
Q Consensus 234 ~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~ 313 (422)
..++.+.++|+|+|..+..+. .+|- +++.++.+++.+.+..-..+++|-++
T Consensus 154 ~a~~ia~eaGADfVKTSTGf~---------------------~~gA--------t~e~v~lm~~~I~~~~~g~~v~VKaa 204 (260)
T 1p1x_A 154 KASEISIKAGADFIKTSTGKV---------------------AVNA--------TPESARIMMEVIRDMGVEKTVGFKPA 204 (260)
T ss_dssp HHHHHHHHTTCSEEECCCSCS---------------------SCCC--------CHHHHHHHHHHHHHHTCTTTCEEECB
T ss_pred HHHHHHHHhCCCEEEeCCCCC---------------------CCCC--------CHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 677888999999996432211 1221 13434444444210000127999999
Q ss_pred cCCCCHHHHHHHHHhCCC
Q 014581 314 GGVETGGDAAEFILLGAN 331 (422)
Q Consensus 314 GGI~s~~da~~~l~aGAd 331 (422)
|||++.+|+++++.+||+
T Consensus 205 GGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 205 GGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp SSCCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhhhh
Confidence 999999999999999875
No 179
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=97.78 E-value=0.00059 Score=68.95 Aligned_cols=163 Identities=10% Similarity=-0.028 Sum_probs=112.1
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
..|+.+++....+++++.+.++++.+.|++.+.+++++... + | ..+.+...+++++||+.+ +++|.|..+
T Consensus 167 ~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d-g---~~~~~~die~v~avReavG~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D-G---MPGMRENLKRVEAVREVIGYDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G-H---HHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c-c---cchHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 35788875334578999999998888999999999876421 1 1 123455667788888875 789999987
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 239 ~~~~~~~Ai~~~~~Le~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~----- 280 (412)
T 3stp_A 239 MGWNLDYAKRMLPKLAPYEPRWLE----------------EPVI-----------------ADDVAGYAELNAMN----- 280 (412)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHTC-----
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhCC-----
Confidence 6654 345678888888887762 2221 11234556677664
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.||+--.-. .|..-..++. .+.+.+|+.
T Consensus 281 --~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~-GGit~a~kia----~~A~a~gi~ 334 (412)
T 3stp_A 281 --IVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRV-GGITAAQKIN----AIAEAAQIP 334 (412)
T ss_dssp --SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH-THHHHHHHHH----HHHHHHTCC
T ss_pred --CCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhc-CCHHHHHHHH----HHHHHcCCE
Confidence 79999999999999999999976 79999875544 2343333332 344555553
No 180
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.76 E-value=5.1e-05 Score=71.78 Aligned_cols=88 Identities=11% Similarity=0.058 Sum_probs=63.9
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++++.+.++|++.|.+++.... +...| ..++.++++++.. ++||
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~---------------------~~~~g-----~~~~~i~~i~~~~-------~iPv 77 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRD---------------------GTKSG-----YDTEMIRFVRPLT-------TLPI 77 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTS---------------------SCSSC-----CCHHHHHHHGGGC-------CSCE
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcc---------------------cCCCc-----ccHHHHHHHHHhc-------CCCE
Confidence 4688999999999999998643210 11111 1246666676654 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh--hhHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMH--GYGLVKRLC 351 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~--Gp~~i~~i~ 351 (422)
+..|||.+.+|+.+++.+|||+|.++++++.. .|..++++.
T Consensus 78 i~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~ 120 (266)
T 2w6r_A 78 IASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYL 120 (266)
T ss_dssp EEESCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHC
T ss_pred EEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999999999999832 266665543
No 181
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=97.76 E-value=0.00051 Score=68.82 Aligned_cols=154 Identities=10% Similarity=0.011 Sum_probs=108.8
Q ss_pred CeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+.+++.+ ..+++++.+.++.+.+.|++.+.++++| +++.-.+++++||+.+ +++|.|+.+
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~---------------~~~~d~~~v~avR~a~g~d~~l~vDan 203 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR---------------APRKDAANLRAMRQRVGADVEILVDAN 203 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC---------------CHHHHHHHHHHHHHHcCCCceEEEECC
Confidence 578887722 4578999988888888899999999865 2344556778888775 789999987
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH-HHhhccC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA-KMMKSEF 303 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~-~~~~~~~ 303 (422)
..++ +..++++.+.+.|++.|. +|.+ |..++..++++ +..
T Consensus 204 ~~~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~~---- 246 (389)
T 3ozy_A 204 QSLGRHDALAMLRILDEAGCYWFE----------------EPLS-----------------IDDIEGHRILRAQGT---- 246 (389)
T ss_dssp TCCCHHHHHHHHHHHHHTTCSEEE----------------SCSC-----------------TTCHHHHHHHHTTCC----
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhcCC----
Confidence 7665 345778889999988772 1221 11234445566 543
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++||++.+.+.+.+|+.+++..| +|.||+--... .|..-..++ .++.+.+|+
T Consensus 247 ---~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----a~~A~~~gi 299 (389)
T 3ozy_A 247 ---PVRIATGENLYTRNAFNDYIRNDAIDVLQADASRA-GGITEALAI----SASAASAHL 299 (389)
T ss_dssp ---SSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTS-SCHHHHHHH----HHHHHHTTC
T ss_pred ---CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCC
Confidence 79999999999999999999875 89999865543 234434443 334556665
No 182
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=97.75 E-value=0.00014 Score=73.03 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=97.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCC---CccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCC--Ch
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGM---PERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DI 232 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~---~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~ 232 (422)
.+++++.+.++++.+.|++.++++++|.... +...||++...+++...+++++||+.+ +++|.+.....++ +.
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a 215 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDET 215 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 5788998888888888999999998753210 001234344455677778899998875 7899999876554 34
Q ss_pred HHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEE
Q 014581 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSG 312 (422)
Q Consensus 233 ~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa 312 (422)
.++++.+.+.|++.|. +|.+ +..++..+++++.+ ++||++
T Consensus 216 ~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~~-------~ipIa~ 255 (392)
T 2poz_A 216 IRFCRKIGELDICFVE----------------EPCD-----------------PFDNGALKVISEQI-------PLPIAV 255 (392)
T ss_dssp HHHHHHHGGGCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHC-------SSCEEE
T ss_pred HHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhhC-------CCCEEe
Confidence 5677777777766541 1211 11234556677765 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEh
Q 014581 313 IGGVETGGDAAEFILLG-ANTVQVC 336 (422)
Q Consensus 313 ~GGI~s~~da~~~l~aG-Ad~V~vg 336 (422)
.+.+.+.+++.+++..| +|.|++-
T Consensus 256 dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 256 GERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp CTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred cCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999876 7899875
No 183
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=97.75 E-value=0.00029 Score=70.97 Aligned_cols=146 Identities=11% Similarity=0.042 Sum_probs=103.0
Q ss_pred CeEEEE-eC-C-C------CCHHHHHHHHHHHHHhCCCEEEEcc------CC----CCCCCccccccccc-cChhHHHHH
Q 014581 150 KILIAS-IM-E-E------YNKAAWEELIDRVEETGIDAIEVNF------SC----PHGMPERKMGAAVG-QDCRLLEEV 209 (422)
Q Consensus 150 ~pvi~s-i~-~-~------~~~~~~~~~a~~~~~aGaD~iElN~------sc----P~~~~~~~~G~~l~-~~~~~v~~i 209 (422)
.|+..+ +. + + .+++++.+.++++.+.|++.+++++ ++ |.. .+.+|+... .+.+...++
T Consensus 130 vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~--~~~~GG~~~~~~~~~~~e~ 207 (410)
T 2gl5_A 130 LRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNR--NRNYSGLLLADQLKMGEAR 207 (410)
T ss_dssp EEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSC--CGGGGSCCCHHHHHHHHHH
T ss_pred eeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccc--cccccCccchhHHHHHHHH
Confidence 477776 64 1 2 1788999988888888999999996 33 111 123555543 355677788
Q ss_pred HHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 210 CGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 210 v~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+++||+.+ +++|.+.....++ +..++++.+.+.|++.|. +|.+
T Consensus 208 v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE----------------~P~~----------------- 254 (410)
T 2gl5_A 208 IAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE----------------EPIH----------------- 254 (410)
T ss_dssp HHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE----------------CSSC-----------------
T ss_pred HHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEE----------------CCCC-----------------
Confidence 89998876 7899999876554 345677778777766542 1211
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhh
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCT 337 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgt 337 (422)
+..++..+++++.+ ++||++.+.+.+.+++.+++..| +|.|++--
T Consensus 255 ~~~~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 300 (410)
T 2gl5_A 255 PLNSDNMQKVSRST-------TIPIATGERSYTRWGYRELLEKQSIAVAQPDL 300 (410)
T ss_dssp SSCHHHHHHHHHHC-------SSCEEECTTCCTTHHHHHHHHTTCCSEECCCT
T ss_pred hhhHHHHHHHHhhC-------CCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 11245556677765 79999999999999999999876 78998753
No 184
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=97.74 E-value=0.00058 Score=68.06 Aligned_cols=150 Identities=13% Similarity=0.024 Sum_probs=100.8
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..++. ..+++++.+.++++.+.|++.+++++++| +++...+++++||+.+ ++|+.++.+.
T Consensus 135 v~~~~~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (378)
T 2qdd_A 135 VPINSSIS-TGTPDQMLGLIAEAAAQGYRTHSAKIGGS--------------DPAQDIARIEAISAGLPDGHRVTFDVNR 199 (378)
T ss_dssp EEBEEEEC-SCCHHHHHHHHHHHHHHTCCEEEEECCSS--------------CHHHHHHHHHHHHHSCCTTCEEEEECTT
T ss_pred CceEEEec-CCCHHHHHHHHHHHHHHhhhheeecCCCC--------------ChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46666664 35788888888888888999999998765 2345667888888876 7899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+. .|+ .| | +|. + .++..+++++.+
T Consensus 200 ~~~~~~a~~~~~~l~-~~i-~i--------------E--qP~------------------~-d~~~~~~l~~~~------ 236 (378)
T 2qdd_A 200 AWTPAIAVEVLNSVR-ARD-WI--------------E--QPC------------------Q-TLDQCAHVARRV------ 236 (378)
T ss_dssp CCCHHHHHHHHTSCC-CCC-EE--------------E--CCS------------------S-SHHHHHHHHTTC------
T ss_pred CCCHHHHHHHHHHhC-CCc-EE--------------E--cCC------------------C-CHHHHHHHHHhC------
Confidence 554 1233343343 343 22 1 121 1 234455566554
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++||++.+.+.+.+++.+++..| +|.|++-.... .|+.-..++.+ +.+++|+
T Consensus 237 -~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~~----~A~~~g~ 289 (378)
T 2qdd_A 237 -ANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRV-GGLTRARQIRD----FGVSVGW 289 (378)
T ss_dssp -CSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHHH----HHHHHTC
T ss_pred -CCCEEECCCcCCHHHHHHHHHhCCCCEEEeccccc-CCHHHHHHHHH----HHHHcCC
Confidence 79999999999999999999866 89999976554 33554444433 3445555
No 185
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.72 E-value=0.00018 Score=72.15 Aligned_cols=101 Identities=19% Similarity=0.226 Sum_probs=73.8
Q ss_pred ChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 202 DCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 202 ~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
+++.+.++++.+++. ..|+++++.+. +..+.++.+.++|+|.+++..+... ..+.+
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~--~~~e~a~~~~~agad~i~i~~~~~~---------------------~~~~~ 195 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ--NVREIAPIVIKAGADLLVIQGTLIS---------------------AEHVN 195 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT--THHHHHHHHHHTTCSEEEEECSSCC---------------------SSCCC
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc--cHHHHHHHHHHCCCCEEEEeCCccc---------------------cccCC
Confidence 678888888888876 89999999874 5677888888999999976632100 00111
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
+. ..+..|.++++.. ++||++ |||.+++|+.+++.+|||+|.+++
T Consensus 196 ~~---~~~~~i~~l~~~~-------~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 196 TG---GEALNLKEFIGSL-------DVPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp C--------CHHHHHHHC-------SSCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred Cc---ccHHHHHHHHHhc-------CCCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 10 0223355666665 799998 899999999999999999999976
No 186
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=97.70 E-value=0.00072 Score=67.72 Aligned_cols=145 Identities=7% Similarity=-0.014 Sum_probs=102.5
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEP 235 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~ 235 (422)
.+++++.+.++++.+.|++.|+|+++.. .++...+++++||+.+ ++||.++....++ +..++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~ 213 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD--------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSF 213 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS--------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC--------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHH
Confidence 5789999999888889999999986410 1355667888888865 7899999876654 35677
Q ss_pred HHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecC
Q 014581 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GG 315 (422)
++.+.+.|++.|. +|.+ +..++..+++++.+ ++||++.+.
T Consensus 214 ~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~-------~iPIa~dE~ 253 (391)
T 2qgy_A 214 LKEVSSFNPYWIE----------------EPVD-----------------GENISLLTEIKNTF-------NMKVVTGEK 253 (391)
T ss_dssp HHHHGGGCCSEEE----------------CSSC-----------------TTCHHHHHHHHHHC-------SSCEEECTT
T ss_pred HHHHHhcCCCeEe----------------CCCC-----------------hhhHHHHHHHHhhC-------CCCEEEcCC
Confidence 8888888888662 1211 11234556677765 799999999
Q ss_pred CCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 316 VETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 316 I~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
+.+.+++.+++..| +|.|++--.-. .|+.-..++. ++.+++|+
T Consensus 254 ~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~gi 297 (391)
T 2qgy_A 254 QSGLVHFRELISRNAADIFNPDISGM-GGLIDIIEIS----NEASNNGI 297 (391)
T ss_dssp CCSHHHHHHHHHTTCCSEECCBTTTS-SCHHHHHHHH----HHHHHTTC
T ss_pred cCCHHHHHHHHHcCCCCEEEECcchh-CCHHHHHHHH----HHHHHCCC
Confidence 99999999999876 89999864432 2344344433 34445555
No 187
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=97.70 E-value=0.00045 Score=68.98 Aligned_cols=151 Identities=17% Similarity=0.081 Sum_probs=106.0
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+.+++. ..+++++.+.++.+.+.|++.+-++++| +++.-.+.+++||+.+ +++|.++.+.
T Consensus 135 v~~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiK~G~---------------~~~~d~~~v~avR~a~g~~~~l~vDan~ 198 (378)
T 3eez_A 135 RPIASSVG-AKSVEETRAVIDRYRQRGYVAHSVKIGG---------------DVERDIARIRDVEDIREPGEIVLYDVNR 198 (378)
T ss_dssp EEBBCCBC-SCCHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHTTSCCTTCEEEEECTT
T ss_pred EEEEEEec-CCCHHHHHHHHHHHHhCCCCEEEeccCC---------------CHHHHHHHHHHHHHHcCCCceEEEECCC
Confidence 46666775 5688888888888888899999999865 2344567788999886 7899999877
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|+ .|. +|.+ .++..+++++..
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE----------------qP~~-------------------~~~~~~~l~~~~------ 236 (378)
T 3eez_A 199 GWTRQQALRVMRATEDLHV-MFE----------------QPGE-------------------TLDDIAAIRPLH------ 236 (378)
T ss_dssp CCCHHHHHHHHHHTGGGTC-CEE----------------CCSS-------------------SHHHHHHTGGGC------
T ss_pred CCCHHHHHHHHHHhccCCe-EEe----------------cCCC-------------------CHHHHHHHHhhC------
Confidence 664 23456666766665 441 1211 123344455543
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.||+-..-.- |+.-..++. .+.+++|+.
T Consensus 237 -~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~G-Git~~~~ia----~~A~~~g~~ 290 (378)
T 3eez_A 237 -SAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVG-GLTRAARMR----DIALTHGID 290 (378)
T ss_dssp -CCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHT-SHHHHHHHH----HHHHHTTCE
T ss_pred -CCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcC-CHHHHHHHH----HHHHHcCCE
Confidence 79999999999999999999876 799999876653 455554443 345566653
No 188
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.69 E-value=0.0016 Score=60.32 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=86.0
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~ 230 (422)
|+++=+. +.+.+++.+.++.+.+.|++.||+-+..|. ..+.++.+++... .+.+.... +.
T Consensus 18 ~ii~vir-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~-~l~vgaGt-vl 77 (224)
T 1vhc_A 18 KIVPVIA-LDNADDILPLADTLAKNGLSVAEITFRSEA-----------------AADAIRLLRANRP-DFLIAAGT-VL 77 (224)
T ss_dssp CEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEETTSTT-----------------HHHHHHHHHHHCT-TCEEEEES-CC
T ss_pred CeEEEEe-CCCHHHHHHHHHHHHHcCCCEEEEeccCch-----------------HHHHHHHHHHhCc-CcEEeeCc-Ee
Confidence 5666665 467788899999999999999999853222 1234444444432 23333222 22
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
..+-++.+.++|+|+|+.-++ | ...+...++ + ++++
T Consensus 78 -~~d~~~~A~~aGAd~v~~p~~-------d----------------------------~~v~~~ar~-~-------g~~~ 113 (224)
T 1vhc_A 78 -TAEQVVLAKSSGADFVVTPGL-------N----------------------------PKIVKLCQD-L-------NFPI 113 (224)
T ss_dssp -SHHHHHHHHHHTCSEEECSSC-------C----------------------------HHHHHHHHH-T-------TCCE
T ss_pred -eHHHHHHHHHCCCCEEEECCC-------C----------------------------HHHHHHHHH-h-------CCCE
Confidence 246788999999999942211 1 122333444 3 4555
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+. |+.|++++.+++.+|||.|.+..+-...|+..++.+..
T Consensus 114 i~--Gv~t~~e~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~ 153 (224)
T 1vhc_A 114 TP--GVNNPMAIEIALEMGISAVKFFPAEASGGVKMIKALLG 153 (224)
T ss_dssp EC--EECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHT
T ss_pred Ee--ccCCHHHHHHHHHCCCCEEEEeeCccccCHHHHHHHHh
Confidence 54 49999999999999999999955322235666666544
No 189
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=97.68 E-value=0.00067 Score=67.33 Aligned_cols=153 Identities=10% Similarity=0.083 Sum_probs=104.8
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+..++. ..+++++.+.++++.+.|++.+.++++. +++...+++++||+.+ ++||.++.+..
T Consensus 132 ~~~~~i~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~ 195 (369)
T 2p8b_A 132 PVTHVLS-IADPENMAEEAASMIQKGYQSFKMKVGT---------------NVKEDVKRIEAVRERVGNDIAIRVDVNQG 195 (369)
T ss_dssp ECCEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred eeeEEec-CCChHHHHHHHHHHHHcCcCEEEEEeCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4445554 3478888888888888899999998752 3455667888888876 78999997765
Q ss_pred CC--ChH-HHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 229 IT--DIT-EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 229 ~~--~~~-~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
++ +.. ++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 196 ~~~~~a~~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------ 236 (369)
T 2p8b_A 196 WKNSANTLTALRSLGHLNIDWIE----------------QPVI-----------------ADDIDAMAHIRSKT------ 236 (369)
T ss_dssp TBSHHHHHHHHHTSTTSCCSCEE----------------CCBC-----------------TTCHHHHHHHHHTC------
T ss_pred CCHHHHHHHHHHHHHhCCCcEEE----------------CCCC-----------------cccHHHHHHHHHhC------
Confidence 54 234 566666666766441 1211 11234555676654
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++--.-. .|..-..++. ++.+++|+.
T Consensus 237 -~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~~ 290 (369)
T 2p8b_A 237 -DLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKC-GGIYPAVKLA----HQAEMAGIE 290 (369)
T ss_dssp -CSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHH----HHHHHTTCE
T ss_pred -CCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchh-CCHHHHHHHH----HHHHHcCCc
Confidence 79999999999999999999876 89999976554 3454444433 345566664
No 190
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.67 E-value=0.0036 Score=60.52 Aligned_cols=222 Identities=12% Similarity=0.088 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+.+-+.- ....|+++.+.+ +.++++..++.+.+..+
T Consensus 33 ~D~~sA~l~e~aGf~ai~vsG~~~a-----------------------~s~~G~pD~~~v---t~~em~~~~~~i~r~~~ 86 (307)
T 3lye_A 33 YDGLSARTAMELGFKSLYMTGAGTT-----------------------ASRLGQPDLAIA---QLHDMRDNADMIANLDP 86 (307)
T ss_dssp CSHHHHHHHHHTTCSCEEECHHHHH-----------------------HHHHCCCSSSCS---CHHHHHHHHHHHHTSST
T ss_pred cCHHHHHHHHHcCCCEEEeccHHHH-----------------------HHhcCCCCCCCC---CHHHHHHHHHhhhccCC
Confidence 3566677777889887765322110 012355554433 37888888888776543
Q ss_pred -CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCccccccccccChhHHHHHHHHHhhc---cCcc--
Q 014581 149 -DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERKMGAAVGQDCRLLEEVCGWINAK---ATVP-- 220 (422)
Q Consensus 149 -~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~---~~iP-- 220 (422)
+.||++-+-.++ +++...+.+++++++|+.++.|.=.. |..-.+. .|..+....+.+.+|.. .+++ .+.+
T Consensus 87 ~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~-~gk~l~~~~e~~~rI~A-a~~A~~~~~~d~~ 164 (307)
T 3lye_A 87 FGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHL-SGKKVVSRDEYLVRIRA-AVATKRRLRSDFV 164 (307)
T ss_dssp TSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC---------CBCCHHHHHHHHHH-HHHHHHHTTCCCE
T ss_pred CCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCC-CCCeecCHHHHHHHHHH-HHHHHHhcCCCeE
Confidence 589999886554 56777888999999999999886321 2110000 12222222233333332 2222 1334
Q ss_pred EEEEECCC----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 221 VWAKMTPN----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 221 v~vKl~~~----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
|+.+.-.. +++..+-+++..++|||.|.+.+.. +.+.++++.
T Consensus 165 I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~----------------------------------~~~~~~~i~ 210 (307)
T 3lye_A 165 LIARTDALQSLGYEECIERLRAARDEGADVGLLEGFR----------------------------------SKEQAAAAV 210 (307)
T ss_dssp EEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS----------------------------------CHHHHHHHH
T ss_pred EEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCCC----------------------------------CHHHHHHHH
Confidence 44443221 1134455666789999999765311 124566777
Q ss_pred HHhhccCCCCCceEEEe---cCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHc
Q 014581 297 KMMKSEFNDKDYSLSGI---GGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMH 361 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~---GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~ 361 (422)
+.++ ++|+.++ ||-...-.+.++-.+|...|..+..++.-- +.-+.+.++.+++.-
T Consensus 211 ~~~~------~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~raa---~~a~~~~~~~l~~~g 269 (307)
T 3lye_A 211 AALA------PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAPA---YAAIRETLVRLRDHG 269 (307)
T ss_dssp HHHT------TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHHH---HHHHHHHHHHHHHHS
T ss_pred HHcc------CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHHH---HHHHHHHHHHHHHhC
Confidence 7763 3666543 442222235566678999998888777542 334444444444443
No 191
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.67 E-value=0.0041 Score=59.93 Aligned_cols=213 Identities=13% Similarity=0.151 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+.+-+.- ....|++..+.++ .++++...+.+.+..+
T Consensus 26 ~D~~sA~l~e~aGf~ai~vsG~~~a-----------------------~~~~G~pD~~~vt---~~em~~~~~~I~~~~~ 79 (302)
T 3fa4_A 26 YDGLSARVALSAGFDALYMTGAGTA-----------------------ASVHGQADLGICT---LNDMRANAEMISNISP 79 (302)
T ss_dssp CSHHHHHHHHTTTCSCEEECHHHHH-----------------------HHHHSCCSSSCCC---HHHHHHHHHHHHTTST
T ss_pred cCHHHHHHHHHcCCCEEEeCcHHHH-----------------------HHHcCCCCCCcCC---HHHHHHHHHHHHhhcc
Confidence 3566667777788887765322110 0123555544333 7888888887776545
Q ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccC-----CCCCCCccccccccccChhHHHHHHHHHhhc----cC
Q 014581 149 DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFS-----CPHGMPERKMGAAVGQDCRLLEEVCGWINAK----AT 218 (422)
Q Consensus 149 ~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~s-----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~----~~ 218 (422)
+.||++-+-.++ +++...+.+++++++|+.++.|.=. |.|.. |..+....+.+.+|..++... .+
T Consensus 80 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~-----gk~l~~~~e~~~rI~Aa~~A~~~~~~d 154 (302)
T 3fa4_A 80 STPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLA-----GKILVDTDTYVTRIRAAVQARQRIGSD 154 (302)
T ss_dssp TSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC------------CCCBCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCC-----CCeecCHHHHHHHHHHHHHHHHhcCCC
Confidence 889999886554 5677788899999999999988632 22211 222222223333333332211 23
Q ss_pred ccEEEEECCC----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 219 VPVWAKMTPN----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 219 iPv~vKl~~~----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
.-|+.+.-.. +++..+-+++..++|||+|.+.+.. +.+.+++
T Consensus 155 ~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~----------------------------------~~~ei~~ 200 (302)
T 3fa4_A 155 IVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGIT----------------------------------SREMARQ 200 (302)
T ss_dssp CEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTCC----------------------------------CHHHHHH
T ss_pred EEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCCC----------------------------------CHHHHHH
Confidence 4455554321 1223455667789999999654310 1245667
Q ss_pred HHHHhhccCCCCCceEEEe---cCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 295 IAKMMKSEFNDKDYSLSGI---GGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~---GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+.+.++ +.|+.++ +|-...-++.++-.+|...|..+..++.--...+++..+
T Consensus 201 ~~~~~~------~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~raa~~A~~~~~~ 255 (302)
T 3fa4_A 201 VIQDLA------GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGPAVAAMREAME 255 (302)
T ss_dssp HHHHTT------TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHHHHHHHHHHHH
T ss_pred HHHHhc------CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHH
Confidence 777763 4677653 332222245566678999999998887653333333333
No 192
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=97.65 E-value=0.00035 Score=70.07 Aligned_cols=156 Identities=10% Similarity=0.010 Sum_probs=106.3
Q ss_pred CeEEEEeCC--CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEE
Q 014581 150 KILIASIME--EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~~--~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
.|+..+++. +.+++++.+.++++.++|++.|+++++- .+.+...+++++||+.+ +++|.+..
T Consensus 149 vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~~~e~v~avR~avg~d~~l~vDa 214 (393)
T 2og9_A 149 VRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQ--------------PDGALDIARVTAVRKHLGDAVPLMVDA 214 (393)
T ss_dssp EEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCC--------------SCHHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred eEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCC--------------CCHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 355544321 2378999999998888999999998642 13455677888888875 78999997
Q ss_pred CCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 226 TPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 226 ~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
...++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 215 n~~~~~~~a~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~~---- 257 (393)
T 2og9_A 215 NQQWDRPTAQRMCRIFEPFNLVWIE----------------EPLD-----------------AYDHEGHAALALQF---- 257 (393)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEE----------------CCSC-----------------TTCHHHHHHHHHHC----
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----------------CCCC-----------------cccHHHHHHHHHhC----
Confidence 76554 345777888888887652 1211 11234556677765
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|+|++--.-. .|..-..++ .++.+++|+.
T Consensus 258 ---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~gi~ 311 (393)
T 2og9_A 258 ---DTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRV-GGITPFLKI----ASLAEHAGLM 311 (393)
T ss_dssp ---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred ---CCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999987 89998864332 233323332 3455666664
No 193
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.65 E-value=0.0004 Score=63.53 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
..++.++++++.+. .++||++.|||. ++++.+++.+||++|.++|+++..
T Consensus 129 ~g~~~l~~~~~~~~-----~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~ 178 (210)
T 3ceu_A 129 YTAEELREAQKAKI-----IDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNK 178 (210)
T ss_dssp CCHHHHHHHHHTTC-----SSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTT
T ss_pred CCHHHHHHHHHhcC-----CCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcC
Confidence 34566666666420 179999999998 999999999999999999999863
No 194
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=97.64 E-value=0.0014 Score=64.98 Aligned_cols=151 Identities=11% Similarity=0.019 Sum_probs=104.2
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..++. ..+++++.+.++++.+.|++.++++++. +++...+++++||+.+ +++|.++.+.
T Consensus 136 vp~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (371)
T 2ps2_A 136 LPLISSIY-VGEPEDMRARVAKYRAKGYKGQSVKISG---------------EPVTDAKRITAALANQQPDEFFIVDANG 199 (371)
T ss_dssp EEBEEEEC-SCCHHHHHHHHHHHHTTTCCEEEEECCS---------------CHHHHHHHHHHHTTTCCTTCEEEEECTT
T ss_pred eEEEEEeC-CCCHHHHHHHHHHHHHhChheEEeecCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 47777775 4578899888888888899999998752 2455678889999876 7899999876
Q ss_pred CCC--ChHHHHHHH-HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 228 NIT--DITEPARVA-LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 228 ~~~--~~~~~a~~l-~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
.++ +..++++.+ .+.|+ .|. +|. + .++..+++++.+
T Consensus 200 ~~~~~~a~~~~~~l~~~~~i-~iE----------------~P~------------------~-~~~~~~~l~~~~----- 238 (371)
T 2ps2_A 200 KLSVETALRLLRLLPHGLDF-ALE----------------APC------------------A-TWRECISLRRKT----- 238 (371)
T ss_dssp BCCHHHHHHHHHHSCTTCCC-EEE----------------CCB------------------S-SHHHHHHHHTTC-----
T ss_pred CcCHHHHHHHHHHHHhhcCC-cCc----------------CCc------------------C-CHHHHHHHHhhC-----
Confidence 554 244566666 66666 441 121 1 134445566554
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++--.-. .|..-..++. ++.+++|+.
T Consensus 239 --~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~~ 292 (371)
T 2ps2_A 239 --DIPIIYDELATNEMSIVKILADDAAEGIDLKISKA-GGLTRGRRQR----DICLAAGYS 292 (371)
T ss_dssp --CSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHH-TSHHHHHHHH----HHHHHHTCE
T ss_pred --CCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhc-CCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999876 79999865443 2344333333 344555553
No 195
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=97.64 E-value=0.0035 Score=62.65 Aligned_cols=152 Identities=10% Similarity=-0.026 Sum_probs=103.8
Q ss_pred CeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++.. ..+++++.+.++++.+.|++.+.++++++ +++...+++++||+.+ +++|.+...
T Consensus 133 vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~~~e~v~avR~a~G~~~~l~vDan 198 (389)
T 2oz8_A 133 VKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHR--------------DFDRDLRRLELLKTCVPAGSKVMIDPN 198 (389)
T ss_dssp EEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCS--------------SHHHHHHHHHHHHTTSCTTCEEEEECT
T ss_pred eEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCC--------------CHHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 466666532 13788898888888888999999997642 2345567888999876 689999887
Q ss_pred CCCC--ChHHHHHHHHH--cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 227 PNIT--DITEPARVALR--SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~--aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
..++ +..++++.+.+ .+++.|. +|.+ +..++..+++++.+.
T Consensus 199 ~~~~~~~a~~~~~~l~~~g~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~~-- 243 (389)
T 2oz8_A 199 EAWTSKEALTKLVAIREAGHDLLWVE----------------DPIL-----------------RHDHDGLRTLRHAVT-- 243 (389)
T ss_dssp TCBCHHHHHHHHHHHHHTTCCCSEEE----------------SCBC-----------------TTCHHHHHHHHHHCC--
T ss_pred CCCCHHHHHHHHHHHHhcCCCceEEe----------------CCCC-----------------CcCHHHHHHHHhhCC--
Confidence 6554 34677888888 5554431 1211 112344556666541
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+ +.+|+.+++..| +|+|++. .|..-..++ .++.+++|+.
T Consensus 244 ----~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik-----GGit~a~~i----~~~A~~~gi~ 292 (389)
T 2oz8_A 244 ----WTQINSGEYL-DLQGKRLLLEAHAADILNVH-----GQVTDVMRI----GWLAAELGIP 292 (389)
T ss_dssp ----SSEEEECTTC-CHHHHHHHHHTTCCSEEEEC-----SCHHHHHHH----HHHHHHHTCC
T ss_pred ----CCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC-----cCHHHHHHH----HHHHHHcCCe
Confidence 5999999999 999999999987 8999998 444433333 3344555653
No 196
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.63 E-value=0.0015 Score=60.04 Aligned_cols=138 Identities=8% Similarity=0.038 Sum_probs=87.9
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
+.|+++-+. ..+.+++.+.++.+.+.|++.||+-+..|. ..+.++.+++... .+.+.-..
T Consensus 15 ~~~~i~v~r-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~-~~~vgagt- 74 (214)
T 1wbh_A 15 TGPVVPVIV-VKKLEHAVPMAKALVAGGVRVLNVTLRTEC-----------------AVDAIRAIAKEVP-EAIVGAGT- 74 (214)
T ss_dssp SCSEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEESCSTT-----------------HHHHHHHHHHHCT-TSEEEEES-
T ss_pred HCCEEEEEE-CCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----------------HHHHHHHHHHHCc-CCEEeeCE-
Confidence 457887775 567888899999999999999999864332 1234444444432 12222222
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCc
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDY 308 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~i 308 (422)
+-+ .+-++.+.++|+|+++.-++ | .. +.+.++.+ ++
T Consensus 75 vi~-~d~~~~A~~aGAd~v~~p~~-------d----------------------------~~-v~~~~~~~-------g~ 110 (214)
T 1wbh_A 75 VLN-PQQLAEVTEAGAQFAISPGL-------T----------------------------EP-LLKAATEG-------TI 110 (214)
T ss_dssp CCS-HHHHHHHHHHTCSCEEESSC-------C----------------------------HH-HHHHHHHS-------SS
T ss_pred EEE-HHHHHHHHHcCCCEEEcCCC-------C----------------------------HH-HHHHHHHh-------CC
Confidence 322 36788899999999963321 1 11 22233433 56
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 309 SLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 309 pIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+++. |+.|++++.+++.+|||.|.+..+-...|+..++.+..
T Consensus 111 ~~i~--G~~t~~e~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~ 152 (214)
T 1wbh_A 111 PLIP--GISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAG 152 (214)
T ss_dssp CEEE--EESSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHT
T ss_pred CEEE--ecCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHhh
Confidence 6665 49999999999999999999954322235666665543
No 197
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=97.62 E-value=0.0012 Score=67.04 Aligned_cols=156 Identities=16% Similarity=0.132 Sum_probs=108.0
Q ss_pred CeEEEEe---CCC-------CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc-ccccChhHHHHHHHHHhhcc-
Q 014581 150 KILIASI---MEE-------YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA-AVGQDCRLLEEVCGWINAKA- 217 (422)
Q Consensus 150 ~pvi~si---~~~-------~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~-~l~~~~~~v~~iv~~vr~~~- 217 (422)
.|+..++ . + .+++++.+.++.+.+.|+..+-+++++|.... .|. ....+.+...+++++||+.+
T Consensus 126 v~~y~~~~~~~-g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~---~G~~~~~~~~~~d~e~v~avR~avG 201 (433)
T 3rcy_A 126 IRAYTYLYPLP-HHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLR---GGHMPAMTDISLSVEFCRKIRAAVG 201 (433)
T ss_dssp EEEEEECCCCT-TSCHHHHTTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT---CCBCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccC-CcccccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc---cCCCcchhhHHHHHHHHHHHHHHhC
Confidence 4677766 2 2 47888888888888889999999999885311 111 11123455667888888875
Q ss_pred -CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 218 -TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 218 -~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
+++|.+..+..++ +..++++.+.+.|++.|. +|.+ |..++..++
T Consensus 202 ~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iE----------------eP~~-----------------~~~~~~~~~ 248 (433)
T 3rcy_A 202 DKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYE----------------EPVP-----------------PDNVGAMAQ 248 (433)
T ss_dssp TSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHH
T ss_pred CCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEE----------------CCCC-----------------hhhHHHHHH
Confidence 7899998776554 345678888888887762 1221 112355567
Q ss_pred HHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHH
Q 014581 295 IAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i 350 (422)
+++.. ++||++.+.+.+..|+.+++..| +|.||+--.-. .|..-..+|
T Consensus 249 l~~~~-------~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~-GGit~~~ki 297 (433)
T 3rcy_A 249 VARAV-------RIPVATGERLTTKAEFAPVLREGAAAILQPALGRA-GGIWEMKKV 297 (433)
T ss_dssp HHHHS-------SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH-THHHHHHHH
T ss_pred HHhcc-------CCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhc-CCHHHHHHH
Confidence 77765 79999999999999999999986 88999875443 234434443
No 198
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=97.60 E-value=0.00064 Score=68.54 Aligned_cols=132 Identities=16% Similarity=0.125 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEcc----CCCCCCCccccccccc--cChhHHHHHHHHHhhcc--CccEEEEECCCCC--
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNF----SCPHGMPERKMGAAVG--QDCRLLEEVCGWINAKA--TVPVWAKMTPNIT-- 230 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~----scP~~~~~~~~G~~l~--~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~-- 230 (422)
+++++.+.++++.+.|++.+++++ +.... + +|+.+. .+.+...+++++||+.+ +++|.+.....++
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~-~---~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~ 224 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR-D---FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIP 224 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS-C---SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC-C---cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH
Confidence 678888888888888999999998 33211 1 334443 25566778888898875 6899998876554
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..++++.+.+.|++.|. +|.+ +..++..+++++.+ ++||
T Consensus 225 ~a~~~~~~l~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~-------~iPI 264 (410)
T 2qq6_A 225 SSIRFARAMEPFGLLWLE----------------EPTP-----------------PENLDALAEVRRST-------STPI 264 (410)
T ss_dssp HHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHTTC-------SSCE
T ss_pred HHHHHHHHHhhcCCCeEE----------------CCCC-----------------hhhHHHHHHHHhhC-------CCCE
Confidence 345677778888887652 1211 11234445566554 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEh
Q 014581 311 SGIGGVETGGDAAEFILLG-ANTVQVC 336 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aG-Ad~V~vg 336 (422)
++.+.+.+.+++.+++..| +|.|++=
T Consensus 265 a~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 265 CAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999876 7898875
No 199
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.59 E-value=0.0011 Score=63.30 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=71.7
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCccccccccc---cChhHHHHHHHHHhhccCccEEEEECC---CCCC---hHHHHHHH
Q 014581 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVG---QDCRLLEEVCGWINAKATVPVWAKMTP---NITD---ITEPARVA 239 (422)
Q Consensus 169 a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~---~~~~~v~~iv~~vr~~~~iPv~vKl~~---~~~~---~~~~a~~l 239 (422)
++.+.+.|||-|++=+. +|.-.. .+.+.+.+-++++++.+. +..+|+-- .+++ +...++.+
T Consensus 106 a~~Av~~GAdEIDmVin---------ig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia 175 (297)
T 4eiv_A 106 AVGALKDGADEIECLID---------WRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAA 175 (297)
T ss_dssp HHHHHHTTCSEEEEECC---------THHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeeee---------HHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHH
Confidence 44555669999886431 122223 355677777778887763 55677643 3443 34566778
Q ss_pred HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC---------------C
Q 014581 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF---------------N 304 (422)
Q Consensus 240 ~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~---------------~ 304 (422)
.++|+|+|.-+..+. .+|- +++.|+.+++.+.+.+ .
T Consensus 176 ~~AGADFVKTSTGf~---------------------~~gA--------T~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~ 226 (297)
T 4eiv_A 176 LEGGADFLQTSSGLG---------------------ATHA--------TMFTVHLISIALREYMVRENERIRVEGINREG 226 (297)
T ss_dssp HHHTCSEEECCCSSS---------------------SCCC--------CHHHHHHHHHHHHHHHCC--------------
T ss_pred HHhCCCEEEcCCCCC---------------------CCCC--------CHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 899999996432221 1111 1233333444331000 0
Q ss_pred --CCCceEEEe-cCCCCHHHHHHHHH
Q 014581 305 --DKDYSLSGI-GGVETGGDAAEFIL 327 (422)
Q Consensus 305 --~~~ipIIa~-GGI~s~~da~~~l~ 327 (422)
+.++-|=++ |||++.+|+.+++.
T Consensus 227 ~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 227 AAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp ----CCEEEEECTTCCHHHHHHHHHH
T ss_pred ccCCceeEEecCCCCCCHHHHHHHHH
Confidence 027889999 99999999999998
No 200
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=97.58 E-value=0.003 Score=62.47 Aligned_cols=154 Identities=11% Similarity=0.040 Sum_probs=105.2
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+..++. ..+++++.+.++++.+.|++.+.++++++ +++...+.+++||+.+ ++++.++.+..
T Consensus 131 ~~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~d~~~v~avr~a~g~~~~l~vDan~~ 195 (366)
T 1tkk_A 131 ETDYTVS-VNSPEEMAADAENYLKQGFQTLKIKVGKD--------------DIATDIARIQEIRKRVGSAVKLRLDANQG 195 (366)
T ss_dssp EBCEEEC-SCCHHHHHHHHHHHHHHTCCEEEEECCSS--------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeeEEec-CCCHHHHHHHHHHHHHcCCCeEEEEeCCC--------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4445554 34788888888888888999999998652 2344567777888765 78999998765
Q ss_pred CC--ChHHHHHHHHH--cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 229 IT--DITEPARVALR--SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 229 ~~--~~~~~a~~l~~--aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
++ +..++++.+.+ .|++.|. +|.+ +..++..+++++.+
T Consensus 196 ~~~~~a~~~~~~l~~~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~----- 237 (366)
T 1tkk_A 196 WRPKEAVTAIRKMEDAGLGIELVE----------------QPVH-----------------KDDLAGLKKVTDAT----- 237 (366)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHhhcCCCceEEE----------------CCCC-----------------cccHHHHHHHHhhC-----
Confidence 54 34577888888 6665441 1211 11234556677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++. ++.+++|+.
T Consensus 238 --~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~~ 291 (366)
T 1tkk_A 238 --DTPIMADESVFTPRQAFEVLQTRSADLINIKLMKA-GGISGAEKIN----AMAEACGVE 291 (366)
T ss_dssp --SSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHH----HHHHHHTCC
T ss_pred --CCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhh-cCHHHHHHHH----HHHHHcCCc
Confidence 79999999999999999999865 89999865443 2344333333 345566664
No 201
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.58 E-value=0.00061 Score=66.56 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=99.3
Q ss_pred HHHHHHhCCCEEEEccCC-CCCCCccccccccc-cChhHHHHHHHHHhhccCccEEEEEC--C-CC---CC---------
Q 014581 169 IDRVEETGIDAIEVNFSC-PHGMPERKMGAAVG-QDCRLLEEVCGWINAKATVPVWAKMT--P-NI---TD--------- 231 (422)
Q Consensus 169 a~~~~~aGaD~iElN~sc-P~~~~~~~~G~~l~-~~~~~v~~iv~~vr~~~~iPv~vKl~--~-~~---~~--------- 231 (422)
++.+.+.|||++-+.+.. |..... +. +..+.+.++.++.++. ++|+++=+- | .. .+
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e------~~~~q~~~l~rv~~ec~~~-GiPlllEil~y~~~~~~~~~~~~a~~~p~ 188 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQ------VNVQKQAYIERIGSECQAE-DIPFFLEILTYDETISNNSSVEFAKVKVH 188 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHH------HHHHHHHHHHHHHHHHHHH-TCCEEEEEEECBTTBSCTTSHHHHTTHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHH------HHHHHHHHHHHHHHHHHHc-CCceEEEEeccCCCCCCCcchhhhccCHH
Confidence 345667799999887642 221100 00 1223445555444333 899988552 2 11 11
Q ss_pred -hHHHHHHH--HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc--hhHHHHHHHHHHHhhccCCCC
Q 014581 232 -ITEPARVA--LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH--PIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 232 -~~~~a~~l--~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~--p~al~~v~~i~~~~~~~~~~~ 306 (422)
+...++.+ .+.|+|-+.+--+.. +.+ .+. +. .|..++ ..+.+..+++.+.+
T Consensus 189 ~V~~a~R~~~~~elGaDv~Kve~p~~--~~~-v~g---------~~-----~~~~~y~~~ea~~~f~~~~~a~------- 244 (332)
T 3iv3_A 189 KVNDAMKVFSAERFGIDVLKVEVPVN--MVY-VEG---------FA-----EGEVVYSKEEAAQAFREQEAST------- 244 (332)
T ss_dssp HHHHHHHHHTSGGGCCSEEEECCSSC--GGG-BTT---------TC-----SSCCCBCHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHhhcCcCCcEEEEecCCC--hhh-hcc---------cc-----cccccccHHHHHHHHHHHHhcC-------
Confidence 34445556 466999887653321 100 011 10 111111 12223344444433
Q ss_pred CceEE-EecCCCCHHHHHHHH----HhCC--CEEEEhhHHHhhhhHHHHH-HHHHHHHHHHHcCCCCHHHhhcC
Q 014581 307 DYSLS-GIGGVETGGDAAEFI----LLGA--NTVQVCTGVMMHGYGLVKR-LCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 307 ~ipII-a~GGI~s~~da~~~l----~aGA--d~V~vgtall~~Gp~~i~~-i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
++|+| .+||+ +.++.++.+ .+|| .+|.+||.++.++...+.+ =.+..++||+..|..+|+++--.
T Consensus 245 ~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v 317 (332)
T 3iv3_A 245 DLPYIYLSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQNINELNKV 317 (332)
T ss_dssp SSCEEEECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTTHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCEEEECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHhhhhhhccccHHHHHHHHHHHhHHHHHHHHHH
Confidence 79955 79998 567766655 5899 9999999999987665433 25678899999999999887543
No 202
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.57 E-value=0.00077 Score=64.93 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=86.8
Q ss_pred CCCeEEEEeCCCCC----H--HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccE
Q 014581 148 PDKILIASIMEEYN----K--AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221 (422)
Q Consensus 148 ~~~pvi~si~~~~~----~--~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv 221 (422)
.+.|+|+.+..+.+ + +....-++.+.+.|||+|.+.+.--. ... ....+.+.+++++.++. .+|+
T Consensus 104 ~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs----~~~----~~~l~~i~~v~~~a~~~-Glpv 174 (295)
T 3glc_A 104 TNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGS----EYE----HQSIKNIIQLVDAGMKV-GMPT 174 (295)
T ss_dssp GCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTS----TTH----HHHHHHHHHHHHHHHTT-TCCE
T ss_pred CCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCC----CcH----HHHHHHHHHHHHHHHHc-CCEE
Confidence 36789987742210 1 11111245555779999888653110 000 01223344444444333 6898
Q ss_pred EEEECCC----CCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 222 WAKMTPN----ITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 222 ~vKl~~~----~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
++= ++. ..+ +...++.+.+.|+|.|...-+ + +.+++
T Consensus 175 Iie-~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t------------------------~------------e~~~~ 217 (295)
T 3glc_A 175 MAV-TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV------------------------E------------KGFER 217 (295)
T ss_dssp EEE-ECC----CCSHHHHHHHHHHHHHTTCSEEEEECC------------------------T------------TTHHH
T ss_pred EEE-CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC------------------------H------------HHHHH
Confidence 873 221 123 244678889999998865411 0 01234
Q ss_pred HHHHhhccCCCCCceEEEecCCCC-HHH----HHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 295 IAKMMKSEFNDKDYSLSGIGGVET-GGD----AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~GGI~s-~~d----a~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
+.+.+ .+||++.||+.. .+| +.+++.+||++|.+||.++.. ++ ...+.+.|.
T Consensus 218 vv~~~-------~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~-~d-p~~~~~al~ 274 (295)
T 3glc_A 218 IVAGC-------PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS-DH-PVAMMKAVQ 274 (295)
T ss_dssp HHHTC-------SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS-SS-HHHHHHHHH
T ss_pred HHHhC-------CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC-cC-HHHHHHHHH
Confidence 55444 799999999984 444 445568999999999999975 32 234444443
No 203
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.57 E-value=0.0043 Score=62.20 Aligned_cols=142 Identities=14% Similarity=0.026 Sum_probs=104.4
Q ss_pred CeEEEEeCC--CCCHHHHHHHH-HHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEE
Q 014581 150 KILIASIME--EYNKAAWEELI-DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAK 224 (422)
Q Consensus 150 ~pvi~si~~--~~~~~~~~~~a-~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vK 224 (422)
.|+.+++.+ ..+++++.+.+ +.+.+.|+..+-+.++++... ...+++.-.+.+++||+.+ +++|.|.
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~--------~~~~~~~d~~~v~avR~a~g~~~~l~vD 197 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR--------CDVDIPGDIAKARAVRELLGPDAVIGFD 197 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC--------CSCCHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc--------cccCHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 578888731 24688888888 777777999999999875421 1235566667888888875 7899999
Q ss_pred ECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 225 MTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 225 l~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
.+..++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 198 aN~~~~~~~A~~~~~~L~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~--- 241 (393)
T 4dwd_A 198 ANNGYSVGGAIRVGRALEDLGYSWFE----------------EPVQ-----------------HYHVGAMGEVAQRL--- 241 (393)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSEEE----------------CCSC-----------------TTCHHHHHHHHHHC---
T ss_pred CCCCCCHHHHHHHHHHHHhhCCCEEE----------------CCCC-----------------cccHHHHHHHHhhC---
Confidence 877664 345678889999887762 2221 11234455677765
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
++||++...+.+.+|+.+++..|+|.|++--.-
T Consensus 242 ----~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~~ 274 (393)
T 4dwd_A 242 ----DITVSAGEQTYTLQALKDLILSGVRMVQPDIVK 274 (393)
T ss_dssp ----SSEEEBCTTCCSHHHHHHHHHHTCCEECCCTTT
T ss_pred ----CCCEEecCCcCCHHHHHHHHHcCCCEEEeCccc
Confidence 799999999999999999999889999986544
No 204
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.57 E-value=0.001 Score=61.28 Aligned_cols=129 Identities=16% Similarity=0.210 Sum_probs=75.2
Q ss_pred HHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEE
Q 014581 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249 (422)
Q Consensus 170 ~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v 249 (422)
+++.++|+|++-|.-+ +|. ...+.+.+.++..++. ++-+++=+.+. .+ .+.+.+.|.+.|-+
T Consensus 76 ~~~~~~Gad~Vll~~s------er~------l~~~e~~~~~~~a~~~-Gl~~iv~v~~~----~e-~~~~~~~~~~~i~~ 137 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHS------EKR------MLLADIEAVINKCKNL-GLETIVCTNNI----NT-SKAVAALSPDCIAV 137 (219)
T ss_dssp HHHHHHTCCEEEESBT------TBC------CBHHHHHHHHHHHHHH-TCEEEEEESSS----HH-HHHHTTTCCSEEEE
T ss_pred HHHHHcCCCEEEECCc------ccc------CCHHHHHHHHHHHHHC-CCeEEEEeCCc----hH-HHHHHhCCCCEEEE
Confidence 5566789999998532 111 1123466666666655 55555555442 22 34556667775555
Q ss_pred ecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh-HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHh
Q 014581 250 INTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI-ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328 (422)
Q Consensus 250 ~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~-al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~a 328 (422)
.+++.-..+..+.+. .|. ....+..+++.. . ++||+..|||.+++++..+...
T Consensus 138 ~~~~~iGtG~~~~t~--------------------~~~~~~~~~~~ir~~~-~-----~~~ii~ggGI~~~~~~~~~~~~ 191 (219)
T 2h6r_A 138 EPPELIGTGIPVSKA--------------------NPEVVEGTVRAVKEIN-K-----DVKVLCGAGISKGEDVKAALDL 191 (219)
T ss_dssp CCCC----------------------------------CSHHHHHHHHHHC-T-----TCEEEECSSCCSHHHHHHHHTT
T ss_pred EeccccccCCCCccC--------------------CHHHHHHHHHHHHhcc-C-----CCeEEEEeCcCcHHHHHHHhhC
Confidence 443320011000000 011 112233344332 1 6999999999999999999999
Q ss_pred CCCEEEEhhHHHhh
Q 014581 329 GANTVQVCTGVMMH 342 (422)
Q Consensus 329 GAd~V~vgtall~~ 342 (422)
|||+|-+|++++..
T Consensus 192 gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 192 GAEGVLLASGVVKA 205 (219)
T ss_dssp TCCCEEESHHHHTC
T ss_pred CCCEEEEcHHHhCc
Confidence 99999999999975
No 205
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.56 E-value=0.00069 Score=68.06 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=105.8
Q ss_pred CeEEEEeCC--CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEE
Q 014581 150 KILIASIME--EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~~--~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
.|+..+++. +.+++++.+.++++.+.|++.++++++.+ +++...+++++||+.+ +++|.+..
T Consensus 162 vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~d~e~v~avR~avG~d~~l~vDa 227 (398)
T 2pp0_A 162 VQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQP--------------NCAEDIRRLTAVREALGDEFPLMVDA 227 (398)
T ss_dssp EEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCS--------------CHHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred eeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCC--------------CHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 355555422 23788998888888888999999987532 3455667788888875 78999998
Q ss_pred CCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 226 TPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 226 ~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
...++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 228 n~~~~~~~ai~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~---- 270 (398)
T 2pp0_A 228 NQQWDRETAIRMGRKMEQFNLIWIE----------------EPLD-----------------AYDIEGHAQLAAAL---- 270 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGTCSCEE----------------CCSC-----------------TTCHHHHHHHHHHC----
T ss_pred CCCCCHHHHHHHHHHHHHcCCceee----------------CCCC-----------------hhhHHHHHHHHhhC----
Confidence 76554 345677778888877552 1211 11234556677765
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++--.-. .|..-..+ +.++.+++|+.
T Consensus 271 ---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGite~~~----i~~~A~~~gi~ 324 (398)
T 2pp0_A 271 ---DTPIATGEMLTSFREHEQLILGNASDFVQPDAPRV-GGISPFLK----IMDLAAKHGRK 324 (398)
T ss_dssp ---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH-TSHHHHHH----HHHHHHHTTCE
T ss_pred ---CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHH----HHHHHHHcCCe
Confidence 79999999999999999999876 78998754332 23332222 23455677764
No 206
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=97.55 E-value=0.00083 Score=67.59 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEcc------CCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCC--
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNF------SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT-- 230 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~------scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~-- 230 (422)
+++++.+.++++.+.|++.+++++ +++...+.. |.....+.+...+++++||+.+ +++|.+.....++
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~--~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~ 229 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLN--GPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTT 229 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCC--SSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCccc--CCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH
Confidence 788999989888888999999986 221100001 1111124466678888888875 7899999876554
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..++++.+.+.|++.|. +|.+ +..++..+++++.+ ++||
T Consensus 230 ~a~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~~-------~iPI 269 (407)
T 2o56_A 230 SAIQFGRMIEELGIFYYE----------------EPVM-----------------PLNPAQMKQVADKV-------NIPL 269 (407)
T ss_dssp HHHHHHHHHGGGCCSCEE----------------CSSC-----------------SSSHHHHHHHHHHC-------CSCE
T ss_pred HHHHHHHHHHhcCCCEEe----------------CCCC-----------------hhhHHHHHHHHHhC-------CCCE
Confidence 345777888888877552 1211 11245556677765 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEhh
Q 014581 311 SGIGGVETGGDAAEFILLG-ANTVQVCT 337 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aG-Ad~V~vgt 337 (422)
++.+.+.+.+++.+++..| +|.|++=-
T Consensus 270 a~dE~~~~~~~~~~~i~~~~~d~v~ik~ 297 (407)
T 2o56_A 270 AAGERIYWRWGYRPFLENGSLSVIQPDI 297 (407)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 9999999999999999877 78998753
No 207
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.54 E-value=0.0028 Score=58.85 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=83.4
Q ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 151 ILIASIMEE-----YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 151 pvi~si~~~-----~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
-+|+|...- +++++..++|+.++++|+.+|.++ + .+.++++|+.+++||+-..
T Consensus 19 ~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-----~-----------------~~~i~~ir~~v~~Pvig~~ 76 (229)
T 3q58_A 19 GLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE-----G-----------------IENLRTVRPHLSVPIIGII 76 (229)
T ss_dssp CEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE-----S-----------------HHHHHHHGGGCCSCEEEEC
T ss_pred CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC-----C-----------------HHHHHHHHHhcCCCEEEEE
Confidence 488888521 247888999999999999999874 1 1346788888999987322
Q ss_pred CC-------CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh-HHHHHHHHHH
Q 014581 226 TP-------NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI-ALGKVMSIAK 297 (422)
Q Consensus 226 ~~-------~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~-al~~v~~i~~ 297 (422)
.. .++...+-++.+.++|+|.|.+..+... + |. ..+.++.+++
T Consensus 77 k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~---------~--------------------p~~l~~~i~~~~~ 127 (229)
T 3q58_A 77 KRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS---------R--------------------PVDIDSLLTRIRL 127 (229)
T ss_dssp BCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC---------C--------------------SSCHHHHHHHHHH
T ss_pred eecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC---------C--------------------hHHHHHHHHHHHH
Confidence 21 1222344577889999998866543211 0 11 1233444443
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
. ++++++ .+.+.+++.++..+|||.|.+
T Consensus 128 ~--------g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 128 H--------GLLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp T--------TCEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred C--------CCEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 1 565554 699999999999999999964
No 208
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.54 E-value=6.5e-05 Score=67.76 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhh
Q 014581 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344 (422)
Q Consensus 290 ~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp 344 (422)
+.++++++.+ ++|||+.|+|++.+|+.+++.+||++|..++.-+|+|.
T Consensus 140 ~iI~~i~~~~-------~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~~ 187 (192)
T 3kts_A 140 EQVQKMTQKL-------HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH 187 (192)
T ss_dssp HHHHHHHHHH-------CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTTC
T ss_pred HHHHHHHHhc-------CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCcc
Confidence 5677888876 89999999999999999999999999999999999874
No 209
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=97.52 E-value=0.00076 Score=67.76 Aligned_cols=147 Identities=14% Similarity=0.069 Sum_probs=99.1
Q ss_pred CeEEEE-eC-C-C------CCHHHHHHHHHHHHHhCCCEEEEcc------CCCCCCCccccccccccChhHHHHHHHHHh
Q 014581 150 KILIAS-IM-E-E------YNKAAWEELIDRVEETGIDAIEVNF------SCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214 (422)
Q Consensus 150 ~pvi~s-i~-~-~------~~~~~~~~~a~~~~~aGaD~iElN~------scP~~~~~~~~G~~l~~~~~~v~~iv~~vr 214 (422)
.|+..+ +. + + .+++++.+.++++.+.|++.+++++ +++...+. .|.....+.+...+++++||
T Consensus 126 vp~y~~~i~~g~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~--~g~~~~~~~~~~~e~v~avr 203 (403)
T 2ox4_A 126 LRVYASQLQFGWGKERKSKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFL--EGPLPSETIKIGVERVEAIR 203 (403)
T ss_dssp EEEEEECGGGCSSSSCCCCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCC--SSSCCHHHHHHHHHHHHHHH
T ss_pred eeeeEeeccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcc--cCCCchHHHHHHHHHHHHHH
Confidence 477766 63 1 2 1789999888888888999999996 33211111 11111234466678888888
Q ss_pred hcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 215 AKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 215 ~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
+.+ +++|.+.....++ +..++++.+.+.|++.|. +|.+ +..++
T Consensus 204 ~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE----------------~P~~-----------------~~d~~ 250 (403)
T 2ox4_A 204 NAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYE----------------EINT-----------------PLNPR 250 (403)
T ss_dssp HHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE----------------CCSC-----------------TTSTH
T ss_pred HHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEe----------------CCCC-----------------hhhHH
Confidence 875 7899999876554 345677778777766542 1211 11124
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhH
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTG 338 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgta 338 (422)
..+++++.+ ++||++.+.+.+.+++.+++..| +|.|++--.
T Consensus 251 ~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 292 (403)
T 2ox4_A 251 LLKEAKKKI-------DIPLASGERIYSRWGFLPFLEDRSIDVIQPDLG 292 (403)
T ss_dssp HHHHHHHTC-------CSCEEECTTCCHHHHHHHHHHTTCCSEECCCHH
T ss_pred HHHHHHHhC-------CCCEEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 455666655 79999999999999999999876 789988643
No 210
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.50 E-value=0.0079 Score=57.59 Aligned_cols=202 Identities=14% Similarity=0.136 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCC
Q 014581 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148 (422)
Q Consensus 69 ~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~ 148 (422)
.++-..+.+.++||-++-+++.... ....|+++.+.+ ++++++..++.+.+..
T Consensus 29 ~D~~sA~i~e~aGf~ai~vs~s~~a-----------------------~~~lG~pD~~~v---t~~em~~~~~~I~r~~- 81 (287)
T 3b8i_A 29 FDPMSARIAADLGFECGILGGSVAS-----------------------LQVLAAPDFALI---TLSEFVEQATRIGRVA- 81 (287)
T ss_dssp CSHHHHHHHHHTTCSCEEECHHHHH-----------------------HHHHSCCSSSCS---CHHHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHcCCCEEEeCcHHHH-----------------------HHhcCCCCCCCC---CHHHHHHHHHHHHhcC-
Confidence 3577777778899988877654210 012455554433 3889999898888754
Q ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEccCC-CCCCCccccccccccChhHHHHHHHHHhhcc---CccEEE
Q 014581 149 DKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVNFSC-PHGMPERKMGAAVGQDCRLLEEVCGWINAKA---TVPVWA 223 (422)
Q Consensus 149 ~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN~sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~---~iPv~v 223 (422)
+.||++-+-.++ +++...+.+++++++|+++|.|.=.. |..-.+ .-|. + .+.+...+-+++++++- +.-|..
T Consensus 82 ~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh-~~gk-l-~~~~e~~~~I~aa~~a~~~~~~~i~a 158 (287)
T 3b8i_A 82 RLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGR-KSTD-L-ICVEEGVGKIRAALEARVDPALTIIA 158 (287)
T ss_dssp SSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTT-CTTC-B-CCHHHHHHHHHHHHHHCCSTTSEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCC-CCCC-c-cCHHHHHHHHHHHHHcCCCCCcEEEE
Confidence 789988885444 67788889999999999999886332 221000 1122 2 33444444555555442 344556
Q ss_pred EECCCC----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 224 KMTPNI----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 224 Kl~~~~----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
|.-. . .+..+-++++.++|||+|.+... . +.+.++++.+.+
T Consensus 159 Rtda-a~~gl~~ai~Ra~ay~eAGAd~i~~e~~-~---------------------------------~~~~~~~i~~~~ 203 (287)
T 3b8i_A 159 RTNA-ELIDVDAVIQRTLAYQEAGADGICLVGV-R---------------------------------DFAHLEAIAEHL 203 (287)
T ss_dssp EEET-TTSCHHHHHHHHHHHHHTTCSEEEEECC-C---------------------------------SHHHHHHHHTTC
T ss_pred echh-hhcCHHHHHHHHHHHHHcCCCEEEecCC-C---------------------------------CHHHHHHHHHhC
Confidence 6533 2 23556678889999999987641 1 123455666655
Q ss_pred hccCCCCCceEEEe-cCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 300 KSEFNDKDYSLSGI-GGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 300 ~~~~~~~~ipIIa~-GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++|++.. ||-...-++.++-.+|...|..+..++..
T Consensus 204 -------~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 204 -------HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp -------CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred -------CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 6787732 33332334567778999999999887754
No 211
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.48 E-value=0.00083 Score=66.92 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=98.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+.+++....+++++.+.++++.+.|++.+.++++++. .+++...+.+++||+.+ +.+|.+..+.
T Consensus 135 v~~y~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~g------------~~~~~d~~~v~avR~a~g~~~~l~vDan~ 202 (374)
T 3sjn_A 135 IRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMG------------DDPDTDYAIVKAVREAAGPEMEVQIDLAS 202 (374)
T ss_dssp EEEEEEECCCSSGGGGHHHHHHHHTTTCSEEEEECTTTT------------SCHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEeccCCCC------------CCHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 455544432123478888888888889999999997652 23455667788888875 7899999887
Q ss_pred CCCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 228 NITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 228 ~~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
.+++ ..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 203 ~~~d~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~----- 244 (374)
T 3sjn_A 203 KWHTCGHSAMMAKRLEEFNLNWIE----------------EPVL-----------------ADSLISYEKLSRQV----- 244 (374)
T ss_dssp TTCSHHHHHHHHHHSGGGCCSEEE----------------CSSC-----------------TTCHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHhhhcCceEEE----------------CCCC-----------------cccHHHHHHHHhhC-----
Confidence 7763 35667777788877662 2221 11234556677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHh-CCCEEEEhhHH
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILL-GANTVQVCTGV 339 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~a-GAd~V~vgtal 339 (422)
++||++.+.+.+.+|+.+++.. .+|.||+--..
T Consensus 245 --~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 278 (374)
T 3sjn_A 245 --SQKIAGGESLTTRYEFQEFITKSNADIVQPDITR 278 (374)
T ss_dssp --SSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTT
T ss_pred --CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 7999999999999999999986 58999876543
No 212
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=97.48 E-value=0.0025 Score=63.82 Aligned_cols=154 Identities=12% Similarity=0.070 Sum_probs=104.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..+++ ..+++++.+.++++.+.|++.++++++. +++...+++++||+.+ +++|.+....
T Consensus 135 vp~~~~~g-~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLG-AGEPEAVAEEALAVLREGFHFVKLKAGG---------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECC-CSCHHHHHHHHHHHHHHTCSCEEEECCS---------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECC-CCCHHHHHHHHHHHHHhhhhheeecccC---------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 45666663 2578888888888888899999998642 3345567788888875 7899999776
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~------ 239 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIE----------------QPLP-----------------AWDLDGMARLRGKV------ 239 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEE----------------CCSC-----------------TTCHHHHHHHHTTC------
T ss_pred CCCHHHHHHHHHHHHhCCCCEEE----------------CCCC-----------------hhhHHHHHHHHhhC------
Confidence 554 345677888888877552 1211 11234445566554
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++=-.-. .|..-..++ .++.+++|+.
T Consensus 240 -~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 293 (397)
T 2qde_A 240 -ATPIYADESAQELHDLLAIINKGAADGLMIKTQKA-GGLLKAQRW----LTLARLANLP 293 (397)
T ss_dssp -SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH----HHHHHHHTCC
T ss_pred -CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHH----HHHHHHcCCe
Confidence 79999999999999999999876 89999864332 233333333 2344556653
No 213
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=97.47 E-value=0.0015 Score=60.66 Aligned_cols=149 Identities=17% Similarity=0.116 Sum_probs=85.3
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTP 227 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~ 227 (422)
+.+++.-+.-...++....+++.+.++|+|++.+|..+. .+.++..++.+++.- .+.+...++.
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G---------------~~~l~~~~~~~~~~g~~v~vLt~~s~ 128 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPG---------------ADSVRACLNVAEEMGREVFLLTEMSH 128 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC---------------HHHHHHHHHHHHHHTCEEEEECCCCS
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCC---------------HHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 567887775333355555667777788999999985321 234555666655432 2222223332
Q ss_pred C-CCC-----hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhc
Q 014581 228 N-ITD-----ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKS 301 (422)
Q Consensus 228 ~-~~~-----~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~ 301 (422)
. ..+ ...+++.+.+.|++|+++..+. | +.++++++.++.
T Consensus 129 ~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~--------------------------------~---~e~~~ir~~~~~ 173 (228)
T 3m47_A 129 PGAEMFIQGAADEIARMGVDLGVKNYVGPSTR--------------------------------P---ERLSRLREIIGQ 173 (228)
T ss_dssp GGGGTTHHHHHHHHHHHHHHTTCCEEECCSSC--------------------------------H---HHHHHHHHHHCS
T ss_pred ccHHHHHHHHHHHHHHHHHHhCCcEEEECCCC--------------------------------h---HHHHHHHHhcCC
Confidence 1 111 2457778889999998755321 1 234567777642
Q ss_pred cCCCCCceEEEecCCCCH-HHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHH
Q 014581 302 EFNDKDYSLSGIGGVETG-GDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEEL 354 (422)
Q Consensus 302 ~~~~~~ipIIa~GGI~s~-~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l 354 (422)
++++ .++||.-. .+. +++.+|||.+.+||+++.. .| ..++++.+++
T Consensus 174 -----~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~~~ 222 (228)
T 3m47_A 174 -----DSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIESI 222 (228)
T ss_dssp -----SSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHHHC
T ss_pred -----CCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHHHH
Confidence 3655 77888532 267 8889999999999999874 13 2345555444
No 214
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=97.47 E-value=0.0013 Score=65.89 Aligned_cols=156 Identities=9% Similarity=0.009 Sum_probs=103.6
Q ss_pred CeEEEEeCC---CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEE
Q 014581 150 KILIASIME---EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAK 224 (422)
Q Consensus 150 ~pvi~si~~---~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vK 224 (422)
.|+..+... +.+++++.+.++++.+.|++.+.++++++ +++...+++++||+.+ +++|.+.
T Consensus 151 v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vD 216 (392)
T 1tzz_A 151 VFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGA--------------PIEEDRMRIEAVLEEIGKDAQLAVD 216 (392)
T ss_dssp EEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSS--------------CHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred eeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC--------------CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 366554321 12788888888888888999999998652 2344557777887765 6899998
Q ss_pred ECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 225 MTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 225 l~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
....++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 217 an~~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~--- 260 (392)
T 1tzz_A 217 ANGRFNLETGIAYAKMLRDYPLFWYE----------------EVGD-----------------PLDYALQAALAEFY--- 260 (392)
T ss_dssp CTTCCCHHHHHHHHHHHTTSCCSEEE----------------CCSC-----------------TTCHHHHHHHTTTC---
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeec----------------CCCC-----------------hhhHHHHHHHHhhC---
Confidence 876554 345677778778877652 1211 11234444555544
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhC-----CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLG-----ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aG-----Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++--... .|..-..++ .++.+++|+.
T Consensus 261 ----~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~gi~ 318 (392)
T 1tzz_A 261 ----PGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALS-YGLCEYQRT----LEVLKTHGWS 318 (392)
T ss_dssp ----CSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTT-TCHHHHHHH----HHHHHHTTCC
T ss_pred ----CCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECcccc-CCHHHHHHH----HHHHHHCCCC
Confidence 79999999999999999999988 89999864332 233323333 3455667764
No 215
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=97.46 E-value=0.0011 Score=66.86 Aligned_cols=143 Identities=8% Similarity=-0.055 Sum_probs=100.9
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
..|+.+++. ..+++++.+.++.+.+.|+..+-+ +++|..... ....+++...+++++||+.+ +++|.+..+
T Consensus 114 ~v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~-----~~~~~~~~d~e~v~avR~avG~d~~L~vDaN 186 (405)
T 3rr1_A 114 KMRTYSWVG-GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII-----DTSRAVDAAVARVAEIRSAFGNTVEFGLDFH 186 (405)
T ss_dssp CEEEEEECC-CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB-----CSHHHHHHHHHHHHHHHHTTGGGSEEEEECC
T ss_pred ceeeeEeCC-CCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc-----ccchhHHHHHHHHHHHHHHhCCCceEEEECC
Confidence 357888885 568899988888888889999999 777642100 01123455567788888876 789999877
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 187 ~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~----- 228 (405)
T 3rr1_A 187 GRVSAPMAKVLIKELEPYRPLFIE----------------EPVL-----------------AEQAETYARLAAHT----- 228 (405)
T ss_dssp SCBCHHHHHHHHHHHGGGCCSCEE----------------CSSC-----------------CSSTHHHHHHHTTC-----
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhcC-----
Confidence 6554 345677888888877662 2221 11123445566554
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhH
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTG 338 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgta 338 (422)
++||++.+.+.+.+|+.+++..| +|.||+--.
T Consensus 229 --~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 229 --HLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp --SSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred --CCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 79999999999999999999876 789998644
No 216
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.42 E-value=0.0045 Score=57.49 Aligned_cols=124 Identities=16% Similarity=0.169 Sum_probs=82.5
Q ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 151 ILIASIMEE-----YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 151 pvi~si~~~-----~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
-+|+|...- +++.+..++|+.+++.|+.+|.++ + .+.++++|+.+++||+-..
T Consensus 19 ~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-----~-----------------~~~i~~ir~~v~~Pvig~~ 76 (232)
T 3igs_A 19 GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE-----G-----------------IDNLRMTRSLVSVPIIGII 76 (232)
T ss_dssp CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE-----S-----------------HHHHHHHHTTCCSCEEEEC
T ss_pred CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC-----C-----------------HHHHHHHHHhcCCCEEEEE
Confidence 488888521 247788999999999999999874 1 1346778888899996322
Q ss_pred CC-------CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh-HHHHHHHHHH
Q 014581 226 TP-------NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI-ALGKVMSIAK 297 (422)
Q Consensus 226 ~~-------~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~-al~~v~~i~~ 297 (422)
.. .++...+-++.+.++|+|.|.+..+... + |. ..++++.+++
T Consensus 77 k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~---------~--------------------p~~l~~~i~~~~~ 127 (232)
T 3igs_A 77 KRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ---------R--------------------PVAVEALLARIHH 127 (232)
T ss_dssp BCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC---------C--------------------SSCHHHHHHHHHH
T ss_pred eecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC---------C--------------------HHHHHHHHHHHHH
Confidence 21 1222344577889999998876543211 0 11 1133444433
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
. ++++++ .+.+.+++.++..+|||.|.+
T Consensus 128 ~--------g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 128 H--------HLLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp T--------TCEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred C--------CCEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 1 455554 699999999999999999964
No 217
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.40 E-value=0.0044 Score=57.29 Aligned_cols=134 Identities=15% Similarity=0.123 Sum_probs=84.7
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
++++=+. ..+.+++.+.++.+.+.|++.||+-+..|. ..+.++.+++.. ++-+..-. +
T Consensus 27 ~ii~V~r-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~~~~igagt---v 85 (225)
T 1mxs_A 27 RILPVIT-IAREEDILPLADALAAGGIRTLEVTLRSQH-----------------GLKAIQVLREQRPELCVGAGT---V 85 (225)
T ss_dssp SEEEEEC-CSCGGGHHHHHHHHHHTTCCEEEEESSSTH-----------------HHHHHHHHHHHCTTSEEEEEC---C
T ss_pred CEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEecCCcc-----------------HHHHHHHHHHhCcccEEeeCe---E
Confidence 5666564 457788899999999999999999753221 123444444443 33333332 2
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
- ..+-++.+.++|+|+++.-+ .| .. +.+.++.+ +++
T Consensus 86 l-~~d~~~~A~~aGAd~v~~p~-------~d----------------------------~~-v~~~~~~~-------g~~ 121 (225)
T 1mxs_A 86 L-DRSMFAAVEAAGAQFVVTPG-------IT----------------------------ED-ILEAGVDS-------EIP 121 (225)
T ss_dssp C-SHHHHHHHHHHTCSSEECSS-------CC----------------------------HH-HHHHHHHC-------SSC
T ss_pred e-eHHHHHHHHHCCCCEEEeCC-------CC----------------------------HH-HHHHHHHh-------CCC
Confidence 2 24678899999999996221 01 11 22334443 566
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+|. |+.|++++.+++.+|||.|.+..+-...|+.+++.+.
T Consensus 122 ~i~--G~~t~~e~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~ 161 (225)
T 1mxs_A 122 LLP--GISTPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFG 161 (225)
T ss_dssp EEC--EECSHHHHHHHHTTTCCEEEETTHHHHTHHHHHHHHH
T ss_pred EEE--eeCCHHHHHHHHHCCCCEEEEccCccccCHHHHHHHH
Confidence 664 4999999999999999999995532222566555554
No 218
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.026 Score=54.10 Aligned_cols=161 Identities=15% Similarity=0.110 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.+++.|+|++-+. .|... ..+.+.+.+..+
T Consensus 52 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 119 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEAIAFVRHAQNAGADGVLIV--SPYYN---------KPTQEGIYQHFK 119 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHHHHHHHHcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5677888999999999999999765 34321 124466778888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHH-c-CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcch
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALR-S-GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~-a-Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p 286 (422)
.|.+.+++||++--.|. +.-..+...++.+ . .+-||.-+ .|.+
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s-------------------------~gd~------- 167 (292)
T 2vc6_A 120 AIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDA-------------------------TGNL------- 167 (292)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC-------------------------SCCT-------
T ss_pred HHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecC-------------------------CCCH-------
Confidence 88888899999876442 1112344444444 3 22222211 1111
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
..+.++++..++ ++.|+ +| +-+.+..++.+||+++..+++-+. |..+.++.
T Consensus 168 ---~~~~~~~~~~~~-----~f~v~-~G---~d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~ 218 (292)
T 2vc6_A 168 ---LRPSLERMACGE-----DFNLL-TG---EDGTALGYMAHGGHGCISVTANVA--PALCADFQ 218 (292)
T ss_dssp ---HHHHHHHHHSCT-----TSEEE-ES---CGGGHHHHHHTTCCEEEESGGGTC--HHHHHHHH
T ss_pred ---HHHHHHHHHcCC-----CEEEE-EC---chHHHHHHHHcCCCEEEecHHHhC--HHHHHHHH
Confidence 234455555432 56665 44 234478889999999988877653 44444443
No 219
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.39 E-value=0.0033 Score=57.73 Aligned_cols=153 Identities=16% Similarity=0.148 Sum_probs=96.0
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCC-CCCCccccccccccChhHHHHHHHHHhhccC
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCP-HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP-~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~ 218 (422)
++.+++.. +.+|+.-+.-+--+......++.+.+. +|++.+|.+.. .. .++.. +. +
T Consensus 42 v~~L~~~~-g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~~~---------------~~~~~-~~-----~ 98 (215)
T 3ve9_A 42 VKELVGLV-DGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGVEG---------------SLASL-SQ-----R 98 (215)
T ss_dssp HHHHHTTC-CSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCTTT---------------THHHH-HH-----H
T ss_pred HHHHHHhc-CCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCcHH---------------HHHhH-hc-----C
Confidence 44555432 789998886433344445566777788 99999985432 11 11111 11 1
Q ss_pred ccEEEEECCCCCC-----hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHH
Q 014581 219 VPVWAKMTPNITD-----ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293 (422)
Q Consensus 219 iPv~vKl~~~~~~-----~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~ 293 (422)
.-|++=.+.+-.+ ..++++.+.++|++|+++..+- | .-++
T Consensus 99 ~~v~vLts~s~~~~~~~~v~~~a~~a~~~G~~GvV~sat~--------------------------------~---~e~~ 143 (215)
T 3ve9_A 99 VDLFLVLSMSHPGWNDAFYPYLREVARRVNPKGFVAPATR--------------------------------P---SMIS 143 (215)
T ss_dssp SEEEEECCCSSTTCCGGGHHHHHHHHHHHCCSEEECCTTS--------------------------------H---HHHH
T ss_pred CCEEEEEecCCcchHHHHHHHHHHHHHHcCCCceeeCCCC--------------------------------H---HHHH
Confidence 1133211211111 5678889999999999876432 1 1244
Q ss_pred HHHHHhhccCCCCCceEEEecCCCCHH--HHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHHHHH
Q 014581 294 SIAKMMKSEFNDKDYSLSGIGGVETGG--DAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELKDFM 358 (422)
Q Consensus 294 ~i~~~~~~~~~~~~ipIIa~GGI~s~~--da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~~~m 358 (422)
.+++.++ + .++.++||. ++ +..+++.+|||.+.+||+++.. .| ..++++.+++++++
T Consensus 144 ~ir~~~~------~-f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 144 RVKGDFP------D-KLVISPGVG-TQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp HHHHHCT------T-SEEEECCTT-STTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHhCC------C-cEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 5677663 5 688899997 34 6778889999999999999974 23 35777777776554
No 220
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.37 E-value=0.0037 Score=65.21 Aligned_cols=105 Identities=10% Similarity=0.188 Sum_probs=64.4
Q ss_pred HHHHHHHHHcC---CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 233 TEPARVALRSG---SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 233 ~~~a~~l~~aG---adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.+-+..+.+.| +|+|.+.--+.. .+ + .+... .|..++.++++++.+... ...++|
T Consensus 118 ~eea~~A~~~G~~~aDYv~~Gpvf~T------~t-K-----------~~~~~---~~~G~~~l~~i~~~~~~~-~~~~iP 175 (540)
T 3nl6_A 118 PEEVDELSKMGPDMVDYIGVGTLFPT------LT-K-----------KNPKK---APMGTAGAIRVLDALERN-NAHWCR 175 (540)
T ss_dssp HHHHHHHHHTCC--CCEEEESCCSCC------CC-C-----------C-------CCCHHHHHHHHHHHHHHT-TCTTCE
T ss_pred HHHHHHHHHcCCCCCCEEEEcCCCCC------CC-C-----------CCcCC---CCCCHHHHHHHHHHHHhh-ccCCCC
Confidence 34567788899 999976432211 01 0 11100 133455566666654210 002799
Q ss_pred EEEecCCCCHHHHHHHHH--------hCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcC
Q 014581 310 LSGIGGVETGGDAAEFIL--------LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~--------aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G 362 (422)
+++.||| +++++.+.+. +||++|.++|+++.. ++ +....++|.+.+++..
T Consensus 176 vvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a-~d-p~~a~~~l~~~~~~~~ 233 (540)
T 3nl6_A 176 TVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIAS-LD-AAKSTKILRGLIDKTD 233 (540)
T ss_dssp EEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTC-TT-HHHHHHHHHHHHHCCB
T ss_pred EEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcC-CC-HHHHHHHHHHHHHhCC
Confidence 9999999 7899999998 799999999999974 33 2333445555555544
No 221
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=97.36 E-value=0.022 Score=53.98 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=89.7
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+-.. .++-..+.+.++|+-++-++.-.. ...+|+++.+.+ ++++++
T Consensus 17 ~~i~~~ta---yDa~sA~l~e~aG~d~ilvGdSl~------------------------~~~lG~~dt~~v---Tldemi 66 (275)
T 1o66_A 17 EKIAMLTA---YESSFAALMDDAGVEMLLVGDSLG------------------------MAVQGRKSTLPV---SLRDMC 66 (275)
T ss_dssp CCEEEEEC---CSHHHHHHHHHTTCCEEEECTTHH------------------------HHTTCCSSSTTC---CHHHHH
T ss_pred CcEEEEeC---cCHHHHHHHHHcCCCEEEECHHHH------------------------HHHcCCCCCCCC---CHHHHH
Confidence 35654433 457777878889999886652110 113455544433 388988
Q ss_pred HHHHHHHhhCCCCeEEEEeCC-CC--CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHh
Q 014581 138 KEFKQLKALYPDKILIASIME-EY--NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~-~~--~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr 214 (422)
...+.+.+..+..+|++-+.. ++ ++++..+.+.++.++|+++|-|-=+ +...+.++++.
T Consensus 67 ~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg------------------~e~~~~I~al~ 128 (275)
T 1o66_A 67 YHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG------------------VWMAETTEFLQ 128 (275)
T ss_dssp HHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS------------------GGGHHHHHHHH
T ss_pred HHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc------------------HHHHHHHHHHH
Confidence 888888876534466666643 33 5888888888888899999977521 12333444444
Q ss_pred hccCccEEEE--ECCCC----------------CChHHHHHHHHHcCCCEEEEec
Q 014581 215 AKATVPVWAK--MTPNI----------------TDITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 215 ~~~~iPv~vK--l~~~~----------------~~~~~~a~~l~~aGadgi~v~n 251 (422)
+. .+||+.= |+|.. .++.+-|++++++||++|++-.
T Consensus 129 ~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 129 MR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp HT-TCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred Hc-CCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 43 7888722 22210 1245567788999999997654
No 222
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.35 E-value=0.0094 Score=59.42 Aligned_cols=155 Identities=12% Similarity=0.070 Sum_probs=106.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++. ..++++..+.++...+. |+..+-+.++++ +++.-.+.+++||+.+ +++|.+..+
T Consensus 138 v~~~~t~~-~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALG-VLPLDVAVAEIEERIEEFGNRSFKLKMGAG--------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEEC-SCCHHHHHHHHHHHHHHHCCSEEEEECCSS--------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEee-CCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 35556664 34677777766666555 999999998642 2344456788888876 689999987
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ +..+...+++++..
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~----- 244 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFE----------------QPTP-----------------ADDLETLREITRRT----- 244 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEE----------------SCSC-----------------TTCHHHHHHHHHHH-----
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------hhhHHHHHHHHhhC-----
Confidence 7665 345678889999988773 1221 11234456677766
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++. .+.+.+|+.
T Consensus 245 --~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~ia----~~A~~~gi~ 298 (383)
T 3i4k_A 245 --NVSVMADESVWTPAEALAVVKAQAADVIALKTTKH-GGLLESKKIA----AIAEAGGLA 298 (383)
T ss_dssp --CCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTT-TSHHHHHHHH----HHHHHTTCE
T ss_pred --CCCEEecCccCCHHHHHHHHHcCCCCEEEEccccc-CCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999877 89999875443 2344444433 344556653
No 223
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.34 E-value=0.0032 Score=58.11 Aligned_cols=116 Identities=14% Similarity=0.062 Sum_probs=79.3
Q ss_pred HH--HHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC-------CCCh
Q 014581 162 KA--AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN-------ITDI 232 (422)
Q Consensus 162 ~~--~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~-------~~~~ 232 (422)
++ +..++++.++++|+++++++ + + +.++.+|+.+++|++--+..+ +...
T Consensus 33 ~~~~~~~~~a~~~~~~G~~~i~~~-----~-------------~----~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~ 90 (234)
T 1yxy_A 33 ETGGIMPLMAKAAQEAGAVGIRAN-----S-------------V----RDIKEIQAITDLPIIGIIKKDYPPQEPFITAT 90 (234)
T ss_dssp TTCCSHHHHHHHHHHHTCSEEEEE-----S-------------H----HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCS
T ss_pred CccchHHHHHHHHHHCCCcEeecC-----C-------------H----HHHHHHHHhCCCCEEeeEcCCCCccccccCCh
Confidence 56 77889999999999999876 1 1 236677777899984222121 1234
Q ss_pred HHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEE
Q 014581 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSG 312 (422)
Q Consensus 233 ~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa 312 (422)
.+.++.+.++|+|.|.++..... +| .+. ...+.++.+++.++ +++|+.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~---------~~---------~~~--------~~~~~i~~i~~~~~------~~~v~~ 138 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRD---------RH---------DGL--------DIASFIRQVKEKYP------NQLLMA 138 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSC---------CT---------TCC--------CHHHHHHHHHHHCT------TCEEEE
T ss_pred HHHHHHHHHcCCCEEEEcccccC---------CC---------CCc--------cHHHHHHHHHHhCC------CCeEEE
Confidence 56788899999999987754311 00 000 12466777777653 455544
Q ss_pred ecCCCCHHHHHHHHHhCCCEE
Q 014581 313 IGGVETGGDAAEFILLGANTV 333 (422)
Q Consensus 313 ~GGI~s~~da~~~l~aGAd~V 333 (422)
++.+.+++.++..+|||.|
T Consensus 139 --~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 139 --DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp --ECSSHHHHHHHHHTTCSEE
T ss_pred --eCCCHHHHHHHHHcCCCEE
Confidence 7899999999999999999
No 224
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.34 E-value=0.0057 Score=59.99 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=92.8
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPN 228 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~ 228 (422)
.|+..++. ..+++++.+.++++.+.|++.+.+++++ +++.-.+++++||+.. ++++.+-....
T Consensus 129 v~~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 129 IETDKTVG-IDTVENRVKEAKKIFEEGFRVIKIKVGE---------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EEBCEEEC-SCCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeeEEec-CCCHHHHHHHHHHHHHcCcCEEEEeecC---------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 35556664 3478888888888888899999998753 2333445677777763 57787766554
Q ss_pred CC--ChHHHHHHHHHcCCC--EEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 229 IT--DITEPARVALRSGSE--GVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 229 ~~--~~~~~a~~l~~aGad--gi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
++ +..++++.+.+.|++ .|. +|.+ +..++..+++++.+
T Consensus 193 ~~~~~a~~~~~~l~~~~i~~~~iE----------------~P~~-----------------~~~~~~~~~l~~~~----- 234 (345)
T 2zad_A 193 YTQKEAVEFARAVYQKGIDIAVYE----------------QPVR-----------------REDIEGLKFVRFHS----- 234 (345)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHS-----
T ss_pred CCHHHHHHHHHHHHhcCCCeeeee----------------CCCC-----------------cccHHHHHHHHHhC-----
Confidence 43 345778888888887 542 2211 11234556677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEh
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVC 336 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vg 336 (422)
++||++.+.+.+.+++.+++..| +|.|++=
T Consensus 235 --~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik 265 (345)
T 2zad_A 235 --PFPVAADESARTKFDVMRLVKEEAVDYVNIK 265 (345)
T ss_dssp --SSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred --CCCEEEeCCcCCHHHHHHHHHhCCCCEEEEe
Confidence 79999999999999999999877 8999983
No 225
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.33 E-value=0.011 Score=54.62 Aligned_cols=162 Identities=10% Similarity=0.062 Sum_probs=97.5
Q ss_pred HHHHHhhCCCC-eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-
Q 014581 140 FKQLKALYPDK-ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA- 217 (422)
Q Consensus 140 i~~~k~~~~~~-pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~- 217 (422)
++.+++.. +. +|+.-+.-.--+.....+++.+.+. |++.+|.+..+ .+.++..++..++.-
T Consensus 44 v~~L~~~~-~~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~~~G~--------------~~~~~~a~~~~~~~~~ 106 (222)
T 4dbe_A 44 TRELLIGL-DVEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHSFIGV--------------KGSLDELKRYLDANSK 106 (222)
T ss_dssp HHHHHHTC-CCSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEESTTCT--------------TTTHHHHHHHHHHTTC
T ss_pred HHHHHHhc-CCCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEcCcCc--------------HHHHHHHHHHHHhcCC
Confidence 34444422 67 8998886332333433444444343 99988854320 122444454443321
Q ss_pred CccEEEEECC-CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHH
Q 014581 218 TVPVWAKMTP-NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294 (422)
Q Consensus 218 ~iPv~vKl~~-~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~ 294 (422)
.+-+...++. +.. ...++++.+.++|++|+++..+- | .-+..
T Consensus 107 ~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sat~--------------------------------p---~e~~~ 151 (222)
T 4dbe_A 107 NLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGGTK--------------------------------L---DHITQ 151 (222)
T ss_dssp EEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECTTC--------------------------------H---HHHHH
T ss_pred cEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECCCC--------------------------------H---HHHHH
Confidence 2223334442 111 13678999999999999876532 2 12445
Q ss_pred HHHHhhccCCCCCceEEEecCCCCH-HHHHHHHHhCCCEEEEhhHHHhh-hh-HHHHHHHHHHHHHHHH
Q 014581 295 IAKMMKSEFNDKDYSLSGIGGVETG-GDAAEFILLGANTVQVCTGVMMH-GY-GLVKRLCEELKDFMKM 360 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa~GGI~s~-~da~~~l~aGAd~V~vgtall~~-Gp-~~i~~i~~~l~~~m~~ 360 (422)
+++.++ + .++.++||.-. .+..+++.+|||.+.|||++... .| ...+++.++++++..+
T Consensus 152 ir~~~~------~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 152 YRRDFE------K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp HHHHCT------T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCC------C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 677663 5 58889999732 15677788999999999999974 23 4578888888775543
No 226
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=97.33 E-value=0.0013 Score=65.59 Aligned_cols=134 Identities=8% Similarity=0.006 Sum_probs=92.7
Q ss_pred CeEEEEeCC-CCCH---HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEE
Q 014581 150 KILIASIME-EYNK---AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWA 223 (422)
Q Consensus 150 ~pvi~si~~-~~~~---~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~v 223 (422)
.|+.++++. ..++ +++.+.++++.+.|++.++++++++ +++...+++++||+.+ +++|.+
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~d~e~v~avR~a~G~d~~l~v 189 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGT--------------SFKEDVRHINALQHTAGSSITMIL 189 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSS--------------CHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCC--------------CHHHHHHHHHHHHHhhCCCCEEEE
Confidence 356555521 1467 8888888888888999999997642 2355667788888775 789999
Q ss_pred EECCCCC--ChHHHHHHHHHc-CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhh
Q 014581 224 KMTPNIT--DITEPARVALRS-GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300 (422)
Q Consensus 224 Kl~~~~~--~~~~~a~~l~~a-Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~ 300 (422)
.....++ +..++++.+.+. |++.|- +|.+ +..++..+++++.+
T Consensus 190 Dan~~~~~~~a~~~~~~l~~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~- 235 (382)
T 2gdq_A 190 DANQSYDAAAAFKWERYFSEWTNIGWLE----------------EPLP-----------------FDQPQDYAMLRSRL- 235 (382)
T ss_dssp ECTTCCCHHHHHTTHHHHTTCSCEEEEE----------------CCSC-----------------SSCHHHHHHHHTTC-
T ss_pred ECCCCCCHHHHHHHHHHHhhccCCeEEE----------------CCCC-----------------cccHHHHHHHHhhC-
Confidence 9876554 234566667666 655441 1211 11134445566554
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhh
Q 014581 301 SEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCT 337 (422)
Q Consensus 301 ~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgt 337 (422)
++||++.+.+.+.+++.+++..| +|.|++=-
T Consensus 236 ------~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 267 (382)
T 2gdq_A 236 ------SVPVAGGENMKGPAQYVPLLSQRCLDIIQPDV 267 (382)
T ss_dssp ------SSCEEECTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred ------CCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 79999999999999999999876 88998853
No 227
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=97.31 E-value=0.036 Score=53.32 Aligned_cols=162 Identities=16% Similarity=0.185 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++..+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 64 ~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 131 (301)
T 1xky_A 64 SEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHASIDLTKKATEVGVDAVMLV--APYYN---------KPSQEGMYQHFK 131 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444332 2579999996 5677888999999999999998764 34421 124467788888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+.+= | ..|.
T Consensus 132 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 177 (301)
T 1xky_A 132 AIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEI--ENIVAIK--------D--------------AGGD---------- 177 (301)
T ss_dssp HHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEE--------E--------------CSSC----------
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEE--------c--------------CCCC----------
Confidence 88888899999976552 11123444444432 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++++..++ ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++.
T Consensus 178 ~~~~~~~~~~~~~-----~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~ 229 (301)
T 1xky_A 178 VLTMTEIIEKTAD-----DFAVY-SGD---DGLTLPAMAVGAKGIVSVASHVI--GNEMQEMI 229 (301)
T ss_dssp HHHHHHHHHHSCT-----TCEEE-ESS---GGGHHHHHHTTCCEEEESTHHHH--HHHHHHHH
T ss_pred HHHHHHHHHhcCC-----CeEEE-ECc---HHHHHHHHHcCCCEEEcCHHHhC--HHHHHHHH
Confidence 2334455555432 45553 442 23478889999999998887654 45444443
No 228
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=97.30 E-value=0.033 Score=53.98 Aligned_cols=161 Identities=12% Similarity=-0.037 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ ..+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 76 ~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 143 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAKTVRRAQFAESLGAEAVMVL--PISYW---------KLNEAEVFQHYR 143 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 345555455444432 2579999996 5678888999999999999999763 45431 124467788888
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHH-HHcC-CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcch
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVA-LRSG-SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l-~~aG-adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p 286 (422)
.|.+.+++||++--.|.. .-..+...++ .+.. +-||.-+ .+.
T Consensus 144 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKds-------------------------sgd-------- 190 (315)
T 3na8_A 144 AVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKES-------------------------TGD-------- 190 (315)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEEC-------------------------SSC--------
T ss_pred HHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECC-------------------------CCC--------
Confidence 888888999999765521 1123455555 4432 2222111 111
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++.+.+++ ++.|+... -..+..++.+|++++..+++-+. |..+.++.
T Consensus 191 --~~~~~~~~~~~~~-----~f~v~~G~----D~~~l~~l~~G~~G~is~~an~~--P~~~~~l~ 242 (315)
T 3na8_A 191 --IQRMHKLRLLGEG-----RVPFYNGC----NPLALEAFVAGAKGWCSAAPNLI--PTLNGQLY 242 (315)
T ss_dssp --HHHHHHHHHHTTT-----CSCEEECC----GGGHHHHHHHTCSEEEESGGGTC--HHHHHHHH
T ss_pred --HHHHHHHHHHcCC-----CEEEEeCc----hHHHHHHHHCCCCEEEechhhhC--HHHHHHHH
Confidence 2334455555543 56555432 23467888999999998887553 44444443
No 229
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.29 E-value=0.0038 Score=62.74 Aligned_cols=160 Identities=11% Similarity=0.012 Sum_probs=105.2
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCc-------cccccccc--cChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE-------RKMGAAVG--QDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~-------~~~G~~l~--~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+.+++. +.+++++.+.++++.+.|+..+-+.++++..... ..-|..+. ...+...+++++||+.+ +
T Consensus 123 v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 123 IPVYTHAT-SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCC
Confidence 57777664 4678888888888878899999999876421000 00011111 11345567788888876 7
Q ss_pred ccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 219 VPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 219 iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
++|.+..+..++ +..++++.+.+.|++.|. +|.+. .. ++..++++
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE----------------qP~~~-------~~----------~~~~~~l~ 248 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIE----------------DILPP-------NQ----------TEWLDNIR 248 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE----------------CSSCT-------TC----------GGGHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE----------------CCCCh-------hH----------HHHHHHHH
Confidence 899999877664 356777888888877662 22211 11 12234566
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHH
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~ 351 (422)
+.. ++||++.+.+.+.+|+.+++..| +|.||+--.-. .|..-..++.
T Consensus 249 ~~~-------~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~kia 296 (401)
T 3sbf_A 249 SQS-------SVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQI-GGITPALKLG 296 (401)
T ss_dssp TTC-------CCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred hhC-------CCCEEeCCccCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHHH
Confidence 554 79999999999999999999876 78998875543 2344444443
No 230
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.28 E-value=0.0017 Score=65.91 Aligned_cols=154 Identities=12% Similarity=0.032 Sum_probs=102.0
Q ss_pred CeEEEEeCC--CCCH-HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEE
Q 014581 150 KILIASIME--EYNK-AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAK 224 (422)
Q Consensus 150 ~pvi~si~~--~~~~-~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vK 224 (422)
.|+.++ +. ..++ +++.+.++++.+.|++.+++++++ +++...+++++||+.+ +++|.+.
T Consensus 172 vp~~~s-g~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~d~e~v~avR~avG~d~~l~vD 235 (428)
T 3bjs_A 172 IPAYAG-GIALGYQPKESLAEEAQEYIARGYKALKLRIGD---------------AARVDIERVRHVRKVLGDEVDILTD 235 (428)
T ss_dssp EEEEEE-SSCSCSCCHHHHHHHHHHHHHHTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eeeeee-ccccCCChHHHHHHHHHHHHHCCCCEEEECCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 466665 21 2467 888888888888899999998653 2345567788888875 7899998
Q ss_pred ECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 225 MTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 225 l~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
....++ +..++++.+.+.|++.|. +|.+ +..++..+++++.+
T Consensus 236 an~~~~~~eai~~~~~L~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~--- 279 (428)
T 3bjs_A 236 ANTAYTMADARRVLPVLAEIQAGWLE----------------EPFA-----------------CNDFASYREVAKIT--- 279 (428)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSCEE----------------CCSC-----------------TTCHHHHHHHTTTC---
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------ccCHHHHHHHHHhC---
Confidence 776554 356778888888887552 1211 11234444555543
Q ss_pred CCCCC-ceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 303 FNDKD-YSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 303 ~~~~~-ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+ +||++.+.+.+.+++.+++..| +|.|++=-.-. .|..-..++ .++.+++|+.
T Consensus 280 ----~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGitea~~i----a~~A~~~gi~ 334 (428)
T 3bjs_A 280 ----PLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKC-GGITEGIRI----AAMASAYRIP 334 (428)
T ss_dssp ----SSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTS-SCHHHHHHH----HHHHHHTTCC
T ss_pred ----CCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCe
Confidence 6 9999999999999999999877 67887753222 233323333 3344566664
No 231
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=97.27 E-value=0.04 Score=52.81 Aligned_cols=162 Identities=18% Similarity=0.122 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 52 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 119 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEAVHLTAHAKEVGADGALVV--VPYYN---------KPTQRGLYEHFK 119 (294)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5678888999999999999998764 34421 124466778888
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHHH-HcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVAL-RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI 287 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~-~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~ 287 (422)
+|.+++++||++--.|.. .-..+...++. +. ..|+-+= | ..|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgiK--------d--------------s~gd--------- 166 (294)
T 2ehh_A 120 TVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASEC--ENIVASK--------E--------------STPN--------- 166 (294)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEE--------E--------------CCSC---------
T ss_pred HHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhC--CCEEEEE--------e--------------CCCC---------
Confidence 888888999999765521 11234444444 43 2222110 0 0111
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++++..++ ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++.
T Consensus 167 -~~~~~~~~~~~~~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~an~~--P~~~~~l~ 218 (294)
T 2ehh_A 167 -MDRISEIVKRLGE-----SFSVL-SGD---DSLTLPMMALGAKGVISVANNVM--PREVKELI 218 (294)
T ss_dssp -HHHHHHHHHHHCT-----TSEEE-ESS---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHH
T ss_pred -HHHHHHHHHhcCC-----CeEEE-ECc---HHHHHHHHHCCCCEEEeCHHHhh--HHHHHHHH
Confidence 2334455555432 56554 332 23467888999999999887653 44444443
No 232
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.26 E-value=0.024 Score=54.58 Aligned_cols=163 Identities=13% Similarity=0.055 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 56 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 123 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQRRVPVVAGVA-STSVADAVAQAKLYEKLGADGILAI--LEAYF---------PLKDAQIESYFR 123 (300)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHHHHHHHHHHHHTCSEEEEE--ECCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 445555555444432 2469999996 5678888999999999999999763 34421 124466778888
Q ss_pred HHhhccCccEEEEECCCCCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|..+. ..+...++.+. ..|+.+= | ..+.
T Consensus 124 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 169 (300)
T 3eb2_A 124 AIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEH--PRIRYIK--------D--------------ASTN---------- 169 (300)
T ss_dssp HHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTS--TTEEEEE--------E--------------CSSB----------
T ss_pred HHHHHCCCCEEEEECccccCCCCCHHHHHHHHcC--CCEEEEE--------c--------------CCCC----------
Confidence 88888899999988775432 24555555432 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+..++ ++.|+. |.= ..+..++.+|++++..+++-+. |..+.++.+
T Consensus 170 ~~~~~~~~~~~~~-----~f~v~~-G~d---~~~~~~l~~G~~G~is~~an~~--P~~~~~l~~ 222 (300)
T 3eb2_A 170 TGRLLSIINRCGD-----ALQVFS-ASA---HIPAAVMLIGGVGWMAGPACIA--PRQSVALYE 222 (300)
T ss_dssp HHHHHHHHHHHGG-----GSEEEE-CTT---SCHHHHHHTTCCEEEEGGGGTC--HHHHHHHHH
T ss_pred HHHHHHHHHHcCC-----CeEEEe-CcH---HHHHHHHhCCCCEEEeChhhhh--HHHHHHHHH
Confidence 2334455555543 455554 322 2357888999999998887653 444444433
No 233
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=97.26 E-value=0.04 Score=53.03 Aligned_cols=161 Identities=16% Similarity=0.085 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHhhCC--CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHH
Q 014581 133 LETMLKEFKQLKALYP--DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVC 210 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~--~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv 210 (422)
.++..+.++.+.+... ..||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..
T Consensus 59 ~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~s~~~l~~~f 126 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHEAVGLAKFAKEHGADGILSV--APYYN---------KPTQQGLYEHY 126 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEc--CCCCC---------CCCHHHHHHHH
Confidence 4555555555444332 469999996 5678888999999999999999764 45431 12346678888
Q ss_pred HHHhhccCccEEEEECCCC---CChHHHHHHHHHc--CCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 211 GWINAKATVPVWAKMTPNI---TDITEPARVALRS--GSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 211 ~~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~~a--Gadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+.|.+.+++||++--.|.. .-..+...++.+. .+-||.-+ .+.
T Consensus 127 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds-------------------------sgd------- 174 (301)
T 3m5v_A 127 KAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEA-------------------------SGN------- 174 (301)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC-------------------------SSC-------
T ss_pred HHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeC-------------------------CCC-------
Confidence 8888888999999765531 1123344444443 23333211 111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+.+ + ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++.+
T Consensus 175 ---~~~~~~~~~~~-~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~~ 226 (301)
T 3m5v_A 175 ---IDKCVDLLAHE-P-----RMMLI-SGE---DAINYPILSNGGKGVISVTSNLL--PDMISALTH 226 (301)
T ss_dssp ---HHHHHHHHHHC-T-----TSEEE-ECC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHHH
T ss_pred ---HHHHHHHHHhC-C-----CeEEE-Ecc---HHHHHHHHHcCCCEEEehHHHhh--HHHHHHHHH
Confidence 23344455544 2 56554 332 23477889999999998887654 455444443
No 234
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.25 E-value=0.0057 Score=57.20 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=35.1
Q ss_pred HHHHHHHhhccCCCCCceEEEecCCCCHH----------HHHHHHHhCCCEEEEhhHHHhh
Q 014581 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGG----------DAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa~GGI~s~~----------da~~~l~aGAd~V~vgtall~~ 342 (422)
++++++.++ +.+|+..|||..-. .+.+++.+|||.+.+||+++..
T Consensus 173 i~~lr~~~~------~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 227 (245)
T 1eix_A 173 AVRFKQVFG------QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQS 227 (245)
T ss_dssp HHHHHHHHC------SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHhcC------CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCC
Confidence 566777663 45799999997321 4778889999999999999975
No 235
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.25 E-value=0.0015 Score=66.06 Aligned_cols=166 Identities=10% Similarity=0.021 Sum_probs=109.7
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc--------------------ccccChhHHHHH
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA--------------------AVGQDCRLLEEV 209 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~--------------------~l~~~~~~v~~i 209 (422)
.|+.+++. +.+++++.+.++++.+.|+..+-+.+++|.... .+|. ....+.+...++
T Consensus 133 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~--~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~ 209 (418)
T 3r4e_A 133 IMVYGHAN-GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKD--AYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKL 209 (418)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC--------------------CCCCEEEECHHHHHHHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCccccc--cccccccccccccccccccccccccchhHHHHHHHH
Confidence 57777764 467889888888888889999999999864210 0000 000123556678
Q ss_pred HHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 210 CGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 210 v~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+++||+.+ +++|.+..+..++ +..++++.+.+.|++.|. +|.+. ..
T Consensus 210 v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------qP~~~-------~d------- 259 (418)
T 3r4e_A 210 FEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE----------------DCTPA-------EN------- 259 (418)
T ss_dssp HHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE----------------SCSCC-------SS-------
T ss_pred HHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE----------------CCCCc-------cC-------
Confidence 88888876 7899999876654 356778888888888773 12210 11
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++..+++++.. ++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++. .+.+.+|+
T Consensus 260 ---~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~-GGit~~~~ia----~~A~~~gi 323 (418)
T 3r4e_A 260 ---QEAFRLVRQHT-------VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGA-GGLTHLRRIA----DLASLYQV 323 (418)
T ss_dssp ---GGGGHHHHHHC-------CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT-THHHHHHHHH----HHHHHTTC
T ss_pred ---HHHHHHHHhcC-------CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCcccc-CCHHHHHHHH----HHHHHcCC
Confidence 12234566665 79999999999999999999987 78999875443 2343333333 33445555
No 236
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.22 E-value=0.0034 Score=60.72 Aligned_cols=132 Identities=12% Similarity=0.100 Sum_probs=76.0
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC---CCC---C----hHHHHHH
Q 014581 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP---NIT---D----ITEPARV 238 (422)
Q Consensus 169 a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~---~~~---~----~~~~a~~ 238 (422)
++.+.+.|+|++.+-+......+. ....+.+.++.++.++ .++|+++=+-+ .+. + +.+.++.
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~-------~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~ 185 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDA-------QQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKE 185 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCH-------HHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCccH-------HHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHHHHHH
Confidence 345667799999965421111000 1122344444444433 38998876532 121 1 2445777
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce-EEEecCCC
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS-LSGIGGVE 317 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip-IIa~GGI~ 317 (422)
+.+.|+|.+.+.-+..+ .++ .+.+.++.+..... ..+| |+..||+
T Consensus 186 a~~lGaD~iKv~~~~~~--------------------~g~----------~~~~~~vv~~~~~~---~~~P~Vv~aGG~- 231 (304)
T 1to3_A 186 LGDSGADLYKVEMPLYG--------------------KGA----------RSDLLTASQRLNGH---INMPWVILSSGV- 231 (304)
T ss_dssp HTTSSCSEEEECCGGGG--------------------CSC----------HHHHHHHHHHHHHT---CCSCEEECCTTS-
T ss_pred HHHcCCCEEEeCCCcCC--------------------CCC----------HHHHHHHHHhcccc---CCCCeEEEecCC-
Confidence 88899998865532110 011 12233344431110 1689 9999999
Q ss_pred CHH----HHHHHHHhCCCEEEEhhHHHhh
Q 014581 318 TGG----DAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 318 s~~----da~~~l~aGAd~V~vgtall~~ 342 (422)
+.+ .+.+++.+||++|.+||+++..
T Consensus 232 ~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 232 DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 563 4777788999999999999866
No 237
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.22 E-value=0.0022 Score=64.59 Aligned_cols=155 Identities=15% Similarity=0.135 Sum_probs=104.7
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccc-ccChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV-GQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEP 235 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l-~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~ 235 (422)
+++++.+.++.+.+.|+..+-++++++.... .|... ..+++...+++++||+.+ +.+|.+..+..++ +..++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~---~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~ 227 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIY---DGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRL 227 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTT---CSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCccc---ccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHH
Confidence 6788888888877789999999988763210 01110 112455667788888876 6899998776554 34567
Q ss_pred HHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecC
Q 014581 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GG 315 (422)
++.+.+.|++.|. +|.+ |..++..+++++.+ ++||++.+.
T Consensus 228 ~~~l~~~~i~~iE----------------eP~~-----------------~~~~~~~~~l~~~~-------~iPIa~dE~ 267 (404)
T 4e5t_A 228 ARRLEAYDPLWFE----------------EPIP-----------------PEKPEDMAEVARYT-------SIPVATGER 267 (404)
T ss_dssp HHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHC-------SSCEEECTT
T ss_pred HHHHhhcCCcEEE----------------CCCC-----------------cccHHHHHHHHhhC-------CCCEEeCCC
Confidence 8888888887762 1211 11234556677765 799999999
Q ss_pred CCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 316 VETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 316 I~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
+.+.+|+.+++..| +|.||+--.-. .|..-..++. ++.+.+|+
T Consensus 268 ~~~~~~~~~~i~~~a~d~v~~d~~~~-GGit~~~~ia----~~A~~~gi 311 (404)
T 4e5t_A 268 LCTKYEFSRVLETGAASILQMNLGRV-GGLLEAKKIA----AMAECHSA 311 (404)
T ss_dssp CCHHHHHHHHHHHTCCSEECCCTTTS-SCHHHHHHHH----HHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCCEEecCcccc-CCHHHHHHHH----HHHHHcCC
Confidence 99999999999987 78988765443 2344344433 34455665
No 238
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=97.22 E-value=0.038 Score=52.89 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 120 (291)
T 3tak_A 53 MEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREAIELTKAAKDLGADAALLV--TPYYN---------KPTQEGLYQHYK 120 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5678888999999999999998764 34421 123466778888
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|.. .-..+...++.+. ..|+-+= | ..+.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK--------~--------------ssgd---------- 166 (291)
T 3tak_A 121 AIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEI--PNIVGIK--------D--------------ATGD---------- 166 (291)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhcCCCEEEEecccccCCCCCHHHHHHHHcC--CCEEEEE--------e--------------CCCC----------
Confidence 888888999999765431 1123444444332 2222110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~ 353 (422)
+..+.++.+..++ ++.|+ +|. -+.+..++.+|++++..+++-+. |..+.++.+.
T Consensus 167 ~~~~~~~~~~~~~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~~a 220 (291)
T 3tak_A 167 VPRGKALIDALNG-----KMAVY-SGD---DETAWELMLLGADGNISVTANIA--PKAMSEVCAV 220 (291)
T ss_dssp HHHHHHHHHHHTT-----SSEEE-ECC---HHHHHHHHHTTCCEEEESGGGTC--HHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-----CeEEE-ECc---HHHHHHHHHCCCCEEEechhhhc--HHHHHHHHHH
Confidence 2334455555532 56554 332 45577889999999998887654 5555555443
No 239
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.20 E-value=0.0032 Score=63.54 Aligned_cols=166 Identities=12% Similarity=0.083 Sum_probs=110.0
Q ss_pred CeEEEEeCC--------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccc-ccChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIME--------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV-GQDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~--------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l-~~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+.+|+.. ..+++++.+.++.+.+.|+..+-++++++... ..|... ..+++...+++++||+.+ +
T Consensus 125 v~~yas~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~---~~g~~~~~~~~~~d~~~v~avR~a~G~d 201 (412)
T 4e4u_A 125 LRSYTYLYPKNAKGEYDYDDPDLAAECAAENVKLGFTAVKFDPAGPYTA---YSGHQLSLEVLDRCELFCRRVREAVGSK 201 (412)
T ss_dssp EEEEEECCCBCTTSCBCSSCHHHHHHHHHHHHHHTCSEEEECCSCCCBT---TCCBCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEeccCCcccccccCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcc---ccccccchhhHHHHHHHHHHHHHHhCCC
Confidence 477777641 13788888888888778999999998876421 001100 112455567788888876 6
Q ss_pred ccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 219 VPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 219 iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
++|.+..+..++ +..++++.+.+.|++.|. +|.+ +..++..++++
T Consensus 202 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~ 248 (412)
T 4e4u_A 202 ADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFE----------------EPVP-----------------PGQEEAIAQVA 248 (412)
T ss_dssp SEEEECCCSCBCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------SSCHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHhhhcCCcEEE----------------CCCC-----------------hhhHHHHHHHH
Confidence 899998776554 345678888888887663 1221 11234456677
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
+.+ ++||++...+.+.+++.+++..| +|.||+--.-. .|..-..++. .+.+.+|+
T Consensus 249 ~~~-------~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~-GGit~~~kia----~~A~~~gi 304 (412)
T 4e4u_A 249 KHT-------SIPIATGERLTTKYEFHKLLQAGGASILQLNVARV-GGLLEAKKIA----TLAEVHYA 304 (412)
T ss_dssp HTC-------SSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTT-TSHHHHHHHH----HHHHHTTC
T ss_pred hhC-------CCCEEecCccCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHHH----HHHHHcCC
Confidence 665 79999999999999999999987 78998864433 2344344433 34455555
No 240
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=97.20 E-value=0.035 Score=53.82 Aligned_cols=163 Identities=15% Similarity=0.179 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 75 ~~Er~~v~~~~v~~~~grvpViaGvg-~~st~eai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 142 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTREAVALTEAAKSGGADACLLV--TPYYN---------KPTQEGMYQHFR 142 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHHHcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 345545454444332 2479999996 5678888999999999999998764 34431 123466778888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+.+= | ..+.
T Consensus 143 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 188 (314)
T 3qze_A 143 HIAEAVAIPQILYNVPGRTSCDMLPETVERLSKV--PNIIGIK--------E--------------ATGD---------- 188 (314)
T ss_dssp HHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEE--------c--------------CCCC----------
Confidence 88888899999976552 11123444455442 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+..++ ++.|+ +|. -+.+..++.+||+++..+++-+. |..+.++.+
T Consensus 189 ~~~~~~~~~~~~~-----~f~v~-~G~---d~~~l~~l~~Ga~G~is~~an~~--P~~~~~l~~ 241 (314)
T 3qze_A 189 LQRAKEVIERVGK-----DFLVY-SGD---DATAVELMLLGGKGNISVTANVA--PRAMSDLCA 241 (314)
T ss_dssp HHHHHHHHHHSCT-----TSEEE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHHH
T ss_pred HHHHHHHHHHcCC-----CeEEE-ecC---hHHHHHHHHCCCCEEEecHHhhh--HHHHHHHHH
Confidence 2334455555532 56554 332 12378889999999998887654 454444433
No 241
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.20 E-value=0.014 Score=53.26 Aligned_cols=130 Identities=18% Similarity=0.108 Sum_probs=84.9
Q ss_pred eEEEEeC--CC---CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 151 ILIASIM--EE---YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 151 pvi~si~--~~---~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
-+|+|.. .+ .+.+...++++.++++|++++.++ . + +.++.+++.+++|++...
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~-----~-------------~----~~i~~i~~~~~~pv~~~~ 63 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN-----T-------------K----EDILAIKETVDLPVIGIV 63 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE-----S-------------H----HHHHHHHHHCCSCEEEEC
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC-----C-------------H----HHHHHHHHhcCCCEEeee
Confidence 3666654 12 245778899999999999999764 0 1 346667777799985322
Q ss_pred CCCC-------CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 226 TPNI-------TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 226 ~~~~-------~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
..++ ....+.++.+.++|+|.|+++..... .| . ....+.++.+++.
T Consensus 64 ~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~---------~p----------~--------~~~~~~i~~~~~~ 116 (223)
T 1y0e_A 64 KRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ---------RP----------K--------ETLDELVSYIRTH 116 (223)
T ss_dssp BCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC---------CS----------S--------SCHHHHHHHHHHH
T ss_pred ccCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc---------Cc----------c--------cCHHHHHHHHHHh
Confidence 2111 12345677888999999987643210 00 0 0113566777776
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
++ +++++. ++.+.+++.++..+|+|.|+++.
T Consensus 117 ~~------~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 117 AP------NVEIMA--DIATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp CT------TSEEEE--ECSSHHHHHHHHHTTCSEEECTT
T ss_pred CC------CceEEe--cCCCHHHHHHHHHcCCCEEEeCC
Confidence 53 455554 67899999999999999998754
No 242
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=97.19 E-value=0.026 Score=54.31 Aligned_cols=143 Identities=14% Similarity=0.135 Sum_probs=88.2
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++.+ +.+|+.-+...--+......++.+.++|+|++.+|... ..+.++..++..++.-+.
T Consensus 68 V~~Lk~~~-g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~~---------------G~~~m~aa~e~a~~~~~~ 131 (303)
T 3ru6_A 68 IEELKKVD-DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASA---------------GKIAIQEVMTRLSKFSKR 131 (303)
T ss_dssp HHHHHHHC-CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG---------------CHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHhh-CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEeccC---------------CHHHHHHHHHHHHhcCCC
Confidence 44555544 67888877533334444556677778899999998431 124466666666554334
Q ss_pred cEEEE---EC-CCC--------CC----hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCC
Q 014581 220 PVWAK---MT-PNI--------TD----ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283 (422)
Q Consensus 220 Pv~vK---l~-~~~--------~~----~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~ 283 (422)
|.++= ++ .+- .+ +.++|+.+.++|++|++++..
T Consensus 132 ~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~------------------------------- 180 (303)
T 3ru6_A 132 PLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF------------------------------- 180 (303)
T ss_dssp CEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT-------------------------------
T ss_pred ceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH-------------------------------
Confidence 54332 12 110 01 234677788899999875321
Q ss_pred cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHH----------HHHHHHHhCCCEEEEhhHHHhh
Q 014581 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG----------DAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 284 i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~----------da~~~l~aGAd~V~vgtall~~ 342 (422)
+ +..+++.++ +-.++.++||.-.. .+.+++.+|||.+.+||+++..
T Consensus 181 ------E-~~~IR~~~~------~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 181 ------E-SKKIKEHTS------SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp ------T-HHHHHHHSC------TTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred ------H-HHHHHHhCC------CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 0 234666664 33488899997221 4667788999999999999874
No 243
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=97.18 E-value=0.037 Score=53.16 Aligned_cols=163 Identities=14% Similarity=0.141 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 59 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 126 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEAIALSQAAEKAGADYTLSV--VPYYN---------KPSQEGIYQHFK 126 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHHHcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444332 2579999996 5678888999999999999998764 34421 123466778888
Q ss_pred HHhhccCccEEEEECCCCC---ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNIT---DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~---~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+++++||++--.|..+ -..+...++.+. ..|+-+= | ..+.
T Consensus 127 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK--------d--------------ssgd---------- 172 (297)
T 3flu_A 127 TIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEI--PNIVGVK--------E--------------ASGN---------- 172 (297)
T ss_dssp HHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhCCCCEEEEECCchhccCCCHHHHHHHHcC--CCEEEEE--------e--------------CCCC----------
Confidence 8888889999997654311 123444444432 2222110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+..++ ++.|+ +| +-+.+..++.+||+++..+++-+. |..+.++.+
T Consensus 173 ~~~~~~~~~~~~~-----~f~v~-~G---~d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~~ 225 (297)
T 3flu_A 173 IGSNIELINRAPE-----GFVVL-SG---DDHTALPFMLCGGHGVITVAANAA--PKLFADMCR 225 (297)
T ss_dssp HHHHHHHHHHSCT-----TCEEE-EC---CGGGHHHHHHTTCCEEEESGGGTC--HHHHHHHHH
T ss_pred HHHHHHHHHhcCC-----CeEEE-EC---cHHHHHHHHhCCCCEEEechHhhh--HHHHHHHHH
Confidence 2334455555532 56554 33 223477889999999998887654 555555443
No 244
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=97.17 E-value=0.0069 Score=57.05 Aligned_cols=201 Identities=13% Similarity=0.159 Sum_probs=120.3
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+... .++-..+.+.++||-++-+++.+. ....|+++.+.+ ++++++
T Consensus 20 ~~i~~~~a---yD~~sA~~~~~aG~dai~vg~~s~------------------------a~~~G~pD~~~v---t~~em~ 69 (255)
T 2qiw_A 20 KLLVLPTV---WDTWSAGLVEEAGFSGLTIGSHPV------------------------ADATGSSDGENM---NFADYM 69 (255)
T ss_dssp CCEECCEE---SSHHHHHHHHHTTCSCEEECHHHH------------------------HHHTTCCTTTCS---CHHHHH
T ss_pred CcEEEecC---cCHHHHHHHHHcCCCEEEEChHHH------------------------HHhCCCCCCCCc---CHHHHH
Confidence 35554332 357777777889998888775322 112344444433 388999
Q ss_pred HHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc
Q 014581 138 KEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~ 217 (422)
...+.+.+.. +.||++-+-.+|.... .+.++++.++|+++|.|.=.. +. -|..+ .+.+...+.++++++..
T Consensus 70 ~~~~~I~r~~-~~pviaD~~~Gyg~~~-~~~~~~l~~aGa~gv~iEd~~-~~-----~~k~l-~~~~e~~~~I~a~~~a~ 140 (255)
T 2qiw_A 70 AVVKKITSAV-SIPVSVDVESGYGLSP-ADLIAQILEAGAVGINVEDVV-HS-----EGKRV-REAQEHADYIAAARQAA 140 (255)
T ss_dssp HHHHHHHHHC-SSCEEEECTTCTTCCH-HHHHHHHHHTTCCEEEECSEE-GG-----GTTEE-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCCEEeccCCCcCcHH-HHHHHHHHHcCCcEEEECCCC-CC-----CCCcc-cCHHHHHHHHHHHHHHH
Confidence 8888888765 6899998865653222 777888888999999886321 10 01111 23344445555554442
Q ss_pred ---Ccc--EEEEECCC----------CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 218 ---TVP--VWAKMTPN----------ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 218 ---~iP--v~vKl~~~----------~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
++| |..+.-.. ..+..+-++++.++|||.|.+... .
T Consensus 141 ~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~-~---------------------------- 191 (255)
T 2qiw_A 141 DVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL-S---------------------------- 191 (255)
T ss_dssp HHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC-C----------------------------
T ss_pred HhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC-C----------------------------
Confidence 577 55554321 123455677889999999976531 0
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEe--cCCCCH-HHHHHHHHhCCCEEEEhhH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGI--GGVETG-GDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~--GGI~s~-~da~~~l~aGAd~V~vgta 338 (422)
+.+.++++.+.+ ++|+-.. .|-.++ -++.++-.+|...|..+..
T Consensus 192 -----~~~~~~~i~~~~-------~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 192 -----TAEQVERLVDAV-------SVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp -----SHHHHHHHHTTC-------SSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred -----CHHHHHHHHHhC-------CCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 123455566655 4565544 332111 3456777899999999987
No 245
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=97.17 E-value=0.035 Score=52.60 Aligned_cols=145 Identities=13% Similarity=0.133 Sum_probs=92.7
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+-.. .++...+.+.++|+-++-++.-.. ...+|+++.+.+ ++++++
T Consensus 29 ~~i~m~ta---yDa~sA~l~e~aG~d~ilvGdSl~------------------------~~~lG~~dt~~v---tldem~ 78 (275)
T 3vav_A 29 EKIAMLTC---YDASFAALLDRANVDVQLIGDSLG------------------------NVLQGQTTTLPV---TLDDIA 78 (275)
T ss_dssp CCEEEEEC---CSHHHHHHHHHTTCSEEEECTTHH------------------------HHTTCCSSSTTC---CHHHHH
T ss_pred CcEEEEeC---cCHHHHHHHHHcCCCEEEECcHHH------------------------HHHcCCCCCCcc---CHHHHH
Confidence 46654433 457777778889999887662110 123455544432 389999
Q ss_pred HHHHHHHhhCCCCeEEEEeCCC-C-CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh
Q 014581 138 KEFKQLKALYPDKILIASIMEE-Y-NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~~-~-~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
...+.+.+..++.||++-+-.+ | ++++..+.+.++.++|+++|-|-=+ ....+.++++++
T Consensus 79 ~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg------------------~~~~~~i~~l~~ 140 (275)
T 3vav_A 79 YHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGG------------------EWLAETVRFLVE 140 (275)
T ss_dssp HHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECC------------------GGGHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCc------------------hhHHHHHHHHHH
Confidence 8888888766567899988643 3 6778788888887789999976521 112344455544
Q ss_pred ccCccEEEEE--CCC-------C-----C-----ChHHHHHHHHHcCCCEEEEec
Q 014581 216 KATVPVWAKM--TPN-------I-----T-----DITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 216 ~~~iPv~vKl--~~~-------~-----~-----~~~~~a~~l~~aGadgi~v~n 251 (422)
. .+|++--+ .|. + + ++.+-|++++++||++|++-.
T Consensus 141 ~-GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~ 194 (275)
T 3vav_A 141 R-AVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEA 194 (275)
T ss_dssp T-TCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred C-CCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 3 78887432 221 1 1 245667788999999997653
No 246
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=97.15 E-value=0.033 Score=53.42 Aligned_cols=202 Identities=20% Similarity=0.201 Sum_probs=115.8
Q ss_pred ceEeCCeecCC--CceecCCCCC-CCHHH----HHHHHH----cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581 48 SITVNGLQMPN--PFVIGSGPPG-TNYTV----MKRAFD----EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK 116 (422)
Q Consensus 48 ~~~~~Gl~l~n--Pi~~AAg~~~-~~~~~----~~~~~~----~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~ 116 (422)
.+++.++.+-+ |+.+=+||-+ .+.+. .+++.+ .+.+ ++.|..+.++ ||-.
T Consensus 28 ~v~~~~i~~G~~~~l~vIaGPCsies~e~~~~~A~~lk~~~~~~~~~-~v~k~~f~Ka-------pRTs----------- 88 (298)
T 3fs2_A 28 TVKVGNVTFSNSAPLALIAGPCQMETRDHAFEMAGRLKEMTDKLGIG-LVYKSSFDKA-------NRTS----------- 88 (298)
T ss_dssp SEEETTEEECTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCC-EEEECBCCCC-------C--------------
T ss_pred eEEECCEEECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCc-EEEEcccccC-------CCCC-----------
Confidence 67788888874 7777777765 34433 233332 3566 4556554432 2211
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccc
Q 014581 117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMG 196 (422)
Q Consensus 117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G 196 (422)
. .+|+.++ +++-++.+++++++. +.|++-.+. +++.. +.+.+. +|.+.|--.
T Consensus 89 ~--~sf~Glg------~~~GL~~L~~~~~e~-GLpv~Tev~---D~~~v----~~l~~~-vd~lkIgA~----------- 140 (298)
T 3fs2_A 89 L--KAARGIG------LEKALEVFSDLKKEY-GFPVLTDIH---TEEQC----AAVAPV-VDVLQIPAF----------- 140 (298)
T ss_dssp --------CC------HHHHHHHHHHHHHHH-CCCEEEECC---SHHHH----HHHTTT-CSEEEECGG-----------
T ss_pred C--CCcCCcC------HHHHHHHHHHHHHhc-CCeEEEEeC---CHHHH----HHHHhh-CCEEEECcc-----------
Confidence 1 1233333 567777788877665 889998886 45442 344454 899987521
Q ss_pred cccccChhHHHHHHHHHhhccCccEEEEECC--CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCC
Q 014581 197 AAVGQDCRLLEEVCGWINAKATVPVWAKMTP--NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274 (422)
Q Consensus 197 ~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~ 274 (422)
..++.+.++++- .+++||++|-.. +..++...++.+.+.|-+-|++.-+... +
T Consensus 141 --~~~n~~LLr~va-----~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~---y--------------- 195 (298)
T 3fs2_A 141 --LCRQTDLLIAAA-----RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVS---F--------------- 195 (298)
T ss_dssp --GTTCHHHHHHHH-----HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEE---C---------------
T ss_pred --ccCCHHHHHHHH-----ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC---C---------------
Confidence 123445444432 249999999764 3446778888888999888877755421 0
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEe---------------cCCCC--HHHHHHHHHhCCCEEEE
Q 014581 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGI---------------GGVET--GGDAAEFILLGANTVQV 335 (422)
Q Consensus 275 ~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~---------------GGI~s--~~da~~~l~aGAd~V~v 335 (422)
++.- .-..++.+..+++ + ++||+.. ||.+. ..-++.++++|||++.|
T Consensus 196 ---~~~~---~~vdl~~i~~lk~-~-------~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~I 259 (298)
T 3fs2_A 196 ---GYNT---LVSDMRALPIMAG-L-------GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFI 259 (298)
T ss_dssp ---SSSC---EECCTTHHHHHHT-T-------TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEE
T ss_pred ---CCCC---CccCHHHHHHHHH-c-------CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEE
Confidence 0000 0012345666666 5 7899883 33222 23466788999996666
No 247
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=97.14 E-value=0.023 Score=53.61 Aligned_cols=145 Identities=17% Similarity=0.210 Sum_probs=89.6
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+-.. .++-..+.+.++|+-++-++. +. + ....|+++.+.+ ++++++
T Consensus 17 ~~i~~~ta---yD~~sA~l~e~aG~d~ilvGd-sl-----~------------------~~~lG~~dt~~v---tldemi 66 (264)
T 1m3u_A 17 KRFATITA---YDYSFAKLFADEGLNVMLVGD-SL-----G------------------MTVQGHDSTLPV---TVADIA 66 (264)
T ss_dssp CCEEEEEC---CSHHHHHHHHHHTCCEEEECT-TH-----H------------------HHTTCCSSSTTC---CHHHHH
T ss_pred CcEEEEeC---cCHHHHHHHHHcCCCEEEECH-HH-----H------------------HHHcCCCCCCCc---CHHHHH
Confidence 35554333 457777778889999887752 11 0 112455544433 388988
Q ss_pred HHHHHHHhhCCCCeEEEEeCC-CC-CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh
Q 014581 138 KEFKQLKALYPDKILIASIME-EY-NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~-~~-~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
...+.+.+..+..+|++-+.. ++ ++++..+.+.++.++|+++|-|-=+ +...+.++++.+
T Consensus 67 ~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa~aVklEgg------------------~e~~~~I~al~~ 128 (264)
T 1m3u_A 67 YHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGG------------------EWLVETVQMLTE 128 (264)
T ss_dssp HHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTTCSEEECCCS------------------GGGHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEECCc------------------HHHHHHHHHHHH
Confidence 888888776544466666543 23 6777778788888899999976411 123344455544
Q ss_pred ccCccEEE--EECCC-------C-----C-----ChHHHHHHHHHcCCCEEEEec
Q 014581 216 KATVPVWA--KMTPN-------I-----T-----DITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 216 ~~~iPv~v--Kl~~~-------~-----~-----~~~~~a~~l~~aGadgi~v~n 251 (422)
. .+||+- -|+|. + + +..+-|++++++||++|++-.
T Consensus 129 a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (264)
T 1m3u_A 129 R-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLEC 182 (264)
T ss_dssp T-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred C-CCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 4 799882 22221 1 1 234567788999999997654
No 248
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=97.14 E-value=0.0056 Score=61.95 Aligned_cols=160 Identities=11% Similarity=0.028 Sum_probs=105.6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC------Ccc-ccccccc--cChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM------PER-KMGAAVG--QDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~------~~~-~~G~~l~--~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+..++. +.+++++.+.++.+.+.|+..+-+.++.+... +.. .-|..+. ...+...+++++||+.+ +
T Consensus 144 v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 144 IPAYSHAS-GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEeC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 56776664 46788888888888788999999998764210 000 0011110 11345567788888875 7
Q ss_pred ccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 219 VPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 219 iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
++|.+..+..++ +..++++.+.+.|++.|. +|.+ |..++..++++
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~ 269 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIE----------------DILP-----------------PQQSAWLEQVR 269 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------GGGGGGHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE----------------CCCC-----------------hhhHHHHHHHH
Confidence 899999877664 356777888888887662 1221 11122344577
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHH
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~ 351 (422)
+.. ++||++.+.+.+.+|+.+++..| +|.||+--.-. .|..-..++.
T Consensus 270 ~~~-------~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~-GGit~~~kia 317 (422)
T 3tji_A 270 QQS-------CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQI-GGITPALKLA 317 (422)
T ss_dssp HHC-------CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred hhC-------CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHHH
Confidence 665 79999999999999999999976 78999865543 3344444443
No 249
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=97.13 E-value=0.0039 Score=63.38 Aligned_cols=146 Identities=10% Similarity=0.064 Sum_probs=98.0
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEP 235 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~ 235 (422)
.+++++.+.++++.+.|++.++|++++ +++...+++++||+.+ +++|.+.....++ +..++
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~ 261 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA---------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDW 261 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 478889888888888999999998752 2344567778888865 6899998766553 24556
Q ss_pred HHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecC
Q 014581 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GG 315 (422)
++.+.+.|++.|. +|.+ +..++..+++++.+. ++||++.+.
T Consensus 262 ~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~~------~iPIa~dE~ 302 (441)
T 2hxt_A 262 MRQLAEFDIAWIE----------------EPTS-----------------PDDVLGHAAIRQGIT------PVPVSTGEH 302 (441)
T ss_dssp HHTTGGGCCSCEE----------------CCSC-----------------TTCHHHHHHHHHHHT------TSCEEECTT
T ss_pred HHHHHhcCCCeee----------------CCCC-----------------HHHHHHHHHHHhhCC------CCCEEEeCC
Confidence 6666677766441 1211 112344556777652 499999999
Q ss_pred CCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 316 VETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 316 I~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+.+.+++.+++..| +|.|++--.-. .|..-..++ ..+.+++|+.
T Consensus 303 ~~~~~~~~~~i~~~~~d~v~ik~~~~-GGite~~~i----a~~A~~~g~~ 347 (441)
T 2hxt_A 303 TQNRVVFKQLLQAGAVDLIQIDAARV-GGVNENLAI----LLLAAKFGVR 347 (441)
T ss_dssp CCSHHHHHHHHHHTCCSEECCCTTTS-SHHHHHHHH----HHHHHHTTCE
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccee-CCHHHHHHH----HHHHHHcCCe
Confidence 99999999999877 78998853322 223222222 3455666664
No 250
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.11 E-value=0.019 Score=56.43 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=67.4
Q ss_pred HHHHHHHHHhhCC-CCeEEEEeCC------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHH
Q 014581 136 MLKEFKQLKALYP-DKILIASIME------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208 (422)
Q Consensus 136 ~l~~i~~~k~~~~-~~pvi~si~~------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~ 208 (422)
.++.++.+++..+ +.||++-+.. +.+.+++.+++++++++|+|+|++..+.-....... ..+..-.+
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~------~~~~~~~~ 278 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIP------LAPGFQVP 278 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCC------CCTTTTHH
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccC------CCccccHH
Confidence 4555667776654 6799997753 457889999999999999999998742111100000 01111234
Q ss_pred HHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 209 iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
.++.+|+.+++||++ ...+.+ .+.++.+.+.| +|.|.+.
T Consensus 279 ~~~~ir~~~~iPVi~--~Ggi~t-~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 279 FADAVRKRVGLRTGA--VGLITT-PEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHHHCCEEEE--CSSCCC-HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHcCceEEE--ECCCCC-HHHHHHHHHCCCceEEEec
Confidence 566677767899986 344444 45677777787 8977543
No 251
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=97.07 E-value=0.038 Score=53.13 Aligned_cols=161 Identities=11% Similarity=0.050 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++..+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 52 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 119 (297)
T 2rfg_A 52 EEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEAVRYAQHAQQAGADAVLCV--AGYYN---------RPSQEGLYQHFK 119 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHHHTCSEEEEC--CCTTT---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2479999996 5677888999999999999999764 34421 124467778888
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|.. .-..+...++.+. ..|+-+= | ..|.+
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------s~gd~--------- 166 (297)
T 2rfg_A 120 MVHDAIDIPIIVYNIPPRAVVDIKPETMARLAAL--PRIVGVK--------D--------------ATTDL--------- 166 (297)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEE--------E--------------CSCCT---------
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEE--------e--------------CCCCH---------
Confidence 888888999999765521 1123444444442 2232110 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i 350 (422)
..+.++++..++ ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++
T Consensus 167 -~~~~~~~~~~~~-----~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~--P~~~~~l 216 (297)
T 2rfg_A 167 -ARISRERMLINK-----PFSFL-SGD---DMTAIAYNASGGQGCISVSANIA--PALYGQM 216 (297)
T ss_dssp -THHHHHHTTCCS-----CCEEE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHH
T ss_pred -HHHHHHHHhcCC-----CEEEE-eCc---HHHHHHHHHCCCCEEEecHHHhh--HHHHHHH
Confidence 123344444322 45543 332 23467888999999998887653 4444444
No 252
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.00064 Score=64.40 Aligned_cols=84 Identities=18% Similarity=0.131 Sum_probs=66.8
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.++.++|+.+.+.|++.+.+.. ++. ..++.|+++.+.+ .+|
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvD---------L~~-----------------------~n~~~i~~i~~~~-------~~p 78 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIK---------LGP-----------------------NNDDAAREALQES-------PQF 78 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEE---------ESS-----------------------SCHHHHHHHHHHS-------TTT
T ss_pred CCHHHHHHHHHHcCCCEEEEEe---------CCC-----------------------CCHHHHHHHHhcC-------Cce
Confidence 4789999999999999887653 110 0135677777765 789
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-h---hHHHHHHHHHH
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMH-G---YGLVKRLCEEL 354 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vgtall~~-G---p~~i~~i~~~l 354 (422)
|...|||++- |+.+++ +||+-|.++|+++.+ | |.+++++.+.+
T Consensus 79 v~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 79 LQVGGGINDT-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELC 125 (260)
T ss_dssp SEEESSCCTT-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHH
T ss_pred EEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHh
Confidence 9999999986 999999 999999999999977 3 77777776664
No 253
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.07 E-value=0.0081 Score=59.26 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=105.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+.+++. ..+++++.+.++.+.+.|+..+-+++++ +++.-.+.+++||+.+ ++++.+..+.
T Consensus 130 v~~~~~~~-~~~~~~~~~~a~~~~~~G~~~~K~K~G~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 193 (356)
T 3ro6_B 130 LPTSVTIG-IKPVEETLAEAREHLALGFRVLKVKLCG---------------DEEQDFERLRRLHETLAGRAVVRVDPNQ 193 (356)
T ss_dssp EEBCEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred eeeeEEEc-CCCHHHHHHHHHHHHHcCCCEEEEEeCC---------------CHHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35666775 4578888888888777899999999764 2334455677777765 7899999877
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 194 ~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------ 234 (356)
T 3ro6_B 194 SYDRDGLLRLDRLVQELGIEFIE----------------QPFP-----------------AGRTDWLRALPKAI------ 234 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCEE----------------CCSC-----------------TTCHHHHHTSCHHH------
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------CCcHHHHHHHHhcC------
Confidence 665 345678888888877662 2221 11134445566655
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC--CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG--ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG--Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+.+|+.+++..| +|.||+--.-. .|..-..++. .+.+++|+.
T Consensus 235 -~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~----~~a~~~gi~ 289 (356)
T 3ro6_B 235 -RRRIAADESLLGPADAFALAAPPAACGIFNIKLMKC-GGLAPARRIA----TIAETAGID 289 (356)
T ss_dssp -HHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHH-CSHHHHHHHH----HHHHHHTCE
T ss_pred -CCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEccccc-CCHHHHHHHH----HHHHHcCCE
Confidence 69999999999999999999875 99999876544 2344333333 344555653
No 254
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=97.07 E-value=0.091 Score=51.28 Aligned_cols=166 Identities=13% Similarity=0.059 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++..+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 86 ~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~la~~A~~~Gadavlv~--~P~Y~---------~~s~~~l~~~f~ 153 (332)
T 2r8w_A 86 REERRRAIEAAATILRGRRTLMAGIG-ALRTDEAVALAKDAEAAGADALLLA--PVSYT---------PLTQEEAYHHFA 153 (332)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHHHHHHHHHHHHTCSEEEEC--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5677888999999999999999654 34421 124466778888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+-+= | ..|.. ...
T Consensus 154 ~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~--pnIvgiK--------d--------------ssgd~------~~~ 203 (332)
T 2r8w_A 154 AVAGATALPLAIYNNPTTTRFTFSDELLVRLAYI--PNIRAIK--------M--------------PLPAD------ADY 203 (332)
T ss_dssp HHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTS--TTEEEEE--------E--------------CCCTT------CCH
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEEE--------e--------------CCCCc------hhH
Confidence 88888899999875442 11123444455442 2232110 0 01110 001
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++++..++ ++.|+ +| +-..+..++.+|++++..+++-+. |..+.++.
T Consensus 204 ~~~~~~l~~~~~~-----~f~v~-~G---~D~~~l~~l~~G~~G~is~~anv~--P~~~~~l~ 255 (332)
T 2r8w_A 204 AGELARLRPKLSD-----DFAIG-YS---GDWGCTDATLAGGDTWYSVVAGLL--PVPALQLM 255 (332)
T ss_dssp HHHHHHHTTTSCT-----TCEEE-EC---CHHHHHHHHHTTCSEEEESGGGTC--HHHHHHHH
T ss_pred HHHHHHHHHhcCC-----CEEEE-eC---chHHHHHHHHCCCCEEEeCHHHhC--HHHHHHHH
Confidence 2334444443321 45444 44 245678888999999998877653 45444443
No 255
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=97.06 E-value=0.035 Score=53.11 Aligned_cols=162 Identities=14% Similarity=0.141 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 120 (291)
T 3a5f_A 53 ETERKETIKFVIDKVNKRIPVIAGTG-SNNTAASIAMSKWAESIGVDGLLVI--TPYYN---------KTTQKGLVKHFK 120 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 445555555444432 2579999996 5677888999999999999998764 34421 124466777888
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|.. .-..+...++.+. ..|+.+= | ..|.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK--------~--------------s~gd---------- 166 (291)
T 3a5f_A 121 AVSDAVSTPIIIYNVPGRTGLNITPGTLKELCED--KNIVAVX--------E--------------ASGN---------- 166 (291)
T ss_dssp CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEe--------C--------------CCCC----------
Confidence 888888999999765521 1123444444332 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++++..++ ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++.
T Consensus 167 ~~~~~~~~~~~~~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~an~~--P~~~~~l~ 218 (291)
T 3a5f_A 167 ISQIAQIKALCGD-----KLDIY-SGN---DDQIIPILALGGIGVISVLANVI--PEDVHNMC 218 (291)
T ss_dssp HHHHHHHHHHHGG-----GSEEE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHH
T ss_pred HHHHHHHHHhcCC-----CeEEE-eCc---HHHHHHHHHCCCCEEEecHHHhc--HHHHHHHH
Confidence 2334455555443 45553 442 23467888999999999887653 45544443
No 256
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.06 E-value=0.021 Score=56.44 Aligned_cols=154 Identities=13% Similarity=0.090 Sum_probs=102.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++. ..+++++.+.++.+.+. |+..+-+.++... . +.-.+.+++||+.+ +.+|.+..+
T Consensus 129 v~~~~~~~-~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~-----------~---~~d~~~v~avR~a~g~~~~l~vDan 193 (367)
T 3dg3_A 129 MRVSHMLG-FDDPVKMVAEAERIRETYGINTFKVKVGRRP-----------V---QLDTAVVRALRERFGDAIELYVDGN 193 (367)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHHHHHHHCCCEEEEECCCSS-----------T---HHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEEec-CCCHHHHHHHHHHHHHhcCccEEEEeeCCCh-----------h---hhHHHHHHHHHHHhCCCCEEEEECC
Confidence 45666774 34788888888877777 9999999875311 0 12335667777765 688999877
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 194 ~~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~----- 235 (367)
T 3dg3_A 194 RGWSAAESLRAMREMADLDLLFAE----------------ELCP-----------------ADDVLSRRRLVGQL----- 235 (367)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSCEE----------------SCSC-----------------TTSHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEE----------------CCCC-----------------cccHHHHHHHHHhC-----
Confidence 6654 234566777777766552 2221 11234455677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.||+=-.-. |..-..++. .+.+++|+.
T Consensus 236 --~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~--Git~~~~ia----~~A~~~gi~ 288 (367)
T 3dg3_A 236 --DMPFIADESVPTPADVTREVLGGSATAISIKTART--GFTGSTRVH----HLAEGLGLD 288 (367)
T ss_dssp --SSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH--TTHHHHHHH----HHHHHHTCE
T ss_pred --CCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh--hHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999987 79999975554 554444443 344555553
No 257
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=97.05 E-value=0.0016 Score=62.73 Aligned_cols=129 Identities=17% Similarity=0.068 Sum_probs=78.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE--ccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEV--NFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iEl--N~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
.-++..+. ++ +.|+..+++|||.|-+ |++|.... ..|.....+++. ++++++.+++||++|...
T Consensus 22 ggv~~d~~---~~----e~A~~ye~~GA~~lsvLe~~~~Di~~---~~g~~R~~~~~~----i~~i~~~v~iPvl~k~~i 87 (297)
T 4adt_A 22 GGVIMDVK---NV----EQAKIAEKAGAIGVMILENIPSELRN---TDGVARSVDPLK----IEEIRKCISINVLAKVRI 87 (297)
T ss_dssp TCEEEEES---SH----HHHHHHHHHTCSEEEECCCCC--------CCCCCCCCCHHH----HHHHHTTCCSEEEEEEET
T ss_pred CCcccCCC---cH----HHHHHHHHcCCCEEEEecCCCCcchh---cCCcccCCCHHH----HHHHHHhcCCCEEEeccC
Confidence 34666664 23 4578888899998654 56665531 111133345554 455667779999999866
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
++ ...++.++++|||.| +.... . ++ ..+ +..+++.. .+
T Consensus 88 ~~---ide~qil~aaGAD~I---d~s~~---~-----~~----------~~l------------i~~i~~~~------~g 125 (297)
T 4adt_A 88 GH---FVEAQILEELKVDML---DESEV---L-----TM----------ADE------------YNHINKHK------FK 125 (297)
T ss_dssp TC---HHHHHHHHHTTCSEE---EEETT---S-----CC----------SCS------------SCCCCGGG------CS
T ss_pred Cc---HHHHHHHHHcCCCEE---EcCCC---C-----CH----------HHH------------HHHHHhcC------CC
Confidence 53 567888889999998 22110 0 00 000 01112211 15
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 308 YSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
+++++ ++++.+++.+++.+||+.|.+.
T Consensus 126 ~~vvv--~v~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 126 TPFVC--GCTNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp SCEEE--EESSHHHHHHHHHHTCSEEEEC
T ss_pred CeEEE--EeCCHHHHHHHHhCCCCEEEEC
Confidence 66665 6999999999999999999876
No 258
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=97.05 E-value=0.086 Score=50.74 Aligned_cols=162 Identities=19% Similarity=0.109 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 63 ~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 130 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAESQQLAASAKRYGFDAVSAV--TPFYY---------PFSFEEHCDHYR 130 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHhCCCCEEEec--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5677888999999999999998764 34421 124466778888
Q ss_pred HHhhccC-ccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh
Q 014581 212 WINAKAT-VPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI 287 (422)
Q Consensus 212 ~vr~~~~-iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~ 287 (422)
.|.+.++ +||++--.|. +.-..+...++.+. ..|+-+= | ..|.
T Consensus 131 ~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------~--------------s~gd--------- 177 (303)
T 2wkj_A 131 AIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTL--PGVGALX--------Q--------------TSGD--------- 177 (303)
T ss_dssp HHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEEE--------E--------------CCCC---------
T ss_pred HHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEe--------C--------------CCCC---------
Confidence 8888888 9999976442 11123444444432 2232110 0 0111
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++++.. . ++.|+. |. -+.+..++.+|++++..+++-+. |..+.++.+
T Consensus 178 -~~~~~~~~~~~-~-----~f~v~~-G~---d~~~~~~l~~G~~G~is~~an~~--P~~~~~l~~ 229 (303)
T 2wkj_A 178 -LYQMEQIRREH-P-----DLVLYN-GY---DNIFASGLLAGADGGIGSTYNIM--GWRYQGIVK 229 (303)
T ss_dssp -HHHHHHHHHHC-T-----TCEEEE-CC---GGGHHHHHHHTCCEEEETTHHHH--HHHHHHHHH
T ss_pred -HHHHHHHHHhC-C-----CeEEEe-Cc---HHHHHHHHHCCCCEEEeCHHHhC--HHHHHHHHH
Confidence 12333444432 1 555543 32 23478889999999999887654 555444443
No 259
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.04 E-value=0.038 Score=52.58 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=119.4
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
+.+++--+. .+.+.+..+.+.|+.-|++-+-. ..|+.+| +.+
T Consensus 38 ~~~~lEvc~--~s~~~a~~A~~gGAdRIELc~~l----~~GGlTP---------------------S~g----------- 79 (287)
T 3iwp_A 38 NGFLMEVCV--DSVESAVNAERGGADRIELCSGL----SEGGTTP---------------------SMG----------- 79 (287)
T ss_dssp CCSEEEEEE--SSHHHHHHHHHHTCSEEEECBCG----GGTCBCC---------------------CHH-----------
T ss_pred CCceEEEEe--CCHHHHHHHHHhCCCEEEECCCC----CCCCCCC---------------------CHH-----------
Confidence 334444334 46888888889999988875311 1122111 111
Q ss_pred HHHHHHHhhCCCCeEEEEeCC-----CCCHHHHHHH---HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHH
Q 014581 138 KEFKQLKALYPDKILIASIME-----EYNKAAWEEL---IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEV 209 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~-----~~~~~~~~~~---a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~i 209 (422)
.++.+++.. +.||.+=|.. .|+.+++..+ ++.+.++|+|+|.+.+..|.. .-|.+.++++
T Consensus 80 -~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg----------~iD~~~~~~L 147 (287)
T 3iwp_A 80 -VLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG----------HIDKELCMSL 147 (287)
T ss_dssp -HHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS----------CBCHHHHHHH
T ss_pred -HHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC----------CcCHHHHHHH
Confidence 234444433 6888877742 2676666544 556677899999988765553 1356777777
Q ss_pred HHHHhhccCccEEEEECCC-CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 210 CGWINAKATVPVWAKMTPN-ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 210 v~~vr~~~~iPv~vKl~~~-~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
++..+ ..++..=-.-+ ..+..+..+.+.+.|++.|..++.... . +..
T Consensus 148 i~~a~---~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~-------------------a----------~~G 195 (287)
T 3iwp_A 148 MAICR---PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSS-------------------A----------LEG 195 (287)
T ss_dssp HHHHT---TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSS-------------------T----------TTT
T ss_pred HHHcC---CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-------------------h----------HHh
Confidence 77643 35554421111 124667778888899999866553111 0 112
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHH-hCCCEEEEhh
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL-LGANTVQVCT 337 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~-aGAd~V~vgt 337 (422)
++.++++.+...+ +++|++.|||. .+.+.+.+. +|++.+-..-
T Consensus 196 l~~Lk~Lv~~a~~-----rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 196 LPLIKRLIEQAKG-----RIVVMPGGGIT-DRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHHHHHHHTT-----SSEEEECTTCC-TTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHhCC-----CCEEEECCCcC-HHHHHHHHHhhCCCEEeECc
Confidence 4566677665432 69999999996 788888887 9999888753
No 260
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.04 E-value=0.011 Score=58.91 Aligned_cols=155 Identities=10% Similarity=-0.014 Sum_probs=105.6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+.++++ ..+++++.+.++.+.+. |+..+-+.++.+. ++.-.+.+++||+.+ +.+|.+..+
T Consensus 157 v~~y~s~g-~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~--------------~~~d~~~v~avR~a~G~~~~l~vDaN 221 (383)
T 3toy_A 157 IPAYDSYG-VLDARDDERTLRTACDEHGFRAIKSKGGHGD--------------LATDEAMIKGLRALLGPDIALMLDFN 221 (383)
T ss_dssp EEEEEECS-SCCHHHHHHHHHHHHHTSCCCEEEEECCSSC--------------HHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eEEeEecC-CCCHHHHHHHHHHHHHccCCcEEEEecCCCC--------------HHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 57777764 35788888888888788 9999999876432 233445677777764 789999987
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 222 ~~~~~~~A~~~~~~l~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~----- 263 (383)
T 3toy_A 222 QSLDPAEATRRIARLADYDLTWIE----------------EPVP-----------------QENLSGHAAVRERS----- 263 (383)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEE----------------CCCC-----------------cchHHHHHHHHhhc-----
Confidence 6665 245678888888877662 2221 11234455677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 264 --~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~-GGit~~~~i----a~~A~~~gi~ 317 (383)
T 3toy_A 264 --EIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKV-GGITGWLNV----AGQADAASIP 317 (383)
T ss_dssp --SSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTT-THHHHHHHH----HHHHHHHTCC
T ss_pred --CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 78888764433 233333333 3344556654
No 261
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=97.04 E-value=0.12 Score=49.86 Aligned_cols=161 Identities=13% Similarity=0.124 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 67 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 134 (304)
T 3l21_A 67 DGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHSIRLAKACAAEGAHGLLVV--TPYYS---------KPPQRGLQAHFT 134 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5678888999999999999999865 34421 124567888888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+++++||++--.|. +.-..+...++.+. ..|+-+= | ..+.
T Consensus 135 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 180 (304)
T 3l21_A 135 AVADATELPMLLYDIPGRSAVPIEPDTIRALASH--PNIVGVX--------D--------------AKAD---------- 180 (304)
T ss_dssp HHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEE--------C--------------CCCC----------
Confidence 99898999999976542 11123444455443 2222110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.. .. ++.|+ +|- -+.+..++.+||+++..+++-+. |..+.++.+
T Consensus 181 ~~~~~~~~~--~~-----~f~v~-~G~---d~~~l~~l~~Ga~G~is~~~n~~--P~~~~~l~~ 231 (304)
T 3l21_A 181 LHSGAQIMA--DT-----GLAYY-SGD---DALNLPWLRMGATGFISVIAHLA--AGQLRELLS 231 (304)
T ss_dssp HHHHHHHHH--HH-----CCEEE-ESS---GGGHHHHHHHTCCEEEESTHHHH--HHHHHHHHH
T ss_pred HHHHHHHhc--CC-----CeEEE-eCc---hHHHHHHHHcCCCEEEecHHhhh--HHHHHHHHH
Confidence 122333332 11 56665 441 24467889999999988877654 555554443
No 262
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=97.03 E-value=0.19 Score=48.66 Aligned_cols=165 Identities=15% Similarity=0.143 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|...+. -.+.+.+.+..+
T Consensus 63 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~~k-------p~~~~~l~~~f~ 132 (318)
T 3qfe_A 63 REERAQLIATARKAVGPDFPIMAGVG-AHSTRQVLEHINDASVAGANYVLVL--PPAYFGK-------ATTPPVIKSFFD 132 (318)
T ss_dssp HHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEC--CCCC----------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEe--CCcccCC-------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 5678888999999999999999763 4532100 013466778888
Q ss_pred HHhhccCccEEEEECCCCC---C-hHHHHHHHHH-cC-CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 212 WINAKATVPVWAKMTPNIT---D-ITEPARVALR-SG-SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~---~-~~~~a~~l~~-aG-adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.|.+.+++||++--.|..+ + ..+...++.+ .. +-||.-+ .|.
T Consensus 133 ~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKds-------------------------sgd------- 180 (318)
T 3qfe_A 133 DVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLT-------------------------CAS------- 180 (318)
T ss_dssp HHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEES-------------------------SCC-------
T ss_pred HHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeC-------------------------CCC-------
Confidence 8888889999998777532 1 2455555554 32 2222111 111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+.+.. .++.|+.. - -+.+..++.+|++++..+++-+. |..+.++.+
T Consensus 181 ---~~~~~~~~~~~~~----~~f~v~~G--~--d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~~ 234 (318)
T 3qfe_A 181 ---VGKITRLAATLPP----AAFSVFGG--Q--SDFLIGGLSVGSAGCIAAFANVF--PKTVSKIYE 234 (318)
T ss_dssp ---HHHHHHHHHHSCG----GGCEEEES--C--GGGHHHHHHTTCCEEECGGGGTC--HHHHHHHHH
T ss_pred ---HHHHHHHHHhcCC----CCEEEEEe--c--HHHHHHHHHCCCCEEEecHHHhh--HHHHHHHHH
Confidence 2334455554421 14544432 2 23467889999999998887653 555544443
No 263
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=97.03 E-value=0.09 Score=50.67 Aligned_cols=83 Identities=12% Similarity=0.064 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++..+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 64 ~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 131 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKTLKLVKQAEKLGANGVLVV--TPYYN---------KPTQEGLYQHYK 131 (306)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 445555555444332 2579999996 5677888999999999999998764 34421 124467888888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+.+++||++--.|
T Consensus 132 ~va~a~~lPiilYn~P 147 (306)
T 1o5k_A 132 YISERTDLGIVVYNVP 147 (306)
T ss_dssp HHHTTCSSCEEEEECH
T ss_pred HHHHhCCCCEEEEeCc
Confidence 8988889999997655
No 264
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=97.01 E-value=0.053 Score=53.19 Aligned_cols=83 Identities=17% Similarity=0.016 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++..+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 83 ~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~la~~A~~~Gadavlv~--~P~Y~---------~~s~~~l~~~f~ 150 (343)
T 2v9d_A 83 AEERKAIARFAIDHVDRRVPVLIGTG-GTNARETIELSQHAQQAGADGIVVI--NPYYW---------KVSEANLIRYFE 150 (343)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHHHHHHHHHHHHHTCSEEEEE--CCSSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444332 2579999996 5678888999999999999998764 34421 124567788888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+++++||++--.|
T Consensus 151 ~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 151 QVADSVTLPVMLYNFP 166 (343)
T ss_dssp HHHHTCSSCEEEEECH
T ss_pred HHHHhcCCCEEEEeCc
Confidence 8888889999997655
No 265
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=97.00 E-value=0.033 Score=51.99 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCH-H---------HHHHHHHhCCCEEEEhhHHHhh
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG-G---------DAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~-~---------da~~~l~aGAd~V~vgtall~~ 342 (422)
+++ ++++++.++ ..+|+..|||..- . .+.+++.+|||.+.+||+++..
T Consensus 164 ~~e-i~~lr~~~~------~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 221 (246)
T 2yyu_A 164 ANE-AAFIKERCG------ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA 221 (246)
T ss_dssp HHH-HHHHHHHHC------TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS
T ss_pred HHH-HHHHHHhcC------CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC
Confidence 345 667777663 2349999999732 1 4778889999999999999974
No 266
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.99 E-value=0.095 Score=50.14 Aligned_cols=161 Identities=16% Similarity=0.020 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 56 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 123 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKEAVELGKYATELGYDCLSAV--TPFYY---------KFSFPEIKHYYD 123 (293)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444332 2579999996 5677888999999999999998765 34421 123466777888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+-+= | ..+.
T Consensus 124 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------~--------------s~gd---------- 169 (293)
T 1f6k_A 124 TIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKN--PKVLGVK--------F--------------TAGD---------- 169 (293)
T ss_dssp HHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhCCCCEEEEECccccCcCCCHHHHHHHhcC--CCEEEEE--------E--------------CCCC----------
Confidence 88888899999976442 11123444444432 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++++..+ ++.|+. |. -+.+..++.+|++++..+++-+. |..+.++.
T Consensus 170 ~~~~~~~~~~~~------~f~v~~-G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~ 220 (293)
T 1f6k_A 170 FYLLERLKKAYP------NHLIWA-GF---DEMMLPAASLGVDGAIGSTFNVN--GVRARQIF 220 (293)
T ss_dssp HHHHHHHHHHCT------TSEEEE-CC---GGGHHHHHHTTCSEEEESTHHHH--HHHHHHHH
T ss_pred HHHHHHHHHhCC------CeEEEE-Cc---HHHHHHHHHCCCcEEEeCHHHhh--HHHHHHHH
Confidence 123344444321 555543 32 23478889999999999887653 45444443
No 267
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=96.99 E-value=0.014 Score=57.93 Aligned_cols=136 Identities=6% Similarity=-0.063 Sum_probs=93.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..++..+...+...++++.+++.|+..+-+.+++. +++.-.+.+++||+.+ +++|.+..+.
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~--------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 197 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR--------------SPQDDLIHMEALSNSLGSKAYLRVDVNQ 197 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS--------------CSHHHHHHHHHHHHHSSTTCCEEEECTT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC--------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 35656664333344555666666657999999987642 2233445677888876 5899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~------ 238 (370)
T 1chr_A 198 AWDEQVASVYIPELEALGVELIE----------------QPVG-----------------RENTQALRRLSDNN------ 238 (370)
T ss_dssp CCCTTHHHHHTHHHHTTTEEEEE----------------CCSC-----------------TTCHHHHHHHHHHS------
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHhhC------
Confidence 654 355678888888866552 2221 11234456677765
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHH
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGV 339 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtal 339 (422)
++||++..-+.+.+|+.+++..| +|.||+--.-
T Consensus 239 -~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 272 (370)
T 1chr_A 239 -RVAIMADESLSTLASAFDLARDRSVDVFSLKLCN 272 (370)
T ss_dssp -CSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTT
T ss_pred -CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccc
Confidence 79999999999999999999875 8999986543
No 268
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=96.98 E-value=0.02 Score=56.36 Aligned_cols=153 Identities=10% Similarity=0.052 Sum_probs=101.4
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+..++. ..+++++.+.++.+.+.|+..+-+.+++. ++.-.+.+++||+.+ ++++.+..+..
T Consensus 130 ~~~~~~~-~~~~~~~~~~a~~~~~~G~~~~K~K~g~~---------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLG-IDEPNVMAQKAVEKVKLGFDTLKIKVGTG---------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEEC-SCCHHHHHHHHHHHHHTTCSEEEEECCSC---------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeC-CCCHHHHHHHHHHHHHhCCCeEEEEeCCC---------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 3344554 34788888888877778999999997542 233445677777764 78999998766
Q ss_pred CC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 229 IT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 229 ~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------- 233 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE----------------QPVK-----------------RRDLEGLKYVTSQV------- 233 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------hhhHHHHHHHHHhC-------
Confidence 64 234566666666655442 2221 11234455677765
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 307 DYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++ .++.+++|+.
T Consensus 234 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~-GGit~~~~i----~~~A~~~gi~ 287 (354)
T 3jva_A 234 NTTIMADESCFDAQDALELVKKGTVDVINIKLMKC-GGIHEALKI----NQICETAGIE 287 (354)
T ss_dssp SSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhc-CCHHHHHHH----HHHHHHcCCe
Confidence 79999999999999999999875 79999875544 234433333 3445566664
No 269
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.98 E-value=0.087 Score=51.01 Aligned_cols=161 Identities=18% Similarity=0.104 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 74 ~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 141 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEAVELAKHAEKAGADAVLVV--TPYYN---------RPNQRGLYTHFS 141 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 345555454444332 2579999996 5678888999999999999998764 34421 123466778888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHH-cC-CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcch
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALR-SG-SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~-aG-adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p 286 (422)
.|.+.+++||++--.|. +.-..+...++.+ .. +-||.-+ .|.+
T Consensus 142 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKds-------------------------sgd~------- 189 (315)
T 3si9_A 142 SIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDA-------------------------TGKI------- 189 (315)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC-------------------------SCCT-------
T ss_pred HHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeC-------------------------CCCH-------
Confidence 88888899999976542 1112344555544 32 2222211 1111
Q ss_pred hHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 287 ~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
..+.++.+..++ ++.|+ +|. -..+..++.+|++++..+++-+. |..+.++.
T Consensus 190 ---~~~~~l~~~~~~-----~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~ 240 (315)
T 3si9_A 190 ---ERASEQREKCGK-----DFVQL-SGD---DCTALGFNAHGGVGCISVSSNVA--PKLCAQLH 240 (315)
T ss_dssp ---HHHHHHHHHHCS-----SSEEE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHH
T ss_pred ---HHHHHHHHHcCC-----CeEEE-ecC---HHHHHHHHHcCCCEEEecHHHhh--HHHHHHHH
Confidence 234455555532 56554 332 23467888999999998887654 44444443
No 270
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.98 E-value=0.26 Score=48.31 Aligned_cols=171 Identities=16% Similarity=0.156 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
++++..|.+..++. +.+++-+++ +.+. ++.+++.++|++.|--. + .++..+++++-+
T Consensus 90 ~e~~~~L~~~~~~~-Gi~~~st~~---d~~s----vd~l~~~~v~~~KI~S~--------~-----~~n~~LL~~va~-- 146 (349)
T 2wqp_A 90 EEDEIKLKEYVESK-GMIFISTLF---SRAA----ALRLQRMDIPAYKIGSG--------E-----CNNYPLIKLVAS-- 146 (349)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEEC---SHHH----HHHHHHHTCSCEEECGG--------G-----TTCHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHh-CCeEEEeeC---CHHH----HHHHHhcCCCEEEECcc--------c-----ccCHHHHHHHHh--
Confidence 45666777776665 889999996 3433 34455668999987521 1 245555555443
Q ss_pred hhccCccEEEEECCC-CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHH
Q 014581 214 NAKATVPVWAKMTPN-ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292 (422)
Q Consensus 214 r~~~~iPv~vKl~~~-~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v 292 (422)
+++||++|-... +.++...++.+.+.|.+-+.++.+..- |.+ ...+-|+.|
T Consensus 147 ---~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Y----------p~~---------------~~~~nL~ai 198 (349)
T 2wqp_A 147 ---FGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIY----------PTP---------------YEDVRLGGM 198 (349)
T ss_dssp ---TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCS----------SCC---------------GGGCCTHHH
T ss_pred ---cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCC----------CCC---------------hhhcCHHHH
Confidence 499999996543 123445566677888866665533210 000 012235677
Q ss_pred HHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH-----------HhhhhHHHHHHHHHHHHHHHHc
Q 014581 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV-----------MMHGYGLVKRLCEELKDFMKMH 361 (422)
Q Consensus 293 ~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal-----------l~~Gp~~i~~i~~~l~~~m~~~ 361 (422)
..+++..+ ++||.-++=-....-++.++++||+.|...--+ -.+ |.-++++.++++..-...
T Consensus 199 ~~lk~~f~------~lpVg~sdHt~G~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~-p~ef~~lv~~ir~~~~al 271 (349)
T 2wqp_A 199 NDLSEAFP------DAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMDRPGPDIVCSMN-PDTFKELKQGAHALKLAR 271 (349)
T ss_dssp HHHHHHCT------TSEEEEECCSSSSHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBC-HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHCC------CCCEEeCCCCCcHHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCC-HHHHHHHHHHHHHHHHHh
Confidence 77877652 588865543333566778889999999877221 112 667888888887644443
Q ss_pred C
Q 014581 362 N 362 (422)
Q Consensus 362 G 362 (422)
|
T Consensus 272 G 272 (349)
T 2wqp_A 272 G 272 (349)
T ss_dssp S
T ss_pred C
Confidence 3
No 271
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.97 E-value=0.0058 Score=60.54 Aligned_cols=128 Identities=21% Similarity=0.200 Sum_probs=85.8
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
+.|++.+=|.+.+.. ++|..+.++ |...+.-| .+++.+.+.++.+++...+|+.+-+..
T Consensus 45 ~~Pii~apM~~vt~~---~lA~avA~~GGlgii~~~-----------------~s~e~~~~~I~~vk~~~~~pvga~ig~ 104 (361)
T 3khj_A 45 KIPLISSAMDTVTEH---LMAVGMARLGGIGIIHKN-----------------MDMESQVNEVLKVKNSGGLRVGAAIGV 104 (361)
T ss_dssp SSSEEECSSTTTCSH---HHHHHHHHTTCEEEECSS-----------------SCHHHHHHHHHHHHHTTCCCCEEEECT
T ss_pred CCCEEeecCCCCCcH---HHHHHHHHcCCCeEEecC-----------------CCHHHHHHHHHHHHhccCceEEEEeCC
Confidence 568777665444433 455544433 44444211 235566778888888778999988764
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
+ + .+.++.+.++|+|.|++. +.. |.+ ...++.|+++++.+ +
T Consensus 105 ~--~-~e~a~~l~eaGad~I~ld-~a~-----------------------G~~-----~~~~~~i~~i~~~~-------~ 145 (361)
T 3khj_A 105 N--E-IERAKLLVEAGVDVIVLD-SAH-----------------------GHS-----LNIIRTLKEIKSKM-------N 145 (361)
T ss_dssp T--C-HHHHHHHHHTTCSEEEEC-CSC-----------------------CSB-----HHHHHHHHHHHHHC-------C
T ss_pred C--H-HHHHHHHHHcCcCeEEEe-CCC-----------------------CCc-----HHHHHHHHHHHHhc-------C
Confidence 3 2 678999999999988643 211 110 12245677777765 6
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 308 YSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
+|||+ |++.+.+++.+++.+|||+|.++
T Consensus 146 ~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 146 IDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp CEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred CcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 88886 67899999999999999999984
No 272
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.96 E-value=0.017 Score=56.60 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCC------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHH
Q 014581 135 TMLKEFKQLKALYPDKILIASIME------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~ 208 (422)
-.++.++.+++.. +.||.+-+.. +.+.+++.+++++++++|+|+|++..+........ ..+..-.+
T Consensus 196 ~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~-------~~~~~~~~ 267 (340)
T 3gr7_A 196 FLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMN-------VYPGYQVP 267 (340)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCC-------CCTTTTHH
T ss_pred HHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCC-------CCccccHH
Confidence 3455667777777 8899998852 24567899999999999999999864311100000 01111234
Q ss_pred HHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 209 iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+++.+|+.+++||++ ...+.+ .+.++.+.+.| +|.|.+.
T Consensus 268 ~~~~ik~~~~iPVi~--~GgI~s-~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 268 FAELIRREADIPTGA--VGLITS-GWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp HHHHHHHHTTCCEEE--ESSCCC-HHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHcCCcEEe--eCCCCC-HHHHHHHHHCCCeeEEEec
Confidence 566777777999987 344444 45677777777 9988544
No 273
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=96.96 E-value=0.023 Score=53.51 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=91.9
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc---
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK--- 216 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~--- 216 (422)
++.+++. +.+|+.-+...--+......++.+.+.|+|++.+|.+.. .+.++..++..++.
T Consensus 49 v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~G---------------~~~~~aa~~~~~~~~~~ 111 (259)
T 3tfx_A 49 IKKLTQQ--GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALGG---------------SQMIKSAKDGLIAGTPA 111 (259)
T ss_dssp HHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGC---------------HHHHHHHHHHHHHHSCT
T ss_pred HHHHHHC--CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCCC---------------HHHHHHHHHHHHHhccc
Confidence 4455553 778998886433344445566777788999999984311 23455555555432
Q ss_pred -cCccEEE---EECCC----------CC-C----hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccC
Q 014581 217 -ATVPVWA---KMTPN----------IT-D----ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277 (422)
Q Consensus 217 -~~iPv~v---Kl~~~----------~~-~----~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~g 277 (422)
...|.++ .++.. +. + +.++|+.+.++|++|++++. .
T Consensus 112 g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~---~---------------------- 166 (259)
T 3tfx_A 112 GHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSP---L---------------------- 166 (259)
T ss_dssp TSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCG---G----------------------
T ss_pred CCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECH---H----------------------
Confidence 1234332 33321 01 1 23567778889999997641 0
Q ss_pred CCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHH----H------HHHHHHhCCCEEEEhhHHHhh-hh-H
Q 014581 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG----D------AAEFILLGANTVQVCTGVMMH-GY-G 345 (422)
Q Consensus 278 G~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~----d------a~~~l~aGAd~V~vgtall~~-Gp-~ 345 (422)
-+..+++.++ +-.++.+.||.-.. | +.+++.+|||.+.+||+++.. .| .
T Consensus 167 -------------e~~~ir~~~~------~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~ 227 (259)
T 3tfx_A 167 -------------EVKKLHENIG------DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKA 227 (259)
T ss_dssp -------------GHHHHHHHHC------SSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHH
T ss_pred -------------HHHHHHhhcC------CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHH
Confidence 1234566664 23367788887431 1 778889999999999999874 23 3
Q ss_pred HHHHHHHHH
Q 014581 346 LVKRLCEEL 354 (422)
Q Consensus 346 ~i~~i~~~l 354 (422)
.++++++++
T Consensus 228 a~~~i~~~~ 236 (259)
T 3tfx_A 228 AYEAIKKEF 236 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555544
No 274
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.96 E-value=0.03 Score=54.79 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCC------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIME------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~ 207 (422)
.-.++.++.+++.. +.||.+-+.. +.+.++..+++++++++|+|+|++.-..... .... ..+..-.
T Consensus 195 r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-~~~~------~~~~~~~ 266 (338)
T 1z41_A 195 RFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH-ADIN------VFPGYQV 266 (338)
T ss_dssp HHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC-CCCC------CCTTTTH
T ss_pred HHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-CCCC------CCccchH
Confidence 34456677777777 8899988753 4568889999999999999999986432110 0000 0111123
Q ss_pred HHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+.++.+|+.+++||++ ...+.+ .+.+..+.+.| +|.|.+.
T Consensus 267 ~~~~~ir~~~~iPVi~--~Ggi~s-~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 267 SFAEKIREQADMATGA--VGMITD-GSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp HHHHHHHHHHCCEEEE--CSSCCS-HHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHCCCCEEE--ECCCCC-HHHHHHHHHcCCceEEeec
Confidence 4556677777999986 455544 45566777777 9988644
No 275
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=96.96 E-value=0.0076 Score=59.61 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=97.4
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+..+++...+++++.+.++++.+.|++.++++++ |. .+ .++++++|+.+ ++++.+.....
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~-~~------------~~----~e~v~avr~~~g~~~~l~vDan~~ 193 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE-PG------------WD----VEPVRAVRERFGDDVLLQVDANTA 193 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB-TT------------BS----HHHHHHHHHHHCTTSEEEEECTTC
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC-ch------------hH----HHHHHHHHHhcCCCceEEEeccCC
Confidence 44445532237888888888888889999999873 21 22 24556666654 67888876654
Q ss_pred C--CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 229 I--TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 229 ~--~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
+ .+ .++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 194 ~~~~~-~~~~~~l~~~~i~~iE----------------~P~~-----------------~~~~~~~~~l~~~~------- 232 (368)
T 1sjd_A 194 YTLGD-APQLARLDPFGLLLIE----------------QPLE-----------------EEDVLGHAELARRI------- 232 (368)
T ss_dssp CCGGG-HHHHHTTGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHTTC-------
T ss_pred CCHHH-HHHHHHHHhcCCCeEe----------------CCCC-----------------hhhHHHHHHHHHhC-------
Confidence 4 35 6777777788877652 1211 11234445566544
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 307 DYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.|++=-.-. .|..-..++ .++.+++|+.
T Consensus 233 ~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 286 (368)
T 1sjd_A 233 QTPICLDESIVSARAAADAIKLGAVQIVNIKPGRV-GGYLEARRV----HDVCAAHGIP 286 (368)
T ss_dssp SSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTT-TSHHHHHHH----HHHHHHTTCC
T ss_pred CCCEEECCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH----HHHHHHcCCc
Confidence 79999999999999999999876 79999843222 233322232 3455667765
No 276
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.95 E-value=0.058 Score=51.67 Aligned_cols=164 Identities=16% Similarity=0.136 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 54 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 121 (292)
T 3daq_A 54 TDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKSIQASIQAKALGADAIMLI--TPYYN---------KTNQRGLVKHFE 121 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHHHHHHHHcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 345444444444332 2579999996 5678888999999999999999764 34421 123466777888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+++++||++--.|. +.-..+...++.+. ..|+-+= | ..|.
T Consensus 122 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK--------~--------------ssgd---------- 167 (292)
T 3daq_A 122 AIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH--PYIVALK--------D--------------ATND---------- 167 (292)
T ss_dssp HHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEE--------E--------------CCCC----------
T ss_pred HHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEEE--------e--------------CCCC----------
Confidence 88888899999976552 11124445555443 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+..++ .++.|+ +|. -+.+..++.+||+++..+++-+. |..+.++.+
T Consensus 168 ~~~~~~~~~~~~~----~~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~~ 221 (292)
T 3daq_A 168 FEYLEEVKKRIDT----NSFALY-SGN---DDNVVEYYQRGGQGVISVIANVI--PKEFQALYD 221 (292)
T ss_dssp HHHHHHHHTTSCT----TTSEEE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHHH
T ss_pred HHHHHHHHHHCCC----CCEEEE-ECC---HHHHHHHHhcCCCEEEeCHHHhh--HHHHHHHHH
Confidence 2334455554431 135444 332 23477889999999998887654 555555543
No 277
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.95 E-value=0.025 Score=58.29 Aligned_cols=70 Identities=23% Similarity=0.278 Sum_probs=53.2
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..+.++.+.++|+|.|++.... +.+ +..++.|+++++.++ ++||
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~------------------------g~~-----~~~~~~v~~i~~~~p------~~~V 273 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAH------------------------GHS-----KGVIERVRWVKQTFP------DVQV 273 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC------------------------CSB-----HHHHHHHHHHHHHCT------TSEE
T ss_pred chHHHHHHHhhcccceEEecccC------------------------Ccc-----hhHHHHHHHHHHHCC------CceE
Confidence 56788999999999988654221 111 334577888888763 6788
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++ |++.+.+++.++..+|||+|-+|
T Consensus 274 i~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 274 IG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp EE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred EE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 77 77999999999999999999984
No 278
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=96.95 E-value=0.025 Score=56.53 Aligned_cols=155 Identities=9% Similarity=-0.026 Sum_probs=104.1
Q ss_pred CeEEEEeCCC---CCHHHHHHHHHHHHHh---CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccE
Q 014581 150 KILIASIMEE---YNKAAWEELIDRVEET---GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPV 221 (422)
Q Consensus 150 ~pvi~si~~~---~~~~~~~~~a~~~~~a---GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv 221 (422)
.|+.++++ . .+++++.+.++.+.+. |+..+-+.++.+. ++.-.+.+++||+.+ +.+|
T Consensus 158 v~~y~s~g-~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~--------------~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 158 VKAYNSNG-LWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRDD--------------PAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEEECSC-CCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCSS--------------HHHHHHHHHHHHHHHCTTSEE
T ss_pred eEEEEecc-cccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCCC--------------HHHHHHHHHHHHHHhCCCCEE
Confidence 46666664 3 4678888888877777 9999999876432 233445677777765 7899
Q ss_pred EEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 222 WAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 222 ~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
.+..+..++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 223 ~vDaN~~~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~ 269 (390)
T 3ugv_A 223 MVDFNQGLDMAEAMHRTRQIDDLGLEWIE----------------EPVV-----------------YDNFDGYAQLRHDL 269 (390)
T ss_dssp EEECTTCCCHHHHHHHHHHHTTSCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE----------------CCCC-----------------cccHHHHHHHHHhc
Confidence 999877664 245677778777777662 2221 11234455677765
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 270 -------~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~-GGit~~~~i----~~~A~~~gi~ 323 (390)
T 3ugv_A 270 -------KTPLMIGENFYGPREMHQALQAGACDLVMPDFMRI-GGVSGWMRA----AGVAGAWGIP 323 (390)
T ss_dssp -------SSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHH-THHHHHHHH----HHHHHHHTCC
T ss_pred -------CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999976 78888765443 233333333 3344556654
No 279
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.94 E-value=0.1 Score=50.26 Aligned_cols=161 Identities=20% Similarity=0.164 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 68 ~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~~~~l~~~f~ 135 (304)
T 3cpr_A 68 AAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTSVELAEAAASAGADGLLVV--TPYYS---------KPSQEGLLAHFG 135 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444332 2579999996 5678888999999999999998764 34321 123466778888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+.+= | ..|.
T Consensus 136 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 181 (304)
T 3cpr_A 136 AIAAATEVPICLYDIPGRSGIPIESDTMRRLSEL--PTILAVX--------D--------------AKGD---------- 181 (304)
T ss_dssp HHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEEe--------c--------------CCCC----------
Confidence 88888899999976542 11123444444332 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+.. ++.|+ +|. -+.+..++.+|++++..+++-+. |..+.++.+
T Consensus 182 ~~~~~~~~~~~-------~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~~ 232 (304)
T 3cpr_A 182 LVAATSLIKET-------GLAWY-SGD---DPLNLVWLALGGSGFISVIGHAA--PTALRELYT 232 (304)
T ss_dssp HHHHHHHHHHH-------CCEEE-ECS---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHHH
T ss_pred HHHHHHHHHhc-------CEEEE-ECc---HHHHHHHHHCCCCEEEecHHHhh--HHHHHHHHH
Confidence 12333444433 34443 332 23467888999999999887653 555544443
No 280
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.94 E-value=0.14 Score=51.05 Aligned_cols=222 Identities=16% Similarity=0.166 Sum_probs=122.4
Q ss_pred CcceEeCCeecC--CCceecC-CCCCCCHHH----HHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 46 DLSITVNGLQMP--NPFVIGS-GPPGTNYTV----MKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 46 dL~~~~~Gl~l~--nPi~~AA-g~~~~~~~~----~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
+..++++|+.+- +|+.+++ +-. .+.+. ++++.++|+-+|...+.. + |- . .+
T Consensus 128 ~t~i~i~~~~iG~~~~~~Iigpcsv-es~e~a~~~a~~~k~aGa~~vk~q~fk--p--------rt---s--------~~ 185 (385)
T 3nvt_A 128 DTIVTVKGLPIGNGEPVFVFGPCSV-ESYEQVAAVAESIKAKGLKLIRGGAFK--P--------RT---S--------PY 185 (385)
T ss_dssp CCCEEETTEEETSSSCEEEEECSBC-CCHHHHHHHHHHHHHTTCCEEECBSSC--C--------CS---S--------TT
T ss_pred CcEEEECCEEECCCCeEEEEEeCCc-CCHHHHHHHHHHHHHcCCCeEEccccc--C--------CC---C--------hH
Confidence 445677777765 3555443 222 45544 455556899888776653 1 10 0 11
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA 198 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~ 198 (422)
.++..+ .++++.+.+++++. +.|++..+. ++.. ++.+.+. +|++.|.-.
T Consensus 186 --~f~gl~-------~egl~~L~~~~~~~-Gl~~~te~~---d~~~----~~~l~~~-vd~lkIgs~------------- 234 (385)
T 3nvt_A 186 --DFQGLG-------LEGLKILKRVSDEY-GLGVISEIV---TPAD----IEVALDY-VDVIQIGAR------------- 234 (385)
T ss_dssp --SCCCCT-------HHHHHHHHHHHHHH-TCEEEEECC---SGGG----HHHHTTT-CSEEEECGG-------------
T ss_pred --hhcCCC-------HHHHHHHHHHHHHc-CCEEEEecC---CHHH----HHHHHhh-CCEEEECcc-------------
Confidence 112122 35667777777655 899999996 2322 2334454 899988632
Q ss_pred cccChhHHHHHHHHHhhccCccEEEEECCC--CCChHHHHHHHHHcCCCEEEEecC-CcccccccccCCCCCCCCCCCCc
Q 014581 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPN--ITDITEPARVALRSGSEGVSAINT-IMSVMGIDLKTLRPEPCVEGYST 275 (422)
Q Consensus 199 l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~--~~~~~~~a~~l~~aGadgi~v~n~-~~~~~~id~e~~~p~~~~~~~~~ 275 (422)
..++.+.+ +++.+ +++||++|-..+ +.++...++.+.+.|..-|++.-+ +...+.. +
T Consensus 235 ~~~n~~LL----~~~a~-~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~------~--------- 294 (385)
T 3nvt_A 235 NMQNFELL----KAAGR-VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKA------T--------- 294 (385)
T ss_dssp GTTCHHHH----HHHHT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS------S---------
T ss_pred cccCHHHH----HHHHc-cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCC------C---------
Confidence 11333333 33332 489999997552 224556667778889876766654 2110000 0
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEe----cCCCCH--HHHHHHHHhCCCEEEEhh------HH----
Q 014581 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGI----GGVETG--GDAAEFILLGANTVQVCT------GV---- 339 (422)
Q Consensus 276 ~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~----GGI~s~--~da~~~l~aGAd~V~vgt------al---- 339 (422)
. .-+.++.+..+++.. ++||+.. +|-+.. .-++.++++||+++.|=. ++
T Consensus 295 ---~-----~~ldl~~i~~lk~~~-------~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~ 359 (385)
T 3nvt_A 295 ---R-----NTLDISAVPILKKET-------HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSA 359 (385)
T ss_dssp ---S-----SBCCTTHHHHHHHHB-------SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTT
T ss_pred ---c-----cccCHHHHHHHHHhc-------CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCccc
Confidence 0 011244566677665 6888665 232222 346678899999766643 21
Q ss_pred -HhhhhHHHHHHHHHHHH
Q 014581 340 -MMHGYGLVKRLCEELKD 356 (422)
Q Consensus 340 -l~~Gp~~i~~i~~~l~~ 356 (422)
... |.-++++.++++.
T Consensus 360 ~sl~-p~el~~lv~~i~~ 376 (385)
T 3nvt_A 360 QQMD-IPEFEEFWNAILA 376 (385)
T ss_dssp TSBC-HHHHHHHHHHHHH
T ss_pred ccCC-HHHHHHHHHHHHH
Confidence 112 5567777776653
No 281
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=96.93 E-value=0.0081 Score=59.64 Aligned_cols=156 Identities=10% Similarity=-0.023 Sum_probs=101.7
Q ss_pred CeEEEEeCC--CCCHHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEE
Q 014581 150 KILIASIME--EYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAK 224 (422)
Q Consensus 150 ~pvi~si~~--~~~~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vK 224 (422)
.|+.+++.. ..+++++.+.++.+.+. |+..+-+.++++. ++.-.+.+++||+.+ +.++.+.
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~--------------~~~d~~~v~avR~~~g~~~~l~vD 203 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDD--------------PNIDIARLTAVRERVDSAVRIAID 203 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSS--------------HHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCC--------------HHHHHHHHHHHHHHcCCCCcEEee
Confidence 577776421 23788888888777777 9999999987543 233456777888875 7899999
Q ss_pred ECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 225 MTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 225 l~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
.+..++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 204 an~~~~~~~a~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~--- 247 (372)
T 3tj4_A 204 GNGKWDLPTCQRFCAAAKDLDIYWFE----------------EPLW-----------------YDDVTSHARLARNT--- 247 (372)
T ss_dssp CTTCCCHHHHHHHHHHTTTSCEEEEE----------------SCSC-----------------TTCHHHHHHHHHHC---
T ss_pred CCCCCCHHHHHHHHHHHhhcCCCEEE----------------CCCC-----------------chhHHHHHHHHhhc---
Confidence 877664 234556666666554441 2221 11234555677765
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+.+|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 248 ----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~i----a~~A~~~gi~ 301 (372)
T 3tj4_A 248 ----SIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRL-GGITEYIQV----ADLALAHRLP 301 (372)
T ss_dssp ----SSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTT-THHHHHHHH----HHHHHHTTCC
T ss_pred ----CCCEEeCCCccCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999976 68998854332 223222232 3445566664
No 282
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.93 E-value=0.0047 Score=58.79 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=62.3
Q ss_pred HHHHHHHhhccC--ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 207 EEVCGWINAKAT--VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 207 ~~iv~~vr~~~~--iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
.+-++.+++... +++.+-. .+. +-++.+.++|+|+|.+.|..
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev----~tl-ee~~~A~~aGaD~I~ld~~~------------------------------- 212 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC----ESF-EEAKNAMNAGADIVMCDNLS------------------------------- 212 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE----SSH-HHHHHHHHHTCSEEEEETCC-------------------------------
T ss_pred HHHHHHHHHhCCCCceEEEEc----CCH-HHHHHHHHcCCCEEEECCCC-------------------------------
Confidence 455666666553 4666632 233 34566678999999765411
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
| +.++++++.+.+.++ +++|.++||| +.+.+.+++.+|||.+.+|+.+..
T Consensus 213 -~---~~l~~~v~~l~~~~~--~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~ 262 (273)
T 2b7n_A 213 -V---LETKEIAAYRDAHYP--FVLLEASGNI-SLESINAYAKSGVDAISVGALIHQ 262 (273)
T ss_dssp -H---HHHHHHHHHHHHHCT--TCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHT
T ss_pred -H---HHHHHHHHHhhccCC--CcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcC
Confidence 1 233444444433222 6999999999 899999999999999999998653
No 283
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.92 E-value=0.089 Score=52.23 Aligned_cols=264 Identities=14% Similarity=0.131 Sum_probs=140.4
Q ss_pred ceEeCCeec---CCCceec--CCCCCCCHHHHHHHH----HcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccc
Q 014581 48 SITVNGLQM---PNPFVIG--SGPPGTNYTVMKRAF----DEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118 (422)
Q Consensus 48 ~~~~~Gl~l---~nPi~~A--Ag~~~~~~~~~~~~~----~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~ 118 (422)
..++++..+ ..|+++| +.-...+.+.+++++ ++|+.+|=..+...+.. -.+....+....+. + ...+
T Consensus 15 ~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl--~s~~~~~fq~~~~~-~-~~~y 90 (385)
T 1vli_A 15 AFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRM--YQKDPGLYKTAAGK-D-VSIF 90 (385)
T ss_dssp EEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGG--TSCCC----------C-CCHH
T ss_pred heeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcc--cCcchhhhccCCCC-C-ccHH
Confidence 445666666 4688888 434445666655554 47999888777765321 01000111111000 0 0000
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc
Q 014581 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA 198 (422)
Q Consensus 119 ~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~ 198 (422)
.+ +...++ .++++..|.+..++. +.+++-+++ +.+. ++.+++.++|++.|--. +
T Consensus 91 e~-~~~~~l-----~~e~~~~L~~~~~~~-Gi~~~stpf---D~~s----vd~l~~~~vd~~KIgS~--------~---- 144 (385)
T 1vli_A 91 SL-VQSMEM-----PAEWILPLLDYCREK-QVIFLSTVC---DEGS----ADLLQSTSPSAFKIASY--------E---- 144 (385)
T ss_dssp HH-GGGBSS-----CGGGHHHHHHHHHHT-TCEEECBCC---SHHH----HHHHHTTCCSCEEECGG--------G----
T ss_pred HH-HHhcCC-----CHHHHHHHHHHHHHc-CCcEEEccC---CHHH----HHHHHhcCCCEEEECcc--------c----
Confidence 00 011111 245556676666654 788888886 3433 35566678999987521 1
Q ss_pred cccChhHHHHHHHHHhhccCccEEEEECCC-CCChHHHHHHHHHcCCCEEE-EecCCcccccccccCCCCCCCCCCCCcc
Q 014581 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPN-ITDITEPARVALRSGSEGVS-AINTIMSVMGIDLKTLRPEPCVEGYSTP 276 (422)
Q Consensus 199 l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~-~~~~~~~a~~l~~aGadgi~-v~n~~~~~~~id~e~~~p~~~~~~~~~~ 276 (422)
.++..+++++-+ +++||++|-... +.++...++.+.+.|..-|+ ++.+. .- |.+
T Consensus 145 -~~N~pLL~~va~-----~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s-~Y---------Ptp-------- 200 (385)
T 1vli_A 145 -INHLPLLKYVAR-----LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVA-KY---------PAP-------- 200 (385)
T ss_dssp -TTCHHHHHHHHT-----TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECS-SS---------SCC--------
T ss_pred -ccCHHHHHHHHh-----cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccC-CC---------CCC--------
Confidence 245555555443 499999996543 22345556667788884444 44321 10 000
Q ss_pred CCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC-HHHHHHHHHhCCCEEEEhhHHHhh----------hhH
Q 014581 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET-GGDAAEFILLGANTVQVCTGVMMH----------GYG 345 (422)
Q Consensus 277 gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s-~~da~~~l~aGAd~V~vgtall~~----------Gp~ 345 (422)
...+-|+.|..+++..+ ++||.-++=-.. ..-++.++++||+.|...--+=.. .|.
T Consensus 201 -------~~~~nL~aI~~Lk~~f~------~lpVG~SdHt~G~~~~~~AAvAlGA~iIEkHftldra~~G~D~~~SL~P~ 267 (385)
T 1vli_A 201 -------PEYSNLSVIPMLAAAFP------EAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPD 267 (385)
T ss_dssp -------GGGCCTTHHHHHHHHST------TSEEEEEECCSSSSHHHHHHHHTTCSEEEEEBCSCTTSSCSSCTTSBCHH
T ss_pred -------hhhcCHHHHHHHHHHcC------CCCEEeCCCCCCchHHHHHHHHcCCCEEEeCCCccccCCCCchhhhCCHH
Confidence 01122456777777652 578865543333 567778889999998877222111 266
Q ss_pred HHHHHHHHHHHHH----HHcCCCCHHHhhcCCcccCC
Q 014581 346 LVKRLCEELKDFM----KMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 346 ~i~~i~~~l~~~m----~~~G~~si~d~~G~~~~~~~ 378 (422)
-++++.++++..- ...+-.......|...+...
T Consensus 268 ef~~lv~~ir~i~~~~~~~~~~~~~~~alG~~~k~~~ 304 (385)
T 1vli_A 268 ELKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTT 304 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCHHHHCCSSCCCC
T ss_pred HHHHHHHHHHHHHhhcccccccchHHHHhCcccCccC
Confidence 7888888877543 22233333466666554443
No 284
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.92 E-value=0.12 Score=49.38 Aligned_cols=83 Identities=18% Similarity=0.084 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 52 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 119 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEAIELSVFAEDVGADAVLSI--TPYYN---------KPTQEGLRKHFG 119 (289)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 445555555444432 2579999996 5677888999999999999998764 34421 124467778888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+++++||++--.|
T Consensus 120 ~ia~a~~lPiilYn~P 135 (289)
T 2yxg_A 120 KVAESINLPIVLYNVP 135 (289)
T ss_dssp HHHHHCSSCEEEEECH
T ss_pred HHHHhcCCCEEEEeCc
Confidence 8888889999997655
No 285
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=96.91 E-value=0.0066 Score=61.42 Aligned_cols=166 Identities=11% Similarity=0.104 Sum_probs=109.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc------------------c--ccChhHHHHH
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA------------------V--GQDCRLLEEV 209 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~------------------l--~~~~~~v~~i 209 (422)
.|+.+++. +.+++++.+.++++.+.|+..+-+.++.|... ..+|.. + ..+.+...++
T Consensus 139 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~--~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 139 ILSYTHAN-GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIA--KTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS--CCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeccCcccc--ccccccccccccccccccccccccccchhHHHHHHHH
Confidence 56766664 46788988888888888999999998764310 001000 0 0113455677
Q ss_pred HHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 210 CGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 210 v~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+++||+.+ +.+|.+..+..++ +..++++.+.+.|++.|. +|.+. ..
T Consensus 216 v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------qP~~~-------~d------- 265 (424)
T 3v3w_A 216 FAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME----------------DAVPA-------EN------- 265 (424)
T ss_dssp HHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE----------------CCSCC-------SS-------
T ss_pred HHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE----------------CCCCh-------Hh-------
Confidence 88888876 7899999876654 356778888888888773 22210 11
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++..+++++.. ++||++.+.+.+.+++.+++..| +|.||+--.-. .|..-..++. .+.+.+|+
T Consensus 266 ---~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~-GGit~~~~ia----~~A~~~gi 329 (424)
T 3v3w_A 266 ---QESFKLIRQHT-------TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA-GGISQMRRIA----DFASLFHV 329 (424)
T ss_dssp ---TTHHHHHHHHC-------CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT-THHHHHHHHH----HHHHTTTC
T ss_pred ---HHHHHHHHhhC-------CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhc-CCHHHHHHHH----HHHHHcCC
Confidence 12345567665 79999999999999999999987 78998875443 2343333332 34445555
No 286
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.91 E-value=0.072 Score=48.86 Aligned_cols=148 Identities=14% Similarity=0.121 Sum_probs=95.2
Q ss_pred CCeEEEEeCC-----CCCHHHHHHH---HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCcc
Q 014581 149 DKILIASIME-----EYNKAAWEEL---IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220 (422)
Q Consensus 149 ~~pvi~si~~-----~~~~~~~~~~---a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iP 220 (422)
+.||.+=|.. .|+.+++..+ ++.+.+.|+|+|.+.+-.|.. .-|.+.+++++++.. ..|
T Consensus 54 ~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg----------~iD~~~~~~Li~~a~---~~~ 120 (224)
T 2bdq_A 54 GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN----------HIDTEAIEQLLPATQ---GLP 120 (224)
T ss_dssp TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS----------SBCHHHHHHHHHHHT---TCC
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC----------CcCHHHHHHHHHHhC---CCe
Confidence 7899888852 3677776654 456678899999998766653 146677888887653 456
Q ss_pred EEEEECCC-C--CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHH
Q 014581 221 VWAKMTPN-I--TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297 (422)
Q Consensus 221 v~vKl~~~-~--~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~ 297 (422)
+..=-.-+ . .+..+..+.+.+.|++.|.-++.... ++ . ...+..++++.+
T Consensus 121 vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~---------~~--------a----------~~g~~~L~~Lv~ 173 (224)
T 2bdq_A 121 LVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNG---------EP--------I----------IENIKHIKALVE 173 (224)
T ss_dssp EEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSC---------CC--------G----------GGGHHHHHHHHH
T ss_pred EEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCC---------Cc--------H----------HHHHHHHHHHHH
Confidence 55422222 2 45677788899999999864442211 00 0 112456666665
Q ss_pred HhhccCCCCCceEEEecCCCCHHHHHHHH-HhCCCEEEEhhHHHhh
Q 014581 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFI-LLGANTVQVCTGVMMH 342 (422)
Q Consensus 298 ~~~~~~~~~~ipIIa~GGI~s~~da~~~l-~aGAd~V~vgtall~~ 342 (422)
...+ ++.|++.|||+ .+.+.+.+ .+|++.+-....+...
T Consensus 174 ~a~~-----ri~Im~GgGV~-~~Ni~~l~~~tGv~e~H~s~i~~~~ 213 (224)
T 2bdq_A 174 YANN-----RIEIMVGGGVT-AENYQYICQETGVKQAHGTRITQMA 213 (224)
T ss_dssp HHTT-----SSEEEECSSCC-TTTHHHHHHHHTCCEEEETTCC---
T ss_pred hhCC-----CeEEEeCCCCC-HHHHHHHHHhhCCCEEccccccCCC
Confidence 4332 78999999996 67788877 5899999865444333
No 287
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.90 E-value=0.12 Score=49.19 Aligned_cols=166 Identities=16% Similarity=0.127 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
++.++.+++++++. +.|++..+. +++. ++.+.+. +|.+.|--. ..++...++++-+
T Consensus 88 ~~gl~~l~~~~~~~-Gl~~~te~~---d~~~----~~~l~~~-vd~~kIgs~-------------~~~n~~ll~~~a~-- 143 (276)
T 1vs1_A 88 LEGLKLLRRAGDEA-GLPVVTEVL---DPRH----VETVSRY-ADMLQIGAR-------------NMQNFPLLREVGR-- 143 (276)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEECC---CGGG----HHHHHHH-CSEEEECGG-------------GTTCHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHc-CCcEEEecC---CHHH----HHHHHHh-CCeEEECcc-------------cccCHHHHHHHHc--
Confidence 56667777777665 889999996 2333 2334455 799987521 1244455555543
Q ss_pred hhccCccEEEEECCC--CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHH
Q 014581 214 NAKATVPVWAKMTPN--ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291 (422)
Q Consensus 214 r~~~~iPv~vKl~~~--~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~ 291 (422)
+++||++|-... +.++...++.+...|-.-+++.-|.... +-++ ......++.
T Consensus 144 ---~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~-------------------yp~y---~~~~vdl~~ 198 (276)
T 1vs1_A 144 ---SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRT-------------------FEPS---TRFTLDVAA 198 (276)
T ss_dssp ---HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCC-------------------SCCS---SSSBCBHHH
T ss_pred ---cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCC-------------------CCCc---CcchhCHHH
Confidence 389999996543 2345666777788898555554321110 0000 001234566
Q ss_pred HHHHHHHhhccCCCCCceEEEe----cCCCC--HHHHHHHHHhCCCEEEEhhHHH-----hh-----hhHHHHHHHHHHH
Q 014581 292 VMSIAKMMKSEFNDKDYSLSGI----GGVET--GGDAAEFILLGANTVQVCTGVM-----MH-----GYGLVKRLCEELK 355 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa~----GGI~s--~~da~~~l~aGAd~V~vgtall-----~~-----Gp~~i~~i~~~l~ 355 (422)
+..+++.. ++||++. +|..+ ..-++.++.+||+++++=+-+- .+ .|.-++++.++++
T Consensus 199 i~~lk~~~-------~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~ 271 (276)
T 1vs1_A 199 VAVLKEAT-------HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELR 271 (276)
T ss_dssp HHHHHHHB-------SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHH
T ss_pred HHHHHHHh-------CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHH
Confidence 77777764 6888762 24433 4556777889999888765431 12 2445666665554
No 288
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.90 E-value=0.028 Score=51.85 Aligned_cols=51 Identities=22% Similarity=0.243 Sum_probs=40.9
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHH
Q 014581 307 DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~ 359 (422)
+++|+..|||.+.+|+..+...|+|++-||++++.. .+ +.++.++|...|.
T Consensus 173 ~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a-~~-~~~~i~~l~~~~~ 223 (226)
T 1w0m_A 173 EVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA-KD-PYAKIVELAKPLS 223 (226)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC-SS-HHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC-cC-HHHHHHHHHHHHH
Confidence 789999999999999999999999999999999985 33 3344455544443
No 289
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=96.86 E-value=0.0056 Score=61.29 Aligned_cols=152 Identities=11% Similarity=0.020 Sum_probs=101.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+.++ + ..++++.+.++++.+.|+..+.+++++ +++.-.+.+++||+.+ +.+|.|..+.
T Consensus 147 v~~y~~-g--~~~e~~~~~a~~~~~~G~~~iKlK~g~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~ 208 (392)
T 3ddm_A 147 IGVYAS-G--INPENPEDVVARKAAEGYRAFKLKVGF---------------DDARDVRNALHVRELLGAATPLMADANQ 208 (392)
T ss_dssp EEEEEE-E--ECSSSHHHHHHHHHHHTCCCEEEECSS---------------CHHHHHHHHHHHHHHHCSSSCEEEECTT
T ss_pred eeEEee-c--CCHHHHHHHHHHHHHcCCCEEEEecCC---------------CHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 455555 2 236677888888878899999999753 2334456777888875 7899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH-HHHHHHHHHHhhccCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA-LGKVMSIAKMMKSEFN 304 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a-l~~v~~i~~~~~~~~~ 304 (422)
.++ +..++++.+.+.|++.|. +|.+ +.. ++..+++++..
T Consensus 209 ~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~-----------------~~d~~~~~~~l~~~~----- 250 (392)
T 3ddm_A 209 GWDLPRARQMAQRLGPAQLDWLE----------------EPLR-----------------ADRPAAEWAELAQAA----- 250 (392)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTSCHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHHHHHHHhCCCEEE----------------CCCC-----------------ccchHHHHHHHHHhc-----
Confidence 664 345677888888887662 2221 111 34455677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+.+|+.+++..| +|.||+--.-. .|..-..++ ..+.+.+|+.
T Consensus 251 --~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGit~~~~i----a~~A~~~gi~ 304 (392)
T 3ddm_A 251 --PMPLAGGENIAGVAAFETALAARSLRVMQPDLAKW-GGFSGCLPV----ARAVVAAGLR 304 (392)
T ss_dssp --SSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTT-THHHHHHHH----HHHHHHTTCE
T ss_pred --CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchh-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 78888753322 233323333 3345566653
No 290
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.86 E-value=0.051 Score=51.27 Aligned_cols=149 Identities=17% Similarity=0.207 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
+++++.+++++++. +.|++..+. ++.. ++.+.+. +|.+.|.-. + .++...++++
T Consensus 73 ~egl~~l~~~~~~~-Gl~~~te~~---d~~~----~~~l~~~-vd~~kIga~--------~-----~~n~~ll~~~---- 126 (262)
T 1zco_A 73 EKALRWMREAADEY-GLVTVTEVM---DTRH----VELVAKY-SDILQIGAR--------N-----SQNFELLKEV---- 126 (262)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEECC---CGGG----HHHHHHH-CSEEEECGG--------G-----TTCHHHHHHH----
T ss_pred HHHHHHHHHHHHHc-CCcEEEeeC---CHHh----HHHHHhh-CCEEEECcc--------c-----ccCHHHHHHH----
Confidence 66777777777665 889999996 2333 2334555 899998732 1 1333444443
Q ss_pred hhccCccEEEEECCC--CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHH
Q 014581 214 NAKATVPVWAKMTPN--ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291 (422)
Q Consensus 214 r~~~~iPv~vKl~~~--~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~ 291 (422)
.+ +++||++|-... +.++...++.+...|..-+++.-+.... ..+|. .....++.
T Consensus 127 a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~-------------------~~~y~---~~~v~L~a 183 (262)
T 1zco_A 127 GK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRT-------------------FETAT---RFTLDISA 183 (262)
T ss_dssp TT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCC-------------------SCCSS---SSBCCTTH
T ss_pred Hh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCC-------------------CCCcC---hhhcCHHH
Confidence 33 599999996543 3345556666778887666665542110 00110 11233456
Q ss_pred HHHHHHHhhccCCCCCceEEEe----cCCCC--HHHHHHHHHhCCCEEEEhhH
Q 014581 292 VMSIAKMMKSEFNDKDYSLSGI----GGVET--GGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa~----GGI~s--~~da~~~l~aGAd~V~vgta 338 (422)
+..+++.. ++|||+. +|... +.-+..++.+||+++++=+-
T Consensus 184 i~~lk~~~-------~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 184 VPVVKELS-------HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp HHHHHHHB-------SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred HHHHHhhh-------CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEec
Confidence 66677764 6888764 33322 12355677899998887654
No 291
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.85 E-value=0.33 Score=46.88 Aligned_cols=80 Identities=15% Similarity=0.032 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ + +.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 64 ~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 130 (314)
T 3d0c_A 64 IEEAKQVATRVTELVNGRATVVAGIG-Y-SVDTAIELGKSAIDSGADCVMIH--QPVHP---------YITDAGAVEYYR 130 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHHHHHHHHHTTCSEEEEC--CCCCS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHHHHHHHHHHHHcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999997 5 77888999999999999999764 34421 123466778888
Q ss_pred HHhhccCccEEEEE
Q 014581 212 WINAKATVPVWAKM 225 (422)
Q Consensus 212 ~vr~~~~iPv~vKl 225 (422)
+|.+++++||++--
T Consensus 131 ~va~a~~lPiilYn 144 (314)
T 3d0c_A 131 NIIEALDAPSIIYF 144 (314)
T ss_dssp HHHHHSSSCEEEEE
T ss_pred HHHHhCCCCEEEEe
Confidence 88888899999865
No 292
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=96.85 E-value=0.036 Score=55.02 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=103.2
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+..++. ..++++..+.++.+.+.|+..+-+.+++. +++.-.+.+++||+.+ ++++.+..+.
T Consensus 136 v~~~~t~~-~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~--------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIA-DPDFDADLERMRAMVPAGHTVFKMKTGVK--------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEEC-CSSHHHHHHHHHHHTTTTCCEEEEECSSS--------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecC-CCCHHHHHHHHHHHHHcCCCEEEEccCCC--------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 45666775 34677766666666667999999997532 1233345667777765 6899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 201 ~~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------ 241 (377)
T 3my9_A 201 ALTPFGAMKILRDVDAFRPTFIE----------------QPVP-----------------RRHLDAMAGFAAAL------ 241 (377)
T ss_dssp CCCTTTHHHHHHHHHTTCCSCEE----------------CCSC-----------------TTCHHHHHHHHHHC------
T ss_pred CcCHHHHHHHHHHHhhcCCCEEE----------------CCCC-----------------ccCHHHHHHHHHhC------
Confidence 554 466788999988877662 2221 11234455677765
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 242 -~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~i----~~~a~~~gi~ 295 (377)
T 3my9_A 242 -DTPILADESCFDAVDLMEVVRRQAADAISVKIMKC-GGLMKAQSL----MAIADTAGLP 295 (377)
T ss_dssp -SSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHH-TSHHHHHHH----HHHHHHHTCC
T ss_pred -CCCEEECCccCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH----HHHHHHcCCe
Confidence 79999999999999999999876 88998765443 234333333 2344556664
No 293
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.85 E-value=0.014 Score=57.89 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=66.4
Q ss_pred HHHHHHHHHhhCC-CCeEEEEeCC------C-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHH
Q 014581 136 MLKEFKQLKALYP-DKILIASIME------E-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 136 ~l~~i~~~k~~~~-~~pvi~si~~------~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~ 207 (422)
.++.++.+++..+ +.||.+-+.. + .+.+++.++++.++++|+|+|++..+......... ..+..-.
T Consensus 211 ~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~------~~~~~~~ 284 (363)
T 3l5l_A 211 LLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIP------WGPAFMG 284 (363)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCC------CCTTTTH
T ss_pred HHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccC------CCcchhH
Confidence 4556677777654 6789987742 1 34678889999999999999998753211100000 0111123
Q ss_pred HHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
++++.+|+.+++||++ ...+.+ .+.++.+.+.| +|.|.+.
T Consensus 285 ~~~~~ir~~~~iPVi~--~GgI~s-~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 285 PIAERVRREAKLPVTS--AWGFGT-PQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHHTCCEEE--CSSTTS-HHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHcCCcEEE--eCCCCC-HHHHHHHHHCCCccEEEec
Confidence 4566677777999986 344444 45677777777 8977543
No 294
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.84 E-value=0.045 Score=52.43 Aligned_cols=162 Identities=17% Similarity=0.158 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 120 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGRIPVIAGTG-ANATAEAISLTQRFNDSGIVGCLTV--TPYYN---------RPSQEGLYQHFK 120 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHTTTSSCSEEEEE--CCCSS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHHHHHHHhcCCCEEEEC--CCCCC---------CCCHHHHHHHHH
Confidence 445555555444332 2479999996 5677888899999999999998754 34421 124567888888
Q ss_pred HHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|. +.-..+...++.+. ..|+-+= ...|.+
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK----------------------~s~gd~--------- 167 (292)
T 2ojp_A 121 AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNIIGIX----------------------EATGNL--------- 167 (292)
T ss_dssp HHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEEEC-----------------------CCSCCT---------
T ss_pred HHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEEEEe----------------------CCCCCH---------
Confidence 89888899999875442 11123444444432 2232110 011221
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
..+.++++..++ ++.|+ +|- -..+..++.+|++++..+++-+. |..+.++.
T Consensus 168 -~~~~~~~~~~~~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~ 218 (292)
T 2ojp_A 168 -TRVNQIKELVSD-----DFVLL-SGD---DASALDFMQYGGHGVISVTANVA--ARDMAQMC 218 (292)
T ss_dssp -HHHHHHHTTSCT-----TSBCE-ESC---GGGHHHHHHTTCCEEEESGGGTC--HHHHHHHH
T ss_pred -HHHHHHHHhcCC-----CEEEE-ECc---HHHHHHHHHCCCcEEEeCHHHhh--HHHHHHHH
Confidence 233445444432 45443 331 23467888999999999887654 45444443
No 295
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.84 E-value=0.064 Score=53.71 Aligned_cols=219 Identities=18% Similarity=0.230 Sum_probs=107.1
Q ss_pred CHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCCC
Q 014581 70 NYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPD 149 (422)
Q Consensus 70 ~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~ 149 (422)
+.+.++.+.++|+-+|++-|.. |. .+.+.+.++++++.+ +
T Consensus 145 ~~e~~~~lveaGvdvIvldta~-----------------------------G~----------~~~~~e~I~~ik~~~-~ 184 (400)
T 3ffs_A 145 EIERAKLLVEAGVDVIVLDSAH-----------------------------GH----------SLNIIRTLKEIKSKM-N 184 (400)
T ss_dssp -CHHHHHHHHHTCSEEEECCSC-----------------------------CS----------BHHHHHHHHHHHTTC-C
T ss_pred HHHHHHHHHHcCCCEEEEeCCC-----------------------------CC----------cccHHHHHHHHHhcC-C
Confidence 3677888899999988764321 10 123445567777766 7
Q ss_pred CeEEE-EeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-Ccccccccc-ccChhHHHHHHHHHhhccCccEEEEEC
Q 014581 150 KILIA-SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM-PERKMGAAV-GQDCRLLEEVCGWINAKATVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~-si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~-~~~~~G~~l-~~~~~~v~~iv~~vr~~~~iPv~vKl~ 226 (422)
.|+++ ++. +.+ .++.++++|+|+|-+... |-.. ..+.. ... ..+...+.++.+.+++ .++||+.=
T Consensus 185 i~Vi~g~V~---t~e----~A~~a~~aGAD~I~vG~g-~Gs~~~tr~~-~g~g~p~~~al~~v~~~~~~-~~IPVIA~-- 252 (400)
T 3ffs_A 185 IDVIVGNVV---TEE----ATKELIENGADGIKVGIG-PGSICTTRIV-AGVGVPQITAIEKCSSVASK-FGIPIIAD-- 252 (400)
T ss_dssp CEEEEEEEC---SHH----HHHHHHHTTCSEEEECC----------CC-SCBCCCHHHHHHHHHHHHTT-TTCCEEEE--
T ss_pred CeEEEeecC---CHH----HHHHHHHcCCCEEEEeCC-CCcCcccccc-cccchhHHHHHHHHHHHHHh-cCCCEEec--
Confidence 88886 664 343 457778899999999542 2110 00100 001 1233455566555433 48999873
Q ss_pred CCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCC--CC--CCccCCCCCCCcchhHHHHHHHHHHHhhcc
Q 014581 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EG--YSTPGGYSCKAVHPIALGKVMSIAKMMKSE 302 (422)
Q Consensus 227 ~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~--~~--~~~~gG~sG~~i~p~al~~v~~i~~~~~~~ 302 (422)
..+.+...++ ++.++||++|.+...+... .| .|...+ .| |-.+.|+. ++.... +--.++
T Consensus 253 GGI~~~~di~-kalalGAd~V~vGt~f~~t----~E--s~~~~~~~~g~~~k~y~Gm~-------s~~am~---~~~~~r 315 (400)
T 3ffs_A 253 GGIRYSGDIG-KALAVGASSVMIGSILAGT----EE--SPGEKELIGDTVYKYYRGMG-------SVGAMK---SGSGDR 315 (400)
T ss_dssp SCCCSHHHHH-HHHTTTCSEEEECGGGTTB----TT--SSCCEEESSSSEEEC---------------------------
T ss_pred CCCCCHHHHH-HHHHcCCCEEEEChHHhcC----CC--CCchhhhcCCeeeeeecCcc-------hHHHHh---ccccch
Confidence 4455555544 5567899999876655331 01 111000 00 00122221 111110 000000
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCCCHHHhhcC
Q 014581 303 FNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372 (422)
Q Consensus 303 ~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~si~d~~G~ 372 (422)
+ ..++.. -.+.+.-|.++-.-+++=+. +++..+..+|+.-|.-.|..+|+||+-.
T Consensus 316 y--------~~~~~~----~~~~~~eG~~~~v~~~g~~~---~~~~~~~~glr~~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 316 Y--------FQEKRP----ENKMVPEGIEGRVKYKGEME---GVVYQLVGGLRSCMGYLGSASIEELWKK 370 (400)
T ss_dssp ------------------------------CEECCBCHH---HHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred h--------hccccc----ccccCCCCcEEecCCCCCHH---HHHHHHHHHHHHhhhhcCcccHHHHHhC
Confidence 0 001110 12333445554443333222 4788999999999999999999999754
No 296
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.83 E-value=0.14 Score=50.19 Aligned_cols=169 Identities=19% Similarity=0.197 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
++.++.+++++++. +.|++..+. ++... +.+.+. +|++.|--. ..++...++++-
T Consensus 156 ~egl~~l~~~~~e~-Gl~~~te~~---d~~~~----~~l~~~-vd~lkIgAr-------------~~~n~~LL~~va--- 210 (350)
T 1vr6_A 156 EKGLEYLREAADKY-GMYVVTEAL---GEDDL----PKVAEY-ADIIQIGAR-------------NAQNFRLLSKAG--- 210 (350)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEECS---SGGGH----HHHHHH-CSEEEECGG-------------GTTCHHHHHHHH---
T ss_pred HHHHHHHHHHHHHc-CCcEEEEeC---CHHHH----HHHHHh-CCEEEECcc-------------cccCHHHHHHHH---
Confidence 46677777777665 889999996 23332 334444 799987521 124455555544
Q ss_pred hhccCccEEEEECCC--CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHH
Q 014581 214 NAKATVPVWAKMTPN--ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291 (422)
Q Consensus 214 r~~~~iPv~vKl~~~--~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~ 291 (422)
.+++||++|-... +.++...++.+...|-.-+++.-+.... + | ++ ...-..++.
T Consensus 211 --~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~t--y------p-----------~~---~~~~vdl~a 266 (350)
T 1vr6_A 211 --SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRT--F------E-----------KA---TRNTLDISA 266 (350)
T ss_dssp --TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCC--S------C-----------CS---SSSBCCTTH
T ss_pred --ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCC--C------C-----------Cc---ChhhhhHHH
Confidence 2489999996553 2345666777888898666664221100 0 0 00 001122455
Q ss_pred HHHHHHHhhccCCCCCceEEE-e---cCCCC--HHHHHHHHHhCCCEEEEhhHHH-----hh-----hhHHHHHHHHHHH
Q 014581 292 VMSIAKMMKSEFNDKDYSLSG-I---GGVET--GGDAAEFILLGANTVQVCTGVM-----MH-----GYGLVKRLCEELK 355 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa-~---GGI~s--~~da~~~l~aGAd~V~vgtall-----~~-----Gp~~i~~i~~~l~ 355 (422)
+..+++.. ++||++ + +|-+. ..-++.++++||+++++=+-+- .+ .|.-++++.++++
T Consensus 267 i~~lk~~~-------~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir 339 (350)
T 1vr6_A 267 VPIIRKES-------HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMK 339 (350)
T ss_dssp HHHHHHHB-------SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHH
T ss_pred HHHHHHhh-------CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHH
Confidence 66677754 688877 2 24433 4556777889999887764321 12 2556777777776
Q ss_pred HHH
Q 014581 356 DFM 358 (422)
Q Consensus 356 ~~m 358 (422)
..-
T Consensus 340 ~i~ 342 (350)
T 1vr6_A 340 KLA 342 (350)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 297
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.83 E-value=0.38 Score=46.35 Aligned_cols=160 Identities=15% Similarity=0.126 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhhCC-CCeEEEEeCCCCCHHHHHHHHHHHHHhCC-CEEEEccCCCCCCCccccccccccChhHHHHHH
Q 014581 133 LETMLKEFKQLKALYP-DKILIASIMEEYNKAAWEELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVC 210 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~-~~pvi~si~~~~~~~~~~~~a~~~~~aGa-D~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv 210 (422)
.++..+.++.+.+... ..||++.++ +.+.++-.+.++.+++.|+ |++-+- .|... ..+.+.+.+..
T Consensus 59 ~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~la~~A~~~Ga~davlv~--~P~y~---------~~s~~~l~~~f 126 (311)
T 3h5d_A 59 HDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDSIEFVKEVAEFGGFAAGLAI--VPYYN---------KPSQEGMYQHF 126 (311)
T ss_dssp HHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHHHHHHHHHHHSCCCSEEEEE--CCCSS---------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHHhcCCCcEEEEc--CCCCC---------CCCHHHHHHHH
Confidence 4555555665555432 469999996 5678888999999999987 998764 34421 12346677888
Q ss_pred HHHhhccCccEEEEECCC---CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh
Q 014581 211 GWINAKATVPVWAKMTPN---ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI 287 (422)
Q Consensus 211 ~~vr~~~~iPv~vKl~~~---~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~ 287 (422)
+.|.+++++||++--.|. +.-..+...++.+. ..|+.+= | .. .
T Consensus 127 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ss-d--------- 172 (311)
T 3h5d_A 127 KAIADASDLPIIIYNIPGRVVVELTPETMLRLADH--PNIIGVK--------E--------------CT-S--------- 172 (311)
T ss_dssp HHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEE--------E--------------CS-C---------
T ss_pred HHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEEE--------e--------------CC-C---------
Confidence 889888899999976552 11123444455443 2232110 0 00 1
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHH
Q 014581 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 288 al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i 350 (422)
+..+.++.+..++ ++.|+ +|. -+.+..++.+||+++..+++-+. |..+.++
T Consensus 173 -~~~~~~~~~~~~~-----~f~v~-~G~---d~~~l~~l~~Ga~G~is~~an~~--P~~~~~l 223 (311)
T 3h5d_A 173 -LANMAYLIEHKPE-----EFLIY-TGE---DGDAFHAMNLGADGVISVASHTN--GDEMHEM 223 (311)
T ss_dssp -HHHHHHHHHHCCS-----SCEEE-ECC---GGGHHHHHHHTCCEEEESTHHHH--HHHHHHH
T ss_pred -HHHHHHHHHHcCC-----CEEEE-ECc---HHHHHHHHHcCCCEEEechhhhC--HHHHHHH
Confidence 2334455555532 45554 332 23467888999999998887654 4444444
No 298
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=96.83 E-value=0.0061 Score=61.70 Aligned_cols=147 Identities=9% Similarity=-0.050 Sum_probs=99.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccc-----cc-----------cC----hhHHHHH
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA-----VG-----------QD----CRLLEEV 209 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~-----l~-----------~~----~~~v~~i 209 (422)
.|+.+++. +.+++++.+.++++.+.|+..+-+.++.|... ..+|.. .. .+ .+...++
T Consensus 140 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~--~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 216 (425)
T 3vcn_A 140 VTVYGHAN-GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLA--STYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKL 216 (425)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS--CCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeecCcccc--ccccccccccccCcccccccccccccchhHHHHHHHH
Confidence 46766664 46788988888888888999999998764210 000000 00 00 2334567
Q ss_pred HHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 210 CGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 210 v~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+++||+.+ +.+|.+..+..++ +..++++.+.+.|++.|. +|.+. ..
T Consensus 217 v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------qP~~~-------~d------- 266 (425)
T 3vcn_A 217 FERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE----------------DSVPA-------EN------- 266 (425)
T ss_dssp HHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE----------------CCSCC-------SS-------
T ss_pred HHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE----------------CCCCh-------hh-------
Confidence 77888775 7899999876554 356778888888887773 12210 11
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtal 339 (422)
++..+++++.+ ++||++.+.+.+.+++.+++..| +|.|++--.-
T Consensus 267 ---~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 311 (425)
T 3vcn_A 267 ---QAGFRLIRQHT-------TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLH 311 (425)
T ss_dssp ---TTHHHHHHHHC-------CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred ---HHHHHHHHhcC-------CCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhh
Confidence 12345577665 79999999999999999999987 7899886544
No 299
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.82 E-value=0.031 Score=57.61 Aligned_cols=140 Identities=19% Similarity=0.261 Sum_probs=87.1
Q ss_pred CCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHH
Q 014581 64 SGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQL 143 (422)
Q Consensus 64 Ag~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~ 143 (422)
-|......+.++++.++|+-++++.+... + .+.+++.++++
T Consensus 226 vG~~~d~~~~a~~l~~aG~d~I~id~a~g-------------------------------~--------~~~~~~~i~~i 266 (496)
T 4fxs_A 226 VGAAPGNEERVKALVEAGVDVLLIDSSHG-------------------------------H--------SEGVLQRIRET 266 (496)
T ss_dssp CCSSSCCHHHHHHHHHTTCSEEEEECSCT-------------------------------T--------SHHHHHHHHHH
T ss_pred eccccchHHHHHHHHhccCceEEeccccc-------------------------------c--------chHHHHHHHHH
Confidence 34433568889999999999887654210 0 13445567788
Q ss_pred HhhCCCCeEEE-EeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC-cccccccc-ccChhHHHHHHHHHhhccCcc
Q 014581 144 KALYPDKILIA-SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP-ERKMGAAV-GQDCRLLEEVCGWINAKATVP 220 (422)
Q Consensus 144 k~~~~~~pvi~-si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~-~~~~G~~l-~~~~~~v~~iv~~vr~~~~iP 220 (422)
++.+|+.||++ ++. +.+ .++.+.++|+|+|.+..+ |-... .+.. ..+ ..+...+.++.+++++. ++|
T Consensus 267 r~~~p~~~Vi~g~v~---t~e----~a~~l~~aGaD~I~Vg~g-~Gs~~~tr~~-~g~g~p~~~~i~~v~~~~~~~-~iP 336 (496)
T 4fxs_A 267 RAAYPHLEIIGGNVA---TAE----GARALIEAGVSAVKVGIG-PGSICTTRIV-TGVGVPQITAIADAAGVANEY-GIP 336 (496)
T ss_dssp HHHCTTCCEEEEEEC---SHH----HHHHHHHHTCSEEEECSS-CCTTBCHHHH-HCCCCCHHHHHHHHHHHHGGG-TCC
T ss_pred HHHCCCceEEEcccC---cHH----HHHHHHHhCCCEEEECCC-CCcCcccccc-cCCCccHHHHHHHHHHHhccC-CCe
Confidence 88888889887 453 343 467778899999998753 22110 0100 001 12445666777666543 799
Q ss_pred EEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcc
Q 014581 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255 (422)
Q Consensus 221 v~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~ 255 (422)
|++ ...+.+..+++ ++.++|||++.+...+.+
T Consensus 337 VIa--~GGI~~~~di~-kala~GAd~V~iGs~f~~ 368 (496)
T 4fxs_A 337 VIA--DGGIRFSGDIS-KAIAAGASCVMVGSMFAG 368 (496)
T ss_dssp EEE--ESCCCSHHHHH-HHHHTTCSEEEESTTTTT
T ss_pred EEE--eCCCCCHHHHH-HHHHcCCCeEEecHHHhc
Confidence 997 34555555555 455789999987765543
No 300
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=96.82 E-value=0.02 Score=57.24 Aligned_cols=148 Identities=13% Similarity=0.014 Sum_probs=99.2
Q ss_pred CeEEEEeCC----CCCHH----HHHHHHHHHHHhCCCEEEEc-cCCCCCCCccccccccccChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIME----EYNKA----AWEELIDRVEETGIDAIEVN-FSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~----~~~~~----~~~~~a~~~~~aGaD~iElN-~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+.+++.. ..+++ ++.+.++++.+.|+..+-++ ++.+. .+++.-.+++++||+.+ +
T Consensus 133 v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~------------~~~~~d~~~v~avR~a~G~d 200 (394)
T 3mqt_A 133 LTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDK------------VSDKEIVAYLRELREVIGWD 200 (394)
T ss_dssp BCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTT------------SCHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCCc------------cCHHHHHHHHHHHHHHhCCC
Confidence 467777751 22344 45556677777899999984 43110 23455567788888875 7
Q ss_pred ccEEEEECCCC-C--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHH
Q 014581 219 VPVWAKMTPNI-T--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295 (422)
Q Consensus 219 iPv~vKl~~~~-~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i 295 (422)
.+|.+..+..+ + +..++++.+.+.|++.|. +|.+ |..++..+++
T Consensus 201 ~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~-----------------~~~~~~~~~l 247 (394)
T 3mqt_A 201 MDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIE----------------ACLQ-----------------HDDLIGHQKL 247 (394)
T ss_dssp SEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEE----------------SCSC-----------------TTCHHHHHHH
T ss_pred CeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEE----------------CCCC-----------------cccHHHHHHH
Confidence 89999988777 3 346778888888887762 2221 1123445667
Q ss_pred HHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHH
Q 014581 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRL 350 (422)
Q Consensus 296 ~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i 350 (422)
++.. ++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++
T Consensus 248 ~~~~-------~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~-GGit~~~~i 295 (394)
T 3mqt_A 248 AAAI-------NTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRC-GGVTELLRI 295 (394)
T ss_dssp HHHS-------SSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTS-SCHHHHHHH
T ss_pred HhhC-------CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCcccc-CCHHHHHHH
Confidence 7765 79999999999999999999875 89999865443 234434444
No 301
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.79 E-value=0.15 Score=49.15 Aligned_cols=165 Identities=16% Similarity=0.133 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|.... . ..+.+.+.+..+
T Consensus 66 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~~-~------~~s~~~l~~~f~ 135 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMPKNRLLLAGSG-CESTQATVEMTVSMAQVGADAAMVV--TPCYYR-G------RMSSAALIHHYT 135 (307)
T ss_dssp HHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEE--CCCTTG-G------GCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHHHHHHHHHHHcCCCEEEEc--CCCcCC-C------CCCHHHHHHHHH
Confidence 455555565555543 2579999996 5678888999999999999999764 354310 0 024567888888
Q ss_pred HHhhccCccEEEEECCCCC---ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNIT---DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~---~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+.+++||++--.|..+ -..+...++.+. ..|+-+= | ..|.
T Consensus 136 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK--------d--------------ssgd---------- 181 (307)
T 3s5o_A 136 KVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH--PNIVGMX--------D--------------SGGD---------- 181 (307)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC--CCEEEEE--------c--------------CCCC----------
Confidence 8888889999997655321 123444455443 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++.+...+ .++.|+ +|. -+.+..++.+|++++..+++-+. |..+.++.
T Consensus 182 ~~~~~~~~~~~~~----~~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~--P~~~~~l~ 234 (307)
T 3s5o_A 182 VTRIGLIVHKTRK----QDFQVL-AGS---AGFLMASYALGAVGGVCALANVL--GAQVCQLE 234 (307)
T ss_dssp HHHHHHHHHHTTT----SSCEEE-ESS---GGGHHHHHHHTCCEEECGGGGTC--HHHHHHHH
T ss_pred HHHHHHHHHhccC----CCeEEE-eCc---HHHHHHHHHcCCCEEEechhhhh--HHHHHHHH
Confidence 2334445444321 156554 432 23578889999999998887654 44444443
No 302
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=96.74 E-value=0.043 Score=55.70 Aligned_cols=168 Identities=10% Similarity=0.039 Sum_probs=107.2
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC-----------ccc-------------ccccc--ccCh
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP-----------ERK-------------MGAAV--GQDC 203 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~-----------~~~-------------~G~~l--~~~~ 203 (422)
.|+.+++. ..+++++.+.++.+.+.|+.++-+.++...... ..+ -|..+ ..+.
T Consensus 145 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 145 IALYVHTD-GADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp EEEEEEEC-CSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eEEEEECC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 46776765 568889888888887889999999876321000 000 00000 0013
Q ss_pred hHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 204 RLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 204 ~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
+...+.+++||+.+ +++|.|..+..++ +..++++.+.+.|++.|. +|.+
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~----------- 276 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE----------------DPVA----------- 276 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE----------------CSSC-----------
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE----------------CCCC-----------
Confidence 44566788888876 7899999887665 245667777778877662 2221
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHH
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFM 358 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m 358 (422)
|..++..+++++.. ++||++...+.+.+|+.+++..| +|.||+--.-. .|..-..++. .+.
T Consensus 277 ------~~d~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGit~~~~ia----~~A 338 (440)
T 3t6c_A 277 ------PENTEWLKMLRQQS-------STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSI-GGITPAKKIA----IYS 338 (440)
T ss_dssp ------GGGGGGHHHHHHHC-------CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHHH----HHH
T ss_pred ------hhhHHHHHHHHhhc-------CCCEEeCcccCCHHHHHHHHHcCCccceeechhhh-CCHHHHHHHH----HHH
Confidence 11122344566665 79999999999999999999976 78998875543 2344344433 344
Q ss_pred HHcCC
Q 014581 359 KMHNF 363 (422)
Q Consensus 359 ~~~G~ 363 (422)
+.+|+
T Consensus 339 ~~~gi 343 (440)
T 3t6c_A 339 ELNGV 343 (440)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 45555
No 303
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=96.74 E-value=0.063 Score=51.28 Aligned_cols=223 Identities=14% Similarity=0.132 Sum_probs=120.7
Q ss_pred ceEeCCeecC--CCceecCCCCC-CCHHH----HHHHHH----cCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581 48 SITVNGLQMP--NPFVIGSGPPG-TNYTV----MKRAFD----EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK 116 (422)
Q Consensus 48 ~~~~~Gl~l~--nPi~~AAg~~~-~~~~~----~~~~~~----~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~ 116 (422)
.+++.++.+- .|+.+=|||-+ .+.+. .+++.+ .|+++| .|..+.++ ||-.
T Consensus 4 ~~~~~~i~iG~~~~~~vIaGPCsie~~~~~~e~A~~lk~~~~~~~~~~v-~k~~f~Ka-------pRTs----------- 64 (288)
T 3tml_A 4 SMKLCDFEVGLDQPFFLIAGTCVVESEQMTIDTAGRLKEICEKLNVPFI-YKSSYDKA-------NRSS----------- 64 (288)
T ss_dssp CEEETTEEESTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEE-EECBC-------------------------
T ss_pred eEEECCEEECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCCEE-EecccccC-------CCCC-----------
Confidence 3556777776 36776667654 23333 333333 487755 56544331 2210
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccc
Q 014581 117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMG 196 (422)
Q Consensus 117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G 196 (422)
.+ +|+.++ +++-++.+++++++. +.|++-.+. +++.. +.+.+. +|.+.|--.
T Consensus 65 ~~--sf~Glg------~~~GL~~L~~~~~e~-Glp~~tev~---d~~~v----~~l~~~-vd~lkIgA~----------- 116 (288)
T 3tml_A 65 GK--SFRGLG------MDEGLRILSEVKRQL-GLPVLTDVH---SIDEI----EQVASV-VDVLQTPAF----------- 116 (288)
T ss_dssp ---------C------HHHHHHHHHHHHHHH-CCCEEEECC---SGGGH----HHHHHH-CSEEEECGG-----------
T ss_pred CC--CcCCcC------HHHHHHHHHHHHHhc-CCeEEEEeC---CHHHH----HHHHHh-CCEEEECcc-----------
Confidence 11 233333 567777788877665 889999886 33332 234444 899987521
Q ss_pred cccccChhHHHHHHHHHhhccCccEEEEECC--CCCChHHHHHHHHHcCC------CEEEEecCCcccccccccCCCCCC
Q 014581 197 AAVGQDCRLLEEVCGWINAKATVPVWAKMTP--NITDITEPARVALRSGS------EGVSAINTIMSVMGIDLKTLRPEP 268 (422)
Q Consensus 197 ~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGa------dgi~v~n~~~~~~~id~e~~~p~~ 268 (422)
..++.+.++ ++. .+++||++|-.. +..++...++.+.+.|. +-|++.-+...
T Consensus 117 --~~~n~~LLr----~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~------------- 176 (288)
T 3tml_A 117 --LCRQTDFIH----ACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS------------- 176 (288)
T ss_dssp --GTTCHHHHH----HHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE-------------
T ss_pred --cccCHHHHH----HHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC-------------
Confidence 123444444 333 358999999764 34467777888888886 66776654321
Q ss_pred CCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEe---------------cCCCCH--HHHHHHHHhCCC
Q 014581 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGI---------------GGVETG--GDAAEFILLGAN 331 (422)
Q Consensus 269 ~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~---------------GGI~s~--~da~~~l~aGAd 331 (422)
+ ++.- .-..++.+..+++ . ++||+.. ||-+.. .-++.++++|||
T Consensus 177 -------y-~~~~---~~vdl~~i~~lk~-~-------~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~Gad 237 (288)
T 3tml_A 177 -------F-GYNN---LVSDMRSLAIMRE-T-------NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVA 237 (288)
T ss_dssp -------C-SSSC---EECCHHHHHHGGG-G-------SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCS
T ss_pred -------C-CCCc---CcCCHHHHHHHHh-c-------CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCC
Confidence 1 1100 0113566666665 4 7899873 443332 346778899999
Q ss_pred EEEEhhHH-----Hhhh-----hHHHHHHHHHHHH
Q 014581 332 TVQVCTGV-----MMHG-----YGLVKRLCEELKD 356 (422)
Q Consensus 332 ~V~vgtal-----l~~G-----p~~i~~i~~~l~~ 356 (422)
++.|=+-+ +.++ |.-++++.++++.
T Consensus 238 Gl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ir~ 272 (288)
T 3tml_A 238 GLFMETHPNPAEAKSDGPNAVPLNRMGALLETLVT 272 (288)
T ss_dssp EEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHHHH
T ss_pred EEEEeeccChhhcCCchhhcCCHHHHHHHHHHHHH
Confidence 66653211 1121 4556777766654
No 304
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=96.74 E-value=0.087 Score=49.47 Aligned_cols=153 Identities=11% Similarity=0.137 Sum_probs=89.6
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc-cC
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK-AT 218 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~-~~ 218 (422)
++.+++. +.+|+.=+...--+......++.+.+.|+|++.+|.+.. .+.++..++..++. .+
T Consensus 71 v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~~~G---------------~~~~~~a~~~~~~~g~~ 133 (255)
T 3ldv_A 71 VRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGG---------------ERMMAASREILEPYGKE 133 (255)
T ss_dssp HHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGC---------------HHHHHHHHHHHGGGGGG
T ss_pred HHHHHhc--CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEeccCC---------------HHHHHHHHHHHhhcCCC
Confidence 4555553 678998775332344445566777788999999985311 23455555555432 13
Q ss_pred ccEEEEECC---C---------CC-----ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 219 VPVWAKMTP---N---------IT-----DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 219 iPv~vKl~~---~---------~~-----~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
.|..+-+.. . +. .+.++++.+.++|++|++++.+
T Consensus 134 ~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~----------------------------- 184 (255)
T 3ldv_A 134 RPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQ----------------------------- 184 (255)
T ss_dssp SCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCHH-----------------------------
T ss_pred CceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECHH-----------------------------
Confidence 444433221 1 11 1245566667788888864421
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCH-HH---------HHHHHHhCCCEEEEhhHHHhh-hh-HHHHH
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG-GD---------AAEFILLGANTVQVCTGVMMH-GY-GLVKR 349 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~-~d---------a~~~l~aGAd~V~vgtall~~-Gp-~~i~~ 349 (422)
-+..+|+.++. ++ ++.+.||.-. .+ ..+++.+|||.+.+||+++.. .| ..+++
T Consensus 185 ---------e~~~iR~~~g~-----~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~ 249 (255)
T 3ldv_A 185 ---------EASLLKQHLGR-----EF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEE 249 (255)
T ss_dssp ---------HHHHHHHHHCT-----TS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHH
T ss_pred ---------HHHHHHHhcCC-----Cc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHH
Confidence 13456666642 34 6677777631 12 567788999999999999974 23 34555
Q ss_pred HHHH
Q 014581 350 LCEE 353 (422)
Q Consensus 350 i~~~ 353 (422)
|+++
T Consensus 250 i~~e 253 (255)
T 3ldv_A 250 INSS 253 (255)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 305
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=96.72 E-value=0.015 Score=58.28 Aligned_cols=158 Identities=9% Similarity=0.036 Sum_probs=102.6
Q ss_pred CeEEEEeCC----CCCHH----HHHHHHHHHHHhCCCEEEEc-cCCCCCCCccccccccccChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIME----EYNKA----AWEELIDRVEETGIDAIEVN-FSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~----~~~~~----~~~~~a~~~~~aGaD~iElN-~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+.+++.. ..+++ ++.+.++.+.+.|+..+-++ ++.+. .+++.-.+++++||+.+ +
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~------------~~~~~d~e~v~avR~a~G~d 205 (394)
T 3mkc_A 138 VHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKAD------------WSTKEVAYYLRELRGILGHD 205 (394)
T ss_dssp ECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCC------------CCHHHHHHHHHHHHHHHCSS
T ss_pred eEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCc------------cCHHHHHHHHHHHHHHhCCC
Confidence 356667641 12344 45556666777899999984 43211 23455567788888875 7
Q ss_pred ccEEEEECCCC-C--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHH
Q 014581 219 VPVWAKMTPNI-T--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295 (422)
Q Consensus 219 iPv~vKl~~~~-~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i 295 (422)
.+|.+..+..+ + +..++++.+.+.|++.|. +|.+ |..++..+++
T Consensus 206 ~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l 252 (394)
T 3mkc_A 206 TDMMVDYLYRFTDWYEVARLLNSIEDLELYFAE----------------ATLQ-----------------HDDLSGHAKL 252 (394)
T ss_dssp SEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEE----------------SCSC-----------------TTCHHHHHHH
T ss_pred CeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEE----------------CCCC-----------------chhHHHHHHH
Confidence 89999988767 3 346778888888887662 1221 1123445667
Q ss_pred HHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 296 ~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++.. ++||++.+.+.+.+|+.+++..| +|.|++--.-. .|..-..++ ..+.+.+|+.
T Consensus 253 ~~~~-------~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~-GGit~~~~i----a~~A~~~gi~ 310 (394)
T 3mkc_A 253 VENT-------RSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRC-GGLTELRRI----TEMATANNVQ 310 (394)
T ss_dssp HHHC-------SSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTT-THHHHHHHH----HHHHHHTTCE
T ss_pred HhhC-------CCCEEeCCCCCCHHHHHHHHHcCCCCeEecCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 7765 79999999999999999999976 79999865443 234333333 3344555553
No 306
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.70 E-value=0.29 Score=46.78 Aligned_cols=161 Identities=13% Similarity=0.038 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhCC-CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHH
Q 014581 133 LETMLKEFKQLKALYP-DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVC 210 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~-~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv 210 (422)
.++..+.++.+.+... ..||++.++ +.+.++-.+.++.++++|+|++-+- .|... . .+.+.+.+..
T Consensus 55 ~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~s~~~l~~~f 122 (294)
T 3b4u_A 55 SRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDAADQSAEALNAGARNILLA--PPSYF---------KNVSDDGLFAWF 122 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS---------CSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHHHHHHHHHHhcCCCEEEEc--CCcCC---------CCCCHHHHHHHH
Confidence 4566666666655443 469999996 5677888999999999999998764 34421 1 2456788888
Q ss_pred HHHhhcc---CccEEEEECCC---CCChHHHHHHHH-HcC--CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 211 GWINAKA---TVPVWAKMTPN---ITDITEPARVAL-RSG--SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 211 ~~vr~~~---~iPv~vKl~~~---~~~~~~~a~~l~-~aG--adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
+.|.+.+ ++||++--.|. +.-..+...++. +.. +-||.-+ .|.
T Consensus 123 ~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds-------------------------~gd--- 174 (294)
T 3b4u_A 123 SAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDS-------------------------SGN--- 174 (294)
T ss_dssp HHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEEC-------------------------CCC---
T ss_pred HHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEEC-------------------------CCC---
Confidence 8888888 89999976542 111234444444 431 2222111 111
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHH
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~ 352 (422)
+..+.++.+..+ ++.|+ +| +-..+..++.+|++++..+++-+. |..+.++.+
T Consensus 175 -------~~~~~~~~~~~~------~f~v~-~G---~d~~~l~~l~~G~~G~is~~~n~~--P~~~~~l~~ 226 (294)
T 3b4u_A 175 -------WSHTERLLKEHG------DLAIL-IG---DERDLARGVRLGGQGAISGVANFL--TQEVRAMAV 226 (294)
T ss_dssp -------HHHHHHHHHHHT------TSEEE-EC---CHHHHHHHHHTTCCEEEESGGGTC--HHHHHHHHT
T ss_pred -------HHHHHHHHHhCC------CeEEE-Ec---cHHHHHHHHHCCCCEEEeCHHHhC--HHHHHHHHH
Confidence 233444555442 35443 33 245577889999999999887664 566555553
No 307
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=96.70 E-value=0.13 Score=47.91 Aligned_cols=154 Identities=14% Similarity=0.159 Sum_probs=88.8
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc--c
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK--A 217 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~--~ 217 (422)
++.+++. +.+|+.=+...--+......++.+.+.|+|++.+|.+. | .+.++..++..++. .
T Consensus 52 v~~L~~~--g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~~~---------G------~~~~~~a~~~~~~~~~~ 114 (239)
T 3tr2_A 52 VEELMQK--GYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHISG---------G------RTMMETVVNALQSITLK 114 (239)
T ss_dssp HHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG---------C------HHHHHHHHHHHHTCCCS
T ss_pred HHHHHhc--CCCEEEEecccccchHHHHHHHHHHhCCCCEEEEeccC---------C------HHHHHHHHHHHHhcCcC
Confidence 4455553 67888877533234444556677888899999998531 1 23455555555443 1
Q ss_pred CccEEEEE---CCC---------CC-----ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCC
Q 014581 218 TVPVWAKM---TPN---------IT-----DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280 (422)
Q Consensus 218 ~iPv~vKl---~~~---------~~-----~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~s 280 (422)
+.|.++-+ +.. +. .+.++|+.+.++|++|++++.+
T Consensus 115 ~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~~---------------------------- 166 (239)
T 3tr2_A 115 EKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSAQ---------------------------- 166 (239)
T ss_dssp SCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCHH----------------------------
T ss_pred CCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECch----------------------------
Confidence 24543332 111 01 1345666677889999875531
Q ss_pred CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHH-H---------HHHHHHhCCCEEEEhhHHHhh-hh-HHHH
Q 014581 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG-D---------AAEFILLGANTVQVCTGVMMH-GY-GLVK 348 (422)
Q Consensus 281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~-d---------a~~~l~aGAd~V~vgtall~~-Gp-~~i~ 348 (422)
+ +..+++.++. ++ ++.+.||.-.. + ..+++.+|||.+.+||+++.. .| ..++
T Consensus 167 ---------e-~~~ir~~~~~-----~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~ 230 (239)
T 3tr2_A 167 ---------E-AALLRKQFDR-----NF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALE 230 (239)
T ss_dssp ---------H-HHHHHTTCCT-----TS-EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ---------h-HHHHHHhcCC-----Cc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHH
Confidence 1 1234554432 33 66778886322 1 557788999999999999874 23 3455
Q ss_pred HHHHHH
Q 014581 349 RLCEEL 354 (422)
Q Consensus 349 ~i~~~l 354 (422)
+|++++
T Consensus 231 ~i~~~i 236 (239)
T 3tr2_A 231 AIDKDI 236 (239)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 665554
No 308
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=96.70 E-value=0.095 Score=52.24 Aligned_cols=163 Identities=15% Similarity=0.072 Sum_probs=106.0
Q ss_pred CeEEEEeCC-CCCHHHHHHH-HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEE
Q 014581 150 KILIASIME-EYNKAAWEEL-IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~~-~~~~~~~~~~-a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
.|+.+|... +.++++..+. ++...+.|+..+-+.++.+... .....++...+.+++||+.+ +++|.+..
T Consensus 134 v~~y~s~~~~~~~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~-------d~~~~~~~~~~~v~avReavG~d~~l~vDa 206 (388)
T 3tcs_A 134 IRAYASSMKRDITPRDEAERLKRLRDTQGFTAFKVRAGAEVGR-------NRDEWPGRTEEIIPTMRRELGDDVDLLIDA 206 (388)
T ss_dssp EEEEEECCCSSSCHHHHHHHHHHHHHHHCCCEEEEECSCTTCT-------TCCSSTTHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred eEEEEecCcCCCChHHHHHHHHHHHHhcCCCEEEEccCCCccc-------ccccchhHHHHHHHHHHHHhCCCCeEEEeC
Confidence 355556532 2356554443 3444467999999998765421 11123455667888898875 78999998
Q ss_pred CCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 226 TPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 226 ~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
+..++ +..++++.+.+.|+..|. +|.+ +..++..+++++.+
T Consensus 207 N~~~~~~~A~~~~~~l~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~---- 249 (388)
T 3tcs_A 207 NSCYTPDRAIEVGHMLQDHGFCHFE----------------EPCP-----------------YWELAQTKQVTDAL---- 249 (388)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEE----------------CCSC-----------------TTCHHHHHHHHHHC----
T ss_pred CCCcCHHHHHHHHHHHhhcCCeEEE----------------CCCC-----------------ccCHHHHHHHHHhc----
Confidence 77665 346678888888887662 2321 11234456677765
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+.+|..
T Consensus 250 ---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~-GGit~a~ki----a~~A~~~gv~ 303 (388)
T 3tcs_A 250 ---DIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYL-GGICRTLRV----VEMARAAGLP 303 (388)
T ss_dssp ---SSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHH-TSHHHHHHH----HHHHHHTTCC
T ss_pred ---CCCEEcCCccCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 78888765443 334434443 3445666664
No 309
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.70 E-value=0.045 Score=52.76 Aligned_cols=202 Identities=12% Similarity=0.089 Sum_probs=115.8
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc-------CCCCCCCccccccccccChhHHH
Q 014581 135 TMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF-------SCPHGMPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~-------scP~~~~~~~~G~~l~~~~~~v~ 207 (422)
.-.+.++++++. +.|+.+ +. .++.- .|+.++++|+|+|=+.= +.|.+. .-..+.+.
T Consensus 16 ~~a~~lr~l~~~--~~~i~~-~~-ayD~~----sA~l~e~aG~dai~vs~~s~a~~~G~pD~~---------~vt~~em~ 78 (305)
T 3ih1_A 16 ELANRFRALVEA--NEILQI-PG-AHDAM----AALVARNTGFLALYLSGAAYTASKGLPDLG---------IVTSTEVA 78 (305)
T ss_dssp HHHHHHHHHHHS--SSCEEE-EB-CSSHH----HHHHHHHTTCSCEEECHHHHHHHHTCCSSS---------CSCHHHHH
T ss_pred HHHHHHHHHHhC--CCcEEE-ec-CcCHH----HHHHHHHcCCCEEEECcHHHHHhCCCCCCC---------cCCHHHHH
Confidence 334456666653 344332 22 34432 45677889999998752 222210 12334455
Q ss_pred HHHHHHhhccCccEEEEECCCCCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 208 EVCGWINAKATVPVWAKMTPNITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
..++.|.+.+++||++=+.-.+.+ ..+.++.+.++|+++|.+=+.... + ..|-+.|+.+
T Consensus 79 ~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~------k------------rcGh~~gk~l 140 (305)
T 3ih1_A 79 ERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLP------K------------KCGHLNGKKL 140 (305)
T ss_dssp HHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSS------C------------CTTCTTCCCB
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCC------c------------ccCCCCCCcc
Confidence 556666666789999988766554 455677889999999987764321 0 1133345666
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCC-------CHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE-------TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~-------s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~ 357 (422)
.|.. +.+.+|+.+.... .++.|+|=..-. .-+++..+..+|||+|.+=.. .. +..++++.+.+..-
T Consensus 141 ~~~~-e~~~rI~Aa~~A~---~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~--~~-~~~~~~i~~~~~~P 213 (305)
T 3ih1_A 141 VTTE-ELVQKIKAIKEVA---PSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL--QS-EEEFRLFNSKVNAP 213 (305)
T ss_dssp CCHH-HHHHHHHHHHHHC---TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC--CS-HHHHHHHHHHSCSC
T ss_pred cCHH-HHHHHHHHHHHcC---CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC--CC-HHHHHHHHHHcCCC
Confidence 6665 3455555554321 256666655432 225566677899999998543 22 56777777776421
Q ss_pred H----HHcC---CCCHHHhhcCCcccCC
Q 014581 358 M----KMHN---FSSIEDFRGASIEYFT 378 (422)
Q Consensus 358 m----~~~G---~~si~d~~G~~~~~~~ 378 (422)
+ -..| .-+.+|+.......+.
T Consensus 214 ~~~n~~~~g~tp~~~~~eL~~lGv~~v~ 241 (305)
T 3ih1_A 214 LLANMTEFGKTPYYSAEEFANMGFQMVI 241 (305)
T ss_dssp BEEECCTTSSSCCCCHHHHHHTTCSEEE
T ss_pred EEEeecCCCCCCCCCHHHHHHcCCCEEE
Confidence 1 1112 3456777655444444
No 310
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.69 E-value=0.06 Score=51.16 Aligned_cols=145 Identities=14% Similarity=0.217 Sum_probs=82.7
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.||.+-.. .++-..+.+.++|+-++-++.-.. ...+|+++.+.+ ++++++
T Consensus 34 ~~i~~~ta---yDa~sA~l~e~aG~d~ilvGdSl~------------------------~~~lG~~dt~~v---Tldemi 83 (281)
T 1oy0_A 34 HKWAMLTA---YDYSTARIFDEAGIPVLLVGDSAA------------------------NVVYGYDTTVPI---SIDELI 83 (281)
T ss_dssp CCEEEEEC---CSHHHHHHHHTTTCCEEEECTTHH------------------------HHTTCCSSSSSC---CGGGTH
T ss_pred CcEEEEeC---cCHHHHHHHHHcCCCEEEECHHHH------------------------HHHcCCCCCCCC---CHHHHH
Confidence 46654443 457777777788999886652110 112344444322 267777
Q ss_pred HHHHHHHhhCCCCeEEEEeCC-CC--CHHHHHH-HHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 138 KEFKQLKALYPDKILIASIME-EY--NKAAWEE-LIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si~~-~~--~~~~~~~-~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
...+.+.+..+..+|++-+.. ++ ++++..+ +.+.++++|+++|-|-=+ +...+.++++
T Consensus 84 ~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg------------------~e~~~~I~al 145 (281)
T 1oy0_A 84 PLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGG------------------ERVAEQIACL 145 (281)
T ss_dssp HHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBS------------------GGGHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCc------------------HHHHHHHHHH
Confidence 777777765533445555532 33 5666555 455666699999977521 1123344444
Q ss_pred hhccCccEEE--EECCC-------C---------CChHHHHHHHHHcCCCEEEEec
Q 014581 214 NAKATVPVWA--KMTPN-------I---------TDITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 214 r~~~~iPv~v--Kl~~~-------~---------~~~~~~a~~l~~aGadgi~v~n 251 (422)
.+. .+||+. -|+|. + .+..+-|++++++||++|++-.
T Consensus 146 ~~a-gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 146 TAA-GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp HHH-TCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred HHC-CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 443 789872 22221 1 1244567788999999997654
No 311
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.68 E-value=0.013 Score=54.05 Aligned_cols=133 Identities=13% Similarity=0.040 Sum_probs=82.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
..++.||.. .+...+.+.++.+.+.|+|.+++.+- .|+. . ..+ ++++.+++.++.|+.|-+
T Consensus 7 ~~i~psi~a-~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~----~------~~~----~~~~~lr~~~~~~~~v~l 71 (228)
T 1h1y_A 7 AKIAPSMLS-SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNL----T------IGA----PVIQSLRKHTKAYLDCHL 71 (228)
T ss_dssp CEEEEBGGG-SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB----C------BCH----HHHHHHHTTCCSEEEEEE
T ss_pred CeEEEEeee-CCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcch----h------hCH----HHHHHHHhhcCCcEEEEE
Confidence 357778874 45667777888888899999999852 2221 1 112 456667776666776443
Q ss_pred CCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH-HHHHHHHHHHhhccCC
Q 014581 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA-LGKVMSIAKMMKSEFN 304 (422)
Q Consensus 226 ~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a-l~~v~~i~~~~~~~~~ 304 (422)
-. .+..+.++.+.++|+|+|+++.... +.. .+.++.+++.
T Consensus 72 mv--~d~~~~i~~~~~agad~v~vH~~~~-------------------------------~~~~~~~~~~i~~~------ 112 (228)
T 1h1y_A 72 MV--TNPSDYVEPLAKAGASGFTFHIEVS-------------------------------RDNWQELIQSIKAK------ 112 (228)
T ss_dssp ES--SCGGGGHHHHHHHTCSEEEEEGGGC-------------------------------TTTHHHHHHHHHHT------
T ss_pred Ee--cCHHHHHHHHHHcCCCEEEECCCCc-------------------------------ccHHHHHHHHHHHc------
Confidence 32 2445567888889999999885211 111 2344445442
Q ss_pred CCCceEEEecCCCCHHHHHHHHHh---CCCEEEEhhH
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILL---GANTVQVCTG 338 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~a---GAd~V~vgta 338 (422)
++.++..=.-.++.+..+.+.. ++|.|.+.+.
T Consensus 113 --g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 113 --GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp --TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred --CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 4444444444566666666655 9999999553
No 312
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=96.67 E-value=0.079 Score=48.83 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=34.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 307 DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
+++|+..|||.+.+|+..+...|+|++-||++++..
T Consensus 176 ~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 176 EVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred CCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 789999999999999999999999999999999985
No 313
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=96.67 E-value=0.021 Score=56.56 Aligned_cols=153 Identities=9% Similarity=0.033 Sum_probs=102.3
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+..++. ..+++++.+.++.+.+.|+..+-+.+++ +++.-.+.+++||+.+ +.++.+..+..
T Consensus 131 ~~~~~~~-~~~~e~~~~~a~~~~~~G~~~~K~KvG~---------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVS-IDEPHKMAADAVQIKKNGFEIIKVKVGG---------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEEC-SCCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEec-CCCHHHHHHHHHHHHHcCCCeEEEEecC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4555664 3578888888887777899999998753 2233446677777765 78999987765
Q ss_pred CC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 229 IT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 229 ~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
++ +..++++.+.+.|++.|. +|.+ +..++..+++++..
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~~~~~~~~l~~~~------- 234 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE----------------EPVS-----------------RNLYTALPKIRQAC------- 234 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE----------------CCBC-----------------GGGGGGHHHHHHTC-------
T ss_pred CChHHHHHHHHHHhhcCCCEEE----------------CCCC-----------------hhHHHHHHHHHhhC-------
Confidence 54 245677888888877662 1221 11122334566654
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 307 DYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+.+|+.+++..| +|.||+--... .|..-..++ .++.+++|+.
T Consensus 235 ~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i----~~~A~~~gi~ 288 (368)
T 3q45_A 235 RIPIMADESCCNSFDAERLIQIQACDSFNLKLSKS-AGITNALNI----IRLAEQAHMP 288 (368)
T ss_dssp SSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTT-TSHHHHHHH----HHHHHHTTCC
T ss_pred CCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhc-CCHHHHHHH----HHHHHHcCCc
Confidence 79999999999999999999865 79999875543 234433333 3445566664
No 314
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.66 E-value=0.045 Score=50.78 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=29.2
Q ss_pred CceEEEecCCCCHHH----------HHHHHHhCCCEEEEhhHHHhh
Q 014581 307 DYSLSGIGGVETGGD----------AAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 307 ~ipIIa~GGI~s~~d----------a~~~l~aGAd~V~vgtall~~ 342 (422)
+.+|+..|||.-... ..+++.+|||.+.+||+++..
T Consensus 175 ~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a 220 (239)
T 1dbt_A 175 PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKA 220 (239)
T ss_dssp TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCC
Confidence 468999999974332 277889999999999999974
No 315
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=96.63 E-value=0.061 Score=53.55 Aligned_cols=157 Identities=13% Similarity=-0.008 Sum_probs=102.2
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
..|+.+++. ..+++++.+.++.+.+.|+..+-+.++++... .+++.-.+.+++||+.+ +++|.+..+
T Consensus 134 ~v~~y~s~~-~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~----------~~~~~d~~~v~avR~a~G~~~~L~vDaN 202 (386)
T 3fv9_G 134 PVPVISSIG-GDTPEAMRAKVARHRAQGFKGHSIKIGASEAE----------GGPALDAERITACLADRQPGEWYLADAN 202 (386)
T ss_dssp CBCEEEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTT----------THHHHHHHHHHHHTTTCCTTCEEEEECT
T ss_pred ceeeeEecC-CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCC----------CCHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 368888886 56888888888888788999999999876321 22444556788898876 689999987
Q ss_pred CCCCC--hHHHHHHH-HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 227 PNITD--ITEPARVA-LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 227 ~~~~~--~~~~a~~l-~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
..++- ..++++.+ .+.++ .| | +|.+ .++..+++++..
T Consensus 203 ~~~~~~~A~~~~~~l~~~~~i-~i--------------E--eP~~-------------------~~~~~~~l~~~~---- 242 (386)
T 3fv9_G 203 NGLTVEHALRMLSLLPPGLDI-VL--------------E--APCA-------------------SWAETKSLRARC---- 242 (386)
T ss_dssp TCCCHHHHHHHHHHSCSSCCC-EE--------------E--CCCS-------------------SHHHHHHHHTTC----
T ss_pred CCCCHHHHHHHHHHhhccCCc-EE--------------e--cCCC-------------------CHHHHHHHHhhC----
Confidence 76641 22333333 22222 22 1 2221 123344555543
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||.+...+.+..|+.+++..| +|.||+--... .|..-..++ ..+.+.+|+.
T Consensus 243 ---~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGit~~~~i----~~~A~~~gi~ 296 (386)
T 3fv9_G 243 ---ALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQ-GGITPMLRQ----RAIAAAAGMV 296 (386)
T ss_dssp ---CSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred ---CCCEEeCCCcCCHHHHHHHHHhCCCCEEEECcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 88999875544 234333333 2344555553
No 316
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=96.63 E-value=0.048 Score=54.43 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=102.7
Q ss_pred CeEEEEeCC---CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEE-E
Q 014581 150 KILIASIME---EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVW-A 223 (422)
Q Consensus 150 ~pvi~si~~---~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~-v 223 (422)
.|+..++.. ..+++++.+.++.+.+.|+..+.+++++ +++.-.+.+++||+.+ +.+|. +
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~---------------~~~~d~~~v~avR~a~g~~~~l~~v 192 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK---------------NLDADEEFLSRVKEEFGSRVRIKSY 192 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS---------------CHHHHHHHHHHHHHHHGGGCEEEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC---------------CHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 466677741 2467888888888877899999999864 1233456677777765 67899 9
Q ss_pred EECCCCC--ChHHHHHHHHHcCC--CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 224 KMTPNIT--DITEPARVALRSGS--EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 224 Kl~~~~~--~~~~~a~~l~~aGa--dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
..+..++ +..++++.+.+.|+ +.|. +|.+ +..++..+++++.+
T Consensus 193 Dan~~~~~~~A~~~~~~l~~~~i~~~~iE----------------qP~~-----------------~~d~~~~~~l~~~~ 239 (391)
T 3gd6_A 193 DFSHLLNWKDAHRAIKRLTKYDLGLEMIE----------------SPAP-----------------RNDFDGLYQLRLKT 239 (391)
T ss_dssp ECTTCSCHHHHHHHHHHHTTCCSSCCEEE----------------CCSC-----------------TTCHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHhcCCCcceec----------------CCCC-----------------hhhHHHHHHHHHHc
Confidence 8776554 24567778888887 5552 2221 11234556677765
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++|| ...+.+.+|+.+++..| +|.||+--.-.- |..-..++. .+.+++|+.
T Consensus 240 -------~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G-Git~~~~ia----~~A~~~gi~ 291 (391)
T 3gd6_A 240 -------DYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIG-GLTSAKKAA----YAAEVASKD 291 (391)
T ss_dssp -------SSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHT-SHHHHHHHH----HHHHHTTCE
T ss_pred -------CCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcC-CHHHHHHHH----HHHHHcCCE
Confidence 7999 88899999999999876 799998866542 344344433 344556653
No 317
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=96.61 E-value=0.047 Score=54.82 Aligned_cols=156 Identities=14% Similarity=0.047 Sum_probs=101.9
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccc--cc------ccccC---hhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM--GA------AVGQD---CRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~--G~------~l~~~---~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
+++++.+.++.+.+.|+..+-+.+..+.......+ |. ....+ .+...+++++||+.+ +.+|.|..+.
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 67888888888888899999998732221100111 10 00011 234557788888875 7899999876
Q ss_pred CCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 228 NIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.++ +..++++.+.+.|++.|.. |. . .++..+++++.+
T Consensus 223 ~~~~~~A~~~~~~L~~~~i~~iE~----------------P~---------~----------d~~~~~~l~~~~------ 261 (409)
T 3go2_A 223 NAKPEGYLKILRELADFDLFWVEI----------------DS---------Y----------SPQGLAYVRNHS------ 261 (409)
T ss_dssp CSCHHHHHHHHHHTTTSCCSEEEC----------------CC---------S----------CHHHHHHHHHTC------
T ss_pred CCCHHHHHHHHHHHhhcCCeEEEe----------------Cc---------C----------CHHHHHHHHhhC------
Confidence 654 2456777787888877741 10 0 123445666654
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.+.+.+.+++.+++..| +|.||+=-.- .|..-..++. .+.+.+|+.
T Consensus 262 -~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~--GGit~~~~ia----~~A~~~gi~ 314 (409)
T 3go2_A 262 -PHPISSCETLFGIREFKPFFDANAVDVAIVDTIW--NGVWQSMKIA----AFADAHDIN 314 (409)
T ss_dssp -SSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHH--HCHHHHHHHH----HHHHHTTCE
T ss_pred -CCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCC--CCHHHHHHHH----HHHHHcCCE
Confidence 79999999999999999999987 7999987643 5554444433 344566654
No 318
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.60 E-value=0.045 Score=53.73 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=64.7
Q ss_pred HHHHHHHHHhhCC-CCeEEEEeCC------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHH
Q 014581 136 MLKEFKQLKALYP-DKILIASIME------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208 (422)
Q Consensus 136 ~l~~i~~~k~~~~-~~pvi~si~~------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~ 208 (422)
.++.++.+++..+ +.||.+-+.. +.+.+++.+++++++++ +|+|++..+........ ..+..-.+
T Consensus 196 ~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~-------~~~~~~~~ 267 (343)
T 3kru_A 196 LIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDIN-------LYPGYQVK 267 (343)
T ss_dssp HHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCC-------CCTTTTHH
T ss_pred HHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeec-------ccCceeeh
Confidence 3455667776654 5699987752 34578999999999999 99999843211100000 01111234
Q ss_pred HHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 209 iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
.++.+|+.+++||++ ...+.+ .+.++.+.+.| +|.|.+.
T Consensus 268 ~~~~ir~~~~iPVi~--~Ggi~t-~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 268 YAETIKKRCNIKTSA--VGLITT-QELAEEILSNERADLVALG 307 (343)
T ss_dssp HHHHHHHHHTCEEEE--ESSCCC-HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHhcCcccce--eeeeeH-HHHHHHHHhchhhHHHHHH
Confidence 566677777899986 344444 45666776776 8977543
No 319
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.60 E-value=0.017 Score=57.29 Aligned_cols=131 Identities=18% Similarity=0.193 Sum_probs=83.4
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhC-CCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aG-aD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
+.||+.+=|.+.+.. ++|..+.++| .-.|+.| .+++.+.+.++.+|+....++.+-+..
T Consensus 46 ~~Pii~apM~~vs~~---~lA~avA~aGGlg~i~~~-----------------~s~e~~~~~i~~vk~~~~l~vga~vg~ 105 (366)
T 4fo4_A 46 NIPMVSASMDTVTEA---RLAIALAQEGGIGFIHKN-----------------MSIEQQAAQVHQVKISGGLRVGAAVGA 105 (366)
T ss_dssp SSSEEECCCTTTCSH---HHHHHHHHTTCEEEECSS-----------------SCHHHHHHHHHHHHTTTSCCCEEECCS
T ss_pred CCCEEeCCCCCCChH---HHHHHHHHcCCceEeecC-----------------CCHHHHHHHHHHHHhcCceeEEEEecc
Confidence 568776665433332 4554444444 4444321 245667777888887544555544332
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
+ .+..+.++.+.++|+|.|++. +.. |.+ +..++.|+++++.++ +
T Consensus 106 ~-~~~~~~~~~lieaGvd~I~id-ta~-----------------------G~~-----~~~~~~I~~ik~~~p------~ 149 (366)
T 4fo4_A 106 A-PGNEERVKALVEAGVDVLLID-SSH-----------------------GHS-----EGVLQRIRETRAAYP------H 149 (366)
T ss_dssp C-TTCHHHHHHHHHTTCSEEEEE-CSC-----------------------TTS-----HHHHHHHHHHHHHCT------T
T ss_pred C-hhHHHHHHHHHhCCCCEEEEe-CCC-----------------------CCC-----HHHHHHHHHHHHhcC------C
Confidence 2 245778999999999987653 211 110 233566777877763 6
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 308 YSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++||+ |.+.+.+++.++..+|||+|-+|
T Consensus 150 v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 150 LEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp CEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred CceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 77766 67899999999999999999994
No 320
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.60 E-value=0.27 Score=47.38 Aligned_cols=95 Identities=11% Similarity=0.021 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
.++..+.++.+.+.....||++.++ +.+.++-.+.++.++++|+|++-+ ..|... .+.+.+.+..+.
T Consensus 60 ~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~ai~la~~A~~~Gadavlv--~~P~~~----------~s~~~l~~~f~~ 126 (313)
T 3dz1_A 60 AAEAEAVATRFIKRAKSMQVIVGVS-APGFAAMRRLARLSMDAGAAGVMI--APPPSL----------RTDEQITTYFRQ 126 (313)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHHHHHHHHHHHHTCSEEEE--CCCTTC----------CSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHHHHHHHHHHHcCCCEEEE--CCCCCC----------CCHHHHHHHHHH
Confidence 4555555555555443579999996 567888899999999999999976 244421 235667788888
Q ss_pred HhhccC--ccEEEEECCCC---CChHHHHHHHH
Q 014581 213 INAKAT--VPVWAKMTPNI---TDITEPARVAL 240 (422)
Q Consensus 213 vr~~~~--iPv~vKl~~~~---~~~~~~a~~l~ 240 (422)
|.+.++ +||++--.|.. .-..+...++.
T Consensus 127 va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 127 ATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp HHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred HHHhCCCCCcEEEEeCccccCcCCCHHHHHHHH
Confidence 888887 99999765421 11245555554
No 321
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.60 E-value=0.092 Score=47.81 Aligned_cols=130 Identities=15% Similarity=0.080 Sum_probs=81.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc-cCccE--EEEEC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK-ATVPV--WAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~-~~iPv--~vKl~ 226 (422)
..+++++- -.+.++..++++.+ +.|+|.+|+++ .|+ ..+| + ++++++|+. .+.|+ -+|+-
T Consensus 7 ~~lilalD-~~~~~~~~~~~~~~-~~~vd~ie~g~-~~~----~~~G------~----~~i~~lr~~~~~~~i~ld~~l~ 69 (218)
T 3jr2_A 7 PMIQIALD-QTNLTDAVAVASNV-ASYVDVIEVGT-ILA----FAEG------M----KAVSTLRHNHPNHILVCDMKTT 69 (218)
T ss_dssp CEEEEEEC-CSSHHHHHHHHHHH-GGGCSEEEECH-HHH----HHHT------T----HHHHHHHHHCTTSEEEEEEEEC
T ss_pred CCeEEEeC-CCCHHHHHHHHHHh-cCCceEEEeCc-HHH----HhcC------H----HHHHHHHHhCCCCcEEEEEeec
Confidence 35788884 35677878888876 45899999985 111 1111 2 356666665 34454 56775
Q ss_pred CCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 227 ~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
+ .....++.+.++|+|+++++..... ....+.++.+++.
T Consensus 70 -d--~p~~~~~~~~~aGad~i~vh~~~~~------------------------------~~~~~~~~~~~~~-------- 108 (218)
T 3jr2_A 70 -D--GGAILSRMAFEAGADWITVSAAAHI------------------------------ATIAACKKVADEL-------- 108 (218)
T ss_dssp -S--CHHHHHHHHHHHTCSEEEEETTSCH------------------------------HHHHHHHHHHHHH--------
T ss_pred -c--cHHHHHHHHHhcCCCEEEEecCCCH------------------------------HHHHHHHHHHHHh--------
Confidence 2 3455789999999999998864210 0011333334332
Q ss_pred CceEEE-ecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 307 DYSLSG-IGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 307 ~ipIIa-~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
++..+. .=|+.|++++.++...|+|.+.+.+
T Consensus 109 g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 109 NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHR 140 (218)
T ss_dssp TCEEEEECCSSCCHHHHHHHHHTTCCEEEEEC
T ss_pred CCccceeeeecCCHHHHHHHHHcCccceeeee
Confidence 455553 4456788999999889999766543
No 322
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.54 E-value=0.017 Score=55.47 Aligned_cols=87 Identities=18% Similarity=0.158 Sum_probs=60.4
Q ss_pred HHHHHHHhhccC-ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKAT-VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~~-iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+-++.+++... .++.|-. .+. +-++.+.++|+|+|-+.|..
T Consensus 196 ~~ai~~~r~~~~~~kI~vev----~tl-ee~~eA~~aGaD~I~ld~~~-------------------------------- 238 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEVEV----ENL-DELDDALKAGADIIMLDNFN-------------------------------- 238 (296)
T ss_dssp HHHHHHHHHHSTTSCEEEEE----SSH-HHHHHHHHTTCSEEEESSCC--------------------------------
T ss_pred HHHHHHHHHhCCCCcEEEEe----CCH-HHHHHHHHcCCCEEEECCCC--------------------------------
Confidence 444555555442 2566632 233 34666778999999765411
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
++.++++++.+.+ +++|.++||| +.+.+.++..+|+|.+.+|+..
T Consensus 239 ---~e~l~~~v~~~~~-----~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 239 ---TDQMREAVKRVNG-----QARLEVSGNV-TAETLREFAETGVDFISVGALT 283 (296)
T ss_dssp ---HHHHHHHHHTTCT-----TCCEEECCCS-CHHHHHHHHHTTCSEEECSHHH
T ss_pred ---HHHHHHHHHHhCC-----CCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHH
Confidence 2345556665532 6999999999 8999999999999999999955
No 323
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.53 E-value=0.1 Score=50.10 Aligned_cols=182 Identities=15% Similarity=0.208 Sum_probs=105.6
Q ss_pred HHHHHHhCCCEEEEcc-CCC---CCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC---hHHHHHHHHH
Q 014581 169 IDRVEETGIDAIEVNF-SCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD---ITEPARVALR 241 (422)
Q Consensus 169 a~~~~~aGaD~iElN~-scP---~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~ 241 (422)
|+.++++|+|+|=+.= +.- .+.+ +.+ .-..+.+...++.|.+.+++||++=+.-.+.+ ..+.++.+.+
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~p--D~~---~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~ 109 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIP--DLG---ISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIK 109 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCC--SSS---CCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCC--CCC---CCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHH
Confidence 5667788999998742 111 1111 100 12345556666777777799999988766554 4566788899
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCH--
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG-- 319 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~-- 319 (422)
+|+++|.+=+.... + .-|-..|+.+.|.. +.+.+|+.+...+- ..++-|++=-.....
T Consensus 110 aGaagv~iEDq~~~------k------------~cGh~~gk~l~~~~-e~~~ri~Aa~~A~~-~~~~~I~ARTDa~~~~g 169 (298)
T 3eoo_A 110 AGVGAVHLEDQVGQ------K------------RCGHRPGKECVPAG-EMVDRIKAAVDART-DETFVIMARTDAAAAEG 169 (298)
T ss_dssp TTCSEEEEECBCCC------C------------CTTCCCCCCBCCHH-HHHHHHHHHHHHCS-STTSEEEEEECTHHHHH
T ss_pred hCCeEEEECCCCCC------c------------ccCCCCCCeecCHH-HHHHHHHHHHHhcc-CCCeEEEEeehhhhhcC
Confidence 99999987764321 0 11233456666765 34555655443221 125667765544322
Q ss_pred -----HHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHH-----H--HcCCCCHHHhhcCCcccCC
Q 014581 320 -----GDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM-----K--MHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 320 -----~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m-----~--~~G~~si~d~~G~~~~~~~ 378 (422)
+.+..|..+|||+|.+-.. .+ +..++++.+.+..=+ + ....-+.+|+.......+.
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~~--~~-~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~ 237 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEAM--KT-LDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIAL 237 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC--CS-HHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhhHhcCCCEEEeCCC--CC-HHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEE
Confidence 3345566789999998653 23 677888887764111 0 1123356777755454444
No 324
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=96.52 E-value=0.26 Score=47.10 Aligned_cols=167 Identities=14% Similarity=0.173 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
+++.++++++++++. +.|++-.+. ++.. ++.+.+ .+|++.|--. ..++.+.++++
T Consensus 74 l~~gl~~l~~~~~~~-Glp~~te~~---d~~~----~~~l~~-~vd~~kIgA~-------------~~~n~~Ll~~~--- 128 (292)
T 1o60_A 74 MEEGLKIFQELKDTF-GVKIITDVH---EIYQ----CQPVAD-VVDIIQLPAF-------------LARQTDLVEAM--- 128 (292)
T ss_dssp HHHHHHHHHHHHHHH-CCEEEEECC---SGGG----HHHHHT-TCSEEEECGG-------------GTTCHHHHHHH---
T ss_pred HHHHHHHHHHHHHHc-CCcEEEecC---CHHH----HHHHHh-cCCEEEECcc-------------cccCHHHHHHH---
Confidence 577777788776655 889999996 2333 233445 5899987531 12344444443
Q ss_pred HhhccCccEEEEECC--CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 213 INAKATVPVWAKMTP--NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 213 vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
. .+++||++|-.. ++.++...++.+...|-.-+++.-+... . +|.- .-..++
T Consensus 129 -a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~-~--------------------~y~~---~~~dl~ 182 (292)
T 1o60_A 129 -A-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN-F--------------------GYDN---LIVDML 182 (292)
T ss_dssp -H-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE-C--------------------STTC---EECCTT
T ss_pred -H-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-C--------------------CCCc---cccCHH
Confidence 3 249999999764 3456777778888899866666654321 0 0000 001234
Q ss_pred HHHHHHHHhhccCCCCCceEEE-----------ecCCCCH------HHHHHHHHhCCCEEEEhhHHH-----hh-----h
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSG-----------IGGVETG------GDAAEFILLGANTVQVCTGVM-----MH-----G 343 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa-----------~GGI~s~------~da~~~l~aGAd~V~vgtall-----~~-----G 343 (422)
.+..+++... ++||+. +|+-..+ .-+..++.+||++++|=+-+- .+ .
T Consensus 183 ~i~~lk~~~~------~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~ 256 (292)
T 1o60_A 183 GFSVMKKASK------GSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNPNQAKCDGPSALP 256 (292)
T ss_dssp HHHHHHHHTT------SCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESSGGGCSSCCTTCEE
T ss_pred HHHHHHhhCC------CCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCcccCCchhhcCCC
Confidence 5556766542 578888 3344444 344566789999888765431 12 2
Q ss_pred hHHHHHHHHHHHH
Q 014581 344 YGLVKRLCEELKD 356 (422)
Q Consensus 344 p~~i~~i~~~l~~ 356 (422)
|.-++++.++++.
T Consensus 257 p~~l~~lv~~ir~ 269 (292)
T 1o60_A 257 LSALEGFVSQMKA 269 (292)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4557777777664
No 325
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.51 E-value=0.025 Score=53.15 Aligned_cols=75 Identities=21% Similarity=0.167 Sum_probs=59.5
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++|+..+++||++|.+..- +. ..+|. .+.+..+++.+ ++||
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~---------~~-----------~f~G~---------~~~l~~i~~~v-------~lPv 109 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTE---------PH-----------RFGGS---------LLDLKRVREAV-------DLPL 109 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC---------CS-----------SSCCC---------HHHHHHHHHHC-------CSCE
T ss_pred CHHHHHHHHHHcCCCEEEEecc---------hh-----------hhccC---------HHHHHHHHHhc-------CCCE
Confidence 5789999999999999977421 00 01221 35677777765 8999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
..-++|.+..++.+++.+|||+|.++...+.
T Consensus 110 l~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 110 LRKDFVVDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred EECCcCCCHHHHHHHHHcCCCEEEECccchH
Confidence 9999999999999999999999999998774
No 326
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=96.51 E-value=0.11 Score=51.72 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=102.7
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTP 227 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~ 227 (422)
.|+.++++ ..++++..+.++...+.|+..+-+.++. +++.-.+.+++||+.. +.++.+..+.
T Consensus 132 v~~y~t~g-~~~~e~~~~~a~~~~~~Gf~~~KlK~g~---------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 132 IVTDVSIS-CGNVAETIQNIQNGVEANFTAIKVKTGA---------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EEBCEEEC-CCCHHHHHHHHHHHHHTTCCEEEEECSS---------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEEec-CCCHHHHHHHHHHHHHcCCCEEeeecCC---------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 35666775 4578888887877777799999998742 2344456777888876 5899998776
Q ss_pred CCC--ChHHHHHHHHH--cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 228 NIT--DITEPARVALR--SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 228 ~~~--~~~~~a~~l~~--aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
.++ +..++++.+.+ .++..|. +|.+ +..++..+++++..
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iE----------------eP~~-----------------~~d~~~~~~l~~~~---- 238 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIE----------------QPVK-----------------YYDIKAMAEITKFS---- 238 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHC----
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEE----------------CCCC-----------------cccHHHHHHHHhcC----
Confidence 664 24566777777 4544441 2221 11234556677765
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||.+..-+.+..|+.+++..| +|.||+--... .|..-..++ ..+.+++|+.
T Consensus 239 ---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGi~~~~~i----a~~A~~~gi~ 292 (379)
T 3r0u_A 239 ---NIPVVADESVFDAKDAERVIDEQACNMINIKLAKT-GGILEAQKI----KKLADSAGIS 292 (379)
T ss_dssp ---SSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred ---CCCEEeCCccCCHHHHHHHHHcCCCCEEEECcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999987 68999875543 234333333 3345566654
No 327
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.50 E-value=0.025 Score=54.50 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCC-------CCCC-C-c---cccccccc
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSC-------PHGM-P-E---RKMGAAVG 200 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~sc-------P~~~-~-~---~~~G~~l~ 200 (422)
.+...+.++.+++.. +.||++-+..+.+.+++.++++.++++|+|+|.+.-.. +... + . ..+|+.-+
T Consensus 143 ~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg 221 (311)
T 1jub_A 143 FEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG 221 (311)
T ss_dssp HHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc
Confidence 455556677777654 78999988755677888899999999999999875221 0000 0 0 01111101
Q ss_pred c-ChhHHHHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 201 Q-DCRLLEEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 201 ~-~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
. ......+.++.+++.+ ++||+. ..++.+.....+ +.++|||+|.+.
T Consensus 222 ~~~~~~~~~~i~~v~~~~~~~ipvi~--~GGI~~~~da~~-~l~~GAd~V~vg 271 (311)
T 1jub_A 222 AYIKPTALANVRAFYTRLKPEIQIIG--TGGIETGQDAFE-HLLCGATMLQIG 271 (311)
T ss_dssp GGGHHHHHHHHHHHHTTSCTTSEEEE--ESSCCSHHHHHH-HHHHTCSEEEEC
T ss_pred ccccHHHHHHHHHHHHhcCCCCCEEE--ECCCCCHHHHHH-HHHcCCCEEEEc
Confidence 1 1123356788888888 899886 466666555444 447899998655
No 328
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=96.50 E-value=0.1 Score=51.87 Aligned_cols=155 Identities=13% Similarity=0.071 Sum_probs=101.5
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPN 228 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~ 228 (422)
.|+.+++. ..++++..+.++.+.+.|+..+-+.++.. +++.-.+.+++||+.. +++|.+..+..
T Consensus 138 v~~~~t~~-~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~--------------~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 138 IPLSCSIA-NPDFDADIALMERLRADGVGLIKLKTGFR--------------DHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EEBEEEEC-CSSHHHHHHHHHHHHHHTCCEEEEECSSS--------------CHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEEEEcC-CCCHHHHHHHHHHHHHcCCCEEEEecCCC--------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 46677775 34677766666666667999999997532 1222334566666664 77899998766
Q ss_pred CC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 229 IT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 229 ~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
++ +..++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 203 ~~~~~A~~~~~~L~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------- 242 (385)
T 3i6e_A 203 LEIDEAVPRVLDVAQFQPDFIE----------------QPVR-----------------AHHFELMARLRGLT------- 242 (385)
T ss_dssp CCGGGHHHHHHHHHTTCCSCEE----------------CCSC-----------------TTCHHHHHHHHTTC-------
T ss_pred CCHHHHHHHHHHHHhcCCCEEE----------------CCCC-----------------cccHHHHHHHHHhC-------
Confidence 54 356788888888876652 2221 11134445566544
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 307 DYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++..-+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 243 ~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i----~~~A~~~gi~ 296 (385)
T 3i6e_A 243 DVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKS-GGLTRAQTV----ARIAAAHGLM 296 (385)
T ss_dssp SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred CCCEEEeCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 78999875443 234333333 3345566664
No 329
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.48 E-value=0.0093 Score=57.52 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=59.4
Q ss_pred HHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 208 EVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 208 ~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
+-++.+++.. .+++.+=. ... +-++.+.++|+|+|-+.|..
T Consensus 185 ~ai~~~r~~~~~~~~i~vev----~tl-ee~~~A~~aGaD~I~ld~~~-------------------------------- 227 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEVEC----SSL-QEAVQAAEAGADLVLLDNFK-------------------------------- 227 (299)
T ss_dssp HHHHHHHHHHTTTSCEEEEE----SSH-HHHHHHHHTTCSEEEEESCC--------------------------------
T ss_pred HHHHHHHHhCCcCCeEEEec----CCH-HHHHHHHHcCCCEEEECCCC--------------------------------
Confidence 3444555543 24666632 233 34556678999999765411
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
++.++++++.+.+.++ +++|.++||| +.+.+.+++.+|||.+.+|+.+.
T Consensus 228 ---~~~l~~~v~~l~~~~~--~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 228 ---PEELHPTATVLKAQFP--SVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp ---HHHHHHHHHHHHHHCT--TSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHH
T ss_pred ---HHHHHHHHHHhhccCC--CeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhc
Confidence 1234444444433222 6999999999 89999999999999999999664
No 330
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=96.42 E-value=0.26 Score=46.87 Aligned_cols=168 Identities=19% Similarity=0.179 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
+++-++.+++++++. +.|++-.+. +++. ++.+.+. +|.+.|--. ..++.+.++++-
T Consensus 76 ~~~GL~~L~~~~~e~-Glp~~Tev~---d~~~----v~~l~~~-vd~lqIgA~-------------~~~n~~LLr~va-- 131 (285)
T 3sz8_A 76 LDEGLKIFAEVKARF-GVPVITDVH---EAEQ----AAPVAEI-ADVLQVPAF-------------LARQTDLVVAIA-- 131 (285)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEECC---SGGG----HHHHHTT-CSEEEECGG-------------GTTCHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhc-CCeEEEEeC---CHHH----HHHHHHh-CCEEEECcc-------------ccCCHHHHHHHH--
Confidence 677777788887665 889998886 2333 2334455 899987521 124445444433
Q ss_pred HhhccCccEEEEECC--CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 213 INAKATVPVWAKMTP--NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 213 vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
.+++||++|-.. +..++...++.+.+.|-+-|++.-+.... ++.- .-..++
T Consensus 132 ---~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y---------------------~~~~---~~vdl~ 184 (285)
T 3sz8_A 132 ---KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSF---------------------GYDN---LVVDML 184 (285)
T ss_dssp ---HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEEC---------------------SSSC---EECCTT
T ss_pred ---ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCC---------------------CCCc---CccCHH
Confidence 248999999764 34467888889999998888777554210 0100 001245
Q ss_pred HHHHHHHHhhccCCCCCceEEEe---------------cCCCC--HHHHHHHHHhCCCEEEEhhHH-----Hhhh-----
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGI---------------GGVET--GGDAAEFILLGANTVQVCTGV-----MMHG----- 343 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~---------------GGI~s--~~da~~~l~aGAd~V~vgtal-----l~~G----- 343 (422)
.+..+++..+ ++||+.. ||-+. ..-++.++++||+++.|=+-+ +.+|
T Consensus 185 ~i~~lk~~~~------~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~ 258 (285)
T 3sz8_A 185 GFRQMAETTG------GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALP 258 (285)
T ss_dssp HHHHHHHHTT------SCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEE
T ss_pred HHHHHHHhCC------CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccC
Confidence 6666777652 4899873 23221 234567888999966552211 1111
Q ss_pred hHHHHHHHHHHHHH
Q 014581 344 YGLVKRLCEELKDF 357 (422)
Q Consensus 344 p~~i~~i~~~l~~~ 357 (422)
|.-++++.++++..
T Consensus 259 p~el~~lv~~i~~i 272 (285)
T 3sz8_A 259 LHQLEGLLSQMKAI 272 (285)
T ss_dssp GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45567777776543
No 331
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.40 E-value=0.14 Score=45.96 Aligned_cols=129 Identities=18% Similarity=0.178 Sum_probs=80.0
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc-cCccEEE--EECC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK-ATVPVWA--KMTP 227 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~-~~iPv~v--Kl~~ 227 (422)
.+++++- -.+.++..+.++.+. .|+|.||+.+ |+.. ..| + ++++.+|+. .++||.+ |+..
T Consensus 2 ~li~a~D-~~~~~~~~~~~~~~~-~~~diie~G~--p~~~---~~g------~----~~i~~ir~~~~~~~i~~~~~~~~ 64 (211)
T 3f4w_A 2 KLQLALD-ELTLPEAMVFMDKVV-DDVDIIEVGT--PFLI---REG------V----NAIKAIKEKYPHKEVLADAKIMD 64 (211)
T ss_dssp EEEEEEC-SCCHHHHHHHHHHHG-GGCSEEEECH--HHHH---HHT------T----HHHHHHHHHCTTSEEEEEEEECS
T ss_pred cEEEEeC-CCCHHHHHHHHHHhh-cCccEEEeCc--HHHH---hcc------H----HHHHHHHHhCCCCEEEEEEEecc
Confidence 3666663 356778888888886 5899999986 4420 111 2 456677766 5889875 5432
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHH-HHHHHHHHHhhccCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL-GKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al-~~v~~i~~~~~~~~~~~ 306 (422)
....+++.+.++|+|+|+++.... ...+ +.+..+++ .
T Consensus 65 ---~~~~~~~~~~~~Gad~v~v~~~~~-------------------------------~~~~~~~~~~~~~-~------- 102 (211)
T 3f4w_A 65 ---GGHFESQLLFDAGADYVTVLGVTD-------------------------------VLTIQSCIRAAKE-A------- 102 (211)
T ss_dssp ---CHHHHHHHHHHTTCSEEEEETTSC-------------------------------HHHHHHHHHHHHH-H-------
T ss_pred ---chHHHHHHHHhcCCCEEEEeCCCC-------------------------------hhHHHHHHHHHHH-c-------
Confidence 233458999999999998874311 0111 22333333 2
Q ss_pred CceEEE-ecCCCCH-HHHHHHHHhCCCEEEEhhH
Q 014581 307 DYSLSG-IGGVETG-GDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 307 ~ipIIa-~GGI~s~-~da~~~l~aGAd~V~vgta 338 (422)
+++++. .=+..++ +.+.++..+|+|.|.+..+
T Consensus 103 g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 103 GKQVVVDMICVDDLPARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECC
T ss_pred CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 455554 2456666 5577888899999887543
No 332
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.40 E-value=0.082 Score=54.68 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=84.6
Q ss_pred CceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHH
Q 014581 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLK 138 (422)
Q Consensus 59 Pi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~ 138 (422)
+++++-|......+.++++.++|+-++++-+... . .+.+++
T Consensus 246 ~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g---------------------------------~------~~~v~~ 286 (511)
T 3usb_A 246 LVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG---------------------------------H------SQGVID 286 (511)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT---------------------------------T------SHHHHH
T ss_pred eeeeeeeeccchHHHHHHHHhhccceEEeccccc---------------------------------c------hhhhhh
Confidence 3344444443446778888999999888754210 0 133455
Q ss_pred HHHHHHhhCCCCeEEE-EeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-Ccc---ccccccccChhHHHHHHHHH
Q 014581 139 EFKQLKALYPDKILIA-SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM-PER---KMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~-si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~-~~~---~~G~~l~~~~~~v~~iv~~v 213 (422)
.++++++.+|+.|+++ ++. +.+ .++.+.++|+|+|.+..+ |-+. ..+ ++| ..+...+.++.+.+
T Consensus 287 ~i~~i~~~~~~~~vi~g~v~---t~e----~a~~~~~aGad~i~vg~g-~gsi~~~~~~~g~g---~p~~~~l~~v~~~~ 355 (511)
T 3usb_A 287 KVKEVRAKYPSLNIIAGNVA---TAE----ATKALIEAGANVVKVGIG-PGSICTTRVVAGVG---VPQLTAVYDCATEA 355 (511)
T ss_dssp HHHHHHHHCTTSEEEEEEEC---SHH----HHHHHHHHTCSEEEECSS-CSTTCCHHHHHCCC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCceEEeeeec---cHH----HHHHHHHhCCCEEEECCC-CccccccccccCCC---CCcHHHHHHHHHHH
Confidence 6777888787888886 663 343 367777889999998542 1110 001 111 12234455555544
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCC
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 253 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~ 253 (422)
++ .++||++= +.+.+...+++ +.++||+++.+...+
T Consensus 356 ~~-~~iPVIa~--GGI~~~~di~k-ala~GA~~V~vGs~~ 391 (511)
T 3usb_A 356 RK-HGIPVIAD--GGIKYSGDMVK-ALAAGAHVVMLGSMF 391 (511)
T ss_dssp HT-TTCCEEEE--SCCCSHHHHHH-HHHTTCSEEEESTTT
T ss_pred Hh-CCCcEEEe--CCCCCHHHHHH-HHHhCchhheecHHH
Confidence 43 37999973 55656665554 457899999876654
No 333
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.39 E-value=0.074 Score=53.21 Aligned_cols=152 Identities=11% Similarity=0.054 Sum_probs=101.9
Q ss_pred CeEEEEeCCCCC--HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEE
Q 014581 150 KILIASIMEEYN--KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~~~~~--~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
.|+.++++...+ ++++.+.++.+.+.|+..+.++++ |. .+. +.+++||+.+ +++|.|..
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~~------------~d~----~~v~avR~a~G~~~~L~vDa 212 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-PG------------WDV----EPLQETRRAVGDHFPLWTDA 212 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-TT------------BSH----HHHHHHHHHHCTTSCEEEEC
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-cc------------hHH----HHHHHHHHhcCCCCEEEEeC
Confidence 466677742235 888888888877789999999973 21 233 3455666654 68999987
Q ss_pred CCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 226 TPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 226 ~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
+..++ + .++++.+.+.|++.|. +|.+ |..++..+++++..
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~---- 254 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHE----------------QPLH-----------------YEALLDLKELGERI---- 254 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEE----------------SCSC-----------------TTCHHHHHHHHHHS----
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEe----------------CCCC-----------------hhhHHHHHHHHhhC----
Confidence 76554 4 6778888888876552 2221 11234455677765
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++...+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+.+|+.
T Consensus 255 ---~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i----a~~A~~~gi~ 308 (400)
T 3mwc_A 255 ---ETPICLDESLISSRVAEFVAKLGISNIWNIKIQRV-GGLLEAIKI----YKIATDNGIK 308 (400)
T ss_dssp ---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCE
T ss_pred ---CCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhh-CCHHHHHHH----HHHHHHcCCE
Confidence 79999999999999999999876 78999875543 234333333 3345566664
No 334
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.37 E-value=0.28 Score=47.37 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ . +.++-.+.++.++++|+|++-+- .|... ..+.+.+.+..+
T Consensus 64 ~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~s~~~l~~~f~ 130 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATSTAIELGNAAKAAGADAVMIH--MPIHP---------YVTAGGVYAYFR 130 (316)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHHHHHHHHHHTCSEEEEC--CCCCS---------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCHHHHHHHHH
Confidence 455555555444432 2579999996 4 78888999999999999999763 45431 124567888888
Q ss_pred HHhhccCccEEEEE
Q 014581 212 WINAKATVPVWAKM 225 (422)
Q Consensus 212 ~vr~~~~iPv~vKl 225 (422)
.|.+.+++||++--
T Consensus 131 ~va~a~~lPiilYn 144 (316)
T 3e96_A 131 DIIEALDFPSLVYF 144 (316)
T ss_dssp HHHHHHTSCEEEEE
T ss_pred HHHHhCCCCEEEEe
Confidence 88888899999875
No 335
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=96.33 E-value=0.27 Score=48.18 Aligned_cols=67 Identities=12% Similarity=-0.035 Sum_probs=52.5
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHHHHHhh-ccCccEEEEEC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVCGWINA-KATVPVWAKMT 226 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv~~vr~-~~~iPv~vKl~ 226 (422)
..||++.++ +.+.++-.+.++.++++|+|++-+- .|... . .+.+.+.+..+.|.+ .+++||++--.
T Consensus 92 rvpViaGvg-~~st~eai~la~~A~~~Gadavlv~--~P~y~---------~~~s~~~l~~~f~~IA~aa~~lPiilYn~ 159 (344)
T 2hmc_A 92 GIPVIVGTG-AVNTASAVAHAVHAQKVGAKGLMVI--PRVLS---------RGSVIAAQKAHFKAILSAAPEIPAVIYNS 159 (344)
T ss_dssp TCCEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEC--CCCSS---------STTCHHHHHHHHHHHHHHSTTSCEEEEEB
T ss_pred CCcEEEecC-CCCHHHHHHHHHHHHhcCCCEEEEC--CCccC---------CCCCHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 579999996 5677888999999999999998764 34421 1 234667888888888 88999999877
Q ss_pred C
Q 014581 227 P 227 (422)
Q Consensus 227 ~ 227 (422)
|
T Consensus 160 P 160 (344)
T 2hmc_A 160 P 160 (344)
T ss_dssp G
T ss_pred C
Confidence 7
No 336
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=96.33 E-value=0.015 Score=58.82 Aligned_cols=166 Identities=11% Similarity=0.069 Sum_probs=101.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccc----cc------------------ccChhHHH
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA----AV------------------GQDCRLLE 207 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~----~l------------------~~~~~~v~ 207 (422)
.|+.++.. +.++++..+.++...+.|+..+-+.++.|.... .+|. .+ ....+...
T Consensus 139 v~~y~~~~-~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (426)
T 4e4f_A 139 VMVYCHTT-GHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMET--TYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTP 215 (426)
T ss_dssp EEEEEEEC-CSSHHHHHHHHHHHHHTTCSEEEECC---------------------CCSEESSSCCEEEECHHHHHHHHH
T ss_pred eeEeEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeccCCcccc--ccccccccccccccccccccccccccchhHHHHHHH
Confidence 46777765 567777777766666779999999987654210 0000 00 00112345
Q ss_pred HHHHHHhhcc--CccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCC
Q 014581 208 EVCGWINAKA--TVPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283 (422)
Q Consensus 208 ~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~ 283 (422)
+++++||+.+ +.+|.+..+..++ +..++++.+.+.|++.|. +|.+. ..
T Consensus 216 e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE----------------eP~~~-------~d----- 267 (426)
T 4e4f_A 216 KLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME----------------DPTPA-------EN----- 267 (426)
T ss_dssp HHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE----------------CCSCC-------SS-----
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE----------------CCCCh-------HH-----
Confidence 7888898876 7899999876654 345677778888887762 12211 11
Q ss_pred cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcC
Q 014581 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362 (422)
Q Consensus 284 i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G 362 (422)
++..+++++.+ ++||++.+.+.+.+++.+++..| +|.||+--.-. .|..-..++. .+.+.+|
T Consensus 268 -----~~~~~~l~~~~-------~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~-GGit~~~~ia----~~A~~~g 330 (426)
T 4e4f_A 268 -----QACFRLIRQHT-------VTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHA-GGITGMRRIA----DFASLYQ 330 (426)
T ss_dssp -----GGGGHHHHTTC-------CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT-THHHHHHHHH----HHHHTTT
T ss_pred -----HHHHHHHHhcC-------CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHHH----HHHHHcC
Confidence 12223456554 79999999999999999999987 68998764433 2343333333 3344555
Q ss_pred C
Q 014581 363 F 363 (422)
Q Consensus 363 ~ 363 (422)
+
T Consensus 331 i 331 (426)
T 4e4f_A 331 V 331 (426)
T ss_dssp C
T ss_pred C
Confidence 4
No 337
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=96.32 E-value=0.45 Score=45.18 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv~ 211 (422)
.++..+.++.+.+...+ |++.++ +.+.++-.+.++.++++|+|++-+- .|... . .+.+.+.+..+
T Consensus 50 ~~Er~~v~~~~~~~~~g--vi~Gvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~s~~~l~~~f~ 115 (286)
T 2r91_A 50 LQEKMELTDAATSAARR--VIVQVA-SLNADEAIALAKYAESRGAEAVASL--PPYYF---------PRLSERQIAKYFR 115 (286)
T ss_dssp HHHHHHHHHHHHHHCSS--EEEECC-CSSHHHHHHHHHHHHHTTCSEEEEC--CSCSS---------TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--EEEeeC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCcCC---------CCCCHHHHHHHHH
Confidence 56666667766665534 888996 5677888999999999999998764 34421 1 24567788888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+++++||++--.|
T Consensus 116 ~va~a~~lPiilYn~P 131 (286)
T 2r91_A 116 DLCSAVSIPVFLYNYP 131 (286)
T ss_dssp HHHHHCSSCEEEEECH
T ss_pred HHHHhcCCCEEEEeCh
Confidence 8888889999997654
No 338
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.31 E-value=0.17 Score=47.31 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=95.0
Q ss_pred HHHHHhhCCCCeEEEEeCC-----CCCHHHHHHH---HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 140 FKQLKALYPDKILIASIME-----EYNKAAWEEL---IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~-----~~~~~~~~~~---a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
++.+++.. +.||.+=|.. .|+.+++..+ ++.+.+.|+|+|.+.+..|.. .-|.+.++++++
T Consensus 43 i~~~~~~~-~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg----------~iD~~~~~~Li~ 111 (256)
T 1twd_A 43 LKSVRQRV-TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG----------NVDMPRMEKIMA 111 (256)
T ss_dssp HHHHHHHC-CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS----------SBCHHHHHHHHH
T ss_pred HHHHHHHc-CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC----------CcCHHHHHHHHH
Confidence 33444444 7898887752 3677776654 456678899999998776653 146677888886
Q ss_pred HHhhccCccEEEEECCC-CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 212 WINAKATVPVWAKMTPN-ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~-~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
+.. ..|+..=-.-+ ..|..+..+.+.+.|++.|.-++.... . ...+.
T Consensus 112 ~a~---~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~-------------------a----------~~g~~ 159 (256)
T 1twd_A 112 AAG---PLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSD-------------------A----------LQGLS 159 (256)
T ss_dssp HHT---TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSS-------------------T----------TTTHH
T ss_pred HhC---CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-------------------H----------HHHHH
Confidence 653 45654322211 235677788899999999864432110 0 11134
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
.++++.+.. . ++.|++.|||+ .+.+.+.+.+|++.+-.+.
T Consensus 160 ~L~~Lv~~a-----~-~i~Im~GgGv~-~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 160 KIMELIAHR-----D-APIIMAGAGVR-AENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp HHHHHHTSS-----S-CCEEEEESSCC-TTTHHHHHHHTCSEEEECC
T ss_pred HHHHHHHhh-----C-CcEEEecCCcC-HHHHHHHHHcCCCeEeECC
Confidence 555554432 1 68899999996 6777777789999888663
No 339
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=96.31 E-value=0.043 Score=54.33 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=96.0
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
|+..+++...+++++.+.++++.+.|++.+.++++ | ..+.+ .+++||+.. ++++.+..+..+
T Consensus 138 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~------------~~d~~----~v~avr~a~~~~~l~vDan~~~ 200 (375)
T 1r0m_A 138 EVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK-P------------GWDVQ----PVRATREAFPDIRLTVDANSAY 200 (375)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T------------TBSHH----HHHHHHHHCTTSCEEEECTTCC
T ss_pred eeeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC-h------------HHHHH----HHHHHHHHcCCCeEEEeCCCCC
Confidence 44445532137888888888888889999999873 2 12333 345555544 788999876544
Q ss_pred C--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 230 T--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 230 ~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
+ + .++++.+.+.|++.|. +|.+ |..++..+++++.. +
T Consensus 201 ~~~~-~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~-------~ 239 (375)
T 1r0m_A 201 TLAD-AGRLRQLDEYDLTYIE----------------QPLA-----------------WDDLVDHAELARRI-------R 239 (375)
T ss_dssp CGGG-HHHHHTTGGGCCSCEE----------------CCSC-----------------TTCSHHHHHHHHHC-------S
T ss_pred CHHH-HHHHHHHHhCCCcEEE----------------CCCC-----------------cccHHHHHHHHHhC-------C
Confidence 3 5 6677777777776552 2221 11123345566665 7
Q ss_pred ceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 308 YSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+||++...+.+.+|+.+++..| +|.|++=-.-. .|..-..++ .++.+++|+.
T Consensus 240 ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 292 (375)
T 1r0m_A 240 TPLCLDESVASASDARKALALGAGGVINLKVARV-GGHAESRRV----HDVAQSFGAP 292 (375)
T ss_dssp SCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTT-TSHHHHHHH----HHHHHHTTCC
T ss_pred CCEEecCccCCHHHHHHHHHhCCCCEEEECcchh-cCHHHHHHH----HHHHHHcCCc
Confidence 9999999999999999999877 89999843222 233322332 3455667764
No 340
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=96.28 E-value=0.048 Score=53.76 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=96.2
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
|+..+++...+++++.+.++++.+.|++.+.++++ | ..+.+ .+++||+.. ++++.+..+..+
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~------------~~d~~----~v~avr~a~~~~~l~vDan~~~ 193 (369)
T 2zc8_A 131 EVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK-P------------GWDYE----VLKAVREAFPEATLTADANSAY 193 (369)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T------------TBSHH----HHHHHHHHCTTSCEEEECTTCC
T ss_pred eceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC-h------------hHHHH----HHHHHHHHcCCCeEEEecCCCC
Confidence 34345532137888888888887889999999873 2 12333 345555544 678998876544
Q ss_pred --CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 230 --TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 230 --~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
.+ .++++.+.+.|++.|. +|.+ |..++..+++++.. +
T Consensus 194 ~~~~-~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~-------~ 232 (369)
T 2zc8_A 194 SLAN-LAQLKRLDELRLDYIE----------------QPLA-----------------YDDLLDHAKLQREL-------S 232 (369)
T ss_dssp CGGG-HHHHHGGGGGCCSCEE----------------CCSC-----------------TTCSHHHHHHHHHC-------S
T ss_pred CHHH-HHHHHHHHhCCCcEEE----------------CCCC-----------------cccHHHHHHHHhhC-------C
Confidence 35 6677777777766552 2221 11123345566665 7
Q ss_pred ceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 308 YSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+||++...+.+.+|+.+++..| +|.|++=-.-. .|..-..++ .++.+++|+.
T Consensus 233 ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 285 (369)
T 2zc8_A 233 TPICLDESLTGAEKARKAIELGAGRVFNVKPARL-GGHGESLRV----HALAESAGIP 285 (369)
T ss_dssp SCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCC
T ss_pred CCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhh-CCHHHHHHH----HHHHHHcCCc
Confidence 9999999999999999999987 89999843322 233323333 3455677764
No 341
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=96.25 E-value=0.51 Score=45.01 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv~ 211 (422)
.++..+.++.+.+...+ |++.++ +.+.++-.+.++.++++|+|++-+- .|... . .+.+.+.+..+
T Consensus 51 ~eEr~~v~~~~~~~~~g--viaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~s~~~l~~~f~ 116 (293)
T 1w3i_A 51 PEEKLENLKAVYDVTNK--IIFQVG-GLNLDDAIRLAKLSKDFDIVGIASY--APYYY---------PRMSEKHLVKYFK 116 (293)
T ss_dssp HHHHHHHHHHHHTTCSC--EEEECC-CSCHHHHHHHHHHGGGSCCSEEEEE--CCCSC---------SSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--EEEecC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC---------CCCCHHHHHHHHH
Confidence 56666777777665433 888986 5677888999999999999998764 34421 1 24466778888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+.+++||++--.|
T Consensus 117 ~va~a~~lPiilYn~P 132 (293)
T 1w3i_A 117 TLCEVSPHPVYLYNYP 132 (293)
T ss_dssp HHHHHCSSCEEEEECH
T ss_pred HHHhhCCCCEEEEECc
Confidence 8888889999997654
No 342
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=96.24 E-value=0.067 Score=52.96 Aligned_cols=115 Identities=21% Similarity=0.243 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhhC---CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEcc---CCCCCCC--c-cccccccc-cC
Q 014581 133 LETMLKEFKQLKALY---PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF---SCPHGMP--E-RKMGAAVG-QD 202 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~---~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~---scP~~~~--~-~~~G~~l~-~~ 202 (422)
+.++++.+++.++.. .+.||++-+..+.+.++..++|+.++++|+|+|.+.- +.+.... . ...|+--+ ..
T Consensus 201 l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i 280 (367)
T 3zwt_A 201 LRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPL 280 (367)
T ss_dssp HHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGG
T ss_pred HHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCccc
Confidence 344555555443321 2689999997666778899999999999999999752 1121100 0 01111101 12
Q ss_pred hhHHHHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 203 CRLLEEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 203 ~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
.....+++..+++.+ ++||+. ..++.+.. .+..+.++|||+|.+.
T Consensus 281 ~p~a~~~v~~i~~~v~~~ipvI~--~GGI~s~~-da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 281 RDLSTQTIREMYALTQGRVPIIG--VGGVSSGQ-DALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHHHHHHTTTCSCEEE--ESSCCSHH-HHHHHHHHTCSEEEES
T ss_pred chhHHHHHHHHHHHcCCCceEEE--ECCCCCHH-HHHHHHHcCCCEEEEC
Confidence 233457778888887 789886 45565544 4555556999998654
No 343
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.20 E-value=0.047 Score=53.13 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=61.9
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCC------cccccccccc-ChhHHHHHHHHHhhcc--Cc
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP------ERKMGAAVGQ-DCRLLEEVCGWINAKA--TV 219 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~------~~~~G~~l~~-~~~~v~~iv~~vr~~~--~i 219 (422)
+.||++-+..+.+.++..++++.++++|+|+|.+.-....... ....|+.-+. ......+.++.+++.+ ++
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i 290 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL 290 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC
Confidence 6899999876667788899999999999999998532110000 0011111010 1112335667777776 79
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
||+. ...+.+... +.++.++|||+|.+.
T Consensus 291 pVi~--~GGI~~~~d-a~~~l~~GAd~V~ig 318 (336)
T 1f76_A 291 PIIG--VGGIDSVIA-AREKIAAGASLVQIY 318 (336)
T ss_dssp CEEE--ESSCCSHHH-HHHHHHHTCSEEEES
T ss_pred CEEE--ECCCCCHHH-HHHHHHCCCCEEEee
Confidence 9886 466666554 445556899998654
No 344
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.17 E-value=0.054 Score=51.37 Aligned_cols=75 Identities=15% Similarity=0.081 Sum_probs=59.6
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++|+...+.||++|.+..-. . .++| +++.++.+++.+ ++||
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~-~-------------------~f~G---------s~~~l~~ir~~v-------~lPv 116 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQ-R-------------------RFQG---------SLDDLDAVRASV-------SIPV 116 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCG-G-------------------GHHH---------HHHHHHHHHHHC-------SSCE
T ss_pred CHHHHHHHHHHcCCCEEEEecCh-h-------------------hcCC---------CHHHHHHHHHhC-------CCCE
Confidence 67899999999999999765210 0 0111 346777888876 8999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
+.-+.|.+..++.++..+|||+|.++.+.+.
T Consensus 117 l~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 117 LRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred EECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 9999999999999999999999999887664
No 345
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.17 E-value=0.2 Score=48.06 Aligned_cols=159 Identities=12% Similarity=0.147 Sum_probs=96.5
Q ss_pred HHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC-C---hHHHHHHHH
Q 014581 169 IDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT-D---ITEPARVAL 240 (422)
Q Consensus 169 a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~-~---~~~~a~~l~ 240 (422)
|+.++++|+|+|=+.=+ .-.+.+.. ..-..+.+...++.|.+.+++||++=+...+. + ..+.++.+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~-----~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~ 104 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDL-----GISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMI 104 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSS-----SCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCC-----CCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHH
Confidence 56778899999987522 01111110 01244566667777777789999999866554 3 456778888
Q ss_pred HcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCC---
Q 014581 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE--- 317 (422)
Q Consensus 241 ~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~--- 317 (422)
++|+++|.+=+.... + ..|-+.|+.+.|... .+.+|+.+..... ..++-|++=..-.
T Consensus 105 ~aGa~gv~iEd~~~~----------k--------~cgH~~gk~L~p~~~-~~~~I~Aa~~a~~-~~~~~i~aRtda~~~~ 164 (295)
T 1xg4_A 105 KAGAAGLHIEDQVGA----------K--------RSGHRPNKAIVSKEE-MVDRIRAAVDAKT-DPDFVIMARTDALAVE 164 (295)
T ss_dssp HHTCSEEEEECBCSS----------C--------CCTTSSSCCBCCHHH-HHHHHHHHHHHCS-STTSEEEEEECCHHHH
T ss_pred HcCCeEEEECCCCCC----------c--------ccCCCCCCccCCHHH-HHHHHHHHHHhcc-CCCcEEEEecHHhhhc
Confidence 999999987654311 0 123344566667653 4455555443221 1256677654432
Q ss_pred ----CHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 318 ----TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 318 ----s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
.-+++..+..+|||+|.+-.. .. +..++++.+.+.
T Consensus 165 gl~~ai~ra~ay~eAGAd~i~~e~~--~~-~~~~~~i~~~~~ 203 (295)
T 1xg4_A 165 GLDAAIERAQAYVEAGAEMLFPEAI--TE-LAMYRQFADAVQ 203 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEETTC--CS-HHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC--CC-HHHHHHHHHHcC
Confidence 234566677899999998652 22 567888888775
No 346
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.17 E-value=0.12 Score=48.33 Aligned_cols=131 Identities=17% Similarity=0.172 Sum_probs=83.1
Q ss_pred CeEEEEeCCCCCH--------HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccE
Q 014581 150 KILIASIMEEYNK--------AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221 (422)
Q Consensus 150 ~pvi~si~~~~~~--------~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv 221 (422)
..||+.+.. ++| .+..++|+..++. +.+|-+-.- ..| +....+ .++.+|+.+++||
T Consensus 41 ~~vIaE~K~-aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVlTd-------~~~---F~gs~~----dL~~ir~~v~lPv 104 (251)
T 1i4n_A 41 VKIIAEFKK-ASPSAGDINADASLEDFIRMYDEL-ADAISILTE-------KHY---FKGDPA----FVRAARNLTCRPI 104 (251)
T ss_dssp CEEEEEECS-BCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEECC-------CSS---SCCCTH----HHHHHHTTCCSCE
T ss_pred ceEEEeecC-CCCCCCccCCCCCHHHHHHHHHHh-CCceEEEec-------ccc---cCCCHH----HHHHHHHhCCCCE
Confidence 568888852 221 1456788888887 999887521 111 122233 3556677789999
Q ss_pred EEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhc
Q 014581 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKS 301 (422)
Q Consensus 222 ~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~ 301 (422)
+.|= ++.+..++.+ +..+|||+|.+..+... +..+..+.+..+.+
T Consensus 105 LrKD--fi~~~~qi~e-a~~~GAD~ilLi~a~l~------------------------------~~~l~~l~~~a~~l-- 149 (251)
T 1i4n_A 105 LAKD--FYIDTVQVKL-ASSVGADAILIIARILT------------------------------AEQIKEIYEAAEEL-- 149 (251)
T ss_dssp EEEC--CCCSTHHHHH-HHHTTCSEEEEEGGGSC------------------------------HHHHHHHHHHHHTT--
T ss_pred EEee--CCCCHHHHHH-HHHcCCCEEEEecccCC------------------------------HHHHHHHHHHHHHc--
Confidence 9884 4455556554 88999999988865311 11122222222222
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHh-CCCEEEEhhH
Q 014581 302 EFNDKDYSLSGIGGVETGGDAAEFILL-GANTVQVCTG 338 (422)
Q Consensus 302 ~~~~~~ipIIa~GGI~s~~da~~~l~a-GAd~V~vgta 338 (422)
++.+++ -+++.+++.+++.+ |++.|.+-..
T Consensus 150 -----Gl~~lv--Ev~~~eE~~~A~~l~g~~iIGinnr 180 (251)
T 1i4n_A 150 -----GMDSLV--EVHSREDLEKVFSVIRPKIIGINTR 180 (251)
T ss_dssp -----TCEEEE--EECSHHHHHHHHTTCCCSEEEEECB
T ss_pred -----CCeEEE--EeCCHHHHHHHHhcCCCCEEEEeCc
Confidence 455555 47899999999999 9999988753
No 347
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.14 E-value=0.032 Score=53.32 Aligned_cols=88 Identities=17% Similarity=0.105 Sum_probs=59.9
Q ss_pred HHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 207 EEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 207 ~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
.+-++.+|+.. .++|.|-. .+ .+-++.+.++|+|.|.+.|.+.
T Consensus 183 ~~av~~ar~~~~~~~~IgVev----~t-~eea~eA~~aGaD~I~ld~~~~------------------------------ 227 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEV----RS-LEELEEALEAGADLILLDNFPL------------------------------ 227 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEE----SS-HHHHHHHHHHTCSEEEEESCCH------------------------------
T ss_pred HHHHHHHHHhCCCCCEEEEEe----CC-HHHHHHHHHcCCCEEEECCCCH------------------------------
Confidence 34455555544 35677632 23 3446677789999997776321
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
..++++.+.+.+ ++|+.++|||. .+.+.++..+|+|.|.+++...
T Consensus 228 -----~~~k~av~~v~~-----~ipi~AsGGIt-~eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 228 -----EALREAVRRVGG-----RVPLEASGNMT-LERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp -----HHHHHHHHHHTT-----SSCEEEESSCC-HHHHHHHHHHTCSEEECTHHHH
T ss_pred -----HHHHHHHHHhCC-----CCeEEEEcCCC-HHHHHHHHHcCCCEEEEcHHHc
Confidence 123344444432 68999999995 9999999999999999987654
No 348
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.12 E-value=0.0044 Score=55.43 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=32.8
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 307 DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
++|||+.|+|++.+|+.+ +.+||++|..++.-+++
T Consensus 149 ~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 149 GRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp TSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred CCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 799999999999999999 99999999999877765
No 349
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.11 E-value=0.13 Score=46.11 Aligned_cols=81 Identities=22% Similarity=0.201 Sum_probs=55.6
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEE--EECC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWA--KMTP 227 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~v--Kl~~ 227 (422)
++++++- ..+.++..++++.+.+ |+|.+|+... +. .. .-+ ++++++++.+ +.|+++ |+.
T Consensus 2 ~li~a~d-~~~~~~~~~~~~~~~~-~v~~iev~~~--~~---~~------~g~----~~i~~l~~~~~~~~i~~~l~~~- 63 (207)
T 3ajx_A 2 KLQVAID-LLSTEAALELAGKVAE-YVDIIELGTP--LI---KA------EGL----SVITAVKKAHPDKIVFADMKTM- 63 (207)
T ss_dssp EEEEEEC-CSCHHHHHHHHHHHGG-GCSEEEECHH--HH---HH------HCT----HHHHHHHHHSTTSEEEEEEEEC-
T ss_pred eEEEEeC-CCCHHHHHHHHHHhhc-cCCEEEECcH--HH---Hh------hCH----HHHHHHHHhCCCCeEEEEEEec-
Confidence 4677774 4578888888888877 8999999652 10 00 112 3566666665 789886 753
Q ss_pred CCCChHHHHHHHHHcCCCEEEEec
Q 014581 228 NITDITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n 251 (422)
+. ....++.+.++|+|+|+++.
T Consensus 64 di--~~~~~~~a~~~Gad~v~vh~ 85 (207)
T 3ajx_A 64 DA--GELEADIAFKAGADLVTVLG 85 (207)
T ss_dssp SC--HHHHHHHHHHTTCSEEEEET
T ss_pred Cc--cHHHHHHHHhCCCCEEEEec
Confidence 21 34568899999999999875
No 350
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.10 E-value=0.053 Score=53.89 Aligned_cols=101 Identities=12% Similarity=0.026 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCC---------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhH
Q 014581 135 TMLKEFKQLKALYPDKILIASIME---------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRL 205 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~---------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~ 205 (422)
-.++.++.+++..+..||.+.+.. +.+.+++.+++++++++|+|+|++....-... .. + ..
T Consensus 218 ~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~--~~-~----~~--- 287 (377)
T 2r14_A 218 FPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGG--DI-T----YP--- 287 (377)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC---------C----CC---
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC--CC-c----ch---
Confidence 344556666665542399998742 12357789999999999999999864321100 00 0 11
Q ss_pred HHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 206 LEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
.+.++.+|+.+++||++ ...+ + .+.++.+.+.| +|+|.+.
T Consensus 288 -~~~~~~ik~~~~iPvi~--~Ggi-~-~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 288 -EGFREQMRQRFKGGLIY--CGNY-D-AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp -TTHHHHHHHHCCSEEEE--ESSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred -HHHHHHHHHHCCCCEEE--ECCC-C-HHHHHHHHHCCCceEEeec
Confidence 23456677777999987 3555 3 56677777776 9988654
No 351
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.10 E-value=1.1 Score=43.13 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALY-PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~-~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
.++..+.++.+.+.. ...||++.++ +.+.++-.+.++.++++|+|++-+- .|.. +.....+.+.+.+..+
T Consensus 60 ~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~Pyy------~~~~~~s~~~l~~~f~ 130 (309)
T 3fkr_A 60 DDERDVLTRTILEHVAGRVPVIVTTS-HYSTQVCAARSLRAQQLGAAMVMAM--PPYH------GATFRVPEAQIFEFYA 130 (309)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEC--CSCB------TTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecC-CchHHHHHHHHHHHHHcCCCEEEEc--CCCC------ccCCCCCHHHHHHHHH
Confidence 345444454444332 2579999996 5678888999999999999999763 3432 0001234567888888
Q ss_pred HHhhccCccEEEEECCCCCC---hHHHHHHHH
Q 014581 212 WINAKATVPVWAKMTPNITD---ITEPARVAL 240 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~ 240 (422)
.|.+.+++||++--.|. +. ..+...++.
T Consensus 131 ~va~a~~lPiilYn~P~-tg~~l~~~~~~~La 161 (309)
T 3fkr_A 131 RVSDAIAIPIMVQDAPA-SGTALSAPFLARMA 161 (309)
T ss_dssp HHHHHCSSCEEEEECGG-GCCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEEeCCC-CCCCCCHHHHHHHH
Confidence 89888899999987663 21 244555554
No 352
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.05 E-value=0.035 Score=52.73 Aligned_cols=75 Identities=12% Similarity=0.011 Sum_probs=59.7
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
++.++|+...++||++|.+..-. . .++| .++.+..+++.+ ++||
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~---------~-----------~f~G---------s~~~L~~ir~~v-------~lPV 123 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDT---------P-----------SFQG---------APEFLTAARQAC-------SLPA 123 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCS---------T-----------TTCC---------CHHHHHHHHHTS-------SSCE
T ss_pred CHHHHHHHHHHCCCCEEEEeccc---------c-----------ccCC---------CHHHHHHHHHhc-------CCCE
Confidence 68899999999999999765310 0 0122 135677787765 8999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
+--+.|.++.++.++..+|||+|.+..+.+.
T Consensus 124 l~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 124 LRKDFLFDPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp EEESCCCSTHHHHHHHHTTCSEEEEETTTSC
T ss_pred EECCccCCHHHHHHHHHcCCCEEEEcccccC
Confidence 9999999999999999999999999988773
No 353
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=96.02 E-value=0.18 Score=50.11 Aligned_cols=155 Identities=9% Similarity=0.012 Sum_probs=97.4
Q ss_pred CeEEEEeCCCCCHHH-HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIMEEYNKAA-WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~-~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++..+ ++++ ..++.+.+++.|+..+-+.++.. +++.-.+.+++||+.+ ++++.+..+
T Consensus 138 v~~~~t~~~~-~~~~~~~~~~~~~~~~G~~~~KiKvg~~--------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASG-DTAKDIAEAQKMLDLRRHRIFKLKIGAG--------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSS-CHHHHHHHHHHHHHTTSCSEEEEECCSS--------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCC-ChHHHHHHHHHHHHhCCCCEEEEeeCCC--------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 4565666433 4544 44444555546999999987532 1233345667777765 578999877
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.|+..|. +|.+ |..++..+++++..
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE----------------qP~~-----------------~~d~~~~~~l~~~~----- 244 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIE----------------QPIS-----------------RNNRAGMVRLNASS----- 244 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEE----------------CCBC-----------------TTCHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHHhhcCcCeee----------------CCCC-----------------ccCHHHHHHHHHhC-----
Confidence 6654 245667778887766551 2221 11234556677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++..-+.+..|+.+++..| +|.||+--.-. .|..-..++. .+.+.+|+.
T Consensus 245 --~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~----~~A~~~gi~ 298 (382)
T 3dgb_A 245 --PAPIMADESIECVEDAFNLAREGAASVFALKIAKN-GGPRATLRTA----AIAEAAGIG 298 (382)
T ss_dssp --SSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHH----HHHHHHTCE
T ss_pred --CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999865 78999875443 2343333332 344455553
No 354
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=96.01 E-value=0.34 Score=45.87 Aligned_cols=175 Identities=19% Similarity=0.117 Sum_probs=95.7
Q ss_pred ChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcc-cccc--ccccChhHHH
Q 014581 131 RPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPER-KMGA--AVGQDCRLLE 207 (422)
Q Consensus 131 ~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~-~~G~--~l~~~~~~v~ 207 (422)
...+++++.+++-.+. +.|++..-. +.-. .||..++.|+|.|-+--|-...+.-+ ...+ .+++--+.+.
T Consensus 11 ~~r~~il~~l~~~i~~--~~~iig~ga-GtGl-----sAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~ 82 (286)
T 2p10_A 11 PTRSELVDRFQKKIRA--GEPIIGGGA-GTGL-----SAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVV 82 (286)
T ss_dssp CCHHHHHHHHHHHHHT--TCCEEEEEE-SSHH-----HHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHH
T ss_pred cCHHHHHHHHHHHHhc--CCceEEEec-ccch-----hhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHH
Confidence 3478888888755543 667776554 2211 35667778999988731100000000 0000 1122235566
Q ss_pred HHHHHHhhcc-CccEEEEECCCC--CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCc
Q 014581 208 EVCGWINAKA-TVPVWAKMTPNI--TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284 (422)
Q Consensus 208 ~iv~~vr~~~-~iPv~vKl~~~~--~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i 284 (422)
++-++|--.+ ++||+.-+.+.- .+...+.+.++++|+.|+ .|...- -.||-. ++... ..-|+.
T Consensus 83 e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv--~N~ptv-glidG~-fr~~L------EE~gm~---- 148 (286)
T 2p10_A 83 DMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV--QNFPTV-GLIDGL-FRQNL------EETGMS---- 148 (286)
T ss_dssp HHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE--EECSCG-GGCCHH-HHHHH------HHTTCC----
T ss_pred HHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE--EECCCc-ccccch-hhhhH------hhcCCC----
Confidence 6666655444 789999876532 256777899999999999 564211 112311 00000 001110
Q ss_pred chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
+. +.+..++++- +.-+.-..=++|.+++.++.++|+|.+-+.=
T Consensus 149 --~~-~eve~I~~A~-------~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~ 191 (286)
T 2p10_A 149 --YA-QEVEMIAEAH-------KLDLLTTPYVFSPEDAVAMAKAGADILVCHM 191 (286)
T ss_dssp --HH-HHHHHHHHHH-------HTTCEECCEECSHHHHHHHHHHTCSEEEEEC
T ss_pred --HH-HHHHHHHHHH-------HCCCeEEEecCCHHHHHHHHHcCCCEEEECC
Confidence 11 2233333332 3445666778999999999999999876653
No 355
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=95.98 E-value=0.1 Score=51.50 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhCCCCeEEEEeCCCC---------CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHH
Q 014581 136 MLKEFKQLKALYPDKILIASIMEEY---------NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~si~~~~---------~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v 206 (422)
.++.++.+++..+..||.+-+.... ..+++.++++.++++|+|+|++.... . |.
T Consensus 206 ~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~------~~--------- 268 (362)
T 4ab4_A 206 LLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE--A------DD--------- 268 (362)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--C------TT---------
T ss_pred HHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--C------CH---------
Confidence 3445566666554339999885321 14578899999999999999986432 1 11
Q ss_pred HHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 207 ~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
++++.+|+.+++||++= ..+ + .+.++.+.+.| +|.|.+.
T Consensus 269 -~~~~~ik~~~~iPvi~~--Ggi-t-~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 269 -SIGPLIKEAFGGPYIVN--ERF-D-KASANAALASGKADAVAFG 308 (362)
T ss_dssp -CCHHHHHHHHCSCEEEE--SSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred -HHHHHHHHHCCCCEEEe--CCC-C-HHHHHHHHHcCCccEEEEC
Confidence 23456666668998873 445 4 45566666666 8987543
No 356
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=95.98 E-value=0.067 Score=53.74 Aligned_cols=131 Identities=11% Similarity=0.011 Sum_probs=85.3
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHHHHHHH
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEPARVAL 240 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~ 240 (422)
.+.++.+.+.|+..+-++-..+. ....|..+. .+.+...+.+++||+.+ +.+|.+..+..++ +..++++.+.
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~---~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~ 237 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDF---ASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALA 237 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHH---HTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGG
T ss_pred HHHHHHHHHcCCCEEEECCccCc---cccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHH
Confidence 45566666789999999521100 001111111 12344567788888876 6899998776554 3456677788
Q ss_pred HcCCCEEEEecCCcccccccccCCCC-CCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCH
Q 014581 241 RSGSEGVSAINTIMSVMGIDLKTLRP-EPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG 319 (422)
Q Consensus 241 ~aGadgi~v~n~~~~~~~id~e~~~p-~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~ 319 (422)
+.|++.|. +| .+ |..+...+++++.. ++||++...+.+.
T Consensus 238 ~~~i~~iE----------------qP~~~-----------------~~~~~~~~~l~~~~-------~iPIa~dE~~~~~ 277 (410)
T 3dip_A 238 DYGVLWVE----------------DPIAK-----------------MDNIPAVADLRRQT-------RAPICGGENLAGT 277 (410)
T ss_dssp GGTCSEEE----------------CCBSC-----------------TTCHHHHHHHHHHH-------CCCEEECTTCCSH
T ss_pred hcCCCEEE----------------CCCCC-----------------cccHHHHHHHHhhC-------CCCEEecCCcCCH
Confidence 88877663 22 11 11234456677766 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEhhHH
Q 014581 320 GDAAEFILLG-ANTVQVCTGV 339 (422)
Q Consensus 320 ~da~~~l~aG-Ad~V~vgtal 339 (422)
+|+.+++..| +|.||+--.-
T Consensus 278 ~~~~~~l~~~~~d~v~~k~~~ 298 (410)
T 3dip_A 278 RRFHEMLCADAIDFVMLDLTW 298 (410)
T ss_dssp HHHHHHHHTTCCSEEEECTTT
T ss_pred HHHHHHHHcCCCCeEeecccc
Confidence 9999999986 7999986443
No 357
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.95 E-value=0.041 Score=52.96 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhC-CCEEEEccCC-------CCCC-----Ccccccccc
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSC-------PHGM-----PERKMGAAV 199 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aG-aD~iElN~sc-------P~~~-----~~~~~G~~l 199 (422)
.+...+.++.+++.. +.||++-+..+.+.+++.++++.++++| +|+|.+.-.. +... .....|+.-
T Consensus 145 ~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~s 223 (314)
T 2e6f_A 145 FEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLG 223 (314)
T ss_dssp HHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEE
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccC
Confidence 444555666666654 7899998875567888899999999999 9999864211 0000 000111100
Q ss_pred c-cChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 200 G-QDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 200 ~-~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+ .......+.++.+++.+ ++||+. ..++.+..... ++.++|||+|.+.
T Consensus 224 g~~~~p~~~~~i~~v~~~~~~ipvi~--~GGI~~~~da~-~~l~~GAd~V~ig 273 (314)
T 2e6f_A 224 GKYILPTALANVNAFYRRCPDKLVFG--CGGVYSGEDAF-LHILAGASMVQVG 273 (314)
T ss_dssp SGGGHHHHHHHHHHHHHHCTTSEEEE--ESSCCSHHHHH-HHHHHTCSSEEEC
T ss_pred cccccHHHHHHHHHHHHhcCCCCEEE--ECCCCCHHHHH-HHHHcCCCEEEEc
Confidence 1 11112346777788887 899886 46666655444 4447899998654
No 358
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.92 E-value=0.21 Score=51.52 Aligned_cols=132 Identities=18% Similarity=0.238 Sum_probs=82.1
Q ss_pred CHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCCC
Q 014581 70 NYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPD 149 (422)
Q Consensus 70 ~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~ 149 (422)
..+.+..|.++|+-++++-+..- + .+..++.++.+|+.+|+
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahG-------------------------h--------------s~~v~~~i~~ik~~~p~ 322 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQG-------------------------N--------------SVYQIEFIKWIKQTYPK 322 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCC-------------------------C--------------SHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcCCcEEEEecccc-------------------------c--------------cHHHHHHHHHHHhhCCc
Confidence 35667888889999888754211 0 13345667788888999
Q ss_pred CeEEE-EeCCCCCHHHHHHHHHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEE
Q 014581 150 KILIA-SIMEEYNKAAWEELIDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224 (422)
Q Consensus 150 ~pvi~-si~~~~~~~~~~~~a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vK 224 (422)
.+|++ |+. +.+ .++.+.++|||++-+.++ |-... ..+.| . .+...+.++.++.++ ..+||+.-
T Consensus 323 ~~viaGNVa---T~e----~a~~Li~aGAD~vkVGiGpGSiCtTr~-v~GvG--~-PQ~tAi~~~a~~a~~-~~vpvIAD 390 (556)
T 4af0_A 323 IDVIAGNVV---TRE----QAAQLIAAGADGLRIGMGSGSICITQE-VMAVG--R-PQGTAVYAVAEFASR-FGIPCIAD 390 (556)
T ss_dssp SEEEEEEEC---SHH----HHHHHHHHTCSEEEECSSCSTTBCCTT-TCCSC--C-CHHHHHHHHHHHHGG-GTCCEEEE
T ss_pred ceEEecccc---CHH----HHHHHHHcCCCEEeecCCCCccccccc-ccCCC--C-cHHHHHHHHHHHHHH-cCCCEEec
Confidence 88876 774 343 456677789999999986 33211 01111 1 223345555554444 48999975
Q ss_pred ECCCCCChHHHHHHHHHcCCCEEEEecCCcc
Q 014581 225 MTPNITDITEPARVALRSGSEGVSAINTIMS 255 (422)
Q Consensus 225 l~~~~~~~~~~a~~l~~aGadgi~v~n~~~~ 255 (422)
..+...-.++| +..+|||.|.+..-+.+
T Consensus 391 --GGI~~sGDi~K-AlaaGAd~VMlGsllAG 418 (556)
T 4af0_A 391 --GGIGNIGHIAK-ALALGASAVMMGGLLAG 418 (556)
T ss_dssp --SCCCSHHHHHH-HHHTTCSEEEESTTTTT
T ss_pred --CCcCcchHHHH-HhhcCCCEEEEchhhcc
Confidence 33444555554 56899999987765544
No 359
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.91 E-value=0.17 Score=49.12 Aligned_cols=125 Identities=14% Similarity=0.011 Sum_probs=84.4
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
+.||+..=|.+.+.. +++..+.++|.-++-- +.+ .+++.+.+.++.+++.++.|+.|.+...
T Consensus 26 ~~Pii~apM~gvs~~---~la~av~~aGglG~i~---~~~------------~~~~~l~~~i~~i~~~~~~p~gVnl~~~ 87 (326)
T 3bo9_A 26 EHPILMGGMAWAGTP---TLAAAVSEAGGLGIIG---SGA------------MKPDDLRKAISELRQKTDKPFGVNIILV 87 (326)
T ss_dssp SSSEEECCCTTTSCH---HHHHHHHHTTSBEEEE---CTT------------CCHHHHHHHHHHHHTTCSSCEEEEEETT
T ss_pred CCCEEECCCCCCCCH---HHHHHHHhCCCcEEeC---CCC------------CCHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 568776555444332 3455566777655431 111 3567788889999988888999887543
Q ss_pred CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCc
Q 014581 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDY 308 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~i 308 (422)
-.+..+.++.+.+.|+|.|.++... | .+.++.+++. ++
T Consensus 88 ~~~~~~~~~~~~~~g~d~V~l~~g~--------------------------------p--~~~~~~l~~~--------g~ 125 (326)
T 3bo9_A 88 SPWADDLVKVCIEEKVPVVTFGAGN--------------------------------P--TKYIRELKEN--------GT 125 (326)
T ss_dssp STTHHHHHHHHHHTTCSEEEEESSC--------------------------------C--HHHHHHHHHT--------TC
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCC--------------------------------c--HHHHHHHHHc--------CC
Confidence 2346788889999999998764321 1 1234444432 57
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 309 SLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 309 pIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
+|+. +|.+.+++.++..+|||+|.+
T Consensus 126 ~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 126 KVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp EEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred cEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 7775 689999999999999999988
No 360
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=95.91 E-value=0.31 Score=47.10 Aligned_cols=160 Identities=21% Similarity=0.144 Sum_probs=94.8
Q ss_pred HHHHHHHhCCCEEEEccC-CC---CCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCC---hHHHHHHH
Q 014581 168 LIDRVEETGIDAIEVNFS-CP---HGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITD---ITEPARVA 239 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~s-cP---~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~---~~~~a~~l 239 (422)
.|+.++++|+|+|=+.=+ .- ...+.. ..-..+.+...++.|.+.+ ++||++=+.-.+.+ ..+.++.+
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD~-----~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l 125 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPDF-----GLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIREL 125 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCSS-----SCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCCC-----CCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHH
Confidence 356777899999987521 10 010100 0124455666777777777 99999998766554 45677888
Q ss_pred HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCC--
Q 014581 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE-- 317 (422)
Q Consensus 240 ~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~-- 317 (422)
.++|+++|.+=+.... + ..|-+.|+.+.|... .+.+|+.+..... ..++-|++=..-.
T Consensus 126 ~~aGaagv~iED~~~~------k------------~cgH~~gk~L~p~~e-~~~rI~Aa~~A~~-~~~~~I~ARtda~a~ 185 (318)
T 1zlp_A 126 ISAGAKGVFLEDQVWP------K------------KCGHMRGKAVVPAEE-HALKIAAAREAIG-DSDFFLVARTDARAP 185 (318)
T ss_dssp HHTTCCEEEEECBCSS------C------------CCSSSSCCCBCCHHH-HHHHHHHHHHHHT-TSCCEEEEEECTHHH
T ss_pred HHcCCcEEEECCCCCC------c------------cccCCCCCccCCHHH-HHHHHHHHHHhcc-cCCcEEEEeeHHhhh
Confidence 9999999987664311 0 112334566667653 3444444332211 0256677654432
Q ss_pred -----CHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 318 -----TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 318 -----s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
.-+++..+..+|||+|.+=.. .. +..++++.+.+.
T Consensus 186 ~gl~~ai~Ra~Ay~eAGAd~i~~e~~--~~-~e~~~~i~~~l~ 225 (318)
T 1zlp_A 186 HGLEEGIRRANLYKEAGADATFVEAP--AN-VDELKEVSAKTK 225 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCC--CS-HHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEcCC--CC-HHHHHHHHHhcC
Confidence 223555667799999998642 22 567778877764
No 361
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.88 E-value=0.038 Score=54.56 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=52.3
Q ss_pred ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 231 ~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+..+.++.+.++|+|.|++.-.. |++ ...++.|+.+++..+ ++||
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~------------------------G~~-----~~~~e~I~~ir~~~~------~~~V 144 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAH------------------------AHA-----KYVGKTLKSLRQLLG------SRCI 144 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSC------------------------CSS-----HHHHHHHHHHHHHHT------TCEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC------------------------CCc-----HhHHHHHHHHHHhcC------CCeE
Confidence 35678999999999977653211 111 223567778888763 6888
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++ |+|.|++++.+++.+|||+|.++
T Consensus 145 i~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 145 MA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp EE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred EE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 87 67999999999999999999985
No 362
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.87 E-value=0.037 Score=50.56 Aligned_cols=132 Identities=11% Similarity=0.048 Sum_probs=75.3
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+++. +.+++.-+...--+......++.+.+.|+|++.+|... | .+.++..++.. .
T Consensus 51 v~~l~~~--~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~~---------G------~~~l~~~~~~~----~- 108 (213)
T 1vqt_A 51 FDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCA---------G------YESVERALSAT----D- 108 (213)
T ss_dssp HHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGG---------C------HHHHHHHHHHC----S-
T ss_pred HHHHHHC--CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEeccC---------C------HHHHHHHHHhc----C-
Confidence 4445543 67899888532234444556677778899999998531 1 12333343332 2
Q ss_pred cEEEEECC--CC-----CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHH
Q 014581 220 PVWAKMTP--NI-----TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292 (422)
Q Consensus 220 Pv~vKl~~--~~-----~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v 292 (422)
|..+-+.. .. ..+...++. .+.|++ +++. + ..+
T Consensus 109 ~~~~~V~~lts~~~~l~~~v~~~a~~-~e~G~d-vV~~-----------------------------------~---~~~ 148 (213)
T 1vqt_A 109 KHVFVVVKLTSMEGSLEDYMDRIEKL-NKLGCD-FVLP-----------------------------------G---PWA 148 (213)
T ss_dssp SEEEEECCCTTSCCCHHHHHHHHHHH-HHHTCE-EECC-----------------------------------H---HHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHH-hcCCCE-EEEc-----------------------------------H---HHH
Confidence 42222221 11 123456777 888888 4321 1 123
Q ss_pred HHHHHHhhccCCCCCceEEEecCCCCHH---H------HHHHHHhCCCEEEEhhHHHhh
Q 014581 293 MSIAKMMKSEFNDKDYSLSGIGGVETGG---D------AAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 293 ~~i~~~~~~~~~~~~ipIIa~GGI~s~~---d------a~~~l~aGAd~V~vgtall~~ 342 (422)
+++++.+ +.+ +.++||.--. | ..+ +.+|||.+.+||+++..
T Consensus 149 ~~ir~~~-------~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a 198 (213)
T 1vqt_A 149 KALREKI-------KGK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLS 198 (213)
T ss_dssp HHHTTTC-------CSC-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTS
T ss_pred HHHHHHC-------CCC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCC
Confidence 3455544 235 7788885322 2 577 89999999999999974
No 363
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=95.87 E-value=0.038 Score=51.16 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=93.5
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC----CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS----CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 152 vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s----cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
+..||. ..+...+.+.++.+ ++|+|.+++.+- .||. .+| + .+++++|+.+++|+-+-+-.
T Consensus 3 i~pSil-a~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~----t~G------~----~~v~~lr~~~~~~~dvhLmv 66 (231)
T 3ctl_A 3 ISPSLM-CMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL----TLS------P----FFVSQVKKLATKPLDCHLMV 66 (231)
T ss_dssp EEEBGG-GSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC----CBC------H----HHHHHHHTTCCSCEEEEEES
T ss_pred EEeehh-hCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc----hhc------H----HHHHHHHhccCCcEEEEEEe
Confidence 456775 34555666777778 889999888862 2442 122 1 36778888778888776543
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
.++.+.++.+.++|+|+|+++.-. + . +...+.++.+++. +
T Consensus 67 --~dp~~~i~~~~~aGAd~itvh~Ea-----~-----------------~--------~~~~~~i~~i~~~--------G 106 (231)
T 3ctl_A 67 --TRPQDYIAQLARAGADFITLHPET-----I-----------------N--------GQAFRLIDEIRRH--------D 106 (231)
T ss_dssp --SCGGGTHHHHHHHTCSEEEECGGG-----C-----------------T--------TTHHHHHHHHHHT--------T
T ss_pred --cCHHHHHHHHHHcCCCEEEECccc-----C-----------------C--------ccHHHHHHHHHHc--------C
Confidence 255667889999999999988311 0 0 0113555666653 3
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCEEEEhhH---HH--hhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 308 YSLSGIGGVETGGDAAEFILLGANTVQVCTG---VM--MHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aGAd~V~vgta---ll--~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+.+...=...|+.+.++.+..++|.|.+-|. +- .-.|..++++ ++++++.+++|+.
T Consensus 107 ~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI-~~lr~~~~~~~~~ 167 (231)
T 3ctl_A 107 MKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKL-AELKAWREREGLE 167 (231)
T ss_dssp CEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHH-HHHHHHHHHHTCC
T ss_pred CeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHH-HHHHHHHhccCCC
Confidence 3333332555777777777779998875332 11 1123344444 4566677666554
No 364
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.86 E-value=0.38 Score=49.56 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=63.1
Q ss_pred HHHHHHHHHhhCCCCeEEE-EeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCC-CccccccccccChhHHHHHHHHH
Q 014581 136 MLKEFKQLKALYPDKILIA-SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM-PERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~-si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~-~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
+++.++.+++.+|+.||++ ++. +.+ .|++++++|+|+|.+..+ |-.. ..+.. ..++.........+..+
T Consensus 283 ~~~~i~~i~~~~~~~pvi~~~v~---t~~----~a~~l~~aGad~I~vg~~-~G~~~~t~~~-~~~g~~~~~~~~~~~~~ 353 (514)
T 1jcn_A 283 QIAMVHYIKQKYPHLQVIGGNVV---TAA----QAKNLIDAGVDGLRVGMG-CGSICITQEV-MACGRPQGTAVYKVAEY 353 (514)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEEC---SHH----HHHHHHHHTCSEEEECSS-CSCCBTTBCC-CSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEecccc---hHH----HHHHHHHcCCCEEEECCC-CCcccccccc-cCCCccchhHHHHHHHH
Confidence 3455677777777889987 663 333 467788899999999542 1110 00100 00111112233455566
Q ss_pred hhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCc
Q 014581 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 254 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~ 254 (422)
++..++||++ ...+.+...++ ++.++|||++.+...+.
T Consensus 354 ~~~~~ipVia--~GGI~~~~di~-kala~GAd~V~iG~~~l 391 (514)
T 1jcn_A 354 ARRFGVPIIA--DGGIQTVGHVV-KALALGASTVMMGSLLA 391 (514)
T ss_dssp HGGGTCCEEE--ESCCCSHHHHH-HHHHTTCSEEEESTTTT
T ss_pred HhhCCCCEEE--ECCCCCHHHHH-HHHHcCCCeeeECHHHH
Confidence 6666899997 34555555544 55568999998776553
No 365
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.84 E-value=0.12 Score=51.09 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCCC----------CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChh
Q 014581 135 TMLKEFKQLKALYPDKILIASIMEE----------YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~~----------~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
-.++.++.+++..++.||.+-|... .+.+++.+++++++++|+|+|++....... .. ...
T Consensus 213 ~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~----~~----~~~-- 282 (364)
T 1vyr_A 213 LVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG----GK----PYS-- 282 (364)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB----CC----CCC--
T ss_pred hHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC----CC----ccc--
Confidence 3445566677666423899855421 145678889999999999999987421110 00 011
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
.+.++.+|+.+++||++= ..+ + .+.++.+.+.| +|+|.+.
T Consensus 283 --~~~~~~v~~~~~iPvi~~--Ggi-t-~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 283 --EAFRQKVRERFHGVIIGA--GAY-T-AEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp --HHHHHHHHHHCCSEEEEE--SSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred --HHHHHHHHHHCCCCEEEE--CCc-C-HHHHHHHHHCCCccEEEEC
Confidence 245677788889999873 445 3 55666666776 9988654
No 366
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=95.77 E-value=0.1 Score=51.47 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=59.2
Q ss_pred HHHHHHHHhhCCCCeEEEEeCCC---------CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHH
Q 014581 137 LKEFKQLKALYPDKILIASIMEE---------YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 137 l~~i~~~k~~~~~~pvi~si~~~---------~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~ 207 (422)
++.++.+++..+..||.+-+... .+.+++.+++++++++|+|+|++.... . | +
T Consensus 215 ~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~------~------~---- 276 (361)
T 3gka_A 215 LEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF--G------G------D---- 276 (361)
T ss_dssp HHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--S------T------T----
T ss_pred HHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC--C------C------H----
Confidence 44455565554323899987531 114678899999999999999986432 1 1 1
Q ss_pred HHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+.++.+|+.+++||++= ..+ + .+.++.+.+.| +|.|.+.
T Consensus 277 ~~~~~ik~~~~iPvi~~--Ggi-t-~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 277 AIGQQLKAAFGGPFIVN--ENF-T-LDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp CCHHHHHHHHCSCEEEE--SSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCCEEEe--CCC-C-HHHHHHHHHcCCccEEEEC
Confidence 23456666668998863 445 4 45666777776 8987543
No 367
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.76 E-value=0.031 Score=54.18 Aligned_cols=85 Identities=18% Similarity=0.115 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCCChHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNITDITEPAR 237 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~ 237 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-+..+..+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~ 100 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGN---------TSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGN 100 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcc---------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHH
Confidence 35678889999998899999976532 13333344555566676666554 68999988654445788899
Q ss_pred HHHHcCCCEEEEecCC
Q 014581 238 VALRSGSEGVSAINTI 253 (422)
Q Consensus 238 ~l~~aGadgi~v~n~~ 253 (422)
.+.++|+|++.+....
T Consensus 101 ~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 101 AAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHTCSEEEECCCC
T ss_pred HHHhcCCCEEEEcCCC
Confidence 9999999999887544
No 368
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.72 E-value=0.054 Score=52.14 Aligned_cols=85 Identities=26% Similarity=0.251 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-+..+- .+..+++
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la 99 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGST---------GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLA 99 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeec---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 467788899999988999999887431 2233344555566666666544 689999876532 3467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 100 ~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 100 ASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHHHTCSEEEEECCC
T ss_pred HHHHhCCCCEEEecCCC
Confidence 99999999999888654
No 369
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=95.69 E-value=0.058 Score=53.77 Aligned_cols=153 Identities=8% Similarity=-0.061 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHHHHH
Q 014581 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEPARV 238 (422)
Q Consensus 163 ~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~ 238 (422)
+++.+.++++.++|++.++++++.... +-.+ ..+.+...++++++|+.+ +++|.+-....++ +..++++.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~-----~~~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~ 223 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGR-----HMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAA 223 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHH-----TSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcc-----cCCc-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHH
Confidence 788888888888899999998642100 0000 013455557788888765 6889987765543 23455666
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET 318 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s 318 (422)
+.+.|++.|- +|.+ ..++..+++++.+.++ +.++||++.+ +.+
T Consensus 224 l~~~~i~~iE----------------~P~~------------------~d~~~~~~l~~~l~~~--g~~iPIa~dE-~~~ 266 (392)
T 3p3b_A 224 LSDVNLYWLE----------------EAFH------------------EDEALYEDLKEWLGQR--GQNVLIADGE-GLA 266 (392)
T ss_dssp TTTSCEEEEE----------------CSSS------------------CCHHHHHHHHHHHHHH--TCCCEEEECC-SSC
T ss_pred HHhcCCCEEe----------------cCCc------------------ccHHHHHHHHHhhccC--CCCccEEecC-CCC
Confidence 6666554331 1211 0123445566652100 0179999999 999
Q ss_pred HHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 319 GGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 319 ~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
.+++.+++..| +|.|++=-.-. |..-..++ .++.+++|+.
T Consensus 267 ~~~~~~~i~~~~~d~v~ik~~~~--Git~~~~i----~~~A~~~gi~ 307 (392)
T 3p3b_A 267 SPHLIEWATRGRVDVLQYDIIWP--GFTHWMEL----GEKLDAHGLR 307 (392)
T ss_dssp CTTHHHHHHTTSCCEECCBTTTB--CHHHHHHH----HHHHHHTTCE
T ss_pred HHHHHHHHHcCCCCEEEeCcccc--CHHHHHHH----HHHHHHcCCE
Confidence 99999999987 79999864443 33333332 3455666663
No 370
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=95.69 E-value=0.27 Score=48.68 Aligned_cols=155 Identities=10% Similarity=0.030 Sum_probs=95.7
Q ss_pred CeEEEEeCCCCCHHHHH-HHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEEC
Q 014581 150 KILIASIMEEYNKAAWE-ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~-~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~ 226 (422)
.|+..++.. .++++.. ++.+.+++.|+..+-+.++.. +++.-.+.+++||+.+ +++|.+..+
T Consensus 137 v~~~~t~~~-~~~~~~~~~~~~~~~~~G~~~~KiKvg~~--------------~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLAS-GDTAKDIAEGEKLLAEGRHRAFKLKIGAR--------------ELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECS-SCHHHHHHHHHHHTC----CEEEEECCSS--------------CHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecC-CChHHHHHHHHHHHHhCCCCEEEEecCCC--------------ChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 456666653 3455543 444444446899999987532 2233445677788776 578999877
Q ss_pred CCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++ +..++++.+.+.++..|. +|.+ +..++..+++++..
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~----- 243 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLIE----------------QPVS-----------------AHDNAALVRLSQQI----- 243 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEEE----------------CCBC-----------------TTCHHHHHHHHHHS-----
T ss_pred CCCCHHHHHHHHHHHhhcCcccee----------------CCCC-----------------cccHHHHHHHHHhC-----
Confidence 6654 345678888888877662 2321 11234556677765
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||++.-.+.+..|+.+++..| +|.||+--.-. .|..-..++. .+.+.+|+.
T Consensus 244 --~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGit~~~~ia----~~A~~~gi~ 297 (381)
T 3fcp_A 244 --ETAILADEAVATAYDGYQLAQQGFTGAYALKIAKA-GGPNSVLALA----RVAQAAGIG 297 (381)
T ss_dssp --SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSTTHHHHHH----HHHHHHTCE
T ss_pred --CCCEEECCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHHH----HHHHHcCCc
Confidence 79999999999999999999875 88999865443 2343333333 334455553
No 371
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.67 E-value=0.075 Score=51.43 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.. ++||++-...+ ..+..+++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la 111 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGT---------TGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALT 111 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSG---------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHH
Confidence 46788889999998899999988732 13333344555566666665544 68999976653 23467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 112 ~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 112 EAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999888644
No 372
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=95.67 E-value=0.074 Score=52.58 Aligned_cols=99 Identities=7% Similarity=-0.066 Sum_probs=62.8
Q ss_pred HHHHHHHHHhhCCCCeEEEEeCC---------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHH
Q 014581 136 MLKEFKQLKALYPDKILIASIME---------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~si~~---------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v 206 (422)
.++.++.+++..+..||.+-|.. +.+.+++.++++.++++|+|+|++.-..-. +.. .. +
T Consensus 214 ~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------~~~-~~-~--- 281 (365)
T 2gou_A 214 LDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWD-------DAP-DT-P--- 281 (365)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTT-------BCC-CC-C---
T ss_pred HHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC-------CCC-Cc-c---
Confidence 34445555554432289986642 124577889999999999999998642100 000 01 1
Q ss_pred HHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 207 ~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
.++++.+|+.+++||++= ..+ + .+.+..+.+.| +|+|.+.
T Consensus 282 ~~~~~~i~~~~~iPvi~~--Ggi-~-~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 282 VSFKRALREAYQGVLIYA--GRY-N-AEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHHCCSEEEEE--SSC-C-HHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHCCCcEEEe--CCC-C-HHHHHHHHHCCCcceehhc
Confidence 246677888889999863 445 3 45677777777 9988644
No 373
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.66 E-value=0.042 Score=53.26 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCCChHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNITDITEPAR 237 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~ 237 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-+..+..+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~Gt---------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~ 100 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGN---------TGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGK 100 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcc---------cCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHH
Confidence 45678889999998899999976522 13333345555666777666544 68999988763335778899
Q ss_pred HHHHcCCCEEEEecCC
Q 014581 238 VALRSGSEGVSAINTI 253 (422)
Q Consensus 238 ~l~~aGadgi~v~n~~ 253 (422)
.+.++|+|++.+....
T Consensus 101 ~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 101 SAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHTTCSEEEECCCC
T ss_pred HHHHcCCCEEEECCCC
Confidence 9999999999887654
No 374
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=95.64 E-value=0.25 Score=46.22 Aligned_cols=118 Identities=13% Similarity=0.116 Sum_probs=74.9
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCC
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSE 245 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGad 245 (422)
.++|+.. ++||++|-+-. +. ..++++ .+ .++.+|+.+++||.-| -++-+..++. .+..+|||
T Consensus 67 ~~iA~~~-~~GA~aiSVLT-----d~-~~F~Gs----~~----~L~~vr~~v~lPvLrK--DFiid~yQI~-eAr~~GAD 128 (258)
T 4a29_A 67 IEYAKFM-ERYAVGLSITT-----EE-KYFNGS----YE----TLRKIASSVSIPILMS--DFIVKESQID-DAYNLGAD 128 (258)
T ss_dssp HHHHHHH-TTTCSEEEEEC-----CS-TTTCCC----HH----HHHHHHTTCSSCEEEE--SCCCSHHHHH-HHHHHTCS
T ss_pred HHHHHHH-hCCCeEEEEeC-----CC-CCCCCC----HH----HHHHHHHhcCCCEeec--cccccHHHHH-HHHHcCCC
Confidence 3455544 57999987652 11 122332 23 3556778889999998 3444555443 45678999
Q ss_pred EEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHH
Q 014581 246 GVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEF 325 (422)
Q Consensus 246 gi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~ 325 (422)
+|.++-.... +..+..+.+++..+ ++.++. -|++.+++.++
T Consensus 129 aILLI~a~L~------------------------------~~~l~~l~~~A~~l-------Gl~~Lv--EVh~~~El~rA 169 (258)
T 4a29_A 129 TVLLIVKILT------------------------------ERELESLLEYARSY-------GMEPLI--LINDENDLDIA 169 (258)
T ss_dssp EEEEEGGGSC------------------------------HHHHHHHHHHHHHT-------TCCCEE--EESSHHHHHHH
T ss_pred eeehHHhhcC------------------------------HHHHHHHHHHHHHH-------hHHHHH--hcchHHHHHHH
Confidence 9988854321 22234444555555 455544 48999999999
Q ss_pred HHhCCCEEEEhhHHH
Q 014581 326 ILLGANTVQVCTGVM 340 (422)
Q Consensus 326 l~aGAd~V~vgtall 340 (422)
+.+||+.++|=..-+
T Consensus 170 l~~~a~iIGINNRnL 184 (258)
T 4a29_A 170 LRIGARFIGIMSRDF 184 (258)
T ss_dssp HHTTCSEEEECSBCT
T ss_pred hcCCCcEEEEeCCCc
Confidence 999999999864433
No 375
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.64 E-value=0.095 Score=52.64 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=62.4
Q ss_pred CCe-EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCC-CC--Cc-cccccccc-cChhHHHHHHHHHhhcc--Ccc
Q 014581 149 DKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPH-GM--PE-RKMGAAVG-QDCRLLEEVCGWINAKA--TVP 220 (422)
Q Consensus 149 ~~p-vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~-~~--~~-~~~G~~l~-~~~~~v~~iv~~vr~~~--~iP 220 (422)
+.| |++=|..+.+.+++.++|+.++++|+|+|.+.-.... .+ .. ...|+--+ .......+++..+++.+ ++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 578 8999976667778999999999999999987521111 00 00 00111101 11233446777777777 799
Q ss_pred EEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 221 VWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 221 v~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
|+. ..++.+... |..+..+|||+|.+.
T Consensus 348 IIg--~GGI~s~eD-a~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIA--SGGIFSGLD-ALEKIEAGASVCQLY 374 (415)
T ss_dssp EEE--CSSCCSHHH-HHHHHHHTEEEEEES
T ss_pred EEE--ECCCCCHHH-HHHHHHcCCCEEEEc
Confidence 986 456666554 445556999988654
No 376
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.63 E-value=0.072 Score=52.01 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-+..+- .+..+++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la 122 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGST---------GIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALA 122 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 467788899999988999999887431 2233345555666777666554 689999887642 3467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 123 ~~A~~~Gadavlv~~P~ 139 (332)
T 2r8w_A 123 KDAEAAGADALLLAPVS 139 (332)
T ss_dssp HHHHHHTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999887544
No 377
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.63 E-value=0.14 Score=50.19 Aligned_cols=109 Identities=12% Similarity=0.092 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCC----CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccc-ccccccChhHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEY----NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM-GAAVGQDCRLLE 207 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~----~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~-G~~l~~~~~~v~ 207 (422)
.+...+.++.+++.. +.||++-+..+. +.++..++++.++++|+|+|.++-..... ++ |..-...+..-.
T Consensus 111 ~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~----g~~g~~~~~~~~~~~ 185 (350)
T 3b0p_A 111 LARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALL----ALSTKANREIPPLRH 185 (350)
T ss_dssp HHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC--------------CCCCCH
T ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhc----ccCcccccCCCcccH
Confidence 455555666676655 789998442122 34577889999999999999987422110 00 000000011123
Q ss_pred HHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 208 EVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+.+..+++.+ ++||++ +.++.+... +..+.+ |+|+|.+.
T Consensus 186 ~~i~~ik~~~~~iPVia--nGgI~s~ed-a~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 186 DWVHRLKGDFPQLTFVT--NGGIRSLEE-ALFHLK-RVDGVMLG 225 (350)
T ss_dssp HHHHHHHHHCTTSEEEE--ESSCCSHHH-HHHHHT-TSSEEEEC
T ss_pred HHHHHHHHhCCCCeEEE--ECCcCCHHH-HHHHHh-CCCEEEEC
Confidence 5566777777 899986 466666554 444455 99999655
No 378
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.60 E-value=0.13 Score=49.46 Aligned_cols=85 Identities=18% Similarity=0.156 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-+..+- .+..+++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la 100 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTT---------GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLT 100 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHH
Confidence 467788899999988999999887431 2233344555566666666544 689999876542 3467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 101 ~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 101 KKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHhcCCCEEEEcCCC
Confidence 99999999999887654
No 379
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.59 E-value=0.062 Score=51.41 Aligned_cols=85 Identities=19% Similarity=0.176 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+ ..+..+++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 89 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTT---------GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELT 89 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc---------cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHH
Confidence 467788899999988999999877431 2222334455566666665544 68999977653 33467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 90 ~~a~~~Gadavlv~~P~ 106 (291)
T 3tak_A 90 KAAKDLGADAALLVTPY 106 (291)
T ss_dssp HHHHHHTCSEEEEECCC
T ss_pred HHHHhcCCCEEEEcCCC
Confidence 99999999999888644
No 380
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=95.58 E-value=0.092 Score=52.82 Aligned_cols=148 Identities=10% Similarity=-0.009 Sum_probs=97.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCc------cccccccc---cChhHHHHHHHHHhhcc--C
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE------RKMGAAVG---QDCRLLEEVCGWINAKA--T 218 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~------~~~G~~l~---~~~~~v~~iv~~vr~~~--~ 218 (422)
.|+..++. ..+++++.+.++++.+.|+.++-+.++.+..... ........ .+.+...+.++++|+.. +
T Consensus 143 v~~y~~~~-~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~ 221 (421)
T 4hnl_A 143 IPAYTHAV-ADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQ 221 (421)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cceecccC-CCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCC
Confidence 57777775 4678888888888888899999999875432111 00000111 12344556677777776 6
Q ss_pred ccEEEEECCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHH
Q 014581 219 VPVWAKMTPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIA 296 (422)
Q Consensus 219 iPv~vKl~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~ 296 (422)
+.+.+-....++ +..++++.+.+.++..+- +|.+ +..++..++++
T Consensus 222 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~ 268 (421)
T 4hnl_A 222 FQMLHDVHERLHPNQAIQFAKAAEPYQLFFLE----------------DILP-----------------PDQSHWLTQLR 268 (421)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------GGGGGGHHHHH
T ss_pred ceEeccccccCCHHHHHHHHHHhhhhhhcccc----------------cCCc-----------------ccchHHHHHHH
Confidence 788888766554 345677778777776551 2221 11123334566
Q ss_pred HHhhccCCCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhH
Q 014581 297 KMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTG 338 (422)
Q Consensus 297 ~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgta 338 (422)
+.+ ++||.+.--+.+..|+.+++..| +|.||+--.
T Consensus 269 ~~~-------~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 304 (421)
T 4hnl_A 269 SQS-------ATPIATGELFNNPMEWQELVKNRQIDFMRAHVS 304 (421)
T ss_dssp TTC-------CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGG
T ss_pred hcC-------CCCeecCcceehhHHHHHHHhcCCceEEEeCCC
Confidence 554 79999999999999999999987 688887543
No 381
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.58 E-value=0.081 Score=51.65 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=63.7
Q ss_pred hHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC--CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 204 RLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG--SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 204 ~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG--adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
+.+.++++.+++. ..|+.+-+... .+..+.++.+.++| ++.+.+ |.. .| .
T Consensus 81 ~~~~~~i~~~~~~-g~~v~v~~g~~-~~~~~~a~~~~~~g~~~~~i~i-~~~----------------------~G-~-- 132 (336)
T 1ypf_A 81 EKRISFIRDMQSR-GLIASISVGVK-EDEYEFVQQLAAEHLTPEYITI-DIA----------------------HG-H-- 132 (336)
T ss_dssp GGHHHHHHHHHHT-TCCCEEEECCS-HHHHHHHHHHHHTTCCCSEEEE-ECS----------------------SC-C--
T ss_pred HHHHHHHHHHHhc-CCeEEEeCCCC-HHHHHHHHHHHhcCCCCCEEEE-ECC----------------------CC-C--
Confidence 3455666666543 56888775332 23456678889999 888754 211 01 1
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
.+..++.|+.+++.++ ..||+ .|+|.+.+++.++..+|||+|.++
T Consensus 133 ---~~~~~~~i~~lr~~~~------~~~vi-~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 133 ---SNAVINMIQHIKKHLP------ESFVI-AGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp ---SHHHHHHHHHHHHHCT------TSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ---cHHHHHHHHHHHHhCC------CCEEE-ECCcCCHHHHHHHHHcCCCEEEEe
Confidence 1345678888888762 34444 567999999999999999999993
No 382
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.23 Score=47.45 Aligned_cols=85 Identities=21% Similarity=0.190 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 88 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGT---------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFV 88 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHH
Confidence 46788899999998899999986632 13333345555666777666554 689998876542 2467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 89 ~~A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 89 RHAQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999887644
No 383
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.52 E-value=0.14 Score=49.33 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+ ..+..+++
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gtt---------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 103 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTT---------GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLA 103 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc---------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHH
Confidence 467888999999989999999887431 2223334555566666666554 68999977543 23478889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 104 ~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 104 KACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECCCC
Confidence 99999999999888644
No 384
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.49 E-value=0.096 Score=50.11 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHH-hCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHH
Q 014581 160 YNKAAWEELIDRVEE-TGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEP 235 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~-aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~ 235 (422)
.+.+.+.+.++++.+ .|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-...+- .+..++
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~l 91 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGS---------TGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVEL 91 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCcc---------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Confidence 467788899999988 99999988732 13333345555666676666544 689999876642 246788
Q ss_pred HHHHHHcCCCEEEEecCC
Q 014581 236 ARVALRSGSEGVSAINTI 253 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~ 253 (422)
++.+.++|+|++.+....
T Consensus 92 a~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 92 GKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHHTCSEEEEECCC
T ss_pred HHHHHhcCCCEEEECCCC
Confidence 999999999999888654
No 385
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.49 E-value=0.41 Score=45.37 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=62.9
Q ss_pred CCe-EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEEC
Q 014581 149 DKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMT 226 (422)
Q Consensus 149 ~~p-vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~ 226 (422)
+.| +.++|. +.+.++..+.++.+.+.|+|+||+=+-.-.. ..+.+.+.+.+..+|+.. ++|+++-++
T Consensus 38 g~p~i~v~l~-~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~----------~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 38 GAPKIIVSLM-GKTITDVKSEALAYREADFDILEWRVDHFAN----------VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SSCEEEEEEC-CSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT----------TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CCcEEEEEeC-CCCHHHHHHHHHHHhhCCCCEEEEEeccccc----------cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 445 667997 6788888888888877799999997632111 023366888888898887 899999877
Q ss_pred CC-----CC-C---hHHHHHHHHHcC-CCEEEE
Q 014581 227 PN-----IT-D---ITEPARVALRSG-SEGVSA 249 (422)
Q Consensus 227 ~~-----~~-~---~~~~a~~l~~aG-adgi~v 249 (422)
.. +. + -.++.+.+.+.| +|+|.+
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDv 139 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDL 139 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 42 11 1 245667777888 887743
No 386
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.48 E-value=0.13 Score=49.46 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHH
Q 014581 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEP 235 (422)
Q Consensus 159 ~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~ 235 (422)
..+.+.+.+.++++.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-+..+- .+..++
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~Gt---------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~l 99 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVLGT---------TGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKL 99 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSG---------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCcc---------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHH
Confidence 346788899999998899999988742 13333344555566666666544 689999876642 246788
Q ss_pred HHHHHHcCCCEEEEecCCc
Q 014581 236 ARVALRSGSEGVSAINTIM 254 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~ 254 (422)
++.++++|+|++.+.....
T Consensus 100 a~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 100 VKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHHTCSEEEEECCCS
T ss_pred HHHHHhcCCCEEEECCCCC
Confidence 9999999999998886543
No 387
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=95.48 E-value=0.66 Score=45.40 Aligned_cols=167 Identities=15% Similarity=0.166 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHH
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
++++..|.+..++. +.+++.+++ +.+. ++.+++.|+|++.|--. + .++..+++++-+
T Consensus 77 ~e~~~~L~~~~~~~-Gi~~~st~f---D~~s----vd~l~~~~v~~~KI~S~--~-----------~~N~pLL~~va~-- 133 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN-GFKAICTPF---DEES----VDLIEAHGIEIIKIASC--S-----------FTDWPLLERIAR-- 133 (350)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEEC---SHHH----HHHHHHTTCCEEEECSS--S-----------TTCHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHc-CCcEEeccC---CHHH----HHHHHHcCCCEEEECcc--c-----------ccCHHHHHHHHh--
Confidence 45566676666654 889999996 3433 45566778999997532 1 144555554432
Q ss_pred hhccCccEEEEECCC-CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHH
Q 014581 214 NAKATVPVWAKMTPN-ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292 (422)
Q Consensus 214 r~~~~iPv~vKl~~~-~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v 292 (422)
+++||++|.... +.++...++.+.+.|-+-+.++.+..- |.+ ...+-|+.|
T Consensus 134 ---~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~Y----------Pt~---------------~~~~nL~aI 185 (350)
T 3g8r_A 134 ---SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEY----------PTP---------------DDHLHLARI 185 (350)
T ss_dssp ---SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCS----------SCC---------------GGGCCTTHH
T ss_pred ---hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCC----------CCC---------------cccCCHHHH
Confidence 499999996542 112344455566778764443332110 100 012235667
Q ss_pred HHHHHHhhccCCCCCceEEEe----cCCCCHHHHHHHHHhCCCEEEEhhHHHh-h--------hhHHHHHHHHHHHHHHH
Q 014581 293 MSIAKMMKSEFNDKDYSLSGI----GGVETGGDAAEFILLGANTVQVCTGVMM-H--------GYGLVKRLCEELKDFMK 359 (422)
Q Consensus 293 ~~i~~~~~~~~~~~~ipIIa~----GGI~s~~da~~~l~aGAd~V~vgtall~-~--------Gp~~i~~i~~~l~~~m~ 359 (422)
..+++.++ ++||.-+ |+.. .-++.++++||+.|...--+=+ . -|.-++++.++++..-.
T Consensus 186 ~~Lk~~fp------~lpVG~SdHt~g~~~--~~~~AAvAlGA~vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~ 257 (350)
T 3g8r_A 186 KTLRQQYA------GVRIGYSTHEDPDLM--EPIMLAVAQGATVFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALA 257 (350)
T ss_dssp HHHHHHCT------TSEEEEEECCCSSCC--HHHHHHHHTTCCEEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCC------CCCEEcCCCCCCCcc--HHHHHHHHcCCCEEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 77887763 5888665 3332 3346788999998887632221 1 26678888888765433
No 388
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.48 E-value=0.36 Score=51.31 Aligned_cols=108 Identities=18% Similarity=0.151 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhC-CCCeEEEEeC------CCCCHHHHHHHHHHHHHhCCCEEEEccCCCC--CCCccccccccccChhH
Q 014581 135 TMLKEFKQLKALY-PDKILIASIM------EEYNKAAWEELIDRVEETGIDAIEVNFSCPH--GMPERKMGAAVGQDCRL 205 (422)
Q Consensus 135 ~~l~~i~~~k~~~-~~~pvi~si~------~~~~~~~~~~~a~~~~~aGaD~iElN~scP~--~~~~~~~G~~l~~~~~~ 205 (422)
-.++.++.+++.. ++.|+++-+. .+.+.+++.++++.++++|+|+|++..+... ...... . ..+..
T Consensus 193 ~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~---~--~~~~~ 267 (671)
T 1ps9_A 193 FAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIAT---P--VPRGA 267 (671)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSST---T--SCTTT
T ss_pred HHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccc---c--CCcch
Confidence 3455566666654 3778887553 1457788999999999999999998643211 100000 0 01112
Q ss_pred HHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 206 LEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
..+.++.+|+.+++||++ ...+.+ .+.++.+.+.| +|+|.+.
T Consensus 268 ~~~~~~~i~~~~~iPvi~--~Ggi~~-~~~a~~~l~~g~aD~V~~g 310 (671)
T 1ps9_A 268 FSWVTRKLKGHVSLPLVT--TNRIND-PQVADDILSRGDADMVSMA 310 (671)
T ss_dssp THHHHHHHTTSCSSCEEE--CSSCCS-HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHhcCceEEE--eCCCCC-HHHHHHHHHcCCCCEEEeC
Confidence 235677888888999986 344434 45566666776 8988654
No 389
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.43 E-value=0.083 Score=54.15 Aligned_cols=81 Identities=21% Similarity=0.247 Sum_probs=58.8
Q ss_pred ccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH
Q 014581 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298 (422)
Q Consensus 219 iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~ 298 (422)
+.+...+++. ....+.++.+.++|+|.|++.... |. ....++.+.++++.
T Consensus 222 ~~vg~~i~~~-~~~~~~a~~l~~~G~d~ivi~~a~------------------------g~-----~~~~~~~i~~l~~~ 271 (491)
T 1zfj_A 222 LLVAAAVGVT-SDTFERAEALFEAGADAIVIDTAH------------------------GH-----SAGVLRKIAEIRAH 271 (491)
T ss_dssp BCCEEEECSS-TTHHHHHHHHHHHTCSEEEECCSC------------------------TT-----CHHHHHHHHHHHHH
T ss_pred EEEEEeccCc-hhHHHHHHHHHHcCCCeEEEeeec------------------------Cc-----chhHHHHHHHHHHH
Confidence 3444455432 345677899999999999866421 11 12245667777776
Q ss_pred hhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 299 ~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++ ++|++ .|||.+.+++.+++.+||++|.++
T Consensus 272 ~p------~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 272 FP------NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp CS------SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CC------CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 63 68998 899999999999999999999887
No 390
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.42 E-value=1.1 Score=43.48 Aligned_cols=148 Identities=12% Similarity=0.113 Sum_probs=84.1
Q ss_pred CCeEEEEeCCCCC-HHH---HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh-ccCccEEE
Q 014581 149 DKILIASIMEEYN-KAA---WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA-KATVPVWA 223 (422)
Q Consensus 149 ~~pvi~si~~~~~-~~~---~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~-~~~iPv~v 223 (422)
+.|++++=+.+.+ +.. ...+++.+.+.|+.+ . ++. +. ..+ .+++. ....+.+++ ..+.|+++
T Consensus 55 ~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~-~--~~~-~~-------~~l-~~~~~-~~~~~~~~~~~~~~pv~~ 121 (349)
T 1p0k_A 55 SSPIFINAMTGGGGKLTYEINKSLARAASQAGIPL-A--VGS-QM-------SAL-KDPSE-RLSYEIVRKENPNGLIFA 121 (349)
T ss_dssp SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCE-E--CCC-CT-------TTT-TCHHH-HHHHHHHHHHCSSSCEEE
T ss_pred CCceEEcCccccchhhhhHHHHHHHHHHHHcCCcE-E--ecc-ch-------hcc-cCccc-ccceehhhhhCCCceeEE
Confidence 4688777543444 322 345667777788764 2 222 11 011 12211 122222332 34889999
Q ss_pred EECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 224 Kl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
.+..+. +...+.+.+..+|+|+|.+.-..... ..++ . |..-....++.|+++++.+
T Consensus 122 ~i~~~~-~~~~~~~~~~~~gad~i~i~~~~~~~------~~~~----------~---~~~~~~~~~~~i~~vr~~~---- 177 (349)
T 1p0k_A 122 NLGSEA-TAAQAKEAVEMIGANALQIHLNVIQE------IVMP----------E---GDRSFSGALKRIEQICSRV---- 177 (349)
T ss_dssp EEETTC-CHHHHHHHHHHTTCSEEEEEECTTTT------C---------------------CTTHHHHHHHHHHHC----
T ss_pred eecCCC-CHHHHHHHHHhcCCCeEEecccchhh------hcCC----------C---CCcchHHHHHHHHHHHHHc----
Confidence 887543 35566777788999998765432210 0000 0 1100011357778888765
Q ss_pred CCCCceEEEe--cCCCCHHHHHHHHHhCCCEEEEh
Q 014581 304 NDKDYSLSGI--GGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 304 ~~~~ipIIa~--GGI~s~~da~~~l~aGAd~V~vg 336 (422)
++||+.- |...+.+++.++..+|||+|.+.
T Consensus 178 ---~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 178 ---SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp ---SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred ---CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 6888874 55578999999999999999984
No 391
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=95.39 E-value=0.011 Score=56.74 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=24.8
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 307 DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
+++|.++||| +.+.+.++..+|||.+.+|+.+.
T Consensus 249 ~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~ 281 (294)
T 3c2e_A 249 HFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQ 281 (294)
T ss_dssp CCEEEEECCC-CC------CCCSCSEEECGGGTS
T ss_pred CeEEEEECCC-CHHHHHHHHHcCCCEEEEechhc
Confidence 5999999999 89999999999999999999854
No 392
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=95.39 E-value=0.17 Score=51.03 Aligned_cols=93 Identities=22% Similarity=0.203 Sum_probs=56.4
Q ss_pred CCCeEEEEeCC--------CCCHHHHHHHHHHHHH-hCCCEEEEccCCCCC--CCccccccccccChhHHHHHHHHHhhc
Q 014581 148 PDKILIASIME--------EYNKAAWEELIDRVEE-TGIDAIEVNFSCPHG--MPERKMGAAVGQDCRLLEEVCGWINAK 216 (422)
Q Consensus 148 ~~~pvi~si~~--------~~~~~~~~~~a~~~~~-aGaD~iElN~scP~~--~~~~~~G~~l~~~~~~v~~iv~~vr~~ 216 (422)
++.||.+-|.. +.+.+++.++++++++ +|+|+|++....-.. ......|.. .+. ++++.+|+.
T Consensus 241 ~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~--~~~----~~a~~Ik~~ 314 (419)
T 3l5a_A 241 DNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDH--FGR----PVNQIVYEH 314 (419)
T ss_dssp TTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTT--TTS----BHHHHHHHH
T ss_pred CCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcc--ccH----HHHHHHHHH
Confidence 36799988753 4578899999999999 999999987532100 000000100 111 244555555
Q ss_pred c--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 217 A--TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 217 ~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+ ++||++ ...+.+ .+.|+.+.+. +|.|.+.
T Consensus 315 v~~~iPVI~--~GgI~t-~e~Ae~~L~~-aDlVaiG 346 (419)
T 3l5a_A 315 LAGRIPLIA--SGGINS-PESALDALQH-ADMVGMS 346 (419)
T ss_dssp HTTSSCEEE--CSSCCS-HHHHHHHGGG-CSEEEES
T ss_pred cCCCCeEEE--ECCCCC-HHHHHHHHHh-CCcHHHH
Confidence 5 589986 444544 4456666666 9977543
No 393
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.39 E-value=0.081 Score=51.23 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+ ..+..+++
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtT---------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la 110 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTT---------GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELA 110 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc---------cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHH
Confidence 467888999999989999999876321 2233334555566666665544 68999977643 23467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 111 ~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 111 KHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999888644
No 394
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.38 E-value=0.13 Score=49.06 Aligned_cols=87 Identities=21% Similarity=0.153 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHH
Q 014581 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEP 235 (422)
Q Consensus 159 ~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~ 235 (422)
..+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+- .+..++
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~l 87 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTT---------GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIEL 87 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHH
Confidence 3467888999999988999999887431 2233344555566666665544 689999876542 246788
Q ss_pred HHHHHHcCCCEEEEecCCc
Q 014581 236 ARVALRSGSEGVSAINTIM 254 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~ 254 (422)
++.++++|+|++.+.....
T Consensus 88 a~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 88 SVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHHTCSEEEEECCCS
T ss_pred HHHHHhcCCCEEEECCCCC
Confidence 9999999999998886543
No 395
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.38 E-value=0.17 Score=48.30 Aligned_cols=84 Identities=19% Similarity=0.112 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHHH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPAR 237 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a~ 237 (422)
+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-+..+ ..+..++++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~ 91 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTT---------AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASI 91 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGG---------GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc---------cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHH
Confidence 56788889999888999999887421 2223334455556666665543 68999977543 334778899
Q ss_pred HHHHcCCCEEEEecCC
Q 014581 238 VALRSGSEGVSAINTI 253 (422)
Q Consensus 238 ~l~~aGadgi~v~n~~ 253 (422)
.+.++|+|++.+....
T Consensus 92 ~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 92 QAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHTCSEEEEECCC
T ss_pred HHHHcCCCEEEECCCC
Confidence 9999999999888644
No 396
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.37 E-value=0.21 Score=53.33 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=64.9
Q ss_pred HHHHHHHHhhCC-CCeEEEEeC------CCCCHHHHHHHHHHHHHhCCCEEEEccCCCCC--CCccccccccccChhHHH
Q 014581 137 LKEFKQLKALYP-DKILIASIM------EEYNKAAWEELIDRVEETGIDAIEVNFSCPHG--MPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 137 l~~i~~~k~~~~-~~pvi~si~------~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~--~~~~~~G~~l~~~~~~v~ 207 (422)
++.++.+++..+ +.||.+-+. .+.+.+++.++++.+++ ++|+++++.+.-.. .+.+. ..+....
T Consensus 211 ~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~------~~~~~~~ 283 (690)
T 3k30_A 211 RELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRF------APEGRQE 283 (690)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTT------CCTTTTH
T ss_pred HHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCcc------CCccccH
Confidence 344555555443 679998873 24567889999999988 79999998642000 00000 0111224
Q ss_pred HHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+.++.+|+.+++||+. ...+.+ .+.|+.+.+.| +|+|.+.
T Consensus 284 ~~~~~i~~~~~~pvi~--~G~i~~-~~~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 284 EFVAGLKKLTTKPVVG--VGRFTS-PDAMVRQIKAGILDLIGAA 324 (690)
T ss_dssp HHHTTSGGGCSSCEEE--CSCCCC-HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCeEEE--eCCCCC-HHHHHHHHHCCCcceEEEc
Confidence 5677888889999986 455544 44566666666 8988544
No 397
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.36 E-value=0.16 Score=48.71 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++=...+ ..+..+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 95 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTT---------GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALS 95 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc---------cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHH
Confidence 467888899999989999999887431 2223334555566666665544 68999976643 23467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 96 ~~a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECCCC
Confidence 99999999999887644
No 398
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=95.36 E-value=0.14 Score=49.50 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=59.7
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+.++++|+.. ..|+.|=+ ++. +-++.+.++|+|.|-+-|..
T Consensus 219 ~~Av~~ar~~~p~~kIeVEV----dtl-dea~eAl~aGaD~I~LDn~~-------------------------------- 261 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVET----ETL-AELEEAISAGADIIMLDNFS-------------------------------- 261 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEE----SSH-HHHHHHHHTTCSEEEEESCC--------------------------------
T ss_pred HHHHHHHHHhCCCCeEEEEE----CCH-HHHHHHHHcCCCEEEECCCC--------------------------------
Confidence 34455555543 45666632 334 44667778999988765521
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
++.++++++.+.+ +++|.++|||. .+.+.++..+|+|.+.+|+..
T Consensus 262 ---~~~l~~av~~l~~-----~v~ieaSGGIt-~~~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 262 ---LEMMREAVKINAG-----RAALENSGNIT-LDNLKECAETGVDYISVGALT 306 (320)
T ss_dssp ---HHHHHHHHHHHTT-----SSEEEEESSCC-HHHHHHHHTTTCSEEECTHHH
T ss_pred ---HHHHHHHHHHhCC-----CCeEEEECCCC-HHHHHHHHHcCCCEEEECcee
Confidence 1334455555542 79999999995 999999999999999999854
No 399
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.33 E-value=0.09 Score=50.91 Aligned_cols=85 Identities=20% Similarity=0.185 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++=+..+ ..+..+++
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~Gt---------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la 112 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGS---------TGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRA 112 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 46788889999998999999987632 13333344555566776666544 68999976643 23468889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 113 ~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 113 QFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999887644
No 400
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.33 E-value=0.75 Score=43.88 Aligned_cols=186 Identities=11% Similarity=0.069 Sum_probs=104.0
Q ss_pred HHHHHHHhCCCEEEEcc-CCC--CCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC---hHHHHHHHHH
Q 014581 168 LIDRVEETGIDAIEVNF-SCP--HGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD---ITEPARVALR 241 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~-scP--~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~ 241 (422)
.|+.++++|+|+|=+.= +.- .+.+.. ..-..+.+...++.|.+.+++||++=+...+.+ ..+.++.+.+
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~G~pD~-----~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~ 101 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASYAVPDA-----NILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEA 101 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHTTSCTT-----TCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCC-----CCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHH
Confidence 35677788999998751 100 211111 013445666777788888899999988766554 4567788899
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCC----
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE---- 317 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~---- 317 (422)
+|+++|.+=+.... +.. +..++ .|+.+.|.. +.+.+|+.+..... ..++-|+|=..-.
T Consensus 102 aGa~gv~iED~~~~------k~c---------gH~~~-~~k~l~p~~-e~~~kI~Aa~~a~~-~~~~~i~aRtda~~a~~ 163 (290)
T 2hjp_A 102 AGASAIVMEDKTFP------KDT---------SLRTD-GRQELVRIE-EFQGKIAAATAARA-DRDFVVIARVEALIAGL 163 (290)
T ss_dssp HTCSEEEEECBCSS------CCC-----------------CCBCCHH-HHHHHHHHHHHHCS-STTSEEEEEECTTTTTC
T ss_pred hCCeEEEEcCCCCC------ccc---------ccccc-CCCcccCHH-HHHHHHHHHHHhcc-cCCcEEEEeehHhhccc
Confidence 99999987764321 000 01111 145666765 23444544432211 0256677654433
Q ss_pred CHHH----HHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHH---H---HHHcCCCCHHHhhcCC-cccCC
Q 014581 318 TGGD----AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKD---F---MKMHNFSSIEDFRGAS-IEYFT 378 (422)
Q Consensus 318 s~~d----a~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~---~---m~~~G~~si~d~~G~~-~~~~~ 378 (422)
..++ +..+..+|||+|.+=..+ .. +..++++.+.+.. . |-+...-+.+|+.... ...+.
T Consensus 164 g~~~ai~Ra~ay~eAGAd~i~~e~~~-~~-~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~ 233 (290)
T 2hjp_A 164 GQQEAVRRGQAYEEAGADAILIHSRQ-KT-PDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVI 233 (290)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCC-SS-SHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEE
T ss_pred cHHHHHHHHHHHHHcCCcEEEeCCCC-CC-HHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEE
Confidence 1344 446667899999885522 11 4667777777641 0 1112234677777665 44443
No 401
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=95.31 E-value=0.062 Score=51.24 Aligned_cols=87 Identities=10% Similarity=0.065 Sum_probs=60.1
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+.++.+|+.. .+||.|- +++. +-++.+.++|+|.|-+-|..
T Consensus 186 ~~Av~~ar~~~~~~~IeVE----v~tl-~ea~eAl~aGaD~I~LDn~~-------------------------------- 228 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVE----VTNL-DELNQAIAAKADIVMLDNFS-------------------------------- 228 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEE----ESSH-HHHHHHHHTTCSEEEEESCC--------------------------------
T ss_pred HHHHHHHHhhCCCCcEEEE----eCCH-HHHHHHHHcCCCEEEEcCCC--------------------------------
Confidence 34445555442 5677773 3344 45677788999999776521
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
| +.++++.+.+.+ +++|.++||| +.+.+.++..+|+|.+.+|+..
T Consensus 229 ~---~~l~~av~~~~~-----~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 229 G---EDIDIAVSIARG-----KVALEVSGNI-DRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp H---HHHHHHHHHHTT-----TCEEEEESSC-CTTTHHHHHTTTCSEEECSHHH
T ss_pred H---HHHHHHHHhhcC-----CceEEEECCC-CHHHHHHHHHcCCCEEEEChhh
Confidence 1 234455555532 7999999999 5999999999999999998754
No 402
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=95.27 E-value=0.27 Score=46.43 Aligned_cols=93 Identities=17% Similarity=0.099 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
+++-++.+++++++. +.|++-.+. ++... +.+.+ .+|.+.|--. ..++.+.+ ++
T Consensus 60 ~~~GL~~l~~~~~e~-Glp~~te~~---d~~~~----~~l~~-~vd~~~IgA~-------------~~rn~~ll----~~ 113 (267)
T 2nwr_A 60 LEYGVKALRKVKEEF-GLKITTDIH---ESWQA----EPVAE-VADIIQIPAF-------------LCRQTDLL----LA 113 (267)
T ss_dssp HHHHHHHHHHHHHHH-CCEEEEECS---SGGGH----HHHHT-TCSEEEECGG-------------GTTCHHHH----HH
T ss_pred HHHHHHHHHHHHHhc-CCeEEEecC---CHHhH----HHHHh-cCCEEEECcc-------------cccCHHHH----HH
Confidence 667777777776654 889999986 33332 23344 5899987531 12334444 44
Q ss_pred HhhccCccEEEEECC--CCCChHHHHHHHHHcCCCEEEEecC
Q 014581 213 INAKATVPVWAKMTP--NITDITEPARVALRSGSEGVSAINT 252 (422)
Q Consensus 213 vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGadgi~v~n~ 252 (422)
+. .+++||++|-.. ++.++...+..+...|-.-+++.-+
T Consensus 114 ~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~r 154 (267)
T 2nwr_A 114 AA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTER 154 (267)
T ss_dssp HH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEEC
T ss_pred HH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 42 359999999764 3446777788888899866666654
No 403
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.27 E-value=0.15 Score=48.73 Aligned_cols=85 Identities=21% Similarity=0.185 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 88 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTT---------GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLT 88 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 467788899999988999999887431 2233334455566666666544 689998876542 2467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 89 ~~A~~~Gadavlv~~P~ 105 (294)
T 2ehh_A 89 AHAKEVGADGALVVVPY 105 (294)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999887644
No 404
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.26 E-value=0.17 Score=48.65 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la 104 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTT---------GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELA 104 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT---------TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHH
Confidence 467788899999989999999887431 2222234455556666665544 689999876542 3467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 105 ~~A~~~Gadavlv~~P~ 121 (304)
T 3cpr_A 105 EAAASAGADGLLVVTPY 121 (304)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999887644
No 405
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.25 E-value=0.14 Score=50.12 Aligned_cols=86 Identities=20% Similarity=0.241 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-+..+- .+..+++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la 119 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSG---------GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELS 119 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 467788899999989999999887431 2233344555566676666554 689999876532 3467889
Q ss_pred HHHHHcCCCEEEEecCCc
Q 014581 237 RVALRSGSEGVSAINTIM 254 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~~ 254 (422)
+.++++|+|++.+.....
T Consensus 120 ~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 120 QHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTCSEEEEECCSS
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 999999999998886543
No 406
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=95.22 E-value=2.9 Score=41.94 Aligned_cols=101 Identities=13% Similarity=0.079 Sum_probs=50.3
Q ss_pred CceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHH
Q 014581 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLK 138 (422)
Q Consensus 59 Pi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~ 138 (422)
+++...|.+ ++-..+.+.++||-++-+-+...... +.....|++..++++ .++.++
T Consensus 61 ~~l~~~ga~--D~~sA~~~~~aGf~Aiy~SG~~vAa~-------------------~~~~~~G~PD~~~~~---~~ev~~ 116 (433)
T 3eol_A 61 DFVNALGAL--SGNQAMQMVRAGLKAIYLSGWQVAAD-------------------ANTASAMYPDQSLYP---ANAGPE 116 (433)
T ss_dssp SCEEEEBCS--SHHHHHHHHHTTCCCEEEC---------------------------------------------CHHHH
T ss_pred CCEEeCCCC--cHHHHHHHHHhCCCEEEechHHHHhc-------------------cchhcCCCCCCccCC---HHHHHH
Confidence 444555554 57777778888987776554332110 000123455544443 344444
Q ss_pred HHHHHHhhC------------------CCCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEc
Q 014581 139 EFKQLKALY------------------PDKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVN 183 (422)
Q Consensus 139 ~i~~~k~~~------------------~~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN 183 (422)
.++++.+.. ...||++-+-.|+ +.....+.++.++++|+.+|.|.
T Consensus 117 ~v~rI~~a~~~~d~~~~~~~~~~~~~d~~lPIiaD~DtGfG~~~nv~rtVk~~~~AGaAGi~IE 180 (433)
T 3eol_A 117 LAKRINRTLQRADQIETAEGKGLSVDTWFAPIVADAEAGFGDPLDAFEIMKAYIEAGAAGVHFE 180 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSSSCSCCCEEEECC---CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhhhhhhhhcccccccCCCCCeEEECCCCCCCcHHHHHHHHHHHHcCCeEEEEe
Confidence 443332210 1589999886554 34467788999999999999885
No 407
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=95.21 E-value=0.41 Score=47.66 Aligned_cols=152 Identities=7% Similarity=-0.018 Sum_probs=96.2
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc---CccEEEEEC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA---TVPVWAKMT 226 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~---~iPv~vKl~ 226 (422)
.|+.+++. ..+++++.+.++.+.+.|+..+-+.++++. ++.-.+.+++||+.. +++|.|..+
T Consensus 154 v~~y~s~~-~~~~e~~~~~a~~~~~~G~~~~KlKvg~~~--------------~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATG-IGQPDEIARIAAEKVAEGFPRLQIKIGGRP--------------VEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEEC-SCCHHHHHHHHHHHHHTTCSEEEEECCSSC--------------HHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEEeEEcC-CCCHHHHHHHHHHHHHcCCcEEEEcCCCCC--------------HHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 45667775 457888888888887789999999986532 223344566666543 678999887
Q ss_pred CCCCC--hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 227 PNITD--ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 227 ~~~~~--~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..++- ..++++.+.+.++ .| | +|.. .++..+++++..
T Consensus 219 ~~w~~~~A~~~~~~L~~~~i-~i--------------E--eP~~-------------------~~~~~~~l~~~~----- 257 (391)
T 4e8g_A 219 RSLPSRDALRLSRECPEIPF-VL--------------E--QPCN-------------------TLEEIAAIRGRV----- 257 (391)
T ss_dssp TCCCHHHHHHHHHHCTTSCE-EE--------------E--SCSS-------------------SHHHHHHHGGGC-----
T ss_pred CCCCHHHHHHHHHHHhhcCe-EE--------------e--cCCc-------------------cHHHHHHHHhhC-----
Confidence 76641 2344444544443 22 1 2210 123344555544
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||.+.--+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+++|+.
T Consensus 258 --~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~-GGit~~~~i----a~~A~~~gi~ 311 (391)
T 4e8g_A 258 --QHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRI-GGLQQMAAF----RDICEARALP 311 (391)
T ss_dssp --CSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHH----HHHHHHTTCC
T ss_pred --CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCe
Confidence 79999999999999999999876 78999865543 233333333 3345566664
No 408
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.20 E-value=0.36 Score=43.60 Aligned_cols=162 Identities=13% Similarity=0.031 Sum_probs=93.8
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEE
Q 014581 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVS 248 (422)
Q Consensus 169 a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~ 248 (422)
++.+.++|+|++=+.+. |.++ |. -+++..+++.+++... -.+|.|-... +..++.+.+.+.+.|.|-
T Consensus 14 a~~a~~~GaD~iGfif~-~~Sp--R~------V~~~~a~~i~~~~~~~-~~~VgVfvn~---~~~~i~~~~~~~~ld~vQ 80 (203)
T 1v5x_A 14 ALLAEALGAFALGFVLA-PGSR--RR------IAPEAARAIGEALGPF-VVRVGVFRDQ---PPEEVLRLMEEARLQVAQ 80 (203)
T ss_dssp HHHHHHHTCSEEEEECC-TTCT--TB------CCHHHHHHHHHHSCSS-SEEEEEESSC---CHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEEEec-CCCC--Cc------CCHHHHHHHHHhCCCC-CCEEEEEeCC---CHHHHHHHHHhhCCCEEE
Confidence 45556779999999874 5442 21 3567788887766432 2345554333 467778888899999999
Q ss_pred EecCCcc------------cccccccCCCCC------CCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceE
Q 014581 249 AINTIMS------------VMGIDLKTLRPE------PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSL 310 (422)
Q Consensus 249 v~n~~~~------------~~~id~e~~~p~------~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipI 310 (422)
+|+.... ...+.+...... ....-+.+..|=+|... .+..+..+.. . +.|+
T Consensus 81 LHG~e~~~~~~~l~~~~~vika~~v~~~~~l~~~~~~~d~~LlD~~~gGtG~~f---dW~~l~~~~~-~-------~~p~ 149 (203)
T 1v5x_A 81 LHGEEPPEWAEAVGRFYPVIKAFPLEGPARPEWADYPAQALLLDGKRPGSGEAY---PRAWAKPLLA-T-------GRRV 149 (203)
T ss_dssp ECSCCCHHHHHHHTTTSCEEEEEECSSSCCGGGGGSSCSEEEEECSSTTSCCCC---CGGGGHHHHH-T-------TSCE
T ss_pred ECCCCCHHHHHHhccCCCEEEEEEcCChHhhhhhhcCCCEEEEcCCCCCCCCcc---CHHHHHhhhc-c-------CCcE
Confidence 9874211 011111111000 00000011112245433 2333333211 1 5799
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEhhHHHhh-h---hHHHHHHHHHHH
Q 014581 311 SGIGGVETGGDAAEFILLGANTVQVCTGVMMH-G---YGLVKRLCEELK 355 (422)
Q Consensus 311 Ia~GGI~s~~da~~~l~aGAd~V~vgtall~~-G---p~~i~~i~~~l~ 355 (422)
+..||+ +++.+.+++..++.+|-+.|++-.. | +..++++.+.++
T Consensus 150 ~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r 197 (203)
T 1v5x_A 150 ILAGGI-APENLEEVLALRPYALDLASGVEEAPGVKSAEKLRALFARLA 197 (203)
T ss_dssp EECSSC-CSTTHHHHHHHCCSEEEESGGGEEETTEECHHHHHHHHHHHH
T ss_pred EEECCC-CHHHHHHHHhcCCCEEEeCCceecCCCCcCHHHHHHHHHHHH
Confidence 999999 5999988886699999999999852 2 445555555544
No 409
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.19 E-value=0.16 Score=48.43 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC------CCCCCCc---ccccccccc-C
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS------CPHGMPE---RKMGAAVGQ-D 202 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s------cP~~~~~---~~~G~~l~~-~ 202 (422)
.+.+.+.++.+++.. +.||++-+..+. .+..++++.++++|+|+|.+--. .+.+... ...|+.-+. .
T Consensus 149 ~~~~~eii~~v~~~~-~~pv~vk~~~~~--~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~ 225 (311)
T 1ep3_A 149 PEVAAALVKACKAVS-KVPLYVKLSPNV--TDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAI 225 (311)
T ss_dssp HHHHHHHHHHHHHHC-SSCEEEEECSCS--SCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGG
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEECCCh--HHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccc
Confidence 445556667777655 789998775222 24456788899999999998210 1111000 000111111 1
Q ss_pred hhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 203 ~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
.....+.++.+++.+++||++ ...+.+... +..+.++|||+|.+.
T Consensus 226 ~~~~~~~i~~i~~~~~ipvia--~GGI~~~~d-~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 226 KPVALKLIHQVAQDVDIPIIG--MGGVANAQD-VLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHHHHHTTCSSCEEE--CSSCCSHHH-HHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCEEE--ECCcCCHHH-HHHHHHcCCCEEEEC
Confidence 112346777788888999986 555655444 555556899998655
No 410
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.19 E-value=0.21 Score=45.79 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEe---CCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASI---MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEV 209 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si---~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~i 209 (422)
.+.+.++++.+++..+ |+++-+ ..+.+.++..++++.++++|+|+|.+|.+- ..| +.+.+.++.+
T Consensus 101 ~~~~~~~i~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~-------~~g---ga~~~~i~~v 168 (225)
T 1mzh_A 101 YDFVVEELKEIFRETP--SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGF-------APR---GTTLEEVRLI 168 (225)
T ss_dssp HHHHHHHHHHHHHTCT--TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSC-------SSS---CCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc--CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCC-------CCC---CCCHHHHHHH
Confidence 4566777888887653 777766 445677888999999999999999666421 001 1233444444
Q ss_pred HHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEE
Q 014581 210 CGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGV 247 (422)
Q Consensus 210 v~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi 247 (422)
.+.+. .++|| |.+.++.+.. -+..+.++|+|.|
T Consensus 169 ~~~v~--~~ipV--ia~GGI~t~~-da~~~l~aGA~~i 201 (225)
T 1mzh_A 169 KSSAK--GRIKV--KASGGIRDLE-TAISMIEAGADRI 201 (225)
T ss_dssp HHHHT--TSSEE--EEESSCCSHH-HHHHHHHTTCSEE
T ss_pred HHHhC--CCCcE--EEECCCCCHH-HHHHHHHhCchHH
Confidence 43331 14555 5567776654 4555556999954
No 411
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.18 E-value=0.25 Score=47.94 Aligned_cols=124 Identities=13% Similarity=0.073 Sum_probs=81.0
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCC-CEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGa-D~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~ 227 (422)
+.|++..=|.+.+.. +++..+.++|+ ..+.. +. .+++.+.+.++.+++.++.|+.|-+-.
T Consensus 12 ~~Pii~apM~g~s~~---~la~av~~aG~lG~i~~----~~------------~~~~~~~~~i~~i~~~~~~p~gvnl~~ 72 (332)
T 2z6i_A 12 DYPIFQGGMAWVADG---DLAGAVSKAGGLGIIGG----GN------------APKEVVKANIDKIKSLTDKPFGVNIML 72 (332)
T ss_dssp SSSEEECCCTTTCCH---HHHHHHHHHTSBEEEEC----TT------------CCHHHHHHHHHHHHHHCCSCEEEEECT
T ss_pred CCCEEeCCCCCCCcH---HHHHHHHhCCCcEEeCC----CC------------CCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 457665444343332 34555666776 44432 11 245667788888888778899988764
Q ss_pred CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCC
Q 014581 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKD 307 (422)
Q Consensus 228 ~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ 307 (422)
.-.+..+.++.+.++|+|+|.++... | .+.++.+++. +
T Consensus 73 ~~~~~~~~~~~a~~~g~d~V~~~~g~--------------------------------p--~~~i~~l~~~--------g 110 (332)
T 2z6i_A 73 LSPFVEDIVDLVIEEGVKVVTTGAGN--------------------------------P--SKYMERFHEA--------G 110 (332)
T ss_dssp TSTTHHHHHHHHHHTTCSEEEECSSC--------------------------------G--GGTHHHHHHT--------T
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCC--------------------------------h--HHHHHHHHHc--------C
Confidence 22346778899999999999765421 1 0123344432 5
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 308 YSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 308 ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
+||+.. |.+.+++.++..+|+|+|.+
T Consensus 111 ~~v~~~--v~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 111 IIVIPV--VPSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp CEEEEE--ESSHHHHHHHHHTTCSCEEE
T ss_pred CeEEEE--eCCHHHHHHHHHcCCCEEEE
Confidence 777753 78999999999999999988
No 412
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=95.17 E-value=0.76 Score=43.77 Aligned_cols=175 Identities=14% Similarity=0.146 Sum_probs=102.2
Q ss_pred HHHHHHHhhCCCCeEE-EEeCCCCCHHHHHHHHHHHHHhCCCEEEEccC--------CCCCCCccccccccccChhHHHH
Q 014581 138 KEFKQLKALYPDKILI-ASIMEEYNKAAWEELIDRVEETGIDAIEVNFS--------CPHGMPERKMGAAVGQDCRLLEE 208 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi-~si~~~~~~~~~~~~a~~~~~aGaD~iElN~s--------cP~~~~~~~~G~~l~~~~~~v~~ 208 (422)
..++++++. +.|+. ... ++.- .|+.++++|+|+|=+.=+ -|.+ ..-..+.+..
T Consensus 11 ~~lr~l~~~--~~~i~~~~a---~D~~----sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~---------~~vt~~em~~ 72 (287)
T 3b8i_A 11 AMFRALLDS--SRCYHTASV---FDPM----SARIAADLGFECGILGGSVASLQVLAAPDF---------ALITLSEFVE 72 (287)
T ss_dssp HHHHHHHHS--SCCEECEEC---CSHH----HHHHHHHTTCSCEEECHHHHHHHHHSCCSS---------SCSCHHHHHH
T ss_pred HHHHHHHhC--CCcEEEecC---CCHH----HHHHHHHcCCCEEEeCcHHHHHHhcCCCCC---------CCCCHHHHHH
Confidence 456666653 33433 333 4432 356777889999977521 2221 0124456667
Q ss_pred HHHHHhhccCccEEEEECCCCCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 209 VCGWINAKATVPVWAKMTPNITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 209 iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.++.|.+.+++||++=+...+.+ ..+.++.+.++|+++|.+=+.... + ..|-..|+ +.
T Consensus 73 ~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~p------K------------rcgh~~gk-l~ 133 (287)
T 3b8i_A 73 QATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLP------A------------QFGRKSTD-LI 133 (287)
T ss_dssp HHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCS------C------------CTTTCTTC-BC
T ss_pred HHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCc------c------------ccCCCCCC-cc
Confidence 77778888899999988765554 456678888999999987764321 0 11233455 55
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCC--C----CHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGV--E----TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI--~----s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
|.. +.+.+|+....... ..++-|+|=..- . .-+++..+..+|||+|.+=. +.. +..++++.+.+
T Consensus 134 ~~~-e~~~~I~aa~~a~~-~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~--~~~-~~~~~~i~~~~ 203 (287)
T 3b8i_A 134 CVE-EGVGKIRAALEARV-DPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVG--VRD-FAHLEAIAEHL 203 (287)
T ss_dssp CHH-HHHHHHHHHHHHCC-STTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEEC--CCS-HHHHHHHHTTC
T ss_pred CHH-HHHHHHHHHHHcCC-CCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecC--CCC-HHHHHHHHHhC
Confidence 554 34555555543221 125667764322 1 23455567789999998864 222 45666666654
No 413
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=95.16 E-value=0.51 Score=47.18 Aligned_cols=111 Identities=6% Similarity=-0.033 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCC---------CCHHHHHHHHHHHHHhC------CCEEEEccCCCCCCCccccccc
Q 014581 134 ETMLKEFKQLKALYPDKILIASIMEE---------YNKAAWEELIDRVEETG------IDAIEVNFSCPHGMPERKMGAA 198 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~~---------~~~~~~~~~a~~~~~aG------aD~iElN~scP~~~~~~~~G~~ 198 (422)
.-.++.++.+++..++.||.+-|... .+.+++.+++++++++| +|+|++.-..-........ ..
T Consensus 222 rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~-~~ 300 (402)
T 2hsa_B 222 KFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEA-GR 300 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSS-TT
T ss_pred HHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCcc-cc
Confidence 33455566676655434899887521 13467889999999999 9999996432110000000 00
Q ss_pred cccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 199 l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+ .....-.+.++.+|+.+++||++ ...+ + .+.++.+.+.| +|+|.+.
T Consensus 301 ~-~~~~~~~~~~~~vk~~~~iPvi~--~G~i-~-~~~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 301 L-GSEEEEARLMRTLRNAYQGTFIC--SGGY-T-RELGIEAVAQGDADLVSYG 348 (402)
T ss_dssp T-THHHHHHHHHHHHHHHCSSCEEE--ESSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred c-cCCcchHHHHHHHHHHCCCCEEE--eCCC-C-HHHHHHHHHCCCCceeeec
Confidence 0 00111246677888888999986 3555 4 45666666666 8988654
No 414
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.14 E-value=0.14 Score=48.90 Aligned_cols=85 Identities=22% Similarity=0.180 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-+..+- .+..+++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la 89 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGT---------TGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMS 89 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHH
Confidence 46677888999888899999988742 13333344555566666666544 689999876642 2467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 90 ~~a~~~Gadavlv~~P~ 106 (291)
T 3a5f_A 90 KWAESIGVDGLLVITPY 106 (291)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHhcCCCEEEEcCCC
Confidence 99999999999887654
No 415
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.14 E-value=0.17 Score=48.79 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++=...+ ..+..+++
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 102 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGS---------NGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMT 102 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSG---------GGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHH
Confidence 46778888999998899999988742 13333345566667777777665 68999976543 23467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 103 ~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 103 VSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999887544
No 416
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=95.14 E-value=0.7 Score=45.42 Aligned_cols=153 Identities=10% Similarity=0.034 Sum_probs=96.3
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNI 229 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~ 229 (422)
|+.+++. ..+++++.+.++.+.+.|+..+-+.++.. +++.-.+.+++||+.. +.++.+-.+..+
T Consensus 134 ~~~~~~~-~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~--------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~ 198 (365)
T 3ik4_A 134 ETDMTIT-AGDEVHAAASAKAILARGIKSIKVKTAGV--------------DVAYDLARLRAIHQAAPTAPLIVDGNCGY 198 (365)
T ss_dssp EBCEEEC-CSCHHHHHHHHHHHHHTTCCCEEEECCSS--------------CHHHHHHHHHHHHHHSSSCCEEEECTTCC
T ss_pred eeeEEec-CCCHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 4455664 45788888888877778999999987522 1333445566666654 567777766555
Q ss_pred C--ChHHHHHHH--HHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 230 T--DITEPARVA--LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 230 ~--~~~~~a~~l--~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
+ +..++++.+ .+.++..|- +|.+ +..++..+++++..
T Consensus 199 ~~~~A~~~~~~L~~~~~~i~~iE----------------eP~~-----------------~~d~~~~~~l~~~~------ 239 (365)
T 3ik4_A 199 DVERALAFCAACKAESIPMVLFE----------------QPLP-----------------REDWAGMAQVTAQS------ 239 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHS------
T ss_pred CHHHHHHHHHHHhhCCCCceEEE----------------CCCC-----------------cccHHHHHHHHhhC------
Confidence 4 234556666 333333221 2321 11234455677765
Q ss_pred CCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 306 KDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 306 ~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++||.+.--+.+..|+.+++..| +|.||+=-.. .|..-..++. .+.+.+|+.
T Consensus 240 -~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~--GGit~~~~i~----~~A~~~gi~ 292 (365)
T 3ik4_A 240 -GFAVAADESARSAHDVLRIAREGTASVINIKLMK--AGVAEGLKMI----AIAQAAGLG 292 (365)
T ss_dssp -SSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH--HCHHHHHHHH----HHHHHHTCE
T ss_pred -CCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc--cCHHHHHHHH----HHHHHcCCe
Confidence 79999999999999999999876 7899987655 5554444433 344455553
No 417
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.13 E-value=0.15 Score=48.70 Aligned_cols=85 Identities=20% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 89 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTT---------GESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLT 89 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHH
Confidence 467788899999988999999887431 2233344555566666665544 689998876542 2467888
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 90 ~~a~~~Gadavlv~~P~ 106 (292)
T 2ojp_A 90 QRFNDSGIVGCLTVTPY 106 (292)
T ss_dssp HHTTTSSCSEEEEECCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 99999999999887644
No 418
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.11 E-value=0.048 Score=52.76 Aligned_cols=103 Identities=14% Similarity=0.204 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
.+...+.++.+++.. +.||++-+..+.+.++..+++++++++|+|+|.++-..... .+.. ..+. +.+..
T Consensus 111 ~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~----~~~~--~~~~----~~i~~ 179 (318)
T 1vhn_A 111 LRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQ----SFTG--RAEW----KALSV 179 (318)
T ss_dssp HHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTT----TTSS--CCCG----GGGGG
T ss_pred HHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccc----cCCC--CcCH----HHHHH
Confidence 445555666777665 58999877544443333488999999999999997432110 0100 0111 34556
Q ss_pred HhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 213 INAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 213 vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+++ ++||++ +.++.+.....+.+.+.|+|+|.+.
T Consensus 180 i~~--~ipVi~--~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 180 LEK--RIPTFV--SGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp SCC--SSCEEE--ESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred HHc--CCeEEE--ECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 666 899986 4666666666666665899998544
No 419
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=95.08 E-value=0.46 Score=45.13 Aligned_cols=167 Identities=15% Similarity=0.110 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
+++.++.+++++++. +.|++-.+. ++.. ++.+.+. +|.+.|--. ..++.+.++++
T Consensus 71 l~~gl~~l~~~~~~~-Gl~~~te~~---d~~~----~~~l~~~-~d~~kIga~-------------~~~n~~ll~~~--- 125 (280)
T 2qkf_A 71 LEEGLKIFEKVKAEF-GIPVITDVH---EPHQ----CQPVAEV-CDVIQLPAF-------------LARQTDLVVAM--- 125 (280)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEECC---SGGG----HHHHHHH-CSEEEECGG-------------GTTBHHHHHHH---
T ss_pred hHHHHHHHHHHHHHc-CCcEEEecC---CHHH----HHHHHhh-CCEEEECcc-------------cccCHHHHHHH---
Confidence 577777788776655 889999996 2332 2334455 799987521 12334444443
Q ss_pred HhhccCccEEEEECC--CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHH
Q 014581 213 INAKATVPVWAKMTP--NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290 (422)
Q Consensus 213 vr~~~~iPv~vKl~~--~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~ 290 (422)
. .+++||++|-.. ++.++...+..+...|-.-+++.-+... . ++.- .-..++
T Consensus 126 -a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~-~--------------------~~~~---~~~dl~ 179 (280)
T 2qkf_A 126 -A-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSS-F--------------------GYDN---LVVDML 179 (280)
T ss_dssp -H-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE-C--------------------STTC---EECCTT
T ss_pred -H-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-C--------------------CCCc---cccCHH
Confidence 2 359999999764 3446677778888899866666654321 0 0000 001234
Q ss_pred HHHHHHHHhhccCCCCCceEEEe-----------cCCCCH------HHHHHHHHhCCCEEEEhhHHH-----hhh-----
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGI-----------GGVETG------GDAAEFILLGANTVQVCTGVM-----MHG----- 343 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~-----------GGI~s~------~da~~~l~aGAd~V~vgtall-----~~G----- 343 (422)
.+..+++... ++||+.. ||-..+ .-+..++.+||++++|=+-+- .+|
T Consensus 180 ~i~~lk~~~~------~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~ 253 (280)
T 2qkf_A 180 GFGVMKQTCG------NLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALP 253 (280)
T ss_dssp HHHHHHHHTT------TCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------
T ss_pred HHHHHHHhCC------CCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCC
Confidence 5666776642 5788873 333333 334556678999998876543 111
Q ss_pred hHHHHHHHHHHHH
Q 014581 344 YGLVKRLCEELKD 356 (422)
Q Consensus 344 p~~i~~i~~~l~~ 356 (422)
|.-++++.++++.
T Consensus 254 p~~l~~lv~~i~~ 266 (280)
T 2qkf_A 254 LHLLEDFLIRIKA 266 (280)
T ss_dssp CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3445666666553
No 420
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=95.07 E-value=2.4 Score=40.17 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc-cChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG-QDCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~-~~~~~v~~iv~ 211 (422)
.++..+.++.+.+...+ |++.++ +.+.++-.+.++.++++|+|++-+- .|... . .+.+.+.+..+
T Consensus 51 ~eEr~~v~~~~~~~~~g--ViaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~s~~~l~~~f~ 116 (288)
T 2nuw_A 51 KDEKRQNLNALYDVTHK--LIFQVG-SLNLNDVMELVKFSNEMDILGVSSH--SPYYF---------PRLPEKFLAKYYE 116 (288)
T ss_dssp HHHHHHHHHHHTTTCSC--EEEECC-CSCHHHHHHHHHHHHTSCCSEEEEC--CCCSS---------CSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--eEEeeC-CCCHHHHHHHHHHHHhcCCCEEEEc--CCcCC---------CCCCHHHHHHHHH
Confidence 56666667776665434 888986 5677888999999999999999764 34421 1 24466778888
Q ss_pred HHhhccCccEEEEECC
Q 014581 212 WINAKATVPVWAKMTP 227 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~ 227 (422)
.|.+.+++||++--.|
T Consensus 117 ~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 117 EIARISSHSLYIYNYP 132 (288)
T ss_dssp HHHHHCCSCEEEEECH
T ss_pred HHHHhcCCCEEEEECc
Confidence 8888889999997654
No 421
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=95.07 E-value=0.058 Score=51.49 Aligned_cols=93 Identities=16% Similarity=0.166 Sum_probs=62.1
Q ss_pred HHHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCC
Q 014581 206 LEEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283 (422)
Q Consensus 206 v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~ 283 (422)
+.+.++.+|+.. .++|.|= +.+ .+-++.+.++|+|.|.+-|..
T Consensus 179 i~~av~~ar~~~~~~~~I~VE----V~t-leea~eA~~aGaD~I~LDn~~------------------------------ 223 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVE----VEN-LEDALRAVEAGADIVMLDNLS------------------------------ 223 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEE----ESS-HHHHHHHHHTTCSEEEEESCC------------------------------
T ss_pred HHHHHHHHHHhCCCCceEEEE----eCC-HHHHHHHHHcCCCEEEECCCC------------------------------
Confidence 445566666654 2577773 233 355677788999998777621
Q ss_pred cchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHh
Q 014581 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341 (422)
Q Consensus 284 i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~ 341 (422)
| +.++++.+.+.+.. .+++|.++||| +.+.+.++..+|+|.+.+|+....
T Consensus 224 --~---e~l~~av~~l~~~~--~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~s 273 (285)
T 1o4u_A 224 --P---EEVKDISRRIKDIN--PNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQ 273 (285)
T ss_dssp --H---HHHHHHHHHHHHHC--TTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSS
T ss_pred --H---HHHHHHHHHhhccC--CCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcC
Confidence 1 12223333332211 16899999999 489999999999999999996653
No 422
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=95.07 E-value=0.3 Score=46.40 Aligned_cols=156 Identities=15% Similarity=0.130 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcccccccccc-ChhHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQ-DCRLLEEVCG 211 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~-~~~~v~~iv~ 211 (422)
.++..+.++.+.+ ..||++.++ +.+.++-.+.++.++++|+|++-+- .|... .. +.+.+.+..+
T Consensus 49 ~~Er~~v~~~~~~---rvpviaGvg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~---------~~~~~~~l~~~f~ 113 (283)
T 2pcq_A 49 PEERARGLRALRP---RKPFLVGLM-EETLPQAEGALLEAKAAGAMALLAT--PPRYY---------HGSLGAGLLRYYE 113 (283)
T ss_dssp HHHHHHHHHTCCC---SSCCEEEEC-CSSHHHHHHHHHHHHHHTCSEEEEC--CCCTT---------GGGTTTHHHHHHH
T ss_pred HHHHHHHHHHHHh---CCcEEEeCC-CCCHHHHHHHHHHHHhcCCCEEEec--CCcCC---------CCCCHHHHHHHHH
Confidence 5666665655544 579999996 5677888999999999999999754 34421 11 3356777778
Q ss_pred HHhhccCccEEEEECCCC---CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH
Q 014581 212 WINAKATVPVWAKMTPNI---TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~~~~---~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a 288 (422)
.|.+ ++||++--.|.. .-..+...++.+. ..|+.+- | ..|.
T Consensus 114 ~va~--~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK--------d--------------ssgd---------- 157 (283)
T 2pcq_A 114 ALAE--KMPLFLYHVPQNTKVDLPLEAVEALAPH--PNVLGIK--------D--------------SSGD---------- 157 (283)
T ss_dssp HHHH--HSCEEEEECHHHHCCCCCHHHHHHHTTS--TTEEEEE--------E--------------CSCC----------
T ss_pred HHhc--CCCEEEEeCccccCcCCCHHHHHHHhcC--CCEEEEE--------E--------------CCCC----------
Confidence 8877 899998765421 1123444444332 2232110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHH
Q 014581 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351 (422)
Q Consensus 289 l~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~ 351 (422)
+..+.++.+ .++ ++.|+ +|. -..+..++.+||+++..+++-+. |..+.++.
T Consensus 158 ~~~~~~~~~-~~~-----~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~--P~~~~~l~ 208 (283)
T 2pcq_A 158 LSRIAFYQA-RLQ-----EFRVY-TGH---APTFLGALALGAEGGILAAANLA--PRAYRALL 208 (283)
T ss_dssp HHHHHHHHH-HCS-----SCEEE-ECC---GGGHHHHHHTTCCEEECGGGGTC--HHHHHHHH
T ss_pred HHHHHHHHh-cCC-----CEEEE-ECc---HHHHHHHHHcCCCEEEeCHHHhC--HHHHHHHH
Confidence 233444555 432 55554 332 23467888999999998877653 44444443
No 423
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.06 E-value=0.13 Score=49.51 Aligned_cols=85 Identities=20% Similarity=0.235 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc---CccEEEEECCC-CCChHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA---TVPVWAKMTPN-ITDITEP 235 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~---~iPv~vKl~~~-~~~~~~~ 235 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+ ..+..++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~l 95 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTT---------GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGL 95 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTT---------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHH
Confidence 467889999999989999999876421 2223334555566666666554 57999976643 2346788
Q ss_pred HHHHHHcCCCEEEEecCC
Q 014581 236 ARVALRSGSEGVSAINTI 253 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~ 253 (422)
++.+.+.|+|++.+....
T Consensus 96 a~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 96 AKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEEcCCC
Confidence 999999999999888644
No 424
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.06 E-value=0.13 Score=49.31 Aligned_cols=85 Identities=19% Similarity=0.190 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 88 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGT---------TGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYA 88 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHH
Confidence 46788899999998899999987632 13333345555666676666544 689999876642 2467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 89 ~~A~~~Gadavlv~~P~ 105 (297)
T 2rfg_A 89 QHAQQAGADAVLCVAGY 105 (297)
T ss_dssp HHHHHHTCSEEEECCCT
T ss_pred HHHHhcCCCEEEEcCCC
Confidence 99999999999887544
No 425
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.05 E-value=0.13 Score=49.63 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-...+ ..+..+++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~Gt---------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 96 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILAN---------FSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARS 96 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSG---------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHH
Confidence 46788899999998999999988732 13333344555566676666554 68999987653 23478889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.++++|+|++.+....
T Consensus 97 ~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 97 LRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHTTCSEEEECCSC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999887654
No 426
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.03 E-value=0.82 Score=42.01 Aligned_cols=47 Identities=23% Similarity=0.319 Sum_probs=36.0
Q ss_pred CceEEEecCCCCHHHHHHHHH-hCCCEEEEhhHHHhhh---hHHHHHHHHHH
Q 014581 307 DYSLSGIGGVETGGDAAEFIL-LGANTVQVCTGVMMHG---YGLVKRLCEEL 354 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~-aGAd~V~vgtall~~G---p~~i~~i~~~l 354 (422)
+.|++..||+. ++.+.+++. .+..+|-+.|++-..| +..++++.+..
T Consensus 173 ~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGVEs~G~KD~~KI~~Fi~~v 223 (228)
T 4aaj_A 173 KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGVEKYGIKDPKLVEEFVRRA 223 (228)
T ss_dssp HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGEETTEECHHHHHHHHHHH
T ss_pred cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCCCCCCCcCHHHHHHHHHHH
Confidence 57899999994 899999987 7999999999997543 33444444443
No 427
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=95.03 E-value=0.18 Score=50.05 Aligned_cols=103 Identities=10% Similarity=-0.071 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCC---------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChh
Q 014581 134 ETMLKEFKQLKALYPDKILIASIME---------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 134 e~~l~~i~~~k~~~~~~pvi~si~~---------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
.-.++.++.+++..+..||.+-+.. +.+.+++.+++++++++|+|+|++....-.. . +... ...
T Consensus 218 r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--~---~~~~-~~~- 290 (376)
T 1icp_A 218 RFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT--A---WEKI-ECT- 290 (376)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------------CC-
T ss_pred HHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC--C---CCcc-ccH-
Confidence 3345556666665542389988742 1234578899999999999999986431110 0 0000 111
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+.++.+|+.+++||++ ...+ + .+.++.+.+.| +|.|.+.
T Consensus 291 ---~~~~~vr~~~~iPvi~--~G~i-~-~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 291 ---ESLVPMRKAYKGTFIV--AGGY-D-REDGNRALIEDRADLVAYG 330 (376)
T ss_dssp ---CCSHHHHHHCCSCEEE--ESSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred ---HHHHHHHHHcCCCEEE--eCCC-C-HHHHHHHHHCCCCcEEeec
Confidence 2345566667899986 3555 4 45566666666 8987644
No 428
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=95.01 E-value=0.42 Score=45.75 Aligned_cols=187 Identities=14% Similarity=0.166 Sum_probs=101.8
Q ss_pred HHHHHHhCCCEEEEc-cCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC---hHHHHHHHHHcCC
Q 014581 169 IDRVEETGIDAIEVN-FSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD---ITEPARVALRSGS 244 (422)
Q Consensus 169 a~~~~~aGaD~iElN-~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~aGa 244 (422)
|+.++++|+|+|=+. .++-......+.+ .-..+.+...++.|.+.+++||++=+...+.+ ..+.++.+.++|+
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~---~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 108 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSN---EASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGV 108 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC------------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCC---CCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 566777899999876 2111110001100 12345566677777778899999988765554 4566788889999
Q ss_pred CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC----HH
Q 014581 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET----GG 320 (422)
Q Consensus 245 dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s----~~ 320 (422)
++|.+=+.... +.. +..+| .++.+.|.. +.+.+|+.+..... ..++-|+|=..-.- .+
T Consensus 109 agv~iED~~~~------k~c---------gH~gg-~~k~l~p~~-e~~~rI~Aa~~a~~-~~~~~i~aRtda~~a~~g~~ 170 (295)
T 1s2w_A 109 AGACLEDKLFP------KTN---------SLHDG-RAQPLADIE-EFALKIKACKDSQT-DPDFCIVARVEAFIAGWGLD 170 (295)
T ss_dssp CEEEEECBCC-----------------------C-TTCCBCCHH-HHHHHHHHHHHHCS-STTCEEEEEECTTTTTCCHH
T ss_pred cEEEECCCCCC------ccc---------cccCC-CCCcccCHH-HHHHHHHHHHHhcc-cCCcEEEEeehHHhccccHH
Confidence 99987764321 110 11122 235566765 23444444432211 12566777544331 23
Q ss_pred ----HHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHH------HHHHcCCCCHHHhhcCCcccCC
Q 014581 321 ----DAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKD------FMKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 321 ----da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~------~m~~~G~~si~d~~G~~~~~~~ 378 (422)
++..+..+|||+|.+=..+ .. +..++++.+++.. .+.+.|..+++|+.......+.
T Consensus 171 ~ai~Ra~ay~eAGAd~i~~e~~~-~~-~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 171 EALKRAEAYRNAGADAILMHSKK-AD-PSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVI 236 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCS-SS-SHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC-CC-HHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEE
Confidence 4556677999999984321 11 4567777777651 0223455667777654444333
No 429
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=94.99 E-value=0.59 Score=46.59 Aligned_cols=141 Identities=16% Similarity=0.087 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHh-CCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCC--ChHHHHH
Q 014581 162 KAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNIT--DITEPAR 237 (422)
Q Consensus 162 ~~~~~~~a~~~~~a-GaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~--~~~~~a~ 237 (422)
++++.+.++.+.+. |+..+-+.++ .+++.-.+.+++||+.. ++++.|-.+..++ +..++++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG---------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~ 233 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT---------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGI 233 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC---------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC---------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHH
Confidence 57777777777777 9999999875 11223345566666664 6789998766554 2456677
Q ss_pred HHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCC
Q 014581 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE 317 (422)
Q Consensus 238 ~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~ 317 (422)
.+.+.|+..|. +|. + .++..+++++.. ++||.+..-+.
T Consensus 234 ~l~~~~i~~iE----------------qP~------------------~-d~~~~~~l~~~~-------~iPIa~dE~~~ 271 (398)
T 4dye_A 234 ALEELDLEYLE----------------DPC------------------V-GIEGMAQVKAKV-------RIPLCTNMCVV 271 (398)
T ss_dssp HHGGGCCSEEE----------------CCS------------------S-HHHHHHHHHHHC-------CSCEEESSSCC
T ss_pred HHhhcCCCEEc----------------CCC------------------C-CHHHHHHHHhhC-------CCCEEeCCcCC
Confidence 77777776662 221 1 234556677765 79999999999
Q ss_pred CHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 318 TGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 318 s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
+..|+.+++..| +|.||+--.-. .|..-..++. .+.+++|+.
T Consensus 272 ~~~~~~~~i~~~a~d~v~~k~~~~-GGit~~~~ia----~~A~~~gi~ 314 (398)
T 4dye_A 272 RFEDFAPAMRLNAVDVIHGDVYKW-GGIAATKALA----AHCETFGLG 314 (398)
T ss_dssp SGGGHHHHHHTTCCSEEEECHHHH-TSHHHHHHHH----HHHHHHTCE
T ss_pred CHHHHHHHHHhCCCCEEEeCcccc-CCHHHHHHHH----HHHHHcCCe
Confidence 999999999876 88999875544 2344333333 334455553
No 430
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.92 E-value=0.51 Score=45.48 Aligned_cols=84 Identities=20% Similarity=0.271 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCC-CCChHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPN-ITDITEPAR 237 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~-~~~~~~~a~ 237 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++=...+ ..+..++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~ 96 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGI---------LGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLAR 96 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTG---------GGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCcc---------CcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHH
Confidence 46788899999998999999987732 13333344555566666665554 78999976543 234778899
Q ss_pred HHHHcCCCEEEEecC
Q 014581 238 VALRSGSEGVSAINT 252 (422)
Q Consensus 238 ~l~~aGadgi~v~n~ 252 (422)
.++++|+|++.+...
T Consensus 97 ~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 97 LSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHTCSEEEECCC
T ss_pred HHHHcCCCEEEECCC
Confidence 999999999988743
No 431
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.90 E-value=0.69 Score=44.34 Aligned_cols=157 Identities=12% Similarity=0.039 Sum_probs=89.1
Q ss_pred HHHHHHHhCCCEEEEc-c-------CCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCCCCC---hHHH
Q 014581 168 LIDRVEETGIDAIEVN-F-------SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITD---ITEP 235 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN-~-------scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~---~~~~ 235 (422)
.|+.++++|+|+|=+- . +-|.+. .-..+.+...++.|.+.. ++||++=+...+.+ +.+.
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~---------~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~t 100 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQADLG---------ICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVART 100 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCSSS---------CCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCC---------cCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHH
Confidence 3566788999999872 1 222210 112344455566676654 89999998766655 3466
Q ss_pred HHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC-CCCCceEEEec
Q 014581 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF-NDKDYSLSGIG 314 (422)
Q Consensus 236 a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~-~~~~ipIIa~G 314 (422)
++.+.++|+++|.+=+.... + ..|-+.|+.+.|.. +.+.+|+.+...+- ...++-|++=-
T Consensus 101 v~~l~~aGaagv~iEDq~~~------K------------rcgh~~gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ART 161 (302)
T 3fa4_A 101 TEQYSRSGVAAFHIEDQVQT------K------------RCGHLAGKILVDTD-TYVTRIRAAVQARQRIGSDIVVIART 161 (302)
T ss_dssp HHHHHHTTCCEEEECSBCCC-------------------------CCCBCCHH-HHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred HHHHHHcCCcEEEECCCCCC------c------------ccCCCCCCeecCHH-HHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 77889999999987654321 0 01223355555543 34555544432110 01256676654
Q ss_pred CCC---CHHHHH----HHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 315 GVE---TGGDAA----EFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 315 GI~---s~~da~----~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
... ..++++ .|..+|||+|.+-.. .+ +..++++.+.+.
T Consensus 162 Da~~~~gldeAi~Ra~ay~eAGAD~ifi~g~--~~-~~ei~~~~~~~~ 206 (302)
T 3fa4_A 162 DSLQTHGYEESVARLRAARDAGADVGFLEGI--TS-REMARQVIQDLA 206 (302)
T ss_dssp CCHHHHCHHHHHHHHHHHHTTTCSEEEETTC--CC-HHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHcCCCEEeecCC--CC-HHHHHHHHHHhc
Confidence 433 234443 355689999998642 33 667777777764
No 432
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.89 E-value=0.07 Score=51.77 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=55.5
Q ss_pred hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEE
Q 014581 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLS 311 (422)
Q Consensus 232 ~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipII 311 (422)
..++++.+.+.|++||++.++++....++. ..-.+.++.+++...+ ++|||
T Consensus 34 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~------------------------~Er~~v~~~~~~~~~g-----rvpvi 84 (318)
T 3qfe_A 34 QERYYAYLARSGLTGLVILGTNAEAFLLTR------------------------EERAQLIATARKAVGP-----DFPIM 84 (318)
T ss_dssp HHHHHHHHHTTTCSEEEESSGGGTGGGSCH------------------------HHHHHHHHHHHHHHCT-----TSCEE
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCH------------------------HHHHHHHHHHHHHhCC-----CCcEE
Confidence 567888899999999999988765322211 1123555666666643 68888
Q ss_pred EecCCCCHHHHHHHH----HhCCCEEEEhhHHHh
Q 014581 312 GIGGVETGGDAAEFI----LLGANTVQVCTGVMM 341 (422)
Q Consensus 312 a~GGI~s~~da~~~l----~aGAd~V~vgtall~ 341 (422)
+.-|=.+-+++++.. .+|||+|++-+..++
T Consensus 85 aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 85 AGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 766656666666654 479999999998655
No 433
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.76 E-value=3.8 Score=41.01 Aligned_cols=105 Identities=12% Similarity=0.104 Sum_probs=60.9
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.+++...|.+ ++-..+.+.++||-++-+-+...... . .....|++..++++-..+-...
T Consensus 64 ~~~~~~~Ga~--d~~sA~~~~~aGf~Aiy~SG~~vAa~--~-----------------~~s~~G~PD~gl~~~~ev~~~v 122 (435)
T 3lg3_A 64 KGYINCLGAL--TGGQALQQAKAGVEAIYMSGWQVAAD--A-----------------NTASSMYPDQSLYPVDSVPAVV 122 (435)
T ss_dssp SSSEEEEBCC--SHHHHHHHHHHTCCSEEECHHHHHHH--C-----------------CTTCSCCCSSSCSCTTHHHHHH
T ss_pred CCcEEeCCCC--cHHHHHHHHHcCCCEEEechHHHhcc--c-----------------chhccCCCCcCcCcHHHHHHHH
Confidence 4555666664 57777778888998777665432110 0 0112355555554432233333
Q ss_pred HHHHHHH---h-------------hCCC--CeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEc
Q 014581 138 KEFKQLK---A-------------LYPD--KILIASIMEEY-NKAAWEELIDRVEETGIDAIEVN 183 (422)
Q Consensus 138 ~~i~~~k---~-------------~~~~--~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN 183 (422)
+.|.++. + .+-+ .||++-+-.|+ +.....+.++.++++|+.+|.|.
T Consensus 123 ~rI~~a~~~~d~~~~~~~~~~~~~~~~d~~lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IE 187 (435)
T 3lg3_A 123 KRINNSFRRADQIQWSNNIEPGSKGYTDYFLPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFE 187 (435)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhhhhhhhhccccccccccccCCCCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 3333221 0 0012 89999996555 34456788999999999999886
No 434
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.76 E-value=0.63 Score=46.14 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCC---------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhH
Q 014581 135 TMLKEFKQLKALYPDKILIASIME---------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRL 205 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~---------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~ 205 (422)
-.++.++.+++..+..||.+-|.. +.+.+++.++++.++++|+|+|++....-. . .. .+.
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~--~-~~-------~~~- 297 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV--N-QQ-------IGD- 297 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT--S-CC-------CCC-
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC--C-CC-------ccH-
Confidence 344556666665543478886642 124577899999999999999998753210 0 00 111
Q ss_pred HHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 206 LEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
+ ++.+|+.+++||++ ...+ + .+.++.+.+.| +|.|.+.
T Consensus 298 --~-~~~ir~~~~iPvi~--~G~i-t-~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 298 --V-VAWVRGSYSGVKIS--NLRY-D-FEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp --H-HHHHHTTCCSCEEE--ESSC-C-HHHHHHHHHTTSCSEEEES
T ss_pred --H-HHHHHHHCCCcEEE--ECCC-C-HHHHHHHHHcCCCeEEEec
Confidence 4 67788888999987 3445 3 55666677776 8988644
No 435
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=94.76 E-value=0.13 Score=51.53 Aligned_cols=152 Identities=13% Similarity=0.092 Sum_probs=92.9
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCcccccccc-ccChhHHHHHHHHHhhcc--CccEEEEECCCCC--ChHHHHHHHH
Q 014581 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV-GQDCRLLEEVCGWINAKA--TVPVWAKMTPNIT--DITEPARVAL 240 (422)
Q Consensus 166 ~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l-~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~--~~~~~a~~l~ 240 (422)
.+.++.+.+.|+..+-+.++-|... ...+..+ ..+.+...+.+++||+.+ +.+|.+..+..++ +..++++.+.
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~--~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~ 234 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAE--KTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALT 234 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHH--HHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTG
T ss_pred HHHHHHHHHhCCCEEEEcCCCcccc--ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHh
Confidence 4556666678999999886421100 0000000 012444566778888876 6899998776554 3456777788
Q ss_pred HcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHH
Q 014581 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG 320 (422)
Q Consensus 241 ~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~ 320 (422)
+.|++.|. +|.+. .. ++..+++++.. ++||++...+.+.+
T Consensus 235 ~~~i~~iE----------------eP~~~-------~~----------~~~~~~l~~~~-------~iPIa~dE~~~~~~ 274 (400)
T 4dxk_A 235 PYQTFWHE----------------DPIKM-------DS----------LSSLTRYAAVS-------PAPISASETLGSRW 274 (400)
T ss_dssp GGCCSEEE----------------CCBCT-------TS----------GGGHHHHHHHC-------SSCEEECTTCCHHH
T ss_pred hcCCCEEE----------------cCCCc-------cc----------HHHHHHHHHhC-------CCCEEecCCcCCHH
Confidence 88877663 12210 11 12234566665 79999999999999
Q ss_pred HHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 321 DAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 321 da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
++.+++..| +|.||+--.-. .|..-..++ ..+.+.+|..
T Consensus 275 ~~~~~l~~~a~d~v~~d~~~~-GGit~~~ki----a~~A~~~gi~ 314 (400)
T 4dxk_A 275 AFRDLLETGAAGVVMLDISWC-GGLSEARKI----ASMAEAWHLP 314 (400)
T ss_dssp HHHHHHHTTCCCEEEECTTTT-THHHHHHHH----HHHHHHTTCC
T ss_pred HHHHHHHcCCCCEEEeCcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 999999987 79999865433 233333333 2344555553
No 436
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=94.73 E-value=0.15 Score=48.60 Aligned_cols=91 Identities=15% Similarity=0.074 Sum_probs=60.1
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+.++..|+.. ..|+.|-+. + .+-++.+.++|+|.|.+.|....
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~----t-~eea~eal~aGaD~I~LDn~~~~------------------------------ 226 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD----S-LEQLDAVLPEKPELILLDNFAVW------------------------------ 226 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES----S-HHHHHHHGGGCCSEEEEETCCHH------------------------------
T ss_pred HHHHHHHHHhCCCCCEEEEeC----C-HHHHHHHHHcCCCEEEECCCCHH------------------------------
Confidence 44555555543 236776443 3 35677778899998877763210
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall 340 (422)
...+.++.+++.. .+++|.++||| +.+.+.++..+|+|.+.+|+...
T Consensus 227 -~~~~~v~~l~~~~------~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 227 -QTQTAVQRRDSRA------PTVMLESSGGL-SLQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp -HHHHHHHHHHHHC------TTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTS
T ss_pred -HHHHHHHHhhccC------CCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHc
Confidence 1113333343322 16899999999 59999999999999999998543
No 437
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.73 E-value=1.2 Score=42.75 Aligned_cols=157 Identities=15% Similarity=0.061 Sum_probs=88.7
Q ss_pred HHHHHHHhCCCEEEEc-c-------CCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCCCC---hHH
Q 014581 168 LIDRVEETGIDAIEVN-F-------SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNITD---ITE 234 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN-~-------scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~---~~~ 234 (422)
.|+.++++|+|+|=+- . +-|.+. .-..+.+...++.|.+.+ ++||++=+...+.+ ..+
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~---------~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~ 107 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLA---------IAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVAR 107 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSS---------CSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCC---------CCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHH
Confidence 3566788899999872 1 222210 123344555666776665 49999998766555 356
Q ss_pred HHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC-CCCCceEEEe
Q 014581 235 PARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF-NDKDYSLSGI 313 (422)
Q Consensus 235 ~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~-~~~~ipIIa~ 313 (422)
.++.+.++|+++|.+=+.... + ..|-+.|+.+.|... .+.+|+.+...+- .+.++-|++=
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~------k------------~cgh~~gk~l~~~~e-~~~rI~Aa~~A~~~~~~d~~I~AR 168 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILT------K------------RCGHLSGKKVVSRDE-YLVRIRAAVATKRRLRSDFVLIAR 168 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCC------C--------------------CBCCHHH-HHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHcCCeEEEEcCCCCC------c------------ccCCCCCCeecCHHH-HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 678889999999987654321 0 012234555666543 3444544321100 0125666665
Q ss_pred cCCC-------CHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 314 GGVE-------TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 314 GGI~-------s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
-... .-+.+..|..+|||++.+-.. .. +..++++.+.+.
T Consensus 169 TDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~--~~-~~~~~~i~~~~~ 214 (307)
T 3lye_A 169 TDALQSLGYEECIERLRAARDEGADVGLLEGF--RS-KEQAAAAVAALA 214 (307)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC--SC-HHHHHHHHHHHT
T ss_pred chhhhccCHHHHHHHHHHHHHCCCCEEEecCC--CC-HHHHHHHHHHcc
Confidence 4432 122344466799999988632 23 667888887774
No 438
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=94.73 E-value=0.32 Score=49.24 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=62.7
Q ss_pred CCe-EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCC-CC--c-ccccccccc-ChhHHHHHHHHHhhcc--Ccc
Q 014581 149 DKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHG-MP--E-RKMGAAVGQ-DCRLLEEVCGWINAKA--TVP 220 (422)
Q Consensus 149 ~~p-vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~-~~--~-~~~G~~l~~-~~~~v~~iv~~vr~~~--~iP 220 (422)
+.| |++-|..+.+.++..++|+.++++|+|+|.+.-..... .. . ...|+.-+. ......++++.+++.+ ++|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 568 89999766677789999999999999999886322111 00 0 011111011 0122346777888877 899
Q ss_pred EEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 221 VWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 221 v~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
|+. ...+.+.. .|..+.++|||+|-+.
T Consensus 376 VIg--~GGI~s~~-DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIA--SGGIFSGL-DALEKIEAGASVCQLY 402 (443)
T ss_dssp EEE--ESSCCSHH-HHHHHHHTTEEEEEES
T ss_pred EEE--ECCCCCHH-HHHHHHHcCCCEEEEc
Confidence 987 35565544 4555567999988654
No 439
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.72 E-value=1.6 Score=42.59 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccC--CCCCCCccccccccccChhHHHHHHHHHhhc-cCccEEEEECCCCCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFS--CPHGMPERKMGAAVGQDCRLLEEVCGWINAK-ATVPVWAKMTPNITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~s--cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~-~~iPv~vKl~~~~~~~~~~a 236 (422)
.+.++-.++++.+.++|+|.||+.+. .|.+.+. +|-.... ..+.++.+++. .+.|+.+=+.|+. ...+.+
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~--~g~~~~~----~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i 99 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFN--YGFGRHT----DLEYIEAVAGEISHAQIATLLLPGI-GSVHDL 99 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTT--TBCCSSC----HHHHHHHHHTTCSSSEEEEEECBTT-BCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCc--ccCCCCC----HHHHHHHHHhhCCCCEEEEEecCCc-ccHHHH
Confidence 46788899999999999999999521 2222111 1211122 33455555544 3566665434432 236788
Q ss_pred HHHHHcCCCEEEEec
Q 014581 237 RVALRSGSEGVSAIN 251 (422)
Q Consensus 237 ~~l~~aGadgi~v~n 251 (422)
+.+.++|+|.+.+..
T Consensus 100 ~~a~~aGvd~v~I~~ 114 (345)
T 1nvm_A 100 KNAYQAGARVVRVAT 114 (345)
T ss_dssp HHHHHHTCCEEEEEE
T ss_pred HHHHhCCcCEEEEEE
Confidence 889999999998764
No 440
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.68 E-value=1.1 Score=41.79 Aligned_cols=89 Identities=12% Similarity=0.149 Sum_probs=61.5
Q ss_pred CCe-EEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEEC
Q 014581 149 DKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMT 226 (422)
Q Consensus 149 ~~p-vi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~ 226 (422)
++| |.++|. +.+.++..+-++.+...|+|.||+=+-+-.. ..+.+.+.+.+..+|+.. ++|+++-++
T Consensus 18 g~PkIcvpl~-~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~----------~~~~~~v~~~l~~lr~~~~~lPiI~T~R 86 (258)
T 4h3d_A 18 GRPKICVPII-GKNKKDIIKEAKELKDACLDIIEWRVDFFEN----------VENIKEVKEVLYELRSYIHDIPLLFTFR 86 (258)
T ss_dssp SSCEEEEEEC-CSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT----------TTCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCEEEEEeC-CCCHHHHHHHHHHHhhcCCCEEEEeeccccc----------cCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 455 778997 6788888888888888899999997642211 134567888888888876 799999887
Q ss_pred CCCC------C---hHHHHHHHHHcC-CCEEE
Q 014581 227 PNIT------D---ITEPARVALRSG-SEGVS 248 (422)
Q Consensus 227 ~~~~------~---~~~~a~~l~~aG-adgi~ 248 (422)
+..+ + -.++.+.+.+.| +|.|.
T Consensus 87 t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iD 118 (258)
T 4h3d_A 87 SVVEGGEKLISRDYYTTLNKEISNTGLVDLID 118 (258)
T ss_dssp CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEE
T ss_pred chhhCCCCCCCHHHHHHHHHHHHhcCCchhhH
Confidence 5321 1 234445555665 67663
No 441
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.68 E-value=0.21 Score=48.41 Aligned_cols=126 Identities=13% Similarity=0.066 Sum_probs=81.7
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
+.||+..=+.+.+.. +++..+.++|..++-.. .. ..+++.+.+.++.+++.++.|+.|-+-.+
T Consensus 15 ~~Pii~apM~gvs~~---~la~av~~aGglG~i~~---~~-----------~~s~~~l~~~i~~i~~~~~~p~~v~l~v~ 77 (328)
T 2gjl_A 15 EHPIMQGGMQWVGRA---EMAAAVANAGGLATLSA---LT-----------QPSPEALAAEIARCRELTDRPFGVNLTLL 77 (328)
T ss_dssp SSSEEECCCTTTCSH---HHHHHHHHTTSBCEEET---TT-----------SSSHHHHHHHHHHHHHHCSSCCEEEEEEC
T ss_pred CCCEEECCCCCCCcH---HHHHHHHHCCCeEEeCC---CC-----------CCCHHHHHHHHHHHHHhcCCCeEEEEecc
Confidence 568776555444332 35566667775444311 11 12356777888888887777776654433
Q ss_pred ----CCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCC
Q 014581 229 ----ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304 (422)
Q Consensus 229 ----~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~ 304 (422)
..+..+.++.+.+.|+|+|.++... | .+.++.+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~d~V~~~~g~--------------------------------p--~~~~~~l~~~------ 117 (328)
T 2gjl_A 78 PTQKPVPYAEYRAAIIEAGIRVVETAGND--------------------------------P--GEHIAEFRRH------ 117 (328)
T ss_dssp CCSSCCCHHHHHHHHHHTTCCEEEEEESC--------------------------------C--HHHHHHHHHT------
T ss_pred ccccCccHHHHHHHHHhcCCCEEEEcCCC--------------------------------c--HHHHHHHHHc------
Confidence 2345688899999999998765310 1 1334445442
Q ss_pred CCCceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 305 ~~~ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
+++|+. .+.+.+++.++..+|||+|.+
T Consensus 118 --gi~vi~--~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 118 --GVKVIH--KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp --TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred --CCCEEe--eCCCHHHHHHHHHcCCCEEEE
Confidence 578874 488999999999999999988
No 442
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=94.61 E-value=3.2 Score=39.42 Aligned_cols=162 Identities=15% Similarity=0.196 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHh--hCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHH
Q 014581 134 ETMLKEFKQLKA--LYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211 (422)
Q Consensus 134 e~~l~~i~~~k~--~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~ 211 (422)
+.+...++.+.+ .+ +.||.+.+--+.+.+. ++++.++|+.-+-++.|.- .++.+.+..+++++
T Consensus 64 ~~~~~~v~~~A~~~~~-~VPValHlDHg~~~e~----i~~ai~~GFtSVMiDgS~~----------p~eeNi~~Tk~vv~ 128 (288)
T 3q94_A 64 KTVVAMVKALIEEMNI-TVPVAIHLDHGSSFEK----CKEAIDAGFTSVMIDASHH----------PFEENVETTKKVVE 128 (288)
T ss_dssp HHHHHHHHHHHHHTTC-CSCEEEEEEEECSHHH----HHHHHHHTCSEEEECCTTS----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC-CCcEEEECCCCCCHHH----HHHHHHcCCCeEEEeCCCC----------CHHHHHHHHHHHHH
Confidence 333344444444 33 7899999964444443 3445567999998887631 13445566777777
Q ss_pred HHhhccCccEEEEEC---C----------CCCChHHHHHHHHHcCCCEEEEec-CCcccccccccCCCCCCCCCCCCccC
Q 014581 212 WINAKATVPVWAKMT---P----------NITDITEPARVALRSGSEGVSAIN-TIMSVMGIDLKTLRPEPCVEGYSTPG 277 (422)
Q Consensus 212 ~vr~~~~iPv~vKl~---~----------~~~~~~~~a~~l~~aGadgi~v~n-~~~~~~~id~e~~~p~~~~~~~~~~g 277 (422)
..+.. ++.|=.-|. . .++++.+..+...+.|+|.+-+.- +. .|
T Consensus 129 ~ah~~-gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~----------------------HG 185 (288)
T 3q94_A 129 YAHAR-NVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSV----------------------HG 185 (288)
T ss_dssp HHHTT-TCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCB----------------------SS
T ss_pred HHHHc-CCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcc----------------------cC
Confidence 65543 444433332 1 146777777778899999986643 22 12
Q ss_pred CCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC-HHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET-GGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 278 G~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s-~~da~~~l~aGAd~V~vgtall~~ 342 (422)
-|.|.+ .+.++.++++++.+ ++|++.=||=.. -+++.+++..|..=|=++|-+..-
T Consensus 186 ~Y~~~p--~Ld~~~L~~I~~~v-------~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a 242 (288)
T 3q94_A 186 PYKGEP--NLGFAEMEQVRDFT-------GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIE 242 (288)
T ss_dssp CCSSSC--CCCHHHHHHHHHHH-------CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred CcCCCC--ccCHHHHHHHHHhc-------CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHH
Confidence 333321 34456778888887 688887776444 566999999999999999987643
No 443
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=94.61 E-value=4.2 Score=40.79 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=59.9
Q ss_pred CCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHH
Q 014581 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137 (422)
Q Consensus 58 nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l 137 (422)
.+++...|.+ ++-..+.+.++||-++-+-+...... .+ ....|++..++++ .++++
T Consensus 64 ~~~l~~~Ga~--D~~sA~~~~~aGf~Aiy~SG~~vAa~--~~-----------------~s~~G~PD~~~~~---~~ev~ 119 (439)
T 3i4e_A 64 EPFVNALGAL--TGNQAMQQVKAGLKAIYLSGWQVAGD--AN-----------------VAGEMYPDQSLYP---ANSVP 119 (439)
T ss_dssp SSCEEEEBCC--SHHHHHHHHHHTCSCEEECHHHHHHH--TC-----------------TTCCCCCSSSCSC---TTHHH
T ss_pred CCCEEeCCCC--CHHHHHHHHHhCCCEEEechHHHhcc--cc-----------------cccCCCCCcccCC---HHHHH
Confidence 3445555554 57777778888987776655432110 00 1123555555444 33333
Q ss_pred HHHHHHHhh-------------------CCC--CeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEc
Q 014581 138 KEFKQLKAL-------------------YPD--KILIASIMEEY-NKAAWEELIDRVEETGIDAIEVN 183 (422)
Q Consensus 138 ~~i~~~k~~-------------------~~~--~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN 183 (422)
+.++++.+. ..+ .||++-+-.|+ +.....+.++.++++|+.+|.|.
T Consensus 120 ~~v~rI~~a~~~ad~i~~~~~~~~~~~~~~d~~~PviaD~dtGfG~~~~v~~~vk~~~~aGaaGi~iE 187 (439)
T 3i4e_A 120 LVVKRINNTLTRADQIQWSEGKNPGDEGYVDFFAPIVADAEAGFGGVLNAFELMKAMIEAGASGVHFE 187 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHhHhhhhhhccccccccccCCCCCeEEECCCCCCccHHHHHHHHHHHHcCCEEEEEe
Confidence 333332211 113 89999996555 34467788999999999999885
No 444
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.59 E-value=0.78 Score=46.51 Aligned_cols=152 Identities=13% Similarity=0.116 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC
Q 014581 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG 243 (422)
Q Consensus 164 ~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG 243 (422)
+..++|+..++. |.+|-+..- .. .+....+. ++.+|+.+++||+.|= ++.+..++.+ +..+|
T Consensus 69 ~~~~iA~~y~~~-A~~IsvLTd-------~~---~F~gs~~d----L~~vr~~v~lPvLrKD--FI~d~~Qi~e-a~~~G 130 (452)
T 1pii_A 69 DPARIAAIYKHY-ASAISVLTD-------EK---YFQGSFNF----LPIVSQIAPQPILCKD--FIIDPYQIYL-ARYYQ 130 (452)
T ss_dssp CHHHHHHHHTTT-CSEEEEECC-------ST---TTCCCTTH----HHHHHHHCCSCEEEES--CCCSHHHHHH-HHHTT
T ss_pred CHHHHHHHHHhh-CcEEEEEec-------cc---ccCCCHHH----HHHHHHhcCCCeEEEe--ccCCHHHHHH-HHHcC
Confidence 345677878776 999887531 11 11223333 4455666799999884 4556666555 88999
Q ss_pred CCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHH
Q 014581 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323 (422)
Q Consensus 244 adgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~ 323 (422)
||+|.++-+... +..+..+.+..+.+ ++.+++ -|+|.+++.
T Consensus 131 AD~ILLi~a~l~------------------------------~~~l~~l~~~a~~l-------gm~~Lv--Evh~~eE~~ 171 (452)
T 1pii_A 131 ADACLLMLSVLD------------------------------DDQYRQLAAVAHSL-------EMGVLT--EVSNEEEQE 171 (452)
T ss_dssp CSEEEEETTTCC------------------------------HHHHHHHHHHHHHT-------TCEEEE--EECSHHHHH
T ss_pred CCEEEEEcccCC------------------------------HHHHHHHHHHHHHc-------CCeEEE--EeCCHHHHH
Confidence 999988865321 11233233333333 565555 589999999
Q ss_pred HHHHhCCCEEEEhhHHHhh---hhHHHHHHHHHHHH---HHHHcCCCCHHHhhcC
Q 014581 324 EFILLGANTVQVCTGVMMH---GYGLVKRLCEELKD---FMKMHNFSSIEDFRGA 372 (422)
Q Consensus 324 ~~l~aGAd~V~vgtall~~---Gp~~i~~i~~~l~~---~m~~~G~~si~d~~G~ 372 (422)
.++.+||+.|.+--.=+.. ......++...+.. ...+-|+.+.+|++-.
T Consensus 172 ~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~ 226 (452)
T 1pii_A 172 RAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVREL 226 (452)
T ss_dssp HHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHH
T ss_pred HHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHH
Confidence 9999999999986432221 13445666655532 4567888888887643
No 445
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=94.58 E-value=0.16 Score=48.60 Aligned_cols=87 Identities=18% Similarity=0.157 Sum_probs=57.6
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+-++++|+.. .+|+.|- +++.. -++.+.++|+|.|-+-|..
T Consensus 197 ~~Av~~~r~~~p~~~ieVE----vdtld-e~~eAl~aGaD~I~LDn~~-------------------------------- 239 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIE----VETLD-QLRTALAHGARSVLLDNFT-------------------------------- 239 (298)
T ss_dssp HHHHHHHHHHC--CCCEEE----ESSHH-HHHHHHHTTCEEEEEESCC--------------------------------
T ss_pred HHHHHHHHHhCCCCCEEEE----eCCHH-HHHHHHHcCCCEEEECCCC--------------------------------
Confidence 34455555543 3455544 33444 4667778999988766521
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
| +.+++..+.+.+ ++.|.++||| +.+.+.++..+|+|.+.+|+..
T Consensus 240 ~---~~l~~av~~i~~-----~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 240 L---DMMRDAVRVTEG-----RAVLEVSGGV-NFDTVRAIAETGVDRISIGALT 284 (298)
T ss_dssp H---HHHHHHHHHHTT-----SEEEEEESSC-STTTHHHHHHTTCSEEECGGGG
T ss_pred H---HHHHHHHHHhCC-----CCeEEEEcCC-CHHHHHHHHHcCCCEEEECCee
Confidence 1 233344444432 7999999999 5899999999999999999854
No 446
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=94.47 E-value=0.19 Score=48.02 Aligned_cols=87 Identities=9% Similarity=0.057 Sum_probs=59.4
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcc
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~ 285 (422)
.+.++.+|+.. .+|+.|= +++. +-++.+.++|+|.|-+-|..
T Consensus 195 ~~Av~~ar~~~p~~kIeVE----v~tl-~e~~eAl~aGaDiImLDn~s-------------------------------- 237 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIE----CDNI-SQVEESLSNNVDMILLDNMS-------------------------------- 237 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEE----ESSH-HHHHHHHHTTCSEEEEESCC--------------------------------
T ss_pred HHHHHHHHHhCCCCCEEEE----ECCH-HHHHHHHHcCCCEEEECCCC--------------------------------
Confidence 34455555543 4566663 3343 45667788999988765521
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHH
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtal 339 (422)
| +.++++.+.+.+ ++.|.++||| +.+.+.++..+|+|.+.+|+..
T Consensus 238 ~---~~l~~av~~~~~-----~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 238 I---SEIKKAVDIVNG-----KSVLEVSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp H---HHHHHHHHHHTT-----SSEEEEESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred H---HHHHHHHHhhcC-----ceEEEEECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 1 234445555543 7899999999 5999999999999999999654
No 447
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.44 E-value=0.27 Score=48.31 Aligned_cols=114 Identities=10% Similarity=0.103 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhC-CCEEEE-c---------cCCCC--CCCcccccccc
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEV-N---------FSCPH--GMPERKMGAAV 199 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aG-aD~iEl-N---------~scP~--~~~~~~~G~~l 199 (422)
++...+.++.+++.. +.||++=+..+.+.+++.++++.++++| +|+|.+ | +.... ..+...+|+.=
T Consensus 178 ~e~~~~il~av~~~~-~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS 256 (354)
T 4ef8_A 178 FDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG 256 (354)
T ss_dssp HHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE
T ss_pred HHHHHHHHHHHHHhh-CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC
Confidence 445555566666654 7899999976667888888898888998 999875 2 11111 00011112111
Q ss_pred cc-ChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 200 GQ-DCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 200 ~~-~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+. -...-.+++..+++.. ++||+. ..++.+..... ++..+|||+|.+.
T Consensus 257 G~~i~p~a~~~i~~v~~~~~~ipII~--~GGI~s~~da~-~~l~aGAd~V~vg 306 (354)
T 4ef8_A 257 GRYVLPTALANINAFYRRCPGKLIFG--CGGVYTGEDAF-LHVLAGASMVQVG 306 (354)
T ss_dssp GGGGHHHHHHHHHHHHHHCTTSEEEE--ESCCCSHHHHH-HHHHHTEEEEEEC
T ss_pred CCCCchHHHHHHHHHHHhCCCCCEEE--ECCcCCHHHHH-HHHHcCCCEEEEh
Confidence 11 1134456777777765 789886 45666655544 4456999988654
No 448
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=94.43 E-value=1.1 Score=43.76 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=41.0
Q ss_pred HHHHHHHhhccCCCCCceEEEecCCC-CHHHHHHHHHhCCC------EEEEhhHHHhhh-h-HHHHHHHHHHHHHHH
Q 014581 292 VMSIAKMMKSEFNDKDYSLSGIGGVE-TGGDAAEFILLGAN------TVQVCTGVMMHG-Y-GLVKRLCEELKDFMK 359 (422)
Q Consensus 292 v~~i~~~~~~~~~~~~ipIIa~GGI~-s~~da~~~l~aGAd------~V~vgtall~~G-p-~~i~~i~~~l~~~m~ 359 (422)
+..+++.++ +.+ +.+-||. .+.|..+++.+|+| .+-+||+++..+ | ..++++.+++...+.
T Consensus 280 l~~IR~~~~------~~~-iLtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~~a~~ 349 (353)
T 2ffc_A 280 IKKIRELFP------DCY-ILAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEVLA 349 (353)
T ss_dssp HHHHHHHCT------TCC-EEECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC------CCe-EEeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 445666653 454 4467774 23456677788998 899999999753 2 457778777766554
No 449
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.40 E-value=0.17 Score=48.43 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCCC-CChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPNI-TDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~-~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ + |....-+.+.-.++++.+.+.+ ++||++-...+- .+..+++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gt---t------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 91 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGT---T------GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQS 91 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST---T------TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---c------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHH
Confidence 46778889999998899999988742 1 3333345566667777777665 689999887642 3467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 92 ~~A~~~Gadavlv~~P~ 108 (294)
T 3b4u_A 92 AEALNAGARNILLAPPS 108 (294)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHhcCCCEEEEcCCc
Confidence 99999999999887544
No 450
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.32 E-value=0.13 Score=49.29 Aligned_cols=85 Identities=21% Similarity=0.207 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++.+.+.+ ++||++-+..+ ..+..+++
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la 92 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLGS---------TGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQA 92 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTSG---------GGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHH
Confidence 46788899999998899999966522 13333344555566666666554 68999977643 33578899
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 93 ~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 93 KLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHTCSEEEEEECC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999887644
No 451
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.30 E-value=0.33 Score=46.23 Aligned_cols=84 Identities=19% Similarity=0.097 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC-CChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI-TDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~-~~~~~~a~~ 238 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+.. |++-...+- .+..++++.
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~ 86 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGTT---------GLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKF 86 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETSTT---------TTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHH
Confidence 467788899999988999999887431 333344566777888888877655 777665532 246788999
Q ss_pred HHHcCCCEEEEecCC
Q 014581 239 ALRSGSEGVSAINTI 253 (422)
Q Consensus 239 l~~aGadgi~v~n~~ 253 (422)
+.++|+|++.+....
T Consensus 87 A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 87 SNEMDILGVSSHSPY 101 (288)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HHhcCCCEEEEcCCc
Confidence 999999999887543
No 452
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=94.28 E-value=2.9 Score=39.16 Aligned_cols=135 Identities=15% Similarity=0.089 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCC
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGa 244 (422)
-.++|..++++|||+|.+++ ..+ .|- -++ +. +..+++.++.|+=+-+.++ .++...+.+.--
T Consensus 55 pv~aA~~ae~aGAdGITvHl---ReD-rRH-----I~d-~D----v~~L~~~i~t~lNlEma~t----~emi~ial~~kP 116 (278)
T 3gk0_A 55 PVRAALAAEDAGADAITLHL---RED-RRH-----IVD-AD----VRTLRPRVKTRMNLECAVT----PEMLDIACEIRP 116 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEEC---CTT-CSS-----SCH-HH----HHHHHHHCSSCEEEEECSS----HHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCEEEecc---CCC-ccc-----CCH-HH----HHHHHHHcCCCEEeecCCC----HHHHHHHHHcCC
Confidence 35677888899999999995 221 111 011 22 3344445578888887764 578888888889
Q ss_pred CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHH
Q 014581 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324 (422)
Q Consensus 245 dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~ 324 (422)
+.+++.---. +. ..+.||+.=.. -...+..+.+.+.+. +..+.++.. -+.+++..
T Consensus 117 ~~vtLVPEkr----------eE------~TTegGlDv~~----~~~~L~~~i~~L~~~--GIrVSLFID---pd~~qI~a 171 (278)
T 3gk0_A 117 HDACLVPEKR----------SE------LTTEGGLDVVG----HFDAVRAACKQLADA--GVRVSLFID---PDEAQIRA 171 (278)
T ss_dssp SEEEECCCSG----------GG------BCSSSSBCTTT----THHHHHHHHHHHHHT--TCEEEEEEC---SCHHHHHH
T ss_pred CEEEECCCCC----------CC------cCCCcchhhhc----cHHHHHHHHHHHHHC--CCEEEEEeC---CCHHHHHH
Confidence 9998773211 11 12345552110 123333343333321 124456665 57889999
Q ss_pred HHHhCCCEEEEhhHHHhh
Q 014581 325 FILLGANTVQVCTGVMMH 342 (422)
Q Consensus 325 ~l~aGAd~V~vgtall~~ 342 (422)
+...||+.|.+.|+-+.+
T Consensus 172 A~~~GAd~IELhTG~YA~ 189 (278)
T 3gk0_A 172 AHETGAPVIELHTGRYAD 189 (278)
T ss_dssp HHHHTCSEEEECCHHHHT
T ss_pred HHHhCcCEEEEecchhhc
Confidence 999999999999998875
No 453
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=94.24 E-value=2.9 Score=38.44 Aligned_cols=136 Identities=16% Similarity=0.111 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCC
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGa 244 (422)
-.++|..++++|||+|.+++- .+ .|- -++ +. +..+++.++.|+=+-+.++ .++...+.+.--
T Consensus 27 pv~aA~~ae~aGAdgITvHlR---eD-rRH-----I~d-~D----v~~L~~~~~~~lNlE~a~t----~emi~ia~~~kP 88 (243)
T 1m5w_A 27 PVQAAFIAEQAGADGITVHLR---ED-RRH-----ITD-RD----VRILRQTLDTRMNLEMAVT----EEMLAIAVETKP 88 (243)
T ss_dssp HHHHHHHHHTTTCSEEEEECC---TT-CSS-----SCH-HH----HHHHHHHCSSEEEEEECSS----HHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCEEEeCCC---CC-ccc-----CCH-HH----HHHHHHhcCCCEEeccCCC----HHHHHHHHHcCC
Confidence 456778888999999999952 21 111 011 22 2334444577888877764 578888888888
Q ss_pred CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHH
Q 014581 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324 (422)
Q Consensus 245 dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~ 324 (422)
+.+++.-- +.+. ..+.||+.= .--...+..+.+.+.+. +..+.++.. -+.+++..
T Consensus 89 ~~vtLVPE----------~r~e------~TTegGldv----~~~~~~l~~~i~~L~~~--GIrVSLFID---pd~~qi~a 143 (243)
T 1m5w_A 89 HFCCLVPE----------KRQE------VTTEGGLDV----AGQRDKMRDACKRLADA--GIQVSLFID---ADEEQIKA 143 (243)
T ss_dssp SEEEECCC----------CSSC------SSCCSCCCS----GGGHHHHHHHHHHHHHT--TCEEEEEEC---SCHHHHHH
T ss_pred CEEEECCC----------CCCC------cCCCcchhH----HhhHHHHHHHHHHHHHC--CCEEEEEeC---CCHHHHHH
Confidence 99987632 1111 123456531 11123444444444321 124455554 47899999
Q ss_pred HHHhCCCEEEEhhHHHhhh
Q 014581 325 FILLGANTVQVCTGVMMHG 343 (422)
Q Consensus 325 ~l~aGAd~V~vgtall~~G 343 (422)
+...||+.|.+.|+-+.+-
T Consensus 144 A~~~GA~~IELhTG~Ya~a 162 (243)
T 1m5w_A 144 AAEVGAPFIEIHTGCYADA 162 (243)
T ss_dssp HHHTTCSEEEEECHHHHHC
T ss_pred HHHhCcCEEEEechhhhcC
Confidence 9999999999999998764
No 454
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.15 E-value=0.17 Score=48.27 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEcc-CC-CCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNF-SC-PHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~-sc-P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~ 238 (422)
+.+...+.++++.+.|||.|+||. |. |.... .+.....+.+..+++.+++.+++||.|=. .-.+.+++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~-----v~~~eE~~rv~pvi~~l~~~~~~piSIDT-----~~~~va~a 105 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAE-----VSVEEELQRVIPVVEAIAQRFEVWISVDT-----SKPEVIRE 105 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCC-----CCHHHHHHHHHHHHHHHHHHCCCEEEEEC-----CCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCc-----CCHHHHHHHHHHHHHHHHhhcCCeEEEeC-----CCHHHHHH
Confidence 456777778888888999999998 43 33210 01123445566777778777788998742 22578888
Q ss_pred HHHcCCCEE
Q 014581 239 ALRSGSEGV 247 (422)
Q Consensus 239 l~~aGadgi 247 (422)
+.++|++-|
T Consensus 106 Al~aGa~iI 114 (282)
T 1aj0_A 106 SAKVGAHII 114 (282)
T ss_dssp HHHTTCCEE
T ss_pred HHHcCCCEE
Confidence 888888855
No 455
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.11 E-value=1.8 Score=40.89 Aligned_cols=177 Identities=12% Similarity=0.088 Sum_probs=97.7
Q ss_pred HHHHHHHhCCCEEEEc-c--CCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCC-C---hHHHHHHHH
Q 014581 168 LIDRVEETGIDAIEVN-F--SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT-D---ITEPARVAL 240 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN-~--scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~-~---~~~~a~~l~ 240 (422)
.|+.++++|+|+|=+. . +.-++.+.. ..-..+.+...++.|.+.+++||++=+...+. + ..+.++.+.
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~~G~pD~-----~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~ 102 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHARGRTDG-----QTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFA 102 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHSCCCSS-----SSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCC-----CCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHH
Confidence 3566778899999876 1 110111110 01244556666777777778999999876665 3 356788899
Q ss_pred HcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhH--HHHHHHHHHHhhccCCCCCceEEEecCCC-
Q 014581 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA--LGKVMSIAKMMKSEFNDKDYSLSGIGGVE- 317 (422)
Q Consensus 241 ~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~a--l~~v~~i~~~~~~~~~~~~ipIIa~GGI~- 317 (422)
++|+++|.+=+... ..|+.+.|.. .+.|+.++++.... +.++-|++=..-.
T Consensus 103 ~aGaagv~iED~~~------------------------~~~k~l~~~~e~~~~I~aa~~a~~~~--g~~~~i~aRtda~~ 156 (275)
T 2ze3_A 103 ALGVAGVNLEDATG------------------------LTPTELYDLDSQLRRIEAARAAIDAS--GVPVFLNARTDTFL 156 (275)
T ss_dssp HTTCSEEEEECBCS------------------------SSSSCBCCHHHHHHHHHHHHHHHHHH--TSCCEEEEECCTTT
T ss_pred HcCCcEEEECCCcC------------------------CCCCccCCHHHHHHHHHHHHHhHhhc--CCCeEEEEechhhh
Confidence 99999997765421 0122233332 23344444332110 0134444433221
Q ss_pred ---------CHH----HHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHH---HHHcCCCCHHHhhcCCcccCC
Q 014581 318 ---------TGG----DAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF---MKMHNFSSIEDFRGASIEYFT 378 (422)
Q Consensus 318 ---------s~~----da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~---m~~~G~~si~d~~G~~~~~~~ 378 (422)
..+ ++..+..+|||+|.+=.. .. +..++++.+.+.-- +..-+.-+.+|+.......+.
T Consensus 157 ~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~--~~-~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~ 230 (275)
T 2ze3_A 157 KGHGATDEERLAETVRRGQAYADAGADGIFVPLA--LQ-SQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVS 230 (275)
T ss_dssp TTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC--CC-HHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEE
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCCEEEECCC--CC-HHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEE
Confidence 123 344556789999988652 22 46777887776411 112245566777655554444
No 456
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=94.09 E-value=0.53 Score=42.51 Aligned_cols=109 Identities=13% Similarity=0.100 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHh---hccCccEEEEECCCCCChHHHHHHHHH
Q 014581 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN---AKATVPVWAKMTPNITDITEPARVALR 241 (422)
Q Consensus 165 ~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr---~~~~iPv~vKl~~~~~~~~~~a~~l~~ 241 (422)
+.+.++.+.+.|+|+|++....... +.++ + +.++++.++ +..++||++- + .++.+.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~---~~~~------~--~~~~~~~l~~~~~~~~v~v~v~------~---~~~~a~~ 92 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDA---LTGE------A--RIKFAEKAQAACREAGVPFIVN------D---DVELALN 92 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTC---CCHH------H--HHHHHHHHHHHHHHHTCCEEEE------S---CHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCH---hHHH------H--HHHHHHHHHHHHHHcCCeEEEc------C---HHHHHHH
Confidence 6677888888899999987422110 1100 0 123333332 2336888873 1 2346678
Q ss_pred cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHH
Q 014581 242 SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321 (422)
Q Consensus 242 aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~d 321 (422)
+|+|+|.+ +.. + . + +.++++.+ +..+++. .+.+.++
T Consensus 93 ~gad~v~l-~~~------~------------------~------~-----~~~~~~~~-------g~~~~~~-s~~t~~e 128 (227)
T 2tps_A 93 LKADGIHI-GQE------D------------------A------N-----AKEVRAAI-------GDMILGV-SAHTMSE 128 (227)
T ss_dssp HTCSEEEE-CTT------S------------------S------C-----HHHHHHHH-------TTSEEEE-EECSHHH
T ss_pred cCCCEEEE-CCC------c------------------c------C-----HHHHHHhc-------CCcEEEE-ecCCHHH
Confidence 99999976 211 0 0 1 12344433 2223332 2578999
Q ss_pred HHHHHHhCCCEEEEhh
Q 014581 322 AAEFILLGANTVQVCT 337 (422)
Q Consensus 322 a~~~l~aGAd~V~vgt 337 (422)
+.++...|||.|.+++
T Consensus 129 ~~~a~~~g~d~v~~~~ 144 (227)
T 2tps_A 129 VKQAEEDGADYVGLGP 144 (227)
T ss_dssp HHHHHHHTCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 9998999999999754
No 457
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=94.02 E-value=0.67 Score=43.44 Aligned_cols=109 Identities=10% Similarity=0.077 Sum_probs=70.8
Q ss_pred cccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccC
Q 014581 124 NIELISDRPLETMLKEFKQLKALYPDKILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202 (422)
Q Consensus 124 n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~ 202 (422)
|.+.+-....+...++|+.+++...+.|+=+-+-. ..+.++...+++.+.++|+|+|-...+-.. .| ..
T Consensus 133 Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~------~G----AT 202 (260)
T 3r12_A 133 NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGT------GG----AT 202 (260)
T ss_dssp CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS------CC----CC
T ss_pred ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCC------CC----CC
Confidence 44433233467788889888887655665444421 246778888888888999999987643111 01 23
Q ss_pred hhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEE
Q 014581 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGV 247 (422)
Q Consensus 203 ~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi 247 (422)
++.++-+ ++.+..++-||.+..+.+. +-+..+.++|++.|
T Consensus 203 ~edV~lm----~~~vg~~v~VKaAGGIrt~-~~al~mi~aGA~Ri 242 (260)
T 3r12_A 203 AEDVHLM----KWIVGDEMGVKASGGIRTF-EDAVKMIMYGADRI 242 (260)
T ss_dssp HHHHHHH----HHHHCTTSEEEEESSCCSH-HHHHHHHHTTCSEE
T ss_pred HHHHHHH----HHHhCCCceEEEeCCCCCH-HHHHHHHHcCCcee
Confidence 3333333 3334678889999988764 56778899999976
No 458
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=94.01 E-value=1.2 Score=45.08 Aligned_cols=158 Identities=9% Similarity=0.012 Sum_probs=103.4
Q ss_pred CeEEEEeC--CCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEE
Q 014581 150 KILIASIM--EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKM 225 (422)
Q Consensus 150 ~pvi~si~--~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl 225 (422)
.|...+.. .+.+++++.+.++.+.+.|+..+-+.+++ +++.-.+.++++|+.+ +++|.|..
T Consensus 188 ~p~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKvG~---------------~~~~d~~~v~avR~a~G~~~~l~vDa 252 (441)
T 4a35_A 188 YPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGA---------------DLQDDMRRCQIIRDMIGPEKTLMMDA 252 (441)
T ss_dssp EEEEECTTCCTTCCHHHHHHHHHHHHHTTCCEEEEECSS---------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred cceEEeccccCCCCHHHHHHHHHHHHHCCCCEEEEcCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 46776542 14588999988888888899999998753 2233344566777764 67899987
Q ss_pred CCCCC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccC
Q 014581 226 TPNIT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303 (422)
Q Consensus 226 ~~~~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~ 303 (422)
+..++ +..++++.+.+.++..|- +|.+ |..++..+++++.+..
T Consensus 253 N~~~~~~~A~~~~~~L~~~~~~~iE----------------eP~~-----------------~~d~~~~~~l~~~l~~-- 297 (441)
T 4a35_A 253 NQRWDVPEAVEWMSKLAKFKPLWIE----------------EPTS-----------------PDDILGHATISKALVP-- 297 (441)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSEEE----------------CCSC-----------------TTCHHHHHHHHHHHGG--
T ss_pred CCCCCHHHHHHHHHhhcccCccEEe----------------CCCC-----------------cccHHHHHHHHHhccC--
Confidence 77664 245677777777766551 2321 1123444567765311
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581 304 NDKDYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364 (422)
Q Consensus 304 ~~~~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~ 364 (422)
.++||.+.--+.+..|+.+++..| +|.||+--.-. .|..-..++ ..+.+.+|+.
T Consensus 298 --~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~-GGit~~~ki----a~lA~~~gv~ 352 (441)
T 4a35_A 298 --LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRL-GSVNENLSV----LLMAKKFEIP 352 (441)
T ss_dssp --GTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTS-SHHHHHHHH----HHHHHHTTCC
T ss_pred --CCCCEEeCCccccHHHHHHHHHcCCCCEEEECcccc-CCHHHHHHH----HHHHHHcCCE
Confidence 179999999999999999999875 78888754432 234333333 3455666665
No 459
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=94.00 E-value=0.4 Score=44.39 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=67.4
Q ss_pred ChHHHHHHHHHHHHhhCCCCeEEEEeC-CCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHH
Q 014581 131 RPLETMLKEFKQLKALYPDKILIASIM-EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEV 209 (422)
Q Consensus 131 ~~~e~~l~~i~~~k~~~~~~pvi~si~-~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~i 209 (422)
...+.++++|+.+++..++.++=+-+- +-.+.++...+++.+.++|+|+|-...+-.. .| ..++.++.+
T Consensus 124 g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~------gg----At~~dv~lm 193 (239)
T 3ngj_A 124 KKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGT------HG----ATPEDVKLM 193 (239)
T ss_dssp TCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSS------CC----CCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCC------CC----CCHHHHHHH
Confidence 446778889988887764544333221 1246778888888888999999987743211 11 233333333
Q ss_pred HHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEE
Q 014581 210 CGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249 (422)
Q Consensus 210 v~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v 249 (422)
|+.+..++-||.+..+.+. +-+..+.++|++.|-.
T Consensus 194 ----r~~vg~~v~VKasGGIrt~-~da~~~i~aGA~riGt 228 (239)
T 3ngj_A 194 ----KDTVGDKALVKAAGGIRTF-DDAMKMINNGASRIGA 228 (239)
T ss_dssp ----HHHHGGGSEEEEESSCCSH-HHHHHHHHTTEEEEEE
T ss_pred ----HHhhCCCceEEEeCCCCCH-HHHHHHHHhcccceec
Confidence 3334678889999988765 5677778999987633
No 460
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.99 E-value=0.12 Score=48.85 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHH
Q 014581 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALR 241 (422)
Q Consensus 162 ~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~ 241 (422)
.+...+.|+++.+.|||.|+||..++. ....+.+..+++++++.+++||.|=-+ -.++++++.+
T Consensus 33 ~~~a~~~a~~~v~~GAdiIDIg~~s~~-----------~eE~~rv~~vi~~l~~~~~~pisIDT~-----~~~v~~aal~ 96 (271)
T 2yci_X 33 PRPIQEWARRQAEKGAHYLDVNTGPTA-----------DDPVRVMEWLVKTIQEVVDLPCCLDST-----NPDAIEAGLK 96 (271)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCSCS-----------SCHHHHHHHHHHHHHHHCCCCEEEECS-----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcCc-----------hhHHHHHHHHHHHHHHhCCCeEEEeCC-----CHHHHHHHHH
Confidence 456677788888889999999985532 134677888999998888999988422 2567888888
Q ss_pred c--CCCEE
Q 014581 242 S--GSEGV 247 (422)
Q Consensus 242 a--Gadgi 247 (422)
+ |++-|
T Consensus 97 a~~Ga~iI 104 (271)
T 2yci_X 97 VHRGHAMI 104 (271)
T ss_dssp HCCSCCEE
T ss_pred hCCCCCEE
Confidence 8 88755
No 461
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.96 E-value=0.51 Score=46.45 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+ ++||++-...+ ..+..+++
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTT---------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la 147 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTT---------GEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHAT 147 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccc---------cChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHH
Confidence 467888999999989999999887431 2222334455556666655543 68999976543 23467889
Q ss_pred HHHHHcCCCEEEEecCC
Q 014581 237 RVALRSGSEGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGadgi~v~n~~ 253 (422)
+.+.++|+|++.+....
T Consensus 148 ~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 148 EQGFAVGMHAALHINPY 164 (360)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 99999999999888644
No 462
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=93.93 E-value=0.92 Score=44.69 Aligned_cols=146 Identities=13% Similarity=0.050 Sum_probs=79.7
Q ss_pred CCeEEEEeCCC---CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIMEE---YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~~---~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.||+++=+.+ ...+.-..+++.+++.|.-+.- +.- ...+ .+++. .-...++...+.|++.-+
T Consensus 86 ~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~v---Gs~--------~~~l-e~~~~--~~~~v~r~~P~~~~iani 151 (365)
T 3sr7_A 86 DFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVT---GSY--------STAL-KNPDD--TSYQVKKSRPHLLLATNI 151 (365)
T ss_dssp SSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-------------------------------------CCEEEEE
T ss_pred cCceEeccccCCCcchhHHHHHHHHHHHHcCCCeec---ccc--------cccc-cCccc--cceEehhhCCCCcEEEEe
Confidence 56888766532 2344456677888888865542 110 0011 22222 112122333478888877
Q ss_pred CCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCC
Q 014581 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305 (422)
Q Consensus 226 ~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~ 305 (422)
.+.. ...+..+.+...|+|++.++-...+ |...| .|... ...-++.|+++++.+
T Consensus 152 g~~~-~~e~~~~~ve~~~adal~ihln~~q------e~~~p---------~Gd~~----~~~~~~~I~~l~~~~------ 205 (365)
T 3sr7_A 152 GLDK-PYQAGLQAVRDLQPLFLQVHINLMQ------ELLMP---------EGERE----FRSWKKHLSDYAKKL------ 205 (365)
T ss_dssp ETTS-CHHHHHHHHHHHCCSCEEEEECHHH------HHTSS---------SSCCC----CHHHHHHHHHHHHHC------
T ss_pred CCCC-CHHHHHHHHHhcCCCEEEEeccccc------cccCC---------CCCCc----HHHHHHHHHHHHHhh------
Confidence 7653 3455677777899999987633221 11111 01110 111236777888775
Q ss_pred CCceEEEecCC---CCHHHHHHHHHhCCCEEEEh
Q 014581 306 KDYSLSGIGGV---ETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 306 ~~ipIIa~GGI---~s~~da~~~l~aGAd~V~vg 336 (422)
++||+.=+ | .+++++..+..+|||+|-++
T Consensus 206 -~~PVivK~-vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 206 -QLPFILKE-VGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp -CSCEEEEE-CSSCCCHHHHHHHHHHTCCEEECC
T ss_pred -CCCEEEEE-CCCCCCHHHHHHHHHcCCCEEEEe
Confidence 78998874 7 79999999999999999884
No 463
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=93.91 E-value=0.59 Score=44.38 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC-CChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI-TDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~-~~~~~~a~~ 238 (422)
.+.+.+.+.++++.+.|+|+|-++-+. |....-+.+.-.++++.+.+.+.. |++-...+- .+..++++.
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~ 85 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTT---------GLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKY 85 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTT---------TTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHH
Confidence 467788899999988999999887431 333334556667778877776655 777665532 246788999
Q ss_pred HHHcCCCEEEEecCCc
Q 014581 239 ALRSGSEGVSAINTIM 254 (422)
Q Consensus 239 l~~aGadgi~v~n~~~ 254 (422)
++++|+|++.+.....
T Consensus 86 A~~~Gadavlv~~P~y 101 (286)
T 2r91_A 86 AESRGAEAVASLPPYY 101 (286)
T ss_dssp HHHTTCSEEEECCSCS
T ss_pred HHhcCCCEEEEcCCcC
Confidence 9999999998876543
No 464
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.87 E-value=0.26 Score=46.61 Aligned_cols=137 Identities=7% Similarity=-0.030 Sum_probs=77.5
Q ss_pred HHHHHHHHHhhccCccEEEEECCCCCC---hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCC
Q 014581 205 LLEEVCGWINAKATVPVWAKMTPNITD---ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl~~~~~~---~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG 281 (422)
.+.+.++.+|+.-+..++.-++...++ ..++++.+.++|+|.|.+...+.. |.-|-..-+. ........|.+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSD-P~aDGpvIq~---a~~rAL~~G~~- 80 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSD-PLADGPTIQG---ANLRALAAKTT- 80 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCC-GGGCCSHHHH---HHHHHHHTTCC-
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC-CCCCCHHHHH---HHHHHHHcCCC-
Confidence 356677777766566777777766554 577888999999999988866532 1111100000 00000001211
Q ss_pred CCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC-------HHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHH
Q 014581 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET-------GGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354 (422)
Q Consensus 282 ~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s-------~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l 354 (422)
....++.|+++++.. .++||+..+ -.+ .+=+.++..+|+|+|-+.-.-+.+ .+++
T Consensus 81 ---~~~~~~~v~~~r~~~------~~~Pivlm~-Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee--------~~~~ 142 (271)
T 3nav_A 81 ---PDICFELIAQIRARN------PETPIGLLM-YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNE--------SQPF 142 (271)
T ss_dssp ---HHHHHHHHHHHHHHC------TTSCEEEEE-CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGG--------CHHH
T ss_pred ---HHHHHHHHHHHHhcC------CCCCEEEEe-cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHH--------HHHH
Confidence 013356677777652 178998875 111 223556667999999986433221 3445
Q ss_pred HHHHHHcCCC
Q 014581 355 KDFMKMHNFS 364 (422)
Q Consensus 355 ~~~m~~~G~~ 364 (422)
.+.++++|..
T Consensus 143 ~~~~~~~gl~ 152 (271)
T 3nav_A 143 VAAAEKFGIQ 152 (271)
T ss_dssp HHHHHHTTCE
T ss_pred HHHHHHcCCe
Confidence 5566677764
No 465
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=93.87 E-value=5.9 Score=39.66 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=60.8
Q ss_pred CceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHH
Q 014581 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLK 138 (422)
Q Consensus 59 Pi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~ 138 (422)
+++...|.+ ++-..+.+.++||-++-+-+...... +.....|++..++++ .+++++
T Consensus 65 ~~~~~~ga~--d~~sA~~~~~aGf~Aiy~SG~~vAa~-------------------~~~s~~G~PD~~~~~---~~ev~~ 120 (429)
T 1f8m_A 65 EWVNALGAL--TGNMAVQQVRAGLKAIYLSGWQVAGD-------------------ANLSGHTYPDQSLYP---ANSVPQ 120 (429)
T ss_dssp SCEEEEBCC--SHHHHHHHHHTTCSCEEECHHHHHHH-------------------CCTTCCCCCSSSCSC---TTHHHH
T ss_pred CceecCCCC--CHHHHHHHHHcCCCEEEechHHHhcc-------------------cccccCCCCCcccCC---HHHHHH
Confidence 445556664 57667778888988887665432110 001123555555444 344444
Q ss_pred HHHHHHhhC-----------------CCCeEEEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEc
Q 014581 139 EFKQLKALY-----------------PDKILIASIMEEY-NKAAWEELIDRVEETGIDAIEVN 183 (422)
Q Consensus 139 ~i~~~k~~~-----------------~~~pvi~si~~~~-~~~~~~~~a~~~~~aGaD~iElN 183 (422)
.++++.+.. ...||++-+-.|+ +.....+.++.++++|+.+|.|.
T Consensus 121 ~v~~I~~a~~~~d~~~~~~~~~~~~d~~~PIiaD~DtGfG~~~nv~~tvk~~i~AGaaGi~IE 183 (429)
T 1f8m_A 121 VVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGGALNVYELQKALIAAGVAGSHWE 183 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTTTSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhccCccccCCCCEEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 443333221 0379999996554 34467789999999999999885
No 466
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=93.85 E-value=0.77 Score=44.50 Aligned_cols=164 Identities=9% Similarity=0.010 Sum_probs=89.4
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++++++..++..+. -+. -...+++...++.+..+|+|.|-+-++.-..-...+.+.+.++..+.+.++++..++. ..
T Consensus 60 v~~i~~~~~~~~i~-~l~-r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~ 136 (325)
T 3eeg_A 60 VVEITKAVTRPTIC-ALT-RAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV-VH 136 (325)
T ss_dssp HHHHHHHCCSSEEE-EEC-CSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT-SS
T ss_pred HHHHHHhCCCCEEE-Eee-cCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CC
Confidence 44444444444433 332 2346666666666666788877664432111011233445556667777888887776 34
Q ss_pred cEEEEECC----CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchh-HHHHHHH
Q 014581 220 PVWAKMTP----NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI-ALGKVMS 294 (422)
Q Consensus 220 Pv~vKl~~----~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~-al~~v~~ 294 (422)
.+.+-..- +.+...++++.+.++|++.|.+..|.+. . .|. ..+.++.
T Consensus 137 ~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~-----------------------~-----~P~~v~~lv~~ 188 (325)
T 3eeg_A 137 EVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY-----------------------M-----LPWQYGERIKY 188 (325)
T ss_dssp EEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC-----------------------C-----CHHHHHHHHHH
T ss_pred EEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCC-----------------------c-----CHHHHHHHHHH
Confidence 44332210 1112568889999999998877766432 1 132 2355666
Q ss_pred HHHHhhccCCCCCceEEE----ecCCCCHHHHHHHHHhCCCEEEEhhH
Q 014581 295 IAKMMKSEFNDKDYSLSG----IGGVETGGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 295 i~~~~~~~~~~~~ipIIa----~GGI~s~~da~~~l~aGAd~V~vgta 338 (422)
+++.+++. .++||-. .-|.. -..++.++.+||+.|..+-.
T Consensus 189 l~~~~~~~---~~~~i~~H~Hnd~GlA-~AN~laA~~aGa~~vd~tv~ 232 (325)
T 3eeg_A 189 LMDNVSNI---DKAILSAHCHNDLGLA-TANSLAALQNGARQVECTIN 232 (325)
T ss_dssp HHHHCSCG---GGSEEEECBCCTTSCH-HHHHHHHHHHTCCEEEEBGG
T ss_pred HHHhCCCC---CceEEEEEeCCCCCHH-HHHHHHHHHhCCCEEEEecc
Confidence 66665310 0155543 22332 34577888899999987743
No 467
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.84 E-value=1.9 Score=40.83 Aligned_cols=158 Identities=15% Similarity=0.115 Sum_probs=91.1
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccC-CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFS-CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~s-cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~ 238 (422)
.+.++..++++.+.++|++.||+-.. +|...+ .+ +...++++.+++..+.|+.+=+ ++ .+.++.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p------~~----~~~~e~~~~i~~~~~~~v~~l~-~n----~~~i~~ 87 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVP------QL----ADSREVMAGIRRADGVRYSVLV-PN----MKGYEA 87 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCG------GG----TTHHHHHHHSCCCSSSEEEEEC-SS----HHHHHH
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccc------cc----cCHHHHHHHHHhCCCCEEEEEe-CC----HHHHHH
Confidence 46788899999999999999998631 121100 01 1234667777665466665433 33 456788
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEE----Eec
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLS----GIG 314 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipII----a~G 314 (422)
+.++|++.|.+...... ...+. . ..-. ....++.+.++.+...+. ++.|. .++
T Consensus 88 a~~~G~~~V~i~~~~S~---~h~~~-~---------~~~~------~~e~~~~~~~~v~~a~~~----G~~V~~~l~~~~ 144 (295)
T 1ydn_A 88 AAAAHADEIAVFISASE---GFSKA-N---------INCT------IAESIERLSPVIGAAIND----GLAIRGYVSCVV 144 (295)
T ss_dssp HHHTTCSEEEEEEESCH---HHHHH-H---------TSSC------HHHHHHHHHHHHHHHHHT----TCEEEEEEECSS
T ss_pred HHHCCCCEEEEEEecCH---HHHHH-H---------cCCC------HHHHHHHHHHHHHHHHHc----CCeEEEEEEEEe
Confidence 89999999877642211 00000 0 0000 122344444444433321 45553 112
Q ss_pred -----CCCCHHHHHHHH----HhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 315 -----GVETGGDAAEFI----LLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 315 -----GI~s~~da~~~l----~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
+-.+++.+.+++ .+||+.+.++...=.--|..+.++.+.+.
T Consensus 145 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~ 194 (295)
T 1ydn_A 145 ECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVL 194 (295)
T ss_dssp EETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHH
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHH
Confidence 567899988887 48999999995433233777777766664
No 468
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=93.82 E-value=0.45 Score=45.82 Aligned_cols=85 Identities=19% Similarity=0.091 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC-CCChHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN-ITDITEPA 236 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~-~~~~~~~a 236 (422)
.+.+.+.+.++.+.+.|+|+|-++-+. |....-+.+.-.++++.+.+.. ++||++-...+ ..+..+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la 95 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTT---------AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFV 95 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTT---------TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHH
Confidence 355678889999989999999887431 2233345566667777776654 68999977653 23467889
Q ss_pred HHHHHcCC-CEEEEecCC
Q 014581 237 RVALRSGS-EGVSAINTI 253 (422)
Q Consensus 237 ~~l~~aGa-dgi~v~n~~ 253 (422)
+.+.++|+ |++.+....
T Consensus 96 ~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 96 KEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHSCCCSEEEEECCC
T ss_pred HHHHhcCCCcEEEEcCCC
Confidence 99999997 999888644
No 469
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.72 E-value=1 Score=44.40 Aligned_cols=160 Identities=14% Similarity=0.111 Sum_probs=86.2
Q ss_pred CCeEEEEeCCCC---CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIMEEY---NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~~~---~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.|++++=++.. .++.-..+++.+.+.|+.++-=.++ + . .++++ ++....|.++.+
T Consensus 71 ~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~---~-----------~---~ieev----~~~~~~~~~~QL 129 (370)
T 1gox_A 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWA---T-----------S---SVEEV----ASTGPGIRFFQL 129 (370)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEECTTC---S-----------S---CHHHH----HTTCCCCEEEEE
T ss_pred CCceeEcccchhhhccchHHHHHHHHHHHcCCCeeccCCC---C-----------C---CHHHH----HhhcCCCceEEE
Confidence 468777665311 2344456778888888866531111 0 0 12333 333346888887
Q ss_pred C--CCCCChHHHHHHHHHcCCCEEEEecCCccc--ccccccCCC--C-CCC---CCC--CCccCCCCCCCc--------c
Q 014581 226 T--PNITDITEPARVALRSGSEGVSAINTIMSV--MGIDLKTLR--P-EPC---VEG--YSTPGGYSCKAV--------H 285 (422)
Q Consensus 226 ~--~~~~~~~~~a~~l~~aGadgi~v~n~~~~~--~~id~e~~~--p-~~~---~~~--~~~~gG~sG~~i--------~ 285 (422)
- .+.....++++.+.++|+++|.++-..+.. -.-|+...- | ..+ +.. +.......|+.. .
T Consensus 130 y~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~ 209 (370)
T 1gox_A 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQID 209 (370)
T ss_dssp CCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBC
T ss_pred ecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcC
Confidence 3 221124678888999999999876432110 000110000 0 000 000 000000112111 1
Q ss_pred -hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhh
Q 014581 286 -PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337 (422)
Q Consensus 286 -p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgt 337 (422)
...++.|.++++.+ ++||+ .+|+.+++++..+..+|||+|.++.
T Consensus 210 ~~~~~~~i~~l~~~~-------~~pv~-vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 210 RSLSWKDVAWLQTIT-------SLPIL-VKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp TTCCHHHHHHHHHHC-------CSCEE-EECCCSHHHHHHHHHTTCSEEEECC
T ss_pred ccchHHHHHHHHHHh-------CCCEE-EEecCCHHHHHHHHHcCCCEEEECC
Confidence 23456677888775 78988 4788999999999999999999954
No 470
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.69 E-value=0.21 Score=49.25 Aligned_cols=82 Identities=11% Similarity=0.073 Sum_probs=55.9
Q ss_pred hHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEE
Q 014581 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLS 311 (422)
Q Consensus 232 ~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipII 311 (422)
..++++.+.+.|++||++.++++....++. ..-.+.++.+.+...+ ++|||
T Consensus 82 l~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~------------------------eEr~~vi~~~ve~~~g-----rvpVi 132 (360)
T 4dpp_A 82 YDDLVNIQIQNGAEGVIVGGTTGEGQLMSW------------------------DEHIMLIGHTVNCFGG-----SIKVI 132 (360)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCH------------------------HHHHHHHHHHHHHHTT-----TSEEE
T ss_pred HHHHHHHHHHcCCCEEEecccccChhhCCH------------------------HHHHHHHHHHHHHhCC-----CCeEE
Confidence 467778888999999999988765322211 1123455666666643 78988
Q ss_pred EecCCCCHHHHHHHH----HhCCCEEEEhhHHHhh
Q 014581 312 GIGGVETGGDAAEFI----LLGANTVQVCTGVMMH 342 (422)
Q Consensus 312 a~GGI~s~~da~~~l----~aGAd~V~vgtall~~ 342 (422)
+.-|-.+-+++++.. .+|||++++-+..+..
T Consensus 133 aGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k 167 (360)
T 4dpp_A 133 GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 167 (360)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 866656677766654 4799999999886543
No 471
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=93.69 E-value=1.4 Score=40.57 Aligned_cols=86 Identities=8% Similarity=0.015 Sum_probs=53.4
Q ss_pred eEEEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECCC
Q 014581 151 ILIASIMEE-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~~ 228 (422)
.+.+.|. + .+.++..+.++.+.+.|+|+||+=+-+-.. .+.+.+.+.++.+|+.. ++|+++-+++.
T Consensus 5 ~Icvpi~-~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-----------~~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATIT-PQLSIEETLIQKINHRIDAIDVLELRIDQFEN-----------VTVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEEC-CCC---CHHHHHHHHTTTTCSEEEEECTTSTT-----------CCHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEec-CCCCHHHHHHHHHHhhhcCCCEEEEEeccccc-----------CCHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 3778887 5 677777777777777799999997643211 13567888888888877 79999977643
Q ss_pred C-----C-C---hHHHHHHHHHc-CCCEEE
Q 014581 229 I-----T-D---ITEPARVALRS-GSEGVS 248 (422)
Q Consensus 229 ~-----~-~---~~~~a~~l~~a-Gadgi~ 248 (422)
. . + -.++.+.+.+. ++|+|.
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iD 102 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMID 102 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEE
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 1 1 1 23455555555 477664
No 472
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.67 E-value=1.2 Score=42.29 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=68.9
Q ss_pred HHHHHHhhCCCCeEEEEeCC--------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHH
Q 014581 139 EFKQLKALYPDKILIASIME--------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVC 210 (422)
Q Consensus 139 ~i~~~k~~~~~~pvi~si~~--------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv 210 (422)
.++.+++. +..+-+.|+. ..+++.+.++++.+.++|+|.|-|- -.+ |. ..|+.+.+++
T Consensus 125 ~v~~a~~~--G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~--Dt~-------G~---~~P~~~~~lv 190 (295)
T 1ydn_A 125 VIGAAIND--GLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG--DTI-------GR---GTPDTVAAML 190 (295)
T ss_dssp HHHHHHHT--TCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE--ETT-------SC---CCHHHHHHHH
T ss_pred HHHHHHHc--CCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec--CCC-------CC---cCHHHHHHHH
Confidence 34555553 6677655532 1378889999999999999987654 111 21 4789999999
Q ss_pred HHHhhccC-ccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 211 GWINAKAT-VPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 211 ~~vr~~~~-iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+++++.++ +|+.+-.-.+..-...-+.++.++|++.|.++
T Consensus 191 ~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~s 231 (295)
T 1ydn_A 191 DAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDAS 231 (295)
T ss_dssp HHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEec
Confidence 99999886 89998774444434445667788999988653
No 473
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.67 E-value=2.1 Score=40.80 Aligned_cols=158 Identities=20% Similarity=0.207 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccC-CCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFS-CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~s-cP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~ 238 (422)
.+.++-.++++.+.++|++.||+-.. .|... .. + .+ .+++++.+.+..+.|+.+=+ ++ .+.++.
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~--~~----~-~d---~~~~~~~~~~~~~~~~~~l~-~~----~~~i~~ 91 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWV--PQ----M-AG---SAEVFAGIRQRPGVTYAALA-PN----LKGFEA 91 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTC--GG----G-TT---HHHHHHHSCCCTTSEEEEEC-CS----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccc--cc----c-cC---HHHHHHHhhhcCCCEEEEEe-CC----HHHHHH
Confidence 46788889999999999999999742 23211 11 1 12 23556666655566665522 32 467788
Q ss_pred HHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEE----e-
Q 014581 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSG----I- 313 (422)
Q Consensus 239 l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa----~- 313 (422)
+.++|++.|.++..... ++.+.. -+.+ +...++.+.++.+..++. ++.|-+ .
T Consensus 92 a~~aG~~~v~i~~~~s~---~~~~~~------------~~~s----~ee~l~~~~~~v~~a~~~----G~~V~~~l~~~~ 148 (302)
T 2ftp_A 92 ALESGVKEVAVFAAASE---AFSQRN------------INCS----IKDSLERFVPVLEAARQH----QVRVRGYISCVL 148 (302)
T ss_dssp HHHTTCCEEEEEEESCH---HHHHHH------------HSSC----HHHHHHHHHHHHHHHHHT----TCEEEEEEECTT
T ss_pred HHhCCcCEEEEEEecCH---HHHHHH------------hCCC----HHHHHHHHHHHHHHHHHC----CCeEEEEEEEEe
Confidence 88999999887653321 111000 0000 122344444444443321 455531 1
Q ss_pred ----cCCCCHHHHHHHH----HhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 314 ----GGVETGGDAAEFI----LLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 314 ----GGI~s~~da~~~l----~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
.|-.+++.+.+++ .+|||.+.++...=.--|..+.++.+.++
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVA 198 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHT
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHH
Confidence 2457899988887 58999999995443333777777777664
No 474
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.57 E-value=0.62 Score=43.64 Aligned_cols=136 Identities=14% Similarity=0.041 Sum_probs=68.9
Q ss_pred HHHHHHHHhhccCccEEEEEC---CCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCC
Q 014581 206 LEEVCGWINAKATVPVWAKMT---PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282 (422)
Q Consensus 206 v~~iv~~vr~~~~iPv~vKl~---~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~ 282 (422)
+.+.++.+|+.-+..++.-+. |+.....++++.+.++|+|.|.+...+.. +.-|-..-+.. .......|++
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sd-P~adgp~i~~a---~~~al~~G~~-- 77 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSD-PVADGPTIQVA---HEVALKNGIR-- 77 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSC-CTTSCHHHHHH---HHHHHHTTCC--
T ss_pred HHHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCC-cccccHHHHHH---HHHHHHcCCC--
Confidence 445555555443333343333 33334678899999999999988654321 10010000000 0000001110
Q ss_pred CcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCC-------HHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHH
Q 014581 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET-------GGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355 (422)
Q Consensus 283 ~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s-------~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~ 355 (422)
....++.++++++.++ ++|++..+ ..+ .+.+.++..+|+|+|.+...-. ++ ..++.
T Consensus 78 --~~~~~~~v~~ir~~~~------~~Pi~~m~-y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~-------ee-~~~~~ 140 (262)
T 2ekc_A 78 --FEDVLELSETLRKEFP------DIPFLLMT-YYNPIFRIGLEKFCRLSREKGIDGFIVPDLPP-------EE-AEELK 140 (262)
T ss_dssp --HHHHHHHHHHHHHHCT------TSCEEEEC-CHHHHHHHCHHHHHHHHHHTTCCEEECTTCCH-------HH-HHHHH
T ss_pred --HHHHHHHHHHHHhhcC------CCCEEEEe-cCcHHHHhhHHHHHHHHHHcCCCEEEECCCCH-------HH-HHHHH
Confidence 0123455666766542 68888863 223 2455667789999988853221 22 33445
Q ss_pred HHHHHcCCC
Q 014581 356 DFMKMHNFS 364 (422)
Q Consensus 356 ~~m~~~G~~ 364 (422)
+.+.++|+.
T Consensus 141 ~~~~~~gl~ 149 (262)
T 2ekc_A 141 AVMKKYVLS 149 (262)
T ss_dssp HHHHHTTCE
T ss_pred HHHHHcCCc
Confidence 567778764
No 475
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=93.55 E-value=0.69 Score=44.07 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC-CChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI-TDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~-~~~~~~a~~ 238 (422)
.+.+.+.+.++++.+.|+|+|-++-+ + |....-+.+.-.++++.+.+..+. |++-...+- .+..++++.
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~Gt---t------GE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~ 86 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGT---T------GLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKL 86 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST---T------TTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---c------cChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHH
Confidence 46778889999998899999988742 1 333334556677788888777655 777665532 246788899
Q ss_pred HHHcCCCEEEEecCCc
Q 014581 239 ALRSGSEGVSAINTIM 254 (422)
Q Consensus 239 l~~aGadgi~v~n~~~ 254 (422)
+.++|+|++.+.....
T Consensus 87 A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 87 SKDFDIVGIASYAPYY 102 (293)
T ss_dssp GGGSCCSEEEEECCCS
T ss_pred HHhcCCCEEEEcCCCC
Confidence 9999999998886543
No 476
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=93.55 E-value=0.44 Score=42.64 Aligned_cols=88 Identities=20% Similarity=0.274 Sum_probs=61.9
Q ss_pred HHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCc
Q 014581 140 FKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219 (422)
Q Consensus 140 i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~i 219 (422)
++.+|+. +...|-.+. -.+...|....+.++....|++|+= |-. +-++++++++.+++
T Consensus 94 i~~Ak~~--gL~tIqR~F-liDS~al~~~~~~i~~~~PD~iEiL---PGi----------------~p~iI~~i~~~~~~ 151 (192)
T 3kts_A 94 IMKAKQH--KMLAIQRLF-MIDSSAYNKGVALIQKVQPDCIELL---PGI----------------IPEQVQKMTQKLHI 151 (192)
T ss_dssp HHHHHHT--TCEEEEEEE-CCSHHHHHHHHHHHHHHCCSEEEEE---CTT----------------CHHHHHHHHHHHCC
T ss_pred HHHHHHC--CCeEEEEEE-EEEcchHHHHHHHHhhcCCCEEEEC---Cch----------------hHHHHHHHHHhcCC
Confidence 4555553 455554443 3466778888888888889999975 221 22467777777899
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecC
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINT 252 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~ 252 (422)
||++- ..+ ...+.+..+.++||++|+.+|.
T Consensus 152 PiIaG--GlI-~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 152 PVIAG--GLI-ETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp CEEEE--SSC-CSHHHHHHHHTTTEEEEEECCG
T ss_pred CEEEE--CCc-CCHHHHHHHHHcCCeEEEeCCH
Confidence 99983 333 4467888999999999988774
No 477
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.52 E-value=0.82 Score=49.15 Aligned_cols=109 Identities=11% Similarity=0.113 Sum_probs=62.9
Q ss_pred HHHHHHHHhhC-CCCeEEEEeC-------CCCC-HHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHH
Q 014581 137 LKEFKQLKALY-PDKILIASIM-------EEYN-KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207 (422)
Q Consensus 137 l~~i~~~k~~~-~~~pvi~si~-------~~~~-~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~ 207 (422)
++.++.+++.. ++.||++-+. ++.+ .++..++++.+++ ++|+++++.+.-....... .......+....
T Consensus 203 ~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~-~~~~~~~~~~~~ 280 (729)
T 1o94_A 203 LETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDA-GPSRFYQQGHTI 280 (729)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTS-CCTTTCCTTTTH
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeeccccccccc-CCccccCccccH
Confidence 34455555543 3789998773 1344 4677889999987 7999999764210000000 000000111123
Q ss_pred HHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcC-CCEEEEe
Q 014581 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSG-SEGVSAI 250 (422)
Q Consensus 208 ~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aG-adgi~v~ 250 (422)
++++.+|+.+++||+. ...+.+ .+.++.+.+.| +|+|.+.
T Consensus 281 ~~~~~i~~~~~~pvi~--~G~i~~-~~~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 281 PWVKLVKQVSKKPVLG--VGRYTD-PEKMIEIVTKGYADIIGCA 321 (729)
T ss_dssp HHHHHHHTTCSSCEEC--CSCCCC-HHHHHHHHHTTSCSBEEES
T ss_pred HHHHHHHHHCCCEEEE--eCCCCC-HHHHHHHHHCCCCCEEEeC
Confidence 5677788888999985 344544 44566666666 8987544
No 478
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=93.51 E-value=5.2 Score=37.90 Aligned_cols=164 Identities=19% Similarity=0.238 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHH
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~ 212 (422)
.+.+...++.+.+.+ +.||.+.+--+.+.+. ++++.++|+.-+-++.|.- .++.+.+..+++++.
T Consensus 59 ~~~~~~~v~~~a~~~-~VPValHlDHg~~~e~----i~~ai~~GFtSVMiDgS~l----------p~eeNi~~Tk~vv~~ 123 (286)
T 1gvf_A 59 LEEIYALCSAYSTTY-NMPLALHLDHHESLDD----IRRKVHAGVRSAMIDGSHF----------PFAENVKLVKSVVDF 123 (286)
T ss_dssp HHHHHHHHHHHHHHT-TSCBEEEEEEECCHHH----HHHHHHTTCCEEEECCTTS----------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCcEEEEcCCCCCHHH----HHHHHHcCCCeEEECCCCC----------CHHHHHHHHHHHHHH
Confidence 455555555555555 7899999964445433 3444567999998886621 134555667777776
Q ss_pred HhhccCccEEEEEC---------------CCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccC
Q 014581 213 INAKATVPVWAKMT---------------PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277 (422)
Q Consensus 213 vr~~~~iPv~vKl~---------------~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~g 277 (422)
.+.. ++.|=.-|. ..++++.+..+...+.|+|.+-+.-.+ ..|
T Consensus 124 ah~~-gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt---------------------~HG 181 (286)
T 1gvf_A 124 CHSQ-DCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGT---------------------AHG 181 (286)
T ss_dssp HHHT-TCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSC---------------------CSS
T ss_pred HHHc-CCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCc---------------------ccc
Confidence 6543 333322221 124677777777889999988664321 123
Q ss_pred CCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCC-CHHHHHHHHHhCCCEEEEhhHHHhh
Q 014581 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE-TGGDAAEFILLGANTVQVCTGVMMH 342 (422)
Q Consensus 278 G~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~-s~~da~~~l~aGAd~V~vgtall~~ 342 (422)
-|.|.+ .+.++.++++++.+ ++|++.=||=. .-+++.+++..|..=|=++|-+..-
T Consensus 182 ~Y~~~p--~Ld~~~L~~I~~~~-------~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a 238 (286)
T 1gvf_A 182 LYSKTP--KIDFQRLAEIREVV-------DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIA 238 (286)
T ss_dssp CCSSCC--CCCHHHHHHHHHHC-------CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred CcCCCC--ccCHHHHHHHHHhc-------CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHHHH
Confidence 333321 24456778888876 68888777544 3566899999999999999988654
No 479
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=93.46 E-value=0.2 Score=47.21 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVAL 240 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~ 240 (422)
+.+...+.|+++.+.|||.|+||.+.+.. ...+.+.+++..|++.+++||.|=-. -.++++++.
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~v-----------~~~ee~~rvv~~i~~~~~~pisIDT~-----~~~v~~aAl 86 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAVQ-----------DKVSAMEWLVEVTQEVSNLTLCLDST-----NIKAIEAGL 86 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC---------------CHHHHHHHHHHHHHTTCCSEEEEECS-----CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCC-----------ChHHHHHHHHHHHHHhCCCeEEEeCC-----CHHHHHHHH
Confidence 45667777888888899999999753322 34577888888888877899988421 256778888
Q ss_pred Hc--CCCEE
Q 014581 241 RS--GSEGV 247 (422)
Q Consensus 241 ~a--Gadgi 247 (422)
++ |++-|
T Consensus 87 ~a~~Ga~iI 95 (262)
T 1f6y_A 87 KKCKNRAMI 95 (262)
T ss_dssp HHCSSCEEE
T ss_pred hhCCCCCEE
Confidence 87 87655
No 480
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=93.30 E-value=4.3 Score=39.15 Aligned_cols=204 Identities=10% Similarity=0.030 Sum_probs=108.1
Q ss_pred HHHHHHHH-HcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCcccccccccccccCCChHHHHHHHHHHHHhhCCC
Q 014581 71 YTVMKRAF-DEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPD 149 (422)
Q Consensus 71 ~~~~~~~~-~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~ 149 (422)
.+..+++. +.|+.++-++..+.+|. ..+. +.++..+.++.+++.. +
T Consensus 83 ~~~A~~~v~~~GAdiIDIg~eStrP~--------------------------~~~v------s~ee~~~~V~~v~~~~-~ 129 (323)
T 4djd_D 83 GRWAQKCVAEYGADLIYLKLDGADPE--------------------------GANH------SVDQCVATVKEVLQAV-G 129 (323)
T ss_dssp HHHHHHHHHTTCCSEEEEECGGGCTT--------------------------TTCC------CHHHHHHHHHHHHHHC-C
T ss_pred HHHHHHHHHHcCCCEEEEcCccCCCC--------------------------CCCC------CHHHHHHHHHHHHhhC-C
Confidence 35566676 78999999886554331 0111 1566666777777654 6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCEE-EEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCC
Q 014581 150 KILIASIMEEYNKAAWEELIDRVEETGIDAI-EVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228 (422)
Q Consensus 150 ~pvi~si~~~~~~~~~~~~a~~~~~aGaD~i-ElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~ 228 (422)
.|+. |-++.++..-.+.++.+.++|++.. -||-- + .++. .++...+++ .+.||++....+
T Consensus 130 vPls--IDg~~~~T~~~eV~eaAleagag~~~lINsv--~----------~~~~----~~m~~laa~-~g~~vVlmh~~d 190 (323)
T 4djd_D 130 VPLV--VVGCGDVEKDHEVLEAVAEAAAGENLLLGNA--E----------QENY----KSLTAACMV-HKHNIIARSPLD 190 (323)
T ss_dssp SCEE--EECCSCHHHHHHHHHHHHHHTTTSCCEEEEE--B----------TTBC----HHHHHHHHH-HTCEEEEECSSC
T ss_pred ceEE--EECCCCCCCCHHHHHHHHHhcCCCCCeEEEC--C----------cccH----HHHHHHHHH-hCCeEEEEccch
Confidence 6754 5322334333456666666776631 33410 0 0122 233333333 388999865434
Q ss_pred CCChHHHHHHHHHcCC--CEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHH-hh--ccC
Q 014581 229 ITDITEPARVALRSGS--EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM-MK--SEF 303 (422)
Q Consensus 229 ~~~~~~~a~~l~~aGa--dgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~-~~--~~~ 303 (422)
+.-..++.+.+.++|+ +-|++=-.+.. + |.. ...++..+..+++. +. ..
T Consensus 191 ~~~~~~l~~~a~~~GI~~e~IIlDPg~g~-----------------------f-gk~-~e~~l~~l~~ir~~al~~~~~- 244 (323)
T 4djd_D 191 INICKQLNILINEMNLPLDHIVIDPSIGG-----------------------L-GYG-IEYSFSIMERIRLGALQGDKM- 244 (323)
T ss_dssp HHHHHHHHHHHHTTTCCGGGEEEECCCCC-----------------------T-TTT-HHHHHHHHHHHHHHHHHTCGG-
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCCCcc-----------------------c-cCC-HHHHHHHHHHHHHHhhccccc-
Confidence 3224556667788888 44543211110 0 000 13456667777763 21 11
Q ss_pred CCCCceEEEecC---------------------------CCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHH
Q 014581 304 NDKDYSLSGIGG---------------------------VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKD 356 (422)
Q Consensus 304 ~~~~ipIIa~GG---------------------------I~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~ 356 (422)
.++|++..=+ ....-.+.-++.+|||.+.+-. |.-++.+++-++.
T Consensus 245 --lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~~~i~v~~~------p~~~~~~~~~~~~ 316 (323)
T 4djd_D 245 --LSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAGAHILLMRH------PEAVARVKENIDQ 316 (323)
T ss_dssp --GCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTTCSEEEECC------HHHHHHHHHHHHH
T ss_pred --CCCCEEEecchhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhcCCEEEEcC------HHHHHHHHHHHHH
Confidence 2788886411 0111123444568999988753 7777777777766
Q ss_pred HHHH
Q 014581 357 FMKM 360 (422)
Q Consensus 357 ~m~~ 360 (422)
+|..
T Consensus 317 l~~~ 320 (323)
T 4djd_D 317 LMVS 320 (323)
T ss_dssp HTSC
T ss_pred Hhhc
Confidence 6643
No 481
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.29 E-value=1.9 Score=40.96 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCC--------CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHH
Q 014581 135 TMLKEFKQLKALYPDKILIASIME--------EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206 (422)
Q Consensus 135 ~~l~~i~~~k~~~~~~pvi~si~~--------~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v 206 (422)
...+.++.+++. +..+-+++.. ..+++.+.++++.+.++|+|.|-|- .+ .| .-.|..+
T Consensus 122 ~~~~~i~~a~~~--G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~----DT-----~G---~~~P~~~ 187 (298)
T 2cw6_A 122 RFDAILKAAQSA--NISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG----DT-----IG---VGTPGIM 187 (298)
T ss_dssp HHHHHHHHHHHT--TCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE----ET-----TS---CCCHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec----CC-----CC---CcCHHHH
Confidence 333445556653 6677776642 1368889999999999999987654 11 12 1478999
Q ss_pred HHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEE
Q 014581 207 EEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSA 249 (422)
Q Consensus 207 ~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v 249 (422)
.++++++++.. ++||.+=.-.+..-...-+.++.++|++.|..
T Consensus 188 ~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~ 231 (298)
T 2cw6_A 188 KDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDS 231 (298)
T ss_dssp HHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEe
Confidence 99999999887 58998876655544444456778999998865
No 482
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.26 E-value=2.3 Score=40.15 Aligned_cols=83 Identities=8% Similarity=-0.012 Sum_probs=48.8
Q ss_pred HHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc-CccEEEEECC-CCCCh---HHHHHHHHHc
Q 014581 168 LIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTP-NITDI---TEPARVALRS 242 (422)
Q Consensus 168 ~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~-~iPv~vKl~~-~~~~~---~~~a~~l~~a 242 (422)
.|+.++++|+|+|-+.-|.-+. ..++-....-..+.+...+++|++.+ +.||++=+.- .+.+. .+-+.++.++
T Consensus 41 sA~l~e~aG~d~ilvGdSl~~~--~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 41 FAALLDRANVDVQLIGDSLGNV--LQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRA 118 (275)
T ss_dssp HHHHHHHTTCSEEEECTTHHHH--TTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECcHHHHH--HcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 4677888999999543221000 00000001123455556667777776 4889999875 24443 4445677888
Q ss_pred CCCEEEEecC
Q 014581 243 GSEGVSAINT 252 (422)
Q Consensus 243 Gadgi~v~n~ 252 (422)
|+++|.+-+.
T Consensus 119 Ga~aVklEdg 128 (275)
T 3vav_A 119 GAQMVKFEGG 128 (275)
T ss_dssp TCSEEEEECC
T ss_pred CCCEEEECCc
Confidence 9999976653
No 483
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.18 E-value=1.6 Score=41.67 Aligned_cols=104 Identities=7% Similarity=0.057 Sum_probs=71.5
Q ss_pred HHHHHHHH----HHHHhhCCCCeEEEEeCCC--------CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc
Q 014581 133 LETMLKEF----KQLKALYPDKILIASIMEE--------YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG 200 (422)
Q Consensus 133 ~e~~l~~i----~~~k~~~~~~pvi~si~~~--------~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~ 200 (422)
.++.++.+ +.+++. +..+-+.|+.. .+++.+.++++.+.++|+|.|-|- .+ .|.
T Consensus 119 ~ee~l~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~----DT-----~G~--- 184 (302)
T 2ftp_A 119 IKDSLERFVPVLEAARQH--QVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG----DT-----IGV--- 184 (302)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE----ES-----SSC---
T ss_pred HHHHHHHHHHHHHHHHHC--CCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe----CC-----CCC---
Confidence 45555443 444443 55666665421 468889999999999999976553 21 121
Q ss_pred cChhHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 201 QDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 201 ~~~~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
..|..+.++++++++.+ ++||.+=.--+..-...-+.++.++|++.|..+
T Consensus 185 ~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~t 235 (302)
T 2ftp_A 185 GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSS 235 (302)
T ss_dssp CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEec
Confidence 47899999999999988 689988764444444556677889999988543
No 484
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.15 E-value=0.26 Score=50.44 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCce
Q 014581 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309 (422)
Q Consensus 230 ~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ip 309 (422)
.+..+.++.+.++|+|.|.+.... |. ....++.++++++.++ ++|
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~------------------------G~-----~~~~~e~i~~i~~~~p------~~p 280 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH------------------------GH-----SRRVIETLEMIKADYP------DLP 280 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC------------------------CS-----SHHHHHHHHHHHHHCT------TSC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC------------------------Cc-----hHHHHHHHHHHHHHCC------Cce
Confidence 356778889999999998774321 11 1234677888888763 588
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 310 LSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 310 IIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
|+. |++.+.+++.++..+|||+|.++
T Consensus 281 vi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 281 VVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp EEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred EEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 876 67889999999999999999984
No 485
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=93.13 E-value=1.6 Score=41.26 Aligned_cols=104 Identities=16% Similarity=0.251 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCC----C---CCHHHHHHHHHHHHHhC-CCEEEEccCCCCCCCccccccccccChh
Q 014581 133 LETMLKEFKQLKALYPDKILIASIME----E---YNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCR 204 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~----~---~~~~~~~~~a~~~~~aG-aD~iElN~scP~~~~~~~~G~~l~~~~~ 204 (422)
.+.+.+.+..+++..++.|+|+.+.. | .+.+++.++.+.+.+.| +|+|++.+..| .+
T Consensus 82 ~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~---------------~~ 146 (276)
T 3o1n_A 82 AESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTG---------------DD 146 (276)
T ss_dssp HHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGC---------------HH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCC---------------HH
Confidence 45666667777776557899998852 2 25678888888887888 99999987433 24
Q ss_pred HHHHHHHHHhhccCccEEEEE-----CCCCCChHHHHHHHHHcCCCEEEEecC
Q 014581 205 LLEEVCGWINAKATVPVWAKM-----TPNITDITEPARVALRSGSEGVSAINT 252 (422)
Q Consensus 205 ~v~~iv~~vr~~~~iPv~vKl-----~~~~~~~~~~a~~l~~aGadgi~v~n~ 252 (422)
.+.++++..++. +..|++-- +|..+++.+..+.+.+.|+|-+.+.-+
T Consensus 147 ~~~~l~~~a~~~-~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~ 198 (276)
T 3o1n_A 147 EVKATVGYAHQH-NVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVM 198 (276)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHHHhC-CCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 566666654443 55666632 232223556667778889998877643
No 486
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=93.12 E-value=2.1 Score=42.73 Aligned_cols=152 Identities=13% Similarity=0.076 Sum_probs=94.0
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhcc--CccEEEEECCC
Q 014581 151 ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA--TVPVWAKMTPN 228 (422)
Q Consensus 151 pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~--~iPv~vKl~~~ 228 (422)
|+.++.....++++..+.++...+.|+..+-+..+... +...+.++++|+.. ++.|.|=....
T Consensus 178 ~~y~s~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~---------------~~~~~~v~~vR~~~g~~~~l~vDaN~~ 242 (412)
T 4h1z_A 178 AAYISGLPEDTRAKRAELAAAWQAKGFSSFKFASPVAD---------------DGVAKEMEILRERLGPAVRIACDMHWA 242 (412)
T ss_dssp EEEECCCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGCT---------------TCHHHHHHHHHHHHCSSSEEEEECCSC
T ss_pred EEEeccCCCCcHHHHHHHHHHHHhcCcceeccccccch---------------hhHHHHHHHHHhccCCeEEEEeccccC
Confidence 45555443456788888888888889999988753211 11233455666654 66777765554
Q ss_pred CC--ChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCC
Q 014581 229 IT--DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDK 306 (422)
Q Consensus 229 ~~--~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~ 306 (422)
++ +..++++.+.+.|+..|- +|.+ +..++..+++++..
T Consensus 243 ~~~~~A~~~~~~l~~~~l~~iE----------------qP~~-----------------~~d~~~~~~l~~~~------- 282 (412)
T 4h1z_A 243 HTASEAVALIKAMEPHGLWFAE----------------APVR-----------------TEDIDGLARVAASV------- 282 (412)
T ss_dssp CCHHHHHHHHHHHGGGCEEEEE----------------CCSC-----------------TTCHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHhhcccccceec----------------CCCC-----------------ccchHHHHHHHhhc-------
Confidence 43 245666777777654331 2322 12245556777765
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-CCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCC
Q 014581 307 DYSLSGIGGVETGGDAAEFILLG-ANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363 (422)
Q Consensus 307 ~ipIIa~GGI~s~~da~~~l~aG-Ad~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~ 363 (422)
++||.+.=-+.+..|+.+++..| +|.+|+--. ..|..-..++ ....+.+|+
T Consensus 283 ~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~--~GGit~~~ki----a~~A~~~gi 334 (412)
T 4h1z_A 283 STAIAVGEEWRTVHDMVPRVARRALAIVQPEMG--HKGITQFMRI----GAYAHVHHI 334 (412)
T ss_dssp SSEEEECTTCCSHHHHHHHHHTTCCSEECCCHH--HHHHHHHHHH----HHHHHHTTC
T ss_pred CCccccCCcccchHhHHHHHHcCCCCEEEecCC--CCChHHHHHH----HHHHHHCCC
Confidence 79999999999999999999877 578886532 2343333333 334455555
No 487
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.10 E-value=1.4 Score=43.50 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=85.6
Q ss_pred CCeEEEEeCC--C-CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIME--E-YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~--~-~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.||+++=+. + ..++.-..+++.+.+.|+...--.++. .. ++++.... .+.|+++-|
T Consensus 80 ~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s--------------~~---le~v~~~~---~~~~~~~QL 139 (368)
T 2nli_A 80 KAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG--------------AT---FEEISEGL---NGGPRWFQI 139 (368)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS--------------SC---HHHHHHHH---TTCCEEEEE
T ss_pred CCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh--------------HH---HHHHHHhC---CCCCEEEEE
Confidence 4688876432 2 223222667777888888766322110 11 22332211 267888887
Q ss_pred CC--CCCChHHHHHHHHHcCCCEEEEecCCcc--cccccccCC--CCCC--CCC----CCCccCCC---CCCCcchhHHH
Q 014581 226 TP--NITDITEPARVALRSGSEGVSAINTIMS--VMGIDLKTL--RPEP--CVE----GYSTPGGY---SCKAVHPIALG 290 (422)
Q Consensus 226 ~~--~~~~~~~~a~~l~~aGadgi~v~n~~~~--~~~id~e~~--~p~~--~~~----~~~~~gG~---sG~~i~p~al~ 290 (422)
-. +.....+.++.+.++|++++.++-..+. .-..|.... -|.. ... .......+ ....-....++
T Consensus 140 y~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~ 219 (368)
T 2nli_A 140 YMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPR 219 (368)
T ss_dssp CCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHH
T ss_pred eccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHH
Confidence 43 2122567888899999999877632111 000111110 0100 000 00000011 00001234567
Q ss_pred HHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 291 ~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
.|+.+++.. ++||+.- ||.+.+|+..+..+|||+|.+.
T Consensus 220 ~i~~lr~~~-------~~PvivK-~v~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 220 DIEEIAGHS-------GLPVFVK-GIQHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp HHHHHHHHS-------SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHc-------CCCEEEE-cCCCHHHHHHHHHcCCCEEEEc
Confidence 788888876 7888876 4789999999999999999994
No 488
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=93.00 E-value=0.96 Score=44.20 Aligned_cols=111 Identities=11% Similarity=0.008 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE-c----------cC--CCCCCCcccccccc
Q 014581 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEV-N----------FS--CPHGMPERKMGAAV 199 (422)
Q Consensus 133 ~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iEl-N----------~s--cP~~~~~~~~G~~l 199 (422)
++...+.++.+++.. +.||++-+..+.+. .++++.++++|+|+|.+ | +. .|...+...+|+.-
T Consensus 178 ~e~l~~il~av~~~~-~~PV~vKi~p~~~~---~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlS 253 (345)
T 3oix_A 178 FETTDQILSEVFTYF-TKPLGIKLPPYFDI---VHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIG 253 (345)
T ss_dssp HHHHHHHHHHHTTTC-CSCEEEEECCCCCH---HHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEE
T ss_pred HHHHHHHHHHHHHHh-CCCeEEEECCCCCH---HHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcC
Confidence 455555566666654 78999999754444 44555565666655431 1 11 11110011112111
Q ss_pred c-cChhHHHHHHHHHhhcc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 200 G-QDCRLLEEVCGWINAKA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 200 ~-~~~~~v~~iv~~vr~~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
+ .......+++..+++.+ ++||+. ...+.+... +..+..+|||+|.+.
T Consensus 254 G~ai~p~a~~~v~~i~~~~~~~ipIIg--~GGI~s~~d-a~~~l~aGAd~V~ig 304 (345)
T 3oix_A 254 GDYVKPTALANVHAFYKRLNPSIQIIG--TGGVXTGRD-AFEHILCGASMVQIG 304 (345)
T ss_dssp EGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSCCSHHH-HHHHHHHTCSEEEES
T ss_pred CccccHHHHHHHHHHHHHcCCCCcEEE--ECCCCChHH-HHHHHHhCCCEEEEC
Confidence 1 12233457788888887 689886 456666554 444456999998654
No 489
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=92.91 E-value=0.86 Score=44.53 Aligned_cols=85 Identities=19% Similarity=0.066 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCC-CChHHHHHH
Q 014581 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI-TDITEPARV 238 (422)
Q Consensus 160 ~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~-~~~~~~a~~ 238 (422)
.+.+.+.+.++.+.+.|+|+|-++-+ .|....-+.+.-.++++. .-.-++||++-+..+- .+..++++.
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg~~st~eai~la~~ 113 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGS---------MGDWPLLTDEQRMEGVER-LVKAGIPVIVGTGAVNTASAVAHAVH 113 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSG---------GGTGGGSCHHHHHHHHHH-HHHTTCCEEEECCCSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc---------CcChhhCCHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 46778889999998899999988742 133333444555566665 2223789999876542 346788999
Q ss_pred HHHcCCCEEEEecCCc
Q 014581 239 ALRSGSEGVSAINTIM 254 (422)
Q Consensus 239 l~~aGadgi~v~n~~~ 254 (422)
+.++|+|++.+.....
T Consensus 114 A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 114 AQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHTCSEEEECCCCS
T ss_pred HHhcCCCEEEECCCcc
Confidence 9999999998876543
No 490
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.85 E-value=1.4 Score=42.99 Aligned_cols=99 Identities=15% Similarity=0.080 Sum_probs=70.4
Q ss_pred HHHHHHHhhCCCCeEEEEe--CCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh
Q 014581 138 KEFKQLKALYPDKILIASI--MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi~si--~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~ 215 (422)
+.++.+++. +..+.+++ ....+++.+.++++.+.++|++.|-+- -+ .|. ..|..+.++++++++
T Consensus 124 ~~i~~ak~~--G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~----DT-----~G~---~~P~~v~~lv~~l~~ 189 (345)
T 1nvm_A 124 QHIEYARNL--GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA----DS-----GGA---MSMNDIRDRMRAFKA 189 (345)
T ss_dssp HHHHHHHHH--TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE----CT-----TCC---CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC----CC-----cCc---cCHHHHHHHHHHHHH
Confidence 344555554 56777777 334578889999999999999976543 11 121 358999999999999
Q ss_pred cc--CccEEEEECCCCCChHHHHHHHHHcCCCEEEEe
Q 014581 216 KA--TVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250 (422)
Q Consensus 216 ~~--~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~ 250 (422)
.+ ++||.+=.--+..-...-+.++.++|++.|..+
T Consensus 190 ~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~t 226 (345)
T 1nvm_A 190 VLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDAS 226 (345)
T ss_dssp HSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred hcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEec
Confidence 98 789988655444444555667889999988654
No 491
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=92.79 E-value=0.54 Score=45.53 Aligned_cols=104 Identities=9% Similarity=0.030 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhCCCCeEEEE-eCCCCCHHHHHHHHHHHHHhCCCEEEEcc--CC--------CCCCC-ccccccccccCh
Q 014581 136 MLKEFKQLKALYPDKILIAS-IMEEYNKAAWEELIDRVEETGIDAIEVNF--SC--------PHGMP-ERKMGAAVGQDC 203 (422)
Q Consensus 136 ~l~~i~~~k~~~~~~pvi~s-i~~~~~~~~~~~~a~~~~~aGaD~iElN~--sc--------P~~~~-~~~~G~~l~~~~ 203 (422)
+.+.++.+++ . +.||++- +..+.++++ +++++++|+|+|.+.- +. .+..+ ...+. +...+
T Consensus 170 ~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~--~~~g~ 241 (332)
T 1vcf_A 170 LVERLAELLP-L-PFPVMVKEVGHGLSREA----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPEL--CEIGI 241 (332)
T ss_dssp HHHHHHHHCS-C-SSCEEEECSSSCCCHHH----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CC--TTCSC
T ss_pred HHHHHHHHHc-C-CCCEEEEecCCCCCHHH----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhH--hhccc
Confidence 4556777777 5 8899998 543445554 6788889999999832 10 00000 00000 00001
Q ss_pred hHHHHHHHHHhhcc-CccEEEEECCCCCChHHHHHHHHHcCCCEEEEec
Q 014581 204 RLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 204 ~~v~~iv~~vr~~~-~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n 251 (422)
...+.+..+++.+ ++||++ ...+.+...+++.+ ..|||+|.+.-
T Consensus 242 -~~~~~l~~v~~~~~~ipvia--~GGI~~~~d~~kal-~~GAd~V~igr 286 (332)
T 1vcf_A 242 -PTARAILEVREVLPHLPLVA--SGGVYTGTDGAKAL-ALGADLLAVAR 286 (332)
T ss_dssp -BHHHHHHHHHHHCSSSCEEE--ESSCCSHHHHHHHH-HHTCSEEEECG
T ss_pred -cHHHHHHHHHHhcCCCeEEE--ECCCCCHHHHHHHH-HhCCChHhhhH
Confidence 1234455566666 799987 45666666666555 47999987653
No 492
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.78 E-value=0.46 Score=47.39 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=56.2
Q ss_pred cEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHh
Q 014581 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299 (422)
Q Consensus 220 Pv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~ 299 (422)
++.+-+... .+..+.++.+.++|+|+|.+ |...+ . ....++.|+.+++.+
T Consensus 143 ~~~~~i~~~-~~~~~~a~~~~~~G~d~i~i-~~~~g-----------------------~-----~~~~~e~i~~ir~~~ 192 (404)
T 1eep_A 143 RVGAAVSID-IDTIERVEELVKAHVDILVI-DSAHG-----------------------H-----STRIIELIKKIKTKY 192 (404)
T ss_dssp CCEEEECSC-TTHHHHHHHHHHTTCSEEEE-CCSCC-----------------------S-----SHHHHHHHHHHHHHC
T ss_pred eEEEEeCCC-hhHHHHHHHHHHCCCCEEEE-eCCCC-----------------------C-----hHHHHHHHHHHHHHC
Confidence 455555432 34567788889999999876 32110 0 123456777777765
Q ss_pred hccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEE
Q 014581 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335 (422)
Q Consensus 300 ~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~v 335 (422)
+ ++||++ |++.+.+++.++..+|||+|.+
T Consensus 193 ~------~~pviv-~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 193 P------NLDLIA-GNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp T------TCEEEE-EEECSHHHHHHHHTTTCSEEEE
T ss_pred C------CCeEEE-cCCCcHHHHHHHHhcCCCEEEE
Confidence 3 688887 7788999999999999999999
No 493
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=92.76 E-value=6.7 Score=37.07 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=79.7
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhc------------
Q 014581 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK------------ 216 (422)
Q Consensus 149 ~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~------------ 216 (422)
+.++++.+. ..++.+ .+++.++|+++|-+ |.. .+++.+++++++++..
T Consensus 89 ~~~~~VRv~-~~d~~d----i~~~ld~ga~~Iml----P~V-----------~saeea~~~~~~~~~~p~G~Rg~g~~~~ 148 (287)
T 2v5j_A 89 PSQPVVRPS-WNDPVQ----IKQLLDVGTQTLLV----PMV-----------QNADEAREAVRATRYPPAGIRGVGSALA 148 (287)
T ss_dssp SSEEEEECS-SSCHHH----HHHHHHTTCCEEEE----SCC-----------CSHHHHHHHHHHTSCTTTSCCCGGGTTT
T ss_pred CCCEEEEEC-CCCHHH----HHHHHhCCCCEEEe----CCC-----------CCHHHHHHHHHHhccCccCccccccchh
Confidence 678999996 455543 34445679998764 443 2334455555544311
Q ss_pred ----------------cCccEEEEECCCCCChHHHHHHHHH-cCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCC
Q 014581 217 ----------------ATVPVWAKMTPNITDITEPARVALR-SGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279 (422)
Q Consensus 217 ----------------~~iPv~vKl~~~~~~~~~~a~~l~~-aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~ 279 (422)
.+++|++++=. .....-++.+.+ -|+|+|.+.- .++-.+ -|+
T Consensus 149 ra~~~g~~~~y~~~~~~~~~vi~mIEt--~~av~n~deIaa~~~vD~l~iG~-----~DLs~~--------------lg~ 207 (287)
T 2v5j_A 149 RASRWNRIPDYLQKANDQMCVLVQIET--REAMKNLPQILDVEGVDGVFIGP-----ADLSAD--------------MGY 207 (287)
T ss_dssp GGGTTTTSTTHHHHHHHHCEEEEEECS--HHHHHTHHHHHTSTTEEEEEECH-----HHHHHH--------------TTS
T ss_pred hhhhccchhhhHhhcCCCcEEEEEECc--HHHHHHHHHHhCcCCCCEEEECH-----HHHHHH--------------hCC
Confidence 13678888721 111222333333 3788886532 122111 111
Q ss_pred CCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhH
Q 014581 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338 (422)
Q Consensus 280 sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgta 338 (422)
.+...+|.-+..++++..+.... ++|+.... .+++.+..++..|.+.+.+++-
T Consensus 208 ~~~~~~p~v~~a~~~iv~aaraa----G~~~gv~~--~d~~~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 208 AGNPQHPEVQAAIEQAIVQIRES----GKAPGILI--ANEQLAKRYLELGALFVAVGVD 260 (287)
T ss_dssp TTCCCSHHHHHHHHHHHHHHHHT----TSEEEEEC--CCHHHHHHHHHTTCSEEEEEEH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHc----CCeeEEec--CCHHHHHHHHHhCCCEEEECcH
Confidence 12222455555666665555331 67665443 4899999999999999999974
No 494
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.76 E-value=0.42 Score=46.54 Aligned_cols=175 Identities=10% Similarity=0.071 Sum_probs=0.0
Q ss_pred cccccccccCCChHHHHHHHHHHHHh------hCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCcc
Q 014581 120 IGWENIELISDRPLETMLKEFKQLKA------LYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPER 193 (422)
Q Consensus 120 ~Gl~n~~~~s~~~~e~~l~~i~~~k~------~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~ 193 (422)
.|+..+|..+...-+.=.+.++++++ ..++..+.+=+.+.. -++++.++|+|.|.+-++.-..-...
T Consensus 54 ~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-------~i~~a~~~g~~~v~i~~~~s~~~~~~ 126 (337)
T 3ble_A 54 LNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK-------TVDWIKDSGAKVLNLLTKGSLHHLEK 126 (337)
T ss_dssp TCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH-------HHHHHHHHTCCEEEEEEECSHHHHHH
T ss_pred cCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh-------hHHHHHHCCCCEEEEEEecCHHHHHH
Q ss_pred ccccccccChhHHHHHHHHHhhccCccEEEEECC-------CCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCC
Q 014581 194 KMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP-------NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRP 266 (422)
Q Consensus 194 ~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~-------~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p 266 (422)
..+.+..+..+.+.++++..|+. .+.+.+-+.. +.....++++.+.++|++.|.+.+|.
T Consensus 127 ~~~~s~~e~l~~~~~~v~~ak~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~------------- 192 (337)
T 3ble_A 127 QLGKTPKEFFTDVSFVIEYAIKS-GLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTL------------- 192 (337)
T ss_dssp HTCCCHHHHHHHHHHHHHHHHHT-TCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTT-------------
T ss_pred HhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCC-------------
Q ss_pred CCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEe----cCCCCHHHHHHHHHhCCCEEEEh
Q 014581 267 EPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGI----GGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 267 ~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~----GGI~s~~da~~~l~aGAd~V~vg 336 (422)
|-.......+.++.+++.++ ++||-.= -|.. ...++.++.+||+.|..+
T Consensus 193 --------------G~~~P~~v~~lv~~l~~~~p------~~~i~~H~Hnd~GlA-~AN~laAv~aGa~~vd~t 245 (337)
T 3ble_A 193 --------------GVLSPEETFQGVDSLIQKYP------DIHFEFHGHNDYDLS-VANSLQAIRAGVKGLHAS 245 (337)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHCT------TSCEEEECBCTTSCH-HHHHHHHHHTTCSEEEEB
T ss_pred --------------CCcCHHHHHHHHHHHHHhcC------CCeEEEEecCCcchH-HHHHHHHHHhCCCEEEEe
No 495
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=92.75 E-value=2.8 Score=41.37 Aligned_cols=159 Identities=13% Similarity=0.032 Sum_probs=86.2
Q ss_pred CCeEEEEeCCC--C-CHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEE
Q 014581 149 DKILIASIMEE--Y-NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225 (422)
Q Consensus 149 ~~pvi~si~~~--~-~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl 225 (422)
+.||+++=+.+ . .++.-..+++.++++|+.++--. ... .. ++++... .+.|.+..+
T Consensus 72 ~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss----~s~----------~~---le~i~~~----~~~~~~fQl 130 (380)
T 1p4c_A 72 SMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST----ASN----------MS---IEDLARQ----CDGDLWFQL 130 (380)
T ss_dssp SSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECT----TCS----------SC---HHHHHHH----CCSCEEEEE
T ss_pred CCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCc----ccc----------CC---HHHHHhc----cCCCeEEEE
Confidence 46887765532 1 33344567777888887664211 110 01 2233221 256778776
Q ss_pred CCCC-CChHHHHHHHHHcCCCEEEEecCCccccc--ccccCCCCCC---CC--------CCCCccCC--C---CCCC-cc
Q 014581 226 TPNI-TDITEPARVALRSGSEGVSAINTIMSVMG--IDLKTLRPEP---CV--------EGYSTPGG--Y---SCKA-VH 285 (422)
Q Consensus 226 ~~~~-~~~~~~a~~l~~aGadgi~v~n~~~~~~~--id~e~~~p~~---~~--------~~~~~~gG--~---sG~~-i~ 285 (422)
-..- ....++++++.++|+++++++-..+.... .|+...-+.+ .. ......++ + .+.. -.
T Consensus 131 y~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p 210 (380)
T 1p4c_A 131 YVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDA 210 (380)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCT
T ss_pred EechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCc
Confidence 4221 22567888899999999887532211000 0111100000 00 00000010 0 0100 01
Q ss_pred hhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEh
Q 014581 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336 (422)
Q Consensus 286 p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vg 336 (422)
+..++.|+++++.+ ++||+.- ||.+.+++.+++.+|||+|.++
T Consensus 211 ~~~~~~i~~i~~~~-------~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 211 SFNWEALRWLRDLW-------PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp TCCHHHHHHHHHHC-------CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred cccHHHHHHHHHhc-------CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 34567788888876 7898865 5899999999999999999994
No 496
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.73 E-value=1.3 Score=39.34 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHHHHHHhh---ccCccEEEEECCCCCChHHHHHHHH
Q 014581 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA---KATVPVWAKMTPNITDITEPARVAL 240 (422)
Q Consensus 164 ~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~---~~~iPv~vKl~~~~~~~~~~a~~l~ 240 (422)
++.+.++.+.+.|+|+|++.. |+. .++...+.++.+++ ..++|+++. + .++.+.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~--~~~------------~~~~~~~~~~~l~~~~~~~~v~v~v~------~---~~~~a~ 83 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI--KNA------------PTREMYEIGKTLRQLTREYDALFFVD------D---RVDVAL 83 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC--CSC------------CHHHHHHHHHHHHHHHHHTTCEEEEE------S---CHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEECC--CCC------------CHHHHHHHHHHHHHHHHHcCCeEEEc------C---hHHHHH
Confidence 556777888889999999874 332 11222233333332 246788873 1 235677
Q ss_pred HcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHH
Q 014581 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG 320 (422)
Q Consensus 241 ~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~ 320 (422)
++|+|+|.+.... . + .+. +++... ++.+.. .+.+.+
T Consensus 84 ~~gad~v~l~~~~-------------------------~------~--~~~---~~~~~~------~~~~~v--~~~t~~ 119 (215)
T 1xi3_A 84 AVDADGVQLGPED-------------------------M------P--IEV---AKEIAP------NLIIGA--SVYSLE 119 (215)
T ss_dssp HHTCSEEEECTTS-------------------------C------C--HHH---HHHHCT------TSEEEE--EESSHH
T ss_pred HcCCCEEEECCcc-------------------------C------C--HHH---HHHhCC------CCEEEE--ecCCHH
Confidence 8999999654210 0 1 122 222211 222221 257899
Q ss_pred HHHHHHHhCCCEEEEhh
Q 014581 321 DAAEFILLGANTVQVCT 337 (422)
Q Consensus 321 da~~~l~aGAd~V~vgt 337 (422)
++.++...|+|.|.+.+
T Consensus 120 e~~~~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 120 EALEAEKKGADYLGAGS 136 (215)
T ss_dssp HHHHHHHHTCSEEEEEC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 99998899999999854
No 497
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=92.69 E-value=1.9 Score=40.20 Aligned_cols=100 Identities=15% Similarity=0.249 Sum_probs=61.8
Q ss_pred HHHHHHHhhCCCCeEE-EEeCCCCCHHHHHHHHHHHHHhCCCEEEEc-cCCC--CCCCccccccccccChhHHHHHHHHH
Q 014581 138 KEFKQLKALYPDKILI-ASIMEEYNKAAWEELIDRVEETGIDAIEVN-FSCP--HGMPERKMGAAVGQDCRLLEEVCGWI 213 (422)
Q Consensus 138 ~~i~~~k~~~~~~pvi-~si~~~~~~~~~~~~a~~~~~aGaD~iElN-~scP--~~~~~~~~G~~l~~~~~~v~~iv~~v 213 (422)
..++++++. +.|+. ... ++.- .|+.++++|+|+|=+. .+.- +..+.. ..-..+.+...++.|
T Consensus 10 ~~lr~l~~~--~~~i~~~~a---yD~~----sA~~~~~aG~dai~vg~~s~a~~~G~pD~-----~~vt~~em~~~~~~I 75 (255)
T 2qiw_A 10 TKFASDHES--GKLLVLPTV---WDTW----SAGLVEEAGFSGLTIGSHPVADATGSSDG-----ENMNFADYMAVVKKI 75 (255)
T ss_dssp HHHHHHHHT--CCCEECCEE---SSHH----HHHHHHHTTCSCEEECHHHHHHHTTCCTT-----TCSCHHHHHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEecC---cCHH----HHHHHHHcCCCEEEEChHHHHHhCCCCCC-----CCcCHHHHHHHHHHH
Confidence 346666653 34443 233 4432 3567778999999875 1110 111100 012445566667777
Q ss_pred hhccCccEEEEECCCCCC-hHHHHHHHHHcCCCEEEEec
Q 014581 214 NAKATVPVWAKMTPNITD-ITEPARVALRSGSEGVSAIN 251 (422)
Q Consensus 214 r~~~~iPv~vKl~~~~~~-~~~~a~~l~~aGadgi~v~n 251 (422)
.+.++.||++=+...+.+ ..+.++.+.++|+++|.+=+
T Consensus 76 ~r~~~~pviaD~~~Gyg~~~~~~~~~l~~aGa~gv~iEd 114 (255)
T 2qiw_A 76 TSAVSIPVSVDVESGYGLSPADLIAQILEAGAVGINVED 114 (255)
T ss_dssp HHHCSSCEEEECTTCTTCCHHHHHHHHHHTTCCEEEECS
T ss_pred HhcCCCCEEeccCCCcCcHHHHHHHHHHHcCCcEEEECC
Confidence 777789999998766643 47778889999999997654
No 498
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=92.61 E-value=1.7 Score=41.36 Aligned_cols=106 Identities=16% Similarity=0.240 Sum_probs=65.6
Q ss_pred ChHHHHHHHHHHHHhhCCCCeEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHHHHH
Q 014581 131 RPLETMLKEFKQLKALYPDKILIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEV 209 (422)
Q Consensus 131 ~~~e~~l~~i~~~k~~~~~~pvi~si~~-~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v~~i 209 (422)
...+.+.++|+.+++...+..+=+-+.. -.+.++...+++.+.++|+|+|-...+-.. .|+.+ .+.+.++++
T Consensus 155 g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~------~GAT~-edv~lmr~~ 227 (288)
T 3oa3_A 155 KRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNG------PGASI-ENVSLMSAV 227 (288)
T ss_dssp TCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS------CCCCH-HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC------CCCCH-HHHHHHHHH
Confidence 3467788889988887644222222221 246777788888888999999987632110 11111 123333333
Q ss_pred HHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEE
Q 014581 210 CGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVS 248 (422)
Q Consensus 210 v~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~ 248 (422)
++ ....++-||.+..+.+. +-+..+.++||+.|-
T Consensus 228 v~----~~g~~v~VKAAGGIrt~-edAl~mi~aGA~RiG 261 (288)
T 3oa3_A 228 CD----SLQSETRVKASGGIRTI-EDCVKMVRAGAERLG 261 (288)
T ss_dssp HH----HSSSCCEEEEESSCCSH-HHHHHHHHTTCSEEE
T ss_pred HH----HhCCCceEEEeCCCCCH-HHHHHHHHcCCceee
Confidence 32 22467889999887764 567778889999773
No 499
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=92.60 E-value=7.3 Score=39.49 Aligned_cols=165 Identities=16% Similarity=0.185 Sum_probs=0.0
Q ss_pred cccccccccCCCh--------HHHHHHHHHHHHhhCCCCeEEEEeCCCC--------CHHHHHHHHHHHHHhCCCEEEEc
Q 014581 120 IGWENIELISDRP--------LETMLKEFKQLKALYPDKILIASIMEEY--------NKAAWEELIDRVEETGIDAIEVN 183 (422)
Q Consensus 120 ~Gl~n~~~~s~~~--------~e~~l~~i~~~k~~~~~~pvi~si~~~~--------~~~~~~~~a~~~~~aGaD~iElN 183 (422)
.|+..+|.+++.. .+.-.+.++.+++..|+.++.+=+. +. ..+-....++++.++|+|.|.+-
T Consensus 42 ~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R-~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if 120 (464)
T 2nx9_A 42 IGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLR-GQNLLGYRHYADDVVDTFVERAVKNGMDVFRVF 120 (464)
T ss_dssp SCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEEC-GGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEec-cccccCcccccchhhHHHHHHHHhCCcCEEEEE
Q ss_pred cCCCCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC------hHHHHHHHHHcCCCEEEEecCCcccc
Q 014581 184 FSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD------ITEPARVALRSGSEGVSAINTIMSVM 257 (422)
Q Consensus 184 ~scP~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~------~~~~a~~l~~aGadgi~v~n~~~~~~ 257 (422)
.++ ++.+.+.+.++.+++. ...+.+-++..... ..++++.+.++|++.|.+-.|.+..
T Consensus 121 ~~~--------------sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~- 184 (464)
T 2nx9_A 121 DAM--------------NDVRNMQQALQAVKKM-GAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGIL- 184 (464)
T ss_dssp CTT--------------CCTHHHHHHHHHHHHT-TCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCC-
T ss_pred Eec--------------CHHHHHHHHHHHHHHC-CCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCc-
Q ss_pred cccccCCCCCCCCCCCCccCCCCCCCcchhHH-HHHHHHHHHhhccCCCCCceEEEe----cCCCCHHHHHHHHHhCCCE
Q 014581 258 GIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL-GKVMSIAKMMKSEFNDKDYSLSGI----GGVETGGDAAEFILLGANT 332 (422)
Q Consensus 258 ~id~e~~~p~~~~~~~~~~gG~sG~~i~p~al-~~v~~i~~~~~~~~~~~~ipIIa~----GGI~s~~da~~~l~aGAd~ 332 (422)
.|... +.|+.+++.+ ++||-.= -|.. ...+++++.+||+.
T Consensus 185 ---------------------------~P~~v~~lv~~l~~~~-------~~~i~~H~Hnd~GlA-vAN~laAv~AGa~~ 229 (464)
T 2nx9_A 185 ---------------------------TPYAAEELVSTLKKQV-------DVELHLHCHSTAGLA-DMTLLKAIEAGVDR 229 (464)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHC-------CSCEEEEECCTTSCH-HHHHHHHHHTTCSE
T ss_pred ---------------------------CHHHHHHHHHHHHHhc-------CCeEEEEECCCCChH-HHHHHHHHHhCCCE
Q ss_pred EEEh
Q 014581 333 VQVC 336 (422)
Q Consensus 333 V~vg 336 (422)
|..+
T Consensus 230 VD~t 233 (464)
T 2nx9_A 230 VDTA 233 (464)
T ss_dssp EEEB
T ss_pred EEEe
No 500
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.58 E-value=0.59 Score=44.39 Aligned_cols=76 Identities=16% Similarity=0.107 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC--CCCCCccccccccccChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHH
Q 014581 161 NKAAWEELIDRVEETGIDAIEVNFSC--PHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238 (422)
Q Consensus 161 ~~~~~~~~a~~~~~aGaD~iElN~sc--P~~~~~~~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~ 238 (422)
+.+...+.++++.+.|||.|+||.-+ |.... -+.....+.+..+++.+++. ++||.|=. .-.+.+++
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~-----v~~~eE~~Rv~pvi~~l~~~-~~piSIDT-----~~~~va~a 95 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRPGATR-----VDPAVETSRVIPVVKELAAQ-GITVSIDT-----MRADVARA 95 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC-------------------HHHHHHHHHHHHHT-TCCEEEEC-----SCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCC-----CCHHHHHHHHHHHHHHhhcC-CCEEEEeC-----CCHHHHHH
Confidence 56777888888888899999999622 22100 01123345556666777665 88998742 23678889
Q ss_pred HHHcCCCEE
Q 014581 239 ALRSGSEGV 247 (422)
Q Consensus 239 l~~aGadgi 247 (422)
+.++|++-|
T Consensus 96 Al~aGa~iI 104 (280)
T 1eye_A 96 ALQNGAQMV 104 (280)
T ss_dssp HHHTTCCEE
T ss_pred HHHcCCCEE
Confidence 999998755
Done!