BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014583
(422 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|402715756|gb|AFQ93696.1| acyl-CoA oxidase 4 [Prunus persica]
Length = 437
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/389 (87%), Positives = 369/389 (94%)
Query: 8 HQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVR 67
+QDDV+KN R++YFN PA+D+S+AFPQATPAS FPPC SDYYQFDDLLT EEQAVR++VR
Sbjct: 6 NQDDVNKNERTNYFNSPAMDVSLAFPQATPASTFPPCTSDYYQFDDLLTPEEQAVRLRVR 65
Query: 68 ECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIAR 127
+C+EK++APIMAEYWEKAEFPFHVIPK GALR+AGGTIKGYGCPG S+T A A AEIAR
Sbjct: 66 QCLEKDVAPIMAEYWEKAEFPFHVIPKFGALRIAGGTIKGYGCPGLSITANAFATAEIAR 125
Query: 128 VDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALN 187
VDASCSTF LVHSSLAMLTIALCGSE QKQ+YLPSLA+L T+ACWALTEP YGSDASAL
Sbjct: 126 VDASCSTFFLVHSSLAMLTIALCGSEAQKQEYLPSLAELKTVACWALTEPDYGSDASALR 185
Query: 188 TTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENK 247
TTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY+VKK+ PGLT TKIENK
Sbjct: 186 TTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYIVKKNVPGLTATKIENK 245
Query: 248 IGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCH 307
IGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIG+SMGVYDMCH
Sbjct: 246 IGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGLSMGVYDMCH 305
Query: 308 RYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSW 367
RYLKERKQFGAPLAAFQINQ+KLV+MLGN+QAM+L+GWRLCKLYEKG MTPGHASLGK+W
Sbjct: 306 RYLKERKQFGAPLAAFQINQEKLVRMLGNVQAMVLIGWRLCKLYEKGKMTPGHASLGKAW 365
Query: 368 ITARARETVALGRELLGGNGILSDFLVAK 396
IT RARETVALGRELLGGNGIL+DFLVAK
Sbjct: 366 ITLRARETVALGRELLGGNGILADFLVAK 394
>gi|224139128|ref|XP_002322987.1| predicted protein [Populus trichocarpa]
gi|222867617|gb|EEF04748.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/392 (86%), Positives = 374/392 (95%)
Query: 7 KHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKV 66
K+QD+V++NARSSYFNLP LD+SVAFPQATPAS FPP SDY+Q DLLT+E+QA+RM+V
Sbjct: 5 KNQDEVEQNARSSYFNLPPLDVSVAFPQATPASTFPPSVSDYFQISDLLTAEDQAIRMRV 64
Query: 67 RECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIA 126
R+CMEKEIAPIMAEYWEKA+FPFHVIPKLGAL +AGGTIKGYGCPG S+T +A+AIAE+A
Sbjct: 65 RQCMEKEIAPIMAEYWEKAKFPFHVIPKLGALGIAGGTIKGYGCPGLSITTSAVAIAEVA 124
Query: 127 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASAL 186
RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA+ +T+ACWALTEP YGSDAS+L
Sbjct: 125 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAKFSTVACWALTEPDYGSDASSL 184
Query: 187 NTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIEN 246
TTATKVEGGWILEGQKRWIGNSTFAD+LVIFARNTTT+QINGY+VKKDAPGLTVTKIEN
Sbjct: 185 QTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTTTDQINGYIVKKDAPGLTVTKIEN 244
Query: 247 KIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMC 306
KIGLRIVQNGDI++K+VFVPDEDRLPGVNSFQDT+KVLAVSRVMVAWQPIGISMGVYDMC
Sbjct: 245 KIGLRIVQNGDIVMKRVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISMGVYDMC 304
Query: 307 HRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKS 366
HRYLKERKQFGAPLAAFQINQQKLV MLGN+QAM+LVGWRLCKLYEKG MTPGHASL KS
Sbjct: 305 HRYLKERKQFGAPLAAFQINQQKLVHMLGNVQAMVLVGWRLCKLYEKGTMTPGHASLAKS 364
Query: 367 WITARARETVALGRELLGGNGILSDFLVAKVI 398
WI+ +ARET A+GRELLGGNGILSDFLVAK +
Sbjct: 365 WISLKARETAAIGRELLGGNGILSDFLVAKAM 396
>gi|359481157|ref|XP_003632582.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like isoform 2
[Vitis vinifera]
Length = 439
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/396 (87%), Positives = 369/396 (93%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
MTI+SS + DD +K + SYF LP+LD+SVAFPQATPAS FPPCASDYYQFDDLLT EEQ
Sbjct: 1 MTIYSSNNADDSEKAKKGSYFGLPSLDVSVAFPQATPASIFPPCASDYYQFDDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+RMKVR+C+EKEIAPIM EYWEKAEFPFHV+PKL ALR+AGGTIKGYGCPG SVT +AI
Sbjct: 61 ALRMKVRKCVEKEIAPIMTEYWEKAEFPFHVVPKLAALRIAGGTIKGYGCPGLSVTASAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
AE++RVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQLNTIACWALTEP YG
Sbjct: 121 TTAEVSRVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLNTIACWALTEPDYG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS+L TTATKVEGGWILEGQKRWIGNSTFADVL+IFARNTTTNQINGY+VKK APGLT
Sbjct: 181 SDASSLKTTATKVEGGWILEGQKRWIGNSTFADVLIIFARNTTTNQINGYIVKKGAPGLT 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
TKI+NKIGLRIVQNGDI KKVFVPDEDRLPGVNSFQDT+KVLAVSRVMVAWQPIGISM
Sbjct: 241 ATKIQNKIGLRIVQNGDIQFKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G YDMCHRYLKERKQFGAPLAAFQINQQKLV+MLGNIQAM LVGWRLCKLYEKG MTPGH
Sbjct: 301 GAYDMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVGWRLCKLYEKGKMTPGH 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASL K+WIT +ARET+ALGRELLGGNGIL+DFLVAK
Sbjct: 361 ASLAKAWITLKARETLALGRELLGGNGILADFLVAK 396
>gi|255582668|ref|XP_002532113.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
gi|223528216|gb|EEF30275.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
Length = 440
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/397 (85%), Positives = 374/397 (94%), Gaps = 1/397 (0%)
Query: 1 MTIH-SSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEE 59
MTI+ SSK+QDD+D + +SSYFNLP L++S+AFPQATPAS FPPCASDY+Q DDLLT EE
Sbjct: 1 MTIYASSKNQDDLDHSQKSSYFNLPPLNVSIAFPQATPASIFPPCASDYFQLDDLLTPEE 60
Query: 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAA 119
QA+R+KVR+CMEKEIAPIM EYWEKA+FPFHVIPKLG LR+AGGTIKGYGCPG S+TG+A
Sbjct: 61 QAIRIKVRQCMEKEIAPIMTEYWEKAKFPFHVIPKLGTLRIAGGTIKGYGCPGLSLTGSA 120
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
+A AE+ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL+T+ACWALTEP Y
Sbjct: 121 VATAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLSTVACWALTEPEY 180
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGL 239
GSDASAL TTA KVEGGWIL+GQKRWIGNSTFADVLV+FARNT+T QINGY+VKKDAPGL
Sbjct: 181 GSDASALKTTARKVEGGWILDGQKRWIGNSTFADVLVVFARNTSTEQINGYIVKKDAPGL 240
Query: 240 TVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299
T TKIENKIGLR+VQNGDILLK+VF+PDEDRLPGVNSFQDT+KVLAVSRVMVAWQPIGIS
Sbjct: 241 TATKIENKIGLRMVQNGDILLKQVFIPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGIS 300
Query: 300 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPG 359
MG+YDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN+QAM+LVGWRLCKLYE G MT G
Sbjct: 301 MGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCKLYETGKMTSG 360
Query: 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
HAS+ K+WIT++ARET A GRELLGGNGIL+DFLVAK
Sbjct: 361 HASMAKAWITSKARETAATGRELLGGNGILADFLVAK 397
>gi|359481155|ref|XP_002264086.2| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like isoform 1
[Vitis vinifera]
gi|296083170|emb|CBI22806.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/393 (87%), Positives = 366/393 (93%)
Query: 4 HSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVR 63
+SS + DD +K + SYF LP+LD+SVAFPQATPAS FPPCASDYYQFDDLLT EEQA+R
Sbjct: 11 YSSNNPDDSEKAKKGSYFGLPSLDVSVAFPQATPASIFPPCASDYYQFDDLLTPEEQALR 70
Query: 64 MKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIA 123
MKVR+C+EKEIAPIM EYWEKAEFPFHV+PKL ALR+AGGTIKGYGCPG SVT +AI A
Sbjct: 71 MKVRKCVEKEIAPIMTEYWEKAEFPFHVVPKLAALRIAGGTIKGYGCPGLSVTASAITTA 130
Query: 124 EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDA 183
E++RVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQLNTIACWALTEP YGSDA
Sbjct: 131 EVSRVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLNTIACWALTEPDYGSDA 190
Query: 184 SALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTK 243
S+L TTATKVEGGWILEGQKRWIGNSTFADVL+IFARNTTTNQINGY+VKK APGLT TK
Sbjct: 191 SSLKTTATKVEGGWILEGQKRWIGNSTFADVLIIFARNTTTNQINGYIVKKGAPGLTATK 250
Query: 244 IENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVY 303
I+NKIGLRIVQNGDI KKVFVPDEDRLPGVNSFQDT+KVLAVSRVMVAWQPIGISMG Y
Sbjct: 251 IQNKIGLRIVQNGDIQFKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISMGAY 310
Query: 304 DMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASL 363
DMCHRYLKERKQFGAPLAAFQINQQKLV+MLGNIQAM LVGWRLCKLYEKG MTPGHASL
Sbjct: 311 DMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVGWRLCKLYEKGKMTPGHASL 370
Query: 364 GKSWITARARETVALGRELLGGNGILSDFLVAK 396
K+WIT +ARET+ALGRELLGGNGIL+DFLVAK
Sbjct: 371 AKAWITLKARETLALGRELLGGNGILADFLVAK 403
>gi|351722526|ref|NP_001236991.1| acyl-CoA oxidase [Glycine max]
gi|156972244|gb|ABU98950.1| acyl-CoA oxidase [Glycine max]
Length = 400
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/396 (85%), Positives = 367/396 (92%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M I+SSK+ D +NA SYF P LD+S AFPQATPAS FPPCASDY+Q D+LLT+EEQ
Sbjct: 1 MAINSSKNPDGSVQNAMPSYFYSPPLDVSAAFPQATPASTFPPCASDYFQLDNLLTAEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKEIAPIM EYWEKA+FPFHVIPKLGALR+AGGTIK YGCPG S+TG+AI
Sbjct: 61 AIRKKVRECMEKEIAPIMTEYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A+AE+ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL T+ACWALTEP YG
Sbjct: 121 AVAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLQTVACWALTEPDYG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDASAL TTATKVEGGWILEGQKRWIGNSTFADVLV+FARN +TNQING+++KKDAPGLT
Sbjct: 181 SDASALKTTATKVEGGWILEGQKRWIGNSTFADVLVVFARNASTNQINGFIIKKDAPGLT 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
VTKIENKIGLRIVQNGDI+++KVFVPDEDR+ GVNSFQDT+KVLAVSRVMVAWQPIGISM
Sbjct: 241 VTKIENKIGLRIVQNGDIVMRKVFVPDEDRIAGVNSFQDTNKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQI+QQKLVQMLGNIQAMILVGWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGQ 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASLGKSWIT RARET ALGRELLGGNGIL+DFLV +
Sbjct: 361 ASLGKSWITLRARETAALGRELLGGNGILADFLVRR 396
>gi|356521028|ref|XP_003529160.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Glycine
max]
Length = 421
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/378 (87%), Positives = 357/378 (94%)
Query: 19 SYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIM 78
SYFNLPALD+SVAFPQATPAS FPPCASDY+ F+DLL EEQAVR KVRECMEKEIAPIM
Sbjct: 3 SYFNLPALDVSVAFPQATPASNFPPCASDYFHFNDLLKPEEQAVRNKVRECMEKEIAPIM 62
Query: 79 AEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILV 138
EYWEKAEFPFHVIPK ALR+AGGTIKGYGCPG S+TG+A+A AE+ARVDASCSTF LV
Sbjct: 63 TEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPGLSITGSAVATAEVARVDASCSTFYLV 122
Query: 139 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWI 198
HSSLAMLTIALCGSE QKQKYLPSLAQ+ TIACWALTEP YGSDASAL TTATK++ GWI
Sbjct: 123 HSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKLQCGWI 182
Query: 199 LEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDI 258
L+GQKRWIGNSTFAD+LVIFARNTTTNQINGY+VKKDAPGLTVTK+ENKIGLRIVQNGDI
Sbjct: 183 LDGQKRWIGNSTFADLLVIFARNTTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDI 242
Query: 259 LLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGA 318
+++KVFVPD+DR+ GVNSFQDT+KVLAVSRVMVAWQPIG+SMG+YDMCHRYLKERKQFGA
Sbjct: 243 VMRKVFVPDDDRIEGVNSFQDTNKVLAVSRVMVAWQPIGLSMGIYDMCHRYLKERKQFGA 302
Query: 319 PLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVAL 378
PLAAFQI+QQKLVQMLGNIQAMILVGWRLCKLYE G MTPGHASLGKSWIT RARET AL
Sbjct: 303 PLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAAL 362
Query: 379 GRELLGGNGILSDFLVAK 396
GRELLGGNGIL+DFLVAK
Sbjct: 363 GRELLGGNGILADFLVAK 380
>gi|47118098|gb|AAT11172.1| putative short-chain acyl-CoA oxidase [Tropaeolum majus]
Length = 440
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/392 (83%), Positives = 357/392 (91%)
Query: 5 SSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRM 64
SS QD+ D RSSYFNLPALDI AFPQATPASK PP SDYY+FDDLLT EEQA+R+
Sbjct: 6 SSTKQDNSDNKDRSSYFNLPALDIYAAFPQATPASKLPPTVSDYYKFDDLLTPEEQALRI 65
Query: 65 KVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAE 124
KVRECMEKE+APIM EYWEKAEFPFH++PKLGALR+AGGTIKGYGCPG S+TG+AIA AE
Sbjct: 66 KVRECMEKEVAPIMTEYWEKAEFPFHIVPKLGALRIAGGTIKGYGCPGLSITGSAIATAE 125
Query: 125 IARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDAS 184
+ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL+ +ACWALTEP YGSDAS
Sbjct: 126 VARVDASCSTFILVHSSLAMLTIALCGSESQKQKYLPSLAQLSDVACWALTEPDYGSDAS 185
Query: 185 ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKI 244
L T ATKVEGGW+LEGQKRWIG +IFARNT+TNQING++VKKDAPGLT TKI
Sbjct: 186 GLRTIATKVEGGWLLEGQKRWIGTVPLQISWIIFARNTSTNQINGFIVKKDAPGLTATKI 245
Query: 245 ENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYD 304
+NKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT+KVLAVSRVMVAWQPIGISMG+YD
Sbjct: 246 QNKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISMGIYD 305
Query: 305 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364
MCHRYLK+RKQFGAPLAAFQINQQKLV MLGN+QAM+LVGWRLCKLYEKG MT G ASLG
Sbjct: 306 MCHRYLKQRKQFGAPLAAFQINQQKLVTMLGNVQAMVLVGWRLCKLYEKGQMTTGQASLG 365
Query: 365 KSWITARARETVALGRELLGGNGILSDFLVAK 396
K+WI+++ARET ALGRELLGGNGILSDFLVAK
Sbjct: 366 KAWISSKARETAALGRELLGGNGILSDFLVAK 397
>gi|224087764|ref|XP_002308225.1| predicted protein [Populus trichocarpa]
gi|222854201|gb|EEE91748.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/392 (83%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 7 KHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKV 66
K++D+V++N RSSYFNLP LD+SVAFPQATP S FPP SDYYQF DLLT E+QA+RM+V
Sbjct: 5 KNKDEVEQNPRSSYFNLPPLDVSVAFPQATPVSTFPPSVSDYYQFSDLLTVEDQALRMRV 64
Query: 67 RECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIA 126
RECMEKEIAP+M EYWEKA+FPFH IPKLGAL +AGGTIKGYGCPG S+T +AIA+AE+A
Sbjct: 65 RECMEKEIAPMMTEYWEKAKFPFHAIPKLGALGIAGGTIKGYGCPGLSITASAIAMAEVA 124
Query: 127 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASAL 186
RVDASCSTFILVHS LAMLTIA CGSEEQK KYLPSLAQ +T+ACWALTEP YGSDAS L
Sbjct: 125 RVDASCSTFILVHS-LAMLTIAFCGSEEQKLKYLPSLAQFSTVACWALTEPDYGSDASGL 183
Query: 187 NTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIEN 246
TTA KVEGGWILEG+KRWIGNSTFAD+LV+FARNTTTNQING++VKKDAPGLTVTKIEN
Sbjct: 184 KTTAIKVEGGWILEGKKRWIGNSTFADLLVVFARNTTTNQINGFIVKKDAPGLTVTKIEN 243
Query: 247 KIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMC 306
KIGLRIVQNGDI++K+VFVPDEDRLPGVNSFQDT+KVLAVSR+MVAWQPIGISMGVYDMC
Sbjct: 244 KIGLRIVQNGDIVMKRVFVPDEDRLPGVNSFQDTNKVLAVSRIMVAWQPIGISMGVYDMC 303
Query: 307 HRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKS 366
HRYLKERKQFGAPLAAFQINQQKLV MLGN+QAM+LVGWRLCKLYEK MTPG ASL K+
Sbjct: 304 HRYLKERKQFGAPLAAFQINQQKLVHMLGNVQAMVLVGWRLCKLYEKEKMTPGQASLAKA 363
Query: 367 WITARARETVALGRELLGGNGILSDFLVAKVI 398
WI+ +ARET ++GRELLGGNGIL+DFLVAK +
Sbjct: 364 WISLKARETASIGRELLGGNGILADFLVAKAL 395
>gi|297819888|ref|XP_002877827.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
gi|297323665|gb|EFH54086.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
Length = 436
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/396 (81%), Positives = 359/396 (90%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
MT+ SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQ
Sbjct: 1 MTVLSSADRASTEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T A+
Sbjct: 61 AIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAV 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP G
Sbjct: 121 ATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS L TTATKVEGGW ++GQKRWIGNSTFAD+L+IFARNTTTNQING++VKKDAPGL
Sbjct: 181 SDASGLGTTATKVEGGWKIKGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLK 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
TKI NKIGLR+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM
Sbjct: 241 ATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQ+NQQKLVQMLGN+QAM L+GWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQ 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASLGK+WIT++ARET +LGRELLGGNGIL+DFLVAK
Sbjct: 361 ASLGKAWITSKARETASLGRELLGGNGILADFLVAK 396
>gi|449439864|ref|XP_004137705.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Cucumis
sativus]
gi|449483509|ref|XP_004156611.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Cucumis
sativus]
Length = 440
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/397 (82%), Positives = 364/397 (91%), Gaps = 1/397 (0%)
Query: 1 MTIHSS-KHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEE 59
MTI + QDD DKNARSSYF LPALD+SVAFPQAT AS FPP SD+YQF+DLLT EE
Sbjct: 1 MTIDAKMNRQDDKDKNARSSYFGLPALDVSVAFPQATSASSFPPSVSDFYQFNDLLTPEE 60
Query: 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAA 119
QA+R KVR+C+EKE+APIM +YWEKAEFPF ++PKL L VAGGTIKGYGCPG ++TG+A
Sbjct: 61 QALRKKVRQCVEKEVAPIMTKYWEKAEFPFELVPKLANLGVAGGTIKGYGCPGLTITGSA 120
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
IA+AE+ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA+ +T+ACW LTEP
Sbjct: 121 IAVAEVARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAKFDTVACWGLTEPEN 180
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGL 239
GSDAS L TTATKVEGGW++EG+KRWIGNSTFAD+LVIFARNT TN+ING+++KK+APGL
Sbjct: 181 GSDASGLRTTATKVEGGWVIEGRKRWIGNSTFADILVIFARNTITNEINGFIIKKNAPGL 240
Query: 240 TVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299
TVTKIENKIGLR+VQNGDI++ KVFVPDEDRL GVNSF+DT+KVLAVSRVMVAWQPIGI+
Sbjct: 241 TVTKIENKIGLRMVQNGDIVMNKVFVPDEDRLVGVNSFKDTNKVLAVSRVMVAWQPIGIA 300
Query: 300 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPG 359
MGVYDMCHRYLKER+QFGAPLAAFQ+NQQKLV MLGN+QAM L+GWRLCKLYEKG MTPG
Sbjct: 301 MGVYDMCHRYLKEREQFGAPLAAFQLNQQKLVLMLGNVQAMFLIGWRLCKLYEKGTMTPG 360
Query: 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASLGKSWIT RARETVALGRELLGGNGILSDFLVAK
Sbjct: 361 QASLGKSWITLRARETVALGRELLGGNGILSDFLVAK 397
>gi|15231059|ref|NP_190752.1| acyl-coenzyme A oxidase 4 [Arabidopsis thaliana]
gi|62286630|sp|Q96329.1|ACOX4_ARATH RecName: Full=Acyl-coenzyme A oxidase 4, peroxisomal; Short=AOX 4;
AltName: Full=G6p; AltName: Full=Short-chain acyl-CoA
oxidase; Short=AtCX4; Short=AtG6; Short=SAOX
gi|114794822|pdb|2IX5|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4 In Complex With Acetoacetyl-Coa
gi|114794823|pdb|2IX5|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4 In Complex With Acetoacetyl-Coa
gi|114794824|pdb|2IX5|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4 In Complex With Acetoacetyl-Coa
gi|114794825|pdb|2IX5|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4 In Complex With Acetoacetyl-Coa
gi|1657621|gb|AAB18129.1| G6p [Arabidopsis thaliana]
gi|3068711|gb|AAC14411.1| putative acyl-coA dehydrogenase [Arabidopsis thaliana]
gi|5478795|dbj|BAA82478.1| Short-chain acyl CoA oxidase [Arabidopsis thaliana]
gi|20453143|gb|AAM19813.1| At3g51840/AtG6 [Arabidopsis thaliana]
gi|21593380|gb|AAM65329.1| acyl-coA dehydrogenase [Arabidopsis thaliana]
gi|21928035|gb|AAM78046.1| At3g51840/AtG6 [Arabidopsis thaliana]
gi|332645330|gb|AEE78851.1| acyl-coenzyme A oxidase 4 [Arabidopsis thaliana]
Length = 436
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/398 (81%), Positives = 357/398 (89%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQ
Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AI
Sbjct: 61 AIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP G
Sbjct: 121 ATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS L TTATKVEGGW + GQKRWIGNSTFAD+L+IFARNTTTNQING++VKKDAPGL
Sbjct: 181 SDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLK 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
TKI NKIGLR+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM
Sbjct: 241 ATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQ+NQQKLVQMLGN+QAM L+GWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQ 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
ASLGK+WI+++ARET +LGRELLGGNGIL+DFLVAK
Sbjct: 361 ASLGKAWISSKARETASLGRELLGGNGILADFLVAKAF 398
>gi|114794826|pdb|2IX6|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
gi|114794827|pdb|2IX6|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
gi|114794828|pdb|2IX6|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
gi|114794829|pdb|2IX6|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
gi|114794830|pdb|2IX6|E Chain E, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
gi|114794831|pdb|2IX6|F Chain F, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
Thaliana, Acx4
Length = 449
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/398 (81%), Positives = 357/398 (89%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQ
Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AI
Sbjct: 61 AIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP G
Sbjct: 121 ATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS L TTATKVEGGW + GQKRWIGNSTFAD+L+IFARNTTTNQING++VKKDAPGL
Sbjct: 181 SDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLK 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
TKI NKIGLR+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM
Sbjct: 241 ATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQ+NQQKLVQMLGN+QAM L+GWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQ 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
ASLGK+WI+++ARET +LGRELLGGNGIL+DFLVAK
Sbjct: 361 ASLGKAWISSKARETASLGRELLGGNGILADFLVAKAF 398
>gi|167961942|dbj|BAG09369.1| peroxisomal acyl-CoA oxidase [Glycine max]
Length = 437
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/396 (82%), Positives = 358/396 (90%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M I+SSK+ D +NA SYF P LD+S AFPQATPAS FPPCASDY+Q D+LLT+EEQ
Sbjct: 1 MAINSSKNPDGSVQNAMPSYFYSPPLDVSAAFPQATPASTFPPCASDYFQLDNLLTTEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKEIAPIM EYWEKA+FPFHVIPKLGALR+AGGTIK YGCPG S+TG+AI
Sbjct: 61 AIRKKVRECMEKEIAPIMTEYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A+AE+ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL T+ACWALTEP YG
Sbjct: 121 AVAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLQTVACWALTEPDYG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDASAL TTATKVEGGWIL GQK +ADV V++ARN + NQING+++KKDAPGLT
Sbjct: 181 SDASALKTTATKVEGGWILYGQKAEYMKQNYADVRVVYARNASANQINGFIIKKDAPGLT 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
VTKIENKIGLRIVQNGDI+++KVFVPDEDR+ GVNSFQDT+KVLAVSRVMVAWQPIGISM
Sbjct: 241 VTKIENKIGLRIVQNGDIVMRKVFVPDEDRIAGVNSFQDTNKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQI+QQKLVQMLGNIQAMILVGWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGQ 360
Query: 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASLGKSWIT RARET ALGRELLGGNGIL+DFLVAK
Sbjct: 361 ASLGKSWITLRARETAALGRELLGGNGILADFLVAK 396
>gi|356568112|ref|XP_003552257.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Glycine
max]
Length = 421
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/378 (87%), Positives = 353/378 (93%)
Query: 19 SYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIM 78
SYFN PALD+SVAFPQATPAS FPPCASDY+ F+DLL EEQAVR +VRECMEKEIAPIM
Sbjct: 3 SYFNFPALDVSVAFPQATPASTFPPCASDYFHFNDLLKPEEQAVRNRVRECMEKEIAPIM 62
Query: 79 AEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILV 138
EYWEKAEFPFHVIPK ALR+AGGTIKGYGCP S+ G+A+A AE+ARVDASCSTF LV
Sbjct: 63 TEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPDLSIAGSAVAAAEVARVDASCSTFFLV 122
Query: 139 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWI 198
HSSLAMLTIALCGSE QKQKYLPSLAQ+ TIACWALTEP YGSDASAL TTATKVEGGWI
Sbjct: 123 HSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKVEGGWI 182
Query: 199 LEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDI 258
L+GQKRWIGNSTFAD+LVIFARN TTNQINGY+VKKDAPGLTVTK+ENKIGLRIVQNGDI
Sbjct: 183 LDGQKRWIGNSTFADLLVIFARNMTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDI 242
Query: 259 LLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGA 318
++ KVFVPD+DRL GVNSFQDT+KVLAVSRVMVAWQPIG+SMG+YDMCHRYLKERKQFGA
Sbjct: 243 VMGKVFVPDDDRLEGVNSFQDTNKVLAVSRVMVAWQPIGLSMGIYDMCHRYLKERKQFGA 302
Query: 319 PLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVAL 378
PLAAFQI+QQKLVQMLGNIQAMILVGWRLCKLYE G MTPGHASLGKSWIT RARET AL
Sbjct: 303 PLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAAL 362
Query: 379 GRELLGGNGILSDFLVAK 396
GRELLGGNGIL+DFLVAK
Sbjct: 363 GRELLGGNGILADFLVAK 380
>gi|414876245|tpg|DAA53376.1| TPA: glutaryl-CoA dehydrogenase [Zea mays]
Length = 436
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/375 (78%), Positives = 336/375 (89%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPA+DIS+AFPQATPAS FPP ASDYYQ DDLLTSEE+++RMKVR MEKEIAPIM+ Y
Sbjct: 20 GLPAMDISLAFPQATPASIFPPSASDYYQSDDLLTSEERSIRMKVRGIMEKEIAPIMSAY 79
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPF+ IPKL +L VAGGTIKGYGCPG S+T +A+ ++EIARVDASCSTFILVHSS
Sbjct: 80 WEKAEFPFNAIPKLASLGVAGGTIKGYGCPGLSITASAVTMSEIARVDASCSTFILVHSS 139
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM+TIALCGSE QKQKYLPSLAQL T+ CWALTEP YGSDAS+L T ATK GGW ++G
Sbjct: 140 LAMVTIALCGSEAQKQKYLPSLAQLTTVGCWALTEPNYGSDASSLRTIATKAPGGWHIDG 199
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGNSTFADVLV+ ARN T Q+NG++V+K APGL TKIENKIGLR+VQNGDI+L
Sbjct: 200 QKRWIGNSTFADVLVVLARNADTQQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIVLN 259
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVPDEDRLPG+NSFQD SKVLA+SR+MVAWQP+GISMGV+DMCHRYLKERKQFG PLA
Sbjct: 260 KVFVPDEDRLPGINSFQDISKVLAISRIMVAWQPVGISMGVFDMCHRYLKERKQFGVPLA 319
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KL +MLGN+Q+M+LVGWRLCKLYE G MTPGHASLGK+W + ARE V+LGRE
Sbjct: 320 AFQLNQEKLARMLGNVQSMVLVGWRLCKLYESGKMTPGHASLGKAWNSRTAREVVSLGRE 379
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 380 LLGGNGILADFLVAK 394
>gi|115434652|ref|NP_001042084.1| Os01g0159400 [Oryza sativa Japonica Group]
gi|54290198|dbj|BAD61086.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
gi|113531615|dbj|BAF03998.1| Os01g0159400 [Oryza sativa Japonica Group]
gi|125524516|gb|EAY72630.1| hypothetical protein OsI_00496 [Oryza sativa Indica Group]
gi|125569115|gb|EAZ10630.1| hypothetical protein OsJ_00462 [Oryza sativa Japonica Group]
gi|215713513|dbj|BAG94650.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 433
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/375 (80%), Positives = 333/375 (88%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPALDIS+AFPQATPAS FPP ASDYYQ DDLLT+EEQ++R VR MEKEIAPIMA Y
Sbjct: 17 GLPALDISLAFPQATPASIFPPSASDYYQIDDLLTTEEQSIRKNVRAIMEKEIAPIMATY 76
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPFH IPKL +L VAGGTIKGYGCPG S+T +AI +AEIARVDASCSTFILVHSS
Sbjct: 77 WEKAEFPFHAIPKLSSLGVAGGTIKGYGCPGLSITASAITMAEIARVDASCSTFILVHSS 136
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM+TIALCGSE QKQKYLPSLAQL + CWALTEP +GSDAS+L TTATKV GGW ++G
Sbjct: 137 LAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTATKVPGGWHIDG 196
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGNSTFADVLV+ ARN T Q+NG++V+K APGL TKIENKIGLR+VQNGDI+
Sbjct: 197 QKRWIGNSTFADVLVVLARNANTKQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIVFN 256
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVP+EDRLPGVNSFQD SKVLA+SRVMVAWQPIGISMGV+D+CHRYLKERKQFG PL
Sbjct: 257 KVFVPEEDRLPGVNSFQDISKVLAISRVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLV 316
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPGHASLGK W + ARE V+LGRE
Sbjct: 317 AFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKGWTSRMAREVVSLGRE 376
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 377 LLGGNGILADFLVAK 391
>gi|302771341|ref|XP_002969089.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
gi|300163594|gb|EFJ30205.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
Length = 415
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/374 (79%), Positives = 334/374 (89%)
Query: 23 LPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
LPALD+S AFPQATPAS FPP SDY+Q DLL+ E+Q +RM+VR MEKE+APIMAEYW
Sbjct: 5 LPALDLSRAFPQATPASSFPPLVSDYFQLHDLLSKEDQDLRMRVRTVMEKEVAPIMAEYW 64
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
EKAEFPF ++PK+ +L +AGGTI+GYGCPG S+ G+AIA AE+ARVDASCSTFILVHSSL
Sbjct: 65 EKAEFPFEIVPKMASLNIAGGTIQGYGCPGLSILGSAIAAAEVARVDASCSTFILVHSSL 124
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
AMLTIA+CGSE+QKQKYLP LA+L+TIACWALTEP YGSDAS+L+TTATK +GGWIL GQ
Sbjct: 125 AMLTIAMCGSEQQKQKYLPQLAKLDTIACWALTEPDYGSDASSLSTTATKAKGGWILNGQ 184
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
KRWIGNSTFADV VIFARNT TNQING++V+K PG TKIENKIGLRIVQNGDI+LK
Sbjct: 185 KRWIGNSTFADVAVIFARNTETNQINGFIVRKGTPGYRATKIENKIGLRIVQNGDIVLKD 244
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
F+PD+DRLPG+NSF DT+KVLA+SR+MVAWQPIG++MGVYDMCHRYL ERKQFGAPLA+
Sbjct: 245 AFIPDDDRLPGINSFADTNKVLAISRIMVAWQPIGVTMGVYDMCHRYLLERKQFGAPLAS 304
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
QINQ+KLVQMLGNIQAM LVGWRLCKLY+ G MTPG ASL KSW T RARETVALGREL
Sbjct: 305 LQINQEKLVQMLGNIQAMALVGWRLCKLYDSGKMTPGQASLAKSWNTKRARETVALGREL 364
Query: 383 LGGNGILSDFLVAK 396
LGGNGIL DFLVAK
Sbjct: 365 LGGNGILVDFLVAK 378
>gi|194707498|gb|ACF87833.1| unknown [Zea mays]
gi|413944524|gb|AFW77173.1| glutaryl-CoA dehydrogenase isoform 1 [Zea mays]
gi|413944525|gb|AFW77174.1| glutaryl-CoA dehydrogenase isoform 2 [Zea mays]
Length = 433
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/375 (79%), Positives = 333/375 (88%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPALD+++AFPQATPAS FPP SDYYQFDDLLT EE+A+R KVR MEKEIAPIM EY
Sbjct: 17 GLPALDVTLAFPQATPASLFPPAVSDYYQFDDLLTDEEKALRKKVRGIMEKEIAPIMTEY 76
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPFH IP L +L +AGGTIKGYGCPG S+T +AI+IAE+ARVDASCSTFILVHSS
Sbjct: 77 WEKAEFPFHAIPSLASLGLAGGTIKGYGCPGLSLTASAISIAEVARVDASCSTFILVHSS 136
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM TIALCGSE QKQKYLPSL Q TI CWALTEP YGSDAS+L T ATKV GGW L+G
Sbjct: 137 LAMSTIALCGSEAQKQKYLPSLTQFKTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDG 196
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGNSTFADVL+I ARN TNQ+NG++VKK APGL TKIENKIGLR+VQNGDI+L
Sbjct: 197 QKRWIGNSTFADVLIILARNADTNQLNGFIVKKGAPGLKATKIENKIGLRMVQNGDIILN 256
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVP+EDRL G+NSFQD +KVLA+SR+MVAWQPIGISMGVYD+CHRYLKERKQFGAPLA
Sbjct: 257 KVFVPEEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGVYDICHRYLKERKQFGAPLA 316
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPG +SLGK+W + +ARE V+LGRE
Sbjct: 317 AFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGRSSLGKAWTSKKAREVVSLGRE 376
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL DFLVAK
Sbjct: 377 LLGGNGILVDFLVAK 391
>gi|226492968|ref|NP_001148492.1| glutaryl-CoA dehydrogenase [Zea mays]
gi|195619782|gb|ACG31721.1| glutaryl-CoA dehydrogenase [Zea mays]
Length = 433
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/374 (79%), Positives = 333/374 (89%)
Query: 23 LPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
LPALD+++AFPQATP+S FPP SDYYQFDDLLT EE+A+R KVR MEKEIAPIM EYW
Sbjct: 18 LPALDVTLAFPQATPSSLFPPAVSDYYQFDDLLTDEEKALRKKVRGIMEKEIAPIMTEYW 77
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
EKAEFPFH IP L +L +AGGTIKGYGCPG S+T +AI+IAE+ARVDASCSTFILVHSSL
Sbjct: 78 EKAEFPFHAIPSLASLGLAGGTIKGYGCPGLSLTASAISIAEVARVDASCSTFILVHSSL 137
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
AM TIALCGSE QKQKYLPSL Q TI CWALTEP YGSDAS+L T ATKV GGW L+GQ
Sbjct: 138 AMSTIALCGSEAQKQKYLPSLTQFKTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDGQ 197
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
KRWIGNSTFADVL+I ARN TNQ+NG++VKK APGL TKIENKIGLR+VQNGDI+L K
Sbjct: 198 KRWIGNSTFADVLIILARNADTNQLNGFIVKKGAPGLKATKIENKIGLRMVQNGDIILNK 257
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
VFVP+EDRL G+NSFQD +KVLA+SR+MVAWQPIGISMGVYD+CHRYLKERKQFGAPLAA
Sbjct: 258 VFVPEEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGVYDICHRYLKERKQFGAPLAA 317
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
FQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPG +SLGK+W + +ARE V+LGREL
Sbjct: 318 FQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGRSSLGKAWTSKKAREVVSLGREL 377
Query: 383 LGGNGILSDFLVAK 396
LGGNGIL DFLVAK
Sbjct: 378 LGGNGILVDFLVAK 391
>gi|302784406|ref|XP_002973975.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
gi|300158307|gb|EFJ24930.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
Length = 415
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/374 (78%), Positives = 334/374 (89%)
Query: 23 LPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
LPALD+S AFPQATPAS FPP SDY+Q DLL+ E+Q +RM+VR MEKE+APIMAEYW
Sbjct: 5 LPALDLSRAFPQATPASSFPPLVSDYFQLHDLLSKEDQDLRMRVRTVMEKEVAPIMAEYW 64
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
EKAEFPF ++PK+ +L++AGGTI+GYGCPG S+ G+AIA AE+ARVDASCSTFILVHSSL
Sbjct: 65 EKAEFPFEIVPKMASLKIAGGTIQGYGCPGLSILGSAIAAAEVARVDASCSTFILVHSSL 124
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
AMLTIA+CGSE+QKQKYLP LA+L+TIACWALTEP YGSDAS+L+TTATK +GGW+L GQ
Sbjct: 125 AMLTIAMCGSEQQKQKYLPQLAKLDTIACWALTEPDYGSDASSLSTTATKAKGGWVLNGQ 184
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
KRWIGNSTFADV VIFARNT TNQING++V+K PG TKIENKIGLRIVQNGDI+LK
Sbjct: 185 KRWIGNSTFADVAVIFARNTETNQINGFIVRKGTPGYRATKIENKIGLRIVQNGDIVLKD 244
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
F+PD+DRLPG+NSF DT+KVLA+SR+MVAWQPIG++MGVYDMCHRYL ERKQFGAPLA+
Sbjct: 245 AFIPDDDRLPGINSFADTNKVLAISRIMVAWQPIGVTMGVYDMCHRYLLERKQFGAPLAS 304
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
QINQ+KLVQMLGNIQAM LVGWRLCKLY+ G MTPG ASL K W T RARETVALGREL
Sbjct: 305 LQINQEKLVQMLGNIQAMALVGWRLCKLYDSGKMTPGQASLAKCWNTKRARETVALGREL 364
Query: 383 LGGNGILSDFLVAK 396
LGGNGIL DFLVAK
Sbjct: 365 LGGNGILVDFLVAK 378
>gi|357134502|ref|XP_003568856.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like
[Brachypodium distachyon]
Length = 437
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 294/383 (76%), Positives = 335/383 (87%)
Query: 14 KNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKE 73
+N LPAL++++AFPQATPAS FPP SDYYQFDDLL+ EE+ +R KVR EKE
Sbjct: 13 RNEDGGKVGLPALEVALAFPQATPASLFPPSVSDYYQFDDLLSDEEKTLRKKVRAISEKE 72
Query: 74 IAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCS 133
IAPIM EYWEKAEFPFH IPKL L +AG T KGYGCPG S+T +AI+IAE+ARVDASCS
Sbjct: 73 IAPIMTEYWEKAEFPFHAIPKLATLGLAGSTTKGYGCPGLSLTASAISIAEVARVDASCS 132
Query: 134 TFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV 193
TFILVHSSLAM TIALCGSE QKQKYLPS+AQL T+ CWALTEP YGSDAS+L T+ATKV
Sbjct: 133 TFILVHSSLAMSTIALCGSEAQKQKYLPSMAQLKTVGCWALTEPDYGSDASSLKTSATKV 192
Query: 194 EGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIV 253
GGW+L+GQKRWIGNSTFADVL+I ARN T Q+NG++VKK APGL TKI+NKIGLR+V
Sbjct: 193 PGGWLLDGQKRWIGNSTFADVLIILARNADTKQLNGFIVKKGAPGLKATKIQNKIGLRMV 252
Query: 254 QNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKER 313
QNGDILL KVFVP+EDRL G++SFQD SKVLA+SR+MVAWQPIGI+MGVYDMCHRYLKER
Sbjct: 253 QNGDILLNKVFVPEEDRLTGIDSFQDISKVLAMSRIMVAWQPIGIAMGVYDMCHRYLKER 312
Query: 314 KQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARAR 373
KQFGAPLAAFQ+NQ+KLV+MLGNIQAM+L+GWRLCKLYE MTPGHASLGK+W + +AR
Sbjct: 313 KQFGAPLAAFQLNQEKLVRMLGNIQAMVLIGWRLCKLYESDKMTPGHASLGKAWTSTKAR 372
Query: 374 ETVALGRELLGGNGILSDFLVAK 396
E V+LGRELLGGNGIL+DFLVAK
Sbjct: 373 EVVSLGRELLGGNGILADFLVAK 395
>gi|115462277|ref|NP_001054738.1| Os05g0163700 [Oryza sativa Japonica Group]
gi|46981342|gb|AAT07660.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
gi|113578289|dbj|BAF16652.1| Os05g0163700 [Oryza sativa Japonica Group]
gi|215701132|dbj|BAG92556.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630308|gb|EEE62440.1| hypothetical protein OsJ_17232 [Oryza sativa Japonica Group]
Length = 430
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/375 (78%), Positives = 331/375 (88%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPALD+++AFPQAT AS+FPP SDYYQFDDLLT EE+ +R KVR ME+EIAPIM EY
Sbjct: 14 GLPALDVALAFPQATTASQFPPAVSDYYQFDDLLTDEEKTLRKKVRGIMEREIAPIMTEY 73
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPFH IPKL L +AGGT KGYGCPG S+T +AI++AE+ARVDASCSTFILVHSS
Sbjct: 74 WEKAEFPFHAIPKLATLGLAGGTTKGYGCPGLSLTASAISVAEVARVDASCSTFILVHSS 133
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM TIALCGSE QKQKYLPSL Q TI CWALTEP YGSDAS+L T ATKV GGW L+G
Sbjct: 134 LAMSTIALCGSEAQKQKYLPSLTQFRTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDG 193
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGN TFADVL+I ARN+ TNQ+NG++VKK APGL TKIENKIGLR+VQN DI+L
Sbjct: 194 QKRWIGNGTFADVLIILARNSDTNQLNGFIVKKGAPGLKCTKIENKIGLRMVQNADIVLN 253
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVPDEDRL G+NSFQD +KVLA+SR+MVAWQPIGISMGV+DMCHRYLKERKQFG PLA
Sbjct: 254 KVFVPDEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLA 313
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPGHASLGK+W + +ARE V+LGRE
Sbjct: 314 AFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLGRE 373
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 374 LLGGNGILADFLVAK 388
>gi|218196154|gb|EEC78581.1| hypothetical protein OsI_18581 [Oryza sativa Indica Group]
Length = 430
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 294/375 (78%), Positives = 331/375 (88%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPALD+++AFPQAT AS+FPP SDYYQFDDLLT EE+ +R KVR ME+EIAPIM EY
Sbjct: 14 GLPALDVALAFPQATKASQFPPAVSDYYQFDDLLTDEEKTLRKKVRGIMEREIAPIMTEY 73
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPFH IPKL L +AGGT KGYGCPG S+T +AI++AE+ARVDASCSTFILVHSS
Sbjct: 74 WEKAEFPFHAIPKLATLGLAGGTTKGYGCPGLSLTASAISVAEVARVDASCSTFILVHSS 133
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM TIALCGSE QKQKYLPSL Q T+ CWALTEP YGSDAS+L T ATKV GGW L+G
Sbjct: 134 LAMSTIALCGSEAQKQKYLPSLTQFRTVGCWALTEPDYGSDASSLRTAATKVPGGWHLDG 193
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGN TFADVL+I ARN+ TNQ+NG++VKK APGL TKIENKIGLR+VQN DI+L
Sbjct: 194 QKRWIGNGTFADVLIILARNSDTNQLNGFIVKKGAPGLKCTKIENKIGLRMVQNADIVLN 253
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVPDEDRL G+NSFQD +KVLA+SR+MVAWQPIGISMGV+DMCHRYLKERKQFG PLA
Sbjct: 254 KVFVPDEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLA 313
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPGHASLGK+W + +ARE V+LGRE
Sbjct: 314 AFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLGRE 373
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 374 LLGGNGILADFLVAK 388
>gi|226508436|ref|NP_001150306.1| LOC100283936 [Zea mays]
gi|195638260|gb|ACG38598.1| glutaryl-CoA dehydrogenase [Zea mays]
Length = 436
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 293/375 (78%), Positives = 334/375 (89%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPA+D+S+AFPQATPAS FPP ASDYY DDLLTSEE+++RMKVR MEKEIAPIM+ Y
Sbjct: 20 GLPAMDLSLAFPQATPASIFPPSASDYYPSDDLLTSEERSIRMKVRGIMEKEIAPIMSAY 79
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPF+ IPKL +L VAGGTIKGYGCPG S+T +A+ ++EIARV ASCSTFILVHSS
Sbjct: 80 WEKAEFPFNAIPKLASLGVAGGTIKGYGCPGLSITASAVTMSEIARVYASCSTFILVHSS 139
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM+TIALCGSE QKQKYLPSLAQL T+ CWALTEP YGSDAS+L T ATK GGW ++G
Sbjct: 140 LAMVTIALCGSEAQKQKYLPSLAQLTTVGCWALTEPNYGSDASSLRTLATKAPGGWHIDG 199
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGNSTFADVLV+ ARN T Q+NG++V+K APGL TKIENKIGLR+VQNGDI+L
Sbjct: 200 QKRWIGNSTFADVLVVLARNADTQQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIVLN 259
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVPDEDRLPG+NSFQD SKVLA+SR+MVAWQP+GISMGV+DMCHRYLKERKQFG PLA
Sbjct: 260 KVFVPDEDRLPGINSFQDISKVLAISRIMVAWQPVGISMGVFDMCHRYLKERKQFGVPLA 319
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KL +MLGN+Q+M+LVGWRLCKLYE G MTPGHASLGK+W + ARE V+LGRE
Sbjct: 320 AFQLNQEKLARMLGNVQSMVLVGWRLCKLYESGKMTPGHASLGKAWNSRTAREVVSLGRE 379
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 380 LLGGNGILADFLVAK 394
>gi|116787122|gb|ABK24383.1| unknown [Picea sitchensis]
Length = 429
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 289/382 (75%), Positives = 340/382 (89%)
Query: 15 NARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEI 74
N R+S+ LPA+DIS+AFPQATPASKFPPC SDY+Q D LT EE+ +R KVRE E EI
Sbjct: 3 NDRTSHLGLPAMDISLAFPQATPASKFPPCVSDYFQLDAFLTPEERDIRKKVREVAETEI 62
Query: 75 APIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCST 134
API+ +YWE+AEFPF ++PKL L+V+GGTIKGYGCPG S G+A+A++E+ARVDASCST
Sbjct: 63 APIIVKYWERAEFPFEIVPKLATLKVSGGTIKGYGCPGLSTLGSALALSEVARVDASCST 122
Query: 135 FILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVE 194
F++VH+ LAMLTI++CGSE+QK KYLPSLAQL+TI+CWALTEP YGSDAS+LNT ATKVE
Sbjct: 123 FLMVHTCLAMLTISMCGSEDQKTKYLPSLAQLHTISCWALTEPNYGSDASSLNTIATKVE 182
Query: 195 GGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQ 254
GGW L+GQKRWIGNSTFAD+LV+FARN TTNQING++V+K PGL VTKIENKIGLR VQ
Sbjct: 183 GGWKLDGQKRWIGNSTFADILVVFARNITTNQINGFIVRKGTPGLRVTKIENKIGLRCVQ 242
Query: 255 NGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERK 314
NGDILLK VFV DEDRLPG++SFQDTSKVLAVSR+MV+WQPIGI+MGVYDMCHRYL+ERK
Sbjct: 243 NGDILLKGVFVADEDRLPGIDSFQDTSKVLAVSRIMVSWQPIGIAMGVYDMCHRYLQERK 302
Query: 315 QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARE 374
QFG L +FQI+Q+KL++MLGNIQAM L+GWRLCKLY+ G MTPGHASL K+W T +ARE
Sbjct: 303 QFGVSLNSFQISQEKLIRMLGNIQAMNLMGWRLCKLYDDGKMTPGHASLTKAWNTLKARE 362
Query: 375 TVALGRELLGGNGILSDFLVAK 396
V+LGRELLGGNGIL+DFLVAK
Sbjct: 363 VVSLGRELLGGNGILTDFLVAK 384
>gi|9757682|dbj|BAB08201.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 428
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/375 (78%), Positives = 328/375 (87%), Gaps = 5/375 (1%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPALDIS+AFPQATPAS FPP ASDYYQ DDLLT+EEQ++R VR MEKEIAPIMA Y
Sbjct: 17 GLPALDISLAFPQATPASIFPPSASDYYQIDDLLTTEEQSIRKNVRAIMEKEIAPIMATY 76
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPFH IPKL +L VAGGTIKGYGCPG S+T +AI +AEIARVDASCSTFILVHSS
Sbjct: 77 WEKAEFPFHAIPKLSSLGVAGGTIKGYGCPGLSITASAITMAEIARVDASCSTFILVHSS 136
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM+TIALCGSE QKQKYLPSLAQL + CWALTEP +GSDAS+L TTATKV GGW ++G
Sbjct: 137 LAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTATKVPGGWHIDG 196
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
QKRWIGNSTFADVLV+ ARN T Q+NG++V+K APGL TKIENKIGLR+VQNGDI+
Sbjct: 197 QKRWIGNSTFADVLVVLARNANTKQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIVFN 256
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
KVFVP+EDRLPGVNSFQD SKVLA+SRVMVAWQPIGISMGV+D+CH RKQFG PL
Sbjct: 257 KVFVPEEDRLPGVNSFQDISKVLAISRVMVAWQPIGISMGVFDVCH-----RKQFGVPLV 311
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
AFQ+NQ+KLV+MLGNIQAM+LVGWRLCKLYE G MTPGHASLGK W + ARE V+LGRE
Sbjct: 312 AFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKGWTSRMAREVVSLGRE 371
Query: 382 LLGGNGILSDFLVAK 396
LLGGNGIL+DFLVAK
Sbjct: 372 LLGGNGILADFLVAK 386
>gi|357129808|ref|XP_003566553.1| PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like
[Brachypodium distachyon]
Length = 438
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/376 (76%), Positives = 328/376 (87%), Gaps = 1/376 (0%)
Query: 22 NLPALDISVAFPQATPASK-FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAE 80
LPALD+++AFPQATPAS FPP SDYYQ DDLLT EE+A+R KVR EKEIAPIM E
Sbjct: 21 GLPALDVALAFPQATPASLLFPPAVSDYYQIDDLLTDEEKALRKKVRAISEKEIAPIMTE 80
Query: 81 YWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHS 140
YWEKAEFPFH IPKL L + G T+KGYGCPG S+T +A++IAE++RVDASCS FILVHS
Sbjct: 81 YWEKAEFPFHAIPKLATLGLVGSTMKGYGCPGLSLTASAVSIAEVSRVDASCSAFILVHS 140
Query: 141 SLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILE 200
SLAM TIALCGSE QKQKYLPS+AQL T+ CWALTEP YGSDAS+L T+ATKV GGW L+
Sbjct: 141 SLAMSTIALCGSEAQKQKYLPSMAQLKTVGCWALTEPDYGSDASSLKTSATKVPGGWHLD 200
Query: 201 GQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
GQKRWIGNSTFADVL+I ARN T Q+NG++VKK APGL TKI+NKIGLR+VQNGDILL
Sbjct: 201 GQKRWIGNSTFADVLIILARNADTKQLNGFIVKKGAPGLKATKIQNKIGLRMVQNGDILL 260
Query: 261 KKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPL 320
KVFVPDEDRL G++SFQD +KVL +SRVMV WQPIG++MGVYDMCHRYL ERKQFGAPL
Sbjct: 261 NKVFVPDEDRLTGIDSFQDINKVLGMSRVMVTWQPIGVAMGVYDMCHRYLGERKQFGAPL 320
Query: 321 AAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGR 380
AAFQ+NQ+KLV+MLG+IQAM+LVGWRLCKLYE G MTPGHASLGK+W + +ARE ++GR
Sbjct: 321 AAFQLNQEKLVRMLGDIQAMVLVGWRLCKLYESGKMTPGHASLGKAWTSTKAREVASVGR 380
Query: 381 ELLGGNGILSDFLVAK 396
ELLGGNGIL+DFLVAK
Sbjct: 381 ELLGGNGILADFLVAK 396
>gi|168038304|ref|XP_001771641.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677080|gb|EDQ63555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 280/374 (74%), Positives = 323/374 (86%)
Query: 23 LPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
LP LDI AFPQATPAS FP SDY+Q DDLL+SE+ A+R ++RE MEK +AP+M +YW
Sbjct: 55 LPPLDIRSAFPQATPASIFPESVSDYFQLDDLLSSEDVALRKRIRETMEKHVAPVMTKYW 114
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
EKAEFPF +P + +L VAGGT KGYGCPG SV +A+A++EIARVDASCSTF+LVHSSL
Sbjct: 115 EKAEFPFECVPHISSLMVAGGTTKGYGCPGLSVLSSALAMSEIARVDASCSTFVLVHSSL 174
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
M T+A+ GSEEQK KYLP LA+L+ I CWALTEP YGSDAS+LNTTA KVEGGW+L GQ
Sbjct: 175 CMATLAMLGSEEQKLKYLPGLARLDLIGCWALTEPGYGSDASSLNTTAKKVEGGWLLNGQ 234
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
KRWIGN+TFADV V+FARNT TNQING++VKK PG TKIENKIGLR+VQNGDI+++
Sbjct: 235 KRWIGNATFADVAVLFARNTQTNQINGFIVKKGTPGYRATKIENKIGLRMVQNGDIVMEN 294
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
FVPD+DRLPG+NSF DT+KVLAVSR+MVAWQPIGI+MGVYD+CHRYL ERKQFGAPLAA
Sbjct: 295 AFVPDKDRLPGINSFADTNKVLAVSRIMVAWQPIGIAMGVYDICHRYLLERKQFGAPLAA 354
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
QINQ+KLV+MLGNIQAM L+GWRLCK+YE G MTPG ASL K+W T RARETVALGREL
Sbjct: 355 LQINQEKLVRMLGNIQAMFLLGWRLCKIYEAGKMTPGQASLCKAWNTKRARETVALGREL 414
Query: 383 LGGNGILSDFLVAK 396
LGGNGIL+DFLVAK
Sbjct: 415 LGGNGILADFLVAK 428
>gi|168030249|ref|XP_001767636.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681165|gb|EDQ67595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/327 (76%), Positives = 288/327 (88%)
Query: 70 MEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVD 129
ME+ +AP++ +YWEKAEFPF +IP L +L++AGGTIKGYGCPG S+ A+ AEIARVD
Sbjct: 1 MEEHVAPVVTKYWEKAEFPFEIIPHLASLKIAGGTIKGYGCPGLSILSHALVGAEIARVD 60
Query: 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTT 189
ASC TF LVHSSL M TI + G+EEQKQKYLPSLA+ +TI CWALTEPAYGSDAS+LNTT
Sbjct: 61 ASCCTFALVHSSLCMSTIGMLGNEEQKQKYLPSLARFDTIGCWALTEPAYGSDASSLNTT 120
Query: 190 ATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIG 249
A KVEGGW+L GQKRWIGN+TFAD++V+FARNT TNQING++VKK PG TKIENKIG
Sbjct: 121 AVKVEGGWLLNGQKRWIGNATFADIVVVFARNTQTNQINGFIVKKGTPGYRATKIENKIG 180
Query: 250 LRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRY 309
LRIVQNGDI++K VF+PDEDRL G+NSFQDT+KVLAVSR+MVAW PIG+ MGVYD+C+RY
Sbjct: 181 LRIVQNGDIIMKDVFIPDEDRLTGINSFQDTNKVLAVSRIMVAWLPIGVCMGVYDICYRY 240
Query: 310 LKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWIT 369
L+ERKQFGAPLAA QINQ+KLV+MLGNIQAM L+GW+LCK+YE G MTPG ASL K+W T
Sbjct: 241 LQERKQFGAPLAALQINQEKLVRMLGNIQAMFLLGWKLCKMYESGKMTPGQASLCKAWNT 300
Query: 370 ARARETVALGRELLGGNGILSDFLVAK 396
RARETVALGRELLGGNGILSDFLVAK
Sbjct: 301 LRARETVALGRELLGGNGILSDFLVAK 327
>gi|242075034|ref|XP_002447453.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
gi|241938636|gb|EES11781.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
Length = 418
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/381 (63%), Positives = 294/381 (77%), Gaps = 10/381 (2%)
Query: 28 ISVAFPQATPA-SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAE------ 80
+SVA + TPA S FP SDYYQFD+LLT EE+ +R+ +R+ MEKE+API+ +
Sbjct: 2 MSVACARLTPAASVFPAAVSDYYQFDELLTPEEKNLRINIRQFMEKEVAPIVPKVVLHLV 61
Query: 81 ---YWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFIL 137
YWE A+FPFH+IPKLG+L GG IKG+GCPG S T A+ I+E+ARVDAS ++F L
Sbjct: 62 HWLYWETAQFPFHLIPKLGSLGFLGGIIKGHGCPGLSETAYAVCISEVARVDASIASFCL 121
Query: 138 VHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGW 197
V S LAML IA GSE QK+KYLP L++ + +ALTEP YGSDAS+LNT A KV GGW
Sbjct: 122 VQSCLAMLCIAQMGSEAQKEKYLPLLSKQQKVCAYALTEPDYGSDASSLNTVARKVPGGW 181
Query: 198 ILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGD 257
+L G+KRW GNS+FADVLV+ ARNT+TNQ+NG++V + GL + KIENK+ +R+VQN D
Sbjct: 182 VLNGRKRWPGNSSFADVLVVLARNTSTNQVNGFIVNGGSSGLKINKIENKVSMRMVQNCD 241
Query: 258 ILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFG 317
I L VFVPD+DRLPG NSFQD L+ SRVM AW IGI+ GVYD CHRYL ERKQFG
Sbjct: 242 IQLDDVFVPDDDRLPGANSFQDLVDSLSFSRVMAAWVSIGIAEGVYDACHRYLGERKQFG 301
Query: 318 APLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA 377
PLA FQ+NQ+KLV+MLGNIQAM L+GWRLCKL+ G +T GHASLGK+WIT +ARETVA
Sbjct: 302 VPLATFQLNQEKLVRMLGNIQAMWLLGWRLCKLHASGNITTGHASLGKAWITKQARETVA 361
Query: 378 LGRELLGGNGILSDFLVAKVI 398
LGRELLGGNGI++DF V K +
Sbjct: 362 LGRELLGGNGIVTDFHVGKAL 382
>gi|384247500|gb|EIE20986.1| acyl-CoA dehydrogenase NM domain-like protein [Coccomyxa
subellipsoidea C-169]
Length = 405
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/358 (61%), Positives = 282/358 (78%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
+ FPP A D + FDDLL++EE+ +R + R MEKE+API+A+YWE+A FPF ++P+L L
Sbjct: 2 ANFPPAAHDVFLFDDLLSTEEKDIRYRTRAFMEKEVAPIIADYWERAAFPFDLVPRLAKL 61
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G + GYGCPG SV GAA+A+ EIARVDAS STF++VH+SLAMLT+ L SEEQK++
Sbjct: 62 NLGGANLAGYGCPGQSVIGAAMAVIEIARVDASMSTFLMVHNSLAMLTLGLLASEEQKRE 121
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP +A L I W LTEP+ GSDA+AL TTA KV+GGW+L G+KRWIGN+TFADV+VI+
Sbjct: 122 LLPDMAALKLIGAWGLTEPSNGSDAAALQTTARKVDGGWVLNGRKRWIGNATFADVIVIW 181
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR++ T Q+N ++V+K A GL +KIENKI LR+VQN DI L FV D RLPGV SF+
Sbjct: 182 ARSSETQQVNAFIVRKGARGLRTSKIENKIALRVVQNADIFLDDCFVADSARLPGVTSFK 241
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVLA+SR+MVAWQP+GI+ GV+DMC RY+ ER+QFGA L +FQ+ Q+KL +ML N+Q
Sbjct: 242 DTNKVLAISRIMVAWQPVGIACGVFDMCKRYVDEREQFGAALGSFQLVQEKLARMLANLQ 301
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
AM L+ WRL KLYE+G MT AS K+W T R RE V+LGRELLGGNG+++DFLVAK
Sbjct: 302 AMFLMCWRLSKLYEEGKMTHELASTTKAWTTLRGREVVSLGRELLGGNGVVTDFLVAK 359
>gi|302834786|ref|XP_002948955.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
nagariensis]
gi|300265700|gb|EFJ49890.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
nagariensis]
Length = 425
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/363 (60%), Positives = 269/363 (74%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
QAT + FPP D + LL+ EE+ +R KVR ME +AP++A+YWE+AEFP ++P
Sbjct: 3 QATTMAAFPPAVHDLLALEGLLSPEERQLRDKVRSYMEANVAPVIADYWERAEFPHPLVP 62
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
AL +AGG IKGYGCPG S+ A+A+ EIARVDAS STF+LVHS LAMLTI L GSE
Sbjct: 63 GFAALGLAGGAIKGYGCPGLSILSNAMAVVEIARVDASMSTFLLVHSYLAMLTIGLLGSE 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQKQ+ LP +A+ + CWALTEP+ GSDASAL TATKV GGW++ G KRWIGN T+AD
Sbjct: 123 EQKQELLPRMAKFELVGCWALTEPSNGSDASALTATATKVPGGWMINGYKRWIGNGTWAD 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++ARN Q+N ++V+K PGL KIENKI LR VQN D+ + FVPD RLP
Sbjct: 183 VTVVWARNNQDGQVNAFIVRKGNPGLRTAKIENKIALRCVQNADMTFSQCFVPDSARLPE 242
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
V SF DT+KVLA+SR+MVAWQP+G+S+GVYDMC RY+ ERKQF L +FQ+ Q+KL +M
Sbjct: 243 VTSFADTNKVLAISRIMVAWQPVGLSVGVYDMCCRYVTERKQFNTQLGSFQLVQEKLARM 302
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
G+IQ M L WRL KLYE+G M+ ASL K+W +AR RE +ALGRELLGGNGIL FL
Sbjct: 303 GGHIQGMWLACWRLSKLYEEGRMSHEQASLVKAWTSARGREVMALGRELLGGNGILGHFL 362
Query: 394 VAK 396
VAK
Sbjct: 363 VAK 365
>gi|307105930|gb|EFN54177.1| hypothetical protein CHLNCDRAFT_24792 [Chlorella variabilis]
Length = 403
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/358 (60%), Positives = 274/358 (76%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FPP D ++LLT E+ VR +VR E EIAPI+++YWE+AEFPF ++P L +
Sbjct: 4 FPPAKHDALGLEELLTPAEREVRDRVRRFAESEIAPIISDYWERAEFPFPLVPGFQKLGI 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
GG ++GYGC G SV GAA+A E+ARVD SCSTF LVHS LA LT+ L GSE QKQ+ L
Sbjct: 64 GGGHLQGYGCQGLSVMGAAMAAVELARVDGSCSTFFLVHSFLATLTVGLLGSEAQKQELL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A + CWALTEP+ GSDASAL T A +V+GGW+L G+KRWIGN+T+AD+ VI+AR
Sbjct: 124 PEMADFRRVGCWALTEPSNGSDASALATVARRVQGGWVLNGRKRWIGNATWADIAVIWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
N+ T+Q+N ++V+K PG + TK+ENKI LR VQNGDI L FVPD DR+PGV+SF DT
Sbjct: 184 NSETSQVNAFIVRKGNPGYSATKMENKIALRCVQNGDIKLTDAFVPDADRIPGVSSFSDT 243
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+KVLA+SR+MVAWQP+G+++G YDMC RYL++R+QFGAPLA+FQ+ Q+KL +ML QAM
Sbjct: 244 NKVLAISRIMVAWQPVGLALGAYDMCARYLQQRRQFGAPLASFQLMQEKLQRMLSTCQAM 303
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
L+ WRL KLYE G +T ASL K+W T R RE VALGRELLGGNGILS+FLVAK
Sbjct: 304 WLMAWRLTKLYEAGKLTHEQASLVKAWTTLRGREVVALGRELLGGNGILSEFLVAKAF 361
>gi|238014854|gb|ACR38462.1| unknown [Zea mays]
Length = 257
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/238 (77%), Positives = 209/238 (87%)
Query: 22 NLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEY 81
LPA+DIS+AFPQATPAS FPP ASDYYQ DDLLTSEE+++RMKVR MEKEIAPIM+ Y
Sbjct: 20 GLPAMDISLAFPQATPASIFPPSASDYYQSDDLLTSEERSIRMKVRGIMEKEIAPIMSAY 79
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
WEKAEFPF+ IPKL +L VAGGTIKGYGCPG S+T +A+ ++EIARVDASCSTFILVHSS
Sbjct: 80 WEKAEFPFNAIPKLASLGVAGGTIKGYGCPGLSITASAVTMSEIARVDASCSTFILVHSS 139
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 201
LAM+TIALCGSE QKQKYLPSLAQL T+ CWALTEP YGSDAS+L T ATK GGW ++G
Sbjct: 140 LAMVTIALCGSEAQKQKYLPSLAQLTTVGCWALTEPNYGSDASSLRTIATKAPGGWHIDG 199
Query: 202 QKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDIL 259
QKRWIGNSTFADVLV+ ARN T Q+NG++V+K APGL TKIENKIGLR+VQNGDI+
Sbjct: 200 QKRWIGNSTFADVLVVLARNADTQQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIV 257
>gi|440792134|gb|ELR13362.1| acylCoA dehydrogenase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 434
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P A A PP SD+ F++LL EE+ R K R + +API+ +Y+EKAEFPF ++
Sbjct: 33 PTAGAAVAVPP--SDFLGFEELLGPEERQWRDKARAFAQNHVAPIIDKYYEKAEFPFELL 90
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
PKL L + GGTIKGYGCPG S AA+ + E+ARV++ + F ++ + L ML+I CGS
Sbjct: 91 PKLKELGIMGGTIKGYGCPGMSFMSAAMVVLELARVNSEFAGFFIIVTYLVMLSIEQCGS 150
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQKQK+LP LA + + + LTEP GSDAS L TTA KV GGW L GQKRWIGN+TFA
Sbjct: 151 EEQKQKWLPRLASADAVGSFGLTEPGAGSDASGLQTTAKKVAGGWRLNGQKRWIGNATFA 210
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV++I+ARN T ++NG+LV+K GL KIENK+ R VQN DI L+ VP+ R P
Sbjct: 211 DVIIIWARNEETGEVNGFLVEKGTKGLRTEKIENKMCFRCVQNADIYLEDCVVPESARFP 270
Query: 273 GVNSF-QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
+SF + T+ +L+ SR+ V W P+G++MG YD ++LKER+QFG+PLAAFQ+ Q+KLV
Sbjct: 271 NADSFLKGTAGILSASRIFVGWLPVGLAMGSYDAALKHLKERQQFGSPLAAFQLMQEKLV 330
Query: 332 QMLGNIQAMILVGWRLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
+ML N QAM L+ WRL +L+ K G +T G +SL K+ T + RE VAL RE+LGGNGI+
Sbjct: 331 RMLANAQAMYLMSWRLSELFVKHGQVTRGQSSLVKAHNTLKGRECVALAREVLGGNGIIY 390
Query: 391 DFLVAK 396
D +VA+
Sbjct: 391 DNVVAR 396
>gi|440803651|gb|ELR24535.1| acylCoA dehydrogenase domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 372
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/353 (52%), Positives = 252/353 (71%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD+ F++LL EE+ R K R + +API+ +Y+EKAEFPF ++PKL L + GGTI
Sbjct: 1 SDFLGFEELLGPEERQWRDKARAFAQNHVAPIIDKYYEKAEFPFELLPKLKELGIMGGTI 60
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGCPG S AA+ + E+ARV++ + F ++ + L ML+I CGSEEQKQK+LP LA
Sbjct: 61 KGYGCPGMSFMSAAMVVLELARVNSEFAGFFIIVTYLVMLSIEQCGSEEQKQKWLPRLAS 120
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
++ + + LTEP GSDAS L TTA KV GGW L GQKRWIGN+TFADV++I+ARN T
Sbjct: 121 VDAVGSFGLTEPGAGSDASGLQTTAKKVAGGWRLNGQKRWIGNATFADVIIIWARNEETG 180
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF-QDTSKVL 284
++NG+LV+K GL KIENK+ R VQN DI L+ VP+ R P +SF + T+ +L
Sbjct: 181 EVNGFLVEKGTKGLRTEKIENKMCFRCVQNADIYLEDCVVPESARFPNADSFLKGTAGIL 240
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+ SR+ V W P+G++MG YD ++LKER+QFG+PLAAFQ+ Q+KLV+ML N QAM L+
Sbjct: 241 SASRIFVGWLPVGLAMGSYDAALKHLKERQQFGSPLAAFQLMQEKLVRMLANAQAMYLMS 300
Query: 345 WRLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
WRL +L+ K G +T G +SL K+ T + RE VAL RE+LGGNGI+ D +VA+
Sbjct: 301 WRLSELFVKHGQVTRGQSSLVKAHNTLKGRECVALAREVLGGNGIIYDNVVAR 353
>gi|163849086|ref|YP_001637130.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|222527059|ref|YP_002571530.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163670375|gb|ABY36741.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
J-10-fl]
gi|222450938|gb|ACM55204.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
Length = 394
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 247/352 (70%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + FD+LLT E+A+R KVR + + PI+ +YWE+AEFPF +IP++ L + GGTI+
Sbjct: 10 DLFHFDELLTPRERALRDKVRAFCNEHVLPIINDYWERAEFPFELIPRIAELGIVGGTIQ 69
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S + AE+AR D S TF+ V S LAM IA CGSEEQKQ++LP++A+L
Sbjct: 70 GYGCPGFSSVEVGLIAAELARGDGSVGTFVGVTSGLAMGAIAACGSEEQKQRWLPAMARL 129
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I +ALTEP GSDA+ + TTA +V GG++L G KRWIGN+TFADV+V++A++ T +
Sbjct: 130 EKIGAFALTEPYVGSDAAHIRTTAKRVSGGYLLNGAKRWIGNATFADVIVVWAQDEETGR 189
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+LV+K PG TKIE KI R V N DI L+ VFVP+E+RLP SF+DT+ +L
Sbjct: 190 IGGFLVEKGTPGYRATKIEGKIAKRSVINADITLENVFVPEENRLPLARSFRDTANILKN 249
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R VAW+ +G + Y++ Y +R+QFG P+A FQ+ QQKLV MLG++ A+ L+ WR
Sbjct: 250 TRYGVAWEAVGHAQAAYELALEYTLQREQFGRPIAGFQLVQQKLVHMLGDLTAIQLMAWR 309
Query: 347 LCKLY--EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L KL ++ +T G ASL K + A+AR+ VALGRE+LGGNGIL D +A+
Sbjct: 310 LSKLRDEDESQITEGMASLAKQYCAAKARQIVALGREVLGGNGILLDRHIAR 361
>gi|219847033|ref|YP_002461466.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
aggregans DSM 9485]
gi|219541292|gb|ACL23030.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
9485]
Length = 394
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/352 (50%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + FDDLLT E+A+R KVR + + PI+ +YWE+AEFPF +I ++ L + GGTI+
Sbjct: 10 DIFHFDDLLTPRERALRDKVRAFCNEHVLPIINDYWERAEFPFELISRIAELGIVGGTIQ 69
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + + AE+AR D S TF+ V S LAM IA CGSEEQKQ++LP++A+L
Sbjct: 70 GYGCPGFTSVEVGLIAAELARGDGSVGTFVGVTSGLAMGAIAACGSEEQKQRWLPAMARL 129
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I +ALTEP GSDA+ + TTA +V+GG++L G+KRWIGN+TFADV+V++A++ T +
Sbjct: 130 EKIGAFALTEPYVGSDAAHIRTTAKRVDGGYLLNGEKRWIGNATFADVIVVWAKDEETGR 189
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+LV+K PG TKIE KI R V N DI L VFVP+ +RLP SF+DT+ +L
Sbjct: 190 IGGFLVEKGTPGYQATKIEGKIAKRSVINADIKLNNVFVPEANRLPLARSFRDTANILKN 249
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R VAW+ +G + Y++ Y +R+QFG P+A FQ+ QQKLVQMLG++ A+ L+ WR
Sbjct: 250 TRYGVAWEAVGHAQAAYELALDYTLQREQFGRPIAGFQLVQQKLVQMLGDLTAIQLMAWR 309
Query: 347 LCKLY--EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L KL ++ +T G ASL K + +AR+ VALGRE+LGGNGIL D +A+
Sbjct: 310 LSKLRDEDENQITEGMASLAKQYCAGKARQIVALGREVLGGNGILLDRHIAR 361
>gi|159899987|ref|YP_001546234.1| acyl-CoA dehydrogenase [Herpetosiphon aurantiacus DSM 785]
gi|159893026|gb|ABX06106.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
DSM 785]
Length = 395
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 243/353 (68%), Gaps = 2/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A D+YQFD LLT EE+ VR +VR M++E+ PI+ EYWEK EFPF +IPKL L+V GGT
Sbjct: 11 ALDFYQFDLLLTPEEREVRDRVRGFMQREVKPIINEYWEKGEFPFELIPKLAELKVCGGT 70
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGCPG S + AE+A++D S TF V S LAM +I CGSE QK+ +LP LA
Sbjct: 71 IQGYGCPGLSSVATGLVAAEMAKIDGSVCTFFGVTSGLAMSSIYYCGSEAQKEYWLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTT 223
+ I +ALTEP GSDAS + TTA ++EG ++L GQKRWIGN++FADV++++AR+
Sbjct: 131 SMEKIGAFALTEPDNGSDASHIQTTA-RLEGDHYVLNGQKRWIGNASFADVIIVWARDEA 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
TNQ+ G+LV+K PG T + KI R + N +I L+ +P +RL SF+DT+ V
Sbjct: 190 TNQVTGFLVEKGTPGFEATVMHGKIAKRALWNAEIKLENCRIPASNRLEKARSFKDTAVV 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
LA +R VAW+ +G + Y+M RY +ERKQFG P+A +Q+ Q+KLV+ML + AM L
Sbjct: 250 LANTRFGVAWEGVGHAQAAYEMALRYSQERKQFGKPIAGYQLIQEKLVKMLAEVVAMELT 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
WRL L ++G MT G +SL K +A+AR+ VALGRE+ GGNG+L + +A+
Sbjct: 310 TWRLSVLRDQGLMTDGQSSLAKMNNSAKARQIVALGREIFGGNGLLLENHIAR 362
>gi|409098046|ref|ZP_11218070.1| glutaryl-CoA dehydrogenase [Pedobacter agri PB92]
Length = 453
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 240/361 (66%), Gaps = 2/361 (0%)
Query: 40 KFPPCASDYYQF-DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
+ PP D+YQ D+ L E++ +++KVR +EKE+ PI+ YW +AEFPF +IPKL L
Sbjct: 62 ELPPIDGDFYQLGDEALNDEDRELQLKVRAFLEKEVKPIVNHYWNRAEFPFEIIPKLAEL 121
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G T KGYGCPG S I E+AR+D S STF V S LAM +I LCGSE QKQ+
Sbjct: 122 NICGLTYKGYGCPGKSNLMEGILAMEMARIDTSISTFFGVQSGLAMGSIYLCGSEAQKQQ 181
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+LP + + I + LTEP GS A+ L TT V G WIL GQK+WIGN+TFAD+LVI
Sbjct: 182 WLPLMQKFQVIGAFGLTEPEVGSAAAGGLTTTCKNVNGKWILNGQKKWIGNATFADILVI 241
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ ++ G++VKKD PG V K+++K+ LRIVQNG I L V + DRL NSF
Sbjct: 242 WARDEGDGEVKGFIVKKDNPGFAVEKMQDKMALRIVQNGIITLTDCEVEEADRLQNANSF 301
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+KVL ++R VAWQ +G + G Y+ Y + RKQFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 KDTAKVLQMTRAGVAWQAVGCARGAYENALDYTRTRKQFGKPIASFQLIQNHLVEMLSNL 361
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
AM + +RL +L ++G + HASL K + + R R+ V+ RE++GGNGIL ++ VA+
Sbjct: 362 TAMQTLCFRLSQLQDQGLLKDEHASLAKVFCSLRTRDVVSKAREVMGGNGILLEYNVARF 421
Query: 398 I 398
+
Sbjct: 422 V 422
>gi|312129973|ref|YP_003997313.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906519|gb|ADQ16960.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 452
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 244/359 (67%), Gaps = 1/359 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P D+Y+ D LT+E++A+++KVRE ME E+API+ EYW + EFPF +IPK+G L +
Sbjct: 63 LPEPNPDFYELSDKLTAEQRALQLKVREFMETEVAPIVNEYWLRDEFPFELIPKMGDLGL 122
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
AG T +GYGCP + E+ARVDAS +TF V S L+M +I LCGSEEQKQ++L
Sbjct: 123 AGVTFEGYGCPNLPYMMEGVLAMEMARVDASIATFFGVQSGLSMGSIYLCGSEEQKQEWL 182
Query: 161 PSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P + ++ I + LTEP GS A+ L TT + GW+L GQK+WIGN+TFADV++I+A
Sbjct: 183 PKMNRMEKIGAFGLTEPEVGSGAAGGLTTTCKQTADGWVLNGQKKWIGNATFADVIIIWA 242
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ + ++ G+LV+K+ PG+ V KI+ K+ LRIVQNG I LK V ++DRLP NSF+D
Sbjct: 243 RDVDSGEVKGFLVRKENPGVHVEKIKGKMALRIVQNGLITLKDCIVEEKDRLPHANSFKD 302
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T+ VL ++R VAW +G + G Y+ Y K RKQFG P+A+FQ+ Q LV+M+ N+ A
Sbjct: 303 TANVLRMTRAGVAWMAVGCARGAYENALEYTKTRKQFGKPIASFQLIQNHLVEMISNLTA 362
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
M + +RL +L ++ + HASL K + T R R+ V RE++GGNGIL D+ VA+ +
Sbjct: 363 MQTLVYRLSELQDEDKLKDEHASLAKVFCTLRTRDIVRGAREVMGGNGILLDYNVARFV 421
>gi|345867818|ref|ZP_08819819.1| acyl-coenzyme A oxidase 4, peroxisomal [Bizionia argentinensis
JUB59]
gi|344047740|gb|EGV43363.1| acyl-coenzyme A oxidase 4, peroxisomal [Bizionia argentinensis
JUB59]
Length = 453
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 235/360 (65%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
K PP D+Y +D LT E++ +++KVR ME EI PI YW KAEFP +IPKL AL
Sbjct: 63 KLPPIDGDFYDYDLKLTQEQREIQLKVRSFMETEIQPIANHYWNKAEFPMDIIPKLAALN 122
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T GYGCP I E+ARVD S STF VHS LAM +I LCGSEEQKQ++
Sbjct: 123 ICGVTYDGYGCPNMPFLMEGIIAEELARVDVSISTFFGVHSGLAMGSIYLCGSEEQKQEW 182
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + ++ I + LTEP GS A + TT KV W+L GQK+WIGN+TFADV++I+
Sbjct: 183 LPKMQKMEAIGAFGLTEPNVGSGVAGGMETTCEKVGDEWVLNGQKKWIGNATFADVIIIW 242
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ NQ G+L++K P KIENK+ LR VQN I L +P+ DRL NSF+
Sbjct: 243 ARDIEDNQAKGFLLRKGNPDYKAEKIENKMALRTVQNALITLTDCKIPESDRLQKANSFK 302
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A FQ+ Q LV+ML N+
Sbjct: 303 DTAKVLRMTRAGVAWQALGCARGAYESALKYTKKREQFGKPIAKFQLIQNHLVEMLANLT 362
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L ++G +T HASL K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 363 AMKAMVYRLSELQDQGLLTDEHASLAKVFCSMRTRDVVSRAREVMGGNGILLEYDVARFV 422
>gi|431796120|ref|YP_007223024.1| acyl-CoA dehydrogenase [Echinicola vietnamensis DSM 17526]
gi|430786885|gb|AGA77014.1| acyl-CoA dehydrogenase [Echinicola vietnamensis DSM 17526]
Length = 452
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 230/360 (63%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y + L EQ + KVR+ MEKE+ PI EYW K FP H+IPK+ L
Sbjct: 62 ELPPVNGDFYSLEKTLPPHEQEIVAKVRDFMEKEVRPIANEYWNKGHFPMHIIPKMAELG 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG T KGYGCPGHS E+ARVD S STF V S LAM +I +CGSEEQKQ++
Sbjct: 122 IAGLTYKGYGCPGHSALLEGFLAMEMARVDTSISTFFGVQSGLAMGSIYVCGSEEQKQEW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIF 218
LP + +++ I + LTEP GS + TT K EG W++ GQK+WIGN+TF+D+ VI+
Sbjct: 182 LPKMQKMDVIGAFGLTEPKVGSGVAGGLTTTCKREGDEWVINGQKKWIGNATFSDITVIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ Q+ G++V+KD PG KIENK+ LR VQN I +K VP+ DRL NSF+
Sbjct: 242 ARDLDDQQVKGFIVRKDNPGFHPEKIENKMALRTVQNALITMKDCRVPESDRLQNANSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DTS++L ++R VAWQ +G G Y+ RY ERKQFG P+A FQ+ Q LV MLG++
Sbjct: 302 DTSEILRLTRAGVAWQAVGCGRGAYEAALRYTNERKQFGRPIAGFQLVQDLLVTMLGDLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL K+ + G + HASL K + T R R V REL GGNGIL ++ +A+ +
Sbjct: 362 AMQTMVYRLSKMQDAGELKDEHASLAKVFCTLRMRTIVDHSRELFGGNGILLEYDIARFV 421
>gi|227536311|ref|ZP_03966360.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243918|gb|EEI93933.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
Length = 449
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 239/360 (66%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y D L E++A+++KVR ME EI PI+ YW + EFPF +IPK AL
Sbjct: 59 ELPPINGDFYDIDAKLGPEDRALQLKVRSFMETEIKPIVNNYWLRDEFPFEIIPKFAALN 118
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG T +GYGC G + + AEIARVDAS +TF V S LAM +I +CGSEEQKQ++
Sbjct: 119 IAGYTYEGYGCAGGTSLMEGVVAAEIARVDASIATFFGVQSGLAMGSIYICGSEEQKQEW 178
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + ++ I + LTEP GS A+ L TT K E GW+L GQK+WIGNSTF+D+ +++
Sbjct: 179 LPKMQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQGWVLNGQKKWIGNSTFSDITIVW 238
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ ++ G++++KD PG V KI+ K+ LRIVQNG I + V + DRL NSF+
Sbjct: 239 ARDLDDGEVKGFIIRKDTPGFEVEKIKGKMALRIVQNGLITMTNCVVAESDRLQNANSFK 298
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAW +G + G Y+ Y ++RKQFG P+AAFQ+ Q LV+ML N+
Sbjct: 299 DTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQFGKPIAAFQLIQNHLVEMLSNLT 358
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L + G + HASL K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 359 AMQTLVFRLSELQDAGQLKDEHASLAKVFCSLRTRDIVSKAREVMGGNGILLEYNVARFL 418
>gi|374595237|ref|ZP_09668241.1| acyl-CoA dehydrogenase domain-containing protein [Gillisia limnaea
DSM 15749]
gi|373869876|gb|EHQ01874.1| acyl-CoA dehydrogenase domain-containing protein [Gillisia limnaea
DSM 15749]
Length = 454
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 242/361 (67%), Gaps = 1/361 (0%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S PP D+Y D LT E++ +++KVR ME E+ P++ ++W +A+FPF +I K L
Sbjct: 62 SDLPPIDGDFYNLDLKLTPEQREIQLKVRNFMEDEVKPLVNDHWNRAKFPFEIIEKFAKL 121
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
VAG +GYGCP HS I EIARVD S STF VHS LAM +I LCGSE QKQ+
Sbjct: 122 NVAGVPYEGYGCPNHSFLMEGIIAQEIARVDVSISTFFGVHSGLAMGSIYLCGSEAQKQE 181
Query: 159 YLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+LP++ +L I + LTEP GS A + TT + W+L GQK+WIGN+TFADV++I
Sbjct: 182 WLPAMQKLEKIGAFGLTEPNVGSGVAGGMETTCSFDGENWVLNGQKKWIGNATFADVIII 241
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ TN++ G++V+K+ PG K+E+K+ LRIVQN I L +P+ DRL NSF
Sbjct: 242 WARDEDTNRVKGFIVRKENPGFKAEKMEDKMALRIVQNALITLTNCKIPENDRLKHANSF 301
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 KDTAKVLRMTRAGVAWQAVGCARGAYESALKYTKKREQFGRPIASFQLIQDHLVEMLSNL 361
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
AM + +RL ++ ++G +T HASL K + + R R+ V+ RE+LGGNGIL ++ VA+
Sbjct: 362 TAMQTLVFRLSEMQDQGILTDEHASLAKVFCSMRTRDVVSRAREVLGGNGILLEYDVARF 421
Query: 398 I 398
+
Sbjct: 422 V 422
>gi|300772347|ref|ZP_07082217.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33861]
gi|300760650|gb|EFK57476.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33861]
Length = 450
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 240/360 (66%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y D L+ E++A+++KVR ME EI PI+ YW + EFPF +IPK AL
Sbjct: 60 ELPPINGDFYDIDAKLSPEDRALQLKVRSFMETEIKPIVNNYWLRDEFPFEIIPKFAALN 119
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG T +GYGC G + + AEIARVDAS +TF V S LAM +I +CGS+EQKQ++
Sbjct: 120 IAGYTYEGYGCAGGTSLMEGVVAAEIARVDASIATFFGVQSGLAMGSIYICGSDEQKQEW 179
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + ++ I + LTEP GS A+ L TT K E GW+L GQK+WIGNSTF+D+ +++
Sbjct: 180 LPKMQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQGWVLNGQKKWIGNSTFSDITIVW 239
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ ++ G++V+K+ PG V KI+ K+ LRIVQNG I + V + DRL NSF+
Sbjct: 240 ARDLDDGEVKGFIVRKETPGFEVEKIKGKMALRIVQNGLITMTNCVVAESDRLQNANSFK 299
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAW +G + G Y+ Y ++RKQFG P+AAFQ+ Q LV+ML N+
Sbjct: 300 DTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQFGKPIAAFQLIQNHLVEMLSNLT 359
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L + G + HASL K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 360 AMQTLVFRLSELQDAGQLKDEHASLAKVFCSLRTRDIVSKAREVMGGNGILLEYNVARFL 419
>gi|326800396|ref|YP_004318215.1| glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
gi|326551160|gb|ADZ79545.1| Glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
Length = 452
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 243/360 (67%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y+ D L++E++A+++++R+ ME+E+ P++ +YW EFPF +IPK G L
Sbjct: 62 ELPPINGDFYELSDRLSAEDRALQLRIRQFMEQEVKPLVNKYWLHDEFPFELIPKFGELG 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG T GYGCP S + E+ARVDAS +TF V S LAM +I LCGSEEQK+++
Sbjct: 122 LAGITYNGYGCPNKSFLMEGVLAMEMARVDASIATFFGVQSGLAMGSIYLCGSEEQKREW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + ++ I + LTEP GS A+ L TT + GW+L GQK+WIGN+TFAD++VI+
Sbjct: 182 LPQMNKMQKIGAFGLTEPEVGSGAAGGLTTTCKRTAEGWVLNGQKKWIGNATFADLIVIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ Q+ G+++KKD PG +V KI+ K+ LRIVQNG I LK V ++DRLP NSF+
Sbjct: 242 ARDLDDGQVKGFILKKDTPGFSVEKIKGKMALRIVQNGLITLKDCVVEEKDRLPHANSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+ VL ++R VAW +G + G Y+ Y ++RKQFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 DTANVLRMTRAGVAWMAVGCARGAYESALDYTRKRKQFGKPIASFQLIQNHLVEMLSNLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L + G + HASL K + + R R+ V RE++GGNGIL + VA+ +
Sbjct: 362 AMQTLVFRLSELQDAGQLKDEHASLAKVFCSLRTRDIVGQAREVMGGNGILLEHDVARFV 421
>gi|328876781|gb|EGG25144.1| putative acyl-CoA oxidase [Dictyostelium fasciculatum]
Length = 433
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 238/351 (67%), Gaps = 1/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DYY +DLL +E+ +R + ++ E +I PI +Y+EKAEFPF +IP L L+ AGG IK
Sbjct: 50 DYYGLNDLLNDKERLIRKQAKQFAESKILPIANKYYEKAEFPFELIPLLKQLKWAGGNIK 109
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GY CPG + T + E A+V A +TF + +++ML I CGSE QK KYLP +A +
Sbjct: 110 GYQCPGMTATELGMIAMEFAKVSADIATFYSILQTISMLPIYYCGSELQKLKYLPKMAAM 169
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
++I C+ LTEP GSDAS L A KV+ GWIL G+KRWIGN+ FAD+++++AR+T + +
Sbjct: 170 DSIGCFGLTEPLAGSDASGLLCEARKVDNGWILNGEKRWIGNAPFADIIIVWARDTESKK 229
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD-TSKVLA 285
I G++V+K PGL V I NKI LR+VQNG I K+ + D+ RLP N F K L
Sbjct: 230 IKGFIVEKGTPGLNVETINNKISLRMVQNGHIYFKECLISDDQRLPNANDFNSGPGKCLF 289
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
++R+M AW +G++ Y+ C +Y++ RKQFG PL+ FQ+ Q++LV+MLGN+QAM L+
Sbjct: 290 LTRIMAAWISLGVAANAYESCFKYVQSRKQFGTPLSKFQLIQERLVKMLGNLQAMTLMCL 349
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ L+++ ++ G L K++ T+ RE V+L RE +GGNGI++D+ VA+
Sbjct: 350 RVSHLFDQQKLSYGQIGLLKAYCTSHGREIVSLARECVGGNGIVTDYGVAR 400
>gi|86141033|ref|ZP_01059592.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85832975|gb|EAQ51424.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 454
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 236/360 (65%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
K PP D+Y LT EE+ ++MK+R ME E+ PI ++W +AEFP +IPK L
Sbjct: 63 KLPPIDGDFYNLAQKLTPEEREIQMKMRNFMEDEVKPIANDFWNRAEFPHEIIPKFAELN 122
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG KGYGCPG S I E+ARVD S STF VHS LAM +I LCGSEEQKQ++
Sbjct: 123 LAGIAYKGYGCPGQSFLLEGILAMELARVDVSISTFFGVHSGLAMGSIYLCGSEEQKQEW 182
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + + I + LTEP GS A+ L T+ KV WIL G+K+WIGN+TF+D+ +I+
Sbjct: 183 LPKMQKFEKIGAFGLTEPEVGSGAAGGLGTSCKKVGDEWILNGEKKWIGNATFSDITIIW 242
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ + + G++V+K+ PG K+++K+ LR VQN I L VP+ DRL NSF+
Sbjct: 243 ARDEDSGSVKGFIVRKENPGFHAEKMKDKMALRTVQNALITLTDCRVPESDRLQNANSFK 302
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A+FQ+ Q LV+M+ N+
Sbjct: 303 DTAKVLQMTRASVAWQAVGCARGAYEAALKYTKKREQFGRPIASFQLIQNHLVEMISNLT 362
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL ++ + G +T HASL K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 363 AMQTLCFRLSEMQDGGQLTDEHASLAKVFCSMRTRDVVSRAREVMGGNGILLEYDVARFV 422
>gi|255531117|ref|YP_003091489.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255344101|gb|ACU03427.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
2366]
Length = 453
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 241/361 (66%), Gaps = 2/361 (0%)
Query: 40 KFPPCASDYYQF-DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
+ PP D+YQ ++ L E++A+++KVR +EKE+ P++ +YW KAEFPF +IPK+ L
Sbjct: 62 ELPPIEGDFYQLGEEALKDEDRALQLKVRAFLEKEVKPVVNKYWLKAEFPFELIPKIAEL 121
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G T +GYGCPG S + E+ARVD S STF V S LAM I L GSE QKQ+
Sbjct: 122 NICGLTYQGYGCPGKSNLMEGMLAMEMARVDTSMSTFFGVQSGLAMGAIYLLGSEAQKQQ 181
Query: 159 YLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+LP + Q+ I + LTEP GS A L TTA + W+L GQK+WIGN+TF+D+ VI
Sbjct: 182 WLPDMQQMKIIGAFGLTEPEVGSGVAGGLTTTAKRQGNKWLLNGQKKWIGNATFSDITVI 241
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ NQ+ G+LV+K + G V K+++K+ LRIVQNG I L V +EDRL NSF
Sbjct: 242 WARDVDDNQVKGFLVRKGSKGFAVEKMQDKMALRIVQNGLITLTNCEVDEEDRLQNANSF 301
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+KVL ++R VAWQ +G + G Y+ Y + RKQFG P+A++Q+ Q LV+ML N+
Sbjct: 302 KDTAKVLKMTRAGVAWQAVGCARGAYESALNYTRTRKQFGKPIASYQLIQNHLVEMLSNL 361
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
AM + +RL +L ++G +T HASL K + + R R+ V+ RE++GGNGIL ++ VA+
Sbjct: 362 TAMQTLCFRLSQLQDQGLLTDEHASLAKVFCSMRTRDVVSRAREVMGGNGILLEYDVARF 421
Query: 398 I 398
+
Sbjct: 422 V 422
>gi|365876254|ref|ZP_09415776.1| acyl-CoA dehydrogenase [Elizabethkingia anophelis Ag1]
gi|442589559|ref|ZP_21008366.1| glutaryl-CoA dehydrogenase [Elizabethkingia anophelis R26]
gi|365755866|gb|EHM97783.1| acyl-CoA dehydrogenase [Elizabethkingia anophelis Ag1]
gi|442560447|gb|ELR77675.1| glutaryl-CoA dehydrogenase [Elizabethkingia anophelis R26]
Length = 452
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 239/366 (65%), Gaps = 1/366 (0%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
Q P + PP D+Y LT E++ V++KVR MEKE+ P++ YW EFPF +IP
Sbjct: 56 QDRPKKELPPIDGDFYDIYHTLTPEQREVQLKVRAFMEKEVKPLVNNYWLHDEFPFELIP 115
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
K L + G T +GYGCPG + E+AR+DAS +TF V S LAM +I +CGSE
Sbjct: 116 KFKELNICGVTYEGYGCPGMPFLMEGVIAMEMARIDASIATFFGVQSGLAMGSIYICGSE 175
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFA 212
EQKQK+LP + + + I + LTEP GS A+ L T + GW+L G+K+WIGN+TFA
Sbjct: 176 EQKQKWLPQMQKFDKIGAFGLTEPEVGSGAAGGLTATCKRTVEGWVLNGEKKWIGNATFA 235
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
D+++I+AR+ ++ G++V+KD PG +V KI+ K+ LRIVQNG I LK V +E+RL
Sbjct: 236 DLIIIWARDLDDGEVKGFIVEKDNPGFSVEKIKGKMALRIVQNGHITLKDCLVTEENRLQ 295
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
NSF+DT+KVL ++R VAW G + G Y+ Y ++RKQFG P+A+FQ+ Q LV+
Sbjct: 296 NANSFKDTAKVLRMTRAGVAWMATGCARGAYESALDYTRKRKQFGKPIASFQMIQGHLVE 355
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
ML N+ AM + +RL ++ ++G + HASL K + T R R+ V+ RE++GGNGIL ++
Sbjct: 356 MLSNLTAMQTLVFRLSEMQDEGILKDEHASLAKVFCTMRTRDIVSRAREVMGGNGILLEY 415
Query: 393 LVAKVI 398
VA+ +
Sbjct: 416 DVARFV 421
>gi|325104736|ref|YP_004274390.1| glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
gi|324973584|gb|ADY52568.1| Glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
Length = 452
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 236/360 (65%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP +D+Y L+ E++ ++MKVR+ ME E+ PI+ YW +AEFPF +IPK+ L
Sbjct: 62 ELPPIDADFYDLSGKLSPEDRELQMKVRQFMETEVKPIVNRYWNRAEFPFDIIPKVAELN 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T +GYGCP S I +E+ R+DAS +TF V S LAM +I +CGSEEQKQK+
Sbjct: 122 ICGITFEGYGCPNRSFLMEGIIASEMGRIDASIATFFGVQSGLAMGSIYVCGSEEQKQKW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIF 218
LP + +L I + LTEP GS A+ T K EG WIL GQK+WIGN+TFADV +I+
Sbjct: 182 LPRMQKLELIGSFGLTEPEVGSAAAGGLTVTAKREGNKWILNGQKKWIGNATFADVNIIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ NQ+ G++V+K G KIENK+ LRIVQNG I L V +E+RL NSF+
Sbjct: 242 ARDLDDNQVKGFIVEKGNSGFKADKIENKMALRIVQNGLITLTNCEVTEENRLQNCNSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
D +KVL ++R VAW +G + G Y+ +Y +ER QFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 DVAKVLRMTRAGVAWMAVGCARGAYESALKYTRERIQFGRPIASFQLIQNHLVEMLSNLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L + +T HASL K + T R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 362 AMQTLVYRLSELQDNNQLTDEHASLAKVFCTLRMRDVVSRAREVMGGNGILLEYDVARFV 421
>gi|390954125|ref|YP_006417883.1| acyl-CoA dehydrogenase [Aequorivita sublithincola DSM 14238]
gi|390420111|gb|AFL80868.1| acyl-CoA dehydrogenase [Aequorivita sublithincola DSM 14238]
Length = 454
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 237/360 (65%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
K PP D+Y L+ +++ +++KVR ME EI PI EYW KAEFPF +IPK+ L
Sbjct: 64 KLPPIDGDFYDMALKLSPQQRELQIKVRNFMEDEIKPIANEYWNKAEFPFQIIPKMAELN 123
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T KGYG P + I E+ARVD S STF VHS LAM +I +CGSEEQKQ++
Sbjct: 124 ICGLTYKGYGTPDENYVMEGIIAMELARVDVSISTFFGVHSGLAMGSIYICGSEEQKQEW 183
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP +A++ I + LTEP GS A L TT + W+L GQK+WIGN+TFADV +I+
Sbjct: 184 LPKMAKMELIGAFGLTEPEVGSAVAGGLGTTCRQEGDEWVLNGQKKWIGNATFADVTIIW 243
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ ++Q+ G+LV+K PG KIENK+ LR VQN I + VP+ DRL +SF+
Sbjct: 244 ARDEASDQVKGFLVRKGNPGFVAEKIENKMALRTVQNALITMTDCRVPESDRLQKCDSFK 303
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A++Q+ Q LV+M+ N+
Sbjct: 304 DTAKVLRMTRAGVAWQAVGCARGAYEAALKYTKKREQFGKPIASYQLVQNHLVEMVANLT 363
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L ++G +T HASL K + + R R+ V+ RE++GGNGIL + VA+ +
Sbjct: 364 AMQTLCFRLSELQDEGLLTDEHASLAKVFCSMRTRDVVSQAREVMGGNGILLQYDVARFV 423
>gi|256422338|ref|YP_003122991.1| glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
gi|256037246|gb|ACU60790.1| Glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
Length = 454
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/360 (47%), Positives = 242/360 (67%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y +L+ E++A+++KVRE ME E+ PI+ E+W K++FPF ++PKL AL
Sbjct: 64 ELPPVNGDFYDLSGMLSPEDRALQLKVREFMESEVQPIVNEHWVKSDFPFQLLPKLAALD 123
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T +GYG S I EIARVD S +TF V S LAM +I L GSEEQK+++
Sbjct: 124 ICGSTYEGYGGIQSSFLMEGIITMEIARVDCSMATFFGVQSGLAMGSIYLLGSEEQKKEW 183
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + +L I + LTEP GS A+ L TTA + WIL GQK+WIGN+TFADVLVI+
Sbjct: 184 LPGMQRLEKIGAFGLTEPEVGSGAAGGLTTTAKRDGDTWILNGQKKWIGNATFADVLVIW 243
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ N++ G+LVKKD PG +V K+ +K+ LRIVQNG I LK V ++DRL NSF+
Sbjct: 244 ARDVDDNEVKGFLVKKDTPGFSVEKMHDKMALRIVQNGVITLKDCVVEEKDRLQHANSFK 303
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAW +G + G Y+ Y ++RKQFG P+ +FQ+ Q LV+ML N+
Sbjct: 304 DTAKVLRMTRAGVAWLAVGCARGAYENALAYTQKRKQFGRPIGSFQLIQNHLVEMLSNLT 363
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L ++G + HAS+ K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 364 AMQTMVYRLSELQDEGRLEDEHASIAKVFCSLRTRDIVSRAREVMGGNGILLEYNVARFV 423
>gi|399023404|ref|ZP_10725464.1| acyl-CoA dehydrogenase [Chryseobacterium sp. CF314]
gi|398082904|gb|EJL73640.1| acyl-CoA dehydrogenase [Chryseobacterium sp. CF314]
Length = 452
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 166/363 (45%), Positives = 237/363 (65%), Gaps = 1/363 (0%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
P + PP D+Y LT E++ +++KVR MEKE+ P++ YW + EFPF +IPK
Sbjct: 59 PKKELPPVDGDFYDIYHTLTPEQREIQLKVRAFMEKEVKPLVNHYWLRDEFPFELIPKFQ 118
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L + G T +GYGCPG + E+AR+DAS +TF V S LAM +I +CGSEEQK
Sbjct: 119 KLDICGVTYEGYGCPGMPFLMEGVIAMEMARIDASIATFFGVQSGLAMGSIYICGSEEQK 178
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVL 215
QK+LP + + I + LTEP GS A+ L T K GWIL GQK+WIGN+TFAD++
Sbjct: 179 QKWLPQMQKFEKIGAFGLTEPEVGSGAAGGLTVTCKKTSEGWILNGQKKWIGNATFADLV 238
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
+I+AR+ ++ G++V+KD PG +V KI+ K+ LRIVQNG I LK V +E+RL N
Sbjct: 239 IIWARDLDDGEVKGFIVEKDNPGYSVEKIKGKMALRIVQNGLITLKDCLVTEENRLQNAN 298
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF+DT KVL ++R VAW G + G Y+ Y ++R+QFG P+A+FQ+ Q LV+ML
Sbjct: 299 SFKDTGKVLRMTRAGVAWMATGCARGAYESALDYTRKREQFGKPIASFQMIQGHLVEMLS 358
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
N+ AM + +RL ++ ++G + HASL K + T R R+ V+ RE++GGNGIL ++ VA
Sbjct: 359 NLTAMQTMVFRLSEMQDEGILKDEHASLAKVFCTLRTRDIVSRAREVMGGNGILLEYDVA 418
Query: 396 KVI 398
+ +
Sbjct: 419 RFV 421
>gi|373957360|ref|ZP_09617320.1| acyl-CoA dehydrogenase domain-containing protein [Mucilaginibacter
paludis DSM 18603]
gi|373893960|gb|EHQ29857.1| acyl-CoA dehydrogenase domain-containing protein [Mucilaginibacter
paludis DSM 18603]
Length = 452
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 240/360 (66%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y L+ E++ +++KVR ME E+ PI+ EYW KAEFPF +IPKL L
Sbjct: 62 ELPPIEGDFYHLGHTLSPEQRELQLKVRAFMETEVKPIVNEYWLKAEFPFQIIPKLAELN 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T +GYG G S + E+ARVD S STF V S LAM +I LCGSEEQKQ++
Sbjct: 122 ICGLTYQGYGGGGQSFLMEGVLAMEMARVDTSISTFFGVQSGLAMGSIYLCGSEEQKQEW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + Q I + LTEP GS A+ L TTA + WIL GQK+WIGN+TFAD+LVI+
Sbjct: 182 LPRMQQFKAIGAFGLTEPEVGSAAAGGLTTTAKRDGDTWILNGQKKWIGNATFADILVIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ NQ+ G+L++KD PG +V K+ +K+ LRIVQNG I LK + + DRL NSF+
Sbjct: 242 ARDVDDNQVKGFLLRKDTPGFSVEKMHDKMALRIVQNGIITLKDCVIHETDRLQNANSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAWQ +G + G Y+ Y ++RKQFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 DTAKVLQMTRAGVAWQAVGCARGAYESALDYTRKRKQFGKPIASFQLIQNHLVEMLSNLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L ++G + HASL K + + R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 362 AMQTLCFRLSQLQDEGKLNDEHASLAKVFCSLRTRDVVSKAREVMGGNGILLEYDVARFV 421
>gi|120434680|ref|YP_860369.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
gi|117576830|emb|CAL65299.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
Length = 454
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 166/359 (46%), Positives = 235/359 (65%), Gaps = 1/359 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
PP D+Y D LT +++ +++KVR ME EI P++ EYW+K +FPF VI K L +
Sbjct: 64 LPPIDGDFYNLDLKLTEKQREIQLKVRNFMEDEIRPLVNEYWKKDQFPFEVIEKFRDLNI 123
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G +GYGCP I EIARVD S STF VHS LA+ +I LCGSE+QKQ++L
Sbjct: 124 VGVPYEGYGCPNLPFLMEGIIAQEIARVDVSISTFFGVHSGLALGSIYLCGSEDQKQEWL 183
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFA 219
P + ++ I + LTEP GS + T K +G W+L GQK+WIGN+TFADV +I+A
Sbjct: 184 PKMQKMEKIGAFGLTEPNVGSGVAGGLETTCKFDGENWVLNGQKKWIGNATFADVTIIWA 243
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ +NQ+ G+LV+K+ PG KI+ K+ LRIVQN I LK +P+ DRL NSF+D
Sbjct: 244 RDLDSNQVKGFLVRKENPGFKAEKIKGKMALRIVQNALITLKDCKIPESDRLQNANSFKD 303
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T+ VL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A+FQ+ Q LV+ML N+ A
Sbjct: 304 TANVLRMTRAGVAWQAVGCARGAYESALKYTKKREQFGRPIASFQLIQNHLVEMLSNLTA 363
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
M + +RL ++ ++ +T HASL K + + R R+ V+ RE+LGGNGIL D+ VA+ +
Sbjct: 364 MQTMVFRLSEMQDQDLLTDEHASLAKVYCSMRMRDVVSRAREVLGGNGILLDYDVARFV 422
>gi|295135469|ref|YP_003586145.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
gi|294983484|gb|ADF53949.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
Length = 454
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 167/361 (46%), Positives = 235/361 (65%), Gaps = 1/361 (0%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S PP D+Y D LT E++ ++MKVR ME EI P++ ++W +A+FPF +I K L
Sbjct: 62 SDLPPIDGDFYNLDYKLTKEQRELQMKVRHLMEDEIRPLVNDHWNRAKFPFEIIEKFKKL 121
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+AG +GYGCP I EIARVD S STF VHS LAM +I LCGSEEQKQK
Sbjct: 122 NIAGIPYEGYGCPNLPFLMEGIIAQEIARVDVSTSTFFGVHSGLAMGSIYLCGSEEQKQK 181
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVI 217
+LP + +L I + LTEP GS + T K +G WIL GQK+WIGN+TFADV +I
Sbjct: 182 WLPQMQKLEKIGAFGLTEPNVGSGVAGGLETTCKFDGENWILNGQKKWIGNATFADVTII 241
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ +NQ+ G+LV+KD PG K+E+K+ LRIVQN I L V + DRL NSF
Sbjct: 242 WARDEDSNQVKGFLVEKDNPGFKAEKMEDKMALRIVQNAIITLTDCKVAESDRLQNANSF 301
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+ VL ++R VAWQ +G + G Y+ +Y ++R+QFG P+A++Q+ Q LV+M+ N+
Sbjct: 302 KDTANVLRMTRAGVAWQAVGCARGAYESALKYTRKREQFGRPIASYQLVQNHLVEMVSNL 361
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
AM + +RL ++ ++ +T HASL K + + R R+ V+ RE++GGNGIL + VA+
Sbjct: 362 TAMQTLCFRLSEMQDQDMLTDEHASLAKVYCSMRMRDVVSRAREVMGGNGILLEHDVARF 421
Query: 398 I 398
+
Sbjct: 422 V 422
>gi|209515684|ref|ZP_03264548.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
gi|209503920|gb|EEA03912.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
Length = 400
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 173/369 (46%), Positives = 242/369 (65%), Gaps = 2/369 (0%)
Query: 32 FPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
P+ P P SD+Y +L+ +EQA+ KVR ME+ +AP++ +YW +FPF +
Sbjct: 1 MPETKPPRALPAPDSDFYMIHQVLSEDEQALLKKVRSFMERTVAPVINQYWADDKFPFDL 60
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
IP L L + G ++GYGCPG SV E+ARVDAS +TF V S LAM +I L G
Sbjct: 61 IPGLRDLNIVGIGVEGYGCPGGSVLLGGFIAMELARVDASIATFYGVQSGLAMGSIYLGG 120
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNST 210
SEEQKQK+LP + +L + C+ LTEP GS A L TTA + W+L GQKRWIGNS
Sbjct: 121 SEEQKQKWLPPMVRLEKVGCFGLTEPLVGSGAGGGLLTTAKRAGDTWVLNGQKRWIGNSP 180
Query: 211 FADVLVIFARNTTTNQINGYLVK-KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
+ D+ +I+AR+ NQ+ G++V+ K PG +V KIE K+ LR+VQNG I L+ VP+E+
Sbjct: 181 WCDLSIIWARDVDDNQVKGFIVENKTTPGFSVAKIERKVALRVVQNGVITLENCRVPEEN 240
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
RL G +SF+DT++VL ++R VAW+ +G SMG Y+ +Y + R+QFG P+A+FQ+ Q
Sbjct: 241 RLQGDSSFRDTARVLRLTRQYVAWEAVGCSMGAYEHALKYAQTREQFGKPIASFQLVQDL 300
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L +MLGNI A + RL +L ++G + HASL K++ T R RETV RE+LGGNGI+
Sbjct: 301 LAKMLGNITASQCMVVRLAQLQDQGKLKDEHASLAKAFCTVRMRETVGWAREVLGGNGIV 360
Query: 390 SDFLVAKVI 398
D+ VA+ +
Sbjct: 361 LDYNVARFM 369
>gi|404448335|ref|ZP_11013328.1| glutaryl-CoA dehydrogenase [Indibacter alkaliphilus LW1]
gi|403765956|gb|EJZ26831.1| glutaryl-CoA dehydrogenase [Indibacter alkaliphilus LW1]
Length = 452
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 230/360 (63%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y+ L E+ ++++VRE ME EI PI + W KA+FP +IPK+ L
Sbjct: 62 EIPPINGDFYELGKTLPPHEREIQLRVREFMESEIRPIANDCWNKAKFPMEIIPKMAELN 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG T GYGCPGHS E+AR+D S STF V S LAM +I LCGSEEQK ++
Sbjct: 122 IAGLTYSGYGCPGHSALLEGFIAMEMARIDTSISTFFGVQSGLAMGSIYLCGSEEQKHQW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIF 218
L + +L TI + LTEP GS + TT K EG W++ GQK+WIGN+TF+D+ VI+
Sbjct: 182 LSKMQKLETIGAFGLTEPEVGSAVAGGLTTTCKREGDEWVINGQKKWIGNATFSDITVIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ Q+ G++V+KD PG KIENK+ LR VQN I +K VP+ DRL NSF+
Sbjct: 242 ARDLDDQQVKGFIVRKDNPGFQAEKIENKMALRTVQNALITMKDCIVPESDRLQNANSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+ VL ++R VAWQ +G S G Y++ +Y ERKQFG P+A+FQ+ Q LV MLG++
Sbjct: 302 DTAAVLRMTRAGVAWQAVGCSRGAYEVALKYTNERKQFGRPIASFQLVQDLLVTMLGDLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL ++ + + HASL K + T R R+ V REL GGNGIL ++ +A+ +
Sbjct: 362 AMQSMVYRLSQMQDNDELLDEHASLAKVFCTLRMRDIVDHARELFGGNGILLEYDIARFV 421
>gi|311748665|ref|ZP_07722450.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
gi|126577195|gb|EAZ81443.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
Length = 452
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
PP D+Y+ L E+ ++++VRE ME+EI PI YW KAEFP +IPK+ L +
Sbjct: 63 IPPVNGDFYELGKSLPPHEREIQLRVREFMEREIKPIANHYWNKAEFPMQIIPKMAELDI 122
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
AG T +GYGCPGHS E+AR+D S STF V S LAM +I +CGSEEQK+++L
Sbjct: 123 AGLTYQGYGCPGHSALLEGFIAMEMARIDTSISTFFGVQSGLAMGSIYICGSEEQKKEWL 182
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFA 219
P++ +L I + LTEP GS + TT K EG WIL GQK+WIGN+TF+D+ +I+A
Sbjct: 183 PAMQKLEKIGAFGLTEPEVGSGVAGGLTTTCKREGDTWILNGQKKWIGNATFSDLTIIWA 242
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ Q+ G++V+KD PG K+E+K+ LR VQN I L K VP+ DRL NSF+D
Sbjct: 243 RDLDDQQVKGFIVRKDNPGFKAEKLEDKMALRTVQNALITLTKCEVPESDRLQEANSFRD 302
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T+KVL ++R VAWQ +G + G Y++ Y ERKQFG P+A+FQ+ Q LV MLG++ A
Sbjct: 303 TAKVLRMTRAGVAWQAVGCARGAYELALAYTNERKQFGRPIASFQLVQDILVTMLGDLTA 362
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
M + +RL ++ + + HASL K + T R R V REL GGNGIL +A+ +
Sbjct: 363 MQTMVFRLSEMQDGDILKDEHASLAKVFCTLRMRSIVDHARELFGGNGILLKHDIARFV 421
>gi|409123150|ref|ZP_11222545.1| glutaryl-CoA dehydrogenase [Gillisia sp. CBA3202]
Length = 454
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 239/359 (66%), Gaps = 1/359 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
PP D+Y D L+ E++ +++KVR ME E+ P++ ++W +A+FPF VI K L +
Sbjct: 64 LPPIDGDFYNLDLKLSPEQRDLQLKVRNFMEDEVKPLVNDHWNRAKFPFEVIEKFKKLDI 123
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G +GYGCP I EIARVD S STF VHS LAM +I LCGSEEQKQ++L
Sbjct: 124 TGIPYEGYGCPNLPFLMEGIIAQEIARVDVSISTFFGVHSGLAMGSIYLCGSEEQKQEWL 183
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFA 219
P + +L+ I + LTEP GS S T K +G WIL GQK+WIGN+TFADV++I+A
Sbjct: 184 PQMQKLDKIGAFGLTEPEGGSGVSQGMETTCKFDGENWILNGQKKWIGNATFADVIIIWA 243
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ +NQ+ G++V+K+ PG K+E+K+ LRIVQN I L + +P+ DRL +SF+D
Sbjct: 244 RDEDSNQVKGFIVRKENPGFLAEKMEDKMALRIVQNAIITLTECKIPESDRLQKADSFRD 303
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A++Q+ Q LV+ML N+ A
Sbjct: 304 TAKVLKMTRAGVAWQAVGCARGAYESALKYTKKREQFGRPIASYQLIQNHLVEMLSNLTA 363
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
M + +RL +L ++ +T HASL K + + R R+ V+ RE+LGGNGIL ++ VA+ +
Sbjct: 364 MQTMVFRLSELQDQELLTDEHASLAKVYCSMRMRDVVSRAREVLGGNGILLEYDVARFV 422
>gi|300775371|ref|ZP_07085233.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
gi|300506111|gb|EFK37247.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
Length = 452
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 237/360 (65%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y L+ E++ +++KVR MEKE+ P++ YW + EFPF +IPK L
Sbjct: 62 ELPPIDGDFYDIYHTLSPEQREIQLKVRAFMEKEVKPLVNHYWLRDEFPFELIPKFQKLD 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T +GYGCPG + E+AR+DAS +TF V S LAM +I +CGSEEQKQK+
Sbjct: 122 ICGVTYQGYGCPGMPFLMEGVIAMEMARIDASIATFFGVQSGLAMGSIYICGSEEQKQKW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + + I + LTEP GS A+ L T K GW+L GQK+WIGN+TFAD+++I+
Sbjct: 182 LPQMQKFEKIGAFGLTEPEVGSGAAGGLTVTCRKTPEGWVLNGQKKWIGNATFADLVIIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ + ++ G++V+KD PG +V KI+ K+ LRIVQNG I LK + +E+RL NSF+
Sbjct: 242 ARDLDSGEVKGFIVEKDNPGYSVEKIKGKMALRIVQNGLITLKDCLITEENRLQNANSFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT KVL ++R VAW G + G Y+ Y ++R+QFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 DTGKVLRMTRAGVAWMATGCARGAYESALDYTRKREQFGRPIASFQMIQGHLVEMLSNLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL ++ ++G + HASL K + T R R+ V+ RE++GGNGIL ++ VA+ +
Sbjct: 362 AMQTMVFRLSEMQDEGILKDEHASLAKVFCTLRTRDIVSRAREVMGGNGILLEYDVARFV 421
>gi|149280757|ref|ZP_01886865.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
gi|149228504|gb|EDM33915.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
Length = 453
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/361 (46%), Positives = 238/361 (65%), Gaps = 2/361 (0%)
Query: 40 KFPPCASDYYQF-DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
+ PP D+Y D+ L E++A+++KVR +EKE+ P++ +YW KAEFPF +IP++ L
Sbjct: 62 ELPPIEGDFYHLGDEALKDEDRALQLKVRAFLEKEVKPVVNKYWLKAEFPFELIPRIAEL 121
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G T KGYGCP S I E+ARVD S STF V S LAM +I L GSE QKQ+
Sbjct: 122 DICGLTYKGYGCPNKSNLMEGILAMELARVDTSMSTFFGVQSGLAMGSIYLLGSEAQKQQ 181
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+LP + ++ TI + LTEP GS A+ L TTA + WIL GQK+WIGN+ F+DV +I
Sbjct: 182 WLPGMQKMTTIGAFGLTEPEVGSGAAGGLTTTAKRQGSKWILNGQKKWIGNAPFSDVTII 241
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ Q+ G+LV+K G V K+ +K+ LRIVQNG I L V +EDRL NSF
Sbjct: 242 WARDLDDQQVKGFLVRKGTKGFEVEKMMDKMALRIVQNGLITLTNCEVDEEDRLQNANSF 301
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+KVL ++R VAWQ +G + G Y+ +Y + RKQFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 KDTAKVLQMTRAGVAWQAVGCARGAYESALQYTRTRKQFGRPIASFQLIQNHLVEMLSNL 361
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
AM + +RL +L ++ +T HASL K + + + R+ V+ RE++GGNGIL ++ VA+
Sbjct: 362 TAMQTLCFRLSQLQDQNMLTDEHASLAKVFCSMKTRDVVSRAREVMGGNGILLEYDVARF 421
Query: 398 I 398
+
Sbjct: 422 V 422
>gi|78062246|ref|YP_372154.1| acyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77970131|gb|ABB11510.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
Length = 400
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 1/359 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P D+YQ L +E +R++VR MEKE+ PI+ E+W + EFPF ++PK AL +
Sbjct: 11 LPEADGDFYQLARTLPDDENEIRLRVRAFMEKEVQPIINEFWMRDEFPFELLPKFKALGI 70
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
AG +GYGCPG S T + E+ARVDAS STF VH+ LAM +IA+CGS+EQK+ +L
Sbjct: 71 AGLPFQGYGCPGKSTTLMGFVMMELARVDASISTFFGVHTGLAMGSIAICGSDEQKRTWL 130
Query: 161 PSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P +A L+ I + LTEP GS AS L T+A + WIL GQK+WIGN+T+ DV VI+A
Sbjct: 131 PPMAALDKIGSFGLTEPLVGSGASGGLLTSARRDGDTWILNGQKKWIGNATWGDVTVIWA 190
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ NQ+ G++V+ PG V KI++K+ LR+VQNG I + V + +RL NSF+D
Sbjct: 191 RDVADNQVKGFIVENRTPGFHVDKIQHKMALRVVQNGLITMTDCRVSEANRLQNANSFKD 250
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T++VL ++R VAW+ +G + G Y+ RY +ER+QFG P+A+FQ+ Q L +ML NI +
Sbjct: 251 TAQVLKMTRAAVAWESVGCATGAYEHAVRYAQERQQFGRPIASFQLVQDLLFRMLCNITS 310
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ RL ++ + G M HASL K T R RETV RELLG NGIL D V + +
Sbjct: 311 TQALCHRLSQMQDAGIMQDEHASLAKGLCTVRMRETVGWARELLGANGILLDHHVGRFV 369
>gi|325955609|ref|YP_004239269.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
gi|323438227|gb|ADX68691.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
Length = 452
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 230/360 (63%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP D+Y L E + ++ KVRE ME +I P++ +YW + EFPF +IP L
Sbjct: 62 ELPPIDGDFYDVYHELPPELRVIQQKVREVMETKIQPLVNDYWLRDEFPFEIIPIFQELN 121
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G T +GYGCP + E+AR+DAS +TF V S L M +I LCGS+EQK K+
Sbjct: 122 ICGVTYEGYGCPNLPFLMEGVIAHEMARIDASIATFFGVQSGLVMGSIYLCGSDEQKNKW 181
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP L QL I + LTEP S A+ L TT K E GW+L G+K+WIGN+ FADV +I+
Sbjct: 182 LPELQQLKKIGAFGLTEPEVDSGAAGGLTTTCEKTENGWLLNGEKKWIGNAPFADVFIIW 241
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ +Q+ G+LV+KD PG++V KI+ K+ LRIVQNG I L VPD D+L N+F+
Sbjct: 242 ARDIADDQVKGFLVEKDNPGISVEKIKGKMALRIVQNGQITLNNCLVPDTDKLEKANTFK 301
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+ VL ++R VAW G + G Y+ Y ++R+QFG P+A+FQ+ Q LV+ML N+
Sbjct: 302 DTANVLRMTRAGVAWMATGCARGAYENALDYTRKREQFGKPIASFQLIQGHLVEMLSNLT 361
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL K+ ++G + HASL K + T R R+ VA RE++GGNGIL D VA+ +
Sbjct: 362 AMQTMVYRLSKIQDEGKLKDEHASLAKVFCTLRTRDIVAHAREVMGGNGILLDHNVARFV 421
>gi|255641512|gb|ACU21030.1| unknown [Glycine max]
Length = 216
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 183/216 (84%), Gaps = 2/216 (0%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M I+SSK+ D +NA SYF P LD+S AFPQATPAS FPPCASDY+Q D+LLT+EEQ
Sbjct: 1 MAINSSKNPDGSVQNAMPSYFYSPPLDVSAAFPQATPASTFPPCASDYFQLDNLLTAEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKEIAPIM EYWEKA+FPFHVIPKLGALR+AGGTIK YGCPG S+TG+AI
Sbjct: 61 AIRKKVRECMEKEIAPIMTEYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A+AE+ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL +ACWALTEP YG
Sbjct: 121 AVAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLQAVACWALTEPDYG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
SDASAL T + G WILEG K NSTFADVLV
Sbjct: 181 SDASALKTL-PQSGGSWILEG-KAVDRNSTFADVLV 214
>gi|255039418|ref|YP_003090039.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254952174|gb|ACT96874.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
18053]
Length = 452
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 236/372 (63%), Gaps = 3/372 (0%)
Query: 30 VAFPQA-TPASKFPPCAS-DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEF 87
+ F QA + K PP + D+Y+ L+ EE+ +++KVR+ ME EI PI YW A+F
Sbjct: 50 LKFMQAGSGKKKAPPVVNGDFYELASTLSPEEREIQLKVRDFMETEIRPIANYYWNNAQF 109
Query: 88 PFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTI 147
P H+I + L + G T +GYGC G S E+ARVD+S STF VHS LAM +I
Sbjct: 110 PMHIIALMARLNICGLTYQGYGCAGRSALLEGFIAMEMARVDSSISTFFGVHSGLAMGSI 169
Query: 148 ALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWI 206
LCGSEEQKQ++LP + ++ I + LTEP GS A+ TT K EG W++ GQK+WI
Sbjct: 170 YLCGSEEQKQQWLPVMQRMELIGAFGLTEPEVGSGAAGGLTTTCKKEGDEWVINGQKKWI 229
Query: 207 GNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
GN+TF+D+ +I+AR+ NQ+ G++VKK+ PG K+E+K+ LR VQN I L VP
Sbjct: 230 GNATFSDITIIWARDLGDNQVKGFIVKKENPGFKAEKMEDKMALRTVQNALITLTDCRVP 289
Query: 267 DEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQIN 326
+ DRL NSF+DT+ VL ++R VAWQ +G G Y++ +Y +RKQFG P+A FQ+
Sbjct: 290 ETDRLQNANSFKDTANVLRMTRAGVAWQAVGCGRGAYELALKYTMQRKQFGRPIAGFQLV 349
Query: 327 QQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGN 386
Q LV MLG++ AM + +RL +L + G + HASL K + T R R V REL GGN
Sbjct: 350 QDLLVTMLGDLTAMQTMVYRLSQLQDAGDLADEHASLAKVFCTLRMRSIVDHARELFGGN 409
Query: 387 GILSDFLVAKVI 398
GIL ++ +A+ +
Sbjct: 410 GILLEYDIARFV 421
>gi|298206885|ref|YP_003715064.1| acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
gi|83849519|gb|EAP87387.1| Acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
Length = 453
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/360 (45%), Positives = 231/360 (64%), Gaps = 1/360 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
K PP D+Y LT E++ +++KVR ME E+ PI EYW+KAEFP +IPKL L
Sbjct: 63 KLPPIDGDFYDLSLKLTPEQREIQLKVRNFMEDEVRPIANEYWKKAEFPQQIIPKLATLN 122
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+AG KGYGCP + I E+ARVD S STF VHS LAM +I LCGSEEQK ++
Sbjct: 123 IAGIAYKGYGCPEQNFVMEGIIAIEMARVDVSMSTFFGVHSGLAMGSIYLCGSEEQKLEW 182
Query: 160 LPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + ++ I + LTEP GS S + TT + WIL GQK+WIGN+TFADV +++
Sbjct: 183 LPKMQRMEAIGAFGLTEPNVGSAISQGMETTCQRDGDTWILNGQKKWIGNATFADVTIVW 242
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
A++ Q+ G+LV+K PG + KIE+K+ LR V+N I + + + DRL NSF+
Sbjct: 243 AKDVDDKQVKGFLVRKGTPGFSPEKIEDKMALRTVENALITITDCRISESDRLQEANSFK 302
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DT+KVL ++R VAWQ +G + G Y+ +Y K+R+QFG P+A FQ+ Q LV+ML N+
Sbjct: 303 DTAKVLKMTRAGVAWQAVGCARGAYESAVKYCKKREQFGKPIATFQLIQNHLVEMLANLT 362
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
AM + +RL +L ++G + ASL K + + R R+ V+ RE++GGNGIL + VA+ +
Sbjct: 363 AMQTLCYRLSELQDEGLLKDEQASLAKVFCSMRTRDVVSRAREVMGGNGILLEHDVARFV 422
>gi|374366073|ref|ZP_09624157.1| acyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
gi|373102364|gb|EHP43401.1| acyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
Length = 401
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/364 (47%), Positives = 235/364 (64%), Gaps = 2/364 (0%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A P P SD+Y +LL+ EQA +VR ME +AP++ ++W FPF +IP
Sbjct: 5 AKPNHPLPAPDSDFYLIHELLSDTEQAQLKQVRAFMENRVAPVINKFWADDAFPFELIPG 64
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+ L + G +GYGCPG S E+ARVD+S +TF VHS LAM +I L GSEE
Sbjct: 65 IRDLNIVGVGFEGYGCPGGSTLLDGFIAMELARVDSSIATFYGVHSGLAMGSIYLGGSEE 124
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFAD 213
QKQK+LP +A+L + C+ LTEP GS A T K EG W++ GQKRWIGNS + D
Sbjct: 125 QKQKWLPPMARLEKVGCFGLTEPLVGSGAGGGLLTTAKREGDTWVINGQKRWIGNSPWCD 184
Query: 214 VLVIFARNTTTNQINGYLVK-KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
+ +I+AR+ NQ+ G++V+ K G +V KIENKI LR+VQNG I L VP+E+RL
Sbjct: 185 LSIIWARDVDDNQVKGFIVENKTTAGFSVEKIENKIALRVVQNGVITLDHCRVPEENRLQ 244
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
G SF+DT++VL ++R VAW+ +G SMG Y+ RY + R+QFG P+A+FQ+ Q L +
Sbjct: 245 GDLSFRDTARVLRLTRQYVAWESVGCSMGAYEHALRYAQTREQFGKPIASFQMVQDLLAK 304
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
MLGNI A + RL +L ++G + HASL K++ T R RETVA RE+LGGNGI+ D+
Sbjct: 305 MLGNITASQCMVARLAQLQDQGKLLDEHASLAKAFCTVRMRETVASAREILGGNGIVLDY 364
Query: 393 LVAK 396
VA+
Sbjct: 365 NVAR 368
>gi|327402488|ref|YP_004343326.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
gi|327317996|gb|AEA42488.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
Length = 451
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 228/363 (62%), Gaps = 1/363 (0%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
P + P D+Y L EE+ +++KVR ME EI PI+ +YW + EFP H+IPK+
Sbjct: 58 PKKELPAIDGDFYNISHTLNPEERVLQLKVRAFMETEIKPIVNDYWRRGEFPHHIIPKVA 117
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L + G +GY P S + E+ARVD S +TF V S L M +I L GSEEQK
Sbjct: 118 ELDICGIAYEGYSNPVRSYLMEGVLAMEMARVDVSFATFFGVQSGLVMGSIFLLGSEEQK 177
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
Q++LP L L I + LTEP GS A L A ++ W L GQK+WIGN+TFADV+
Sbjct: 178 QEWLPELKNLRKIGAFGLTEPEVGSGVAGGLTMKAKRIGNSWTLNGQKKWIGNATFADVI 237
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
+I+A + +Q+ G+LV+KD PGL V K+E+K+ LRIVQNG I L V + DRL N
Sbjct: 238 IIWAEDEEDHQVKGFLVRKDTPGLAVEKMEDKMALRIVQNGIITLTDCLVEEVDRLQKAN 297
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF+DT+ VL ++R VAW +G + G Y+ +Y +ERKQFG P+A+FQ+ Q LV+ML
Sbjct: 298 SFKDTANVLRMTRAGVAWLAVGCARGAYESALKYTRERKQFGKPIASFQLIQNHLVEMLT 357
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
N+ AM + RL +L ++ +T HASL K + + R R+ V+ RE++GGNGIL ++ VA
Sbjct: 358 NLTAMQTMVARLSELQDQNELTDEHASLAKVFCSLRTRDIVSKAREVMGGNGILLEYDVA 417
Query: 396 KVI 398
+ +
Sbjct: 418 RFV 420
>gi|390444954|ref|ZP_10232720.1| glutaryl-CoA dehydrogenase [Nitritalea halalkaliphila LW7]
gi|389663517|gb|EIM75042.1| glutaryl-CoA dehydrogenase [Nitritalea halalkaliphila LW7]
Length = 447
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
Q K P D+Y L++E++ +++KVR ME+EI PI +YW +AEFP H+IP
Sbjct: 51 QNGQEKKIPEVNGDFYGLGKTLSAEDREIQLKVRAFMEEEIRPIANDYWNRAEFPMHIIP 110
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
K+ L + G KGYGCPG S E+ARVD S STF V S LAM +I LCGSE
Sbjct: 111 KMAELNIGGLIYKGYGCPGKSALLEGFIAMEMARVDTSISTFFGVQSGLAMGSIYLCGSE 170
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFA 212
EQKQ++LP + +L I + LTEP GS + TT K EG WIL GQK+WIGN+TF+
Sbjct: 171 EQKQEFLPPMQRLEKIGAFGLTEPEVGSAVAGGLTTTCKREGDEWILNGQKKWIGNATFS 230
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
D+ +I+AR+ + Q+ G++V KD PG K+ENK+ LR VQN I LK VP+ RL
Sbjct: 231 DITIIWARDLDSQQVKGFIVPKDTPGFQAEKMENKMALRTVQNALITLKDCRVPESLRLQ 290
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
SF+DT+ VL ++R VAWQ +G + G Y+ Y +R QFG P+A++Q+ Q LV
Sbjct: 291 KAESFKDTAAVLRMTRAGVAWQAVGCARGAYEAALAYTNKRAQFGKPIASYQLVQDLLVT 350
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
MLG++ AM + RL + ++ A+ HASL K + T R R V REL GGNGIL +
Sbjct: 351 MLGDLTAMQTMVHRLSVMQDEEALLDEHASLAKVFCTLRMRSIVDHARELFGGNGILLEH 410
Query: 393 LVAKVI 398
+A+ +
Sbjct: 411 DIARFV 416
>gi|281203495|gb|EFA77695.1| putative acyl-CoA oxidase [Polysphondylium pallidum PN500]
Length = 421
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 231/352 (65%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DYY LL++++ +R K ++ E+ I PI+ EY+EKAEFP H++PKL L AG IK
Sbjct: 34 DYYSITQLLSNDQLDIRNKAKQFAEQHIQPIVNEYYEKAEFPMHLLPKLKELNWAGSNIK 93
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GY CPG + E A+ A +TF + +++ML I CGSE+QKQ YLP +A +
Sbjct: 94 GYSCPGIDAVSCGLIAFEFAKKSADIATFFGILQTISMLPIYYCGSEKQKQYYLPKMASM 153
Query: 167 NTIACWALTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I + LTEP GSDA+ L A + +G W L G+KRWIGN+ FADV++I+ARNT T
Sbjct: 154 EKIGAFGLTEPNAGSDAAGLFCEAKQNSDGTWTLNGEKRWIGNAPFADVVIIWARNTDTK 213
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF-QDTSKVL 284
ING++++K+ PG+TV I NKI LR+VQNG I LK + DE+RLP F K L
Sbjct: 214 LINGFVIEKNTPGMTVETINNKIALRMVQNGHIYLKNCILSDENRLPLAKDFGSGPGKSL 273
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
++R++ +W +GI+ Y+ C +Y+KERKQFG LA +Q+ Q++LV+MLG IQ+M L+
Sbjct: 274 FLTRIVASWIALGIACSAYESCIKYVKERKQFGQSLAKYQLVQERLVKMLGIIQSMSLMT 333
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ L+++ +T G L K+ T+ R+ V++ RELLGGNGI++DF VA+
Sbjct: 334 LRISHLFDQNKLTYGQVGLLKAHNTSHGRQVVSMARELLGGNGIVTDFGVAR 385
>gi|108805257|ref|YP_645194.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108766500|gb|ABG05382.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 398
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 1/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+DYY ++ ++ E++ +R +VR+ ++E+ P+M YW + EFPF ++PKL L +AG
Sbjct: 10 GTDYYMVEEWMSEEDREIRDRVRDFCDREVIPVMGGYWNREEFPFELVPKLARLNIAGHV 69
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YGCP S + + + E++R D S STF VHS LAM +IAL GSEEQ+Q++LP +
Sbjct: 70 IPREYGCPEMSNLASGLVMMELSRGDGSLSTFFGVHSGLAMTSIALLGSEEQRQRWLPPM 129
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A++ I +ALTEP +GSD L T+A + GW+L G+KRWIGN TFADV+V++AR+
Sbjct: 130 ARMEKIGAFALTEPGHGSDVVMLETSAERDGDGWVLNGRKRWIGNGTFADVVVVWARDEE 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
++ G+LV+K G T +IE KIG R DI L+ V VP E++L NSF DTS V
Sbjct: 190 DGEVKGFLVEKGTEGFTAERIEGKIGNRSSWQADITLENVRVPAENKLENANSFADTSTV 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R VAWQ +G ++ Y+ +Y KER+ FG P A+FQ+ Q +L ML ++ M LV
Sbjct: 250 LTNTRYGVAWQALGHALACYEAAVQYAKEREIFGIPQASFQLIQYRLAGMLADLTQMQLV 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+RL +L +KG MT G ASL K + + A R++LGGNG+L ++LV K
Sbjct: 310 CFRLSQLLDKGEMTHGRASLAKLVTARQGKRICAEARDILGGNGVLLEYLVGK 362
>gi|383780646|ref|YP_005465212.1| putative glutaryl-CoA dehydrogenase [Actinoplanes missouriensis
431]
gi|381373878|dbj|BAL90696.1| putative glutaryl-CoA dehydrogenase [Actinoplanes missouriensis
431]
Length = 380
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 230/355 (64%), Gaps = 9/355 (2%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A D Y F LLT +E A+ +VR+ + E+ PI EYW +AEFP H++ + L +AG
Sbjct: 3 AGDLYAFQGLLTDDESAIVQRVRDFLASEVTPIANEYWSRAEFPTHLVKRFAGLGLAG-- 60
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
S+ +A+ E+ DAS +TF VH+ LAM +I CGS EQ++++LP++
Sbjct: 61 -----VERSSLLNGWLAL-EMGHADASMATFYGVHAGLAMGSIQTCGSPEQQERWLPAMT 114
Query: 165 QLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
+ I +ALTEP GSD A+ L TT + W+L G KRWIGN+TFAD++V++AR+T+
Sbjct: 115 AFDQIGAFALTEPTGGSDVAAGLRTTCARDGDTWVLNGAKRWIGNATFADLIVVWARDTS 174
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
NQ+ G++V DAPGLT TKIENKI LRIVQN DI L V VP+ DRL NSF+DT+KV
Sbjct: 175 DNQVKGFVVPGDAPGLTATKIENKIALRIVQNADITLDGVRVPEADRLQRANSFKDTAKV 234
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R VAWQ +G+ + Y++ Y KER+QFG P+A FQ+ Q LV+M+GN+ A + +
Sbjct: 235 LRQTRAGVAWQAVGVMLAAYEIALDYAKEREQFGRPIAKFQLVQDLLVRMVGNVTASLGM 294
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L ++G H++L K++ T R RE V RELL GNGI+ D+ + + +
Sbjct: 295 CVRLAQLQDEGVYKDEHSALAKAYCTTRMREVVGWARELLAGNGIVLDYDIGRFV 349
>gi|115467962|ref|NP_001057580.1| Os06g0346300 [Oryza sativa Japonica Group]
gi|113595620|dbj|BAF19494.1| Os06g0346300 [Oryza sativa Japonica Group]
gi|125597140|gb|EAZ36920.1| hypothetical protein OsJ_21259 [Oryza sativa Japonica Group]
Length = 304
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/275 (58%), Positives = 200/275 (72%), Gaps = 31/275 (11%)
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203
M++IA GSE QK+KYL L+++ + +AL+EP +GSDAS+LNTTA KV GGWIL GQK
Sbjct: 1 MVSIAQLGSEAQKEKYLRPLSKMQKVCVYALSEPNHGSDASSLNTTARKVPGGWILNGQK 60
Query: 204 RWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKV 263
RW NS+FAD+ V+ A NT+TNQING++V APGL ++KI+NK+ LR+VQN DILL+ V
Sbjct: 61 RWPANSSFADIFVVLACNTSTNQINGFIVNGGAPGLKISKIDNKMSLRVVQNCDILLEDV 120
Query: 264 FVPDEDRLPGVNSFQDTSKV----------------------LAVSRVMVAWQPIGISMG 301
FVPD+DRLPG NSFQD K+ L+ SRV+VAW IGI+ G
Sbjct: 121 FVPDDDRLPGANSFQDLVKIYSISPHTIGDTDLTDYVAYIQALSFSRVIVAWISIGIAAG 180
Query: 302 VYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361
VYD C RYL ERKQFGAPLAAFQ+NQ+KL M L+GWRL +L++ G MT G A
Sbjct: 181 VYDACLRYLGERKQFGAPLAAFQLNQEKL---------MWLLGWRLYELHDSGRMTTGQA 231
Query: 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
SLGK+WIT +ARETVALGRELLGGNGI++DF V K
Sbjct: 232 SLGKAWITKKARETVALGRELLGGNGIVTDFHVGK 266
>gi|388495408|gb|AFK35770.1| unknown [Medicago truncatula]
Length = 205
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/189 (82%), Positives = 166/189 (87%), Gaps = 2/189 (1%)
Query: 6 SKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMK 65
S QD + SYF+LP LD+S+AFPQATPAS FPPCASDY+QFDDLL EEQA+RMK
Sbjct: 4 SNPQDKIGN--MPSYFDLPPLDVSLAFPQATPASTFPPCASDYFQFDDLLKPEEQAIRMK 61
Query: 66 VRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEI 125
VRECMEK IAPIMA+YWEKAEFPFH IPKLG L +AGGTIKGYGCPG SVTG+AIA AE+
Sbjct: 62 VRECMEKNIAPIMAQYWEKAEFPFHAIPKLGELGIAGGTIKGYGCPGLSVTGSAIATAEV 121
Query: 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASA 185
ARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL TIACWALTEP YGSDASA
Sbjct: 122 ARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASA 181
Query: 186 LNTTATKVE 194
L TTATKV+
Sbjct: 182 LKTTATKVQ 190
>gi|340505599|gb|EGR31915.1| hypothetical protein IMG5_099950 [Ichthyophthirius multifiliis]
Length = 409
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 165/367 (44%), Positives = 229/367 (62%), Gaps = 8/367 (2%)
Query: 39 SKFPPCAS--DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
++FP S DY+ F LLTSE+ R RE + KEIAP + EY EKA+FP V+PK
Sbjct: 13 TQFPIVESSIDYFDFPSLLTSEQNTTRKAFREFLHKEIAPYINEYIEKAQFPDFVLPKFR 72
Query: 97 ALRVAGGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
+ + YG S+ I AEI+RVDAS +TF V SSL M TI + GSEEQ
Sbjct: 73 QFGLFNHLLNAPYGLSS-SILSQGILFAEISRVDASLATFSAVQSSLLMSTIEILGSEEQ 131
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFAD 213
K KYLP L L + W LTE GSDAS+L T+ + G WIL G KRWIGN D
Sbjct: 132 KNKYLPKLRDLELVGGWGLTEEKVGSDASSLQTSVKRDPSGKGWILNGNKRWIGNGN-KD 190
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+++++ARN N++ G++V +PG+ I+NK+ LR+VQN I V +P+E+ LP
Sbjct: 191 IMIVWARNVENNKVQGFIVDLKSPGVNSVVIKNKLALRMVQNCQIQFNNVHIPEENFLPK 250
Query: 274 VNSFQD-TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
FQ TSK+L SR++V W G++MGVYD +Y+ ERKQFG +++FQI Q+K+ +
Sbjct: 251 ATDFQKGTSKILLHSRLIVCWITFGVAMGVYDHTIKYMNERKQFGVKISSFQIQQEKIQR 310
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
++ N+QA++ + WRL LY++G +T G +LGK++ T R RE LGRE+ GGNGI+ D
Sbjct: 311 IMSNVQAILFLCWRLSVLYDQGNITIGQVALGKAFATERTREITRLGREIFGGNGIIFDN 370
Query: 393 LVAKVIM 399
V K ++
Sbjct: 371 YVMKALV 377
>gi|375012875|ref|YP_004989863.1| acyl-CoA dehydrogenase [Owenweeksia hongkongensis DSM 17368]
gi|359348799|gb|AEV33218.1| acyl-CoA dehydrogenase [Owenweeksia hongkongensis DSM 17368]
Length = 439
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 220/358 (61%), Gaps = 1/358 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P DYYQ LLT EE+ +++VRE M + + PI EYW KA+FP H+IPK+ L +A
Sbjct: 51 PEIEGDYYQLARLLTKEEREKQLEVREFMNEHVKPIANEYWNKAQFPMHIIPKMAELNIA 110
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G T +GY P S E+ARVD S STF V S LAM +I CGSEEQK+K+LP
Sbjct: 111 GLTYEGYNSPMGSYLLEGFITVEMARVDTSISTFFGVQSGLAMGSIYFCGSEEQKKKWLP 170
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
+ +L I + LTEP GS A L TT K WIL GQK+WIGN+TFAD+++I+AR
Sbjct: 171 PMQRLEKIGAFGLTEPNVGSAVAGGLETTCKKEGDKWILNGQKKWIGNATFADLVIIWAR 230
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
N N++ G++V+K G K E+K+ LR VQN I L V +E+RL +SF+DT
Sbjct: 231 NVEDNEVRGFIVEKGTAGFKAEKQEDKMALRTVQNALITLTDCEVSEENRLQNCDSFRDT 290
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
SKVL +R VAWQ +G + G Y++ Y RKQFG P+ +FQ+ Q LV+ML ++ A+
Sbjct: 291 SKVLKATRAGVAWQAVGCARGAYELALNYSHTRKQFGKPIGSFQLVQDLLVEMLTDLTAI 350
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ + L KL ++G MT ASL K + RE V RE+ GGNGIL + +A+ +
Sbjct: 351 QSMAFHLSKLQDEGRMTDQQASLAKVACSRHTREIVGKAREIFGGNGILLEHDIARFV 408
>gi|159482534|ref|XP_001699324.1| hypothetical protein CHLREDRAFT_40101 [Chlamydomonas reinhardtii]
gi|158272960|gb|EDO98754.1| predicted protein [Chlamydomonas reinhardtii]
Length = 324
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 214/334 (64%), Gaps = 18/334 (5%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
QAT ++ FPP D D LL+ EE+A+R +VR ME +AP++A+YWEKAEFP ++P
Sbjct: 1 QATTSAAFPPAVFDLLALDGLLSPEERALRDRVRAYMETHVAPVIADYWEKAEFPHPLVP 60
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDAS--CSTFILVHSSLAMLTIALCG 151
AL +AGG IKGYGCP T A +E+ D S+F + + + + +CG
Sbjct: 61 SFAALGLAGGPIKGYGCPVTCKTKPAPTASELLTEDTEYRASSFRVEPAKSLCVRVCVCG 120
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTF 211
SEEQKQ+ LP +A+ + CWALTEP+ GSDASAL +TATKV GGW+L G KRWIGN T+
Sbjct: 121 SEEQKQELLPRMAKFELVGCWALTEPSNGSDASALTSTATKVPGGWMLNGYKRWIGNGTW 180
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
ADV +++ARN Q+N ++V+K PGL +KI+NKI LR VQN D+ + FVPD RL
Sbjct: 181 ADVCIMWARNNQDGQVNAFIVRKGNPGLRTSKIQNKIALRCVQNADMEFSQCFVPDSARL 240
Query: 272 PGVNSFQDTSKVLAVSRV-MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
PGV++F DT+KV A R V W RY ERKQFG+ L FQ+ Q++L
Sbjct: 241 PGVSNFNDTNKVSACVRSGEVGWV-------------RYCSERKQFGSALGGFQLVQERL 287
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364
+M G IQAM L WRL KLYE+G MT H +G
Sbjct: 288 ARMGGTIQAMWLACWRLSKLYEEGRMT--HEQVG 319
>gi|116669176|ref|YP_830109.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
FB24]
gi|116609285|gb|ABK02009.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
Length = 410
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/382 (43%), Positives = 237/382 (62%), Gaps = 15/382 (3%)
Query: 25 ALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
A+ + A P A P +D++ F+ LL+ E+ ++RE + EIAP E+W
Sbjct: 5 AVPVQPAAPAANDVDSLP--TADFFGFESLLSDRERRKLEELREFLAAEIAPFATEWWNN 62
Query: 85 AEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAM 144
AEFP H++PKL AL ++ +GY H G + IAEI RVD S +TF LVH L +
Sbjct: 63 AEFPAHILPKLAALELSAPAQRGYS---HLFAG--LVIAEITRVDTSIATFFLVHHDLFV 117
Query: 145 LTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGG------- 196
++ GS+EQK + L A L T +ALTEP +GSD A + T A +V GG
Sbjct: 118 ESLYGFGSDEQKARLLDDAASLRTTGAFALTEPEHGSDVAGGMETRARRVPGGADDGGDC 177
Query: 197 WILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNG 256
WIL G KRWIGN TF D ++++AR+ I G++V PG++ ++IENKI LR VQN
Sbjct: 178 WILNGAKRWIGNGTFCDYMLVWARDEADGAIRGFIVDAALPGVSRSRIENKIALRTVQNA 237
Query: 257 DILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF 316
DI+ + V V + DR G++SF+DT+++L SR+MVAWQ +G + +D+ ++ ER+QF
Sbjct: 238 DIVFRDVRVAETDRFAGISSFEDTNELLRGSRIMVAWQAVGQQLAAFDVARQHAVERQQF 297
Query: 317 GAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETV 376
G PLA FQ+ QQ+LV MLGN A + + R+ +L + GA +L KS+ +AR RETV
Sbjct: 298 GRPLAKFQLIQQQLVTMLGNAVASMGMMVRIAQLQQDGAADMAQVALAKSYTSARMRETV 357
Query: 377 ALGRELLGGNGILSDFLVAKVI 398
A+GR +LGGNGI+SDF +AK+
Sbjct: 358 AMGRSILGGNGIVSDFRMAKIF 379
>gi|296140732|ref|YP_003647975.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella
paurometabola DSM 20162]
gi|296028866|gb|ADG79636.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
DSM 20162]
Length = 402
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 228/352 (64%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+DY +L+T +E A+ +KVRE E+E+ PI+ +YWE+ EFPF ++P L L + G T
Sbjct: 18 GTDYLHMRELITDDEAALLLKVREFGERELLPIVNDYWERGEFPFEILPGLRELEIVGDT 77
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYG + G + E+ R+D S TFI VH LAM +I + GSEEQ+Q++LP++A
Sbjct: 78 MQGYGTTPMTAVGQGLVSYELGRIDGSIGTFIGVHVGLAMQSIYILGSEEQRQRWLPAMA 137
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+L I +ALTEP +GSD+ AL TAT+ W++ G KRW GN+ + D++++FAR+T
Sbjct: 138 RLEKIGAFALTEPNHGSDSVALEATATRDGDHWVINGAKRWPGNAVWCDIIIVFARDTAD 197
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V+KD PG TKI K+ LR+VQN DI+L + +PD+ RL N F D SKVL
Sbjct: 198 GKVKGFVVEKDDPGYRATKIGGKVSLRMVQNADIVLDDLRIPDDRRLVNCNGFPDVSKVL 257
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R VAW G ++ Y++ Y ++R QFG P+A Q+ Q KLV+MLG + AM L
Sbjct: 258 MGTRNQVAWASTGHAVAAYEIALNYAQKRVQFGKPIANTQVVQSKLVEMLGEVTAMQLYC 317
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L ++GA+T A+L K + + +AR L R++LGGNGI +F V +
Sbjct: 318 IRLGRLLDEGAVTDTMAALAKYFCSVKARHVCRLARDVLGGNGITLEFHVMR 369
>gi|433648327|ref|YP_007293329.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
gi|433298104|gb|AGB23924.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
Length = 394
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 223/355 (62%), Gaps = 1/355 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
++D+Y + LL +E+ +VR+ M+ E+ P + +W++ FPF ++P L +AG
Sbjct: 9 SADFYALEALLVGDEREFLHRVRDFMKSEVEPTVNSHWQRGSFPFEIVPGFRQLGLAGLP 68
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
KG+GCPG S + E+AR D S +TF VH L+M +I LCG++EQ+ +YLPS+
Sbjct: 69 YKGFGCPGRSYLLDGMVAMELARTDPSIATFSGVHGGLSMGSIYLCGNDEQRARYLPSMV 128
Query: 165 QLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
I + LTEP GS AS L TTA + WIL GQK+WIGN+TF D+ VI+A++
Sbjct: 129 CFEKIGAFGLTEPDVGSGASRGLTTTAMRDGDSWILNGQKKWIGNATFGDLTVIWAKDVA 188
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
Q+ G++V D PG + TK+++KI LRIVQN I L+ V V +EDRL NSF+DT++V
Sbjct: 189 DGQVKGFIVANDTPGFSTTKLDDKIALRIVQNAVITLEDVRVSEEDRLQNANSFRDTAEV 248
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L ++R VAW +G + G Y+ Y R+QFG P+A FQ+ Q LV+MLGNI + +
Sbjct: 249 LRMTRAGVAWMAVGCARGAYENALAYAVSREQFGRPIAGFQLVQDLLVRMLGNITSSWAL 308
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L ++G H+SL K+W T R RETV RELLGGNGIL + V + +
Sbjct: 309 CARLSQLQDEGRADDRHSSLAKAWCTVRMRETVGYARELLGGNGILLEHNVGRFV 363
>gi|379735198|ref|YP_005328704.1| acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
gi|378783005|emb|CCG02673.1| Acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
Length = 395
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 226/350 (64%), Gaps = 1/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y F+DLL EE A+R +VR E+E+ P + +YWE+A+FPF ++P+L + V GG I+
Sbjct: 7 DFYAFEDLLEPEEIAIRDRVRAFGEQEVLPRINDYWERADFPFELVPRLAEIGVVGGIIE 66
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S A + AE+AR D S TF VHS LAM +IAL G EEQ++++LP +A+L
Sbjct: 67 GYGCPGMSNVAAGLVAAELARADGSIGTFNGVHSFLAMQSIALLGDEEQRERWLPEMARL 126
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I + LTEP +GSDA L T+A + ++L GQK+WIGN + AD ++++AR
Sbjct: 127 EKIGAFGLTEPRHGSDAVGLETSARRDGDAYVLNGQKKWIGNGSIADYVIVWARG-EDGA 185
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
++GY+V+K PG T + K LR V +I L V VP E++L +SF+D S+VL
Sbjct: 186 VSGYVVEKGTPGYEATVMTGKTALRAVWQAEITLTDVRVPAENKLANCHSFKDVSQVLDR 245
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R VAW+ +G++ Y++ + +R+QFG P+A FQ+ Q KL +ML I +M L+ WR
Sbjct: 246 TRYTVAWRALGLATASYELALAHALQREQFGQPIAGFQLVQDKLARMLAEITSMQLMCWR 305
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L KL + G MT ASL K A+AR VA R++LGG+GIL D VA+
Sbjct: 306 LSKLADAGKMTAAMASLAKMNHAAKARAIVADARDILGGDGILIDHHVAR 355
>gi|330797571|ref|XP_003286833.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
gi|325083206|gb|EGC36665.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
Length = 422
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 230/350 (65%), Gaps = 5/350 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPI-MAEYWEKAEFPFHVIPKLGALRVAGGTI 105
DYYQ DDLL ++ +R K++ ++ E+ I + EY+EKAEFPF V+ KL L + G T+
Sbjct: 26 DYYQLDDLLNDNDKDIRYKIKSFVDNELNKININEYYEKAEFPFEVLEKLSKLNLVGSTM 85
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGC + T + E+A+ A +TF + ++ ML I CGSE+QK+KYLP LA
Sbjct: 86 KGYGCSNITPTSLGLIGMELAKSSADLATFYAILLNITMLGIYYCGSEQQKEKYLPDLAS 145
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ I +ALTEP GSDA+ L A KV+GGW+L G+KRWIGN+ FADV+V++ARN TN
Sbjct: 146 MKKIGAFALTEPNAGSDAAGLQCKAKKVDGGWLLTGEKRWIGNAPFADVIVVWARNVDTN 205
Query: 226 QINGYLVKK---DAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT-S 281
+I+G++V+ + G + I+NKI LR VQNG I F+ ++ RLP N F
Sbjct: 206 KIHGFIVEPKTVNQKGCRIETIKNKIALRSVQNGHIYFDNCFIREDQRLPLANDFNSGPG 265
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+ L ++RV+V W +GI+ Y+ C Y+K R+QFG PLA FQI Q +LV+M+GNIQA+
Sbjct: 266 RCLFLTRVVVGWIALGIASNAYEKCLEYVKNRQQFGQPLAQFQIIQDRLVKMMGNIQAIA 325
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
L+ R+ LYE+ +T G A L K++ +A+ARE V+L RE GGNGIL D
Sbjct: 326 LMCIRVSSLYEQSKLTLGQAGLLKAFASAKAREVVSLARECFGGNGILLD 375
>gi|389863505|ref|YP_006365745.1| acyl-CoA dehydrogenase [Modestobacter marinus]
gi|388485708|emb|CCH87254.1| Acyl-CoA dehydrogenase [Modestobacter marinus]
Length = 408
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 1/353 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
+D+Y +DLL E VR +VR+ E+E+ PI+ +YWE+AEFP +IPK+ L +AGG
Sbjct: 5 ATADFYALEDLLEPAEIEVRDRVRDFCEREVTPIINDYWERAEFPAELIPKMAELGIAGG 64
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
T++GYG PG S A + AE AR D S TF VHS LAM +IAL G EEQ+Q++LP +
Sbjct: 65 TVEGYGSPGMSAVAAGLVAAEWARADGSLGTFYGVHSFLAMQSIALLGDEEQRQRWLPEM 124
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A++ I + LTEP +GSDA AL+T+A + ++L G K+WIGN T AD+++I+AR
Sbjct: 125 ARMEKIGAFGLTEPEHGSDAVALSTSARRDGDEYVLNGAKKWIGNGTIADLVLIWARGED 184
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N + GY+V K + G T T++ K LR V +I L+ V VP E++L +SF+D S V
Sbjct: 185 GN-VGGYVVPKGSIGWTATRMTGKTALRAVWQAEITLEDVRVPAENKLANCHSFKDVSVV 243
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R VAW+ +GI+ YD+ ++ +R+QFG P+A +Q+ Q+KL +ML I +M L+
Sbjct: 244 LDRTRYTVAWRALGIAEAAYDLALQHTLQREQFGQPIAGYQLVQEKLARMLAEITSMRLL 303
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
WRL KL ++G MT AS+ K +AR VA R+L GG+GIL + +A+
Sbjct: 304 SWRLSKLADEGRMTAAMASMAKMNNCKKARAIVADARDLFGGDGILLEHHIAR 356
>gi|424853172|ref|ZP_18277549.1| acyl-CoA dehydrogenase [Rhodococcus opacus PD630]
gi|356665095|gb|EHI45177.1| acyl-CoA dehydrogenase [Rhodococcus opacus PD630]
Length = 420
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 229/368 (62%), Gaps = 2/368 (0%)
Query: 33 PQATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
P++ P S P SD+Y F+ +L+ E+A+ V + M E+ PI+ +W FPF +
Sbjct: 20 PRSKPMSPNPNTDTSDFYAFEQMLSDSERALLHSVHDFMTTEVDPIINTHWNAGTFPFEI 79
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+P L L +AG +G+GC G S + E+AR D+S +TF VH LAM +I LCG
Sbjct: 80 VPGLRKLGIAGVPYQGFGCAGRSYLLDGMIAMELARTDSSIATFNGVHGGLAMGSIYLCG 139
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNST 210
S+EQ++++LPS+AQ I + LTEP GS AS L TTA + W L GQK+WIGN+T
Sbjct: 140 SDEQRERFLPSMAQYEKIGSFGLTEPDVGSGASGGLTTTAERDGDTWTLNGQKKWIGNAT 199
Query: 211 FADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR 270
F D+ VI+A++ Q+ G++V+ +PG T K E KI LRIVQN I L V VP+ +R
Sbjct: 200 FGDLTVIWAKDVADGQVKGFVVENSSPGFTADKQERKIALRIVQNALIKLDNVQVPERNR 259
Query: 271 LPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
L G N+F+DT++VL ++R VAW +G + G Y+ +Y R+QFG P+ FQ+ Q L
Sbjct: 260 LRGANTFKDTAEVLRLTRAGVAWMAVGCARGAYENALKYACAREQFGRPIGGFQLVQDLL 319
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
V+MLGNI + + + RL +L ++G H+SL K++ T R RETV REL+GGNGIL
Sbjct: 320 VRMLGNITSSLALCARLSQLQDQGDAEDRHSSLAKAFCTVRMRETVGWARELMGGNGILL 379
Query: 391 DFLVAKVI 398
+ V + +
Sbjct: 380 EHNVGRFV 387
>gi|354615359|ref|ZP_09033139.1| Glutaryl-CoA dehydrogenase [Saccharomonospora paurometabolica YIM
90007]
gi|353220289|gb|EHB84747.1| Glutaryl-CoA dehydrogenase [Saccharomonospora paurometabolica YIM
90007]
Length = 391
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 226/353 (64%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y F++LL ++E+AV +VRE + E+API EYW +AEFP ++ L +AG
Sbjct: 8 DFYSFEELLDTDERAVLHRVREFLRSEVAPIANEYWARAEFPTELVKSYAELGIAGRAYP 67
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
P + + E+A DAS +TF VHS LAM +IA CG Q+ ++LP ++++
Sbjct: 68 DVQGPKPTSLLSGFLALEMAHTDASMATFFGVHSGLAMGSIADCGDAAQRTRWLPPMSRM 127
Query: 167 NTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ +ALTEP GSD A + TTA + W+L+G+KRWIGN+TFAD+LV++AR+
Sbjct: 128 ELLGAFALTEPEGGSDVAGGMRTTARRSGDEWVLDGRKRWIGNATFADLLVVWARDVDDG 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
Q+ G++V+KD PGLT TKIENKI LR VQN D++L VP+ +RL SF+DT+++L
Sbjct: 188 QVKGFVVEKDTPGLTATKIENKIALRSVQNADVVLDGCRVPEANRLQNARSFRDTARILR 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R VAWQ +G+ + Y++ RY ER+QFG P+AAFQ+ Q LV+MLGN+ + +
Sbjct: 248 ATRSGVAWQAVGVMLAAYEIALRYAGEREQFGRPIAAFQLVQDLLVRMLGNVTSSFGMVV 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L + G H++L K+ T+R RE V RELL GNGI+ D + + +
Sbjct: 308 RLAQLQDAGTYRDEHSALAKAHCTSRMREVVGWARELLAGNGIVLDHDIGRFV 360
>gi|403526483|ref|YP_006661370.1| acyl-coenzyme A dehydrogenase/oxidase family protein [Arthrobacter
sp. Rue61a]
gi|403228910|gb|AFR28332.1| acyl-coenzyme A dehydrogenase/oxidase family protein [Arthrobacter
sp. Rue61a]
Length = 404
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/365 (44%), Positives = 227/365 (62%), Gaps = 5/365 (1%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A A+ P D+Y F+++LT +EQ +VRE + +E+ PI + W + EFP +IPK
Sbjct: 13 AFDATNLPYADGDFYAFEEMLTGKEQDRLAEVREFLAREVKPIAVDCWNRGEFPMDLIPK 72
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG L + + G+S A + AE+ R DAS +TF+ VH L +I S+E
Sbjct: 73 LGELDLVSPVRR----QGYSNLFAGMLHAEVTRADASIATFMGVHDGLFTGSIEALASQE 128
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
QK +LP + L I + LTEP GSD A TTA + WIL G KRWIGN+TF+D
Sbjct: 129 QKDAWLPDIYSLKKIGAFGLTEPLGGSDVAGGTRTTAMRDGDNWILNGAKRWIGNATFSD 188
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+VI+A++ NQ+ +LV PG + +KIENKI LR VQN DI L V VPD +L
Sbjct: 189 WVVIYAKDVADNQVKAFLVDTKLPGYSASKIENKISLRTVQNADITLDNVVVPDFFKLAN 248
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
NSF+DT+KVL V+R+ VAWQ +G+ M +D+ Y R+QFG PLAAFQ+ Q +LVQ+
Sbjct: 249 GNSFRDTNKVLKVTRLAVAWQAVGLQMAAFDVARSYAVGRQQFGRPLAAFQLVQNQLVQI 308
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN A + + RL +L + GA ++L K++ TAR RE+VALGR +LGGNGI++D+
Sbjct: 309 LGNTVASLGMMVRLAQLEDAGAAKDEQSALAKAFTTARMRESVALGRSILGGNGIVTDYG 368
Query: 394 VAKVI 398
+AK+
Sbjct: 369 MAKIF 373
>gi|325962070|ref|YP_004239976.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468157|gb|ADX71842.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 402
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 232/365 (63%), Gaps = 16/365 (4%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
++D++ F+ LL +E+ ++RE + EIAP ++W KAEFP H++PKL AL ++
Sbjct: 12 SADFFAFESLLDQKERDKLAELREFLAAEIAPFAGDWWNKAEFPAHILPKLAALELSTPA 71
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+GY S A + IAE+ RVD S +TF LVH L + ++ GSE+QK++ L + A
Sbjct: 72 QRGY-----SHLFAGLVIAEMTRVDTSIATFFLVHHDLFVESLYAFGSEDQKRRLLDAAA 126
Query: 165 QLNTIACWALTEPAYGSD-ASALNTTATKV--------EGG--WILEGQKRWIGNSTFAD 213
L +ALTEP +GSD A + T A ++ +GG W+L G KRWIGN TF D
Sbjct: 127 NLEITGAFALTEPNHGSDVAGGMETGARRISSATGEADDGGTAWVLNGAKRWIGNGTFCD 186
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
++++AR+ T + G++V PG++ T+IENK LR VQN DILL V V + DR
Sbjct: 187 YMLVWARDETDGSVRGFIVDATLPGVSRTRIENKTALRTVQNADILLTDVRVAEADRFAS 246
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+NSF+DT ++L SR+MVAWQ +G + +D+ +Y ER QFG PLA FQ+ QQ+LV M
Sbjct: 247 INSFEDTKELLRGSRIMVAWQAVGQQLAAFDVARQYAVERHQFGRPLAHFQLIQQQLVTM 306
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN A + + L +L ++GA +L KS+I+AR RETVALGR +LGGNGIL+D+
Sbjct: 307 LGNAVASMAMMAGLARLQDEGAADMPQVALAKSYISARMRETVALGRSILGGNGILTDYR 366
Query: 394 VAKVI 398
+AK+
Sbjct: 367 MAKIF 371
>gi|332671133|ref|YP_004454141.1| glutaryl-CoA dehydrogenase [Cellulomonas fimi ATCC 484]
gi|332340171|gb|AEE46754.1| Glutaryl-CoA dehydrogenase [Cellulomonas fimi ATCC 484]
Length = 398
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 225/355 (63%), Gaps = 1/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P A+D+Y F + LT E ++R+ ME+E+ P+ +YW++AEFP +IP L + G
Sbjct: 11 PLAADFYGFQEALTPVEHDASARLRDFMEREVRPLALDYWDRAEFPHQIIPGLADCGMFG 70
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+S A E+ RVD S +TF+ V S L+M +IA+ GS EQ+ ++LP
Sbjct: 71 AMWPETMRFENSAVWRGWAALELGRVDPSTATFVGVQSGLSMSSIAIGGSPEQRAQWLPP 130
Query: 163 LAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+ + I + LTEP GSDAS L TTA + W+L G KRWIGN+TFADV+VI+AR+
Sbjct: 131 MGRGELIGAFGLTEPLSGSDASKGLRTTAERRGDTWVLNGAKRWIGNATFADVVVIWARD 190
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T Q+ G+LV++ PG T TKIE K LRIVQN DI L V V + DRLP ++SF++ +
Sbjct: 191 TADGQVKGFLVRRGTPGFTTTKIERKQALRIVQNADITLDGVEVDEADRLPNIHSFREVA 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
VL ++R VAWQ +G+++G Y+ RY+ ER+QFG PLA+FQ+ Q +L Q LGNI A I
Sbjct: 251 VVLRLTRAEVAWQAVGVAVGAYEATVRYVAEREQFGRPLASFQLVQDRLAQCLGNITASI 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + ++ + G + HA+L K + T R RETVA RELLGGNGI D VAK
Sbjct: 311 ALCLQASRMQDAGRLGDEHAALAKGYATTRMRETVAWCRELLGGNGIQLDHGVAK 365
>gi|379737912|ref|YP_005331418.1| acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
gi|378785719|emb|CCG05392.1| Acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
Length = 393
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 233/354 (65%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD+Y + LL +++A+ +VR M +++ P++ EYW +AEFP H+IP + L +AG +I
Sbjct: 9 SDFYDLEALLDDDDRALLHRVRTFMAEQVEPVINEYWTRAEFPHHLIPAMAELGIAGTSI 68
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S + E+++ D S STF+ VH LAM +I LCGSEEQK+++LP++A+
Sbjct: 69 QGYGCRGRSPLLDGMIAMELSKGDPSISTFMGVHGGLAMGSIYLCGSEEQKERWLPAMAR 128
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I + LTEP +GSD A L TT + W+L+G+K+WIGN+TFAD+++I+AR+ T
Sbjct: 129 MELIGAFGLTEPEHGSDVARGLQTTCRRDGDSWVLDGEKKWIGNATFADLVIIWARDVDT 188
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V++ PG T +E+KI LR+VQN I L V VP+E+RL +SF++T+ VL
Sbjct: 189 ERVLGFVVEQGTPGFTAVNLEDKIALRVVQNAHITLAGVRVPEENRLQEAHSFRETADVL 248
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
++R VAW +G S G Y+ RY R+QFG P+ FQ+ Q LV+MLGNI A +
Sbjct: 249 RMTRAGVAWSAVGCSRGAYEHALRYALGRRQFGQPIVEFQLVQDLLVRMLGNITASAAMC 308
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL L G MT ASL K++ T R RETV REL+GGNGIL + V + +
Sbjct: 309 ARLSHLQGAGRMTDEQASLAKAFCTMRMRETVGWARELMGGNGILLENHVGRYV 362
>gi|452951746|gb|EME57190.1| glutaryl-CoA dehydrogenase [Amycolatopsis decaplanina DSM 44594]
Length = 389
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 230/360 (63%), Gaps = 7/360 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y ++DLL EE+ + +K R+ M E+ P++ EYW K EFP ++ K L +AG
Sbjct: 3 ADFYAYEDLLPEEERKLLLKTRDFMRTEVKPLVNEYWAKGEFPHELVGKFRELGLAGLPY 62
Query: 106 KGYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+GYG P S + + E+ R D S +TF VH+ LAM +I G +EQ+ ++LPS+
Sbjct: 63 EGYGEHLPATSHLLSGMMAMEMTRTDPSVATFFGVHNGLAMYSIYSGGDQEQRDRWLPSM 122
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
A ++ I +A+TEP GSD A + TTA + WIL G K+WIGN+TFAD+++++AR+
Sbjct: 123 AAMDKIGAFAMTEPLGGSDVAGGMRTTARRDGDTWILNGAKKWIGNATFADLVIVWARDE 182
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N + G++V+KD+PG KIENK RIV+N +I L V VP+ RL G+NSF+D ++
Sbjct: 183 EDNNVKGFVVEKDSPGFVPVKIENKFAFRIVENAEITLTDVRVPEAHRLQGINSFRDVAE 242
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+L +R VAWQ +G+ +G Y++ Y KERKQFG P+A FQ+ Q LV+ LGNI A
Sbjct: 243 ILRATRGGVAWQALGVMIGAYELALDYAKERKQFGRPIARFQLVQDLLVKSLGNITASWG 302
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFF 402
+ +L +L + G H+SL K+++T+R RE VA GRE+ GGNGI+ D IM FF
Sbjct: 303 MLVQLARLQDAGIFKDEHSSLAKAFVTSRMREVVAWGREIFGGNGIVLD----NDIMRFF 358
>gi|163838941|ref|YP_001623346.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162952417|gb|ABY21932.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 398
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 234/370 (63%), Gaps = 9/370 (2%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P A PA+ P DY+ F++LLT EE++ +++RE + KEI P+ + W+K EFPF VI
Sbjct: 3 PMARPANTNP----DYFGFEELLTDEERSELVRIREFLTKEIKPLTQDAWDKTEFPFEVI 58
Query: 93 PKLGALRVAGGTIKGYGCPG---HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
K L +A G+ G ++ ++I E+ R+D S + F VH+ LAM +I
Sbjct: 59 EKFAELNLADDQFPGFASAGKQRRALMTGFLSI-ELNRMDPSLAVFSGVHTGLAMGSIFG 117
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGN 208
G EEQ+Q++LP + I +ALTEP GSD S + TTA + WI+ G KRWIGN
Sbjct: 118 GGDEEQRQRWLPDMIAWKKIGAFALTEPEGGSDVSGGMRTTARREGDTWIINGAKRWIGN 177
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
TFAD+ +++AR+ NQ+ G++V+KD PG + KIE KI L VQN D+ V VP+
Sbjct: 178 GTFADLAIVWARDEADNQVKGFVVEKDMPGFSSAKIEGKIALCTVQNADLSFDNVRVPEA 237
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+RL +NSF+DT++VL +R VAWQ +G+S+ Y++ Y R QFG P+A+FQ+ Q
Sbjct: 238 NRLQNINSFRDTAEVLRATRGGVAWQALGVSIRAYELARDYATTRVQFGKPIASFQMIQD 297
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
LV+MLGNI AM + RL +L E+ TP A+L K++ T++ RETVA GR+L GGNGI
Sbjct: 298 LLVKMLGNISAMFGMVTRLAQLSEELRDTPEQAALAKAFCTSKMRETVAYGRDLFGGNGI 357
Query: 389 LSDFLVAKVI 398
+ D+ +AK+
Sbjct: 358 VLDYEIAKLF 367
>gi|134101910|ref|YP_001107571.1| glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
gi|291009207|ref|ZP_06567180.1| putative glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea
NRRL 2338]
gi|133914533|emb|CAM04646.1| putative glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea
NRRL 2338]
Length = 393
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 225/353 (63%), Gaps = 4/353 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D++ F +LL+ E+A ++RE +E+EI PI E W AEFP I K L VAG
Sbjct: 9 DFFGFAELLSESERAELAEIREYLEREIKPIANEAWANAEFPAEAIEKFAKLGVAGVQYP 68
Query: 107 GYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG P ++ +++ E+ RVD S + F VHS LAM +I G +EQ+ +++P +
Sbjct: 69 DYGDGKPRSALFTGFLSV-ELNRVDPSLAVFSGVHSGLAMGSIHGGGDQEQRDRWMPDMV 127
Query: 165 QLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
+N I +ALTEP GSD A + TTA + W+L+G KRWIGN TFAD++V++AR+
Sbjct: 128 AMNKIGAFALTEPEGGSDVAGGMRTTARREGDEWVLDGAKRWIGNGTFADLVVVWARDEA 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G++V+K PG T TKIE KI LR VQN DI+L V VP+ +RL G+NSF+DT++V
Sbjct: 188 DGNVKGFVVEKGTPGFTATKIEGKIALRTVQNADIVLDGVRVPEANRLQGINSFRDTARV 247
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
LA +R VAWQ +G++M Y++ Y ER QFG P+A+FQ+ Q LV+MLGN+ AM V
Sbjct: 248 LAKTRGGVAWQAVGVAMRAYELAREYAVERVQFGKPIASFQMIQDLLVKMLGNVTAMFGV 307
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L E+G A+L K++ T R RE V+ REL GGNGI+ D +AK
Sbjct: 308 VVRLAQLTEQGTAGADQAALAKAFTTTRMREVVSWARELFGGNGIVLDHEIAK 360
>gi|359778929|ref|ZP_09282185.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359303796|dbj|GAB16014.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 396
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 223/365 (61%), Gaps = 5/365 (1%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
AT + P D++ F+ LL+S+EQ +VR + +E+ PI + W + EFP ++PK
Sbjct: 5 ATDINSLPYADGDFFSFEQLLSSKEQDRLAEVRSFLAREVKPIAVDCWNRGEFPLDLVPK 64
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
L L + + GHS A I AE+ R D S +TF+ VH L +I S E
Sbjct: 65 LAELDLVSPVRR----QGHSNLFAGIVHAEVTRADTSIATFMGVHDGLFTGSIEALASRE 120
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
Q+ +LP + L I + LTEP GSD A TTA + WIL G KRWIGN+TF+D
Sbjct: 121 QQDAWLPDIYSLRKIGAFGLTEPLGGSDVAGGTRTTARRDGDRWILNGAKRWIGNATFSD 180
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+V++AR+ NQ+ +LV PG + TKIENKI LR VQN DI L+ V VPD +L
Sbjct: 181 WVVVYARDVADNQVKAFLVDTGLPGFSATKIENKISLRTVQNADITLENVAVPDFFKLAN 240
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
NSF+DT+KVL V+R+ VAWQ +G + +D+ RY ER QFG PLA+FQ+ Q +LVQ+
Sbjct: 241 ANSFRDTNKVLKVTRLAVAWQAVGQQLAAFDVARRYAVERHQFGRPLASFQLVQSQLVQI 300
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN + + + RL +L + G ++L K++ TAR RE+VA+GR LLGGNGI++DF
Sbjct: 301 LGNAVSSMGMMVRLSQLEDAGQAKDEQSALAKAFTTARMRESVAIGRSLLGGNGIVTDFE 360
Query: 394 VAKVI 398
+AK+
Sbjct: 361 MAKIF 365
>gi|300788311|ref|YP_003768602.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|384151747|ref|YP_005534563.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|399540194|ref|YP_006552856.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|299797825|gb|ADJ48200.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|340529901|gb|AEK45106.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|398320964|gb|AFO79911.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length = 388
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y D L E++ + ++R ++ E+AP+ +W + FP H++ LG L V G +
Sbjct: 4 TDFYALADDLPDEDRDLLTRLRGFLDSELAPVANWHWARERFPHHLVEPLGKLDVGGLSY 63
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYG PG + ++AR D S +TF VH+ LAM +I LCGSEEQK K+LP + +
Sbjct: 64 TGYGLPGRTSLLDGFVTLDLARTDPSFATFFGVHTGLAMGSIYLCGSEEQKAKWLPPMHR 123
Query: 166 LNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I + LTEP GS AS L TTA + W+L G+K+WIGN+TFADV+V++A++
Sbjct: 124 FEKIGAFGLTEPDVGSAASRGLKTTARREGDEWVLNGEKKWIGNATFADVVVVWAKDVED 183
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
Q+ G+L+++ PG T TKIE KI LR VQN ILL+ VP+ +RL N+F DT+ VL
Sbjct: 184 GQVKGFLLEQGTPGFTPTKIEGKIALRSVQNAHILLEDCRVPEANRLQHANTFADTAAVL 243
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
++R VAWQ +G S+G Y Y KER+QFG P+ FQ+ Q LV+MLGNI A + +
Sbjct: 244 RMTRTSVAWQAVGCSIGAYQRALAYAKEREQFGRPIGGFQLVQDLLVKMLGNITASLCLV 303
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+L +L + MT ASL K++ T + RETV + REL+GGNGIL +F V + +
Sbjct: 304 AQLSRLQDAQKMTEEQASLAKAFCTTKMRETVGMARELMGGNGILLEFDVGRFV 357
>gi|221488678|gb|EEE26892.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
Length = 454
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 238/356 (66%), Gaps = 1/356 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P A D+ FD LLT E+ +R +V+ + + + + +E+A F ++ A
Sbjct: 66 PIYALDFMHFDSLLTPRERTLRGRVQNIVSRYVEHAVLPLYEEAAFDSELVEICKKFGPA 125
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G IKGYGCPG + T A + E+ARVDAS STF LVH LAM +IA+ G++EQK +LP
Sbjct: 126 GLQIKGYGCPGLTHTEAILMAMEMARVDASFSTFYLVHCGLAMQSIAVAGTQEQKAMWLP 185
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+++L I + LTEP +GSDA+ L T+A KVEGGWIL GQKRWIGN+TF+D++V++AR+
Sbjct: 186 KMSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGGWILNGQKRWIGNATFSDIVVVWARD 245
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ +I G++V+KD PG + TKIENK+ LRIVQN DI+LK FVPD RL T+
Sbjct: 246 VHSEKILGFIVEKDFPGFSATKIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGFSGATA 305
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VL SR +VA + +G+ +G YD +Y ERKQFG LA FQ+ Q++L+++LG +Q ++
Sbjct: 306 QVLESSRAVVAAECVGVLLGAYDNALKYCTERKQFGRELATFQLVQERLMRVLGMLQGVL 365
Query: 342 LVGWRLCKLYEKGA-MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ RL +L ++G H +L K+ + ARE +AL RE+LGGNGI++DF VAK
Sbjct: 366 LLVLRLGRLMDEGKPHMMAHIALAKATCSRVAREGIALCREVLGGNGIVTDFGVAK 421
>gi|237837527|ref|XP_002368061.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
gi|211965725|gb|EEB00921.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
gi|221509176|gb|EEE34745.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
Length = 454
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 237/356 (66%), Gaps = 1/356 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P A D+ FD LLT E+ +R +V+ + + + + +E A F ++ A
Sbjct: 66 PIYALDFMHFDSLLTPRERTLRGRVQNIVSRYVEHAVLPLYEAAAFDSELVEICKKFGPA 125
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G IKGYGCPG + T A + E+ARVDAS STF LVH LAM +IA+ G++EQK +LP
Sbjct: 126 GLQIKGYGCPGLTHTEAILMAVEMARVDASFSTFYLVHCGLAMQSIAVAGTQEQKAMWLP 185
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+++L I + LTEP +GSDA+ L T+A KVEGGWIL GQKRWIGN+TF+D++V++AR+
Sbjct: 186 KMSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGGWILNGQKRWIGNATFSDIVVVWARD 245
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ +I G++V+KD PG + TKIENK+ LRIVQN DI+LK FVPD RL T+
Sbjct: 246 VHSEKILGFIVEKDFPGFSATKIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGFSGATA 305
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VL SR +VA + +G+ +G YD +Y ERKQFG LA FQ+ Q++L+++LG +Q ++
Sbjct: 306 QVLESSRAVVAAECVGVLLGAYDNALKYCTERKQFGRELATFQLVQERLMRVLGMLQGVL 365
Query: 342 LVGWRLCKLYEKGA-MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ RL +L ++G H +L K+ + ARE +AL RE+LGGNGI++DF VAK
Sbjct: 366 LLVLRLGRLMDEGKPHMMAHIALAKATCSRVAREGIALCREVLGGNGIVTDFGVAK 421
>gi|220912152|ref|YP_002487461.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|219859030|gb|ACL39372.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
chlorophenolicus A6]
Length = 396
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/367 (43%), Positives = 229/367 (62%), Gaps = 6/367 (1%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P A P + P D+Y F+ LL+++E+ +VR+ + +E+ PI A+ W + EFP +I
Sbjct: 4 PAADP-RELPYADGDFYAFEQLLSAKERDRLAEVRDFLAREVRPIAADCWNRGEFPMDLI 62
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
PKL + + + GHS A + AE+ R DAS +TF+ VH L +I S
Sbjct: 63 PKLAEVDLVSPVRR----QGHSNLFAGLVHAELTRADASIATFLGVHDGLFAGSIEALAS 118
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTF 211
EQ++++LP + L I + LTEP GSD A TTA + WIL G KRWIGN+TF
Sbjct: 119 REQQEEWLPDIYALKKIGAFGLTEPLGGSDVAGGTRTTARRDGDTWILNGAKRWIGNATF 178
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
+D +VI+A++ NQ+ G+LV PG + TKIENKI LR VQN DI+L+ V VPD RL
Sbjct: 179 SDWVVIYAKDVADNQVKGFLVDTALPGFSATKIENKISLRTVQNADIVLEDVVVPDFFRL 238
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
NSF+D +KVL V+R+ VAWQ +G + +D+ Y ER+QFG PLA+FQ+ Q +LV
Sbjct: 239 ANANSFRDVNKVLKVTRLAVAWQAVGQQLAAFDVARSYAVEREQFGRPLASFQLIQNQLV 298
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
Q+LGN + + + RL +L + G ++L K++ T R RE+VALGR +LGGNGI++D
Sbjct: 299 QILGNAVSSMGMMVRLAQLEDDGLAKDEQSALAKAFTTERMRESVALGRSILGGNGIVTD 358
Query: 392 FLVAKVI 398
+ +AK+
Sbjct: 359 YGMAKIF 365
>gi|116669926|ref|YP_830859.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
FB24]
gi|116610035|gb|ABK02759.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
Length = 396
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 225/365 (61%), Gaps = 5/365 (1%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A + P D++ F+ LL+ +E+ +VR+ +++E+ PI + W +AEFP +IPK
Sbjct: 5 AIDINNLPYADGDFFAFEQLLSGKERDRLAEVRDFLDREVKPIAVDCWNRAEFPMDLIPK 64
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
L + + + G+S A I AE R DAS +TF+ VH L +I S+E
Sbjct: 65 LAEIDLVSPVRR----QGYSNLFAGILHAEATRADASIATFLGVHDGLFTGSIEALASQE 120
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
Q++ +LP + L I + LTEP GSD A TTA + WIL G KRWIGN+TF+D
Sbjct: 121 QQEAWLPDIYSLKRIGAFGLTEPLGGSDVAGGTRTTARRKGDSWILNGAKRWIGNATFSD 180
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+VI+AR+ NQ+ G+LV G + TKIENKI LR VQN DI L V VPD +L
Sbjct: 181 WVVIYARDEADNQVKGFLVDTKTEGYSATKIENKISLRTVQNADITLDNVVVPDFFKLAN 240
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
NSF+DT+KVL V+R+ VAWQ +G + +D+ RY ER QFG P+A+FQ+ Q +LVQ+
Sbjct: 241 ANSFRDTNKVLKVTRLAVAWQAVGQQLAAFDVARRYAVERSQFGRPIASFQLVQNQLVQI 300
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN + + + RL +L + G ++L K++ TAR RE+VA+GR LLGGNGI++DF
Sbjct: 301 LGNAVSSMGMMVRLSQLEDAGEAKDEQSALAKAFTTARMRESVAIGRSLLGGNGIVTDFE 360
Query: 394 VAKVI 398
+AK+
Sbjct: 361 MAKIF 365
>gi|325962757|ref|YP_004240663.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468844|gb|ADX72529.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 396
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 220/359 (61%), Gaps = 5/359 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P D+Y F+ LLT +EQ +VR+ + +E+ PI + W + EFP +IPKL + +
Sbjct: 11 LPYADGDFYAFEQLLTGKEQDRLAEVRDFLAREVKPIATDCWNRGEFPMDLIPKLADIDL 70
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
+ GHS A + AE+ R DAS STF+ VH L +I SEEQK+ +L
Sbjct: 71 VSPVRR----QGHSNLFAGLLHAEVTRADASISTFMGVHDGLFTGSIEALASEEQKEAWL 126
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFA 219
P + + I + LTEP GSD + T + EG WIL G+KRWIGN+TF+D +VI+A
Sbjct: 127 PDIYAMKKIGAFGLTEPLGGSDVAGGTRTTARREGDTWILNGEKRWIGNATFSDWVVIYA 186
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
++ NQ+ G+LV G + KIENK LR VQN DI L+ V VPD +L NSF+D
Sbjct: 187 KDVDDNQVKGFLVDTALDGFSAVKIENKTALRTVQNADITLRNVAVPDFQKLAHANSFRD 246
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+KVL V+R+ VAWQ +G + +D+ RY ER QFG PLA+FQ+ Q +LVQ+LGN +
Sbjct: 247 VNKVLKVTRLGVAWQAVGQQLAAFDVARRYAVERHQFGRPLASFQLVQNQLVQILGNAVS 306
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ + RL +L + G ++L K++ T R RE+VALGR +LGGNGI++DF +AK+
Sbjct: 307 SMGMMVRLSQLEDAGQAKDEQSALAKAFTTTRMRESVALGRNILGGNGIVTDFGMAKIF 365
>gi|284990335|ref|YP_003408889.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
gi|284063580|gb|ADB74518.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
Length = 395
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/350 (45%), Positives = 222/350 (63%), Gaps = 1/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y ++LL EE +R +VR EKE+ P + +YWE+AEFPF ++PKL L +AGGTI+
Sbjct: 7 DFYDLEELLEPEEIEIRDRVRAFCEKEVTPRINDYWERAEFPFELVPKLAELGIAGGTIE 66
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S A + AE+AR D S TF VHS LAM +IA+ G EEQ++++LP++A+L
Sbjct: 67 GYGCPGMSNVSAGLVAAELARADGSVGTFNGVHSFLAMQSIAMLGDEEQRERWLPAMARL 126
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ + LTEPA+GSDA L T + ++L GQK+WIGN T AD ++I+AR
Sbjct: 127 EKVGAFGLTEPAHGSDAVGLETFVRRDGDSYVLNGQKKWIGNGTIADHVLIWARG-EDGA 185
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ GY+V K PG + K LR V +I L V VP E+RL +SF+D S+VL
Sbjct: 186 VGGYVVDKGTPGYEARVMTGKTALRAVWQAEITLSDVRVPAENRLANCHSFKDVSQVLDR 245
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R VAW+ +G++ Y++ + R+QFG P+A +Q+ Q KL +ML I AM L+ WR
Sbjct: 246 TRYTVAWRALGLATASYELALAHALRREQFGQPIAGYQLVQDKLARMLAEITAMQLMCWR 305
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L KL + G MT ASL K A+AR VA R++LGG+GIL D VA+
Sbjct: 306 LSKLADAGRMTAAMASLAKMNHAAKARAIVADARDILGGDGILIDHHVAR 355
>gi|451340186|ref|ZP_21910687.1| Glutaryl-CoA dehydrogenase [Amycolatopsis azurea DSM 43854]
gi|449417059|gb|EMD22747.1| Glutaryl-CoA dehydrogenase [Amycolatopsis azurea DSM 43854]
Length = 395
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 230/367 (62%), Gaps = 7/367 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S+ +D+Y ++ LL EE+ + +K R+ M E+ P++ E W K EFP ++ K
Sbjct: 2 SREDQLIADFYDYEALLPDEERKLLLKARDFMRTEVKPLVNENWAKGEFPHELVGKFREQ 61
Query: 99 RVAGGTIKGYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
+AG +GYG P S + + E+ R D S +TF VH+ LAM +I G +EQ+
Sbjct: 62 GLAGLPYEGYGEHLPATSHLLSGMMAMEMTRTDPSVATFFGVHNGLAMYSIYSGGDQEQR 121
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
++LPS+A ++ I +A+TEP GSD A + TTA + WIL G K+WIGN+TFAD++
Sbjct: 122 DRWLPSMAAMDKIGAFAMTEPLGGSDVAGGMRTTARREGDTWILNGAKKWIGNATFADLV 181
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
+++AR+ N + G++V+KD+PG KIENK RIV+N +I L V VP+ +RL G++
Sbjct: 182 IVWARDEDDNNVKGFVVEKDSPGFVPVKIENKFAFRIVENAEITLTDVQVPEANRLQGID 241
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF+D +++L +R VAWQ +G+ +G Y++ Y KERKQFG P+A FQ+ Q LV+ LG
Sbjct: 242 SFRDVAEILRATRGGVAWQALGVMIGAYELALDYAKERKQFGRPIARFQLVQDLLVKSLG 301
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
NI A + +L +L + G H+SL K+++T+R RE VA GRE+ GGNGI+ D
Sbjct: 302 NITASWGMLVQLARLQDAGIFKDEHSSLAKAFVTSRMREVVAWGREIFGGNGIVLD---- 357
Query: 396 KVIMLFF 402
IM FF
Sbjct: 358 NDIMRFF 364
>gi|29827260|ref|NP_821894.1| glutaryl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29604358|dbj|BAC68429.1| putative glutaryl-CoA dehydrogenase [Streptomyces avermitilis
MA-4680]
Length = 413
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 223/354 (62%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ +++LL+ E+ VRE + ++API+ +YW +AEFPF ++ G L +
Sbjct: 27 ADFFAYEELLSDGEREQLESVREFLRTQVAPIVDDYWARAEFPFQLVEGFGRLGLMDWAD 86
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
S A E+A VDAS +TF VH+ LAM TI CGS+EQK+++LP++++
Sbjct: 87 PDSPESRPSNLLAGFLALELAHVDASVATFAGVHTGLAMGTILTCGSDEQKRRWLPAMSR 146
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I + LTEP GSD A L TTA + WIL+G KRWIGN+TFAD++VI+AR+ T
Sbjct: 147 FEKIGAFGLTEPHGGSDVAGGLQTTARRDGDTWILDGAKRWIGNATFADLVVIWARDVET 206
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V+KD PG T TKIENK+ LRIVQN DI+L VP+ +RL +SF+DT+K+L
Sbjct: 207 RHVLGFVVEKDTPGFTATKIENKMALRIVQNADIVLDGCRVPEANRLQNAHSFKDTAKIL 266
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R VAWQ +G+ Y++ +Y KER+QFG P+ FQ+ Q LV+MLGN A +
Sbjct: 267 RQTRSGVAWQAVGVMFAAYEIALQYTKEREQFGRPIGGFQLVQDLLVKMLGNATASCGMM 326
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L + G ++L K++ T R RE V RELL GNGIL D+ V + +
Sbjct: 327 TRLAQLQDAGVFRDEQSALAKAYCTVRMRENVGWARELLAGNGILLDYKVGRFV 380
>gi|359776638|ref|ZP_09279945.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359306177|dbj|GAB13774.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 404
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 232/378 (61%), Gaps = 22/378 (5%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
PA P A D++ ++ LL++ E+ ++RE + EIAP ++W KAEFP H++PKL
Sbjct: 2 PAVDTLPAA-DFFGYESLLSAAERRKLGELREFLAAEIAPFAGDWWNKAEFPAHILPKLA 60
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
AL ++ +GY S A + IAE+ RVD S +TF LVH L + ++ GSE+Q+
Sbjct: 61 ALELSTPAQRGY-----SHLFAGLVIAEMTRVDTSIATFFLVHHDLFVESLYRFGSEDQR 115
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEG----------GWILEGQKRW 205
+YL + L T +ALTEP +GSD A + T A ++ G W+L G KRW
Sbjct: 116 SRYLDDASNLRTTGAFALTEPDHGSDVAGGMETRARRISGRTGEADAGGDSWVLNGAKRW 175
Query: 206 IGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFV 265
IGN TF D ++++AR+ + G++V PG+ ++IENKI LR VQN DI+ + V V
Sbjct: 176 IGNGTFCDFMLVWARDEADGAVRGFIVDASLPGVGRSRIENKIALRTVQNADIVFEDVRV 235
Query: 266 PDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQI 325
+ DR G+ SF DT+++L SR+MVAWQ +G + +D+ +Y ER+QFG PLA FQ+
Sbjct: 236 AEADRFAGIGSFDDTNELLRGSRIMVAWQAVGQQLAAFDVARQYAVERQQFGRPLARFQL 295
Query: 326 NQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA-----SLGKSWITARARETVALGR 380
QQ+LV MLGN A + + R+ +L E + A +L KS+ +AR RETVA+GR
Sbjct: 296 IQQQLVSMLGNAMASMGMMVRIAQLQEHSQLQEQGAGMAQVALAKSYTSARMRETVAMGR 355
Query: 381 ELLGGNGILSDFLVAKVI 398
+LGGNGI++D+ +AK+
Sbjct: 356 SILGGNGIVTDYRMAKIF 373
>gi|258651115|ref|YP_003200271.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258554340|gb|ACV77282.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
44233]
Length = 409
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 222/357 (62%), Gaps = 5/357 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+DYY DLL+ EE+ +R +VR ++ ++ PI+ +YWE+AEFPF ++PKL L + GG
Sbjct: 20 GTDYYLLHDLLSDEEREIRDRVRSFVDADVLPIINDYWERAEFPFELVPKLAKLGIVGGA 79
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGCPG S + E++R D S +TFI V S LAM +I + GS EQKQ++LP LA
Sbjct: 80 IQGYGCPGLSRLAQGMVTLELSRGDGSVNTFIGVQSGLAMGSINMLGSPEQKQRWLPGLA 139
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
L+ I +ALTEP +GSD+ AL T+A + W+L G KRWIGN + V++++AR+
Sbjct: 140 TLDKIGAFALTEPQHGSDSVALETSARRDGDHWVLNGSKRWIGNGSIGHVVIVWARDEAD 199
Query: 225 NQINGYLVKKD-----APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
++ G++V+KD G T I KIG R + DI+L V VP+ +RL N F+D
Sbjct: 200 GKVKGFVVEKDDQGAYPEGYTAELITGKIGKRAIWQPDIVLDNVRVPEANRLAHANGFRD 259
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
S+VL +R +W+ G ++ Y+ Y R+QF P+AA+Q+ Q KL ML A
Sbjct: 260 VSRVLTATRGGASWEAAGHAVAAYEAALTYATHRQQFSKPIAAYQLVQNKLATMLAETTA 319
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ L+ +R+ +L E+G +T AS+ K + + AR A R++LGGNG+L DF VA+
Sbjct: 320 IQLMCFRMAQLQEQGKLTGPMASMAKMYTASTARSICAEARDILGGNGLLLDFHVAR 376
>gi|94985323|ref|YP_604687.1| acyl-CoA dehydrogenase [Deinococcus geothermalis DSM 11300]
gi|94555604|gb|ABF45518.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
11300]
Length = 466
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 224/374 (59%), Gaps = 9/374 (2%)
Query: 26 LDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA 85
LD S P+A P P Y Q DDL T E+Q VR++VR ME+ +APIM EYW +
Sbjct: 66 LDRSTRPPRALPE----PDGDFYRQLDDL-TPEQQDVRLRVRRFMEERVAPIMNEYWSRD 120
Query: 86 EFPFHVIPKLGALRVAGGTIKGYGC--PGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
EFP H+IP+L L + G P ++ I + E R+D S + F VH+ LA
Sbjct: 121 EFPRHLIPELRQLDLPRRVWNEDGTRQPDATLIEGLITL-EACRIDVSTAVFFGVHTGLA 179
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQ 202
+IAL GS EQK ++LP + L TI + LTEP GS S + TT + WIL G+
Sbjct: 180 FASIALGGSAEQKAEWLPKMLDLETIGAFGLTEPEGGSQVSQGMRTTCQRDGDHWILNGE 239
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
K+WIGNSTF+D V++AR+ T ++ G++V+ PG V KI KI LR+V+NG I L
Sbjct: 240 KKWIGNSTFSDFTVVWARDVDTGEVRGFIVRAGTPGYDVRKIAGKIALRMVENGHITLTH 299
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
VPD DRL ++ T++VL ++R VAWQ +G ++G Y++ +Y + R+QFG P+ A
Sbjct: 300 CRVPDTDRLQETRGWRTTAEVLRLTRAGVAWQGVGCALGAYELALKYAQTREQFGKPIGA 359
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
FQ+ Q LV MLGN+ + + RL ++ + G M HA+L K AR RETVAL RE
Sbjct: 360 FQLIQNHLVHMLGNVTTTLSLCLRLSQMADAGQMRDEHAALAKVVTAARCRETVALARET 419
Query: 383 LGGNGILSDFLVAK 396
GGNGIL D LVAK
Sbjct: 420 FGGNGILLDHLVAK 433
>gi|385680982|ref|ZP_10054910.1| glutaryl-CoA dehydrogenase [Amycolatopsis sp. ATCC 39116]
Length = 389
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 230/357 (64%), Gaps = 7/357 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
++D+Y ++DLL+ EE+ +K R+ M E+ P++ YW + EFP +I K L +AG
Sbjct: 2 SADFYGYEDLLSEEERKTLLKARDFMRTEVKPLVNSYWARGEFPRELIGKFRELGLAGVA 61
Query: 105 IKGYGCP----GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
+GYG P H +TG + AE +RVD S +TF VH+ LAM ++ G +EQ+ ++L
Sbjct: 62 YEGYGDPLPRGSHLLTG--MLAAEYSRVDPSVATFFGVHNGLAMYSVYAGGDQEQRDRWL 119
Query: 161 PSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P++A ++ I +A+TEP GSD A + TTA + W+L G K+WIGN+TFAD++V++A
Sbjct: 120 PAMAAMDKIGAFAMTEPLGGSDVAGGMRTTAKREGDTWVLNGAKQWIGNATFADLVVVWA 179
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ N++ G++V+ A G KIENK+ RIV+N +I L V VP+ +RL + SF+D
Sbjct: 180 RDVDDNRVKGFVVETPADGFVPVKIENKVAFRIVENAEITLSDVRVPEANRLRNIRSFRD 239
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+++L +R VAWQ +G+ +G Y+ Y KERKQFG P+A FQ+ Q LV+ LGNI A
Sbjct: 240 VAEILRATRGGVAWQALGVMIGAYEAALAYAKERKQFGKPIAGFQLVQDLLVKSLGNITA 299
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L + G +SL K+++TAR RE VA RELLGGNGI+ D+ VA+
Sbjct: 300 SWGMLVQLARLQDAGIFRDEQSSLAKAFVTARMREVVAWCRELLGGNGIVLDYDVAR 356
>gi|117164580|emb|CAJ88126.1| putative glutaryl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
23877]
Length = 397
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 227/357 (63%), Gaps = 7/357 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A+D+Y F+ L EE+ + + RE M E+ P++ ++W FP +I + + G
Sbjct: 10 AADFYDFESALPEEERKILARTREFMRDEVRPLVTDHWADGTFPMELIARFRESGLVGLP 69
Query: 105 IKGYGCPG----HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
+GYG PG H +TG + E++RVDAS +TF VH+ LAM ++ G EEQ++++L
Sbjct: 70 YEGYGEPGPAASHLLTG--MMAMEMSRVDASVATFFGVHNGLAMYSVQAGGDEEQRERWL 127
Query: 161 PSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P +A++ T+ +ALTEP GSD A+ + TTA + W+++G KRWIGN+TFAD +V++A
Sbjct: 128 PGMARMETVGAFALTEPLDGSDIAAGMRTTARREGDTWVIDGAKRWIGNATFADHVVVWA 187
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ +Q+ G++V + PG T I +K LRIVQN DI L V VP+ DRL V+SF+D
Sbjct: 188 RDVEDDQVKGFVVGRGTPGFTAEPIAHKTSLRIVQNADITLTGVRVPETDRLQRVSSFRD 247
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+++L +R VAWQ +G+ +G Y++ RY ER+QFG PLA FQ+ Q LV+ LGNI +
Sbjct: 248 VAEILRATRSGVAWQALGVMIGAYELALRYATERQQFGRPLAGFQLVQDLLVKSLGNITS 307
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L ++ + G H+SL K+ +TAR RE VA RE+ GGNGI+ + VA+
Sbjct: 308 SWGMLLQLARMQDAGVFRDEHSSLAKAHVTARMREVVAWAREIFGGNGIVLEHDVAR 364
>gi|146161808|ref|XP_001033489.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
[Tetrahymena thermophila]
gi|146142823|gb|EAR85826.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 411
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 220/357 (61%), Gaps = 2/357 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
+ + DYY+F D+++ E+ R+K+R +EKE+ P + +Y E+AEFP IPK+ +V
Sbjct: 17 YVDSSFDYYRFTDIISKEDNEFRLKLRAWLEKEVQPTINDYVERAEFPEEYIPKIRETQV 76
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
+ G S+ + AE++R+DA TF +V + L TI G+E Q+QKY+
Sbjct: 77 FHYLVDQPFGKGKSILTQGVMAAELSRIDAGLGTFAIVQAGLLTATIDQLGNENQRQKYV 136
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P L L W LTE +GSDA++L TT K EGGW+L G K WIGN D++V++AR
Sbjct: 137 PLLRDLQLTGGWGLTENKFGSDATSLQTTVQKTEGGWLLNGDKTWIGNGN-RDIMVVWAR 195
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD- 279
N N+I G++V A G+ +++K+ LRIVQN I VF+P+E+ L FQ
Sbjct: 196 NVENNKIQGFIVDLKAKGVRSEVLKHKLALRIVQNCQITFTNVFIPEENMLSKATDFQKG 255
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
T+K+L SR+MV W GI MGVYD +Y+ RKQFG P+++FQ+ Q+KL +++ N QA
Sbjct: 256 TAKILLHSRLMVCWLVAGICMGVYDNVIKYISNRKQFGVPISSFQLQQEKLARIMSNTQA 315
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++L R+ ++Y+ +T G +L K++ T RARE LGRE+LGGNGI+ D V K
Sbjct: 316 ILLFAHRISQMYDNKKITLGQVALAKAFCTERAREVARLGREMLGGNGIIFDNYVMK 372
>gi|444306126|ref|ZP_21141898.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
gi|443481584|gb|ELT44507.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
Length = 396
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 226/368 (61%), Gaps = 8/368 (2%)
Query: 35 ATPASK---FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
+TPA+ P D++ F+ LLT++EQ +VR+ + +E+ PI ++W + EFP +
Sbjct: 2 STPAADPFDLPYADGDFFAFEQLLTAKEQDRLAEVRDFLAREVRPIAVDFWNRGEFPMDL 61
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
IPKL + + ++ GC S A + AE+ R DAS +TF+ VH L +I
Sbjct: 62 IPKLAEIDLVS-PVRRQGC---SNLFAGLLHAEVTRADASIATFMGVHDGLFTGSIETLA 117
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNST 210
S+EQK +LP + + I + LTEP GSD A TTA + G WIL G KRWIGN+T
Sbjct: 118 SQEQKDAWLPDIYAMKKIGAFGLTEPLGGSDVAGGTRTTARRDGGSWILNGAKRWIGNAT 177
Query: 211 FADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR 270
F+D +V++AR+ NQ+ G+LV PG + KIENKI LR VQN DI L V VPD +
Sbjct: 178 FSDWVVVYARDVDDNQVKGFLVDTSLPGFSAEKIENKISLRTVQNADITLDNVVVPDFFK 237
Query: 271 LPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
L NSF+D +KVL V+R+ VAWQ +G + +D+ RY ER QFG PLA FQ+ Q +L
Sbjct: 238 LEHANSFRDVNKVLKVTRLGVAWQAVGQQLAAFDVARRYAVERHQFGRPLATFQLVQSQL 297
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
V +LGN + + + RL +L + G ++L K++ T R R++VA+GR +LGGNGI++
Sbjct: 298 VTILGNAVSSMGMMVRLSQLEDAGMARDEQSALAKAFTTERMRDSVAIGRSILGGNGIVT 357
Query: 391 DFLVAKVI 398
D+ +AK+
Sbjct: 358 DYGMAKIF 365
>gi|433646468|ref|YP_007291470.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
gi|433296245|gb|AGB22065.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
Length = 406
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 220/354 (62%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y +++LL+ E+ ++R+ E API+ +YW +AEFP ++ L +
Sbjct: 22 ADFYAYEELLSDSEREKVARIRDFFRTEAAPIVDDYWARAEFPHELVKGFAKLGLLDWAD 81
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
P S I E+A D S S F VHS LAM I CGSEEQK+++LP++++
Sbjct: 82 PDSSEPAPSNLMTGITAMEMAHADPSLSVFFGVHSGLAMGAILTCGSEEQKRRWLPAMSR 141
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I +ALTEP GSD A + TTA + WIL+G KRWIGN+TFAD++V++AR+ T
Sbjct: 142 FEKIGAFALTEPHGGSDVAGGMETTARREADEWILDGAKRWIGNATFADLVVVWARDVET 201
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N++ G++V++ PGLT TKIENK LRIVQN DI+L + VP+ +RL NSF+DT+++L
Sbjct: 202 NRVLGFVVERGTPGLTATKIENKFALRIVQNADIMLDECRVPEANRLQNANSFRDTAEIL 261
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R VAWQ +G+ Y++ +Y +ER QFG P+ FQ+ Q LV+MLGN A +
Sbjct: 262 RRTRSGVAWQAVGVQFAAYELALQYAEERTQFGRPIGKFQMVQDLLVKMLGNATACAGMM 321
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L + G ++L K++ T R RETV REL GGNGI+ D+ + + +
Sbjct: 322 TRLAQLQQAGVYRDEQSALAKAYCTVRMRETVHWARELFGGNGIVLDYNIGRFV 375
>gi|453053973|gb|EMF01430.1| glutaryl-CoA dehydrogenase [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 394
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 223/362 (61%), Gaps = 6/362 (1%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
PA P D++ + DLL E+A +R+ +E+EI P+ W +AEFPF + K+
Sbjct: 4 PADPTP----DFFGYADLLGDAERAELAAIRDHLEQEIKPLADAAWARAEFPFEAVEKIA 59
Query: 97 ALRVAGGTIKGYG-CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
A+ AG T +G + E+ RVD S F VH+ LAM +I GS+EQ
Sbjct: 60 AINPAGYTYPEFGDGRERGALFSGFLTLELNRVDPSLGVFCGVHTGLAMGSIHGGGSDEQ 119
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
++++LP +A + TI +ALTEP GSD A + TTA + W+L+G KRWIGN TFAD+
Sbjct: 120 RERWLPDMAAMRTIGAFALTEPEGGSDVAGGMRTTARREGDTWVLDGAKRWIGNGTFADL 179
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+V++AR+T + G++V KD PG T TKIE KI LR VQN DI L V VP+ DRL +
Sbjct: 180 VVVWARDTADGHVKGFVVPKDTPGFTATKIEGKIALRTVQNADITLDGVRVPEADRLQRI 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ F+DT+ +LA +R VAWQ + +++ Y++ Y +R QFG P+ AFQ+ Q LV+ML
Sbjct: 240 DGFRDTAAILARTRGGVAWQALAVAVRAYELARAYAVDRTQFGRPIGAFQLVQDLLVKML 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN+ AM + RL +L E G T A+L K++ TAR RE VA REL GGNGI+ ++ +
Sbjct: 300 GNVTAMFGMTVRLAQLTEAGRGTAEQAALAKAFTTARMRECVAWARELFGGNGIVLEYEI 359
Query: 395 AK 396
AK
Sbjct: 360 AK 361
>gi|433459170|ref|ZP_20417013.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
crystallopoietes BAB-32]
gi|432191848|gb|ELK48771.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
crystallopoietes BAB-32]
Length = 396
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 225/361 (62%), Gaps = 5/361 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
P D+Y F+ LL E+ +VR+ + KE+ PI + W + +FP +IPKL L
Sbjct: 9 DNLPYSDGDFYAFEQLLAPAERDRLQEVRDWLAKEVRPIAVDCWTRGQFPTEIIPKLAEL 68
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
V + GHS A + AE R D S +TF+ VH L +I + S EQK+
Sbjct: 69 DVVSPVRR----QGHSNLLAGMIHAEFTRADTSIATFMGVHDGLFTGSIEVLASNEQKEA 124
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVI 217
+LP + L I + LTEP GSD + T + EGG WIL G KRWIGN+TF+D +VI
Sbjct: 125 WLPDIYALKKIGAFGLTEPLGGSDVAGGTRTTARREGGQWILNGAKRWIGNATFSDWVVI 184
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
FAR+ NQ+ G+LV PG T TKIENKI LR VQN DI+L V VP+E RL G NSF
Sbjct: 185 FARDLDDNQVKGFLVDTSLPGYTATKIENKISLRTVQNADIILDNVAVPEEYRLQGANSF 244
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+DT+KVL V+R+ VAWQ +G + +D+ Y +R+QFG PLA+FQ+ QQ+LVQ+LGN
Sbjct: 245 KDTNKVLKVTRLAVAWQAVGQQLAAFDVARNYSLQRQQFGKPLASFQLVQQQLVQILGNA 304
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
A + + +L +L + GA ++L K++ TAR RE+VALGR +LGGNGI++D+ +AK+
Sbjct: 305 VASMGMMVQLAQLEDAGAAQDEQSALAKAFTTARMRESVALGRSILGGNGIVADYEMAKI 364
Query: 398 I 398
Sbjct: 365 F 365
>gi|29827888|ref|NP_822522.1| glutaryl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29604989|dbj|BAC69057.1| putative glutaryl-CoA dehydrogenase [Streptomyces avermitilis
MA-4680]
Length = 403
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 226/355 (63%), Gaps = 3/355 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A+D+Y + LL E+ + R M E+ P++ EYW K EFP +I K L +AG
Sbjct: 16 AADFYDIESLLPPHERELLTHARAFMRTEVKPLVNEYWAKGEFPRELIGKFRDLGLAGVP 75
Query: 105 IKGYGCPGHSVTGAAIAI--AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+GYG P + + + + E R DAS +TF VHS LAM +I G +EQ+ ++LPS
Sbjct: 76 YEGYGDPLPAGSNLLVGMLSMEYTRTDASSATFFGVHSGLAMYSIYRGGDQEQRDRWLPS 135
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+A L+TI +A+TEP GSD A + TTA + W+L G KRWIGN+TFAD++V++AR+
Sbjct: 136 MAALDTIGAFAMTEPLGGSDVAGGMRTTARRDGENWVLNGAKRWIGNATFADLVVVWARD 195
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G++V+K PG + KIENKI RIV+N +I L V VP+ +RL ++SF+D +
Sbjct: 196 EADGKVKGFVVEKGTPGFSPVKIENKIAFRIVENAEITLTDVKVPEANRLQRIDSFRDVA 255
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
++L +R VAWQ +G+ +G Y++ Y KERKQFG P+A FQ+ Q LV+ LGNI A
Sbjct: 256 EILRATRSGVAWQALGVMLGAYELALGYAKERKQFGRPIARFQMVQDLLVKSLGNITACW 315
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L + G H+SL K+++T+R RE VA RE+ GGNGI+ D+ +A+
Sbjct: 316 GMLVQLARLQDAGVFRDEHSSLAKAFVTSRMREVVAWCREIFGGNGIVLDYDIAR 370
>gi|297625153|ref|YP_003706587.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
radiovictrix DSM 17093]
gi|297166333|gb|ADI16044.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
17093]
Length = 450
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 230/372 (61%), Gaps = 6/372 (1%)
Query: 28 ISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEF 87
+ +A P+ TP + P D+Y LLT ++ ++++VR ME+E+ PI+ +YW++ EF
Sbjct: 49 MKLAAPK-TPKAP-PEINGDFYDIGALLTPRQREIQLRVRAFMEREVEPIINDYWQRDEF 106
Query: 88 PFHVIPKLGALRVAGGTI--KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAML 145
P +I K L + +G P +V I E+ARVD S +TF VH+ LAM
Sbjct: 107 PKELIGKFRELDLIKEIFDDEGNRTPDAAVL-EGITGMEMARVDVSTTTFFGVHAGLAMC 165
Query: 146 TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKR 204
+I + GSE Q++++LP + + I + LTEP GS S TT + EG W+L G+K
Sbjct: 166 SILVGGSEAQRREWLPRMRRFEVIGAFGLTEPEVGSAISQGMTTTCRREGDTWVLNGEKY 225
Query: 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
WIGN+TF+D+ +++AR+ NQ+ G++V++D PG +V KI NKI LR V+NG I L+
Sbjct: 226 WIGNATFSDITIVWARDEADNQVKGFIVRRDNPGFSVRKIANKIALRAVENGHITLQNCR 285
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
VP+ DRL SF+ T+ VL ++R VAWQ +G +MG Y+ Y ++R QFG P+A FQ
Sbjct: 286 VPESDRLQNATSFRTTADVLRMTRAGVAWQGVGCAMGAYEKSLAYAQKRLQFGRPIANFQ 345
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q LVQMLGN+ AM + +RL +L + G MT ASL K + R RETVAL REL G
Sbjct: 346 LVQNLLVQMLGNVTAMQTMCFRLAQLQDAGVMTDEQASLAKVFTAKRCRETVALARELHG 405
Query: 385 GNGILSDFLVAK 396
G GIL D VA+
Sbjct: 406 GKGILLDHHVAR 417
>gi|271968155|ref|YP_003342351.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
gi|270511330|gb|ACZ89608.1| Glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
Length = 382
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 224/354 (63%), Gaps = 6/354 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D+Y + +LL +E+ + ++VRE M +E+API E W A FP +IP+ L +AG
Sbjct: 3 GDFYDYFELLDEDEKEIVLRVREFMAREVAPIADESWTNARFPHQLIPEFAKLDIAGLPY 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+G +TG + E+ RVD S TF VH+ LAM +I GS+EQ++++LP +A
Sbjct: 63 RG---ARSLLTG--FLVLEMNRVDPSMGTFFGVHNGLAMGSIDRLGSDEQRERWLPPMAA 117
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I +ALTEP GSD A+ L TTA + W+L G KRWIGN+TFAD++V++A++
Sbjct: 118 MEKIGAFALTEPEGGSDVAAGLRTTARREGDVWVLNGAKRWIGNATFADLVVVWAKDEAD 177
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
Q+ G++V+K PG + TKIENKI LR VQN DI L V +E+RL N F+DT+ +L
Sbjct: 178 GQVKGFVVEKGTPGFSATKIENKIALRTVQNADITLTNCLVREENRLRDANGFRDTAAIL 237
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R VAWQ +G MG Y++ Y K+R+QFG P+A FQ+ Q LV+MLGN+ + +
Sbjct: 238 RQTRGGVAWQAVGCMMGAYELALEYAKDREQFGRPIAGFQLVQDLLVRMLGNVTCSLGMV 297
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L + G H+++ K++ T R RE V GRE++GGNGI+ D+ + + +
Sbjct: 298 VRLAQLQDAGVYKDEHSAMAKAFCTVRMREAVGWGREIMGGNGIVLDYGMGRFV 351
>gi|222635529|gb|EEE65661.1| hypothetical protein OsJ_21262 [Oryza sativa Japonica Group]
Length = 243
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 167/204 (81%)
Query: 193 VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
V GGWIL GQKRW N +FADV V+ A NT+ NQING++V +PGL ++KIENK LR+
Sbjct: 2 VPGGWILNGQKRWPANGSFADVFVVLACNTSNNQINGFIVNGGSPGLKISKIENKTSLRV 61
Query: 253 VQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKE 312
VQN DILL+ VFVPD+DRLPG NSFQD K L+ S V+VAW IGI+ GVYD C RYL E
Sbjct: 62 VQNCDILLEDVFVPDDDRLPGANSFQDLVKALSFSCVIVAWISIGIAAGVYDACLRYLGE 121
Query: 313 RKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARA 372
RKQFGAPLAAFQ+NQ+KLV+MLGNIQAM L+GWRLCKL++ G MT G ASLGK+WIT +A
Sbjct: 122 RKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQASLGKAWITKQA 181
Query: 373 RETVALGRELLGGNGILSDFLVAK 396
RETVALGRELLGGNGI++DF V K
Sbjct: 182 RETVALGRELLGGNGIVTDFHVGK 205
>gi|115467966|ref|NP_001057582.1| Os06g0347100 [Oryza sativa Japonica Group]
gi|113595622|dbj|BAF19496.1| Os06g0347100, partial [Oryza sativa Japonica Group]
Length = 242
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 167/204 (81%)
Query: 193 VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
V GGWIL GQKRW N +FADV V+ A NT+ NQING++V +PGL ++KIENK LR+
Sbjct: 1 VPGGWILNGQKRWPANGSFADVFVVLACNTSNNQINGFIVNGGSPGLKISKIENKTSLRV 60
Query: 253 VQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKE 312
VQN DILL+ VFVPD+DRLPG NSFQD K L+ S V+VAW IGI+ GVYD C RYL E
Sbjct: 61 VQNCDILLEDVFVPDDDRLPGANSFQDLVKALSFSCVIVAWISIGIAAGVYDACLRYLGE 120
Query: 313 RKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARA 372
RKQFGAPLAAFQ+NQ+KLV+MLGNIQAM L+GWRLCKL++ G MT G ASLGK+WIT +A
Sbjct: 121 RKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQASLGKAWITKQA 180
Query: 373 RETVALGRELLGGNGILSDFLVAK 396
RETVALGRELLGGNGI++DF V K
Sbjct: 181 RETVALGRELLGGNGIVTDFHVGK 204
>gi|389863052|ref|YP_006365292.1| glutaryl-CoA dehydrogenase [Modestobacter marinus]
gi|388485255|emb|CCH86799.1| Glutaryl-CoA dehydrogenase [Modestobacter marinus]
Length = 392
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 218/357 (61%), Gaps = 4/357 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ F LL +EQ + +RE +E E+ P + W AEFP +IPK + G
Sbjct: 8 ADFFGFQSLLPDDEQKELVALREFLESEVKPRVNAAWAAAEFPHDLIPKFAEADIVGRAY 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
G P S E++RVD S +TFI VH LAM +I + GS+EQ+Q+++PS+ +
Sbjct: 68 DWDGRPRASRLFTGFQALELSRVDPSMATFIGVHQGLAMGSIMVLGSKEQRQRWIPSMMR 127
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ TI + LTEP GSD A + TTA + W+L+G KRWIGN TFADV+V+FAR+
Sbjct: 128 MQTIGAFGLTEPEGGSDVARGMRTTARRDGDSWVLDGAKRWIGNGTFADVVVVFARDVDD 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+Q+ ++V+K PG TKIE+K LR VQN D+ +P E++L N+F+D +KVL
Sbjct: 188 DQVKTFVVEKGTPGFVATKIEDKFSLRTVQNADLTFTDCRIPAENKLEDGNTFKDVNKVL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
V+R VAW +G +G Y++ Y KER+QFG P+ +FQ+ Q L +MLGN+ A + +
Sbjct: 248 KVTRGGVAWSGVGCQLGAYEVALAYAKEREQFGKPIGSFQLIQDLLARMLGNVTASLGMT 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLF 401
R+ +L E A+ A+L KS++TAR RETVA REL GGNGI+ L VI F
Sbjct: 308 VRVSQLQEVDALRDDQAALAKSYVTARGRETVAWARELFGGNGIV---LENDVIRFF 361
>gi|379734601|ref|YP_005328107.1| acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
gi|378782408|emb|CCG02068.1| acyl-CoA dehydrogenase [Blastococcus saxobsidens DD2]
Length = 392
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 220/352 (62%), Gaps = 1/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D Y ++ LL+++E+ +R+ +++EI P + E+WE A FP +IP+ + G +
Sbjct: 8 GDLYAYESLLSADEREELAGIRDFLQREIKPRVNEHWEAATFPMDLIPRFAEAGLVGRSY 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
G P S E +RVD S +TF+ VH+ LAM +I GSEEQK+++LP +
Sbjct: 68 DTEGSPRGSRLFTGFIALETSRVDPSMATFLGVHNGLAMGSIVNLGSEEQKRRWLPGMLA 127
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
L I C+ALTEP GSD A L TTA + GW+L+G KRWIGN TFAD++V+FAR+
Sbjct: 128 LEKIGCFALTEPHGGSDVALGLETTARRDGDGWVLDGAKRWIGNGTFADLVVVFARDLAD 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + ++V+K+ PG T TK+E K LR VQN D+ + +P ++L G N+F D ++VL
Sbjct: 188 DSVKTFVVEKNTPGFTATKMEGKYALRTVQNADVNFEGCRIPAGNKLDGGNTFADVNRVL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
++R VAW +G MG ++ Y KER+QFG P+A FQ+ Q L +M GN+ A + +
Sbjct: 248 ELTRGGVAWNAVGCQMGAFEAALAYAKEREQFGRPIAGFQLIQDLLARMAGNVTASLGMA 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L E+G HA+L KS++T++AR+TVA REL GGNGIL + V +
Sbjct: 308 VRVAQLQEEGVFRDDHAALAKSYVTSQARQTVAWARELFGGNGILIEHDVVR 359
>gi|163839283|ref|YP_001623688.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162952759|gb|ABY22274.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 398
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 221/364 (60%), Gaps = 5/364 (1%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A + P D+Y F+ LL+ E+ +VR+ + KE+ PI ++W + EFP +IPK
Sbjct: 7 AVDVNNLPYADGDFYSFEQLLSDAEREKLQEVRDFLAKEVKPIAIDHWNRTEFPMDLIPK 66
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+ L V + G+S A I AE R D S +TF+ VH L ++ L SEE
Sbjct: 67 ISELDVMSPVRR----QGYSSLFAGILHAEFTRADTSIATFMGVHDGLFTGSVELLASEE 122
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFAD 213
QK +LP + + I + LTEP GS + T K EG W+L G KRWIGN+TF+D
Sbjct: 123 QKALWLPDIYSMKKIGAFGLTEPLGGSYVAGGTRTTAKREGDNWVLNGAKRWIGNATFSD 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+VI+AR+ NQ+ ++V PG TKIENKI LR VQN DI L+ + + ++ +L
Sbjct: 183 WVVIYARDVDDNQVKAFMVDTATPGYKATKIENKISLRSVQNADITLENLVISNDFKLEH 242
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
NSF+DT+KVL V+R+ VAWQ +G M +D+ RY ER QFG PLA+FQ+ Q +LVQ+
Sbjct: 243 GNSFRDTNKVLKVTRLAVAWQAVGQQMAAFDVARRYAVERVQFGRPLASFQLIQDQLVQI 302
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN A + + RL +L + G ++L K++ +AR RE+VA+GR +LGGNGI++D+
Sbjct: 303 LGNTVASMGMMVRLSQLEDLGQAKDEQSALAKAFTSARMRESVAIGRSILGGNGIVTDYE 362
Query: 394 VAKV 397
+AK+
Sbjct: 363 MAKI 366
>gi|300788215|ref|YP_003768506.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|384151646|ref|YP_005534462.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|399540098|ref|YP_006552760.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|299797729|gb|ADJ48104.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|340529800|gb|AEK45005.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|398320868|gb|AFO79815.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length = 398
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 225/356 (63%), Gaps = 7/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y F+ LL +E+ + +K RE M ++ P++ E WE FP +I +AG
Sbjct: 12 ADFYNFETLLGDDERKLLVKAREFMRTDVKPLVNENWEAGTFPKELIGMFRESGLAGLPY 71
Query: 106 KGYG----CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+GYG H +TG + E++R DAS +TF VH+ LAM +IA GS+EQ+ ++LP
Sbjct: 72 EGYGEHKPAVSHLLTG--MMAMEMSRTDASVATFFGVHNGLAMYSIASGGSQEQRDRWLP 129
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
+A ++ I +A+TEP GSD A + TTA + WIL G K+WIGN+TFAD +V++AR
Sbjct: 130 EMAAMDKIGAFAMTEPLGGSDVAGGMRTTAKRDGDSWILNGAKKWIGNATFADYVVVWAR 189
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ N + G++V+K PG KI+ K RIV+N +I L V VP+E+RL G+NSF+D
Sbjct: 190 DLDDNHVKGFVVEKGTPGFVAEKIQGKTAFRIVENAEITLTDVRVPEENRLQGINSFRDV 249
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VAWQ +G+ +G Y++ Y KER QFG P+A FQ+ Q LV+ LGNI A
Sbjct: 250 AEILRATRGGVAWQALGVMIGAYELALDYAKERTQFGRPIARFQLVQDLLVKSLGNITAS 309
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L + G H+SL K+++TAR RE VA RE+ GGNGI+ ++ VA+
Sbjct: 310 WGMLVQLARLQDAGIFQDEHSSLAKAFVTARMREVVAWSREIFGGNGIVLEYDVAR 365
>gi|444306978|ref|ZP_21142729.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
gi|443480684|gb|ELT43628.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
Length = 389
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 227/364 (62%), Gaps = 16/364 (4%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ + LL+ E+ ++R + E+AP ++W +A+FP H++PKL AL ++
Sbjct: 14 ADFFDVESLLSQPERNKLAELRAFLAAEVAPYAVDWWNRAKFPAHILPKLAALELSTPAQ 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY S A + IAEI RVD S +TF LVH L + ++ GS++Q+Q+ L +
Sbjct: 74 RGY-----SNLFAGLVIAEITRVDTSIATFFLVHHDLFVESLYAFGSQQQQQRLLADASN 128
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKV-------EGG---WILEGQKRWIGNSTFADV 214
L +ALTEP +GSD A + T A ++ +GG W+L G KRWIGN TF D
Sbjct: 129 LRITGAFALTEPDHGSDVAGGMETRARRISSATGKPDGGGDTWVLNGAKRWIGNGTFCDY 188
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
++++AR+ + G++V PG++ T+IENKI LR VQN DI+ K V V + DR +
Sbjct: 189 MLVWARDEADGAVRGFIVDATLPGISRTRIENKIALRTVQNADIVFKDVRVAEADRFAAI 248
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+SF DT ++L SR+MVAWQ +G + +D+ +Y ER QFG PLA FQ+ QQ+LV ML
Sbjct: 249 SSFDDTKELLRSSRIMVAWQAVGQQLAAFDVARQYAVERHQFGRPLAQFQLIQQQLVTML 308
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN A + + L +L ++GA +L KS+++AR RETVALGR +LGGNGI++D+ +
Sbjct: 309 GNTVASMGMMAGLARLQDQGAADMPQVALAKSYLSARMRETVALGRSILGGNGIVTDYRM 368
Query: 395 AKVI 398
AK+
Sbjct: 369 AKIF 372
>gi|119961860|ref|YP_946557.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
gi|119948719|gb|ABM07630.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
Length = 435
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/371 (42%), Positives = 227/371 (61%), Gaps = 23/371 (6%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ F+ LL+ +EQ ++R + EIAP +WEKAEFP H++PKL ALR++
Sbjct: 39 ADFFDFESLLSVQEQRKLNELRAFLASEIAPHAGHWWEKAEFPEHILPKLAALRLSAPAQ 98
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY H G + IAE+ RVD S +TF +VH L + ++ GS+ Q+ +YL +
Sbjct: 99 RGYT---HLFAG--LVIAEMTRVDTSIATFFMVHHDLFVESLYDFGSDVQQDRYLDDASN 153
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVE-----GG--WILEGQKRWIGNSTFADVLVI 217
L T +ALTEP +GSD A + TTA +VE GG W++ G KRWIGN TF D +++
Sbjct: 154 LRTTGAFALTEPNHGSDVAGGMETTARRVERADSDGGDYWVINGAKRWIGNGTFCDYMLV 213
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ + ++V PG+T ++IENKI LR VQN DI+ V V + DR G++SF
Sbjct: 214 WAKDEKDGAVRAFIVDASLPGITRSRIENKIALRTVQNADIVFADVEVAEADRFAGISSF 273
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
DT+ +L SR+MVAWQ +G + +D+ +Y ER QFG PLA FQ+ QQ LV MLGN
Sbjct: 274 ADTNHLLRGSRIMVAWQAVGQQLAAFDVARQYAVERMQFGKPLAKFQLIQQHLVDMLGNA 333
Query: 338 QAMILVGWRLCKLYEK----------GAMTPGHASLGKSWITARARETVALGRELLGGNG 387
A + + R+ +L E G +L K++ +AR RETVALGR +LGGNG
Sbjct: 334 VASMGMMVRIAQLQEDIFTDAQGVRHGGADMAQVALAKAYCSARMRETVALGRSILGGNG 393
Query: 388 ILSDFLVAKVI 398
I++D+ +AK+
Sbjct: 394 IVTDYRIAKIF 404
>gi|325001171|ref|ZP_08122283.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
Length = 380
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 212/348 (60%), Gaps = 1/348 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P +D Y + LL + + +VR E+ IAPI +YW++AEFP +IP L V G
Sbjct: 6 PLPADVYGYAGLLDDTDTEILARVRRFAEQRIAPIADDYWDRAEFPHELIPGFAELDVVG 65
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
P S + E++R+D S +TF VH+ LA+ +I LCGSEEQK+++LP+
Sbjct: 66 LARDWPDRPARSRLLTSFVSMELSRIDPSMATFFGVHAGLALTSIDLCGSEEQKERWLPA 125
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+ ++ I +AL+EP GSD A L TTA + W+L G KRWIGN TFAD++V++AR+
Sbjct: 126 MRRMERIGAFALSEPHGGSDVAGGLETTAERDGDAWVLNGAKRWIGNGTFADLVVVWARD 185
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ + G++V+KD PG TK+E K+ LR VQN D+ V VP+ +RLPG SF DT+
Sbjct: 186 VADDAVKGFVVEKDMPGFAATKMEGKLALRSVQNADLTFTGVRVPEANRLPGAQSFADTN 245
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VL V+R VAW +G GVY++ Y +R QFG P+AAFQ+ Q LV +LGN+ A +
Sbjct: 246 RVLRVTRGGVAWNAVGAMAGVYELARDYAVDRVQFGQPIAAFQLVQDHLVSILGNVTASL 305
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
+ R+ ++ + G A+L K T R++VA RE+ GGNGIL
Sbjct: 306 GMAVRIAQMQDDGTFRDEQAALAKRQATLMLRDSVARAREVFGGNGIL 353
>gi|108804881|ref|YP_644818.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108766124|gb|ABG05006.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 404
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 233/355 (65%), Gaps = 2/355 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
A+DYY D+LL EE+ VR +VR EKE+ P++ +YW + EFPF ++ K L + GG
Sbjct: 12 SATDYYLLDELLGEEEREVRERVRAFCEKEVLPVIGDYWNREEFPFELVGKFADLGIVGG 71
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I+GYGCPG S I AE+AR D S +TF VHS LAM TIA+ GSEEQKQ++LPS+
Sbjct: 72 AIRGYGCPGLSRLAEGIVAAELARADGSINTFYGVHSGLAMGTIAMLGSEEQKQRWLPSM 131
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A++ I + LTEP +GSD L TTA + W+L+G+K+WIGN++FAD+++++AR+ +
Sbjct: 132 ARMEKIGAFGLTEPEHGSDVVMLETTARREGDEWVLDGRKKWIGNASFADLVIVWARDLS 191
Query: 224 TNQINGYLVKKDAPG--LTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G++V+++ G + I+ K G R V +I L+ V VP E++L G NSF+DTS
Sbjct: 192 DGEVKGFVVEREEAGEAFSAEVIKGKTGKRAVWQAEIELRGVRVPHENKLEGANSFKDTS 251
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVL +R VAW+ +G ++ Y+ Y KER+ F PL ++Q+ Q KL ML I AM
Sbjct: 252 KVLTATRYGVAWEGVGHAVAAYEAALAYAKERRIFTRPLESYQLIQNKLANMLSEITAMQ 311
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ +RL +L+E+G MT G ASL K +AR+ R++LGGNG+L + +V K
Sbjct: 312 LICFRLAQLFEQGKMTGGMASLAKMHTAKKARQVCLEARDILGGNGLLLEHVVGK 366
>gi|373253444|ref|ZP_09541562.1| glutaryl-CoA dehydrogenase [Nesterenkonia sp. F]
Length = 394
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 221/355 (62%), Gaps = 8/355 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D++ + + L E+A ++RE +E+EI P+ + W+ AEFPF + K +LR+AG
Sbjct: 10 DFFGYAEKLPDSERAELAEIREFLEREIKPLANQAWDTAEFPFAAVEKFASLRLAGYQFP 69
Query: 107 GYGCPGHSVTGAAIAIA----EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
YG VT + + E+ R+D S + F VH+ LAM +I G + Q+ +++P
Sbjct: 70 EYG---DGVTRSPLFTGFLSLELNRIDPSLAVFSGVHTGLAMGSIYNGGDQGQRDRWMPD 126
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+ +++I +ALTEP GSD A + TTA + W+L G KRWIGN TFAD +V++AR+
Sbjct: 127 MVDMSSIGAFALTEPDGGSDVAGGMRTTARREGDEWVLNGAKRWIGNGTFADRVVVWARD 186
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
Q+ G++V+ A G TKIE KI LR VQN DI L +V VP+ DRL G+NSF+DT+
Sbjct: 187 EADGQVKGFVVETPAAGFEATKIEGKIALRTVQNADITLSEVRVPEADRLQGINSFRDTA 246
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVLA +R VAWQ +G+++ Y++ Y +R+QFG P+ FQ+ Q LV+MLGN+ AM
Sbjct: 247 KVLASTRGGVAWQALGVAVRAYELAREYATQREQFGKPIGGFQMIQDLLVKMLGNVTAMF 306
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V RL +L G + A+L K++ T R RE V+ REL GGNGI+ D+ VAK
Sbjct: 307 GVVVRLNELVADGGGSAEQAALAKAFATTRMREVVSWARELFGGNGIVLDYEVAK 361
>gi|220911516|ref|YP_002486825.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|219858394|gb|ACL38736.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
chlorophenolicus A6]
Length = 411
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 230/370 (62%), Gaps = 22/370 (5%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ + LL+ E+ ++R+ + EIAP ++W AEFP H++PKL AL ++
Sbjct: 16 ADFFAVESLLSQAERNKLAELRDFLAAEIAPHAGDWWNNAEFPAHILPKLAALELSTPAQ 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY H G + IAE+ RVD S +TF LVH L + ++ GS QK++ L +
Sbjct: 76 RGYS---HLFAG--LVIAEMTRVDTSIATFFLVHHDLFVQSLHAFGSPGQKERLLADASD 130
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKV--------EGG--WILEGQKRWIGNSTFADV 214
L T +ALTEP +GSD A + TTA ++ +GG W+L G KRWIGN TF D
Sbjct: 131 LRTTGAFALTEPLHGSDVAGGMETTARRISSATGEDDDGGDAWVLNGAKRWIGNGTFCDY 190
Query: 215 LVIFARNTT------TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
++++AR+ + + + G++V PG+T +++ENKI LR VQN DI+ K V V +
Sbjct: 191 MLVWARDESAAPDNPSGSVRGFIVDATLPGITRSRMENKIALRTVQNADIVFKDVRVAEA 250
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
DR V+SF DT ++L SR+MVAWQ +G + +D+ +Y ER+QFG PLA FQ+ QQ
Sbjct: 251 DRFTQVSSFDDTKELLRSSRIMVAWQAVGQQLAAFDVARQYAVERRQFGRPLAHFQLIQQ 310
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+LV MLGN A + + +L +L E+G+ +L KS+ +AR RETVALGR +LGGNGI
Sbjct: 311 QLVTMLGNAVASMGMLVQLARLQEEGSADMAQVALAKSYASARMRETVALGRSILGGNGI 370
Query: 389 LSDFLVAKVI 398
++D+ +AK+
Sbjct: 371 VTDYRMAKIF 380
>gi|340507423|gb|EGR33390.1| hypothetical protein IMG5_054550 [Ichthyophthirius multifiliis]
Length = 411
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 224/368 (60%), Gaps = 5/368 (1%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
Q T + + A DY F LL E+ R+K+RE ++ IAP + EY E AEFP IP
Sbjct: 10 QFTQKATYIDSAVDYLNFQQLLNKEDNDFRLKLREFLQLNIAPTINEYVESAEFPEEYIP 69
Query: 94 KLGALRVAGG-TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
KL +++ T K YG S+ + E++R D +TF++V L M TI GS
Sbjct: 70 KLKEIQLLKNLTDKPYG-NSSSILAQGVLYLELSRCDPGLATFVIVQHGLLMSTINQLGS 128
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
+EQK KYLP + L W LTE GSDA+++ TT + GW+L G KRWIGN
Sbjct: 129 QEQKDKYLPLMRDLELTGGWGLTEFKNGSDATSIQTTVKSTKDGWVLNGDKRWIGNGN-R 187
Query: 213 DVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
D++V++ARN N+I G+L+ PG+ I++K+ LRIVQN + + VF+P E+ L
Sbjct: 188 DIMVVWARNIEDNNKIQGFLLNLKTPGVHTEVIKHKLALRIVQNCQLNFQNVFIPKENYL 247
Query: 272 PGVNSF-QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
F + TSK+L SR++V W GI++GVYD +Y+ ERKQFG P+++FQ+ Q+KL
Sbjct: 248 VKATDFSKGTSKILLHSRILVCWLAAGIAVGVYDHVIKYISERKQFGKPVSSFQLQQEKL 307
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
V+++G Q+++L+ WR+ +Y++G T G A+L K++ T++ RE LGRE+ GGNGI+
Sbjct: 308 VRIMGYCQSILLMCWRVSTIYDQGKATLGQATLCKAFTTSKTREIARLGREMFGGNGIII 367
Query: 391 DFLVAKVI 398
D V K +
Sbjct: 368 DNYVMKAL 375
>gi|433649017|ref|YP_007294019.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
gi|433298794|gb|AGB24614.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis JS623]
Length = 400
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 216/360 (60%), Gaps = 3/360 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P D+Y F+ LL+ EE+ + K R + EI P++ E W KAEFPF +I K +
Sbjct: 10 PGLVGDFYNFEGLLSDEERKILRKARTFLRDEIKPLVNEAWAKAEFPFELIDKFATSGLG 69
Query: 102 GGTIKGYGCPGHSVTG--AAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G GYG +VT + + E+AR+D S S F VH+ LA +I G++EQ+ ++
Sbjct: 70 GLAYDGYGDHKPAVTNMLSGMLAVELARLDPSVSVFFGVHNGLAGDSIYDGGNKEQRDRF 129
Query: 160 LPSLAQLNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP++ I + LTEP GSDAS L TTA + W+L G KRWIGN+TFAD +VI+
Sbjct: 130 LPAMTSFKKIGAFGLTEPLSGSDASGGLRTTAKREGDTWVLNGAKRWIGNATFADYVVIY 189
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ N + G++V+K PG + KIENK+ LR VQN +I L V VP+ +RL +NSF+
Sbjct: 190 ARDLADNNVKGFVVEKGTPGFSPVKIENKVSLRTVQNAEITLTNVRVPEANRLQNINSFK 249
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
D +K+L +R V+W +G+ +G Y+ Y K+R+QFG P+A FQ+ Q LV+ L NI
Sbjct: 250 DVAKILRFTRTAVSWMAVGVMVGAYEHALEYAKKREQFGRPIAKFQMIQDLLVKSLANIT 309
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
A + +L + + G ASL K + TAR RE V RE+ GGNGI+ D+ VA+ +
Sbjct: 310 ASWGMVAQLARQQDAGVFDDAQASLAKLYATARMREVVTWCREICGGNGIVLDYDVARYM 369
>gi|152967448|ref|YP_001363232.1| acyl-CoA dehydrogenase domain-containing protein [Kineococcus
radiotolerans SRS30216]
gi|151361965|gb|ABS04968.1| acyl-CoA dehydrogenase domain protein [Kineococcus radiotolerans
SRS30216]
Length = 393
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 216/354 (61%), Gaps = 1/354 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P SDY+ LT E+ V +VR +++E+ P+ YWE+AE P ++ + G L + G
Sbjct: 8 PRGSDYFDLAADLTDHEREVWAQVRAFVDEELIPVAGGYWERAEMPLDLLKEYGQLNLVG 67
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
++G G P S T A + E++R D S +T + V + LAM +IA GS+EQK+++LP
Sbjct: 68 DALEGPGVPRLSHTAAGLVTMELSRGDGSFATMLGVQAGLAMRSIAFLGSQEQKERWLPP 127
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A+L + + LTEP +GSDA AL TTA + ++L+G KRWIG T DV V++AR
Sbjct: 128 MARLEVLGAFGLTEPDHGSDAVALATTARREGDEYVLDGAKRWIGFGTVCDVCVVWARGE 187
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
Q+ G+LV++ PG IE K LR + N DI L V VP +RLPG NSF+DT +
Sbjct: 188 D-GQVQGFLVERGTPGFEARVIEGKASLRAIHNADITLTGVRVPAANRLPGANSFRDTGR 246
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
VL+ +R +AW +G + Y+ Y ERKQFG PLA+FQ+ Q KLVQML + AM L
Sbjct: 247 VLSATRAGIAWGALGHATAAYETALAYSLERKQFGQPLASFQLVQDKLVQMLAEVTAMQL 306
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ KL ++G +T ASL K T +AR A+ R+LLGGNGIL + VA+
Sbjct: 307 FCVRVGKLADEGRLTDTQASLAKVNSTRKARAVTAMARDLLGGNGILLEHRVAR 360
>gi|302547271|ref|ZP_07299613.1| acyl-coenzyme A oxidase 4 [Streptomyces hygroscopicus ATCC 53653]
gi|302464889|gb|EFL27982.1| acyl-coenzyme A oxidase 4 [Streptomyces himastatinicus ATCC 53653]
Length = 405
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 219/354 (61%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y ++ LL EE+ + + R M + P++ E W + EFP +I +AG
Sbjct: 19 ADFYHYESLLPDEERKLLLTARSLMRDRVKPLVNESWARGEFPRELIALFRDSGLAGLPY 78
Query: 106 KGYGC--PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+GYG P S + + E AR DAS STF VH+ LAM +I G +EQ+ ++LP++
Sbjct: 79 EGYGAHRPAVSNLLSGMLALETARTDASVSTFFGVHNGLAMYSIHAGGDQEQRDRWLPAM 138
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
A ++ I +A+TEP GSD A + TTA + G W+L G K+WIGN+TFAD +V++AR+
Sbjct: 139 AAMDKIGAFAMTEPLGGSDVAGGMRTTARREGGTWVLNGAKKWIGNATFADYVVVWARDV 198
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N + G++V+K PG + KIENK+ RIV+N +I L V VP+ DRL + SF+D ++
Sbjct: 199 DDNHVKGFVVEKGTPGFSPVKIENKLAFRIVENAEITLTDVRVPEADRLQNIGSFRDVAE 258
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+L +R VAWQ +G+ +G Y++ Y +ER QFG P+ FQ+ Q LV+ LGNI A
Sbjct: 259 ILRATRGGVAWQALGVMVGAYELALDYARERHQFGRPIGGFQLVQDLLVKSLGNITASWG 318
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L ++ + G H++L K+++TAR RE VA RE+ GGNGIL D +A+
Sbjct: 319 MLVQLARMQDAGIFHDEHSALAKAFVTARMREVVAWSREVFGGNGILLDHDIAR 372
>gi|66820660|ref|XP_643912.1| hypothetical protein DDB_G0274585 [Dictyostelium discoideum AX4]
gi|60472232|gb|EAL70185.1| hypothetical protein DDB_G0274585 [Dictyostelium discoideum AX4]
Length = 430
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 226/361 (62%), Gaps = 9/361 (2%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPI-MAEYWEKAEFPFHVIPKLGAL 98
K P A+D++ FD LLT +E A+R K + ++EI + + EY+E+AEFP +I +L L
Sbjct: 21 KAQPSATDFFDFDGLLTEKELAIRKKAEKFAKEEINSLNINEYYERAEFPLPIIERLKGL 80
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
G IKGYG P + + EI++ A +TF + ++ ML I GSE+QKQ
Sbjct: 81 NWVGANIKGYGSPELTSMELGLIAMEISKSSADIATFYTILLNITMLAIYYSGSEQQKQY 140
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVE--GGWILEGQKRWIGNSTFADVLV 216
YLP + L I +ALTEP GSDA+ L TA ++ GWIL G+KRWIGN+ AD++V
Sbjct: 141 YLPKMTSLEKIGAFALTEPEAGSDAAGLKCTAKQLPNGAGWILNGEKRWIGNAPMADIIV 200
Query: 217 IFARNTTTNQINGYLVK--KDAPG---LTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
I+ARN TN+I+G++++ K A G L + ++ K R VQNG I +K F+ ++ RL
Sbjct: 201 IWARNIDTNKIHGFILEPSKVASGGDQLRIETLQKKFAFRSVQNGHIFMKDCFIAEDQRL 260
Query: 272 PGVNSFQD-TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
F K L ++R++V W +G++ Y+ C +Y+K+R QFG PLA FQ+ Q++L
Sbjct: 261 TNALDFNSGPGKCLFLTRIVVGWIALGVASNAYEKCLQYVKQRNQFGQPLAQFQLVQERL 320
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
V+M NIQA+ L+ R+ +L+++G ++ G L K++ T++ARE V++ REL GGNGIL
Sbjct: 321 VKMCSNIQAISLMCHRVSQLFDQGKLSSGQVGLLKAFSTSKAREVVSMARELFGGNGILL 380
Query: 391 D 391
D
Sbjct: 381 D 381
>gi|302552880|ref|ZP_07305222.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
40736]
gi|302470498|gb|EFL33591.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
40736]
Length = 400
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 220/356 (61%), Gaps = 3/356 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
++D+Y ++ LL EE+ + +K R M ++ P++ E W K FP +I +AG
Sbjct: 12 LSADFYGYEALLPDEERKILLKARALMRDQVKPLVNENWAKDAFPTELIGLFRDSGLAGL 71
Query: 104 TIKGYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+GYG P S + E+AR DAS STF VH+ LAM +I G +EQ+ ++LP
Sbjct: 72 PYEGYGEHAPAVSNLLSGTMAMEMARTDASVSTFFGVHNGLAMYSIHSGGDQEQRDRWLP 131
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
++A ++ I +A+TEP GSD A + TTA + W+L G K+WIGN+TFAD +V++AR
Sbjct: 132 AMATMDKIGAFAMTEPLGGSDVAGGMRTTARREGDTWVLNGAKKWIGNATFADYVVVWAR 191
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ N + G++V+K PG KIE KI RIV+N +I L V VP+ +RL ++SF+D
Sbjct: 192 DVDDNHVKGFVVEKGTPGFDPVKIEGKIAFRIVENAEITLTDVRVPEANRLRNIDSFRDV 251
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VAWQ +G+ +G Y++ Y +ERKQFG P+ FQ+ Q LV+ LGNI A
Sbjct: 252 AEILRATRAGVAWQALGVMIGAYELALDYARERKQFGRPIGGFQLVQDLLVKSLGNITAS 311
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L + G H+SL K+++T+R RE VA REL GGNGIL + +A+
Sbjct: 312 WGMLVQLARLQDAGIFRDEHSSLAKAFVTSRMREVVAWSRELFGGNGILLEHDIAR 367
>gi|331694429|ref|YP_004330668.1| glutaryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
gi|326949118|gb|AEA22815.1| Glutaryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
Length = 396
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 219/352 (62%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+D++ + T+E+ R ++ E+ P + + WE+AE P+ +I +L LR+ G
Sbjct: 12 GTDFFSVREQFTAEQWDRFATTRTFVDTEVLPGVGDLWERAELPWKLIRRLPELRIVGED 71
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYG G S T + E+ R D S TF+ VH+ LAM IA+CGS EQ++++LPS++
Sbjct: 72 IQGYGAAGMSPTACGLVHMELHRGDGSLGTFLGVHAGLAMQAIAMCGSAEQRERWLPSMS 131
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
++ I +ALTEP +GSD+ AL T+A + W+L+G+KRWIGN+T ADV+V++AR+T +
Sbjct: 132 TMDRIGAFALTEPDHGSDSVALETSARRDGDHWVLDGRKRWIGNATIADVVVVWARDTDS 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V+ G T I K+ LR +Q DI L V VPDE+RL +F D ++VL
Sbjct: 192 GEVQGFVVETPTEGFAATAITGKLSLRSIQQADITLTGVRVPDENRLVEARTFADCARVL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
A +R + AW +G + YD RY ER QFG PLA+FQI QQ+LV ML ++ M L
Sbjct: 252 ANTRGICAWMALGHATAGYDAALRYAMERTQFGKPLASFQIVQQRLVHMLADLTGMQLYC 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ +L + G ++P A L K T AR ++ R+LLGGNGIL + VA+
Sbjct: 312 MQIGRLADAGRLSPTVAGLAKMNNTRAARRILSEARDLLGGNGILLEHHVAR 363
>gi|297197121|ref|ZP_06914518.1| glutaryl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
gi|297146594|gb|EDY58032.2| glutaryl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
Length = 401
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 215/351 (61%), Gaps = 3/351 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
+D+Y F+ LL EE+ + +K R M E+ P++ + W K FP +I +AG
Sbjct: 13 LTADFYHFESLLPDEERKILLKARAFMRDEVKPLVNDNWAKGVFPKELITLFRDSGLAGL 72
Query: 104 TIKGYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+GYG P S + + E+ R DAS STF VH+ LAM +I G EEQ+ ++LP
Sbjct: 73 PYEGYGEHKPAASNLLSGMLALEMTRTDASVSTFFGVHNGLAMYSIHSGGDEEQRDRWLP 132
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
++A ++ I +A+TEP GSD A + TTA + WIL G K+WIGN+TFAD +V++AR
Sbjct: 133 AMAAMDKIGAFAMTEPLGGSDVAGGMRTTARREGDTWILNGAKKWIGNATFADYVVVWAR 192
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ N + G++V+K PG KI+NK+ RIV+N +I L V VP+ +RL +NSF+D
Sbjct: 193 DVDDNHVKGFVVEKGTPGFDPVKIQNKLAFRIVENAEITLTDVPVPEANRLQNINSFRDV 252
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VAWQ +G+ G Y++ Y +ER+QFG P+ FQ+ Q LV+ LGNI A
Sbjct: 253 AEILRATRAGVAWQALGVMTGAYELALDYAREREQFGRPIGGFQLVQDLLVRSLGNITAS 312
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
+ +L +L + G H+SL K+++T+R RE V RE+ GGNGIL D
Sbjct: 313 WGMLVQLARLQDAGIFRDEHSSLAKAFVTSRMREVVGWSREIFGGNGILLD 363
>gi|219847054|ref|YP_002461487.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
aggregans DSM 9485]
gi|219541313|gb|ACL23051.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
9485]
Length = 442
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 214/359 (59%), Gaps = 2/359 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP SD+Y L+ EEQA++ K+R ME++I PI +WE+ EFP ++P L
Sbjct: 51 RVPPVNSDFYDILAELSPEEQAIQQKIRSYMEEKIRPIANSFWERGEFPHEIVPGFARLI 110
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ Y +A E+ARVD S TF VH L M +I L GS EQKQ++
Sbjct: 111 AETFGSRPYAIDALGPVLTGVACMEMARVDPSIYTFFGVHWGLCMGSIDLFGSPEQKQRW 170
Query: 160 LPSLAQLNTIACWALTEPAYGS-DASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + + I WALTEP GS A+ L TTA G W+L G K+W GN+ AD+ +I+
Sbjct: 171 LPPMQRFELIGSWALTEPDVGSATAAGLQTTARFERGHWVLNGAKKWSGNAPIADINIIW 230
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ + NQ+ G++V+++ PG V ++E KI LR VQN +I L +P+ +RLP V F+
Sbjct: 231 ARDVSNNQVQGFIVERNTPGYEVERLEGKIALRTVQNANIRLVNCRIPEANRLPNVGGFR 290
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
++ LA++R VAW G++MG Y+ Y ++R QFG P+ +FQ+ Q LVQML N+
Sbjct: 291 GVARQLAITRAAVAWAMTGVAMGAYEQALTYAQQRIQFGRPIGSFQLVQNSLVQMLANVT 350
Query: 339 AMILVGWRLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
AM + R+ ++ + G ++ ASL K + + RETVAL R +LGGNGIL + VA+
Sbjct: 351 AMQTMCLRMSQIAARTGKISQEQASLAKVFCGEKMRETVALARAVLGGNGILLEHGVAR 409
>gi|284990873|ref|YP_003409427.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
gi|284064118|gb|ADB75056.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
Length = 407
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 214/352 (60%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
++DY+Q + L+ E+ ++ R +E E+ P++ YWE+AEFP + KLGA + G
Sbjct: 23 STDYFQLREDLSPEQMDHLLRTRTFVEDEVLPVINGYWERAEFPRELAEKLGAAGLVGDG 82
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGCP A + E+ R D S TF+ V + LAM +IA+ GSEEQKQ++LP +A
Sbjct: 83 IEGYGCPPMDALSAGLVHMELNRGDGSLGTFLGVQAGLAMKSIAMLGSEEQKQRWLPPMA 142
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ + +ALTEP +GSD+ AL T+A + ++L G K+WIGN T ADV+V++AR+T
Sbjct: 143 RCEALGAFALTEPDHGSDSIALETSARRDGESYVLNGSKKWIGNGTIADVVVVWARDTDD 202
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
Q+ G+LV+K G +IE K LR V +I L+ V VP E+ LPG SF+DT VL
Sbjct: 203 GQVKGFLVEKGTQGYRARRIEGKGSLRAVWQAEIELEDVRVPAENMLPGGRSFKDTGAVL 262
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
A +R AW +G ++ Y+ Y RKQFG PL FQ+ Q++LV ML + +M L
Sbjct: 263 ATTRGSCAWMALGHAVAGYEAALTYAGRRKQFGKPLVEFQLIQERLVGMLAKVTSMQLYC 322
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL L G + P A L K+ T+ AR +A R+LLGGNGIL DF V +
Sbjct: 323 RRLADLALAGRIEPTLAGLAKAHNTSTARAVLAEARDLLGGNGILLDFHVIR 374
>gi|383636123|ref|ZP_09950529.1| glutaryl-CoA dehydrogenase [Streptomyces chartreusis NRRL 12338]
Length = 400
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 219/354 (61%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y ++ LL EE+A+ +K R + EI P++ W K EFP ++ +AG
Sbjct: 14 ADFYAYETLLPDEERAILLKARALLRDEIKPLVNSNWAKGEFPRELVGIFRDSGLAGLPY 73
Query: 106 KGYG--CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+GYG P S + + E++R DAS +TF VH+ LAM ++ G +EQ+ ++LP++
Sbjct: 74 EGYGEHRPAVSNLLSGMLAMELSRTDASVATFFGVHNGLAMYSVHSGGDQEQRDRWLPAM 133
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
A ++ I +A+TEP GSD A + TTA + W+L G K+WIGN+TFAD +V++AR+
Sbjct: 134 AAMDKIGAFAMTEPLGGSDVAGGMRTTARREGDTWVLNGAKKWIGNATFADYVVVWARDV 193
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N + G++V+K G KIE KI RIV+N +I L V VP+ +RL +NSF+D ++
Sbjct: 194 DDNHVKGFVVEKGTSGFEPAKIEGKIAFRIVENAEITLTDVRVPEANRLQNINSFRDVAE 253
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+L +R VAWQ +G+ G Y++ Y +ER+QFG P+ FQ+ Q LV+ LGNI A
Sbjct: 254 ILRATRSGVAWQALGVMTGAYELALDYARERRQFGRPIGGFQLVQDLLVKSLGNITASWG 313
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L + G H+SL K+++TAR RE VA RE+ GGNGIL D +A+
Sbjct: 314 MLVQLARLQDAGVFRDEHSSLAKAFVTARMREVVAWSREIFGGNGILLDHDIAR 367
>gi|309790696|ref|ZP_07685247.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
trichoides DG-6]
gi|308227290|gb|EFO80967.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
trichoides DG6]
Length = 424
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 218/357 (61%), Gaps = 2/357 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
PP SD+Y DLL ++ AV K+R ME+ + P++ +YWE+ EFP ++P L
Sbjct: 35 PPINSDFYDLRDLLGPDDVAVLTKIRTYMEERVRPVIGDYWERGEFPHELVPGFAHLVQE 94
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+ Y + +A E+ARVDAS TF V LAM +I++ GSE QK +LP
Sbjct: 95 TWATRPYAIDSLGPLLSGMACMEMARVDASIYTFFGVQWGLAMGSISMFGSEAQKAHWLP 154
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFAR 220
+++ I W+LTEP GS +A TT + EG W++ G K+W GN+ FAD+ V++AR
Sbjct: 155 QMSRFEAIGAWSLTEPDVGSATAAGLTTTARREGDTWVINGAKKWSGNAPFADIHVVWAR 214
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ Q+ G+L+++ PGL V K+ KI LR+VQN DI L+ VP+ +RLP +SF+D
Sbjct: 215 DLADQQVKGFLIERGTPGLHVEKLPGKIALRVVQNADIHLENCRVPERNRLPNAHSFRDV 274
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
++ LAV+R VAW G++MG Y+ Y +R+QFG P+A FQ+ Q LVQML N+ AM
Sbjct: 275 ARQLAVARGGVAWAMTGVAMGAYEHALAYANQRQQFGQPIAGFQMIQNNLVQMLANVTAM 334
Query: 341 ILVGWRLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ R+ +L + G ++ ASL K + + RETVAL R +LGGNGIL + VA+
Sbjct: 335 QVLCTRMAQLQTRDGRISQERASLAKMFCGEKMRETVALARGVLGGNGILLEHHVAR 391
>gi|163838849|ref|YP_001623254.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162952325|gb|ABY21840.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 387
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 229/385 (59%), Gaps = 14/385 (3%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
+ P P ++D+Y + LT EQ ++RE + +++AP ++W AEFP H++P
Sbjct: 2 SVPERSLP--SADFYHLESRLTGFEQQKLAQLREFLTEQVAPYCVQWWNDAEFPAHILPD 59
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
L L ++ +GY S A + I EI +VD S +TF LVH L + ++ L G+++
Sbjct: 60 LAKLGLSTVIQQGY-----SPLFAGLVIVEITKVDTSLATFFLVHHDLFVESLYLFGTDD 114
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
Q+ +YL L T +ALTEP +GSD A + TTA + W++ G KRWIGN TF D
Sbjct: 115 QRSRYLADALALRTTGAFALTEPEHGSDVAGGMTTTALRDGDEWVINGAKRWIGNGTFCD 174
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
++++ ++ + + G+++ PG++ KI+NKI LR VQN I L KV V + DR G
Sbjct: 175 YMLLWTKDAESGGVRGFILDTSLPGVSRVKIDNKIALRTVQNAHIELDKVRVSEADRFAG 234
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+NSFQDT+ +L SRVMVAWQ +G +G +++ +Y ER+QFG P+ +FQ+ Q +LV+M
Sbjct: 235 INSFQDTNVLLQGSRVMVAWQAVGQQLGAFEIARKYAVEREQFGRPIGSFQLVQAQLVKM 294
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
LGN A + + + +L M+ +L K++ T R RETVALGR +LGGNGI+SD+
Sbjct: 295 LGNATASLSM---MTQLTSLPFMSMDQVALAKAFTTERMRETVALGRSILGGNGIVSDYR 351
Query: 394 VAKVIM---LFFLHLDHFVCKNLIV 415
++K F + F LIV
Sbjct: 352 MSKCFADAEAIFTYEGSFEINTLIV 376
>gi|108803226|ref|YP_643163.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108764469|gb|ABG03351.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 385
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 225/350 (64%), Gaps = 1/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DYY D+LLT EE+AVR +VR +++E+ P++ +YWE+ E PF ++PKL L++AGGTI+
Sbjct: 4 DYYLLDELLTGEERAVRERVRAFVDREVLPVIGDYWERGEPPFELLPKLAELKLAGGTIE 63
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S A + E++R D + F SSL M I + GSEEQ++++LP +A+L
Sbjct: 64 GYGCPGLSAVAAGLVTMELSRGDGGLNIFFGGTSSLVMPAIYMLGSEEQRERWLPPMARL 123
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ +ALTEP +GSDA AL T A + G++++G+KRW+GN++FADV++++AR+ +
Sbjct: 124 EKLGAFALTEPEHGSDAVALETRARRRGEGYVIDGRKRWVGNASFADVILVWARD-DEGE 182
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ ++V++ APGL+ + K +R ++ L V VP E+RL SF+D S+VLA
Sbjct: 183 VGAFVVERGAPGLSARVMAGKTAVRSSWQAEVELSGVEVPAENRLERARSFRDASRVLAA 242
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
R AW +G + Y+ + +ER+QFG PL +FQ+ Q+KL ML I +M L+ R
Sbjct: 243 MRYGAAWAALGHAAACYEAALAHARERRQFGRPLVSFQLVQKKLAGMLAEITSMQLLCLR 302
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L ++G MT ASL K +AR R++LGGNG+L + VA+
Sbjct: 303 LSRLADQGKMTGAMASLAKMNNARKARGVCLEARDILGGNGLLLEHHVAR 352
>gi|386856537|ref|YP_006260714.1| Glutaryl-CoA dehydrogenase [Deinococcus gobiensis I-0]
gi|380000066|gb|AFD25256.1| Glutaryl-CoA dehydrogenase, putative [Deinococcus gobiensis I-0]
Length = 452
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 210/360 (58%), Gaps = 4/360 (1%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ P +D++ D L+ +E+AV + M +APIM EYW + EFP H+IP+L L
Sbjct: 61 ELPAPDADFFGQLDGLSDDERAVAATTKAFMHDHVAPIMNEYWNRDEFPRHLIPELRKLD 120
Query: 100 VAGGTIKGYGC--PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G P +V I + E +VD S + F VH+ LA +IAL GS EQK
Sbjct: 121 LLRKVWNEDGSRKPNATVVEGLITM-EACKVDVSTAVFFGVHAGLAFASIALGGSAEQKA 179
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
++LP + L I + LTEP GS S + TT + GW L G+K+WIGNSTF+D V
Sbjct: 180 EWLPKMMDLEAIGAFGLTEPEGGSQVSQGMRTTCKRDGDGWTLRGEKKWIGNSTFSDFTV 239
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
I+AR+ T ++ G++V+ PG V KIE K LRIV+NG I L VPD DRL V
Sbjct: 240 IWARDVDTQEVRGFIVRAGTPGYEVKKIEGKTALRIVENGQITLTDCRVPDTDRLQEVRG 299
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
++ T++VL ++R VAWQ +G +MG Y++ Y + R+QFG + FQ+ Q LV MLGN
Sbjct: 300 WRTTAEVLKLTRAGVAWQGVGCAMGAYELALAYAQNREQFGKRIGEFQLIQNHLVHMLGN 359
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ M+ RL + + G M HA+L K AR RETVAL RE LGGNGIL + VAK
Sbjct: 360 VTGMLATVLRLSHMADAGEMRDEHAALAKVVTAARCRETVALARETLGGNGILLENGVAK 419
>gi|386352884|ref|YP_006051131.1| acyl-CoA dehydrogenase domain protein [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365810963|gb|AEW99178.1| acyl-CoA dehydrogenase domain protein [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 387
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 216/355 (60%), Gaps = 7/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ D+LT++E+A +VR+ +++E+ P E W E P H+ ++ L + G
Sbjct: 3 ADFFHIRDVLTADERATLERVRDFLDREVRPGANERWAAEESPLHLRDRIRELNITGTYA 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
S + E+ARVD S +TF VH L M +I CGS+EQK+++LPS+ +
Sbjct: 63 DDPSVAPRSYLLTGMIGMEMARVDPSFATFFGVHGGLGMGSIRECGSDEQKERWLPSMVR 122
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I + LTEP GS A L TTA + W+L G+K+WIGN+TFAD++VI+AR+
Sbjct: 123 WERIGAFGLTEPLVGSGTAGGLTTTARREGDTWVLNGEKKWIGNATFADLVVIWARDEAD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
NQ+ G++V++ PG T ++ KI LR V N I+L V VP+E+RL NSF+DT++VL
Sbjct: 183 NQVKGFVVEQGTPGFTPERLRQKISLRGVHNAHIVLDDVRVPEENRLQRANSFRDTARVL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI---QAMI 341
+R VAW G +MG Y+ Y ER+QFG P+ FQ+ Q L +MLGNI QAM+
Sbjct: 243 KTTRGGVAWSATGCAMGAYEAARAYAVEREQFGRPIGGFQLVQDLLSRMLGNITACQAMV 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L+++ + A+L K + T R RETVA RE+ GGNGIL ++ VA+
Sbjct: 303 M---RMAELHDQDKLNDAQAALAKMFCTTRMRETVAWAREVFGGNGILLEYDVAR 354
>gi|357408123|ref|YP_004920046.1| acyl-CoA oxidase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337763072|emb|CCB71780.1| Acyl-coenzyme A oxidase 4, peroxisomal [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 399
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 216/355 (60%), Gaps = 7/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ D+LT++E+A +VR+ +++E+ P E W E P H+ ++ L + G
Sbjct: 15 ADFFHIRDVLTADERATLERVRDFLDREVRPGANERWAAEESPLHLRDRIRELNITGTYA 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
S + E+ARVD S +TF VH L M +I CGS+EQK+++LPS+ +
Sbjct: 75 DDPSVAPRSYLLTGMIGMEMARVDPSFATFFGVHGGLGMGSIRECGSDEQKERWLPSMVR 134
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I + LTEP GS A L TTA + W+L G+K+WIGN+TFAD++VI+AR+
Sbjct: 135 WERIGAFGLTEPLVGSGTAGGLTTTARREGDTWVLNGEKKWIGNATFADLVVIWARDEAD 194
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
NQ+ G++V++ PG T ++ KI LR V N I+L V VP+E+RL NSF+DT++VL
Sbjct: 195 NQVKGFVVEQGTPGFTPERLRQKISLRGVHNAHIVLDDVRVPEENRLQRANSFRDTARVL 254
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI---QAMI 341
+R VAW G +MG Y+ Y ER+QFG P+ FQ+ Q L +MLGNI QAM+
Sbjct: 255 KTTRGGVAWSATGCAMGAYEAARAYAVEREQFGRPIGGFQLVQDLLSRMLGNITACQAMV 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L+++ + A+L K + T R RETVA RE+ GGNGIL ++ VA+
Sbjct: 315 M---RMAELHDQDKLNDAQAALAKMFCTTRMRETVAWAREVFGGNGILLEYDVAR 366
>gi|452911620|ref|ZP_21960287.1| Glutaryl-CoA dehydrogenase [Kocuria palustris PEL]
gi|452833257|gb|EME36071.1| Glutaryl-CoA dehydrogenase [Kocuria palustris PEL]
Length = 393
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 211/354 (59%), Gaps = 6/354 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D L ++Q ++RE ++ EI P AE+W + EF + K G + G +
Sbjct: 14 ADLLDHRSALPQDQQRRLRELREFLDAEIRPHTAEHWSRDEFAPELAAKCGEFGL--GDL 71
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ P AE+AR D S S ++ +HS L M T+ GSEEQKQ++LP + +
Sbjct: 72 R---SPDTDSVFRGFVAAELARADISISVYLALHSDLVMATLDELGSEEQKQQWLPPMRR 128
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ALTEP +GSD A L TTA + W+L G KRWIGN T A + +++AR+
Sbjct: 129 MEFTGCFALTEPDHGSDVAGGLATTARRDGDHWVLNGTKRWIGNGTIARIAIVWARDEAD 188
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
Q+ G++V+ D PG T TKIE+KI ++IVQN DI L+ V +P + LPG +SF+DT+ +L
Sbjct: 189 GQVKGFIVETDTPGFTATKIEHKIAVKIVQNADITLEDVRIPASNHLPGTSSFRDTNVIL 248
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
SR +AWQ +G M ++D+ RY ER+QFG PLA FQ+ Q LV++ N A + +
Sbjct: 249 EQSRAGLAWQSVGAQMAIFDVARRYALERRQFGRPLAGFQLTQDHLVRIAANTTASVGIA 308
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
R+ +L +G T G A++ K + ARE+ ALGR+L+GGNGIL D + K+
Sbjct: 309 HRMSQLRAQGTATMGQAAIAKLKTSQMARESAALGRQLMGGNGILVDREMGKIF 362
>gi|379057099|ref|ZP_09847625.1| acyl-CoA dehydrogenase domain-containing protein [Serinicoccus
profundi MCCC 1A05965]
Length = 404
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 215/353 (60%), Gaps = 3/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ DDLL+ E+ +R +R ++E+ P E+WE A FP ++P A RVAG I
Sbjct: 20 TDFFGLDDLLSERERELRDGLRAWCDEEVVPRAQEWWEAARFPAEMVPGYAATRVAGAAI 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S + AE+AR D S +TF VHS LAM + L GSEEQ++++LP +A+
Sbjct: 80 QGYGCAGVSAVAEGMMCAELARGDGSIATFNAVHSGLAMTAVHLLGSEEQRERWLPGMAR 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ T+ ALTEP +GSD +L TTA + W+L+G KRWIGN + D++V++AR+ +
Sbjct: 140 VETVGAVALTEPTHGSDVVSLETTARRDGDHWVLDGAKRWIGNGSVCDLVVVWARDEAGD 199
Query: 226 QINGYLVK--KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G++V+ + A G IE KI R V I L V VP + RL +F DT++V
Sbjct: 200 -VGGFVVEDPQQADGWDAQVIEGKISNRGVWQAHIRLDGVRVPADSRLAQARTFADTNRV 258
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
LA SR VAW+ IG ++ Y+ Y R+QFG PLA Q+ Q L +M+ I +M L+
Sbjct: 259 LARSRQTVAWEAIGHAVAAYEGALTYALRREQFGRPLAKNQLIQDDLARMVTLITSMQLM 318
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G T HA++ K T ARE VA+ R+LLGGNGIL D VA+
Sbjct: 319 CTRMSQLEDQGRCTIEHAAMAKLHTTTAAREVVAIARDLLGGNGILLDHHVAR 371
>gi|318058840|ref|ZP_07977563.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
gi|318080468|ref|ZP_07987800.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
Length = 399
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 212/359 (59%), Gaps = 1/359 (0%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S+ D++ DLL EE+ + +VRE + E+AP E WE P + ++ L
Sbjct: 8 SEAGAVEGDFFGIVDLLDGEERKLLDRVREFLRAEVAPHANELWEAGRSPVSLRGRIAEL 67
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G G P S + E+ARVD S +TF VH+ LAM ++ CGSEEQK +
Sbjct: 68 GITGEEGDDAGVPARSSLFRGLLGMEMARVDPSFATFFGVHAELAMGSVRACGSEEQKAR 127
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVI 217
+LP++ + + +ALTEP GS +A TT + EG W+L+G+K+WIGN +FAD+LV+
Sbjct: 128 WLPAMTRWEKLGAFALTEPLVGSGTAAGLTTTARREGDTWVLDGEKKWIGNGSFADLLVV 187
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ +Q+ G++V+ A GL+ I +KI LR VQN + L V VP+ DRL SF
Sbjct: 188 WARDVADDQVKGFVVEHGAAGLSADVIPHKIALRGVQNAHLALDGVRVPEADRLQHAESF 247
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
DT++VL V+R VAW G ++G Y+ Y ER+QFG P+ +FQ+ Q L +ML +I
Sbjct: 248 ADTNRVLRVTRAAVAWTATGCALGAYEAARAYAVEREQFGRPIGSFQLVQDNLARMLADI 307
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
A + RL L EKG ++ A+L K + T R RETVA RE+LGGNGIL D A+
Sbjct: 308 TACQSLAVRLAALEEKGELSDAQAALTKMFCTTRMRETVARAREVLGGNGILLDHDAAR 366
>gi|403337417|gb|EJY67922.1| Acyl-CoA dehydrogenase, putative [Oxytricha trifallax]
Length = 422
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 224/368 (60%), Gaps = 4/368 (1%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
+ P +F C ++ + ++L++ + + + V + M +EI P + EY K E P ++
Sbjct: 27 REAPKPQFTSCW-EHLRCNELISEKGRTFKDLVEKLM-REINPQLNEYINKTEMPHFIVD 84
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
K L+V G KG+G P ++ E+AR DAS +T+ +V + L + + CG E
Sbjct: 85 KFKELKVNGLDAKGFGSPELNIVDTGSIFYELARWDASVATYFIVSNCLGIAVVERCGGE 144
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
+QK++ LP Q+ C+ LTEP GSDA+ L +TA KVEGG++L G KRWIGN+TFAD
Sbjct: 145 DQKKRILPDCIQMKKSICFGLTEPTNGSDATGLLSTAKKVEGGYLLNGFKRWIGNATFAD 204
Query: 214 VLVIFARNTTT-NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
++I+ARN N+I G++V + + GL +KIENK +R+VQN DI +K VFVPD +RL
Sbjct: 205 YIIIWARNIDEGNKIQGFVVDQGSKGLKTSKIENKYSIRMVQNADIEMKDVFVPDNNRLE 264
Query: 273 GVNSF-QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
F + +L SR+ VAW GI+ G + H+Y ERKQFG P+A FQ+NQ+KL
Sbjct: 265 KALDFGTGANNILKHSRIQVAWVATGIAAGAIEAAHKYALERKQFGKPIAGFQVNQEKLA 324
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
+ + ++ +MIL+ R+ +Y++G T GH ++ K++ T AR A REL GGNGI+ D
Sbjct: 325 RAISDVNSMILMCHRVSLMYQRGKATMGHIAMTKAYCTRVARGVCAAARELCGGNGIILD 384
Query: 392 FLVAKVIM 399
V K M
Sbjct: 385 NHVMKQFM 392
>gi|163849367|ref|YP_001637411.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|163670656|gb|ABY37022.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
J-10-fl]
Length = 442
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 212/359 (59%), Gaps = 2/359 (0%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ PP SD+Y L+ EE+A++ K+R ME+ + P+ YWE+ EFP ++P L
Sbjct: 51 RVPPINSDFYDILADLSPEERAIQQKIRTYMEERVRPLANTYWERGEFPHEIVPGFAHLI 110
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ Y IA E+ARVD S TF VH L M +I L GS EQKQ++
Sbjct: 111 AETFGTRPYKIDALGPVLTGIACMELARVDPSIYTFFGVHWGLCMGSIDLFGSPEQKQRW 170
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIF 218
LP + + I WALTEP GS +A TT + E G W+L+G K+W GN+ AD+ +I+
Sbjct: 171 LPPMQRFELIGSWALTEPDVGSATAAGLTTTARFERGVWVLDGAKKWSGNAPIADINIIW 230
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ + NQ+ G++V++ PG V ++E KI LR VQN +I L VP+ +RLP V F+
Sbjct: 231 ARDVSNNQVQGFIVERGTPGYEVERLEGKIALRTVQNANIRLNGCRVPEANRLPNVGGFR 290
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
++ LA++R VAW G++MG Y+ Y ++R QFG P+ FQ+ Q LVQML N+
Sbjct: 291 GIARQLAITRAAVAWAMTGVAMGAYERALAYAQQRIQFGRPIGGFQLVQNSLVQMLANVT 350
Query: 339 AMILVGWRLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
AM + R+ ++ + G ++ ASL K + + RETVAL R +LGGNGIL + VA+
Sbjct: 351 AMQTMCLRMSQIAARTGKVSQEQASLAKVFCGEKMRETVALARAVLGGNGILLEHEVAR 409
>gi|302522485|ref|ZP_07274827.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
gi|302431380|gb|EFL03196.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
Length = 435
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 209/351 (59%), Gaps = 1/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D++ DLL EE+ + +VRE + E+AP E WE P + ++ L + G
Sbjct: 52 DFFGIVDLLDGEERKLLDRVREFLRAEVAPHANELWEAGRSPVSLRGRIAELGITGEEGD 111
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
G P S + E+ARVD S +TF VH+ LAM ++ CGSEEQK ++LP++ +
Sbjct: 112 DAGVPARSSLFRGLLGMEMARVDPSFATFFGVHAELAMGSVRACGSEEQKARWLPAMTRW 171
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ +ALTEP GS +A TT + EG W+L+G+K+WIGN +FAD+LV++AR+ +
Sbjct: 172 EKLGAFALTEPLVGSGTAAGLTTTARREGDTWVLDGEKKWIGNGSFADLLVVWARDVADD 231
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
Q+ G++V+ A GL+ I +KI LR VQN + L V VP+ DRL SF DT++VL
Sbjct: 232 QVKGFVVEHGAAGLSADVIPHKIALRGVQNAHLALDGVRVPETDRLQHAESFADTNRVLR 291
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
V+R VAW G ++G Y+ Y ER+QFG P+ +FQ+ Q L +ML +I A +
Sbjct: 292 VTRAAVAWTATGCALGAYEAARAYAVEREQFGRPIGSFQLVQDNLARMLADITACQSLAV 351
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL L EK ++ A+L K + T R RETVA RE+LGGNGIL D A+
Sbjct: 352 RLAALEEKDELSDAQAALAKMFCTTRMRETVARAREVLGGNGILLDHDAAR 402
>gi|15805578|ref|NP_294274.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
gi|6458244|gb|AAF10130.1|AE001913_4 glutaryl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
Length = 414
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 204/358 (56%), Gaps = 2/358 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P DYY + D LT + V +V + M E+ PIM EYW + EFP +I K+ L +
Sbjct: 24 LPAADGDYYDYLDTLTDSQVEVAGRVHDFMRAEVMPIMNEYWSRDEFPRDLIGKMRELNL 83
Query: 101 AGGTIKGYGCPGHSVTG-AAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G T + I E RVD S + F VH LA +IAL EEQK+++
Sbjct: 84 LRSIWNEDGTRKPDATLIEGVVILEACRVDVSTAVFFGVHGGLATASIALGSDEEQKKRW 143
Query: 160 LPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP + + I + LTEP GS S + TT + GW+L G+K+WIGNSTF+D VI+
Sbjct: 144 LPDMLDMKKIGAFGLTEPEGGSQVSEGMRTTCRRDGDGWVLNGEKKWIGNSTFSDFTVIW 203
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ TN++ G++V+ PG V KI+ KI LR+V+NG I LK V D +RL V ++
Sbjct: 204 ARDEETNEVRGFVVEAGTPGYDVEKIQGKIALRMVENGHITLKDCRVADANRLQAVQGWE 263
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
S+VL ++R VAWQ +G +MG Y++ Y + RKQFG + FQ+ Q L ML ++
Sbjct: 264 TVSQVLKLTRAGVAWQGVGCAMGAYELALAYTQTRKQFGKRIGEFQLIQSHLTHMLADVT 323
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
AM+ + RL + ++G M HA+L K AR RE VA RE+ GGNGIL + VAK
Sbjct: 324 AMLGMVMRLSHIADEGRMDDAHAALAKVHTAARCREVVARAREVFGGNGILLEHGVAK 381
>gi|325284732|ref|YP_004264195.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
gi|324316221|gb|ADY27335.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
Length = 452
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 210/360 (58%), Gaps = 4/360 (1%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+ P D+Y + D LT + V +V M E+ P+M EYW + EFP +I K+ L
Sbjct: 61 ELPAADGDFYDYLDTLTDAQVEVAGRVHAFMRAEVMPVMNEYWSRDEFPRDLIGKMRELN 120
Query: 100 V--AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ A G P ++ I + E RVD S + F VH LA +IAL GSEEQK+
Sbjct: 121 LLRAIWNEDGTRRPDATIMEGIITL-EACRVDVSTAVFFGVHGGLAFASIALGGSEEQKK 179
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
++LP + + I + LTEP GS S + TT + GW+L G+K+WIGNSTF+D V
Sbjct: 180 RWLPDMLDMRRIGAFGLTEPEGGSQVSEGMRTTCRRDGDGWVLNGEKKWIGNSTFSDFTV 239
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
I+AR+ T+++ G++V+ PG +V KI+ KI LR+V+NG I L+ V DE RL V
Sbjct: 240 IWARDEETSEVRGFVVEAGTPGYSVEKIQGKIALRMVENGHITLQDCRVADEFRLQAVQG 299
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ S VL ++R VAWQ +G +MG Y++ Y ++RKQFG + FQ+ Q LV ML +
Sbjct: 300 WDTVSDVLKLTRAGVAWQGVGCAMGAYELALAYAQQRKQFGKRIGEFQLVQNHLVLMLAD 359
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ AM+ + RL L ++G M HA+L K AR RE VA RE+ GGNGIL + VAK
Sbjct: 360 VTAMLGMVTRLSHLADEGRMDDAHAALAKVHTAARCREVVARAREVFGGNGILLEHGVAK 419
>gi|25027279|ref|NP_737333.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|259506584|ref|ZP_05749486.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|23492560|dbj|BAC17533.1| putative glutaryl-CoA dehydrogenase precursor [Corynebacterium
efficiens YS-314]
gi|259165782|gb|EEW50336.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
Length = 410
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 219/371 (59%), Gaps = 8/371 (2%)
Query: 33 PQATPASKFPPCAS--DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH 90
P +PA+ PP D+ D L++E+ A+R ++R ++ I PI+ EYWE+AEFP
Sbjct: 4 PTLSPAT-VPPVTEHPDFLLLDSDLSAEDIALRDRIRAFGQEHILPIINEYWERAEFPME 62
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
V+ L L + G I+GYGCPG S A I E+ R+D S +TF VHS+L M I
Sbjct: 63 VLEPLADLGIVGTFIQGYGCPGLSRQAAGIVARELGRIDGSVNTFFGVHSNLGMGAIYTL 122
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
G+EEQ+Q++LP +A+L I +ALTEP +GSD+ AL T+A + W+L G KRWIGN
Sbjct: 123 GNEEQRQRWLPDMAKLKKIGAFALTEPNHGSDSVALETSARREGDHWVLNGHKRWIGNGH 182
Query: 211 FADVLVIFARNTTTNQINGYLVKKDA-----PGLTVTKIENKIGLRIVQNGDILLKKVFV 265
ADV+V+FAR+ + ++V+K+ G I K+G R + GDI++ + V
Sbjct: 183 AADVIVVFARDEADGNVKAFVVEKNEDGTYPEGYQPEVITGKVGKRAILQGDIVIDNLRV 242
Query: 266 PDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQI 325
P E+RL SF ++VL+ +R +W+ +G M +++ +Y R+QFGAP+A +Q+
Sbjct: 243 PVENRLENCESFAGVNRVLSATRGGASWEAVGHGMAAFELASQYALSREQFGAPIAGYQL 302
Query: 326 NQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGG 385
Q+KL ML ++ M L+ R+ +L E+G T A++ K + +A R++ GG
Sbjct: 303 VQEKLATMLSDVTQMQLLCTRMAQLQERGEFTGSMAAMIKMVTSRKALAACREARDMFGG 362
Query: 386 NGILSDFLVAK 396
NG+L + +A+
Sbjct: 363 NGLLLENHIAR 373
>gi|62321589|dbj|BAD95143.1| Short-chain acyl CoA oxidase [Arabidopsis thaliana]
Length = 185
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/145 (87%), Positives = 139/145 (95%)
Query: 252 IVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 311
+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMG+YDMCHRYLK
Sbjct: 1 MVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLK 60
Query: 312 ERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITAR 371
ERKQFGAPLAAFQ+NQQKLVQMLGN+QAM L+GWRLCKLYE G MTPG ASLGK+WI+++
Sbjct: 61 ERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSK 120
Query: 372 ARETVALGRELLGGNGILSDFLVAK 396
ARET +LGRELLGGNGIL+DFLVAK
Sbjct: 121 ARETASLGRELLGGNGILADFLVAK 145
>gi|359775530|ref|ZP_09278857.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359306989|dbj|GAB12686.1| putative acyl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 388
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 218/381 (57%), Gaps = 10/381 (2%)
Query: 42 PPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
PP A +D DLL E+ +++R+ ++ + EYW + EFPF ++ +LG
Sbjct: 4 PPFADADLMYVADLLPPAERTRYLEIRDFLQSRVRAQSIEYWNREEFPFGLLAELGK--- 60
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
+ G G S + E+AR D S S + +H+ L + I GS+EQKQ++L
Sbjct: 61 --HGLGGLQTDGTSTLFKGLMYVEVARADVSLSALVGIHNELIVGMIDALGSDEQKQRWL 118
Query: 161 PSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P L + +ALTEP +GSD A L TTA +G W+++G KRWIG T AD +++A
Sbjct: 119 PGLTAFTQLGAFALTEPEHGSDIAGGLATTARFEDGEWVIDGAKRWIGAGTIADFALVWA 178
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+T +QI G++V+ D PG T TKI NKIGLRI+QN DI L V +P+ LPG F
Sbjct: 179 RDTADHQIKGFIVETDRPGYTATKISNKIGLRIMQNADIRLDGVRIPETSMLPGATDFTK 238
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+++L SR V WQ GI + +D+ Y +R+QFG LA FQ+ QQ+L ++LGN A
Sbjct: 239 ANELLRDSRAWVGWQAAGIQLAAFDVARSYSLQRRQFGKELARFQLIQQQLAEILGNASA 298
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI- 398
+ + +L ++ E G + A++ K+ T AR +VA+GR LLGGNGI SDF + K+
Sbjct: 299 SLALMAQLARIQEDGRLEMAQAAMAKATTTRLARASVAMGRSLLGGNGISSDFEMGKLFG 358
Query: 399 --MLFFLHLDHFVCKNLIVSN 417
+ + + + +LIV+
Sbjct: 359 DAEILYTYEGSYEINSLIVAR 379
>gi|295835969|ref|ZP_06822902.1| acyl-coenzyme A oxidase 4 [Streptomyces sp. SPB74]
gi|295825806|gb|EFG64494.1| acyl-coenzyme A oxidase 4 [Streptomyces sp. SPB74]
Length = 402
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 213/359 (59%), Gaps = 1/359 (0%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S+ D++ DLL EE+ + +VRE + E+AP E WE P + ++ L
Sbjct: 11 SEAGAVEGDFFGIVDLLDGEERKLLERVREFLRAEVAPHANELWEAGRSPVSLRGRIAGL 70
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G G P + E+ARVD S +TF VH+ LAM ++ CGSEEQK +
Sbjct: 71 GITGEEGDDAGVPARGSLFRGLLGMEMARVDPSFATFFGVHAELAMGSVRACGSEEQKAR 130
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVI 217
+LP++ + + +ALTEP GS +A TT + EG W+L+G+K+WIGN +FAD+LV+
Sbjct: 131 WLPAMTRWEKLGAFALTEPLVGSTTAAGLTTTARREGDTWMLDGEKKWIGNGSFADLLVV 190
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ +Q+ G++V+ A GL+ I +KI LR VQN ++L V VP+ DRL SF
Sbjct: 191 WARDVADDQVKGFVVEHGAEGLSAEVIPHKIALRGVQNAHLVLDGVRVPEADRLERAESF 250
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
DT++VL V+R VAW G ++G Y+ Y ER+QFG P+A+FQ+ Q L +ML +I
Sbjct: 251 ADTNRVLRVTRAAVAWTATGCALGAYEAARAYAVEREQFGRPIASFQLVQDNLARMLADI 310
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
A + RL L EK ++ A+L K + T+R RETVA RE++GGNGIL D A+
Sbjct: 311 TACQALAVRLAALEEKDELSDAQAALAKMFCTSRMRETVARAREVMGGNGILLDHDAAR 369
>gi|325002463|ref|ZP_08123575.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
Length = 400
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 210/362 (58%), Gaps = 1/362 (0%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
TP ++ +D++ D T E+ VR ++ E+ + YWE+AE P+++ +
Sbjct: 6 TPYTELGEALGTDFFSVRDQFTDEQWQRFTDVRRFVDTEVLDEINGYWERAELPWNLFRR 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
L L + G I G+G S + E+ R D S TF+ VH+ LAM + +CGSEE
Sbjct: 66 LPELGIVGEDITGHGAAAMSPLALGLVHMELHRGDGSLGTFLGVHAGLAMKAVDMCGSEE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LPS++ L +ALTEP +GSD+ AL TTAT+ WIL G KRWIGN + AD+
Sbjct: 126 QKQRWLPSMSTLERTGAFALTEPDHGSDSVALETTATRDGDHWILNGTKRWIGNGSVADL 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
++++AR+T + + G++V+ A G T T I K+ LR + DI L V VPD+ RL
Sbjct: 186 VIVWARDTGSGDVLGFVVETPAEGYTATVIPGKVSLRALWQADITLDGVRVPDDARLAHA 245
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+F D + VLA +R AW +G + YD RY ER QFG PLA+FQI QQ+LV+ML
Sbjct: 246 RTFADCAAVLATTRSTCAWMALGHATAGYDAALRYATERHQFGKPLASFQIVQQRLVRML 305
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
++ M L + +L E G ++P A L K T AR ++ R+LLGGNGIL + V
Sbjct: 306 ADLTGMQLYCMQTARLAEAGKLSPTVAGLAKMHNTRTARSILSEARDLLGGNGILLEHHV 365
Query: 395 AK 396
+
Sbjct: 366 VR 367
>gi|145506689|ref|XP_001439305.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406489|emb|CAK71908.1| unnamed protein product [Paramecium tetraurelia]
Length = 404
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 212/354 (59%), Gaps = 4/354 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
+Y DLLT EE VR V ++KE+AP + +Y E A+FP ++ + L++ +
Sbjct: 22 EYLSLYDLLTPEELEVRKAVEAFVQKEVAPKINDYVEAAQFPTEIVNAVKPLKLFHHFLN 81
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
K YG G S T + + E AR DA +TFI V + L T+ G+ QKQKYL
Sbjct: 82 KPYGH-GTSYTKQGVILMEAARADAGFATFIAVQNLLLNYTLEKFGNATQKQKYLTKTRD 140
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ I W LTE YGSDAS+L KV+GG+IL G KRWIGN DVL+++ARN TN
Sbjct: 141 VEYIGGWGLTERGYGSDASSLTANVKKVQGGYILNGDKRWIGNGN-KDVLIVWARNLDTN 199
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD-TSKVL 284
++ G++V+ PG I+ K+ LRIVQN I +F+PDE++L V FQ+ ++VL
Sbjct: 200 KVEGFIVETKWPGYHAEVIQGKLALRIVQNCQITFTNIFIPDENKLESVTDFQNGPNQVL 259
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
SRV+V W +G+ GVY+ ++ RKQFG LA+FQ+ Q++LV++L QA L+
Sbjct: 260 MHSRVIVPWIALGVMRGVYEHSLKWTTSRKQFGKYLASFQLQQERLVRILSTFQASFLMV 319
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL +L +G T G S K+W+T + RE LGRE+LGG+GI+SD V K +
Sbjct: 320 LRLSRLAAEGKATIGMISSVKAWVTDKTREVARLGREMLGGDGIISDNYVIKAL 373
>gi|338973532|ref|ZP_08628895.1| glutaryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233127|gb|EGP08254.1| glutaryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
Length = 386
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 211/354 (59%), Gaps = 7/354 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD+Y F LLT +EQ KVR E +IAP + W AEF F ++P AL +
Sbjct: 8 SDFYNFQSLLTEQEQQTVAKVRRFFEDKIAPRANDAWASAEFQFDLVPGFAALDIVKLPD 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+G S+ IA+ E++RVD S STF VHS LA +I GS K+ LP++ +
Sbjct: 68 EG----ARSLLTGWIAL-EMSRVDPSHSTFYGVHSGLATGSIRTFGSNYLKKNVLPAMIR 122
Query: 166 LNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I +ALTEP GSD S + T A + GWIL G KRWIGN TFAD +V++AR+
Sbjct: 123 MEKIGAFALTEPEGGSDVSGGMRTVARRDGDGWILNGAKRWIGNGTFADYVVVWARDEAD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N++ G++V+K + G + TKIE K+ LR VQN DI+L +VP +L F+DT+++L
Sbjct: 183 NKVKGFVVEKGSAGFSATKIERKMALRTVQNADIILTDCYVPLTHQLTS-KGFRDTAELL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R VAW +GI MG Y+ Y K RKQFG P+A++Q+ Q LV+MLGNI + +
Sbjct: 242 RRTRAGVAWSSVGIMMGAYEHALAYTKTRKQFGKPIASYQLVQDLLVRMLGNITTCLGLV 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
RL + ++G H++L K+ T R RE V RELLGGNGI+ D+ + + +
Sbjct: 302 VRLAQAQDEGVYRDEHSALAKATCTYRMREVVGWARELLGGNGIVLDYNIGRFV 355
>gi|443673810|ref|ZP_21138858.1| Glutaryl-CoA dehydrogenase [Rhodococcus sp. AW25M09]
gi|443413633|emb|CCQ17196.1| Glutaryl-CoA dehydrogenase [Rhodococcus sp. AW25M09]
Length = 401
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 211/348 (60%), Gaps = 7/348 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD++ + +L +E V ++ R ++ E+AP E+WEKA P H++P++ L +AG
Sbjct: 17 SDFFGYQGMLDDDEIEVVLRTRRFLQDEVAPRANEFWEKAVSPVHLMPQIAELEIAG--- 73
Query: 106 KGYGCPGHSVTGAAIA---IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
GY + + E ARVD S T VHSSLAM +I++ GS+EQ+ ++LP+
Sbjct: 74 LGYAFDDRKASRKLLTGWLEMEFARVDPSTGTMFSVHSSLAMSSISILGSDEQRARWLPA 133
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+ ++ TI + L+EP GSD A L TTA WIL G KRWIGN+TFAD+ ++FA++
Sbjct: 134 MRRMETIGAFGLSEPHGGSDVAGGLETTARLDGDHWILNGSKRWIGNATFADLTIVFAKD 193
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G++V+K+ G KIE K LR V+N D+ L+ VP ++L NSF DT+
Sbjct: 194 EADGEVKGFVVEKEFEGFRADKIEGKYSLRAVENADVHLENCRVPVANKLADANSFADTA 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVL ++R VA+Q +G+ MG Y+ Y +ER+QFGAP+A+FQ+ + +M NI A +
Sbjct: 254 KVLRLTRGGVAFQAVGVMMGAYERAVAYAREREQFGAPIASFQLISDLIARMTANITASL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
+ R+ +L G HA+L K++ T R RE V RE++GGNGIL
Sbjct: 314 GMAIRVAQLQGNGIHHDEHAALAKTFCTTRLREVVGWAREIMGGNGIL 361
>gi|403373032|gb|EJY86428.1| Glutaryl-CoA dehydrogenase [Oxytricha trifallax]
Length = 428
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 210/368 (57%), Gaps = 28/368 (7%)
Query: 50 QFDDLLTSEEQAVRMKVR---ECMEKEIAPIMAEYWEKAEFPFHV--------------I 92
FD L+ ++ A+R KVR E +EK++ P+ PFH +
Sbjct: 40 HFDQYLSEDKIALRKKVRTFMESIEKDVLPL----------PFHFNYQTLVNSIHKLNSV 89
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
PK+ L + G IK +G PG + + I EIA+VD S TF++VH+ + M I GS
Sbjct: 90 PKMAQLGINGLMIKDFGGPGFTNVESWAMIYEIAKVDMSVCTFLMVHNCIGMSVINYLGS 149
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQ+ + LP +L I + LTEP YGSDAS+L T+A KVEGG+IL GQKRWIGN TFA
Sbjct: 150 EEQRARLLPECIKLEKICSFGLTEPDYGSDASSLRTSAKKVEGGYILNGQKRWIGNGTFA 209
Query: 213 DVLVIFARNTTT-NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
D ++++ARN N+I ++V K + GLT KIENK LRI QN D+ L VFVPD RL
Sbjct: 210 DYIIVWARNEADGNRIQAFVVTKGSKGLTTKKIENKYALRITQNADVYLDGVFVPDNMRL 269
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
F +++L SR+ VAW + G Y+ +Y RKQFG P+A FQ Q KL
Sbjct: 270 EKAKDFSSANQILEHSRIGVAWFGAALGAGAYEAALKYALSRKQFGKPIAQFQATQLKLS 329
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
+ML + M+ + R+ +L ++G T G K+ + RE ++ RE++GGNGIL +
Sbjct: 330 KMLAQCEMMMSLCMRVSQLVDQGKTTIGQIGRAKAICSLTCREVISQAREIMGGNGILLE 389
Query: 392 FLVAKVIM 399
V K ++
Sbjct: 390 NRVIKHML 397
>gi|25026880|ref|NP_736934.1| acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|23492160|dbj|BAC17134.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
Length = 432
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 212/356 (59%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DY D T E+ +R +VR ++ I PI+ +YWE+AEFP+ ++ L L +AG I
Sbjct: 40 ADYLLLDADFTQGERVLRDQVRAFGKEHILPIINDYWERAEFPYEILEPLAGLGLAGTVI 99
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGCPG S I E+ R+D S TF VHS L+M +I + GSEEQ++++LP +A+
Sbjct: 100 KGYGCPGLSRLENGIVSRELGRIDGSICTFFGVHSGLSMGSINILGSEEQRRRWLPDMAK 159
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ALTEP +GSD+ +L T+A + W+L G KRWIGN D++V++AR+
Sbjct: 160 FRKTGAFALTEPNHGSDSVSLETSARREGDSWVLNGHKRWIGNGHAGDIIVVYARDEADQ 219
Query: 226 QINGYLVKKD-----APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
Q+ ++V+K PG I K G R + GDI++ + +P+E+RL +SF+D
Sbjct: 220 QVKAFVVEKQRNGEYPPGYRAEVITGKTGKRAILQGDIVIDNLRIPEENRLTNCHSFKDV 279
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
++VLA +R VAW+ G +M +++ +Y +R QFG+P+A++Q+ Q KL ML ++
Sbjct: 280 NRVLAATRGGVAWESTGHAMAGFELAAQYALQRHQFGSPIASYQLVQTKLAHMLADVVEN 339
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ R+ +L E+G + ASL K A R+++GGNG+L + +A+
Sbjct: 340 QLLCVRMAELQERGEFSTPMASLTKMTTAKNALSICREARDMMGGNGLLLNNHIAR 395
>gi|259506057|ref|ZP_05748959.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|259166345|gb|EEW50899.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
Length = 408
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 212/356 (59%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DY D T E+ +R +VR ++ I PI+ +YWE+AEFP+ ++ L L +AG I
Sbjct: 16 ADYLLLDADFTQGERVLRDQVRAFGKEHILPIINDYWERAEFPYEILEPLAGLGLAGTVI 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGCPG S I E+ R+D S TF VHS L+M +I + GSEEQ++++LP +A+
Sbjct: 76 KGYGCPGLSRLENGIVSRELGRIDGSICTFFGVHSGLSMGSINILGSEEQRRRWLPDMAK 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ALTEP +GSD+ +L T+A + W+L G KRWIGN D++V++AR+
Sbjct: 136 FRKTGAFALTEPNHGSDSVSLETSARREGDSWVLNGHKRWIGNGHAGDIIVVYARDEADQ 195
Query: 226 QINGYLVKKD-----APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
Q+ ++V+K PG I K G R + GDI++ + +P+E+RL +SF+D
Sbjct: 196 QVKAFVVEKQRNGEYPPGYRAEVITGKTGKRAILQGDIVIDNLRIPEENRLTNCHSFKDV 255
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
++VLA +R VAW+ G +M +++ +Y +R QFG+P+A++Q+ Q KL ML ++
Sbjct: 256 NRVLAATRGGVAWESTGHAMAGFELAAQYALQRHQFGSPIASYQLVQTKLAHMLADVVEN 315
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ R+ +L E+G + ASL K A R+++GGNG+L + +A+
Sbjct: 316 QLLCVRMAELQERGEFSTPMASLTKMTTAKNALSICREARDMMGGNGLLLNNHIAR 371
>gi|88855626|ref|ZP_01130289.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
PHSC20C1]
gi|88814950|gb|EAR24809.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
PHSC20C1]
Length = 394
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 222/368 (60%), Gaps = 21/368 (5%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH---VIPKLGA 97
F +SD+Y +++ LT +E+ +K+R ++KE+ PI + W KAEF F+ V+ L
Sbjct: 3 FETLSSDFYGYENALTDQEKGTIVKLRAFLDKEVRPIANDLWAKAEF-FNRDVVVKGLAD 61
Query: 98 LRVAGGTIKGYGCP--------GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
L + +G P +V IA+ E+ARVDAS +T + + + L M +I +
Sbjct: 62 LGL-------FGLPWAETQPFKNSAVFRGWIAL-ELARVDASAATLVGMQNGLVMGSIGV 113
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGN 208
GSEEQ+ ++LP A + + LTEP GSD A L T A + WI+ G KRWIGN
Sbjct: 114 AGSEEQRAEWLPKFASGELLGAFGLTEPLSGSDTAQGLQTVAKRDGDNWIINGAKRWIGN 173
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
+ +DV +I+AR+ NQ+ G++V PG + T+IENK LRIVQN DI+L+ V VP+
Sbjct: 174 GSISDVTIIWARDEADNQVKGFIVPTSTPGYSATRIENKQALRIVQNADIVLENVVVPET 233
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+RL SF++T+ VL ++R VAW +G S+G Y+ +Y ER QFG +++ Q+ Q+
Sbjct: 234 NRLQKSQSFRETAAVLRLTRAEVAWAAVGNSIGAYEAAVKYADERIQFGKSISSHQLVQE 293
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L + LGNI A I + R+ ++ ++G HA+L K + T+R RETVA RELLGGNGI
Sbjct: 294 HLAKSLGNITASIGMVTRVSEMLDEGIQKDEHAALAKEYTTSRMRETVAWCRELLGGNGI 353
Query: 389 LSDFLVAK 396
+ D+ V +
Sbjct: 354 VLDYGVMR 361
>gi|116669002|ref|YP_829935.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
FB24]
gi|116609111|gb|ABK01835.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
Length = 404
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 219/389 (56%), Gaps = 10/389 (2%)
Query: 34 QATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
+ T + PP +D DLL + E++ ++VRE ++ I EYW + EFPF ++
Sbjct: 12 ETTTVPEQPPFPEADLMYIVDLLPAGERSRYLEVREFLQSRIRAASIEYWNREEFPFGLL 71
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
++G + G G S + E+AR D S S + +H+ L + I GS
Sbjct: 72 AEMGKF-----GLGGLQTDGTSALFKGLMYVEVARADVSLSALVGIHNELIVGMIDELGS 126
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTF 211
E QKQ++LP L + +ALTEP +GSD A L T+A G W++ G KRWIG T
Sbjct: 127 EAQKQRWLPGLKAFTQLGAFALTEPDHGSDIAGGLETSARLERGEWVINGAKRWIGAGTI 186
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
AD +++AR+ QI G++V+ D PG + TKI NKIGLRI+QN DI+L +V +P+ + L
Sbjct: 187 ADFALVWARDEADRQIKGFIVETDRPGYSATKISNKIGLRIMQNADIVLDEVRIPESNLL 246
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
PG F + +L SR V WQ GI + +D+ Y ERKQFG LA FQ+ QQ+L
Sbjct: 247 PGATDFSKANDLLRDSRAWVGWQCAGIQLAAFDVARAYALERKQFGKELARFQLIQQQLA 306
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
++LGN A + + +L ++ + G + A++ KS T AR +VA+GR L+GGNGI SD
Sbjct: 307 EILGNASASLALMAQLARIQQDGKLEMVQAAMAKSTTTRLARASVAMGRSLMGGNGISSD 366
Query: 392 FLVAKVI---MLFFLHLDHFVCKNLIVSN 417
+ + K+ + + + + +LIV+
Sbjct: 367 YEMGKLFGDAEILYTYEGSYEINSLIVAR 395
>gi|148272206|ref|YP_001221767.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147830136|emb|CAN01065.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 392
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 205/355 (57%), Gaps = 1/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P D+Y ++ L E+ +R +E E+ P + W +AEFP HV+ L + G
Sbjct: 5 PLIGDFYGYETRLGDREKESLAGLRAYLEAEVKPHVNGLWARAEFPRHVVAGLAERGLFG 64
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+S A E+ RVDAS +T + + S L M ++A+ GS EQ+ ++LP
Sbjct: 65 MPFPETRPFENSAVYRGWAALELGRVDASIATLVGMQSGLVMGSVAVAGSPEQRAEWLPR 124
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
A + + LTEP GSD A L T AT+ W + G KRWIGN T +DV VI+A++
Sbjct: 125 FASGEILGSFGLTEPLSGSDSARGLRTVATRRGDEWSITGSKRWIGNGTISDVTVIWAKD 184
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
Q+ G+LV D+PG T+IE+K LRIVQN DI L V VP+ +RL SF DT+
Sbjct: 185 ADDGQVKGFLVPNDSPGFRATRIEDKQALRIVQNADIELDGVIVPERNRLQNGTSFADTA 244
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
VL ++R VAW IGIS+G Y+ Y ER+QFG PL A Q+ Q LV+ LGNI A I
Sbjct: 245 AVLRLTRAEVAWAAIGISIGAYEAAVAYTGEREQFGKPLGAHQLIQDLLVRSLGNITASI 304
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G + H++L K++ T+R RETVA RE GGNGI+ D+ VA+
Sbjct: 305 GLVTRASEMVDEGTQSDEHSALAKAYATSRMRETVAWCREAFGGNGIVLDYDVAR 359
>gi|400975179|ref|ZP_10802410.1| putative glutaryl-CoA dehydrogenase [Salinibacterium sp. PAMC
21357]
Length = 394
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 220/362 (60%), Gaps = 9/362 (2%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEF-PFHVIPK----L 95
F +SD+Y +++ LT +E+ +K+R +++E+ PI + W KAEF V+ K L
Sbjct: 3 FETLSSDFYGYENALTDQEKDTILKLRAFLDREVRPIANDLWAKAEFFDRDVVVKGLADL 62
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G + + + P +V +A+ E+ARVDAS +T + + + L M +I + GS+EQ
Sbjct: 63 GLFGLPWAETQQF--PNSAVFRGWVAL-ELARVDASAATLVGMQNGLVMGSIGVAGSQEQ 119
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
+ ++LP A + + LTEP GSD A L T A + WI+ G KRWIGN + +DV
Sbjct: 120 RDEWLPKFASGELLGAFGLTEPLSGSDTAQGLRTVAQRDGDNWIINGAKRWIGNGSISDV 179
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+I+AR+ NQ+ G++V PG + T+IENK LRIVQN DI+L+ V VP+ +RL
Sbjct: 180 TIIWARDEADNQVKGFIVPTSTPGYSATRIENKQALRIVQNADIVLENVVVPESNRLQKS 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
SF+DT+ VL ++R VAW +G S+G Y+ +Y ER QFG +++ Q+ Q+ L + L
Sbjct: 240 TSFRDTAAVLRLTRAEVAWAAVGNSIGAYEAAVKYTGERVQFGKTISSHQLVQEHLAKSL 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GNI A I + R+ ++ ++G HA+L K + +R RETVA RE+LGGNGI+ D+ V
Sbjct: 300 GNITASIGMVTRVSEMLDEGIQKDEHAALAKEYTASRMRETVAWCREVLGGNGIVLDYGV 359
Query: 395 AK 396
+
Sbjct: 360 MR 361
>gi|184200152|ref|YP_001854359.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
gi|183580382|dbj|BAG28853.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
Length = 400
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 212/348 (60%), Gaps = 5/348 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D++ D L++EE A+R +VR ++ + P + +WE+ E P V L L + G I+
Sbjct: 9 DFFLLDQQLSAEETALRDRVRTYGQEHVLPAINAFWERGEHPLPVFKGLADLGIVGTFIE 68
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S A + E+ R+D S +TF VHS+L M +I + G+EEQ+Q++LP++A++
Sbjct: 69 GYGCPGLSRQAAGLVAREMGRIDGSVNTFFGVHSNLCMGSIYMLGNEEQRQRWLPTMAKI 128
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ALTEP +GSD+ +L T+A + W+L G KRWIGN ADV+V++AR+ Q
Sbjct: 129 EKTGAFALTEPTHGSDSVSLETSARRDGDHWVLNGHKRWIGNGHAADVIVLYARDEADGQ 188
Query: 227 INGYLVKKDAP-----GLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ ++V+K G T I+ KIG R + DI+++ + +P+E+RL +SF+D +
Sbjct: 189 VKCFVVEKQEDGEYPQGYRPTVIDGKIGKRAINQADIVIEDLRIPEENRLENCHSFKDVN 248
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVL +R +W+ +G M +++ Y ER+QFG P+A +Q+ Q++L ML ++ +M
Sbjct: 249 KVLKATRGGASWEAVGHGMAAFEIAANYALEREQFGMPIANYQLVQERLATMLSDLTSMQ 308
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L+ R+ +L E +T ASL K + +A + R++LGGNG+L
Sbjct: 309 LLCTRMAQLQESDQLTDAMASLVKMTTSRKALDMCRTARDMLGGNGLL 356
>gi|170781079|ref|YP_001709411.1| acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155647|emb|CAQ00765.1| putative acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 392
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 204/355 (57%), Gaps = 1/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P D+Y ++ L E+ +R +E E+ P + W +AEFP HV+ L + G
Sbjct: 5 PLIGDFYGYESRLGEREKESLADLRAYLEAEVKPHVNGLWARAEFPRHVVGGLAERGLFG 64
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+S A E+ RVDAS +T + + S L M ++A+ GS EQ+ ++LP
Sbjct: 65 MPFPETRPFENSAVYRGWAALELGRVDASIATLVGMQSGLVMGSVAVAGSPEQRAEWLPR 124
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
A + + LTEP GSD A L T AT+ W + G KRWIGN T +DV VI+A++
Sbjct: 125 FASGEILGSFGLTEPLSGSDSARGLRTIATRRGDEWSITGSKRWIGNGTVSDVTVIWAKD 184
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
Q+ G+LV D+PG T+IE+K LRIVQN DI L V VPD +RL SF DT+
Sbjct: 185 ADDGQVKGFLVPNDSPGFRATRIEDKQALRIVQNADIELDGVIVPDANRLQNGTSFADTA 244
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
VL ++R VAW IGIS+G Y+ Y ER QFG PL A Q+ Q LV+ LGNI A I
Sbjct: 245 AVLRLTRAEVAWAAIGISIGAYEAAVAYTGERVQFGKPLGAHQLIQDLLVRSLGNITASI 304
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G + H++L K++ T+R RETVA RE GGNGI+ D+ VA+
Sbjct: 305 GLVTRASEMVDEGTQSDEHSALAKAYATSRMRETVAWCREAFGGNGIVLDYDVAR 359
>gi|83816200|ref|YP_444269.1| glutaryl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
gi|83757594|gb|ABC45707.1| glutaryl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
Length = 480
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 4/363 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S PP +D Y+ + LT ++A R VR M+ E+ P+ + WE FP +IPK GAL
Sbjct: 88 SPTPPVNADVYEVFEGLTDAQEATRETVRSFMQAEVEPVANDMWEDGTFPKDLIPKAGAL 147
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
Y P + E++RV+ S TF VH+ L+M ++AL GSE QK++
Sbjct: 148 FDEVVGRDAYTFPSDDPIRTNLISFEMSRVEPSFCTFWGVHTLLSMGSVALFGSEAQKER 207
Query: 159 YLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+L +A + I WALTEP +GSD S L TTA + W+L+G K+W GN+TFADV V+
Sbjct: 208 FLEPMAAFDMIGSWALTEPDHGSDVSQGLATTARREGDTWVLDGAKKWAGNATFADVTVV 267
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ I G+LV+++ PG V +I KI R V+NG I L V +P+ +RLPGV+ F
Sbjct: 268 WARDEADGCIKGFLVEQERPGYHVEQIGGKIAKRGVENGLIELDGVELPEANRLPGVSHF 327
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
D S LA R VAW+ G++ G Y+ Y ER QFG P ++FQ+ Q KLV MLG +
Sbjct: 328 GDVSAQLATCRASVAWEAAGLATGAYEKALAYCNERTQFGKPTSSFQMVQDKLVTMLGKV 387
Query: 338 QAMILVGWRLCKLYEKGAMTPGH--ASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
A+ +L +L E GA G+ +SL K W RE V++ R ++GGNGIL D VA
Sbjct: 388 TALQTFVMQLGRL-EAGAGAIGNERSSLAKVWACDTMREVVSIARGIMGGNGILLDHDVA 446
Query: 396 KVI 398
++
Sbjct: 447 RLF 449
>gi|433457901|ref|ZP_20415866.1| glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes BAB-32]
gi|432194135|gb|ELK50790.1| glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes BAB-32]
Length = 402
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 216/378 (57%), Gaps = 21/378 (5%)
Query: 29 SVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP 88
+VA +A A +F P SD Y F LL+ E AV ++R ++ ++ P++A+YWE+ EFP
Sbjct: 3 AVAEEKAGVAEQFYP--SDQYGFATLLSEAELAVLGRLRAVLDGQVKPLLADYWEQGEFP 60
Query: 89 FHVIPKLGALRV-------AGGTIKG--YGCPGHSVTGAAIAIAEIARVDASCSTFILVH 139
+ + L L + AGG + YG E+AR DAS +TF
Sbjct: 61 YQIAQPLYDLHLMDPEELTAGGVVPSGLYG---------GFRNFELARTDASVATFYNAQ 111
Query: 140 SSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWI 198
S L T+ L GS EQ + P + +ALTEP +GSD A L TTA + G WI
Sbjct: 112 SGLFRTTVNLGGSPEQAARLDPLIRSFEYKGVFALTEPDHGSDIAGGLATTARREGGSWI 171
Query: 199 LEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDI 258
+ G KRWIG + ADVL +FAR+ Q+ +LV +PGLT+TKI K LR++QN DI
Sbjct: 172 INGAKRWIGGAASADVLAVFARDEADRQVKCFLVPTGSPGLTITKIGRKTALRMMQNADI 231
Query: 259 LLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGA 318
L +V VP+ RL VNSF+D + +L R VAW G+ G Y+ RY+KER+QFG
Sbjct: 232 ELAEVEVPESARLQNVNSFKDVAGLLRNMRSDVAWIATGLQAGAYEAAVRYVKEREQFGR 291
Query: 319 PLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVAL 378
P+A+FQ+ Q+KL MLGN+ A + + RL + E G +++L K + R RETVAL
Sbjct: 292 PIASFQLIQEKLATMLGNVTASLGMVVRLTQQQEAGIYKDENSALAKMFTCVRMRETVAL 351
Query: 379 GRELLGGNGILSDFLVAK 396
RE++GGNGI D VA+
Sbjct: 352 AREVVGGNGITLDTDVAR 369
>gi|294505947|ref|YP_003570005.1| glutaryl-CoA dehydrogenase [Salinibacter ruber M8]
gi|294342275|emb|CBH23053.1| Glutaryl-CoA dehydrogenase [Salinibacter ruber M8]
Length = 447
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 4/363 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
S PP +D Y+ + LT ++A R VR M+ E+ P+ + WE FP +IPK GAL
Sbjct: 55 SPTPPVNADVYEVFEGLTDAQEATRETVRSFMQAEVEPVANDMWEDGTFPKDLIPKAGAL 114
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
Y P + E++RV+ S TF VH+ L+M ++AL GSE QK++
Sbjct: 115 FDEVVGRDAYTFPSDDPIRTNLISFEMSRVEPSFCTFWGVHTLLSMGSVALFGSEAQKER 174
Query: 159 YLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+L +A + I WALTEP +GSD S L TTA + W+L+G K+W GN+TFADV V+
Sbjct: 175 FLEPMAAFDMIGSWALTEPDHGSDVSQGLATTARREGDTWVLDGAKKWAGNATFADVTVV 234
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+AR+ I G+LV+++ PG V +I KI R V+NG I L V +P+ +RLPGV+ F
Sbjct: 235 WARDEADGCIKGFLVEQERPGYHVEQIGGKIAKRGVENGLIELDGVELPEANRLPGVSHF 294
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
D S LA R VAW+ G++ G Y+ Y ER QFG P ++FQ+ Q KLV MLG +
Sbjct: 295 GDVSAQLATCRASVAWEAAGLATGAYEKALAYCNERTQFGKPTSSFQMVQDKLVTMLGKV 354
Query: 338 QAMILVGWRLCKLYEKGAMTPGH--ASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
A+ +L +L E GA G+ +SL K W RE V++ R ++GGNGIL D VA
Sbjct: 355 TALQTFVMQLGRL-EAGAGAIGNERSSLAKVWACDTMREVVSIARGIMGGNGILLDHDVA 413
Query: 396 KVI 398
++
Sbjct: 414 RLF 416
>gi|145480697|ref|XP_001426371.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393445|emb|CAK58973.1| unnamed protein product [Paramecium tetraurelia]
Length = 396
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 214/353 (60%), Gaps = 10/353 (2%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
KF +Y + D+L ++E+ + VR+ +++ AP + +Y E AEFP ++ L L+
Sbjct: 15 KFLADPLEYLRLYDMLENDEKDICFAVRKFAQEKAAPTINKYVEAAEFPTEIVEALKPLK 74
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ T ++ +A E+A+VDA STF L+ SSL +I GSE+QKQKY
Sbjct: 75 LIHKT--------NTYVKTGLAYLELAKVDAGLSTFYLLISSLVPHSIETFGSEDQKQKY 126
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
L + ++ + WALTE YGSDAS+L TT KV+GG++L G KRWIGN D+LV++A
Sbjct: 127 LTRIKDMDILGGWALTEREYGSDASSLQTTVKKVQGGYLLNGNKRWIGNGN-KDILVVWA 185
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
RN N I G++V+ G+ I++K+ LRIVQN I K VF+PDE+R+P FQ+
Sbjct: 186 RNAENNNIEGFIVENKWAGVHAEPIKHKLALRIVQNCQITFKDVFIPDENRMPKAKDFQN 245
Query: 280 -TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
++ L SRV V W +GI GVY+ +++ RKQFG +A FQ+ Q++L ++L Q
Sbjct: 246 GVTQALQHSRVGVPWIALGIQAGVYENVVKFITRRKQFGKHIAGFQLQQERLTRILTTFQ 305
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
A L+ ++ +L ++ T G + K+W+T + RE LGRE++GG+GIL +
Sbjct: 306 ASFLMVIQVSRLAQEKKATLGQIAAVKAWVTDKTREVARLGREMMGGDGILVE 358
>gi|145547781|ref|XP_001459572.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427397|emb|CAK92175.1| unnamed protein product [Paramecium tetraurelia]
Length = 396
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 211/351 (60%), Gaps = 10/351 (2%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
KF +Y + D+L +E+ + VR+ +++ AP + +Y E AEFP ++ L L+
Sbjct: 15 KFLADPLEYLRLYDMLEQDEKDICFAVRKFAQEKAAPTINKYVEAAEFPTEIVEALKPLK 74
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ T ++ +A E+A+VDA STF L+ SSL +I GSEEQKQKY
Sbjct: 75 LIHKT--------NTYVKTGLAYLELAKVDAGLSTFYLLISSLVPHSIETFGSEEQKQKY 126
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
L + ++ + WALTE YGSDAS++ TT KV+GG++L G KRWIGN D+LV++A
Sbjct: 127 LTRIKDMDILGGWALTEKEYGSDASSIQTTVKKVQGGYLLNGNKRWIGNGN-KDILVVWA 185
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
RN N I G++V+ G+ I++K+ LRIVQN I K VFVPDE+R+P FQ+
Sbjct: 186 RNAENNNIEGFIVENKWAGVHAEPIKHKLALRIVQNCQITFKDVFVPDENRMPKAKDFQN 245
Query: 280 -TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
++ L SRV V W +GI GVY+ ++ RKQFG +A FQ+ Q++L ++L Q
Sbjct: 246 GVTQALQHSRVGVPWIALGIQAGVYENVVKFTTRRKQFGKHVAGFQLQQERLARILTTFQ 305
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
A L+ ++ +L ++ T G + K+W+T + RE LGRE++GG+GIL
Sbjct: 306 ASFLMVIQVSRLAQEKKATLGQIAAVKAWVTDKTREVARLGREMMGGDGIL 356
>gi|374850336|dbj|BAL53327.1| glutaryl-CoA dehydrogenase [uncultured Bacteroidetes bacterium]
Length = 389
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 209/354 (59%), Gaps = 3/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DYYQ D+LL+ EE+ VR VRE +E E+ PI+ E +++A FP ++PK+ L + G T+
Sbjct: 7 DYYQLDELLSPEERMVRDTVREFVENEVIPIIEEAYQQAYFPMELVPKMAELGLFGMTLP 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + +A+ E+ R D+ +F V SSL M I GSEEQ+Q++LP LA+
Sbjct: 67 QEYGCGGMNNMSYGLAMQELERGDSGVRSFASVQSSLVMYPIYAYGSEEQRQRWLPRLAR 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP YGS+ + + TTATK++GG++L G K WI N + ADV V++A+
Sbjct: 127 AEAIGCFGLTEPDYGSNPAGMITTATKIDGGYLLNGAKMWITNGSIADVAVVWAK--LDG 184
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G+LV+K G + +++NK LR +++ + V +P+E+ LP + L
Sbjct: 185 EIRGFLVEKGMKGFSAPEMKNKHSLRASVTSELIFQDVEIPEENLLPNARGLKAPLSCLT 244
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW IG +M YD +Y R QFG P+ AFQ+ Q+KL ML I L+ W
Sbjct: 245 QARYGIAWGAIGAAMACYDASVKYATTRIQFGKPIGAFQLVQEKLATMLTEITKGQLLCW 304
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL KL + G + P SL K A A E L R++ G NGI S++ V + ++
Sbjct: 305 RLAKLKDAGTLRPQQVSLAKRNNVAIALEIARLARDIHGANGITSEYPVMRHML 358
>gi|403525567|ref|YP_006660454.1| acyl-coenzyme A oxidase [Arthrobacter sp. Rue61a]
gi|403227994|gb|AFR27416.1| acyl-coenzyme A oxidase [Arthrobacter sp. Rue61a]
Length = 405
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 206/360 (57%), Gaps = 7/360 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
PP +D DLL +EE+ +++RE ++ I +YW + EFPF ++ +
Sbjct: 20 LPPYPEADLMHVIDLLPTEERVRYLEIREFLQTRIRAASIDYWNREEFPFGLLADMAKF- 78
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G G S + EIAR D S S + +H+ L + I GS+EQK+K+
Sbjct: 79 ----GLGGLQTDGSSKLFKGLMYTEIARADVSLSALVGIHNELIVGMIHELGSDEQKRKW 134
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP L + +ALTEP +GSD A L+TTA + G W++ G KRWIG T AD +++
Sbjct: 135 LPGLEAFTQLGAFALTEPDHGSDIAGGLSTTARRDGGEWVINGAKRWIGAGTIADFALVW 194
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ I G++V+ D PG + TKI NKIGLRI+QN DI+L +V VP E+ LPG F
Sbjct: 195 ARDLADGHIKGFIVETDRPGYSATKISNKIGLRIMQNADIVLDEVRVPLENLLPGATEFS 254
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
+ +L SR V WQ GI + +D+ Y ERKQFG LA FQ+ QQ+L +LGN
Sbjct: 255 RANDLLRDSRAWVGWQAAGIQLAAFDIARSYALERKQFGKELARFQLVQQQLADILGNAN 314
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
A + + L ++ + G + A++ K+ T AR +V++GR LLGGNGI +D+ +AK+
Sbjct: 315 ASLSMMVELARIQQAGNLEMVQAAMCKATTTRLARSSVSMGRSLLGGNGITTDYEMAKLF 374
>gi|108805190|ref|YP_645127.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108766433|gb|ABG05315.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 402
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 216/354 (61%), Gaps = 2/354 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P A+D+ + D LL+ EE AVR +VR +E+E+ P+ AE+W++A+FPF ++ LG L +
Sbjct: 8 PHSAADFARTDRLLSREELAVRDRVRAFVEEEVIPVAAEHWDRAQFPFGLLKGLGELGLL 67
Query: 102 GGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
GGT K YG G + + +AE+AR S STF+ V S LAM I GSEEQK+++L
Sbjct: 68 GGTYEKRYGGSGMNNVAYGLGVAELARGSGSLSTFLHVQSGLAMAAIHELGSEEQKERWL 127
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A+ C+ALTEP GSD +++ TTA++ GG++LEG+KRWIGN++FADV V++A+
Sbjct: 128 PPMARCEKTGCFALTEPEAGSDPASMRTTASRAPGGYVLEGEKRWIGNASFADVAVVWAK 187
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
++ G+LV+K A G I K R V I L++ FVP+E+RLP T
Sbjct: 188 G-EDGRVRGFLVEKGAEGFEARVIPRKGSQRAVWQAHIRLRRCFVPEENRLPLAEGLGST 246
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+L SR V W +G + Y+ + R+QFG P+AAFQ+ Q +LV+M ++ +
Sbjct: 247 LSILTHSRYGVGWDGLGQAADCYERALEHSLRRRQFGHPIAAFQLVQHRLVRMATSLAEL 306
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
L+ + +L + G + P S+ K ++ARE AL RE LGGNGIL D V
Sbjct: 307 RLLAVHMGRLKDAGELDPPLVSMFKMSSLSKAREIAALARETLGGNGILLDHRV 360
>gi|119961497|ref|YP_946318.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
gi|119948356|gb|ABM07267.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
Length = 405
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 206/360 (57%), Gaps = 7/360 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
PP +D DLL +EE+A +++RE ++ I +YW + EFPF ++ +
Sbjct: 20 LPPYPEADLMHVIDLLPTEERARYLEIREFLQTRIRAASIDYWNREEFPFGLLADMAKF- 78
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G G S + EIAR D S S + +H+ L + I GS+EQK+K+
Sbjct: 79 ----GLGGLQTDGSSKLFKGLMYTEIARADVSLSALVGIHNELIVGMIHELGSDEQKRKW 134
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
LP L + +ALTEP +GSD A L+TTA + G W++ G KRWIG T AD +++
Sbjct: 135 LPGLEAFTQLGAFALTEPDHGSDIAGGLSTTARRDGGEWVINGAKRWIGAGTIADFALVW 194
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ I G++V+ D PG + TKI NKIGLRI+QN I+L +V VP E+ LPG F
Sbjct: 195 ARDLADGHIKGFIVETDRPGYSATKISNKIGLRIMQNAAIVLDEVRVPLENLLPGATEFS 254
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
+ +L SR V WQ GI + +D+ Y ERKQFG LA FQ+ QQ+L +LGN
Sbjct: 255 RANDLLRDSRAWVGWQAAGIQLAAFDIARSYALERKQFGKELARFQLVQQQLADILGNAN 314
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
A + + L ++ + G + A++ K+ T AR +V++GR LLGGNGI +D+ +AK+
Sbjct: 315 ASLSMMVELARIQQAGKLEMVQAAMCKATTTRLARSSVSMGRSLLGGNGITTDYEMAKLF 374
>gi|395237202|ref|ZP_10415296.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|423350929|ref|ZP_17328581.1| hypothetical protein HMPREF9719_00876 [Turicella otitidis ATCC
51513]
gi|394487567|emb|CCI83384.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|404387075|gb|EJZ82203.1| hypothetical protein HMPREF9719_00876 [Turicella otitidis ATCC
51513]
Length = 409
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 210/357 (58%), Gaps = 5/357 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ D L + +R ++RE +K + P++ +YWE+AEFP+ ++ L L V G I
Sbjct: 15 DFLYLDRELDDDLIKLRDRIREFGKKHVDPVIDDYWERAEFPYELLEPLADLGVVGTFIP 74
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S GA I E+ RVD S +TF+ VHS+L M +I + G EEQ+ ++LP LA L
Sbjct: 75 GYGCPGLSRLGAGIVARELGRVDGSLNTFMGVHSNLGMGSIYMLGDEEQRNRWLPDLAAL 134
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
A + LTEP +GSD+ +L T+A + W++ G KRWIGN AD +V++AR+
Sbjct: 135 KKTAAFGLTEPKHGSDSVSLETSARREGDSWVINGHKRWIGNGHAADNIVLYARDEEDGN 194
Query: 227 INGYLVKKDA-----PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ ++V+K A G I+ KIG R + DI+++ + VP+E+RL SF +
Sbjct: 195 VKAFVVEKQADGSYPEGYRPEVIKGKIGKRAILQADIVIENLHVPEENRLKNCESFAGVN 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VLA +R +W+ +G +M ++ +Y ER+QF AP+A++Q+ Q+KL MLG++
Sbjct: 255 RVLAATRGGASWESVGHAMAGFEFAAKYALEREQFSAPIASYQLVQEKLATMLGHVTEAQ 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
L+ R+ +L E+ M ASL K + R++LGGNG+L + VA+ +
Sbjct: 315 LLCTRMAELQERDEMDGPRASLIKMVTARKGLAVTREARDMLGGNGLLLENKVARHV 371
>gi|184201741|ref|YP_001855948.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
gi|183581971|dbj|BAG30442.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
Length = 419
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 218/368 (59%), Gaps = 3/368 (0%)
Query: 32 FPQATPASKF---PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP 88
FP T + P A+D + ++ E++A +++ R +++E+ P++AEYW++ E+
Sbjct: 19 FPTGTLEPHYDLNEPLATDEAGIYEGVSEEDRAHQLRARTFVQEEVLPVIAEYWDRGEYN 78
Query: 89 FHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIA 148
++ ++G + + ++ G P S A + E++R D S ST V LAM +IA
Sbjct: 79 LDLVRRMGEMDLLRDGVEVPGMPPMSKMAAGLVAMELSRGDGSISTVSGVQGGLAMRSIA 138
Query: 149 LCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208
LCGSEEQKQ++LP +A + +ALTEPA+GSD+ L + AT VEGG+IL G K+WIGN
Sbjct: 139 LCGSEEQKQRWLPDMATGKLLGAFALTEPAHGSDSIGLESRATPVEGGYILNGAKKWIGN 198
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
+ + V++AR+ ++G++V +++ G T T ++ K+ LR + +I L+ VFVP E
Sbjct: 199 GSMGGITVVWARSDEDGAVHGFVVPQESEGYTGTTMKAKLALRAIHQAEITLENVFVPTE 258
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ LP +F+DTS VL +R+ VAW +G + Y+ Y +R QFG PLAA QI Q+
Sbjct: 259 NVLPHAKNFRDTSAVLFATRIGVAWAAVGHAQACYETAVHYAMQRHQFGRPLAASQIVQE 318
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+L +ML + + + + + E G ++ ASL K T AR+ R+LLGGNGI
Sbjct: 319 RLTRMLSELTQIQTLVMAMARKEEAGTLSGPQASLAKYTATRTARQVAMNARDLLGGNGI 378
Query: 389 LSDFLVAK 396
L + VA+
Sbjct: 379 LMENRVAR 386
>gi|220911416|ref|YP_002486725.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|219858294|gb|ACL38636.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
chlorophenolicus A6]
Length = 396
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 206/370 (55%), Gaps = 12/370 (3%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P + P +D LL EQA +R ++ + P YW + EFP V+
Sbjct: 4 PSHGGPAGIPYPDADLLHIVRLLPPLEQARYADIRNYLQSTVRPASIGYWNREEFPRDVV 63
Query: 93 PKLGALRVAGGTIKGYG---CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
+GA +G G G S + E+AR D S S +H+ L + TI
Sbjct: 64 AGMGA--------RGLGELQLDGSSALFKGLMYVELARADVSLSALAGIHNELIVGTIHE 115
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGN 208
GS+EQK+++LP L + +ALTEPA+GSD S L TTA + G W+L G KRWIGN
Sbjct: 116 LGSDEQKRRWLPGLRTFAQLGAFALTEPAHGSDISRGLETTARRDGGEWVLNGTKRWIGN 175
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
T ADV +++AR+T + +LV+ D PG + +IE+KIGLRI+QN DI L+ V +P+
Sbjct: 176 GTIADVALVWARDTADGHLKCFLVETDRPGYSAARIEHKIGLRIMQNADIRLEDVRLPEA 235
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ LPG +SF + +L SR V WQ GI +D+ Y +R+QFG LA FQ+ QQ
Sbjct: 236 NLLPGASSFASANALLRDSRAWVGWQAAGIQFAAFDVARSYTLDRRQFGRELAGFQLVQQ 295
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+L +LGN A + + +L +L E G + A++ K+ T AR +VA+GR LLGGNGI
Sbjct: 296 QLADILGNAAASLALMVQLARLQEDGLLEMVQAAMAKATTTRLARASVAMGRSLLGGNGI 355
Query: 389 LSDFLVAKVI 398
SD +AK+
Sbjct: 356 TSDHTMAKLF 365
>gi|378549488|ref|ZP_09824704.1| hypothetical protein CCH26_05355 [Citricoccus sp. CH26A]
Length = 414
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 204/342 (59%), Gaps = 1/342 (0%)
Query: 48 YYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG 107
Y F DL EE A+ + R+ + ++ M W+ A++P ++ ++G + + +
Sbjct: 34 YAVFADL-PDEELALWRRARQFVTPQVLQQMHRAWDLAQYPLDLVEQMGRMDLLRDGVAV 92
Query: 108 YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLN 167
G P S A +A E++R D S +T + V LAM +I LCGSEEQKQ+YL LA+
Sbjct: 93 EGLPEVSRVAAGLATMELSRGDGSLATVVAVQGGLAMRSIELCGSEEQKQRYLTPLARGE 152
Query: 168 TIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQI 227
+ +ALTEP +GSDA L TTAT GGW+L G K+WIGN + V++AR+T ++
Sbjct: 153 LLGSFALTEPTHGSDAVGLETTATPTAGGWLLNGHKKWIGNGASGGITVVWARSTEDEKV 212
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++V +++ G IE KI LR + DI L VFVP++ +P SF+DTS+VL +
Sbjct: 213 RGFIVPQESEGYRAGVIEGKIALRAIHQADITLDGVFVPEDHVMPDATSFRDTSRVLFST 272
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
RV VAW +G ++G ++ +Y+++R+QFG PLAA QI Q++L +ML + + L+ R
Sbjct: 273 RVGVAWSAVGQALGCFEGALQYVQQRRQFGRPLAASQIVQERLARMLSQLTQVQLLVLRA 332
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
+L ++G +T ASL K T AR R+LLGGNGIL
Sbjct: 333 AQLEDRGTLTGPQASLAKYSATRAARSIAQDARDLLGGNGIL 374
>gi|378549530|ref|ZP_09824746.1| hypothetical protein CCH26_05565 [Citricoccus sp. CH26A]
Length = 423
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 213/359 (59%), Gaps = 8/359 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DY + L + + R VR +++++ P++ YWE+AEFP+ ++ L A V GG I
Sbjct: 33 TDYLLLEQDLPEDARRARAAVRAFVDRDVLPVINGYWERAEFPYELLEPLAATGVVGGAI 92
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
G+G PG S A +A E++R D S +TF+ V ++L+M TI + GSEEQK+++LP +A
Sbjct: 93 TGHGAPGLSRLAAGLATVELSRGDGSMNTFLGVQANLSMGTINMLGSEEQKRRWLPDMAA 152
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
L I +ALTEP +GSD+ L+TTA + W++ G KRWIGN + A +++IFAR+
Sbjct: 153 LRRIGAFALTEPRHGSDSVNLDTTARREGDTWVINGAKRWIGNGSMAHLVIIFARDEADG 212
Query: 226 QINGYLVKKDAP--------GLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
Q+ +++++ P G IE K+G R + ++ + + +P+E+RLPG F
Sbjct: 213 QVKAFVMERGDPRDPEDRPEGFDYQVIEGKVGKRAILQANLSFRDLRIPEENRLPGARGF 272
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+D S+VLA +R +W+ +G ++ ++ Y + R+QFG P+ + Q+ Q L QML +
Sbjct: 273 RDVSRVLATTRGGASWEALGHALACFEAAVTYAEVREQFGRPVGSNQLVQNTLAQMLTEL 332
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
A+ L+ +R+ L E G T AS+ K +AR R+LL GNG+L DF VA+
Sbjct: 333 TAIQLLCFRMAHLQETGQWTGSMASIAKMHTANKARWIAQQARDLLAGNGLLLDFHVAR 391
>gi|239916859|ref|YP_002956417.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239838066|gb|ACS29863.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 404
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 206/355 (58%), Gaps = 1/355 (0%)
Query: 43 PCASDYY-QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P +D+Y D+ +E+ R +E ++ P + E W++ E+P ++ +LG +
Sbjct: 17 PLDTDFYLALADVSDAEKDVWRRARAFALEPDVLPRIREAWDRHEYPLDLVARLGQADLL 76
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+ G P S A +A+ E++R+D S +T V LAM +I LCGSEEQ+ ++LP
Sbjct: 77 RDGVPVDGLPDVSRVAAGLAMMELSRLDGSIATMTGVQGGLAMRSIQLCGSEEQRAEHLP 136
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
++A+ +ALTEP +GSD+ +L T A +V+GGW L G K+WIGN V V++AR+
Sbjct: 137 AMARGELYGAFALTEPTHGSDSVSLETRAERVDGGWRLHGHKKWIGNGAAGGVTVVWARS 196
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G++V++++ G T I+ K+ LR + I L VFVPD D LP SF+DTS
Sbjct: 197 AEDEKVRGFIVRQESEGYTAEVIKGKVALRAIDQAHITLDGVFVPDADVLPEARSFKDTS 256
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VL +RV VAW +G ++G Y+ Y +R QFG PLAA Q Q +L +ML + +
Sbjct: 257 RVLFATRVGVAWSALGKAVGCYEAAVHYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQ 316
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ R +L ++G +T ASL K T AR A R+LLGGNGIL VA+
Sbjct: 317 LLVLRATRLEDEGRLTGPMASLAKYSATRAARSIAANARDLLGGNGILIQNEVAR 371
>gi|242087025|ref|XP_002439345.1| hypothetical protein SORBIDRAFT_09g004830 [Sorghum bicolor]
gi|241944630|gb|EES17775.1| hypothetical protein SORBIDRAFT_09g004830 [Sorghum bicolor]
Length = 187
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/145 (78%), Positives = 135/145 (93%)
Query: 252 IVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 311
+VQNGDI+L +VFVP+EDRLPG+NSFQD +KV A+SRV+V WQPIGISMGV+DMCHRYLK
Sbjct: 1 MVQNGDIVLNEVFVPEEDRLPGINSFQDVNKVFAMSRVLVTWQPIGISMGVFDMCHRYLK 60
Query: 312 ERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITAR 371
ERKQFGAPLAAFQ+NQ+KLV+MLGN+QAM+LVGWRLCKLYE G +TPG +SLGK+W + +
Sbjct: 61 ERKQFGAPLAAFQLNQEKLVRMLGNVQAMLLVGWRLCKLYEAGKLTPGQSSLGKAWTSRK 120
Query: 372 ARETVALGRELLGGNGILSDFLVAK 396
ARE V+LGRELLGGNGIL+DFLVAK
Sbjct: 121 AREVVSLGRELLGGNGILADFLVAK 145
>gi|448336372|ref|ZP_21525472.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pallidum DSM 3751]
gi|445629264|gb|ELY82556.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pallidum DSM 3751]
Length = 387
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 199/348 (57%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E+ FP +IPK+G L ++
Sbjct: 3 DFVQLEADLGQEERMIRDTAREFVEEHVKPDIGEHYEQGTFPKDLIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK ++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKAEWLPEMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +T
Sbjct: 123 ESIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDKSTED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGEMRPQHVSMSKRNNVRMARDQARIAREMLGGNGITTDY 350
>gi|289706055|ref|ZP_06502428.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
gi|289557257|gb|EFD50575.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
Length = 404
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 206/355 (58%), Gaps = 1/355 (0%)
Query: 43 PCASDYY-QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P +D+Y D+ +E+ R +E ++ P + E W++ E+P ++ +LG +
Sbjct: 17 PLDTDFYLALADVSDAEKDVWRRARAFALEPDVLPRIREAWDRHEYPLDLVARLGQADLL 76
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+ G P S A +A+ E++R+D S +T V LAM +I LCGSEEQ+ ++LP
Sbjct: 77 RDGVPVDGLPDVSRVAAGLAMMELSRLDGSIATMTGVQGGLAMRSIQLCGSEEQRAEHLP 136
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
++A+ +ALTEP +GSD+ +L T A +V+ GW L G K+WIGN V V++AR+
Sbjct: 137 AMARGELYGAFALTEPTHGSDSVSLETRAERVDSGWRLHGHKKWIGNGAAGGVTVVWARS 196
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G++V++++ G T I+ K+ LR + I L VFVPD D LP SF+DTS
Sbjct: 197 AEDEKVRGFIVRQESEGYTAEVIKGKVALRAIDQAHITLDGVFVPDADVLPEARSFKDTS 256
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+VL +RV VAW +G ++G Y+ +Y +R QFG PLAA Q Q +L +ML + +
Sbjct: 257 RVLFATRVGVAWSALGKAVGCYEAAVQYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQ 316
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ R +L ++G +T AS+ K T AR A R+LLGGNGIL VA+
Sbjct: 317 LLVLRATRLEDEGRLTGPMASMAKYSATRAARSIAANARDLLGGNGILIQNEVAR 371
>gi|433592698|ref|YP_007282194.1| acyl-CoA dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|448335137|ref|ZP_21524289.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pellirubrum DSM 15624]
gi|433307478|gb|AGB33290.1| acyl-CoA dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|445618073|gb|ELY71657.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pellirubrum DSM 15624]
Length = 387
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q +D L EE+ +R RE +E+ + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLEDDLDQEERMIRDTAREFVEEHVKPDIGDHFEAGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPEMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDQSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGEMRPQHVSMSKRNNVRMARNQARIAREMLGGNGITTDY 350
>gi|383620473|ref|ZP_09946879.1| acyl-CoA dehydrogenase domain-containing protein [Halobiforma
lacisalsi AJ5]
gi|448697833|ref|ZP_21698711.1| acyl-CoA dehydrogenase domain-containing protein [Halobiforma
lacisalsi AJ5]
gi|445781199|gb|EMA32060.1| acyl-CoA dehydrogenase domain-containing protein [Halobiforma
lacisalsi AJ5]
Length = 387
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D Q + L EE+ +R RE +E+ + P +AE++E+ FP +IPK+G L ++
Sbjct: 3 DIVQLEQDLDQEERMIRDTAREFVEEHVKPDIAEHFEEGTFPTELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETYAERDSDGYVLNGSKTWITNSPIADVAVVWARDRSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 EPVRGFLVETDRDGVTTNKITEKLSLRASITGEIGLNDVRVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y ++R+QFG P+ FQ+ QQKL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDSFEEARQYAQDREQFGGPIGRFQLQQQKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+R+ +L E+G + P H SL K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRVAELKERGDLRPAHISLAKRNNVRMARDQSRVAREMLGGNGITTDY 350
>gi|388492090|gb|AFK34111.1| unknown [Lotus japonicus]
gi|388493044|gb|AFK34588.1| unknown [Lotus japonicus]
Length = 178
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/137 (87%), Positives = 127/137 (92%)
Query: 260 LKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAP 319
++KVFV DEDR+ G++SFQD SKVLAVSRVMVAWQPIGISMG+YDMCHRYLKERKQFGAP
Sbjct: 1 MRKVFVSDEDRVAGLDSFQDISKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAP 60
Query: 320 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALG 379
LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE G MT G AS GKSWIT RARET ALG
Sbjct: 61 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYETGKMTVGQASSGKSWITLRARETAALG 120
Query: 380 RELLGGNGILSDFLVAK 396
RELLGGNGIL+DFLVAK
Sbjct: 121 RELLGGNGILADFLVAK 137
>gi|325961970|ref|YP_004239876.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468057|gb|ADX71742.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 394
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 210/381 (55%), Gaps = 11/381 (2%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FP D DLL E + +R+ ++ ++ +YW + EFPF ++ ++G
Sbjct: 12 FPDA--DLMYVADLLPPHEHMRYLDIRDFLQADVRKASIDYWNREEFPFGLLAEMG---- 65
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G + G S + E+AR D S S +H+ L + T+ L GS EQK+++L
Sbjct: 66 -GHGLGALQLDGSSTLFKGLMYVELARADVSLSALAGIHNELIIGTLDLLGSPEQKRRWL 124
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFA 219
P L + +ALTEP +GSD + T+ +++GG W+L G KRWIG T AD +++A
Sbjct: 125 PGLKTFTRLGAFALTEPEHGSDIAGGLATSARLDGGEWVLNGSKRWIGAGTIADFALVWA 184
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ QI ++V+ D PG KI NKIGLRI+QN DI L+ V +P + LPG F
Sbjct: 185 RDEADLQIKAFIVETDRPGYAAAKINNKIGLRIMQNADITLQDVRIPAANLLPGATGFGR 244
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+++L SR V WQ GI + +D+ Y R+QFG LA FQ+ QQ+L +LGN A
Sbjct: 245 ANELLRDSRAWVGWQAAGIQLAAFDVARAYSLGRRQFGRELAGFQLVQQQLADILGNATA 304
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI- 398
+ + +L ++ E+G + A++ K+ T AR +VA+GR LLGGNGI +D+ +AK+
Sbjct: 305 SLALMVQLARVQEQGKLEMVQAAMAKATTTRLARASVAMGRSLLGGNGISADYEMAKLFG 364
Query: 399 --MLFFLHLDHFVCKNLIVSN 417
+ + + + +LIV
Sbjct: 365 DAEILYTYEGSYEINSLIVGR 385
>gi|296119940|ref|ZP_06838494.1| acyl-coenzyme A oxidase 4, peroxisomal [Corynebacterium
ammoniagenes DSM 20306]
gi|295967094|gb|EFG80365.1| acyl-coenzyme A oxidase 4, peroxisomal [Corynebacterium
ammoniagenes DSM 20306]
Length = 402
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 209/363 (57%), Gaps = 16/363 (4%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P +D D L EE + E ++ +I P + EYW++ EFPFH++P+L
Sbjct: 19 PFPHTDILGVADQLEPEESKRLHALHEFLQTKIRPEVGEYWDREEFPFHLLPELAK---- 74
Query: 102 GGTIKGYGCPGHSVTGAA-----IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
YG +V+G + +A AE+ R D S S + +H+ L + I S+ Q+
Sbjct: 75 ------YGLGEIAVSGTSRLYRGLAYAEVTRADVSLSALVGIHNELIVALIDALASDAQR 128
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
+K+L L I C+ALTEP +GSD A L TTA K GW++ G KRWIG TFAD
Sbjct: 129 EKWLDGLRSFEKIGCFALTEPEHGSDIAGGLATTAEKTADGWVINGTKRWIGGGTFADFA 188
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
+ FAR+T N++ G++V+ G++ KI K+GLRI+QN DI V +P E+ +PG
Sbjct: 189 ICFARDTADNEVKGFIVEMGREGVSAEKISRKMGLRIMQNADITFDSVLIPHENIIPGAQ 248
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF +T+ L SR VAWQ G+ +G++DM Y R+QFG P+A FQ+ Q+ L ++LG
Sbjct: 249 SFANTNDYLCSSRAWVAWQGAGLQLGIFDMAREYAVSREQFGRPIAKFQLVQEALTRILG 308
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
N + + ++ L E G + HA+L K+ T ARE+ A GR + GGNGIL+D+ ++
Sbjct: 309 NATVSLSMMAQVAHLQEAGKLEMPHAALAKATTTRLARESAAAGRNIGGGNGILTDYDLS 368
Query: 396 KVI 398
K++
Sbjct: 369 KMM 371
>gi|313885733|ref|ZP_07819482.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619098|gb|EFR30538.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
Length = 401
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 204/364 (56%), Gaps = 8/364 (2%)
Query: 38 ASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGA 97
A FP D Y+F D LT +E V M+V +EK + P++ E+ EKAEFP
Sbjct: 8 AQLFP---EDLYKFSDCLTEKEVDVLMEVEAALEKHLRPVITEHSEKAEFPMDAFYAFVN 64
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEI----ARVDASCSTFILVHSSLAMLTIALCGSE 153
+ Y T + A + +R D S +TF VH L T L GS
Sbjct: 65 EVAIMSDPRLYEDREDKYTPSQYYYAYLWYLMSRFDTSIATFFGVHGGLGYYTFLLGGSP 124
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EQ ++++P L C+ LTEP +GSD A L TTAT+ WI+ G+KRWIG + A
Sbjct: 125 EQVERWVPKLQNFELQTCFGLTEPEHGSDIAGGLATTATRQGDKWIINGEKRWIGGAGSA 184
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DVL IFAR+T N+I ++++K GLT+ KIENKI LR+VQNG I +K V V D+ RL
Sbjct: 185 DVLPIFARDTEDNKIKCFILEKGQKGLTIDKIENKIALRMVQNGHITMKDVEVADDHRLV 244
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+N F+D ++VL V+R VA G S G + +Y KERKQF L FQ+ Q+KL +
Sbjct: 245 NINGFKDVARVLYVTRSGVANLAAGNSAGAFRAALKYTKERKQFTKSLVEFQLVQEKLAR 304
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M N+ + + + ++ KL G +S+ K + + R+RETVAL RE+ GGNGI D+
Sbjct: 305 MQANVISELALITQIAKLQTSGEFDEVRSSIAKMFNSLRSRETVALAREVCGGNGITYDY 364
Query: 393 LVAK 396
VA+
Sbjct: 365 DVAR 368
>gi|429191164|ref|YP_007176842.1| acyl-CoA dehydrogenase [Natronobacterium gregoryi SP2]
gi|448326646|ref|ZP_21515993.1| acyl-CoA dehydrogenase domain-containing protein [Natronobacterium
gregoryi SP2]
gi|429135382|gb|AFZ72393.1| acyl-CoA dehydrogenase [Natronobacterium gregoryi SP2]
gi|445610451|gb|ELY64222.1| acyl-CoA dehydrogenase domain-containing protein [Natronobacterium
gregoryi SP2]
Length = 387
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 198/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +++ + P + +++E FP ++PK+G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTTREFVDEHVRPAIGDHFEAGTFPTELVPKMGDLGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK ++LP L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKTEWLPKLGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S + T AT+ + G++L G K WI NS ADV V++AR+ +T
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETYATEHDDGYVLTGSKTWITNSPIADVAVVWARDRSTEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI K+ LR G+I L V+VP+E+ LPGV+ + L
Sbjct: 183 EPVRGFLVETDRDGVTTNKITEKLSLRASITGEIGLNDVYVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y ++R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDAFEEARQYAQDREQFGGPIGRFQLQQEKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+ M P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERDDMQPQHVSMAKRNNVRMAREQTKVAREMLGGNGITTDY 350
>gi|448330732|ref|ZP_21520011.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
versiforme JCM 10478]
gi|445611236|gb|ELY64996.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
versiforme JCM 10478]
Length = 387
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 198/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q ++ L EE+ +R RE +E+ + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLEEDLDQEERMIRDTAREFVEEHVKPDIGDHFEAGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPDMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ + +
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGAKTWITNSPIADVAIVWARDKSADD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVSTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDMRPQHVSMSKRNNVRMARNQSRIAREMLGGNGITTDY 350
>gi|403359486|gb|EJY79406.1| Acyl-CoA dehydrogenase, putative [Oxytricha trifallax]
Length = 332
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 192/315 (60%), Gaps = 15/315 (4%)
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
P ++ K L+V G KG+G P + R DAS +T+ +V + L +
Sbjct: 1 MPHFIVDKFKELKVNGLDAKGFGSP-------------VTRWDASVATYFIVSNCLGIAV 47
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWI 206
+ CG E+QK++ LP Q+ C+ LTEP GSDA+ L +TA KVEGG++L G KRWI
Sbjct: 48 VERCGGEDQKKRILPDCIQMKKSICFGLTEPTNGSDATGLLSTAKKVEGGYLLNGFKRWI 107
Query: 207 GNSTFADVLVIFARNTTT-NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFV 265
GN+TFAD ++I+ARN N+I G++V + + GL +KIENK +R+VQN DI +K VFV
Sbjct: 108 GNATFADYIIIWARNIDEGNKIQGFVVDQGSKGLKTSKIENKYSIRMVQNADIEMKDVFV 167
Query: 266 PDEDRLPGVNSF-QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
PD +RL F + +L SR+ VAW GI+ G + H+Y ERKQFG P+A FQ
Sbjct: 168 PDNNRLEKALDFGTGANNILKHSRIQVAWVATGIAAGAIEAAHKYALERKQFGKPIAGFQ 227
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+NQ+KL + + ++ +MIL+ R+ +Y++G T GH ++ K++ T AR A REL G
Sbjct: 228 VNQEKLARAISDVNSMILMCHRVSLMYQRGKATMGHIAMTKAYCTRVARGVCAAARELCG 287
Query: 385 GNGILSDFLVAKVIM 399
GNGI+ D V K M
Sbjct: 288 GNGIILDNHVMKQFM 302
>gi|448711940|ref|ZP_21701483.1| acyl-CoA dehydrogenase domain-containing protein [Halobiforma
nitratireducens JCM 10879]
gi|445791025|gb|EMA41674.1| acyl-CoA dehydrogenase domain-containing protein [Halobiforma
nitratireducens JCM 10879]
Length = 387
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 198/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P +AE++E+ FP +IP++G L ++
Sbjct: 3 DFVQLEQDLDQEERMIRDTAREFVEEHVKPDIAEHFEEGTFPTELIPEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETHAERDADGYVLNGSKTWITNSPVADVAVVWARDRSADG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKITEKLSLRASITGEIGLNNVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y ++R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAQDREQFGGPIGRFQLQQEKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+R+ +L E+G + P H SL K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRVAELKERGDLEPAHISLAKRNNVRMARDQSRIAREMLGGNGITTDY 350
>gi|448308914|ref|ZP_21498785.1| acyl-CoA dehydrogenase domain-containing protein [Natronorubrum
bangense JCM 10635]
gi|445592300|gb|ELY46488.1| acyl-CoA dehydrogenase domain-containing protein [Natronorubrum
bangense JCM 10635]
Length = 387
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EEQ +R +E +++ + P +AE++E+ FP +IP++G + ++
Sbjct: 3 DYVDLEADLDPEEQLIRETAQEFVDERVRPNIAEHYEEGTFPTELIPEMGEMGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ +A+ T A + G++L G K WI NS ADV +++AR+ ++
Sbjct: 123 EAVGCFGLTEPEHGSNPTAMETYAERDADGYVLNGSKTWITNSPIADVAIVWARDRSSED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 NPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+ +R +AW IG + ++ +Y K+R+QFG P+ FQ+ QQKL +M I L+
Sbjct: 243 SQARYGIAWGVIGAARDCFETALQYAKDREQFGGPIGRFQLQQQKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P H S+ K ARE + RE+LGGNGI SD+
Sbjct: 303 HRLADLKERGDLQPQHISMAKRNNVRMAREQSKVAREMLGGNGITSDY 350
>gi|448347222|ref|ZP_21536099.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
altunense JCM 12890]
gi|445631059|gb|ELY84302.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
altunense JCM 12890]
Length = 387
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 198/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q ++ L EE+ +R RE +++ + P + E++E+ FP +IPK+G L ++
Sbjct: 3 DFVQLEEDLGQEERMIRDTAREFVDEHVKPDIGEHFEQGTFPKDLIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPDMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDKSAAD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPG+ + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGIEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYATDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGEMRPQHVSMSKRNNVRMARDQARIAREMLGGNGITTDY 350
>gi|345303352|ref|YP_004825254.1| glutaryl-CoA dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345112585|gb|AEN73417.1| Glutaryl-CoA dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 415
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 202/359 (56%), Gaps = 5/359 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FP D + F+ +L E++ + RE + + P E ++ F + ++G L +
Sbjct: 4 FPFNPDDAFLFESMLKEEDRLIMETAREYAQSCLEPRALEGNQQGIFHMEIPREMGELGL 63
Query: 101 AGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G TI YG G S T + E+ RVD++ +F+ V SSL M I G+EEQK+KY
Sbjct: 64 LGVTIDPKYGGGGASYTAYGLIARELERVDSAYRSFMSVQSSLVMFPIEKYGTEEQKRKY 123
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
LP LA I C+ LTEP +GSD ++ TTA +V+GGWIL G K WI N+ AD+ V++A
Sbjct: 124 LPKLATGELIGCFGLTEPDHGSDPGSMETTARRVDGGWILNGTKAWITNAPIADIAVVWA 183
Query: 220 RNTT----TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
R +I G+++++D PGL+ + +NK+ LR G+I+++ VFVPD + LPGV
Sbjct: 184 RAKEHPDDEGEIMGFILERDMPGLSTPETKNKMSLRASSTGEIVMEDVFVPDANVLPGVR 243
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R +AW +G + Y RY+ ER QFG PLAA Q+ Q KL ML
Sbjct: 244 GLRGPFSCLSNARYGIAWGTVGAAEDCYQRTRRYVMERTQFGYPLAAMQLIQTKLANMLT 303
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I M L+ RL +L ++G +TP SL K +A E + R++ G NGI+ D+ V
Sbjct: 304 EITQMQLLALRLGQLADEGRVTPAQISLAKRNNAGKALEIARMARDMHGANGIVGDYRV 362
>gi|448311576|ref|ZP_21501336.1| acyl-CoA dehydrogenase [Natronolimnobius innermongolicus JCM 12255]
gi|445604738|gb|ELY58684.1| acyl-CoA dehydrogenase [Natronolimnobius innermongolicus JCM 12255]
Length = 387
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ ++ L EE+ +R RE +++ + P + +++E FP +IP++G L ++
Sbjct: 3 DFVSLEEDLDQEERMIRDTAREFVDEHVRPDIGDHYENGTFPKELIPEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A + G+++ G K WI NS +DV V++AR+ T
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAEEDGDGYVINGSKTWITNSPISDVAVVWARDQTDPD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V+VP+E+ LPGV+ + L
Sbjct: 183 APVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVYVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMAKRNNVRMARDQARIAREMLGGNGITTDY 350
>gi|163790014|ref|ZP_02184449.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
gi|159874714|gb|EDP68783.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
Length = 406
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 203/355 (57%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD Y++ LT E V ++RE +E + P+++EYWEKAEFPF K+G +R+ +
Sbjct: 19 SDLYEYSSALTDGELTVLKELREALEINLRPVLSEYWEKAEFPFEAFEKIGKVRMMDNPL 78
Query: 106 KGYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G S E+A++DAS +TF VH L T+ G+EEQ +++
Sbjct: 79 LFEGRENTRKPSELYNVFRYFELAKLDASIATFYTVHGGLFYATLLQGGNEEQIERWADK 138
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
A C+ALTEP +GSD A L TTA K WI+ G+KRWIG + AD + +FAR+
Sbjct: 139 TASYEIQGCFALTEPEHGSDIAGGLATTARKEGDTWIINGEKRWIGGAGSADEMAVFARD 198
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ ++V A G+ V KIE KI LR+ QNG I V V ++ RL VNSF+D +
Sbjct: 199 EADGKVKAFMVPGKAEGVHVQKIEGKISLRMTQNGHITFTDVKVGEDRRLQNVNSFKDVA 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+L ++R ++ G++ G ++ RY+K+R+QFG L +FQ+ Q+KL M N+ A +
Sbjct: 259 GILRITRADISHLATGLTAGAFEAALRYVKQREQFGKNLGSFQLVQEKLSIMQANVTANL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G ++S+ K R RETVAL RE++GGNGI + VA+
Sbjct: 319 SFSVRLAQMQEEGNYREVNSSMAKMHNALRMRETVALAREVVGGNGITLETDVAR 373
>gi|306826154|ref|ZP_07459489.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304431630|gb|EFM34611.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 425
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 215/389 (55%), Gaps = 13/389 (3%)
Query: 18 SSYFNLPALD-----ISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEK 72
S Y N+ AL I++A + +P D + + D LT E V + R +EK
Sbjct: 7 SEYKNVSALITNKGVITMATKEEILRELYP---EDLFHYADGLTLGEAEVLQETRRLIEK 63
Query: 73 EIAPIMAEYWEKAEFPF---HVIPKLGALRVAGGTIKGY-GCPGHSVTGAAIAIAEIARV 128
+ P++ EYWEK +FPF + + K + +G G S A E+AR
Sbjct: 64 HLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNPKLFEGREGSWKPSELYIAFLYLELARF 123
Query: 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALN 187
DAS +TF VH L TI L G E Q++++LP LA + C+ALTEP GSD A L
Sbjct: 124 DASMATFYTVHGGLCYNTILLGGDERQQKEFLPKLAAFDWQGCFALTEPLSGSDIAGGLA 183
Query: 188 TTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENK 247
TTA +V WIL G+KRWIG S ADV+ +FAR+ ++ ++V+K APG I +K
Sbjct: 184 TTAERVGDKWILNGEKRWIGGSDTADVVPVFARDVADGKVKCFIVRKGAPGYHAEPIPHK 243
Query: 248 IGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCH 307
I LR V+NG I +K V VPD DRL +N F D +++L +R VA +G++ G Y
Sbjct: 244 IALRCVRNGHITMKNVEVPDSDRLVNINGFGDVARILTFTRADVAHIAMGVTCGSYVAAL 303
Query: 308 RYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSW 367
+Y K+R+QF P+A FQI Q+KL +M N A+I R+ ++ EKG +++L K
Sbjct: 304 KYAKDREQFKRPIAKFQIVQEKLARMQANAVAVIAYSTRIAEMQEKGNELMLNSALAKMH 363
Query: 368 ITARARETVALGRELLGGNGILSDFLVAK 396
+ RETVAL RE GGNGI + VA+
Sbjct: 364 NSLVMRETVALARETCGGNGITLETDVAR 392
>gi|328958476|ref|YP_004375862.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
gi|328674800|gb|AEB30846.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
Length = 406
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 204/355 (57%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD Y++ LT E V ++RE +E + P+++EYWEKAEFPF K+G +R+ +
Sbjct: 19 SDLYEYSSALTDGELTVLKELREALEINLRPVLSEYWEKAEFPFEAFEKIGKVRMMDNPL 78
Query: 106 KGYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G S E+A++DAS +TF VH L T+ G++EQ +++
Sbjct: 79 LFEGRESTRKPSELYNVFRYFELAKLDASIATFYTVHGGLFYATLLQGGNDEQIERWAEK 138
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
A C+ALTEP +GSD A L TTA K WI+ G+KRWIG + AD + +FAR+
Sbjct: 139 TASYEIQGCFALTEPEHGSDIAGGLATTARKEGDTWIINGEKRWIGGAGSADEIAVFARD 198
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ ++V A G+ V KIE KI LR+ QNG I L V V ++ RL VNSF+D +
Sbjct: 199 EADGKVKAFMVPGKAEGVHVQKIEGKISLRMTQNGHITLTDVKVGEDRRLQNVNSFKDVA 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+L ++R ++ G++ G ++ RY+K+R+QFG L +FQ+ Q+KL M N+ A +
Sbjct: 259 GILRITRADISHLATGLTAGAFEAALRYVKQREQFGKNLGSFQLVQEKLSIMQANVTANL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G ++S+ K R RETVAL RE++GGNGI + VA+
Sbjct: 319 SFSVRLAQMQEEGNYREVNSSMAKMHNALRMRETVALAREVVGGNGITLETDVAR 373
>gi|381399998|ref|ZP_09925011.1| acyl-CoA dehydrogenase domain-containing protein [Microbacterium
laevaniformans OR221]
gi|380772683|gb|EIC06374.1| acyl-CoA dehydrogenase domain-containing protein [Microbacterium
laevaniformans OR221]
Length = 400
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P +D+YQ DLL +++ + +VR ++ E+ P++ E+WE A+FP+ ++P LG L + G
Sbjct: 9 PVDTDFYQIGDLLGDDDRNLITRVRGFVDSEVLPVINEHWELADFPYQILPALGELGIVG 68
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
I+GYGCPG + + E++R D S +T VHS LAM +IAL G +EQKQ++LP
Sbjct: 69 TAIQGYGCPGLTRLQTGLVAMELSRGDGSVNTLNAVHSGLAMGSIALLGDDEQKQRWLPE 128
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A L + +ALTEP +GSD+ AL TTA + ++++G KRWIG AD+++I+AR+T
Sbjct: 129 MAALRKLGAFALTEPEHGSDSVALETTARREGDVYVIDGAKRWIGLGHVADIVIIWARDT 188
Query: 223 TTNQINGYLVKKDA-----PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+++ ++++K+A G I KI R +Q I + + +P ++L +SF
Sbjct: 189 ADSKVKAFVLEKNADGGYPDGYEAEAITGKIAKRAIQQAHIEISGLRIPAGNKLAKSSSF 248
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+D S +L +R VAW+ +G ++ Y+ Y++ER QFG P+A++Q+ Q KL ML ++
Sbjct: 249 RDVSAILNRTRSTVAWEALGHALAAYEAAAAYVQERVQFGKPIASYQLVQNKLANMLADL 308
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARAR 373
AM L+ +R L ++G +T ASL K + AR
Sbjct: 309 TAMQLLCFRTATLQDEGRLTNEQASLAKMFTGEHAR 344
>gi|306828629|ref|ZP_07461823.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
gi|304429237|gb|EFM32323.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
Length = 425
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 37 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 96
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 97 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 156
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 157 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 216
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 217 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 276
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 277 ARILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 336
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 337 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 392
>gi|401683728|ref|ZP_10815613.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
sp. BS35b]
gi|418975645|ref|ZP_13523548.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK1074]
gi|383347317|gb|EID25304.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK1074]
gi|400186768|gb|EJO20973.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
sp. BS35b]
Length = 402
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAKVLQETRRLIEKHLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVSALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|417940906|ref|ZP_12584194.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK313]
gi|343389787|gb|EGV02372.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK313]
Length = 402
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|76801952|ref|YP_326960.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
gi|76557817|emb|CAI49401.1| acyl-CoA dehydrogenase [Natronomonas pharaonis DSM 2160]
Length = 387
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 195/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++++ FP +IPK+G L ++
Sbjct: 3 DFVQLEGDLDQEERLIRDTAREFVEEHVKPDIGEHFQEGTFPTELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A G++L G K WI NS +DV V++AR+ + +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETHAEADGDGYVLNGAKTWITNSPISDVAVVWARDRSADD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI +K+ LR G+I L V+VP+E+ LPGV+ + L
Sbjct: 183 TPVRGFLVETDRDGVTTNKITDKLSLRASITGEIGLNDVYVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R QFG P+ FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDAFEEARQYATDRDQFGGPIGRFQLQQDKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDMRPQHVSMSKRNNVRMARNQARIAREMLGGNGITTDY 350
>gi|227832702|ref|YP_002834409.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
gi|262182809|ref|ZP_06042230.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
gi|227453718|gb|ACP32471.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
Length = 402
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 222/380 (58%), Gaps = 11/380 (2%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
K+P +D + D L EEQA ++ E ++ EI P++ EYW++ E PF ++P++ +
Sbjct: 19 KYP--HADIFAVADRLVPEEQARLAEIHEFLQTEIRPVVGEYWDREELPFDLLPRMAEMG 76
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
+ G I+ S + AE+ R D S S + +H+ L + I GS EQK +
Sbjct: 77 L--GEIE---LTNTSRLYRGLVYAEVTRADVSLSALVGIHNELVLGLIDKLGSPEQKDTW 131
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
L L Q + C+ALTEP +GSD A L TTA + GW++ G KRWIG TFAD + F
Sbjct: 132 LAGLRQFTKVGCFALTEPDHGSDIAGGLATTAERTAEGWVINGAKRWIGAGTFADFAITF 191
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+T ++I ++V+ D G+T +KI K+GLRI+QN D+ V +P E+ +PG SF
Sbjct: 192 ARDTADDEIKAFIVELDRDGVTRSKISRKMGLRIMQNADLNFDNVLIPHENLIPGAESFA 251
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
+ + L SR V WQ G+ +G++D Y +R+QFG P+A FQ+ Q++L ++LGN
Sbjct: 252 NVNDFLCYSRAWVGWQGAGLQLGIFDKAREYAVKREQFGRPIAKFQLVQEQLSRILGNAT 311
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
A + + +L ++ E+G + A+L K+ T ARE+ A GR + GGNGIL+++ ++K++
Sbjct: 312 ASLAMMAQLAEVQEQGKLEMPFAALAKATTTRLARESAAAGRNIGGGNGILTEYDLSKMM 371
Query: 399 ---MLFFLHLDHFVCKNLIV 415
+ F + + +LIV
Sbjct: 372 DDAEILFTYEGTYDINSLIV 391
>gi|419779883|ref|ZP_14305738.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK100]
gi|383185816|gb|EIC78307.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK100]
Length = 402
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASIATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR ++NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCIRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|448354973|ref|ZP_21543727.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
hulunbeirensis JCM 10989]
gi|445636317|gb|ELY89479.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
hulunbeirensis JCM 10989]
Length = 387
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 196/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E+ FP +IP++G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEEGTFPTELIPEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S + T A G++L G K WI NS +DV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETHAEADGDGYVLNGSKTWITNSPISDVAIVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G++ KI K+ LR G+I L V VP+ + LPGV+ + L
Sbjct: 183 NPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNNVHVPEANVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y ++R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYAQDREQFGGPIGRFQLQQRKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H SL K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDMQPHHVSLSKRNNVRMARDQTRVAREMLGGNGITTDY 350
>gi|448319262|ref|ZP_21508767.1| glutaryl-CoA dehydrogenase [Natronococcus jeotgali DSM 18795]
gi|445596471|gb|ELY50557.1| glutaryl-CoA dehydrogenase [Natronococcus jeotgali DSM 18795]
Length = 387
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLDREERMIRDTAREFVEERVKPDVGDHFESGTFPTELIPKMGDLGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+K+LP+L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIRAYGSEAQKEKWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT--T 224
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ ADV +++AR+ +
Sbjct: 123 EAVGCFGLTEPGHGSNPSAMETTAERDGDGYVLNGSKTWITNAPIADVAIVWARDRSGED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G++ +I+ K+ LR G++ L V VP+E LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGVSTNEIDGKLSLRASITGEVGLNDVSVPEESVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARAYATEREQFGGPIGRFQLQQEKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMAKRNNVRTAREQSRVAREMLGGNGITTDY 350
>gi|289582554|ref|YP_003481020.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba magadii
ATCC 43099]
gi|448282020|ref|ZP_21473312.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba magadii
ATCC 43099]
gi|289532107|gb|ADD06458.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
43099]
gi|445577215|gb|ELY31654.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba magadii
ATCC 43099]
Length = 387
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E+ FP +I ++G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEEGTFPTELISEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S + T A G++L G K WI NS +DV +++AR+ ++
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETYAEADGDGYVLNGSKTWITNSPISDVAIVWARDRSSED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 NPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNNVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y ++R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYAQDREQFGGPIGRFQLQQRKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H SL K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDMQPHHVSLSKRNNVRMARDQTRVAREMLGGNGITTDY 350
>gi|414157593|ref|ZP_11413890.1| hypothetical protein HMPREF9188_00164 [Streptococcus sp. F0441]
gi|410872029|gb|EKS19974.1| hypothetical protein HMPREF9188_00164 [Streptococcus sp. F0441]
Length = 402
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKYLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVSALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|421489258|ref|ZP_15936641.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK304]
gi|400366261|gb|EJP19296.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK304]
Length = 402
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKYLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|268316992|ref|YP_003290711.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|262334526|gb|ACY48323.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
4252]
Length = 415
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 203/359 (56%), Gaps = 5/359 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FP D + F+ +L E++ + RE + + P E ++ F + ++G L +
Sbjct: 4 FPFNPDDAFLFESMLKEEDRLIMETAREYAQSCLEPRALEGNQQGIFHMEIPREMGELGL 63
Query: 101 AGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G TI YG G S T + E+ RVD++ +F+ V SSL M I G+EEQK+KY
Sbjct: 64 LGVTIDPKYGGGGASYTAYGLIARELERVDSAYRSFMSVQSSLVMFPIEKYGTEEQKRKY 123
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
LP LA I C+ LTEP +GSD ++ TTA +V+GGWIL G K WI N+ AD+ V++A
Sbjct: 124 LPKLATGELIGCFGLTEPDHGSDPGSMETTARRVDGGWILNGTKAWITNAPIADIAVVWA 183
Query: 220 RNTT----TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
R +I G+++++D PGL+ + +NK+ LR G+I+++ VFVPD + LPGV
Sbjct: 184 RAKEHPDDEGEIMGFILERDMPGLSTPETKNKMSLRASSTGEIVMEDVFVPDANVLPGVR 243
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R +AW +G + Y RY+ ER QFG PLAA Q+ Q KL ML
Sbjct: 244 GLRGPFSCLSNARYGIAWGTVGAAEDCYQRTRRYVMERTQFGYPLAAMQLIQTKLANMLT 303
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I M L+ +RL +L ++G +TP SL K +A E + R++ G NGI+ ++ V
Sbjct: 304 EITQMQLLVFRLGQLADEGKVTPAQISLAKRNNAGKALEIARMARDMHGANGIVGEYRV 362
>gi|417794014|ref|ZP_12441277.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK255]
gi|334271124|gb|EGL89518.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
oralis SK255]
Length = 402
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKYLRPVINEYWEKPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +KI LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYHAEPIPHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +G++ G Y +Y K+R+QF P+A FQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIAMGVTCGSYVSALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ EKG +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 IAYSTRIAEMQEKGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|448342654|ref|ZP_21531600.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema gari
JCM 14663]
gi|445625049|gb|ELY78419.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema gari
JCM 14663]
Length = 387
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 195/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE + + + P + E++E+ FP +IPK+G L ++
Sbjct: 3 DFVQLEADLGQEERMIRDTAREFVNEHVKPDIGEHFEQGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK ++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKAEWLPEMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +T
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDKSTAD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYATDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGEMRPQHVSMSKRNNVRMARNQARIAREMLGGNGITTDY 350
>gi|358444917|ref|ZP_09155533.1| putative acyl-CoA dehydrogenase [Corynebacterium casei UCMA 3821]
gi|356609148|emb|CCE53753.1| putative acyl-CoA dehydrogenase [Corynebacterium casei UCMA 3821]
Length = 402
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 208/358 (58%), Gaps = 6/358 (1%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P +D D L EE K+ E ++ EI P + EYW++ EFPF ++P+L +
Sbjct: 19 PFPHADILGVADQLNVEEAERLQKLHEFLQTEIRPAVGEYWDREEFPFELLPRLAEFGL- 77
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G I G S +A AE+ R D S S + +H+ L + I S+ Q++K+L
Sbjct: 78 -GEI---ALSGTSRLYRGLAYAEVTRADVSISALVGIHNELVVALIDALASDAQREKWLE 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
L + C+ALTEP +GSD A L TTA + + GW++ G+KRWIG TFAD + FAR
Sbjct: 134 GLRSFEKLGCFALTEPDHGSDIAGGLATTAQRTKDGWVINGEKRWIGGGTFADFAICFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+T N + G++V+ D G++ KI K+GLRI+QN +I + V +P ++ +PG SF +T
Sbjct: 194 DTEDNAVKGFIVEMDRDGVSAEKISRKMGLRIMQNANIHFEDVVIPHDNLIPGAESFANT 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+ L SR VAWQ G+ +G++D Y R QFG P+A FQ+ Q+ L ++LGN
Sbjct: 254 NDFLCSSRAWVAWQGAGLQLGIFDKAREYAVSRDQFGRPIAKFQLIQEALSRILGNATVS 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ + ++ + E G + HA+L K+ T ARE+ A GR + GGNGIL+D+ ++K++
Sbjct: 314 LSMMAQIARKQEAGELEMPHAALAKATTTRLARESAAAGRNIGGGNGILTDYELSKMM 371
>gi|444305375|ref|ZP_21141158.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
gi|443482293|gb|ELT45205.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
SJCon]
Length = 398
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 206/363 (56%), Gaps = 13/363 (3%)
Query: 38 ASKFP-PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
A++ P P SD D LL+ +E A+R ++R+ ++ I P +A +++ A FP + P+LG
Sbjct: 4 AAEVPGPDPSDVLALDGLLSPDELALRQRIRDFTDQRIRPGIAAWYDAAVFPLELAPELG 63
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L V G ++GYGCPG S +A E+ D+ TF+ V SLAM I GSEEQK
Sbjct: 64 ELGVLGMHLEGYGCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHKWGSEEQK 123
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTA----TKVEGGWILEGQKRWIGNSTFA 212
Q++LP +A I C+ALTEPA GSD S++ T+A T + GW+L+G KRWIG ++ A
Sbjct: 124 QEWLPRMAAGEVIGCFALTEPAAGSDPSSMTTSARRDGTGDQAGWVLDGTKRWIGLASVA 183
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV+V++A T + ++G+LV PG+T T I K+ +R D++ V + E LP
Sbjct: 184 DVMVVWA--MTDDGVHGFLVPAGTPGVTATPITQKLSMRASVQCDVVFDGVRLGPEALLP 241
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L +R +AW +G + Y Y +ER QFG PLA +Q+ Q+KLV
Sbjct: 242 AARGLRAPLTCLNEARYGIAWGAMGAARDSYQAALAYSQERLQFGKPLAGYQLTQEKLVN 301
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGIL 389
ML IQ ++ L +L + G + P SLGK RE +A+ RE +LGGNGI
Sbjct: 302 MLVEIQKGTMLALHLGRLKDAGMLKPEQVSLGK---LNNVREALAIAREARSVLGGNGIT 358
Query: 390 SDF 392
D+
Sbjct: 359 LDY 361
>gi|227505420|ref|ZP_03935469.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
gi|227197963|gb|EEI78011.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
Length = 391
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 205/354 (57%), Gaps = 8/354 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+ D +++++ V + R E + P++ +WEK+E+P ++ +LG L +
Sbjct: 10 TDFLGVFDGISAQDAEVWARARSFRE-DCLPVINGHWEKSEYPLELVRRLGELDL---MT 65
Query: 106 KGYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G PGH + GA +A+ E+ R DAS T + V + LAM +IA+ GSEEQ+ +YLP+
Sbjct: 66 DGLDVPGHESMTARGAGLALMEVTRADASMGTVVAVQAGLAMRSIAMLGSEEQRSRYLPA 125
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A + + + LTEP +GSD+ AL TTA + W+L G+K+WIGN V VI+AR
Sbjct: 126 MASCSLLGAFGLTEPLHGSDSIALETTAVRDGDSWVLNGEKKWIGNGASGGVTVIYARME 185
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N + G++V +DAPG + T I K+ LR + I+L+ +P +RLPG +F+D S+
Sbjct: 186 DGN-VGGFIVPQDAPGYSATVIAGKLSLRAIHQAHIVLEDCRIPASNRLPGCQTFKDVSR 244
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
VL +R+ V+W +G ++ Y+ Y+ ER QFG LA QI QQ+L M+ ++ M+L
Sbjct: 245 VLTATRIGVSWMALGSAVACYETARNYVMERVQFGRELAKAQIIQQRLANMVLDLNQMML 304
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ E G +TP AS K T AR + R++LGG GIL + +A+
Sbjct: 305 TCREVAAREEAGTLTPPQASAAKLHNTRAARRIASDARDMLGGVGILLENDIAR 358
>gi|163840586|ref|YP_001624991.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162954062|gb|ABY23577.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 429
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 203/359 (56%), Gaps = 6/359 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P +D DLL + E+ VRE +++ I P YW + EFPF ++ +L
Sbjct: 45 LPLPDADLMGMIDLLPAAERLRYAAVREFLQRRIRPESIGYWNREEFPFDLLAEL----- 99
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
A + G S + E+AR D S S + +H+ L + I GSE Q++++L
Sbjct: 100 AEHGLGELQLDGSSQLFKGLMYFEVARADVSLSALVGIHNELIVGMIDRLGSEAQRERWL 159
Query: 161 PSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
P L + +ALTEP +GSD A L TTA ++G W++ G KRWIG+ T AD +++A
Sbjct: 160 PGLRNFRELGAFALTEPDHGSDIAGGLETTAELLDGEWVINGAKRWIGSGTIADFALVWA 219
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ QI G++V+ D PG +KIE+K+GLRI+QN I+L V +P+ + LP +F
Sbjct: 220 RDVADQQIKGFIVETDRPGYQASKIEHKMGLRIMQNAHIVLDNVRIPEANLLPEATNFAA 279
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+++L SR V WQ GI G +D+ Y R QFG PLA FQ+ Q L ++LGN +
Sbjct: 280 ANELLRDSRAWVGWQAAGIQFGAFDIGRDYALARIQFGRPLAKFQLIQLSLSEILGNATS 339
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ + + ++ E+G+ A++ K+ T +RE+VA GR LLGGNG+ SD+ +AK+
Sbjct: 340 SLALMLQFARMQEEGSAQMPQAAMVKATTTRLSRESVAKGRALLGGNGVTSDYEMAKLF 398
>gi|11498596|ref|NP_069824.1| glutaryl-CoA dehydrogenase [Archaeoglobus fulgidus DSM 4304]
gi|2649607|gb|AAB90252.1| glutaryl-CoA dehydrogenase (gcdH) [Archaeoglobus fulgidus DSM 4304]
Length = 395
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 195/349 (55%), Gaps = 3/349 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW-EKAEFPFHVI-PKLGALRVAGGT 104
D+Y D+LL+ E++ VR VRE +EKE+ P++A+ W E+ FH + K G L + G
Sbjct: 6 DFYNVDELLSDEDRLVRQSVREFLEKEVVPLVADAWHEEKPLNFHELGKKFGELGMLGTF 65
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGCPG + T + E+ RVD++ +F+ V S L M I GSEEQK +YLP L
Sbjct: 66 LPEEYGCPGMTYTTFGVVCQEVERVDSALRSFVAVTSGLVMYPIWRYGSEEQKGEYLPKL 125
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A+ I + LTEP +GSD ++ TA + W+L G K WI + AD+ V++AR+
Sbjct: 126 ARGEIIGAFGLTEPNHGSDPGSMEATARRDGDEWVLNGTKTWISEADVADIAVVWARDVE 185
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++V++ G T I K +R G++ L VP+E+RLP
Sbjct: 186 DGKIKGFIVERGTKGFQQTAITKKASMRAGSVGELGLVNCRVPEENRLPEARGLGAPLSC 245
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W IG +M Y+ Y KERKQFGAPLA++Q+ Q+KLV ML I L+
Sbjct: 246 LNQARFGISWGAIGAAMDCYETALNYTKERKQFGAPLASYQLVQEKLVNMLIEITKGQLL 305
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL KL ++G T S+ K AR RELLG NGI D+
Sbjct: 306 AWRLAKLMDEGKATTEQISMAKKNNVRVARYCARTARELLGANGISLDY 354
>gi|397771891|ref|YP_006539437.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema sp.
J7-2]
gi|397680984|gb|AFO55361.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema sp.
J7-2]
Length = 387
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE + + + P + E++E+ FP +IPK+G L ++
Sbjct: 3 DFVQLEADLGQEERMIRDTAREFVNEHVKPDIGEHFEQGTFPTELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK ++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKAEWLPEMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDKSAAD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYATDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGEMRPQHVSMSKRNNVRMARNQARIAREMLGGNGITTDY 350
>gi|435845753|ref|YP_007308003.1| acyl-CoA dehydrogenase [Natronococcus occultus SP4]
gi|433672021|gb|AGB36213.1| acyl-CoA dehydrogenase [Natronococcus occultus SP4]
Length = 389
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE + + + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLDQEERMIRDTAREFVAEHVKPDIGDHFEDGTFPTELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP+L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIRAYGSEAQKEEWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV V++AR+ ++
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETHAERDGDGYVLNGSKTWITNSPIADVAVVWARDRSSED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 APVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARAYATEREQFGGPIGRFQLQQEKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL L E+G M P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 YRLADLKERGEMRPQHVSMAKRNNVRTAREQSKVAREILGGNGITTDY 350
>gi|448472748|ref|ZP_21601280.1| acyl-CoA dehydrogenase [Halorubrum aidingense JCM 13560]
gi|445819656|gb|EMA69495.1| acyl-CoA dehydrogenase [Halorubrum aidingense JCM 13560]
Length = 387
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 196/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R R +++ + P + +++E FP +IP++G + +
Sbjct: 3 DYVGLESDLGEEERLIRDTARRFVDERVRPDIGDHFEAGTFPTDLIPEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T I + E+ D+ + V +L M I GS+EQK+++LP+L +
Sbjct: 63 GYGLPNVSETAYGILMQELEACDSGLRSMASVQGALVMYPIHAYGSDEQKERWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV V++AR+T+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAVVWARDTSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I +K+ LR G+I L+ VP+E+ LPGV+ + L
Sbjct: 183 SPVRGFLVETDRDGVTTAEIHDKLSLRASITGEISLQNARVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARDAFEQAREYALDRDQFGGPIARFQLQQEKLAEMATQITTAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITTDY 350
>gi|448606578|ref|ZP_21659004.1| acyl-CoA dehydrogenase [Haloferax sulfurifontis ATCC BAA-897]
gi|445738786|gb|ELZ90298.1| acyl-CoA dehydrogenase [Haloferax sulfurifontis ATCC BAA-897]
Length = 387
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 191/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLELEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE+K+ +R G+I L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEDKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|163840870|ref|YP_001625275.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162954346|gb|ABY23861.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 408
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 221/381 (58%), Gaps = 19/381 (4%)
Query: 29 SVAFPQATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEF 87
+++ +A P F +D+++F+ LL+ E+A ++RE +E+ P ++W + +
Sbjct: 5 TLSVQKAKPRQPFKELPTADFFEFESLLSPVERAKLFELREFCAREVTPFAQKWWHEEDV 64
Query: 88 PFHVIPKLGALRVAGGTIKGYGCP---GHSVTGAAIAIAEIARVDASCSTFILVHSSLAM 144
P V KL A+ G G P G+S + +A E+ + D S +H L +
Sbjct: 65 PRSVFQKLSAM--------GVGAPFRAGYSRLYSGLATLELCKADLSTGAIFGIHHELFV 116
Query: 145 LTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQK 203
I + G+EEQKQ++L + + +ALTEP +GSD + TT + +G GW+L G K
Sbjct: 117 EGIRIFGTEEQKQRFLQRSSDGQILGGFALTEPEHGSDVAGGLTTMVRRDGDGWVLNGAK 176
Query: 204 RWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKV 263
RWIGN+ D + ++AR++ QI G+++ PG++ TKIENKI +R ++N D+++K V
Sbjct: 177 RWIGNAADGDYVFLWARDSDDGQIRGFILDLSLPGISRTKIENKISMRGIKNADLVMKDV 236
Query: 264 FVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAF 323
+ + DRL V+SF DT+ +L +R+M W G+ +++ +Y ER QFG PLA F
Sbjct: 237 RLAESDRLSTVSSFADTNVLLMGTRMMAGWMAAGVQCAAFEIARKYALERLQFGKPLAKF 296
Query: 324 QINQQKLVQMLGNIQAMILVGWRLCKL---YEKGA---MTPGHASLGKSWITARARETVA 377
Q+ QQ+LV+MLGN A + + RL ++ +++G + A+L K + + +TVA
Sbjct: 297 QLVQQQLVEMLGNATASLAMSARLAQVQDAHDRGVGPELRMEQAALVKGFTSKLCLDTVA 356
Query: 378 LGRELLGGNGILSDFLVAKVI 398
GR LLGGNGI++DF +AK+
Sbjct: 357 KGRSLLGGNGIVTDFGMAKIF 377
>gi|284163794|ref|YP_003402073.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
gi|284013449|gb|ADB59400.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
5511]
Length = 387
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + L EE+ +R RE + + + P + E++E FP +IPK+G L ++
Sbjct: 3 DFVDLEADLDQEERMIRDTAREFVTEHVTPDIGEHFENGTFPKEIIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GY P S T + + E+ D+ + V +L M I GSEEQK+++LP+L +
Sbjct: 63 GYSSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPALGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ T A + G+IL G K WI NS +DV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAERDGDGYILNGSKTWITNSPISDVAVVWARDQSDPD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 TPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMAKRNNVRTARDQARIAREMLGGNGITTDY 350
>gi|448320386|ref|ZP_21509873.1| acyl-CoA dehydrogenase domain-containing protein [Natronococcus
amylolyticus DSM 10524]
gi|445605851|gb|ELY59766.1| acyl-CoA dehydrogenase domain-containing protein [Natronococcus
amylolyticus DSM 10524]
Length = 387
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 196/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLDQEERMIRDTAREFVEEHVKPDIGDHFEAGTFPEELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LPS+ +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPSMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A G++L G K WI NS ADV V++AR+ ++
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETYAEADADGYVLNGSKTWITNSPIADVAVVWARDRSSED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G++ K+ K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGVSTNKLTEKLSLRASITGEIGLNDVRVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARDCFEEARAYATEREQFGGPIGRFQLQQEKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMQPQHVSMAKRNNVRTARDQSRVAREMLGGNGITTDY 350
>gi|448350708|ref|ZP_21539520.1| acyl-CoA dehydrogenase 1 [Natrialba taiwanensis DSM 12281]
gi|445636277|gb|ELY89440.1| acyl-CoA dehydrogenase 1 [Natrialba taiwanensis DSM 12281]
Length = 387
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 195/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEAGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S++ T A G+++ G K WI NS +DV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSSMETDAEADGDGYVINGSKTWITNSPISDVAIVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 DPVRGFLVETDRNGITTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y +R+QFG P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYATDREQFGGPIAQFQLQQRKLAEMATQITLSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLADLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|448304446|ref|ZP_21494384.1| acyl-CoA dehydrogenase [Natronorubrum sulfidifaciens JCM 14089]
gi|445590879|gb|ELY45091.1| acyl-CoA dehydrogenase [Natronorubrum sulfidifaciens JCM 14089]
Length = 387
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT EE+ +R RE +++++ P + +++E FP +IPK+G + ++
Sbjct: 3 DYLDLEAELTDEERLIRDTAREFVDEQVRPDIGDHFENGTFPKELIPKMGEMGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ +A+ T A + G++L G K WI NS ADV +++AR+ +++
Sbjct: 123 EAVGCFGLTEPEHGSNPTAMETYAERDADGYVLNGSKTWITNSPIADVAIVWARDRSSDD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 TPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R+QFG P+ FQ+ QQKL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARNCFETARQYATDREQFGGPIGRFQLQQQKLAEMATQITLAQLLI 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLTELKERGELRPQHVSMAKRNNVRMARDQSRVAREMLGGNGITTDY 350
>gi|448684856|ref|ZP_21692943.1| glutaryl-CoA dehydrogenase [Haloarcula japonica DSM 6131]
gi|445782787|gb|EMA33628.1| glutaryl-CoA dehydrogenase [Haloarcula japonica DSM 6131]
Length = 387
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY +D L EE+ VR RE +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEDDLGEEERMVRDTAREFVENEVKPDVGQHWIDGTFPTDLITEMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G+T KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 NPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|448308075|ref|ZP_21497956.1| acyl-CoA dehydrogenase [Natronorubrum bangense JCM 10635]
gi|445594487|gb|ELY48641.1| acyl-CoA dehydrogenase [Natronorubrum bangense JCM 10635]
Length = 387
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 199/348 (57%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY ++ +T EE+ +R RE +++++ P + E++E FP +IP++G + ++
Sbjct: 3 DYLGLEEDITDEERLIRDTAREFVDEQVRPDIGEHFENGTFPKELIPEMGEMGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ + C+ LTEP +GS+ +A+ T A + G++L G K WI NS ADV +++AR+ +++
Sbjct: 123 DAVGCFGLTEPEHGSNPTAMETYAERDADGYVLNGSKTWITNSPIADVAIVWARDRSSDD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 TPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARDCFETARQYATDREQFGGPIGRFQLQQEKLAEMATQISLAQLLV 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+ + P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 YRLTELKERSDLRPQHVSMAKRNNVRMAREQSKVAREMLGGNGITTDY 350
>gi|300780648|ref|ZP_07090503.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
gi|300533634|gb|EFK54694.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
Length = 399
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 200/361 (55%), Gaps = 1/361 (0%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKL 95
P + +DYYQ + E+ K R+ + P + E WEKAE+ HV+ +
Sbjct: 6 NPVHELLDPKTDYYQVFADVEGEDLEWWKKARDFCDY-ARPYVNEGWEKAEYQLHVVEEA 64
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G + I G P SV A + E+AR DAS T V LAM +IA+CGSEEQ
Sbjct: 65 GKRGLVRDGIDIEGEPHMSVRAARLMAFELARTDASLGTAFGVQGGLAMQSIAMCGSEEQ 124
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
K KYL ++++L +ALTEP +GSD+ L TTA + W++ G+K+WIG+ + +
Sbjct: 125 KAKYLKAMSKLEIRGAFALTEPDHGSDSIGLETTAERDGDEWVINGEKKWIGHGSVGHIA 184
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++AR+T+ Q+ G++V +D G I K LR + I L V V ++ RLP N
Sbjct: 185 VVWARDTSDGQVKGFIVDQDQDGYEAETITGKASLRGIPQAHIKLNNVRVSEDRRLPNAN 244
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF+DT+KVLA +R+ VAW +G++ Y+ Y + R QFG PL QI QQ+L ML
Sbjct: 245 SFRDTAKVLAGTRISVAWASLGLATDCYEKALDYAQRRTQFGRPLVKNQIIQQRLADMLQ 304
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
++ +M L RL +L E G +T A+L K T AR+ A R++ GG GIL + VA
Sbjct: 305 DLTSMFLYCRRLLELEESGEITEQQAALAKVHCTRAARKISADARDMFGGVGILLENDVA 364
Query: 396 K 396
+
Sbjct: 365 R 365
>gi|448488406|ref|ZP_21607242.1| acyl-CoA dehydrogenase domain-containing protein [Halorubrum
californiensis DSM 19288]
gi|445696096|gb|ELZ48189.1| acyl-CoA dehydrogenase domain-containing protein [Halorubrum
californiensis DSM 19288]
Length = 387
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 196/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L E + +R R+ +++++ P + ++++ FP +I ++G L G +
Sbjct: 3 DYVGLEADLDEEARLIRDTARQFVDEQVRPDIGDHFQAGTFPTDLISEMGDLGFYGSNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 63 GYGLPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSDEQKERWLPDLGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GSD SA+ TTA + G++L G K WI N+ ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPDHGSDPSAMETTAERDGDGYVLNGSKTWITNAPIADVAVVWARDASAEG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I++K+ LR G+I L+ V VP+E+ LPGVN + L
Sbjct: 183 RPVRGFLVETDRDGVTTNEIDDKLSLRASITGEIALQNVSVPEENVLPGVNGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEQAREYALDRDQFGGPIARFQLQQEKLAEMATQITTSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G +TP H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGDLTPKHVSMAKRNNVRMARDQSRIAREMLGGNGITTDY 350
>gi|292654389|ref|YP_003534286.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
gi|448293934|ref|ZP_21484036.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
gi|291371260|gb|ADE03487.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
gi|445569327|gb|ELY23901.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
Length = 387
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLELEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE K+ +R G+I L V VP+ED LPGV L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMNGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLTDLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|227504141|ref|ZP_03934190.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
gi|227199273|gb|EEI79321.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
Length = 402
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 223/396 (56%), Gaps = 11/396 (2%)
Query: 24 PALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWE 83
P LD S K+P +D D L +EQ+ + E ++ EI P++ E+W+
Sbjct: 3 PILDSSHPLGAHLAGIKYP--HADILGVADRLPEDEQSKLATIHEFLQTEIRPVVGEFWD 60
Query: 84 KAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
+ E PF ++P + A + G I+ G S + AE+ R D S S + +H+ L
Sbjct: 61 REELPFDLLPTMAAHGL--GEIE---LSGTSRLYRGLVYAEVTRADVSLSALVGIHNELV 115
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQ 202
+ I GS+ QK+++LP L Q + C+ALTEP +GSD A L TA K GW++ G
Sbjct: 116 VGLIDKLGSDAQKKEWLPGLRQFEKVGCFALTEPDHGSDIAGGLAATAEKTADGWVINGA 175
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
KRWIG TFAD + FAR+ N I ++V+ + G+T KI K+GLRI+QN DI
Sbjct: 176 KRWIGAGTFADFSICFARDIEDNDIKAFIVEHNREGVTTQKIARKMGLRIMQNADINYDN 235
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
V +P E+ +PG +F + + L SR V WQ GI +G++D Y +R+QFG P+A
Sbjct: 236 VVIPHENLIPGAETFANVNDFLCYSRAWVGWQGAGIQLGIFDKAREYAVKREQFGRPIAK 295
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
FQ+ Q++L ++LGN A + + ++ ++ EKG + A+L K+ T ARE+ A GR +
Sbjct: 296 FQLVQEQLARILGNATASLAMMAQVAEVQEKGLLEMPFAALAKATTTRLARESAAAGRNI 355
Query: 383 LGGNGILSDFLVAKVIM---LFFLHLDHFVCKNLIV 415
GGNGIL+++ ++K ++ + F + + +LIV
Sbjct: 356 GGGNGILTEYDLSKFMLDAEVLFTYEGTYDINSLIV 391
>gi|116671601|ref|YP_832534.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
FB24]
gi|116611710|gb|ABK04434.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
Length = 399
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 200/355 (56%), Gaps = 12/355 (3%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
ASD D LLT+EE AVR ++R+ E+ I P +A +++ A FP + P+LG L V G
Sbjct: 13 ASDVLGLDALLTAEELAVRERIRDFTEQRIKPDIARWYDDAVFPLDLAPELGELGVLGMH 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GY CPG S +A E+ D+ TF+ V SLAM I GSE+QKQ++LP +A
Sbjct: 73 LEGYRCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHKWGSEDQKQEWLPRMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATK----VEGGWILEGQKRWIGNSTFADVLVIFAR 220
I C+ALTEP GSD S++ T A + + GW+L+G KRWIG ++ A V+V++A
Sbjct: 133 AGEVIGCFALTEPTAGSDPSSMTTVARRDGSGDDAGWVLDGVKRWIGLASVAGVMVVWA- 191
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + + G+LV PG+T T I K+ +R D+ V + E LPG +
Sbjct: 192 -MTDDGVRGFLVPAGTPGVTATPINRKLSMRASIQCDVAFDGVRLGPEALLPGARGLRGP 250
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + Y+ +Y ++R QFG PLA +Q+ Q+KLV ML IQ
Sbjct: 251 FTCLNEARYGIAWGAMGAARDSYEAALKYSQDRLQFGRPLAGYQLTQEKLVNMLLEIQKG 310
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
++ L +L + G + P SLGK RE +A+ RE +LGGNGI D+
Sbjct: 311 TMLALHLGRLKDAGTLRPEQISLGK---LNNVREALAIAREARTILGGNGITLDY 362
>gi|448560595|ref|ZP_21634043.1| acyl-CoA dehydrogenase [Haloferax prahovense DSM 18310]
gi|445722245|gb|ELZ73908.1| acyl-CoA dehydrogenase [Haloferax prahovense DSM 18310]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 190/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +++++ P + E++E FP +IP++G L +
Sbjct: 3 DYLELEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTELIPQMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE K+ +R G+I L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|448500780|ref|ZP_21611942.1| acyl-CoA dehydrogenase domain-containing protein [Halorubrum
coriense DSM 10284]
gi|445696019|gb|ELZ48114.1| acyl-CoA dehydrogenase domain-containing protein [Halorubrum
coriense DSM 10284]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R R +++++ P + ++++ FP +I ++G L G +
Sbjct: 3 DYVGLEADLGEEERLIRDTARRFVDEQVRPDIGDHFQAGTFPTDLIEEMGELGFYGSNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 63 GYGLPDVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSDEQKERWLPDLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GSD SA+ T A + G++L+G K WI N+ ADV V++AR+T+
Sbjct: 123 EAVGCFGLTEPDHGSDPSAMETRAERDGDGYVLDGSKTWITNAPIADVAVVWARDTSAEG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I++K+ LR G+I L+ V VP+E+ LPGV+ + L
Sbjct: 183 RPVRGFLVETDRDGVTTNEIDDKLSLRASITGEISLQNVSVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEQAREYALDRDQFGGPIARFQLQQEKLAEMATEITTSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G +TP H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGDLTPQHVSMAKRNNVRMARDQSRVAREMLGGNGITTDY 350
>gi|448582704|ref|ZP_21646208.1| acyl-CoA dehydrogenase [Haloferax gibbonsii ATCC 33959]
gi|445732352|gb|ELZ83935.1| acyl-CoA dehydrogenase [Haloferax gibbonsii ATCC 33959]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLGLEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTELIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE K+ +R G+I L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|448322362|ref|ZP_21511835.1| acyl-CoA dehydrogenase domain-containing protein [Natronococcus
amylolyticus DSM 10524]
gi|445602350|gb|ELY56330.1| acyl-CoA dehydrogenase domain-containing protein [Natronococcus
amylolyticus DSM 10524]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + +++E FP +I ++G L ++
Sbjct: 3 DFVQLEADLDQEERMIRDTAREFVEEHVKPDIGDHFEAGTFPEDLITEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP++ +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPAMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ S + T A + + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAIGCFGLTEPEHGSNPSGMTTYAERNDDGYVLNGAKTWITNSPIADVAVVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVRVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R+QFG P+ FQ+ QQKL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYALDREQFGGPIGRFQLQQQKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMQPQHVSMSKRNNVRMAREQSKVAREMLGGNGITTDY 350
>gi|427393569|ref|ZP_18887347.1| hypothetical protein HMPREF9698_01153 [Alloiococcus otitis ATCC
51267]
gi|425730570|gb|EKU93405.1| hypothetical protein HMPREF9698_01153 [Alloiococcus otitis ATCC
51267]
Length = 401
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 204/365 (55%), Gaps = 16/365 (4%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH----VIPKLGALRVA 101
D + D LT E V ++R+ +EK + P++ EYWEK E PF V+ + L+
Sbjct: 14 EDNFNIGDNLTDGEVEVLYELRQSLEKHLRPVINEYWEKGETPFEQFKAVVNDVNYLK-- 71
Query: 102 GGTIKGYGCPGHSVTGAAIAI---AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ Y G T E++R D S STF VHS L T L G++EQ+++
Sbjct: 72 --DPRVYQTEGLFNTSQYYTFFLAYELSRFDVSISTFSGVHSGLGFYTFLLGGNDEQRER 129
Query: 159 YLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+ + C+ALTEP +GSD A L T A K WIL G KRWIG +T AD++ +
Sbjct: 130 WCEKILDFELQTCFALTEPEHGSDVAGGLETVAKKDGDKWILNGHKRWIGGATTADIIPV 189
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
FA++ T + ++V+K GL + KI KI LR+V+N D L V V +E+RL +NSF
Sbjct: 190 FAKDADTGDVKCFVVEKGQEGLEIEKIGGKISLRMVENADFTLNNVEVKEENRLQNINSF 249
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+D +KVL ++R VA+ G+ G + +Y+KERKQFG P+A FQ+ Q+K+ M N+
Sbjct: 250 KDVAKVLYITRSGVAFSATGMMAGALEATLKYVKERKQFGRPIAKFQLIQEKIAVMKANL 309
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
A + + ++ K EKG ++S+GK +I+ R RE+VA GR GGNGI + K
Sbjct: 310 TASLALCDQIVKQQEKGNFDEVNSSIGKLFISQRLRESVAAGRAACGGNGI----TLEKG 365
Query: 398 IMLFF 402
I FF
Sbjct: 366 IARFF 370
>gi|448298883|ref|ZP_21488901.1| acyl-CoA dehydrogenase [Natronorubrum tibetense GA33]
gi|445589536|gb|ELY43767.1| acyl-CoA dehydrogenase [Natronorubrum tibetense GA33]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + L EE+ +R RE +E+ + P + E++E FP +I ++G L ++
Sbjct: 3 DFVNLEKDLDQEERMIRDTAREFVEEHVKPDIGEHFENGTFPKELIGEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP++ +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPAMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ +A+ T A + G++L G K WI NS +DV +++AR+ ++
Sbjct: 123 EAIGCFGLTEPEHGSNPTAMETYAERDSDGYVLNGSKTWITNSPISDVAIVWARDRSSED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G++ KI+ K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGVSTNKIDEKLSLRASITGEIGLNNVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMSKRNNVRMARNQSRIAREMLGGNGITTDY 350
>gi|448611168|ref|ZP_21661802.1| glutaryl-CoA dehydrogenase [Haloferax mucosum ATCC BAA-1512]
gi|445743600|gb|ELZ95081.1| glutaryl-CoA dehydrogenase [Haloferax mucosum ATCC BAA-1512]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY ++ L+SEE+ VR + R +E+++ P + +++EK FP +IPK+G L +
Sbjct: 3 DYLGLEEDLSSEEKLVRDEARRFVEEQVKPDIGDHYEKGTFPMDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GSE QK+ +LP+L
Sbjct: 63 GYGLPGLGQRAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAFGSEAQKEAWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ S + T A K G++L G K WI NS ADV V++AR+ +T+
Sbjct: 123 EAVGCFGLTEPQHGSNPSGMETRAEKDADGYVLNGSKTWITNSPIADVAVVWARDVSTDG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI++K+ +R G+I L V VP+E+ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIDDKLSMRASVTGEIGLDDVRVPEENVLPGVEGMRGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L
Sbjct: 243 TQARFGIAWGVVGAARDAFEEALQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLQA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + H S+ K AR+ RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGDLRHQHVSMAKRHNVRVARDVTRTAREILGGNGITTDY 350
>gi|448681024|ref|ZP_21691170.1| glutaryl-CoA dehydrogenase [Haloarcula argentinensis DSM 12282]
gi|445768082|gb|EMA19169.1| glutaryl-CoA dehydrogenase [Haloarcula argentinensis DSM 12282]
Length = 387
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY +D L EEQ VR RE +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEDDLGEEEQMVRDTAREFVENEVKPDVGQHWIDGTFPTDLITEMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+
Sbjct: 123 EQVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+ KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVATNKIDEKLSLRASITGEISLQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|359775447|ref|ZP_09278781.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359307261|dbj|GAB12610.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 396
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 201/347 (57%), Gaps = 7/347 (2%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
+D+Y + LLT EE+ V ++RE +++E P++A++WE+ EFP + L L +
Sbjct: 13 AVADWYDAEALLTIEERQVLARLREFLDREAGPLLADFWERGEFPEQLAQPLIGLNL--- 69
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
++ + P + I E+AR DAS +T+ + L I + S EQ+++++P +
Sbjct: 70 -MEPFEAPARGIY-QGFRIFELARTDASLATWYTAQAGLFRTAIRVGASPEQQREWMPKV 127
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTA-TKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+ ++LTEP GSD A L TTA + +G W+L G KRWIG + ADVL +FAR+
Sbjct: 128 IDFSLKGVFSLTEPESGSDIAGGLATTAHRRSDGSWVLNGAKRWIGGAATADVLAVFARD 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
Q+ +LV + + G+T+ KI K LR++QN I L V VP+ RL VNSF+D +
Sbjct: 188 VADGQVKAFLVDRKSDGVTLDKIHGKTSLRMMQNAHITLDGVRVPEAMRLHHVNSFRDVA 247
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+L R VAW GI G ++ RY+ ER QFG PL +FQ+ Q+KL +MLGN+ A +
Sbjct: 248 AMLRAMRSDVAWIAAGIQAGAFEAALRYITERTQFGRPLGSFQLVQEKLARMLGNVTASL 307
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+ RL + KG ++L K + R+TVAL RE++GGNGI
Sbjct: 308 SLVVRLTEQQAKGIYRDQDSALAKMQTSLFMRDTVALAREVVGGNGI 354
>gi|258651118|ref|YP_003200274.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258554343|gb|ACV77285.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
44233]
Length = 419
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 201/369 (54%), Gaps = 12/369 (3%)
Query: 27 DISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
D +V PQ TP + A DY D L T+EE A R KVR ++ I P +A+++E A
Sbjct: 23 DGAVTEPQ-TPITDR---ARDYLNLDSLFTAEELAQRDKVRAFVDARIRPNIAQWYEDAH 78
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
FP + + G L + G +KGYGCPG S + E+ D+ TF+ V SLAM
Sbjct: 79 FPVEIAREFGDLGLLGMHLKGYGCPGRSSVEYGLTALELEAGDSGLRTFVSVQGSLAMSA 138
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWI 206
I GSEEQKQ++LP +A I C+ LTEP GSD + + T A + W+L G KRWI
Sbjct: 139 IHKHGSEEQKQQWLPGMATGELIGCFGLTEPTAGSDPAGMVTHAVRDGSDWVLNGAKRWI 198
Query: 207 GNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
G ++ A V +I+A TT + + G++V D PG T T IE K+ +R DI L V +P
Sbjct: 199 GLASVAQVAIIWA--TTEDGVRGFVVPTDTPGFTATPIEPKLSMRASIQCDITLTDVRLP 256
Query: 267 DEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQIN 326
+ LP V + L +R + W +G + Y+ RY+ +RKQF PLA FQ++
Sbjct: 257 ADAMLPNVVGLKGPFACLNEARYGIIWGAMGAARDSYETALRYMLDRKQFDTPLAGFQLS 316
Query: 327 QQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LL 383
Q++L M+ IQ ILV + +L + G + P S GK RE +A+ RE +L
Sbjct: 317 QRRLTDMVLEIQKGILVALQTGRLKDAGTLHPQQISFGK---LNNVREAIAICREARAML 373
Query: 384 GGNGILSDF 392
GGNGI D+
Sbjct: 374 GGNGITLDY 382
>gi|108804581|ref|YP_644518.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108765824|gb|ABG04706.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 401
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 201/350 (57%), Gaps = 7/350 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + D LL+ EE+AVR +VR +E+ + P + ++E+A FP ++P++GAL + G ++
Sbjct: 18 DFLELDALLSEEERAVRDRVRSFVEERVRPNIKGWYEEARFPRELVPEMGALGLLGMHLE 77
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ D+ TF+ V SLAM I GSEEQKQ++LP +A+
Sbjct: 78 GYGCAGRSAVEYGLACMELEAGDSGIRTFVSVQGSLAMSAIHRFGSEEQKQEWLPRMARG 137
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTTTN 225
+ C+ LTEP GSD +++ T A + GW++EG KRWIG ++ A+V VI+AR + N
Sbjct: 138 EAVGCFGLTEPTAGSDPASMKTFARRDGDGWVIEGAKRWIGMASIAEVAVIWARTDEEGN 197
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+LV A G + T IE K+ +R DI L+ V VP LPG + L
Sbjct: 198 PVRGFLVPTAAQGFSATNIEPKLSMRASIQCDIELRGVRVPAGAMLPGAAGLRAPFSCLN 257
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + Y+ Y R+QFG P+A+FQ+ Q+KL M+ IQ +L+
Sbjct: 258 EARYGIIWGSMGAARDCYECALEYSLRREQFGRPVASFQLTQKKLADMVVEIQKGMLLAL 317
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L ++ + GA+ SLGK RE + + RE +LGGNG+ D+
Sbjct: 318 HLGRMKDAGALKHQQISLGK---LNNVREAIKIAREARAILGGNGVTLDY 364
>gi|359778001|ref|ZP_09281275.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359304855|dbj|GAB15104.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 406
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 198/357 (55%), Gaps = 12/357 (3%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P SD D LL +E A+R ++R+ +++I P +A+++E+ FP H+ +LG L V G
Sbjct: 18 PDPSDVLALDSLLAPDELALRQRIRDFTDQQIRPDIADWYEQGVFPMHLPAQLGELGVLG 77
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
++GYGCPG S +A E+ D+ TF+ V SLAM I GSE+QKQ++LP
Sbjct: 78 MHLEGYGCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMSAIHKWGSEDQKQEWLPR 137
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTA----TKVEGGWILEGQKRWIGNSTFADVLVIF 218
+A I C+ALTEP GSD S++ T A T + GW+L+G KRWIG ++ ADV+V++
Sbjct: 138 MAAGEVIGCFALTEPTAGSDPSSMTTAARRDGTGEDAGWVLDGAKRWIGLASVADVMVVW 197
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR T + + G+LV G+T T I K+ +R D+ V + E LPG
Sbjct: 198 AR--TDDGVRGFLVPAGTEGVTATPIGRKLSMRASIQCDVTFDGVRLGPEALLPGARGLS 255
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
L +R +AW +G + Y+ RY ER QFG PL+ +Q+ Q+KLV ML +Q
Sbjct: 256 GPFSCLNEARYGIAWGAMGAARDSYEAALRYSMERLQFGKPLSGYQLTQEKLVNMLVEVQ 315
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
++ L +L + G + P SL K RE + + RE +LGGNGI D+
Sbjct: 316 KGTMLALHLGRLKDSGRLRPEQISLAK---LNNVREAITVAREARTILGGNGITLDY 369
>gi|448543887|ref|ZP_21625348.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-646]
gi|448551047|ref|ZP_21629189.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-645]
gi|448558578|ref|ZP_21633135.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-644]
gi|445706029|gb|ELZ57916.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-646]
gi|445710603|gb|ELZ62401.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-645]
gi|445712330|gb|ELZ64112.1| acyl-CoA dehydrogenase [Haloferax sp. ATCC BAA-644]
Length = 387
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLELEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPVADVAVVWARDASAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T +IE K+ +R G+I L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNEIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M + L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQLTNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|448360276|ref|ZP_21548917.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
chahannaoensis JCM 10990]
gi|445639927|gb|ELY93020.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
chahannaoensis JCM 10990]
Length = 387
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E+ FP +I ++G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEEGTFPTELISEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S + T A G+++ G K WI NS +DV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMETYAEADGDGYVINGSKTWITNSPISDVAIVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G++ KI K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 NPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVTGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y ++R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYAQDREQFGGPIGRFQLQQRKLAEMATQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDMQPQHVSMAKRNNVRMARDQTRVAREMLGGNGITTDY 350
>gi|448363572|ref|ZP_21552172.1| acyl-CoA dehydrogenase 1 [Natrialba asiatica DSM 12278]
gi|445646385|gb|ELY99374.1| acyl-CoA dehydrogenase 1 [Natrialba asiatica DSM 12278]
Length = 387
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 194/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E FP +IP +G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEAGTFPKELIPTMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S++ T A G+++ G K WI NS +DV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSSMETDAEADGDGYVINGSKTWITNSPISDVAIVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI K+ LR G+I L V+VP+ + LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGITTNKITEKLSLRASITGEIGLNDVYVPEANVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y +R+QFG P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYATDREQFGGPIAQFQLQQRKLAEMATQITLSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLADLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|389845700|ref|YP_006347939.1| glutaryl-CoA dehydrogenase [Haloferax mediterranei ATCC 33500]
gi|388243006|gb|AFK17952.1| glutaryl-CoA dehydrogenase [Haloferax mediterranei ATCC 33500]
Length = 404
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +E+++ P + +++E+ FP +IPK+G L +
Sbjct: 20 DYLELESDLTGEEKLVRDEARRFVEEQVKPDIGDHFEQGTFPMDLIPKMGELGFYAPNLD 79
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GSE QK ++LP+L
Sbjct: 80 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAFGSEAQKDEWLPALGSG 139
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ S + TTA K G++L G K WI NS ADV V++AR+ + +
Sbjct: 140 EAVGCFGLTEPQHGSNPSGMETTAEKDADGYVLNGSKTWITNSPIADVAVVWARDVSADG 199
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KIE+K+ +R G+I L V VP+E+ LPGV + L
Sbjct: 200 SPVRGFLVETDRDGVTTNKIEDKLSMRASVTGEIGLDDVRVPEENVLPGVEGMKGPLSCL 259
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L
Sbjct: 260 TQARFGIAWGVVGAARDAFEDALQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLQA 319
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L ++G + H S+ K AR+ RE+LGGNGI +D+
Sbjct: 320 HRLAELKQRGDLRHQHVSMAKRHNVRVARDVTRTAREVLGGNGITTDY 367
>gi|424865909|ref|ZP_18289765.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86B]
gi|400758482|gb|EJP72689.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86B]
Length = 385
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 195/353 (55%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D FD+ L SEE +R +R+ E+ P + E F ++ +LG L + G T+K
Sbjct: 5 DILNFDNQLDSEEILIRDSIRDYATNELMPRIQEANRNEVFDKNIYKELGELGLLGATVK 64
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + EI RVD+ + V SSLAM I GSEEQK KYLP +A+
Sbjct: 65 GYGCQGIGYVAYGLITNEIERVDSGYRSAYSVQSSLAMYAIEQFGSEEQKNKYLPEMAKG 124
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
N I C+ LTEP GSD S++ T AT +GG+IL G K WI NS ADVLVI+A++
Sbjct: 125 NLIGCFGLTEPDAGSDPSSMKTKATNTDGGFILNGSKTWITNSPIADVLVIWAKD-EDGI 183
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ GY+V++D GLT K+E K LR + G I L+ VFVP+ + LP V SF+ L +
Sbjct: 184 LRGYIVERDFNGLTTPKLEGKFSLRASETGQIFLEDVFVPESNILPEVQSFKGPFSCLNM 243
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + Y +R QF PLAA Q+ Q+KLV M I + +
Sbjct: 244 ARYGIAWGALGAAEFCLETALNYSLDRVQFDKPLAAKQLVQKKLVDMQSEIAIGLQAALK 303
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ + E+G TP SL K ++A + R++LGGNGI ++ V + M
Sbjct: 304 VGREIEQGTYTPEMISLVKRNSCSKALDIARNARDILGGNGISDEYHVIRHCM 356
>gi|313885601|ref|ZP_07819351.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619331|gb|EFR30770.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
Length = 402
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 197/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D Y + L+ E +K+RE +EKE+ P++ ++W+K FP K+ L +
Sbjct: 15 EDIYGYSHDLSENEVDFLLKLRETLEKELYPVIDDHWKKELFPMEAFKKITDLGIMTDPS 74
Query: 106 KGYGCPGHSVTGAAI---AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G T + E+ R+D+S F +VH LA T+ + GS+EQ Y P
Sbjct: 75 LFEGRENKLKTSEIFNLFRLYELNRMDSSIGAFTIVHGGLAYSTVLIGGSQEQIDYYAPK 134
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
LA +C+ LTEP +GSD A L TTA W++ G+K+WIG + ADVL IFAR+
Sbjct: 135 LASYEWHSCFGLTEPLHGSDIAGGLATTAELQGDKWVINGEKKWIGGAATADVLPIFARD 194
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
QI ++V PGLTV KI+ KI LR++QNG I + V V RL +NSF+D +
Sbjct: 195 VADGQIKCFMVPGGTPGLTVDKIDGKISLRLIQNGHIKMNNVQVDKTARLENINSFRDVA 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
K+L +R VA G+ G +Y+KER+QFG ++ FQ+ Q+KL +M N +
Sbjct: 255 KILYTTRADVAHLATGLHAGALANTLKYVKEREQFGKKISQFQLVQEKLARMQANCVTSL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ RL +L E+G +SL K R RETVALGRELLGGNGI+ + VA+ +
Sbjct: 315 ALSHRLAQLQEQGRYEEVQSSLAKMNNAYRLRETVALGRELLGGNGIIVEHDVARFFV 372
>gi|448616678|ref|ZP_21665388.1| glutaryl-CoA dehydrogenase [Haloferax mediterranei ATCC 33500]
gi|445751333|gb|EMA02770.1| glutaryl-CoA dehydrogenase [Haloferax mediterranei ATCC 33500]
Length = 387
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +E+++ P + +++E+ FP +IPK+G L +
Sbjct: 3 DYLELESDLTGEEKLVRDEARRFVEEQVKPDIGDHFEQGTFPMDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GSE QK ++LP+L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAFGSEAQKDEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ S + TTA K G++L G K WI NS ADV V++AR+ + +
Sbjct: 123 EAVGCFGLTEPQHGSNPSGMETTAEKDADGYVLNGSKTWITNSPIADVAVVWARDVSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KIE+K+ +R G+I L V VP+E+ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEDKLSMRASVTGEIGLDDVRVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L
Sbjct: 243 TQARFGIAWGVVGAARDAFEDALQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLQA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L ++G + H S+ K AR+ RE+LGGNGI +D+
Sbjct: 303 HRLAELKQRGDLRHQHVSMAKRHNVRVARDVTRTAREVLGGNGITTDY 350
>gi|448573529|ref|ZP_21641012.1| acyl-CoA dehydrogenase [Haloferax lucentense DSM 14919]
gi|445718435|gb|ELZ70125.1| acyl-CoA dehydrogenase [Haloferax lucentense DSM 14919]
Length = 387
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLGLEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQK+++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKERWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE K+ +R G+I L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATRITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLTDLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|385653355|ref|ZP_10047908.1| putative glutaryl-CoA dehydrogenase [Leucobacter chromiiresistens
JG 31]
Length = 406
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 204/342 (59%), Gaps = 1/342 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHS 114
++ E+ A R + R +++E+ P++A W++AE+P + +LG L + I G P S
Sbjct: 33 VSREDLAYRDRARSFVQEEVRPVIAGIWDRAEYPLELARRLGELDLLRDGIDVPGFPEQS 92
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
+ A++ + E+AR D S +T + V LA+ +IALCGS Q +++ LA+ + +AL
Sbjct: 93 LLAASLTMMELARGDGSIATIVGVQGGLALRSIALCGSAAQHERWFEPLARGTELGAFAL 152
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKK 234
TEP +GSD+ +L T+A + +++ G K+WIG+ + +V V++AR Q+ G+LV +
Sbjct: 153 TEPTHGSDSVSLETSAVRDGDEYVISGHKKWIGSGSVGEVSVVWARGDD-GQVQGFLVPQ 211
Query: 235 DAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQ 294
A G T IE K+ LR + I L V VP R+PG NSF DT++VL +R+ VAW
Sbjct: 212 SAEGYRATTIEGKVSLRAIWQAHIELDGVRVPASARMPGANSFADTARVLQATRLGVAWS 271
Query: 295 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354
+G ++ VY+ Y ++R QFG PLAA QI Q +L +ML + ++ + +L + E+G
Sbjct: 272 ALGHAIAVYESAVHYARQRVQFGRPLAASQIVQARLAEMLSALTSLQTLLMQLTRAEERG 331
Query: 355 AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ASLGK T AR+ R+LLGGNGIL + VA+
Sbjct: 332 ELSGPGASLGKYTATRTARDLARNARDLLGGNGILLENRVAR 373
>gi|403528210|ref|YP_006663097.1| glutaryl-CoA dehydrogenase [Arthrobacter sp. Rue61a]
gi|403230637|gb|AFR30059.1| glutaryl-CoA dehydrogenase [Arthrobacter sp. Rue61a]
Length = 391
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 194/350 (55%), Gaps = 8/350 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD D LLT++E A+R +VR+ + I P +A ++E A FP + P+LG L V G +
Sbjct: 9 SDVLALDSLLTADELALRDRVRDYTAQRIRPNIARWYEDAHFPRELAPELGELGVLGMHL 68
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGCPG + +A E+ D+ TF+ V SLAM I GSE QK+++LP +A
Sbjct: 69 DGYGCPGRTAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHKWGSEAQKEQWLPRMAA 128
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ALTEP GSD S++ T A + GW+LEG KRWIG ++ ADV+V++A+ T +
Sbjct: 129 GELIGCFALTEPTAGSDPSSMTTFARETADGWVLEGAKRWIGIASIADVMVVWAK--TED 186
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+LV G+T T IE K+ +R D+ V + E LPG + L
Sbjct: 187 GIRGFLVPAGTSGVTATPIEPKLSMRASIQCDVKFDGVRLGPEAVLPGAMGLKGPFSCLN 246
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y+ Y R QFG PLA +Q+ Q+KLV ML IQ ++
Sbjct: 247 EARYGIAWGAMGAARDSYEAALEYAGNRLQFGRPLAGYQLTQEKLVNMLVEIQKGTMLAL 306
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L +L + G + P SLGK RE + + RE +LGGNG+ D+
Sbjct: 307 HLGRLKDAGHLQPQQISLGK---LNNVREAIKIAREARTILGGNGVTLDY 353
>gi|448366140|ref|ZP_21554394.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
aegyptia DSM 13077]
gi|445654749|gb|ELZ07600.1| acyl-CoA dehydrogenase domain-containing protein [Natrialba
aegyptia DSM 13077]
Length = 387
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE +E+ + P + E++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLDQEERLIRDTAREFVEEHVKPDIGEHFEAGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ S++ T A G+++ G K WI NS +DV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSSMETYAEADGDGYVINGSKTWITNSPISDVAIVWARDRSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI K+ LR G+I L V VP+ + LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGITTNKITEKLSLRASITGEIGLNDVHVPESNVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ +Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDAFEEARQYATDREQFGGPIGQFQLQQRKLAEMATQITLSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLADLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|334338191|ref|YP_004543343.1| glutaryl-CoA dehydrogenase [Isoptericola variabilis 225]
gi|334108559|gb|AEG45449.1| Glutaryl-CoA dehydrogenase [Isoptericola variabilis 225]
Length = 414
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 209/361 (57%), Gaps = 7/361 (1%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P +DY +T EE+ ++ VR ++ E+ P++ YWE+AE PF ++ +L L
Sbjct: 21 PSDADYVGAFADVTPEEREHQLAVRAFVQDEVLPVIDGYWERAEVPFDLVKRLAELDFLR 80
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ G P S G +A E++R D S +T V LA+ +I + GS EQ ++Y
Sbjct: 81 DGVDVPGRPRISFMGEGLASMEMSRGDGSVATICGVQGGLALRSIVMHGSPEQVERYAEP 140
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKV--EG--GWILEGQKRWIGNSTFADVLVIF 218
+A+ + +ALTEP +GSD+ +L TTA + +G G+++ G+K+WIG + D+ +++
Sbjct: 141 MARGEILGAFALTEPTHGSDSVSLETTARRTVRDGVEGYVITGEKKWIGFGSCGDIAIVW 200
Query: 219 AR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
AR + Q++G++V +DAPG T IE K+ LR + I+L VFVP + LPG
Sbjct: 201 ARLVGDDGDGQVHGFVVPQDAPGYRATTIEGKVALRAIWQAHIVLDDVFVPTDAALPGAT 260
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF T+ VL +R+ VAW +G + Y+ Y K+R QFG PLAA Q+ Q++L +ML
Sbjct: 261 SFAATAAVLFATRLTVAWSAVGHATACYEAALAYAKQRIQFGRPLAAKQMVQERLTRMLS 320
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
+ M L+ R +L + G +T ASL K T +ARE A+ R+++GGNGIL + VA
Sbjct: 321 LLTQMQLLVARTTRLADAGTLTGEQASLAKYTCTRQAREIAAIARDMMGGNGILLENRVA 380
Query: 396 K 396
+
Sbjct: 381 R 381
>gi|433431167|ref|ZP_20407605.1| acyl-CoA dehydrogenase [Haloferax sp. BAB2207]
gi|448597676|ref|ZP_21654601.1| acyl-CoA dehydrogenase [Haloferax alexandrinus JCM 10717]
gi|432194159|gb|ELK50813.1| acyl-CoA dehydrogenase [Haloferax sp. BAB2207]
gi|445739137|gb|ELZ90646.1| acyl-CoA dehydrogenase [Haloferax alexandrinus JCM 10717]
Length = 387
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 188/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLGLEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQK+++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKERWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADGYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE K+ +R G+I L V VP+ED LPGV L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMNGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATRITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLTDLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|119962188|ref|YP_948732.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
gi|119949047|gb|ABM07958.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
Length = 387
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 194/350 (55%), Gaps = 8/350 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD D LLT++E A+R +VR+ + I P +A ++E A FP + P+LG L V G +
Sbjct: 5 SDVLALDSLLTADELALRDRVRDYTAQRIRPNIARWYEDAHFPRELAPELGELGVLGMHL 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGCPG + +A E+ D+ TF+ V SLAM I GSE QK+++LP +A
Sbjct: 65 DGYGCPGRTAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHKWGSEAQKEQWLPRMAA 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ALTEP GSD S++ T A + GW+LEG KRWIG ++ ADV+V++A+ T +
Sbjct: 125 GELIGCFALTEPTAGSDPSSMTTFARETADGWVLEGAKRWIGLASIADVMVVWAK--TED 182
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+LV G+T T IE K+ +R D+ V + E LPG + L
Sbjct: 183 GIRGFLVPAGTSGVTATPIEPKLSMRASIQCDVKFDGVRLGPEAVLPGAMGLKGPFSCLN 242
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y+ Y R QFG PLA +Q+ Q+KLV ML IQ ++
Sbjct: 243 EARYGIAWGAMGAARDSYEAALEYAGNRLQFGRPLAGYQLTQEKLVNMLVEIQKGTMLAL 302
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L +L + G + P SLGK RE + + RE +LGGNG+ D+
Sbjct: 303 HLGRLKDAGHLQPQQISLGK---LNNVREAIKIAREARTILGGNGVTLDY 349
>gi|448637528|ref|ZP_21675766.1| glutaryl-CoA dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
gi|448651951|ref|ZP_21680964.1| glutaryl-CoA dehydrogenase [Haloarcula californiae ATCC 33799]
gi|445764375|gb|EMA15530.1| glutaryl-CoA dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
gi|445769354|gb|EMA20428.1| glutaryl-CoA dehydrogenase [Haloarcula californiae ATCC 33799]
Length = 387
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR R+ +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEGDLGEEERMVRDTARDFVENEVKPDVGQHWIDGTFPTDLITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G+T KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 NPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|308178427|ref|YP_003917833.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307745890|emb|CBT76862.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 410
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 196/338 (57%), Gaps = 1/338 (0%)
Query: 59 EQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGA 118
+ A R K R+ + E+ + EYW+KA++P H+I KLG + + G S A
Sbjct: 41 DNAWRAKARKFILDEVKKNIHEYWDKADYPLHLIKKLGDADLLRDGLNLEGYEQMSPLAA 100
Query: 119 AIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA 178
+ E+AR D S ST + V LA+ ++ CGS+EQ QKY + + +ALTEP
Sbjct: 101 GLVNMEMARGDGSVSTIVGVQGGLAVRSVLYCGSDEQIQKYALPMLRGELPGAFALTEPT 160
Query: 179 YGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPG 238
+GSD+ +L T A KV+GG+ L G+K+WIGN + V +++AR+ ++ G++V +DA G
Sbjct: 161 HGSDSVSLETRAAKVQGGYRLSGEKKWIGNGSIGGVSIVWARDEQ-GKVRGFIVHQDAEG 219
Query: 239 LTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGI 298
+ T IENK+ LR + I ++ VFVPDED +P SF+DTS+VL +R+ VAW +G
Sbjct: 220 YSATTIENKLSLRAIWQAHIRMENVFVPDEDVMPNAQSFKDTSRVLFATRLGVAWSAVGH 279
Query: 299 SMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTP 358
+ Y+ Y K+R QFG PLA QI Q++L +M + M ++ + K G +T
Sbjct: 280 ATACYESAVNYAKQRVQFGRPLAQSQIVQERLARMQSELATMQVLVMQATKREGAGDLTG 339
Query: 359 GHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
ASL K T AR + R+LLGGNGIL+ VA+
Sbjct: 340 PQASLAKYTATRTARVIASNARDLLGGNGILTSNRVAR 377
>gi|289706039|ref|ZP_06502412.1| acyl-CoA dehydrogenase, middle domain protein [Micrococcus luteus
SK58]
gi|289557241|gb|EFD50559.1| acyl-CoA dehydrogenase, middle domain protein [Micrococcus luteus
SK58]
Length = 402
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 204/371 (54%), Gaps = 18/371 (4%)
Query: 37 PASKFPPCAS-----DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
PAS P A D + L S E+A + + ++ + P + YW+ EF F +
Sbjct: 10 PASGAPAVAPGLPHVDLLRLRGRLESAERARLDAIEDHLQTRVRPHLTRYWDAEEFAFDL 69
Query: 92 IPKLGALRVAGGTIKGYG---CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIA 148
+P L L G G G S + AEIARVD S S + +H+ L + IA
Sbjct: 70 LPGLAEL--------GLGRLVLDGSSSLFQQLVHAEIARVDLSLSALVGIHNELNLGMIA 121
Query: 149 LCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIG 207
GSE QK + L + + + LTEP +GSD A L TTAT+ W++ G KRWIG
Sbjct: 122 GLGSERQKATWQGRLESFDALGAFCLTEPDHGSDIAGGLATTATRDGDEWVIRGAKRWIG 181
Query: 208 NSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
T ADV +++AR+T +I G++V D PG TKI K+GLRI+QN DI L V +P
Sbjct: 182 AGTIADVALVWARDTADGEIKGFVVPTDTPGYEATKISGKMGLRIMQNADITLD-VRLPA 240
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ LPG +F T +L SR+ V WQ +G MGV D+ Y R+QFG PLAAFQ+ Q
Sbjct: 241 DAILPGATTFAATRALLRDSRMWVGWQGVGAQMGVLDVLRSYALRREQFGRPLAAFQLIQ 300
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
++ ++ GN+ A + ++ L ++G M HA++ K+ T AR + AL R+ LGGNG
Sbjct: 301 AQIAEVAGNLAASAGMMLQVDALRQEGRMEMMHAAMAKATSTRLARSSAALARDALGGNG 360
Query: 388 ILSDFLVAKVI 398
+L++ +AK++
Sbjct: 361 LLTEHEIAKIM 371
>gi|448622428|ref|ZP_21669122.1| acyl-CoA dehydrogenase [Haloferax denitrificans ATCC 35960]
gi|445754510|gb|EMA05915.1| acyl-CoA dehydrogenase [Haloferax denitrificans ATCC 35960]
Length = 387
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + LT EE+ VR + R +++++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLELEGDLTGEEKLVRDEARRFVDEQVKPDIGEHYEAGTFPTDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GS+EQKQ++LP L
Sbjct: 63 GYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GSD S + T A + ++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSDPSGMETRAERDADSYVLNGSKTWITNSPIADVAVVWARDVSAEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KIE+K+ +R G+I L V VP+ D LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIEDKLSMRASVTGEIGLDDVRVPEADVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARFGIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQITNAQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRHQQVSMAKRHNVRVAREVTRTAREMLGGNGITTDY 350
>gi|423068493|ref|ZP_17057281.1| hypothetical protein HMPREF9682_00502 [Streptococcus intermedius
F0395]
gi|355366748|gb|EHG14465.1| hypothetical protein HMPREF9682_00502 [Streptococcus intermedius
F0395]
Length = 402
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 199/356 (55%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYTVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFADV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G ++ +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFNAALKYATNRQQFKRPIAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ E G +++L K + RETVAL RE GG+GI + VA+
Sbjct: 314 IAYSVRIAEMQEAGNELMLNSALAKMHNSLVMRETVALARETCGGDGITLETDVAR 369
>gi|421490925|ref|ZP_15938292.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus SK1138]
gi|400371922|gb|EJP24871.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus SK1138]
Length = 402
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADDLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYAVAKGAQIMNDP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WI+ G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWIINGEKRWIGGSDTADVIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F+D
Sbjct: 194 DVADGKIKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFEDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G + +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I RL ++ E G +++L K + RETVAL RE+ GG+GI + VA+
Sbjct: 314 IAYSVRLAEMQEAGNELMLNSALAKMHNSLVMRETVALAREVGGGDGITLETDVAR 369
>gi|403525989|ref|YP_006660876.1| acyl-coenzyme A dehydrogenase/oxidase family protein [Arthrobacter
sp. Rue61a]
gi|403228416|gb|AFR27838.1| acyl-coenzyme A dehydrogenase/oxidase family protein [Arthrobacter
sp. Rue61a]
Length = 405
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 203/348 (58%), Gaps = 6/348 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y + LL++EE+ V ++R +E E P++AEYWE+ EFP + L L V
Sbjct: 17 ADWYDAEALLSTEERQVLGRLRAFLETEAKPLLAEYWERGEFPEQLARPLIDLDVMEPAD 76
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ P + I E+AR DAS +T+ + L I + SE+Q+++++P +
Sbjct: 77 LTFEAPARGIF-HGFRIFELARTDASLATWYTAQAGLFRTAIRVGASEDQQKEWMPKVID 135
Query: 166 LNTIACWALTEPAYGSD-ASALNTTA---TKVEGG-WILEGQKRWIGNSTFADVLVIFAR 220
+ ++LTEP +GSD A L+TTA ++GG W+L+G KRWIG ++ ADVL +FAR
Sbjct: 136 FSLKGVFSLTEPEHGSDIAGGLSTTARFEANLDGGTWVLDGAKRWIGGASTADVLCVFAR 195
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ Q+ +LV + A G+T+ KI K LR++QN I L V VP+ RL VNSF+D
Sbjct: 196 DVADGQVKSFLVDRTAAGVTLEKIHGKTSLRMMQNAHITLDNVRVPEAMRLHNVNSFKDV 255
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+ +L R VAW GI G ++ Y+KER+QFG L ++Q+ Q+KL +MLGNI A
Sbjct: 256 AAMLRAMRSDVAWIATGIQAGAFEAGLAYVKERQQFGRSLGSYQLVQEKLARMLGNITAS 315
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+ + RL + G ++L K + RETVAL RE++GGNGI
Sbjct: 316 LSLVVRLTEQQAWGIYRDQDSALAKMQTSLMMRETVALAREVVGGNGI 363
>gi|448417398|ref|ZP_21579334.1| glutaryl-CoA dehydrogenase [Halosarcina pallida JCM 14848]
gi|445677886|gb|ELZ30382.1| glutaryl-CoA dehydrogenase [Halosarcina pallida JCM 14848]
Length = 387
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 191/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT+EE+ +R + R +++EI P + +++E FP +IP++G L TI
Sbjct: 3 DYLGLEADLTTEERMIRDEARRFVDEEIRPDIGDHFEAGTFPTELIPEMGELGFYAPTID 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V +L M I GSEEQK+++LP+L
Sbjct: 63 GYGLPGVGDRAYGVLMQELEAGDSGLRSMASVQGALVMHPIHAFGSEEQKERWLPALGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ S + T A K ++L G K WI NS ADV V++ R+T+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSGMQTRAEKDGDEYVLNGSKTWITNSPIADVAVVWGRDTSAEE 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I +K+ +R GDI L V VP+ED LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNEIHDKLSMRASVTGDIGLDDVRVPEEDVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + ++ Y K R QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARYGISWGVVGAARDAFETALEYAKGRDQFGGPIARFQMQQDKLAEMATKITNGQLMA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G + S+ K ARE RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGELRNQQVSMAKRHNVRMAREVSRTAREMLGGNGITTDY 350
>gi|319939085|ref|ZP_08013449.1| glutaryl-coa dehydrogenase [Streptococcus anginosus 1_2_62CV]
gi|319812135|gb|EFW08401.1| glutaryl-coa dehydrogenase [Streptococcus anginosus 1_2_62CV]
Length = 402
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYTVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WI+ G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWIINGEKRWIGGSDTADVIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F+D
Sbjct: 194 DVADGKIKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFEDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G + +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I RL ++ E G +++L K + RETVAL RE+ GG+GI + VA+
Sbjct: 314 IAYSVRLAEMQEAGNELMLNSALAKMHNSLVMRETVALAREVGGGDGITLETDVAR 369
>gi|315222948|ref|ZP_07864827.1| acyl-CoA dehydrogenase protein [Streptococcus anginosus F0211]
gi|335030638|ref|ZP_08524123.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus SK52 = DSM 20563]
gi|418963572|ref|ZP_13515407.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|315187898|gb|EFU21634.1| acyl-CoA dehydrogenase protein [Streptococcus anginosus F0211]
gi|333771299|gb|EGL48250.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus SK52 = DSM 20563]
gi|383342896|gb|EID21096.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 402
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WI+ G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWIINGEKRWIGGSDTADVIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F+D
Sbjct: 194 DVADGKIKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFEDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G + +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I RL ++ E G +++L K + RETVAL RE+ GG+GI + VA+
Sbjct: 314 IAYSVRLAEMQEAGNELMLNSALAKMHNSLVMRETVALAREVGGGDGITLETDVAR 369
>gi|418964871|ref|ZP_13516659.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
constellatus subsp. constellatus SK53]
gi|383344272|gb|EID22441.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
constellatus subsp. constellatus SK53]
Length = 402
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYTVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S AD++ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADIIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F D
Sbjct: 194 DVADGKVKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFADV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G ++ +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFNAALKYATNRQQFKRPIAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I R+ ++ E G +++L K + RETVAL RE GG+GI + VA+
Sbjct: 314 IAYSVRIAEMQEAGNELMLNSALAKMHNSLVMRETVALARETCGGDGITLETDVAR 369
>gi|354609745|ref|ZP_09027701.1| Glutaryl-CoA dehydrogenase [Halobacterium sp. DL1]
gi|353194565|gb|EHB60067.1| Glutaryl-CoA dehydrogenase [Halobacterium sp. DL1]
Length = 390
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 195/351 (55%), Gaps = 5/351 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + LT+EE+ +R RE + + + P + E++ + FP +IP++G L +
Sbjct: 3 DYVGLEADLTAEERLIRDTAREFVAENVQPDVGEHFVEGTFPTELIPEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V +L M I GSEEQK+++LP+L
Sbjct: 63 GYGLPGVGEKAYGLLMQELEACDSGLRSMASVQGALVMYPIHAFGSEEQKERWLPALGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG----WILEGQKRWIGNSTFADVLVIFARNT 222
+ C+ LTEP +GS+ SA+ T A + G ++L G K WI NS +DV V++A++
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAERAGGHAGDEYVLNGSKTWITNSPISDVAVVWAKDA 182
Query: 223 TTN-QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ + + G+LV+ D G+T KI++K+ LR G+I L+ V VP E+RLPGV +
Sbjct: 183 SEDGTVRGFLVETDRDGVTTNKIDDKLSLRASITGEISLQNVRVPQENRLPGVEGMKGPL 242
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + ++ +Y +R+QFG P+ FQ+ QQKL +M I
Sbjct: 243 SCLTQARYGIAWGAVGAARDCFETARQYATDREQFGKPIGGFQMQQQKLAEMATQITTSQ 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 LLAHRLADLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 353
>gi|55378695|ref|YP_136545.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
gi|55231420|gb|AAV46839.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
Length = 387
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR R+ +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEGDLGEEERMVRDTARDFVENEVKPDVGQHWIDGTFPTDLITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+ +
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNAHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|343524904|ref|ZP_08761860.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343396776|gb|EGV09312.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 402
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ E+WEK +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEHWEKPDFPFEQFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+AR D S +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGSYKPSELYIAFLYLELARFDTSMATFYTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WI+ G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWIINGEKRWIGGSDTADVIPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I ++V+K APG V I++KI LR V+NG I + V VPD DRL +N F+D
Sbjct: 194 DVADGKIKCFIVRKGAPGYDVEVIQHKIALRCVRNGHITMTNVEVPDSDRLVNINGFEDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA +GI+ G + +Y R+QF P+A FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I RL ++ E G +++L K + RETVAL RE+ GG+GI + VA+
Sbjct: 314 IAYSVRLAEMQEAGNELMLNSALAKMHNSLVMRETVALAREVGGGDGITLETDVAR 369
>gi|258650302|ref|YP_003199458.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258553527|gb|ACV76469.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
44233]
Length = 399
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 197/355 (55%), Gaps = 4/355 (1%)
Query: 37 PASKFPPCA--SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
P PP A +DYY + ++ + R E +A + + W++ E+P H+ +
Sbjct: 7 PDHDSPPTALDTDYYAVFADVPEADRLFWKRARTFAEDTLAEV-NQAWDQGEYPLHLARR 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG L + + G G S A + EI+R D S T I V LA+ +IAL GS E
Sbjct: 66 LGELDLLTDGVVGPGLTPMSPLAAGLVNMEISRGDGSMGTVIAVQGGLALRSIALFGSAE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
Q+ ++L LA+ + +ALTEP +GSD+ AL TTA + GW++ G KRWIGN + DV
Sbjct: 126 QQARWLVPLARGEKLGAFALTEPTHGSDSVALETTAVRDGDGWVINGCKRWIGNGSVGDV 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++AR+ + G+LV++D PG I K LR + I L V VP + LPG
Sbjct: 186 TVVWARDEQ-GHVRGFLVEQDTPGYRGETIRGKASLRAIHQAHITLTDVRVPLDAVLPGT 244
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+SF+D S+VL +R+ VAW +G + V++ Y + R QFG PLA+FQ+ Q++L +ML
Sbjct: 245 HSFKDASRVLLATRLGVAWAALGHATAVFEAALTYSRTRIQFGKPLASFQLVQERLTRML 304
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
+ M L L L + G +TP A+L K T ARE A+ R++LGGNGIL
Sbjct: 305 ATLTTMQLTCRHLAALDQAGTLTPTQAALAKYTNTRGARELAAIARDMLGGNGIL 359
>gi|116672364|ref|YP_833297.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
FB24]
gi|116612473|gb|ABK05197.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
Length = 408
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 199/356 (55%), Gaps = 7/356 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA----- 101
DYY + LLT +E+ V ++R +++E P++A+YWE+ EFP + L L +
Sbjct: 20 DYYDAESLLTEDERRVLGRLRNFLDREAQPLLADYWERGEFPTQLAQPLIDLDLMEPAEL 79
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G + P + I E+AR DAS +T+ + L I + S EQ+ +++P
Sbjct: 80 TGALGAKSSPARGIY-QGFRIFELARADASLATWYTSQAGLFRTAIRVGASPEQQAEWMP 138
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
+ + ++LTEP GSD A L+TTA + W+L G KRWIG + ADVL +FAR
Sbjct: 139 KVVDFSLKGVFSLTEPDSGSDIAGGLSTTARREGDSWVLNGAKRWIGGAVSADVLAVFAR 198
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ Q+ +LV + A G+T+ KI K LR++QN I L V VP+ RL VNSF+D
Sbjct: 199 DQEDGQVKAFLVDRQAEGVTLEKIHGKTALRMMQNAHIRLDGVRVPESMRLHNVNSFKDV 258
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+ +L R VAW GI G ++ RY+ ER QFG L +FQ+ Q+KL +MLGN+ +
Sbjct: 259 AAMLRAMRSDVAWIATGIQAGAFEAALRYVTERTQFGRQLGSFQLVQEKLARMLGNVTSS 318
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + RL + +G ++L K + RETVAL RE++GGNGI + VA+
Sbjct: 319 LSLVVRLTEQQARGIYRDQDSALAKMQTSLLMRETVALAREVVGGNGITLETDVAR 374
>gi|76803447|ref|YP_327716.1| acyl-CoA dehydrogenase 8 [Natronomonas pharaonis DSM 2160]
gi|76559262|emb|CAI50870.1| acyl-CoA dehydrogenase [Natronomonas pharaonis DSM 2160]
Length = 387
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 190/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ ++ R+ +E +AP + ++W FP +IPK+G L ++
Sbjct: 3 DYLGLESDLDEEERLIQETARDFVEDNVAPDIGQHWIDGTFPTDLIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP+L Q
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPALGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ +A+ T A K ++L G K WI NS ADV V++AR+T+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPTAMETQAEKDGDEYVLNGSKTWITNSPIADVAVVWARDTSADD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP+ + LP V + L
Sbjct: 183 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEIGLQNVRVPETNVLPEVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + ++ Y +R+QFG P+ FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAIGAARDCFETAREYATDREQFGTPIGQFQLQQDKLAEMATQISLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGDMRPQHVSMSKRNNVRMARNQSRIAREMLGGNGITADY 350
>gi|448376948|ref|ZP_21559948.1| acyl-CoA dehydrogenase 1 [Halovivax asiaticus JCM 14624]
gi|445656684|gb|ELZ09518.1| acyl-CoA dehydrogenase 1 [Halovivax asiaticus JCM 14624]
Length = 387
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L +EE+ +R RE +++++ P +A+++E FP +IP+LG L ++
Sbjct: 3 DYVSLEADLDAEERMIRDTAREFVDEKVRPDIADHYEAGTFPTDLIPELGELGFFAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T I + E+ D+ + V SL M I GSE QK ++L +
Sbjct: 63 GYGLPNVSETAYGILMQELEACDSGVRSMASVQGSLVMYPIHAYGSEAQKDEWLRDMGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GS+ S + T A K G+++ G K WI N+ ADV +I+AR+ + +
Sbjct: 123 EAIGCFGLTEPEHGSNPSGMETAAEKDADGYLINGSKTWITNAPIADVAIIWARDRSADD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G + K+++K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 EPVRGFLVETDRDGFSTNKLDDKLSLRASITGEIGLNDVRVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER QF P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDAFEQARDYALERDQFDGPIARFQLQQEKLAEMATQITTAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDLRPQHVSMAKRNNVRMARDQTRVAREMLGGNGITTDY 350
>gi|448394308|ref|ZP_21568113.1| acyl-CoA dehydrogenase [Haloterrigena salina JCM 13891]
gi|445662350|gb|ELZ15118.1| acyl-CoA dehydrogenase [Haloterrigena salina JCM 13891]
Length = 387
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + L EE+ +R RE + + + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVDLEADLGQEERMIRDTAREFVTEHVKPDIGDHFENGTFPKEIIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP+L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPALGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ T A G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAEWDGDGYVLTGSKTWITNSPIADVAVVWARDRSDPD 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI K+ LR G+I L V+VP+E+ LPGV+ + L
Sbjct: 183 TPVRGFLVETDRDGVSTNKITEKLSLRASITGEIGLNDVYVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y +R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYATDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGEMRPQHVSMAKRNNVRTARDQARIAREMLGGNGITTDY 350
>gi|344212737|ref|YP_004797057.1| glutaryl-CoA dehydrogenase [Haloarcula hispanica ATCC 33960]
gi|343784092|gb|AEM58069.1| glutaryl-CoA dehydrogenase [Haloarcula hispanica ATCC 33960]
Length = 387
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR R+ +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEGDLGEEERMVRDTARDFVENEVKPDVGQHWIDGTFPTDLITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+ +
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLSDLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|313885746|ref|ZP_07819495.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619111|gb|EFR30551.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
coleocola ACS-139-V-Col8]
Length = 401
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 196/358 (54%), Gaps = 9/358 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D Y + LT +E A+ +R +E + PI+ + +E AE P I LGA A
Sbjct: 13 EDVYGYSSALTEKEVAILQNLRHELETRVRPILIDSYENAELPREEI--LGAFAAARIMD 70
Query: 106 KGYGCPGHSVTGAAIAI------AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G A I E+AR D S +TF VH L TI + GSEEQK+KY
Sbjct: 71 HPDLFEGREDKWKAREIYNTFLYLELARFDPSVATFYTVHGGLGYNTILIGGSEEQKEKY 130
Query: 160 LPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
+ + C+ALTEP +GSD A L TTA G W+L G+KRWIG + AD + +F
Sbjct: 131 ATKVRTMTGQTCFALTEPDHGSDIAGGLATTAEFKNGEWVLNGEKRWIGGAKTADFIPVF 190
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+ N+I ++V K + GL+V +E+KI LRIV NG I LK V V DEDRL +N F
Sbjct: 191 ARDVADNKIKCFMVAKGSEGLSVENVEHKIALRIVNNGHITLKDVKVKDEDRLVNINGFG 250
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
D +K+ +RV VA +G + G ++ R +R+QF +A+FQ+ Q+KL M N+
Sbjct: 251 DVAKIFVFTRVDVAHIAMGTAAGAFNAALRLTTDREQFERKIASFQLVQEKLATMQANVA 310
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
A I R+ +L E+G ++SL K R RETVAL RE+ GGNGI + VA+
Sbjct: 311 ACIAYSARVAELQEEGTAKMFNSSLAKLHNAKRMRETVALAREVCGGNGITYETEVAR 368
>gi|220913502|ref|YP_002488811.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|219860380|gb|ACL40722.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
chlorophenolicus A6]
Length = 396
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 195/355 (54%), Gaps = 12/355 (3%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
ASD D LL+ EE A+R KVR+ + I +A ++E FP + P+LG L V G
Sbjct: 10 ASDILDLDALLSGEELALRQKVRDFTVQRIKSDIARWYEDGVFPVELAPELGELGVLGMH 69
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGCPG + +A E+ D+ TF+ V SLAM I GSEEQKQ++LP +A
Sbjct: 70 LEGYGCPGRTAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHTWGSEEQKQEWLPRMA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATK----VEGGWILEGQKRWIGNSTFADVLVIFAR 220
I C+ALTEP GSD S++ TTAT+ GW+L G KRWIG ++ A V+V++A
Sbjct: 130 AGEVIGCFALTEPTAGSDPSSMATTATRDGSGDNAGWVLNGAKRWIGLASVAGVIVVWA- 188
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + + G+LV PG+T T I K+ +R DI V + E LPG +
Sbjct: 189 -MTDDGVRGFLVPAGTPGVTATPIGQKLSMRASIQCDIAFDGVRLGPEALLPGAFGLRGP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + Y+ Y ++R QFG PLA +Q+ Q+KLV ML IQ
Sbjct: 248 FTCLNEARYGIAWGAMGAARDSYEAALAYSQDRLQFGKPLAGYQLTQEKLVNMLVEIQKG 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L+ L +L + G + P SLGK RE + + RE +LGGNGI D+
Sbjct: 308 TLLALHLGRLKDAGTIRPEQISLGK---LNNVREAIKIAREARTILGGNGITLDY 359
>gi|108804702|ref|YP_644639.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108765945|gb|ABG04827.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 386
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 200/351 (56%), Gaps = 7/351 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
++ + D LL+ EE+AVR +VR +E+ + P + ++E+A FP ++P++GAL + G +
Sbjct: 2 ENFLELDTLLSEEERAVRDRVRSFVEERVRPNIKGWYEEARFPRELVPEMGALGLLGMHL 61
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S +A E+ D+ TF+ V SLAM I GSEEQKQ++LP +A+
Sbjct: 62 EGYGCAGRSAVEYGLACMELEAGDSGIRTFVSVQGSLAMSAIHRFGSEEQKQEWLPRMAR 121
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTTT 224
+ C+ LTEP GSD +++ T A + GW++EG KRWIG ++ A+V VI+AR +
Sbjct: 122 GEAVGCFGLTEPTAGSDPASMKTFARRDGDGWVIEGAKRWIGMASIAEVAVIWARTDEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV A G + T IE K+ +R DI L V VP LPG + L
Sbjct: 182 NPVRGFLVPTAAQGFSATNIEPKLSMRASIQCDIELGGVRVPAGAMLPGAAGLRAPFSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + Y+ Y R+QFG P+A+FQ+ Q+KL M+ IQ +L+
Sbjct: 242 NEARYGIIWGSMGAARDCYECALEYSLRREQFGRPVASFQLTQKKLADMVVEIQKGMLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L ++ + GA+ SLGK RE + + RE +LGGNG+ D+
Sbjct: 302 LHLGRMKDAGALKHQQISLGK---LNNVREAIKIAREARAILGGNGVTLDY 349
>gi|433639486|ref|YP_007285246.1| acyl-CoA dehydrogenase [Halovivax ruber XH-70]
gi|433291290|gb|AGB17113.1| acyl-CoA dehydrogenase [Halovivax ruber XH-70]
Length = 387
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L +EE+ +R RE +++++ P +A+++E FP +IP+LG L ++
Sbjct: 3 DYVSLEADLDAEERMIRDTAREFVDEKVRPDIADHYEAGTFPTDLIPELGELGFFAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V SL M I GSE QK ++L +
Sbjct: 63 GYGLPNVSETAYGLLMQELEACDSGVRSMASVQGSLVMYPIHAYGSEAQKDEWLRDMGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GS+ S + T A K G+++ G K WI N+ ADV +I+AR+ + +
Sbjct: 123 EAIGCFGLTEPEHGSNPSGMETAAEKDADGYVINGSKTWITNAPIADVAIIWARDRSADD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G + K+++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 EPVRGFLVETDRDGFSTNKLDDKLSLRASITGEIGLNDVRVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER QF P+A FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDAFEQAREYALERDQFDGPIARFQLQQEKLAEMATQITTAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 YRLAELKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|322385545|ref|ZP_08059189.1| acyl-CoA oxidase [Streptococcus cristatus ATCC 51100]
gi|417921069|ref|ZP_12564564.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
cristatus ATCC 51100]
gi|321270283|gb|EFX53199.1| acyl-CoA oxidase [Streptococcus cristatus ATCC 51100]
gi|342834989|gb|EGU69247.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
cristatus ATCC 51100]
Length = 402
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 197/356 (55%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWE +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEYWEAPDFPFEEFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+ R DAS +TF VH L T+ L G E Q++++LP
Sbjct: 74 KLFEGREGNYKPSELYIAFLYLELGRFDASIATFFTVHGGLCYNTVLLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +K LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVEDGKVKCFIVRKGAPGYHAEPIPHKTALRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA I+ G Y +Y K+R+QF P+AAFQI Q+KL +M N A+
Sbjct: 254 ARILTFTRADVAHIATAITCGSYVAALKYAKDRQQFKRPIAAFQIVQEKLARMQANAVAV 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ E G +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 LSYSARIAEMQEAGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|322368089|ref|ZP_08042658.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
gi|320552105|gb|EFW93750.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
Length = 387
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 188/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR RE +E+ + P + +++E FP +IP++G L +
Sbjct: 3 DYVDLEADLGQEERMVRDTAREFVEEHVKPDIGDHYEAGTFPEEIIPEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP L +
Sbjct: 63 GYGLPNLSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKERWLPDLGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ S + T A K ++L G K WI NS +DV V++AR+ +
Sbjct: 123 KAVGCFGLTEPEHGSNPSGMETYAEKEGDEYVLNGSKTWITNSPISDVAVVWARDRSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I +K+ LR G+I L+ V VP++ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNQIHDKLSLRASITGEISLQNVTVPEDAVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y ER QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFETARDYATERDQFGGPIARFQLQQDKLAEMATQITTSQLLV 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|239916843|ref|YP_002956401.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|281414696|ref|ZP_06246438.1| glutaryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239838050|gb|ACS29847.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 402
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 204/370 (55%), Gaps = 15/370 (4%)
Query: 35 ATPASKFPPCAS--DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
A+ A PP D + D L E+A + + ++ + P + YW+ EF F ++
Sbjct: 11 ASGAPAVPPGLPHVDLLRLRDRLEPVERARLDAIEDHLQTRVRPHLTRYWDAEEFAFDLL 70
Query: 93 PKLGALRVAGGTIKGYG---CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
P L L G G G S + AEIARVD S S + +H+ L + IA
Sbjct: 71 PGLAEL--------GLGRLVLDGSSSLFQQLVHAEIARVDLSLSALVGIHNELNLGMIAG 122
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGN 208
GSE QK + L + + + LTEP +GSD A L TTAT+ W++ G KRWIG
Sbjct: 123 LGSERQKATWQGRLESFDALGAFCLTEPDHGSDIAGGLATTATRDGDEWVIRGAKRWIGA 182
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
T ADV +++AR+T +I G++V D PG TKI K+GLRI+QN DI L V +P +
Sbjct: 183 GTIADVALVWARDTADGEIKGFVVPTDTPGYEATKISGKMGLRIMQNADITLD-VRLPAD 241
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
LPG +F T +L SR+ V WQ +G MGV D+ Y R+QFG PLAAFQ+ Q
Sbjct: 242 AILPGATTFAATRALLRDSRMWVGWQGVGAQMGVLDVLRSYALRREQFGRPLAAFQLIQA 301
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
++ ++ GN+ A + ++ L ++G M HA++ K+ T AR + AL R+ LGGNG+
Sbjct: 302 QIAEVAGNLAASAGMMLQVDALRQEGRMEMMHAAMAKATSTRLARSSAALARDALGGNGL 361
Query: 389 LSDFLVAKVI 398
L++ +AK++
Sbjct: 362 LTEHEIAKIM 371
>gi|448626583|ref|ZP_21671362.1| glutaryl-CoA dehydrogenase [Haloarcula vallismortis ATCC 29715]
gi|445760195|gb|EMA11459.1| glutaryl-CoA dehydrogenase [Haloarcula vallismortis ATCC 29715]
Length = 387
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR R+ +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLESDLGEEERMVRDTARDFVENEVKPDVGQHWIDGTFPTDLITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+ +
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I ++ VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISVQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|300712591|ref|YP_003738404.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448294218|ref|ZP_21484301.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299126275|gb|ADJ16613.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445587023|gb|ELY41290.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 387
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 201/348 (57%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + + L+ EE+ VR + R+ +E+E+ PI+A+++ + FP +I +LG L ++
Sbjct: 3 DFVELEQDLSQEERTVRDEARKFVEEEVRPIIADHYLEGTFPTELISRLGDLGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG S T + + E+ D+ + V +L M I GSEEQK+++LPS+ +
Sbjct: 63 GYGLSNVSETAYGLLMQELEAGDSGVRSMASVQGALVMYPIYAFGSEEQKKRWLPSMGKG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ I +ALTEP +GSDA ++ T A + ++L G+KRW NS ADVLV++AR+T++
Sbjct: 123 DAIGGFALTEPEHGSDAGSMETQAERDGEEFVLNGEKRWCTNSPIADVLVVWARDTSSEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D GL + I+ K+ LR +G+ + V +P E+ LPGV+ + L
Sbjct: 183 EPVRGFLVETDRDGLDIDTIDGKLSLRASSSGEFTMDGVRIPKENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARTYATDREQFGKPIGGFQLQQEKLAEMATQITTSQLLV 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + P H S+ K AR+ + RE+LGGNGI +++
Sbjct: 303 HRLAELKERGELRPQHVSMAKRNNVEMARDQSRIAREMLGGNGITAEY 350
>gi|448665433|ref|ZP_21684708.1| glutaryl-CoA dehydrogenase [Haloarcula amylolytica JCM 13557]
gi|445773114|gb|EMA24148.1| glutaryl-CoA dehydrogenase [Haloarcula amylolytica JCM 13557]
Length = 387
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ VR R+ +E E+ P + ++W FP +I ++G L +
Sbjct: 3 DYLGLEGDLGEEERMVRDTARDFVENEVKPDVGQHWIDGTFPTDLITEMGDLGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP+L
Sbjct: 63 GYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHAYGSDAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ TTA + G++L G K WI N+ +D+ V++A+ T+ +
Sbjct: 123 ERVGCFGLTEPEHGSNPSAMETTAERDADGYVLNGSKTWITNAPISDLAVVWAKVTSADG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDEKLSLRASITGEIGLQNARVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M ++ H Y +R+QFG P+A +Q+ Q+KL +M I L+
Sbjct: 243 TQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 HRLADLKERGDLRPEQVSMAKRNNARMAREQSRVAREMLGGNGITADY 350
>gi|255036399|ref|YP_003087020.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254949155|gb|ACT93855.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
18053]
Length = 387
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 195/355 (54%), Gaps = 2/355 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D++ DLLT E++ +R VR+ ++EI P++ + +KAEFP ++IPK G L V G TI
Sbjct: 4 TDFFNISDLLTEEQRLIRQAVRDFTDREIKPVIEDLAQKAEFPQYLIPKFGELGVFGPTI 63
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + EI R D+ + + V SSL M I GSEEQK+KYLP LA
Sbjct: 64 PAEYGGGGLDYTSYGLMCQEIERGDSGMRSTVSVQSSLVMWPIFAFGSEEQKRKYLPKLA 123
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GS+ + T K +GG++L G K WI N+ FA + V++ARN
Sbjct: 124 TGEWLGCFGLTEPDHGSNPGGMQTNIVKTDGGYLLNGSKMWISNAPFAQIGVVWARNEE- 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G +V++ GL+ +I NK LR G+++ V +P+ LPG + + L
Sbjct: 183 GRVQGVIVERGMEGLSTPEIHNKWSLRTSATGELVFDNVLIPETHILPGALGLKAALQCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG ++ YD +Y ER QF P+ AFQ+ Q+KL +ML I L+
Sbjct: 243 DKARYGIAWGAIGAAVDCYDTAVKYSAERIQFDKPIGAFQLTQKKLAEMLTEITKAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL +L + G T S+ K A R++LG GI +F + + +M
Sbjct: 303 WRLGQLMDAGEATTVQISMAKRNNVEMALNVAREARQVLGAMGITGEFPIMRHMM 357
>gi|328957925|ref|YP_004375311.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
gi|328674249|gb|AEB30295.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
Length = 420
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 202/355 (56%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +F + LT E V +VR+ + + + P++ +YW++ EFP + +
Sbjct: 33 EDILKFSESLTDGEIVVLQRVRKAVNEHLKPVINDYWKRGEFPTEEFKHVAKTGLINDPA 92
Query: 106 KGYGCPGHSV---TGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
P + T ++ + DAS +TF VH+ L + L GS EQ+ ++LP
Sbjct: 93 LFENQPNQFMWRNTYFLFLAYDLYKFDASIATFFGVHAGLGYFSFLLGGSPEQQMRWLPK 152
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
L C+ALTEP +GSD A+ L TTA + WI+ G+KRWIG ++ AD++ ++AR+
Sbjct: 153 LQNFELQTCFALTEPEHGSDTAAGLATTARREGDKWIINGEKRWIGGASSADLIPVYARD 212
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N++ ++V+K GL+V I++KI LRIVQNG+I L V V + +RL +N F+D +
Sbjct: 213 VEDNKVKCFIVEKGQKGLSVDDIDDKIALRIVQNGNIHLDNVEVVESNRLQNINGFKDVA 272
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVL +R VA+ G+ G + Y R QFG P+A+FQ+ Q+KL +M GN +
Sbjct: 273 KVLYATRAGVAYAGAGMMAGSLEAALEYTTNRVQFGKPIASFQLVQEKLARMQGNAVNAL 332
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ RL +L E+G + +ASL K + R RETVALGRE+ GGNGI + VA+
Sbjct: 333 ALSARLAELQERGEFSEINASLAKMNNSLRLRETVALGREVCGGNGITLERNVAR 387
>gi|448485127|ref|ZP_21606462.1| acyl-CoA dehydrogenase domain protein [Halorubrum arcis JCM 13916]
gi|445818629|gb|EMA68482.1| acyl-CoA dehydrogenase domain protein [Halorubrum arcis JCM 13916]
Length = 386
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 191/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ P M ++W + FP +IPK+G + ++
Sbjct: 3 DYFDMESTLSEEERLLVDSARSFVDSEV-PDMGDHWIEGTFPTELIPKMGEMGFYAPNLE 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 62 GYGLPGVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDEQKEEWLPRLGTG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTT 224
+ + C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++
Sbjct: 122 DAVGCFGLTEPEHGSNPSAMETMAEPDGDEYVLNGSKTWITNSPIADVAVVWAKDHGEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+RLPGV + L
Sbjct: 182 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNVRVPAENRLPGVEGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + +++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 242 TQARYGIAWGAVGAARDCFEVAREYATDREQFGKPIGGFQMQQEKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|323359839|ref|YP_004226235.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
gi|323276210|dbj|BAJ76355.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
Length = 389
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 189/346 (54%), Gaps = 2/346 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D FDD+LT++E+ R +VR +E+ + P +A+++++A FP +IP L L + G +
Sbjct: 4 DLLDFDDMLTADERDTRDRVRAFVEERVRPFIADWYDRAYFPAELIPGLADLGLFGMHLT 63
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ D+ T + V SLAM I L GSEEQKQ +LP +A+
Sbjct: 64 GYGCAGRSAVEYGLAAMELEAGDSGLRTLVSVQGSLAMSAIYLHGSEEQKQTWLPRMARG 123
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP GSD +++ T A + W+L+G KRWIG ++ ADV VI+AR T
Sbjct: 124 EVIGCFGLTEPGSGSDPASMTTRARQDGDAWVLDGAKRWIGLASIADVAVIWAR--TDEG 181
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+LV PG T I K+ +R DI L V VP + LP L
Sbjct: 182 VRGFLVPTGTPGFVATPIAPKMSMRASIQCDITLTDVRVPLDAVLPLARGLSAPFACLNN 241
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + W IG + Y Y ER+QFG P+AAFQ+ QQKLV M I+ LV R
Sbjct: 242 ARYGIGWGVIGAARDSYATALAYAGERRQFGQPIAAFQLTQQKLVDMAIEIEKAQLVALR 301
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L +L + G + S+ K T A + V R +LGGNG+ ++F
Sbjct: 302 LGRLKDAGRLQSHQISVAKLANTRAAIDVVREARTILGGNGVTAEF 347
>gi|269955031|ref|YP_003324820.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269303712|gb|ACZ29262.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
DSM 15894]
Length = 414
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/361 (37%), Positives = 209/361 (57%), Gaps = 7/361 (1%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P DY +T E+A ++ VRE ++ + P++ YWE+AE PF ++ +LGA
Sbjct: 21 PLDLDYVGAFADVTPAERAHQLAVREFVQDRVLPVIDGYWERAEVPFELVKELGARDFLR 80
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ P S+T +A E++R D S +T V LA+ +I + GS+ Q +Y
Sbjct: 81 DGVSVPDRPEISLTAEGLAAMEMSRGDGSVATVCGVQGGLALRSIMMHGSDAQIARYAEP 140
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKV--EG--GWILEGQKRWIGNSTFADVLVIF 218
+A+ + + +ALTEP +GSD+ +L TTA + +G G+ + G+K+WIG + + V++
Sbjct: 141 MARGDVLGAFALTEPTHGSDSVSLETTAVRTVRDGVEGYAINGEKKWIGFGSCGHITVVW 200
Query: 219 AR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
AR + +Q++G++V +DA G T IE K+ LR + I+L VFVP + LPG
Sbjct: 201 ARLVGDAGDSQVHGFIVPQDADGYRATTIEGKVALRAITQAHIVLDDVFVPLDAALPGAT 260
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
SF+ TS+VL +R+ VAW +G ++ Y+ Y+ +R QFG PLAA Q+ Q++L +ML
Sbjct: 261 SFKATSQVLFATRLAVAWSAVGHAIACYEAALEYVGQRVQFGRPLAASQLVQERLTRMLS 320
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
I + L+ RL ++ E G +T ASL K T ARE AL R++LGGNGIL VA
Sbjct: 321 TISQLQLLVARLTRVAEAGGLTGAQASLAKYSCTRGAREVAALARDMLGGNGILLANRVA 380
Query: 396 K 396
+
Sbjct: 381 R 381
>gi|335029749|ref|ZP_08523254.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
infantis SK1076]
gi|417938803|ref|ZP_12582097.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
infantis SK970]
gi|334268273|gb|EGL86715.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
infantis SK1076]
gi|343390818|gb|EGV03397.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptococcus
infantis SK970]
Length = 402
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 197/356 (55%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF---HVIPKLGALRVAG 102
D + + D LT E V + R +EK + P++ EYWE +FPF + + K +
Sbjct: 14 EDLFHYADGLTLGEAEVLQETRRLIEKHLRPVINEYWEAPDFPFEQFYAVAKGAQIMNNP 73
Query: 103 GTIKGY-GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
+G G S A E+ R DAS +TF VH L TI L G E Q++++LP
Sbjct: 74 KLFEGREGNYKPSELYIAFLYLELGRFDASMATFFTVHGGLCYNTILLGGDERQQKEFLP 133
Query: 162 SLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
LA + C+ALTEP GSD A L TTA +V WIL G+KRWIG S ADV+ +FAR
Sbjct: 134 KLAAFDWQGCFALTEPLSGSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFAR 193
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ ++ ++V+K APG I +K+ LR V+NG I +K V VPD DRL +N F D
Sbjct: 194 DVEDGRVKCFIVRKGAPGYHAEPIPHKVSLRCVRNGHITMKNVEVPDSDRLVNINGFGDV 253
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+++L +R VA I+ G + +Y K+R+QF P+A+FQI Q+KL +M N A
Sbjct: 254 ARILTFTRADVAHIATAITCGSFVAALKYAKDRQQFKRPIASFQIVQEKLARMQANAVAA 313
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ E G +++L K + RETVAL RE GGNGI + VA+
Sbjct: 314 LAYSARIAEMQEAGNELMLNSALAKMHNSLVMRETVALARETCGGNGITLETDVAR 369
>gi|448425688|ref|ZP_21582944.1| acyl-CoA dehydrogenase domain protein [Halorubrum terrestre JCM
10247]
gi|448452974|ref|ZP_21593574.1| acyl-CoA dehydrogenase domain protein [Halorubrum litoreum JCM
13561]
gi|445680313|gb|ELZ32761.1| acyl-CoA dehydrogenase domain protein [Halorubrum terrestre JCM
10247]
gi|445808061|gb|EMA58136.1| acyl-CoA dehydrogenase domain protein [Halorubrum litoreum JCM
13561]
Length = 386
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 191/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ P M ++W + FP +IPK+G + ++
Sbjct: 3 DYFDMESTLSEEERLLVDSARSFVDGEV-PDMGDHWIEGTFPTELIPKMGEMGFYAPNLE 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 62 GYGLPGVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDEQKEEWLPRLGTG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTT 224
+ + C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++
Sbjct: 122 DAVGCFGLTEPEHGSNPSAMETMAEPDGDEYVLNGSKTWITNSPIADVAVVWAKDHGEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+RLPGV + L
Sbjct: 182 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNVRVPAENRLPGVEGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + +++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 242 TQARYGIAWGAVGAARDCFEVAREYATDREQFGKPIGGFQMQQEKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|399576022|ref|ZP_10769779.1| acyl-CoA dehydrogenase 1 [Halogranum salarium B-1]
gi|399238733|gb|EJN59660.1| acyl-CoA dehydrogenase 1 [Halogranum salarium B-1]
Length = 400
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + L +EE+ +R RE +E+E+ P + E++ + FP +I K+G L +
Sbjct: 16 DYVELEADLDAEERMIRDTAREFVEEEVRPDIGEHYLEGTFPTDLISKMGELGFYAPNLD 75
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GS++QK ++LP L
Sbjct: 76 GYGLPDVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAFGSDDQKDEWLPKLGAG 135
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GSD S++ T A + ++L G K WI NS ADV V++AR+T+ +
Sbjct: 136 EAVGCFGLTEPEHGSDPSSMETRAERDGDEYVLNGSKTWITNSPIADVAVVWARDTSAEE 195
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ +I K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 196 TPVRGFLVETDRDGVSTNEIHEKLSLRASITGEIGLNDVRVPEENVLPGVEGMKGPLSCL 255
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QFG P+A FQ+ Q+KL +M I L+
Sbjct: 256 TQARFGIAWGAVGAARNCFETAREYATDREQFGGPIARFQLQQEKLAEMATQITTAQLLA 315
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L E+G + P S+ K AR+ + RE+LGGNGI D+
Sbjct: 316 YRLAELKERGDLRPQQVSMAKRNNVRMARDQARVAREILGGNGITVDY 363
>gi|399038142|ref|ZP_10734527.1| acyl-CoA dehydrogenase, partial [Rhizobium sp. CF122]
gi|398064020|gb|EJL55720.1| acyl-CoA dehydrogenase, partial [Rhizobium sp. CF122]
Length = 273
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVI 217
+LP +A+ TI C+ LTEP GS S TT K EG W+L GQKRWIGN+T+ DV +I
Sbjct: 1 WLPPMARWETIGCFGLTEPLVGSGTSGGLTTTAKREGDTWVLNGQKRWIGNATWCDVSII 60
Query: 218 FARNTTTNQINGYLVK-KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
+AR+ NQ+ G++V+ K PG +V KIENKI L++VQNG I L V VP+ +RL G NS
Sbjct: 61 WARDLADNQVKGFIVENKTTPGFSVEKIENKIALKVVQNGVITLNDVRVPEANRLQGGNS 120
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
F+DT++VL ++R MV W G+ MG ++ +Y +ER QFG P+A+FQ+ Q L +ML N
Sbjct: 121 FRDTARVLRMTRYMVGWAATGVQMGAFEATLKYTQERLQFGKPIASFQMVQDLLAKMLAN 180
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ A + RL ++ ++G + HASL K++ TA++RETVA GRELLGGNGI++D+ +A+
Sbjct: 181 VTACQCLMVRLAQMDDEGKLADHHASLAKAFCTAKSRETVAWGRELLGGNGIVADYNLAR 240
Query: 397 VIM---LFFLHLDHFVCKNLIVS 416
+ + + +NLIV
Sbjct: 241 FFADAEALYSYEGTYQMQNLIVG 263
>gi|119961259|ref|YP_946753.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
gi|119948118|gb|ABM07029.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
Length = 408
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 199/349 (57%), Gaps = 7/349 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+Y + LL++EE+ V ++R +E E ++AEYWE+ EFP + L L V
Sbjct: 19 ADWYDAEALLSTEERQVLGRLRTFLETEAKHLLAEYWERGEFPEQLARPLIDLDVMEPAD 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
P + I E+AR DAS +T+ + L I + SE+Q+++++P +
Sbjct: 79 LTLEAPARGIF-HGFRIFELARTDASLATWYTAQAGLFRTAIRVGASEDQQKEWMPKVID 137
Query: 166 LNTIACWALTEPAYGSD-ASALNTTATKVE-----GGWILEGQKRWIGNSTFADVLVIFA 219
+ ++LTEP +GSD A L+TT + E G W+L+G KRWIG ++ ADVL +FA
Sbjct: 138 FSLKGVFSLTEPEHGSDIAGGLSTTTARFEANLDGGTWVLDGAKRWIGGASTADVLCVFA 197
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R+ Q+ +LV + A G+T+ KI K LR++QN I L V VP+ RL VNSF+D
Sbjct: 198 RDVADGQVKAFLVDRTAAGVTLEKIHGKTSLRMMQNAHITLDNVRVPEAMRLHNVNSFKD 257
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+ +L R VAW GI G ++ Y+KER+QFG L ++Q+ Q+KL +MLGNI A
Sbjct: 258 VAAMLRAMRSDVAWIATGIQAGAFEAALAYVKERQQFGRSLGSYQLVQEKLARMLGNITA 317
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+ + RL + G ++L K + RETVAL RE++GGNGI
Sbjct: 318 SLSLVVRLTEQQAWGIYRDQDSALAKMQTSLMMRETVALAREVVGGNGI 366
>gi|260903973|ref|ZP_05912295.1| acyl-CoA dehydrogenase domain protein [Brevibacterium linens BL2]
Length = 398
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 195/351 (55%), Gaps = 9/351 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + LL+ E +R KVR +++ P +A+++E A FP ++ ++G L + G +
Sbjct: 16 SDLLNLEGLLSEVEIQLRDKVRAFVDERFRPSIADWYENAHFPVEIVREMGDLGLLGMHL 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGCPG S +A E+ D+ TF+ V SLAM I GSEEQK +YLP +A+
Sbjct: 76 HGYGCPGRSAVEYGLAAMELEAGDSGLRTFVSVQGSLAMSAIHKFGSEEQKNRYLPGMAK 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD ++ TTAT+ +G W L G KRWIG ++ AD+ VI+A T
Sbjct: 136 GEIIGCFGLTEPTAGSDPGSMATTATRNDDGSWTLNGAKRWIGLASIADIAVIWA--ATD 193
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G+LV D G T T IE K+ +R DI + V +P E LP V + L
Sbjct: 194 EGIRGFLVPTDTAGFTATPIEQKLSMRASIQCDIDIVDVQLPAEAVLPEVRGLKGPFSCL 253
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + Y++ +Y +ER QF PL+ +QI QQKLV M+ IQ ILV
Sbjct: 254 NEARYGIMWGAMGAARDSYEVALKYAQERMQFDKPLSGYQITQQKLVNMVLEIQKGILVA 313
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
+ +L + G + P S+GK RE +A+ RE +LGGNGI ++
Sbjct: 314 LQTGRLKDAGTLDPVQISVGK---LNNCREAIAICREARTMLGGNGITLEY 361
>gi|448313124|ref|ZP_21502850.1| acyl-CoA dehydrogenase [Natronolimnobius innermongolicus JCM 12255]
gi|445599201|gb|ELY53239.1| acyl-CoA dehydrogenase [Natronolimnobius innermongolicus JCM 12255]
Length = 387
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + LT EE+ +R RE +++ + P + +++E FP +IP++G + ++
Sbjct: 3 DFLDLESELTDEERLIRDTAREFVDERVRPDIGDHFENGTFPTELIPEMGDMGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK ++LP L
Sbjct: 63 GYGSPNVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAYGSEEQKTEWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A + G+++ G K WI NS +DV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAEEDGDGYVINGSKTWITNSPISDVAVVWARDQSDPD 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 APVRGFLVETDRDGVTTNKISEKLSLRASITGEIGLNGVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLV 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L +G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 SRLTELKARGELRPQHVSMAKRNNVRMARDQSRIAREMLGGNGITTDY 350
>gi|359779006|ref|ZP_09282250.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
gi|359303718|dbj|GAB16079.1| putative glutaryl-CoA dehydrogenase [Arthrobacter globiformis NBRC
12137]
Length = 386
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 192/349 (55%), Gaps = 8/349 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD FD LLT++E ++R VR ++ EI P +A ++EKA FP ++P+L L + G +
Sbjct: 5 SDLIDFDSLLTADEISLRDSVRSFVDSEIKPNIAGWYEKAVFPLEIVPQLAKLGLLGMHL 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGC G S +A AE+ D+ TF+ V SLAM I GSE+QK ++LP++A+
Sbjct: 65 KGYGCAGRSAVDYGLAGAELEAGDSGLRTFVSVQGSLAMSAIYKHGSEDQKLEWLPAMAR 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD S++ T A + G W+L G KRWIG ++ A V VI+A+ T
Sbjct: 125 GEAIGCFGLTEPTAGSDPSSMTTFARRDGGDWVLNGAKRWIGLASVAQVAVIWAQ--TDE 182
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V PG T T IE K+ +R DI L V +P+ LP V + L
Sbjct: 183 GIRGFVVPTSTPGFTATPIEPKLSMRASIQCDIELTDVRLPESAVLPNVVGLKGPFSCLN 242
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + ++ Y K R QF PLA +Q+ QQKLV M I L+
Sbjct: 243 EARYGIVWGAMGAARDAFEAALDYSKGRMQFEKPLAGYQLTQQKLVDMALEINKGFLLAL 302
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSD 391
L + + G + P H S+GK RE + + RE +LGGNGI D
Sbjct: 303 HLGRKKDAGTLLPDHISVGK---LNNCREAIKIAREARTILGGNGITLD 348
>gi|374372898|ref|ZP_09630559.1| Glutaryl-CoA dehydrogenase [Niabella soli DSM 19437]
gi|373234974|gb|EHP54766.1| Glutaryl-CoA dehydrogenase [Niabella soli DSM 19437]
Length = 394
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 193/356 (54%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DY++ D L T E + +R VR ++KEI+PI+ Y ++A FP ++ +LGAL G T
Sbjct: 10 SPDYFEVDALFTEEHRMIRDAVRAYVKKEISPIIERYAQEAAFPEQIVKQLGALGCFGPT 69
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + E+ R D+ + V SL M I G+E QKQKYLP L
Sbjct: 70 IPTQYGGGGLDYISYGLMMQELERGDSGVRSTASVQGSLVMYPIYAFGNEAQKQKYLPKL 129
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GSD S++NT T IL G K WI N+ FA V V++A++
Sbjct: 130 AGGEWLGCFGLTEPDHGSDPSSMNTHFTDAGDHVILNGAKMWISNAPFAQVAVVWAKDEA 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G +V++ PG + NK LR G+++ V VP E+ LPGV +
Sbjct: 190 -GIVQGLIVERGMPGFSTPTTHNKWSLRASATGELVFDNVRVPKENILPGVKGMKGPLSC 248
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 249 LNKARFGIAWGVIGAAMDCYDTALRYAKERSQFGKPIAGFQLQQKKLAEMITEITKAQLL 308
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G+ +P S+ K A A + R++LGG GI ++ V + +M
Sbjct: 309 NWRLGVLMNEGSASPQQVSMAKRNSCAIATQICRDARQILGGMGITGEYPVMRHMM 364
>gi|448396784|ref|ZP_21569232.1| acyl-CoA dehydrogenase 1 [Haloterrigena limicola JCM 13563]
gi|445673313|gb|ELZ25874.1| acyl-CoA dehydrogenase 1 [Haloterrigena limicola JCM 13563]
Length = 389
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 192/350 (54%), Gaps = 4/350 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q + L EE+ +R RE + + P + E++E FP +IPK+G L ++
Sbjct: 3 DFVQLEADLGQEERLIRETAREFVTDHVRPDIGEHFENGTFPTQLIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP+L +
Sbjct: 63 GYGSPNVSETAYGLVMQELEAGDSGIRSMASVQGALVMYPIHAYGSEAQKEEWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARN--T 222
+ C+ LTEP +GS+ SA+ T A + G ++L G K WI N+ AD+ V++AR+
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETHAERAPNGDGYVLNGSKTWITNAPIADIAVVWARDRSA 182
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
T + + G+LV+ D G+T ++I+ K+ +R G+I L V VP + LPGV+ +
Sbjct: 183 TDDPVRGFLVETDRDGVTTSEIDGKLSMRASITGEIGLNDVSVPAANVLPGVSGMKGPLS 242
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + ++ Y ER+QFG P+ FQ+ Q KL +M I L
Sbjct: 243 CLTQARYGIAWGAVGAARDCFEAARDYATEREQFGGPIGRFQLQQGKLAEMATQITLGQL 302
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ +RL L E+G + P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 LAYRLADLKERGELRPQHVSMAKRNNVRMAREQSRVAREMLGGNGITTDY 352
>gi|448579014|ref|ZP_21644330.1| glutaryl-CoA dehydrogenase [Haloferax larsenii JCM 13917]
gi|445724367|gb|ELZ76000.1| glutaryl-CoA dehydrogenase [Haloferax larsenii JCM 13917]
Length = 387
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY ++ L+SEE+ VR + R +E+++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLGMEEDLSSEEKLVRDEARRFVEEQVKPDIGEHFENGTFPMDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GSE QK+++LP+L
Sbjct: 63 GYGLPGLGDRAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSEAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ + + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSNPAGMETKAEQDADGYVLNGSKTWITNSPIADVAVVWARDVSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI++K+ +R G+I L V VP+E+ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIDDKLSMRASVTGEIGLDDVRVPEENVLPGVEGMRGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R+QFG P+A FQ+ Q KL +M I L
Sbjct: 243 TQARYGIAWGVVGAARDSFEEALQYSKDREQFGGPIARFQLQQGKLAEMATQITNAQLQA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + S+ K AR+ RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGELEHQQVSMAKRHNVRVARDVTRTAREMLGGNGITTDY 350
>gi|325964229|ref|YP_004242135.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470316|gb|ADX74001.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 401
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 197/361 (54%), Gaps = 12/361 (3%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
++F SD D LL+++E R +VR+ + I P +A +++ A FP + +LG L
Sbjct: 9 AEFDADPSDILALDSLLSTDELNTRQRVRDFTHQRIKPGIARWYDDAVFPLELAQELGEL 68
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
V G ++GYGCPG S +A E+ D+ TF+ V SLAM I GSE+QKQ+
Sbjct: 69 GVLGMHLEGYGCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHTWGSEDQKQE 128
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATK----VEGGWILEGQKRWIGNSTFADV 214
+LP +A I C+ALTEP GSD SA+ T A + E GW+L G KRWIG ++ A V
Sbjct: 129 WLPRMAAGEIIGCFALTEPTAGSDPSAMATLAWRDGPGEEAGWVLNGTKRWIGLASVAGV 188
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+V++A T + ++G+LV PG+T I K+ +R D++ V + E LP
Sbjct: 189 MVVWA--ATDDGVHGFLVPAGTPGVTAVPIPQKLSMRASIQCDVVFDDVRLGPEALLPAA 246
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L +R +AW +G + Y+ Y +ER QFG PLA +Q+ Q+KLV ML
Sbjct: 247 RGLRGPFTCLNEARYGIAWGAMGAARDSYEAALAYSQERLQFGKPLAGYQLTQEKLVNML 306
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSD 391
IQ L+ L +L + G + P SLGK RE +A+ RE +LGGNGI D
Sbjct: 307 LEIQKGTLLALHLGRLKDAGKLRPEQISLGK---LNNVREALAIAREARSILGGNGITLD 363
Query: 392 F 392
+
Sbjct: 364 Y 364
>gi|448589364|ref|ZP_21649523.1| glutaryl-CoA dehydrogenase [Haloferax elongans ATCC BAA-1513]
gi|445735792|gb|ELZ87340.1| glutaryl-CoA dehydrogenase [Haloferax elongans ATCC BAA-1513]
Length = 387
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY ++ L+SEE+ VR + R +E+++ P + E++E FP +IPK+G L +
Sbjct: 3 DYLGMEEDLSSEEKLVRDEARRFVEEQVKPDIGEHFENGTFPMDLIPKMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG + + E+ D+ + V SL + I GSE QK+++LP+L
Sbjct: 63 GYGLPGLGDRAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHAYGSEAQKEEWLPALGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ + + T A + G++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPQHGSNPAGMETKAEQDADGYVLNGSKTWITNSPIADVAVVWARDVSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI++K+ +R G+I L V VP+E+ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVTTNKIDDKLSMRASVTGEIGLDDVRVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ +Y K+R+QFG P+A FQ+ Q KL +M I L
Sbjct: 243 TQARYGIAWGVVGAARDSFEEALQYSKDREQFGGPIARFQLQQGKLAEMATQITNAQLQA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + S+ K AR+ RE+LGGNGI +D+
Sbjct: 303 HRLAELKERGDLEHQQVSMAKRHNVRVARDVTRTAREMLGGNGITTDY 350
>gi|385810358|ref|YP_005846754.1| glutaryl-CoA dehydrogenase [Ignavibacterium album JCM 16511]
gi|383802406|gb|AFH49486.1| Glutaryl-CoA dehydrogenase [Ignavibacterium album JCM 16511]
Length = 389
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 192/351 (54%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY++ + LLT EE+ +R VRE ++ EI PI+ EY KAEFP H++ K+ L + G T+
Sbjct: 8 DYFEIEPLLTEEERMIRDTVREFVDNEIIPIIEEYNRKAEFPLHLVSKMAELGLFGPTLP 67
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YGC + + + E+ R D+ +F V S+L M I GSEEQK +LP LA
Sbjct: 68 SKYGCSELNNVAYGLIMQELERGDSGIRSFASVQSALVMYPIFTFGSEEQKDYWLPKLAA 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP YGS+ + T A KV G++L G K WI N T ADV V++A+
Sbjct: 128 GEKIGCFGLTEPDYGSNPGGMITKAEKVSDGYLLNGAKMWITNGTIADVAVVWAK--LDG 185
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+LV+K A G + +++ K LR +++ V VP+ + L ++ L
Sbjct: 186 VVRGFLVEKGAKGFSSPEMKGKHSLRASVTSELIFDNVLVPESNLLSKTEGLKNALMCLN 245
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G M YD Y K R QF P+AA+Q+ Q+KLV ML I L+
Sbjct: 246 QARYGIAWGVVGAMMACYDTALNYAKSRIQFSKPIAAYQMTQEKLVYMLTEITKAQLLNL 305
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L +L +KG + SL K +A E + RE+LG NGIL ++ V +
Sbjct: 306 QLGRLKDKGTLKFTQVSLAKRNNCEKALEIARMSREILGANGILDEYPVMR 356
>gi|163789384|ref|ZP_02183823.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
gi|159875238|gb|EDP69303.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
Length = 401
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 201/355 (56%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +F + LT E V +VR+ + + + P++ +YW++ EFP + + +
Sbjct: 14 EDILKFSEKLTDGEIEVLQRVRKAVNEHLKPVINDYWKRGEFPTEEFKHVAKTGLISDPV 73
Query: 106 KGYGCPGHSVTGAAIAI---AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
P G + ++ + DAS +TF VH+ L + L GS EQ+ ++LP
Sbjct: 74 LFENQPNRFTWGNTYFLFLAYDLYKFDASIATFFGVHAGLGYFSFLLGGSPEQQMRWLPK 133
Query: 163 LAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
L C+ALTEP +GSD A+ L TTA + WI+ G+KRWIG ++ AD++ ++AR+
Sbjct: 134 LQNFELQTCFALTEPEHGSDTAAGLATTARREGDKWIINGEKRWIGGASSADLIPVYARD 193
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N++ ++V+K GL+V I++KI LRIVQNG+I L V V + +RL +N F+D +
Sbjct: 194 LEDNKVKCFIVEKGQKGLSVDDIDDKIALRIVQNGNIHLDNVEVLESNRLQNINGFKDVA 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
K+L +R VA+ G+ G Y R QFG P+A+FQ+ Q+KL +M GN +
Sbjct: 254 KILYATRAGVAYAGAGMMAGSLAAALEYTTTRVQFGKPIASFQLVQEKLARMQGNAVTAL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L E+G + +ASL K + R RET ALGRE+ GGNGI + VA+
Sbjct: 314 ALSARIAELQERGEYSEINASLAKMNNSLRLRETAALGREVCGGNGITLERNVAR 368
>gi|184201297|ref|YP_001855504.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
gi|183581527|dbj|BAG29998.1| putative acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
Length = 396
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 201/367 (54%), Gaps = 6/367 (1%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P A+P + D + L SEE+ + E ++ E+ E+W + E ++
Sbjct: 3 PAASPQRATALPSPDLLHLEHQLGSEERERLRAITEHLQSEVRHQSVEWWNREELARDLL 62
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
P L L + G S + A+IAR D S S + +H+ L + T+ GS
Sbjct: 63 PALADL-----GLGRLAESGGSRLFQNLVHAQIARADLSLSALLGIHNELIVGTLEAFGS 117
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTF 211
EEQKQ +LP L +L + + LTEP +GSD A L TTAT+ GW+L G KRWIG T
Sbjct: 118 EEQKQTWLPGLKELRQLGAFCLTEPEHGSDIAGGLATTATRDADGWVLNGSKRWIGLGTV 177
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
AD+ +++AR+T + I + V PG TKIE+K+GLRI+QN DI L + +P + L
Sbjct: 178 ADLALVWARDTADDLIKCFAVDTSLPGYAATKIEHKMGLRIMQNADIELTDLRLPADALL 237
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
PG SFQ + +L SR V WQ +G + D+ Y ER QFG PLA+FQ+ QQ +
Sbjct: 238 PGAASFQAANGLLKDSRAWVGWQAVGAQQSILDIVRDYALERIQFGRPLASFQLVQQVIA 297
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
++ GN+ A + ++ ++ + + A+L KS T AR++ + R+ LGGNG+LS
Sbjct: 298 EVAGNLAASSGMMAQVTRVQDADELAMMQAALAKSTATRLARQSASQARDALGGNGLLSH 357
Query: 392 FLVAKVI 398
+ +AKV+
Sbjct: 358 YGIAKVM 364
>gi|336253278|ref|YP_004596385.1| glutaryl-CoA dehydrogenase [Halopiger xanaduensis SH-6]
gi|335337267|gb|AEH36506.1| Glutaryl-CoA dehydrogenase [Halopiger xanaduensis SH-6]
Length = 390
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 195/351 (55%), Gaps = 5/351 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + L EE+ +R RE + +++ P + +++E+ FP +IP++G L ++
Sbjct: 3 DFVDLEADLDEEERLIRDTAREFVAEQVKPDIGDHFEEGTFPTDLIPEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP L +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIRAYGSEAQKEEWLPVLGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ + + T A + G++L G K WI N+ AD+ V++AR+ ++
Sbjct: 123 EAVGCFGLTEPEHGSNPAGMETYAERDGSGYVLNGSKTWITNAPIADLAVVWARDRSSEG 182
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ + G+LV+ D G+T +I+ K+ +R G+I L V VP+E+ LPGV+ +
Sbjct: 183 EGDDPVRGFLVETDRDGVTTNEIDGKLSMRASITGEIGLHDVHVPEENVLPGVSGMKGPL 242
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + ++ Y ER+QFG P+ FQ+ Q+KL +M I
Sbjct: 243 SCLTQARYGIAWGAVGAARDCFEQAREYALEREQFGGPIGRFQLQQEKLAEMATQITLAQ 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ +RL L E+G + P H S+ K ARE + RE+LGGNGI +D+
Sbjct: 303 LLAYRLADLKERGDLRPQHVSMAKRNNVRTAREQSKVAREMLGGNGITTDY 353
>gi|448478010|ref|ZP_21603817.1| acyl-CoA dehydrogenase domain protein [Halorubrum arcis JCM 13916]
gi|445822964|gb|EMA72708.1| acyl-CoA dehydrogenase domain protein [Halorubrum arcis JCM 13916]
Length = 390
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 191/352 (54%), Gaps = 7/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ I ++W FP +IPK+G + ++
Sbjct: 3 DYFDMESTLSEEERMLVDSARSFIDGEVEDI-GQHWIDGTFPMELIPKMGEMGFYAPNLE 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP L
Sbjct: 62 GYGLPGVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDAQKEEWLPKLGTG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEG----GWILEGQKRWIGNSTFADVLVIFARNT 222
+ C+ LTEP +GS+ SA+ T A + G G++L G K WI NS ADV V++A++
Sbjct: 122 EAVGCFGLTEPEHGSNPSAMETRAERAGGHAGDGYVLNGSKTWITNSPIADVAVVWAKDH 181
Query: 223 TTN--QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + + G+LV+ D G+T KI+ K+ LR G+I L+ V+VP E+ LP V +
Sbjct: 182 TEDGTPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQDVYVPAENVLPEVTGMKGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + +++ Y +R+QFG P+ FQ+ QQKL +M I
Sbjct: 242 LSCLTQARYGIAWGAVGAAQDCFEVAREYATDREQFGKPIGGFQMQQQKLAEMATQITLA 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 QLLAHRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 353
>gi|433589859|ref|YP_007279355.1| acyl-CoA dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|448332543|ref|ZP_21521775.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pellirubrum DSM 15624]
gi|433304639|gb|AGB30451.1| acyl-CoA dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|445626397|gb|ELY79743.1| acyl-CoA dehydrogenase domain-containing protein [Natrinema
pellirubrum DSM 15624]
Length = 389
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ + LT EE+ +R RE ++ + P + +++E FP +IP++G + +
Sbjct: 3 DFLDLESELTDEERLIRDTAREFVDDRVRPTIGDHFENGTFPTDLIPEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GS+ QK+++LP L
Sbjct: 63 GYGSPNVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHTYGSDAQKEEWLPKLGNG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ C+ LTEP +GS+ SA+ T A G++L G K WI NS ADV +++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETRAEADGDGYVLNGSKTWITNSPIADVAIVWARDNSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T +I++K+ LR G+I L V VP+E+ LPGV+ + L
Sbjct: 183 DPVRGFLVETDRDGVTTNEIDDKLSLRASITGEIGLNDVHVPEENVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y K+R QFG P+ FQ+ Q+KL +M I L+
Sbjct: 243 TQARFGIAWGAVGAARDCFETARAYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQLLV 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L + M P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 TRLTELKTRDEMRPQHVSMAKRNNVRMARNQSRIAREMLGGNGITTDY 350
>gi|345006386|ref|YP_004809239.1| glutaryl-CoA dehydrogenase [halophilic archaeon DL31]
gi|344322012|gb|AEN06866.1| Glutaryl-CoA dehydrogenase [halophilic archaeon DL31]
Length = 387
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R R +++E+ + ++W FP +I ++G L ++
Sbjct: 3 DYVGLEGDLGEEERLIRDTARRFVDEEVREDIGQHWLDGTFPTDLIEEMGDLGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + + V +L M I GSE+QK+ +LP+L
Sbjct: 63 GYGSPNVSETAYGLLMQELEACDSGLRSMVSVQGALVMYPIHAFGSEDQKEAWLPALGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA--RNTTT 224
+ C+ LTEP +GSD S++ T A K ++L G K WI NS ADV V++A R+
Sbjct: 123 EAVGCFGLTEPEHGSDPSSMETYAVKEGDEYVLNGSKTWITNSPIADVAVVWAKDRSEDG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N + G+LV+ D G+T KI K+ LR G+I L+ +P E+RLPGV + L
Sbjct: 183 NPVRGFLVEPDRDGVTTNKIGEKLSLRASITGEIALQNARIPQENRLPGVEGMKGPLACL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QFG P+A FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFETAREYAIDREQFGGPIARFQLQQDKLAEMATQITTSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
+RL L E+G + P H S+ K AR+ + RE+LGGNGI++D
Sbjct: 303 YRLADLKERGDLRPQHVSMAKRNNVRMARDQSRIAREMLGGNGIVAD 349
>gi|367467931|ref|ZP_09467841.1| Glutaryl-CoA dehydrogenase [Patulibacter sp. I11]
gi|365816986|gb|EHN11974.1| Glutaryl-CoA dehydrogenase [Patulibacter sp. I11]
Length = 397
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 193/363 (53%), Gaps = 2/363 (0%)
Query: 36 TPASKFPPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
T A+ PP DY D LL+ EE+A+R VR ++ + + +++E+ P + P
Sbjct: 2 TTATTAPPALQPHDYLNVDALLSDEERAIRDAVRAFVQDNVVGQVGDWFEQGTIPRELAP 61
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+LG L V G ++GYGC G + T IA E+ D+ + + V SLAM I GSE
Sbjct: 62 ELGKLGVLGMHLEGYGCAGATATAYGIACLELEAGDSGVRSLVSVQGSLAMFAIWRWGSE 121
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQKQ++LP +A I C+ LTEP GSD ++ TTA + WIL GQK WI N + AD
Sbjct: 122 EQKQEWLPRMAAGEAIGCFGLTEPDSGSDPGSMRTTARRDGDDWILHGQKMWITNGSIAD 181
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++AR + ++ G++V D PG + +I K+ LR +++L V +P + LP
Sbjct: 182 VAVVWARCSDDGKVRGFVVPTDTPGFSAPEIHKKMSLRASITSELVLDDVRLPADAVLPE 241
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
V S + L +R + W IG + ++ Y R QF P+A+FQI QQKL M
Sbjct: 242 VASLKGPLSCLNEARYGIVWGAIGAARACFESALDYAGTRIQFDKPIASFQIQQQKLANM 301
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ L+ L ++ + G + P H S+GK A + R++LGGNGI ++
Sbjct: 302 ALEVNRGTLLALHLGRMKDAGTLRPEHVSMGKLGNVNAALDVARTARQVLGGNGITLEYP 361
Query: 394 VAK 396
V +
Sbjct: 362 VIR 364
>gi|448445973|ref|ZP_21590542.1| glutaryl-CoA dehydrogenase [Halorubrum saccharovorum DSM 1137]
gi|445684583|gb|ELZ36957.1| glutaryl-CoA dehydrogenase [Halorubrum saccharovorum DSM 1137]
Length = 399
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 195/360 (54%), Gaps = 14/360 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ + P + ++++ FP +I ++G + +
Sbjct: 3 DYVGLEADLGEEERLIRDAAREFVDERVRPDIGDHFQAGTFPTDLIEEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T I + E+ D+ + V +L M I GS+EQK+++LP+L Q
Sbjct: 63 GYGLPNVSETAYGILMQELEACDSGLRSMASVQGALVMYPIHAYGSDEQKERWLPALGQG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT--- 223
+ C+ LTEP +GSD + + TTA K ++L+G K WI N+ ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPDHGSDPAGMETTARKEGDAYVLDGSKTWITNAPIADVAVVWARDESGAG 182
Query: 224 -----------TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
+ G+LV+ D G+T +I +K+ LR G+I L+ VP+E+ LP
Sbjct: 183 SVDGEDGAGADEAPVRGFLVETDRDGVTTNEIGDKLSLRASITGEISLQGARVPEENVLP 242
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
GV+ + L +R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +
Sbjct: 243 GVSGMKGPLSCLTQARYGIAWGAVGAARDCFEQAREYALDRDQFGGPIARFQLQQEKLAE 302
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M I L+ +RL +L E+G +TP H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 MATQITTAQLLAYRLAELKERGDLTPQHVSMAKRNNVRTARDQSRVAREMLGGNGITTDY 362
>gi|448456282|ref|ZP_21595085.1| glutaryl-CoA dehydrogenase [Halorubrum lipolyticum DSM 21995]
gi|445812467|gb|EMA62460.1| glutaryl-CoA dehydrogenase [Halorubrum lipolyticum DSM 21995]
Length = 395
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 196/356 (55%), Gaps = 10/356 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ + P + ++++ FP +I ++G + +
Sbjct: 3 DYVGLEADLGEEERLIRDTAREFVDERVRPDIGDHFQAGTFPTDLIEEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T I + E+ D+ + V +L M I GS +QK+++LP+L +
Sbjct: 63 GYGLPNVSETAYGILMQELEACDSGLRSMASVQGALVMYPIHAYGSGDQKERWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN----- 221
+ C+ LTEP +GS+ SA+ TTA K ++L+G K WI N+ ADV V++AR+
Sbjct: 123 EAVGCFGLTEPDHGSNPSAMETTARKDGDAYVLDGSKTWITNAPIADVAVVWARDESGGG 182
Query: 222 -----TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
T + G+LV+ D G+T +I++K+ LR G+I L+ V VP+ + LPGV+
Sbjct: 183 EDSGSTGEAPVRGFLVETDRDGVTTNEIDDKLSLRASITGEISLQGVRVPEANVLPGVSG 242
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L +R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +M
Sbjct: 243 MKGPLSCLTQARYGIAWGAVGAARDCFEQAREYALDRDQFGGPIARFQLQQEKLAEMATQ 302
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
I L+ +RL +L E+G +TP H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 ITTAQLLAYRLAELKERGDLTPQHVSMAKRNNVRTARDQSRVAREMLGGNGITTDY 358
>gi|374856488|dbj|BAL59342.1| glutaryl-CoA dehydrogenase [uncultured candidate division OP1
bacterium]
Length = 387
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 195/346 (56%), Gaps = 2/346 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ ++LLT E++ +R VR+ +++++ PI+ + +E FP +IPK+ L + G T+K
Sbjct: 7 DYFNIEELLTHEQKLIRNTVRQFVDEDVLPIIKDAFEAGHFPTELIPKMAKLGLLGATLK 66
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
YG G +A+ E+ R D+ +F V + L + I G+++QK ++LP L +
Sbjct: 67 EYGGAGIDAISYGLAMQELERGDSGVRSFCSVQNGLVIYPIYTFGTKDQKDRWLPGLIRG 126
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + TTA + +IL G K WI N+T A + +++A+
Sbjct: 127 ELIGCFGLTEPGHGSDPGGMETTAVRDGNFYILNGVKSWITNATLAHIAIVWAK--LDGV 184
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++V++ G + KIE+K+ +R G++ VP E LPGV + L
Sbjct: 185 VRGFVVERGTKGFSTAKIEHKLSMRASDTGELYFDNCRVPKEHLLPGVEGLRGPLMCLNQ 244
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G +M Y+ +Y KER QFG P+A+FQ+ QQKL +ML I L+ +R
Sbjct: 245 ARYSIAWGAVGAAMACYEEALQYAKERIQFGKPIASFQLVQQKLAEMLTEITKAQLLCYR 304
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L +L ++ A+ H SL K A A + + R++LG NGI D+
Sbjct: 305 LGQLKDQNALKHTHISLAKRNNVAMALKIAHMARDILGANGITLDY 350
>gi|294911653|ref|XP_002778031.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
gi|239886152|gb|EER09826.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
Length = 424
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 192/353 (54%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + +D+LT EE+ +R R + + P + + + F V + G + G I+
Sbjct: 42 DMFMLEDMLTEEERLIRDSARAFADAVLMPTVLDGFRNETFNKEVFLEFGKNGLLGPFIE 101
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD++ + V SSL M I + GSEEQK ++LP LA+
Sbjct: 102 GYGCAGASSVAYGLIAREVERVDSAFRSAFSVQSSLVMHPINIFGSEEQKSRWLPELAKG 161
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD S + TTA KV+GGW L G K WI NS ADV V++A+ T Q
Sbjct: 162 TKIGCFGLTEPNHGSDPSGMETTAKKVDGGWKLHGSKNWITNSPIADVCVVWAKCDTDGQ 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+LV+ + G++ KI K LR G IL+ VFVP+E LPGV + L
Sbjct: 222 VRGFLVETEWKGVSCPKILGKFSLRASPTGMILMDDVFVPEESLLPGVVGMKGPFACLNS 281
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R+ +AW IG + + Y +RKQFG PLAA Q+ Q+KL L I +M L+ R
Sbjct: 282 ARLGIAWGVIGAAEYCMETARGYTMDRKQFGRPLAANQLIQKKLADQLTEIHSMTLMAHR 341
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ + S+ K +A R++LGGNGI+ ++ + + +M
Sbjct: 342 ATQLKDEYKLHSNVISMCKRNNCGKALAIAREARDMLGGNGIVDEYGIIRHVM 394
>gi|294942138|ref|XP_002783395.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
gi|239895850|gb|EER15191.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
Length = 424
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 192/353 (54%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + +D+LT EE+ +R R + + P + + + F V + G + G I+
Sbjct: 42 DMFMLEDMLTEEERLIRDSARAFADAVLMPTVLDGFRNETFNKEVFLEFGKNGLLGPFIE 101
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD++ + V SSL M I + GSEEQK ++LP LA+
Sbjct: 102 GYGCAGASSVAYGLIAREVERVDSAFRSAFSVQSSLVMHPINIFGSEEQKSRWLPELAKG 161
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD S + TTA KV+GGW L G K WI NS ADV V++A+ T Q
Sbjct: 162 TKIGCFGLTEPNHGSDPSGMETTAKKVDGGWKLHGSKNWITNSPIADVCVVWAKCDTDGQ 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+LV+ + G++ KI K LR G IL+ VFVP+E LPGV + L
Sbjct: 222 VRGFLVETEWKGVSCPKILGKFSLRASPTGMILMDDVFVPEESLLPGVVGMKGPFACLNS 281
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R+ +AW IG + + Y +RKQFG PLAA Q+ Q+KL L I +M L+ R
Sbjct: 282 ARLGIAWGVIGAAEYCMETARGYTMDRKQFGRPLAANQLIQKKLADQLTEIHSMTLMAHR 341
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ + S+ K +A R++LGGNGI+ ++ + + +M
Sbjct: 342 ATQLKDEYKLHSNVISMCKRNNCGKALAIAREARDMLGGNGIVDEYGIIRHVM 394
>gi|222480983|ref|YP_002567220.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
ATCC 49239]
gi|222453885|gb|ACM58150.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
ATCC 49239]
Length = 386
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 187/348 (53%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ I ++W FP +IPK+G + ++
Sbjct: 3 DYFDMESTLSEEERMLVDSARSFIDGEVEDI-GQHWIDGTFPMDLIPKMGEMGFYAPNLE 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+ QK+++LP L
Sbjct: 62 GYGLPGVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDAQKEEWLPKLGTG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++ T
Sbjct: 122 EAVGCFGLTEPEHGSNPSAMETRAEADGDDYVLNGSKTWITNSPIADVAVVWAKDHTEEG 181
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+ LP V + L
Sbjct: 182 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQDVHVPAENVLPEVTGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G +M +++ Y +R+QFG P+ FQ+ QQKL +M I L+
Sbjct: 242 TQARYGIAWGAVGAAMDCFEVAREYATDREQFGKPIGGFQMQQQKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|313117069|ref|YP_004038193.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
gi|448286353|ref|ZP_21477585.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
gi|312295021|gb|ADQ69057.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
gi|445574955|gb|ELY29442.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
Length = 387
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L+SEE+ +R VRE ++ E+ P +A+++ + FP +I + G L + ++
Sbjct: 3 DYVDLESKLSSEERMIRDSVREFVQNEVKPDIADHYVEGTFPTELITEFGELGLYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S + + E+ D+ + V +L M I GSE QK ++LP L
Sbjct: 63 GYGLPNVSERAYGLIMQELEAGDSGLRSMASVQGALVMYPIHAFGSEAQKDEWLPKLGSG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A + ++L G K WI NS +DV V++AR+ ++
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETYAERDGDEYVLNGSKTWITNSPISDVAVVWARDRSSED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI++K+ LR G+I L+ V +P E+ LP V + L
Sbjct: 183 TPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIALQNVRIPTENVLPNVKGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG + + Y +R+QFG P+ FQ+ QQ L +M I L+
Sbjct: 243 TQARYGIAWGAIGAAKDAFREAQDYATDREQFGQPIGGFQLQQQNLAEMATQITLAELLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G + P H S+ K AR + RE+LGGNGI +D+
Sbjct: 303 HRLAELKEQGNLRPEHVSMAKRNNVRMARNQTRVAREMLGGNGITTDY 350
>gi|380300985|ref|ZP_09850678.1| acyl-CoA dehydrogenase [Brachybacterium squillarum M-6-3]
Length = 426
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 199/368 (54%), Gaps = 17/368 (4%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
PP A Y F + + +A R + +E+ P + ++W++ E+P H++ +LG L +
Sbjct: 31 LPPEADHYALFQQVAGEDLEAWRTA--RSIAEEVLPEINDWWDRGEYPLHLLGRLGELDL 88
Query: 101 AGGTIKGYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
G PGH S + E++R+D S T + V LA+ +I L GSEEQKQ
Sbjct: 89 ---FTDGLRLPGHRQLSPLATGLVNMELSRLDGSVGTMVGVQGGLALRSIVLLGSEEQKQ 145
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+++ +A A +ALTEP +GSD+ +L TTA + GW+L G+KRWIGN V V+
Sbjct: 146 RWVEPIAAGTEYAAFALTEPDHGSDSVSLETTARREGDGWVLTGEKRWIGNGVNGHVTVV 205
Query: 218 FAR---------NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
+AR + Q++G+LV++D PG T I K+ LR + I L V + E
Sbjct: 206 WARVDDPEDLDGSGLHGQVSGFLVEQDLPGYTAEVIRGKVALRAIHQAQITLDGVRLRVE 265
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
RLP SF+DT++VL +R VAW +G + Y+ + + R QFG PLA Q Q
Sbjct: 266 ARLPRARSFKDTARVLFATRAGVAWGALGHATACYESALEHARTRIQFGRPLAKAQHVQV 325
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+L ML + AM L R+ +L +G +TP ASL K T AR A R+LLGG+GI
Sbjct: 326 RLADMLQTLTAMQLTCVRIAQLEAEGTITPEQASLAKVHNTRGARSIAADARDLLGGSGI 385
Query: 389 LSDFLVAK 396
L + VA+
Sbjct: 386 LLENRVAR 393
>gi|294507110|ref|YP_003571168.1| acyl-CoA dehydrogenases [Salinibacter ruber M8]
gi|294343438|emb|CBH24216.1| Acyl-CoA dehydrogenases [Salinibacter ruber M8]
Length = 415
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 194/356 (54%), Gaps = 5/356 (1%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
PP D+Y + LL+ E + VR VR + +E+ PI+ +Y ++ EFP H+I +
Sbjct: 31 PP---DFYDLEALLSEEARHVRDNVRTVVTEEVMPIIEKYAQRGEFPRHLISTFAEHGLL 87
Query: 102 GGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G T+ YG GHS + + E+ R D+ +F V +L M I GS+ Q++++L
Sbjct: 88 GSTLPPEYGGEGHSNIAYGLIMQELERGDSGLRSFCSVTGALVMYPIWQYGSDAQRERWL 147
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P+LA I C+ LTEP GS+ + + T A + GW+++GQKRW N+T ADV VI+A+
Sbjct: 148 PALASGEAIGCFGLTEPDVGSNPAEMQTRARRDGDGWVIDGQKRWSTNATIADVAVIWAK 207
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ + + G+LV+ D G+ I++ LR +++L V VPD RLP V+ +
Sbjct: 208 DED-DTVRGFLVETDRDGVETPPIDDSWSLRAAVTSEVVLDDVRVPDAARLPEVSGLKGP 266
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + W IG +M +D ++ + R+QFG P+ FQ+ Q++LV M+ I
Sbjct: 267 LSCLTQARYGICWGTIGAAMACFDTARQHAQNREQFGGPIGRFQLMQERLVDMVQEITKA 326
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ WRL L E G M P SL K A + R++LGGNG+ S + V +
Sbjct: 327 QLLNWRLGTLKEAGTMRPQQVSLAKRNNCQTALDVARSARQVLGGNGVTSMYPVMR 382
>gi|448437342|ref|ZP_21587368.1| acyl-CoA dehydrogenase domain protein [Halorubrum tebenquichense
DSM 14210]
gi|445681279|gb|ELZ33714.1| acyl-CoA dehydrogenase domain protein [Halorubrum tebenquichense
DSM 14210]
Length = 386
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 187/348 (53%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ P M ++W FP ++PK+G + +
Sbjct: 3 DYFDMESTLSEEERLLVDSARSFIDGEV-PDMGDHWIDGTFPTELVPKMGEMGFYAPNLD 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 62 GYGLPDVSERAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDEQKEEWLPRLGAG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTT 224
+ C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++
Sbjct: 122 EAVGCFGLTEPEHGSNPSAMETMAEPDGDKYVLNGSKTWITNSPIADVAVVWAKDHGEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+RLPGV+ + L
Sbjct: 182 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNVRVPAENRLPGVSGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + +++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 242 TQARYGIAWGAVGAAADCFEVAREYATDREQFGKPIGGFQLQQEKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|448534642|ref|ZP_21621800.1| acyl-CoA dehydrogenase domain protein [Halorubrum hochstenium ATCC
700873]
gi|445704253|gb|ELZ56170.1| acyl-CoA dehydrogenase domain protein [Halorubrum hochstenium ATCC
700873]
Length = 386
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 187/348 (53%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ P M ++W FP +IPK+G + +
Sbjct: 3 DYFDMESTLSEEERLLVDSARSFIDGEV-PDMGDHWIDGTFPTELIPKMGEMGFYAPNLD 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S + + E+ D+ + V +L M I GS+EQK+++LP L
Sbjct: 62 GYGLPDVSERAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDEQKEEWLPRLGGG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTT 224
+ C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++
Sbjct: 122 EAVGCFGLTEPEHGSNPSAMETMAEPDGDEYVLNGSKTWITNSPIADVAVVWAKDHGEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+RLPGV+ + L
Sbjct: 182 TPVRGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNVRVPAENRLPGVSGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + +++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 242 TQARYGIAWGAVGAAADCFEVAREYATDREQFGKPIGGFQMQQEKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|344203039|ref|YP_004788182.1| glutaryl-CoA dehydrogenase [Muricauda ruestringensis DSM 13258]
gi|343954961|gb|AEM70760.1| Glutaryl-CoA dehydrogenase [Muricauda ruestringensis DSM 13258]
Length = 392
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 193/356 (54%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + VR R+ ++++I+PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYNLDDLLSEEHKLVRDAARQWVKRDISPIIEEYAQKAEFPKQIIGGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFAYGSEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI NS FADV +++A+N
Sbjct: 128 ATGEWMGCFGLTEPNHGSNPGGMETKFKDAGDHYVLNGAKLWISNSPFADVAIVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LPG N
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPGKNGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AA+Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERVQFGKPIAAYQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+RL +L +G T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AFRLGQLKNEGKATTAQISMAKRNNVDMAIKIAREARQILGGMGITGEYSIMRHMM 362
>gi|83816198|ref|YP_445243.1| acyl-CoA dehydrogenase domain-containing protein [Salinibacter
ruber DSM 13855]
gi|83757592|gb|ABC45705.1| Acyl-CoA dehydrogenase, C-terminal domain family [Salinibacter
ruber DSM 13855]
Length = 398
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 195/361 (54%), Gaps = 5/361 (1%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
P + PP D+Y + LL+ E + VR VR + +E+ PI+ +Y ++ EFP H+I
Sbjct: 9 PTAFDPP---DFYDLEALLSEEARHVRDDVRTVVTEEVMPIIEKYAQRGEFPRHLISTFA 65
Query: 97 ALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
+ G T+ YG GHS + + E+ R D+ +F V +L M I GS+ Q
Sbjct: 66 EHGLLGSTLPPEYGGEGHSNIAYGLIMQELERGDSGLRSFCSVTGALVMYPIWQYGSDAQ 125
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
++++LP+LA I C+ LTEP GS+ + + T A + GW+++G KRW N+T ADV
Sbjct: 126 RERWLPALANGEAIGCFGLTEPDVGSNPAEMKTRARRDGDGWVIDGHKRWSTNATIADVA 185
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
VI+A++ + + G+LV+ D G+ I++ LR +++L V VPD RLP V+
Sbjct: 186 VIWAKDED-DTVRGFLVETDRDGVETPPIDDSWSLRAAVTSEVVLDDVRVPDAARLPEVS 244
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L +R + W IG +M +D ++ + R+QFG P+ FQ+ Q++LV M+
Sbjct: 245 GLKGPLSCLTQARYGICWGTIGAAMACFDTARQHAQNREQFGGPIGRFQLMQERLVDMVQ 304
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
I L+ WRL L E G M P SL K A + R++LGGNG+ S + V
Sbjct: 305 EITKAQLLNWRLGTLKEAGTMRPQQVSLAKRNNCQTALDVARSARQVLGGNGVTSMYPVM 364
Query: 396 K 396
+
Sbjct: 365 R 365
>gi|169237018|ref|YP_001690218.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
gi|167728084|emb|CAP14872.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
Length = 387
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 186/348 (53%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L SEE+ +R RE +++ + + E++ FP +IP++G + +
Sbjct: 3 DYVGLEADLDSEERLIRDTAREFVDEHVQDDIGEHYLDGTFPTELIPEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSE QK+++LP+L
Sbjct: 63 GYGLPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAFGSEAQKERWLPALGAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN- 225
+ C+ LTEP +GS+ SA+ TTA ++L G K WI NS ADV V++AR+ +
Sbjct: 123 EAVGCFGLTEPEHGSNPSAMETTAEPDGDEYVLNGSKTWITNSPIADVAVVWARDHGEDG 182
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G+T +I+ K+ LR G+I L+ V VP E RLPGV + L
Sbjct: 183 TPVRGFLVETDRDGVTTNEIDEKLSLRASITGEISLRNVRVPAESRLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QF P+ FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARNCFETAREYATDREQFDQPIGGFQMQQDKLAEMATQITTSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 HRLAGLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 350
>gi|338213927|ref|YP_004657984.1| glutaryl-CoA dehydrogenase [Runella slithyformis DSM 19594]
gi|336307750|gb|AEI50852.1| Glutaryl-CoA dehydrogenase [Runella slithyformis DSM 19594]
Length = 395
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 190/355 (53%), Gaps = 2/355 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D+YQ +DLLT E + VR V++ + +++ PI+ EY ++AEFP H+I K + G T+
Sbjct: 12 TDFYQLNDLLTEEHKMVRDAVQQMINRDVRPIIEEYAQRAEFPAHLIKKFAEIGAFGPTL 71
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + EI R D+ + + V SSL M I GSEEQ+QKYLP LA
Sbjct: 72 PPEYGGGGLDYISYGLMTQEIERCDSGMRSTVSVQSSLVMWPIYAYGSEEQRQKYLPKLA 131
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GS+ + + T+ +L G K WI NS AD+ V++A+N
Sbjct: 132 SGEMVGCFGLTEPNHGSNPAGMLTSFKDAGDHVVLNGAKLWITNSPVADIAVVWAKNEQ- 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G +V++ G + +I NK LR G+++ V VP E+ LP + + L
Sbjct: 191 GRIQGLIVERGMEGFSTPEIHNKWSLRASVTGELVFDNVRVPKENILPNIEGLRGPLGCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG ++ Y+ RY ER+QFG P+A FQ+ Q+KL +ML I L+
Sbjct: 251 DNARYGIAWGAIGAAIDCYETALRYSLEREQFGKPIAGFQLQQKKLAEMLTEITKAQLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L G T S+ K A R++LGG GI D+ + + +M
Sbjct: 311 WRLGTLKNNGKATTAQISMAKRNNVDMALHVAREARQMLGGMGITGDYPIMRHMM 365
>gi|448507790|ref|ZP_21615152.1| acyl-CoA dehydrogenase domain protein [Halorubrum distributum JCM
9100]
gi|448518659|ref|ZP_21617693.1| acyl-CoA dehydrogenase domain protein [Halorubrum distributum JCM
10118]
gi|445698005|gb|ELZ50059.1| acyl-CoA dehydrogenase domain protein [Halorubrum distributum JCM
9100]
gi|445704776|gb|ELZ56684.1| acyl-CoA dehydrogenase domain protein [Halorubrum distributum JCM
10118]
Length = 386
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 186/348 (53%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ + L+ EE+ + R ++ E+ P M ++W + FP +IPK+G + +
Sbjct: 3 DYFDMESTLSEEERLLVDSARSFVDGEV-PDMGDHWIEGTFPTDLIPKMGEMGFYAPNLD 61
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GS+ QK+++LP L
Sbjct: 62 GYGLPDVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHAFGSDGQKEEWLPRLGTG 121
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTT 224
+ + C+ LTEP +GS+ SA+ T A ++L G K WI NS ADV V++A++
Sbjct: 122 DAVGCFGLTEPEHGSNPSAMETMAEPDGDEYVLNGSKTWITNSPIADVAVVWAKDHGEEG 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
G+LV+ D G+T KI+ K+ LR G+I L+ V VP E+RLPGV + L
Sbjct: 182 TPARGFLVETDRDGVTTNKIDEKLSLRASITGEISLQNVRVPAENRLPGVEGMKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QFG P+ FQ+ Q+KL +M I L+
Sbjct: 242 TQARYGIAWGAVGAAQDCFETAREYATDREQFGKPIGGFQMQQEKLAEMATQITLAQLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E G M P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 302 HRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRIAREMLGGNGITADY 349
>gi|448468632|ref|ZP_21599901.1| glutaryl-CoA dehydrogenase [Halorubrum kocurii JCM 14978]
gi|445810366|gb|EMA60392.1| glutaryl-CoA dehydrogenase [Halorubrum kocurii JCM 14978]
Length = 398
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 197/359 (54%), Gaps = 13/359 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ + P + ++++ FP +I ++G + +
Sbjct: 3 DYVGLEADLGEEERLIRDTAREFVDERVRPDIGDHFQAGTFPTELIEEMGEMGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG S T I + E+ D+ + V +L M I GS++QK+++LP+L +
Sbjct: 63 GYGLANVSETAYGILMQELEACDSGLRSMASVQGALVMYPIHAYGSDDQKERWLPALGEG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ +A+ TTA + ++L+G K WI N+ ADV V++AR+ + +
Sbjct: 123 EAVGCFGLTEPDHGSNPAAMETTARRDGDAYVLDGSKTWITNAPIADVAVVWARDESGGR 182
Query: 227 -------------INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+ G+LV+ D G+T +I++K+ LR G+I L+ V VP+ + LPG
Sbjct: 183 GDAGNSDRSDDAPVRGFLVETDRDGVTTNEIDDKLSLRASVTGEISLQGVRVPETNVLPG 242
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
V+ + L +R +AW +G + ++ Y +R QFG P+A FQ+ Q+KL +M
Sbjct: 243 VSGMKGPLSCLTQARFGIAWGAVGAARDCFEQARAYAADRDQFGGPIARFQLQQEKLAEM 302
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
I L+ +RL +L E+G +TP H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 303 ATQITTAQLLAYRLAELKERGDLTPQHVSMAKRNNVRTARDQSRVAREMLGGNGITTDY 361
>gi|124007696|ref|ZP_01692399.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134]
gi|123986818|gb|EAY26590.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134]
Length = 406
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 193/357 (54%), Gaps = 3/357 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D+Y DDLLT E +R VR+ ++KEI+PI+ + E+ FP +++P+ G L + G T
Sbjct: 21 SPDFYGIDDLLTEEHILIRNSVRDFVKKEISPIIEDCAERNIFPEYLVPEFGKLGLFGPT 80
Query: 105 IKGYGCP--GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ P G + + EI R D+ + + V SL M I GSEEQK+KYLP
Sbjct: 81 VSTDYNPNGGLDYISYGLMMQEIERGDSGMRSTVSVQGSLVMFPIYTFGSEEQKKKYLPK 140
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
LA + C+ LTEP +GS+ S + + ++L G K WI NS AD+ V++A+N
Sbjct: 141 LASGEYLGCFGLTEPNHGSNPSGMESRLEDKGDHYVLNGAKMWITNSPKADIAVVWAKND 200
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I G +V++ G + I +K LR G+++ V +P E+ LPGV+ +
Sbjct: 201 E-GRILGVIVERGMEGFSTPTIHDKWSLRASVTGELVFNDVKIPKENVLPGVSGLKGPLN 259
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R ++W IG++M YD RY ERKQFG P+A FQ+ Q+KL +ML I L
Sbjct: 260 CLDSARYGISWGAIGVAMDCYDTARRYALERKQFGKPIAGFQLIQKKLAEMLTEITKAQL 319
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
V WRL L +G T SL K A T R++LGG GI ++ + + +M
Sbjct: 320 VSWRLGVLKNEGKATTAQVSLAKRNNIEIAMHTAREARQILGGMGITQEYSIMRHMM 376
>gi|284042455|ref|YP_003392795.1| acyl-CoA dehydrogenase [Conexibacter woesei DSM 14684]
gi|283946676|gb|ADB49420.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
14684]
Length = 395
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 193/363 (53%), Gaps = 4/363 (1%)
Query: 36 TPASKFPPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
T ++ PP +DY D LL+ EE+ +R VR + E+ P + E++E+A P +
Sbjct: 2 TASTTAPPPLRPNDYLGIDALLSDEERDIRDAVRAFVAGEVVPHVGEWFEQATIPRELAN 61
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+LG L V G + GYGC G S T +A E+ D+ + + V SLAM I GSE
Sbjct: 62 RLGDLNVLGMHLTGYGCAGASATAYGLACLELEAGDSGVRSLVSVQGSLAMFAIWRWGSE 121
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQKQ++LP +A+ I C+ LTEP GSD ++ T A + W+L GQK WI N T AD
Sbjct: 122 EQKQQWLPRMARGEAIGCFGLTEPDSGSDPGSMRTRARRDGDEWVLNGQKMWITNGTIAD 181
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++A+ T + + G+LV + PG + +I K+ LR +++L V +PD RLP
Sbjct: 182 VAVVWAQ--TDDGVRGFLVPRGTPGFSAPEIHKKLSLRASVTSELVLDDVRLPDSARLPE 239
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
S + L +R + W G + ++ Y K R QF P+A+FQ+ QQ+L +M
Sbjct: 240 ATSLRGPLSCLNEARYGIVWGAAGAARACFEAALDYSKTRIQFDKPIASFQLVQQRLAEM 299
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ L+ L +L + G + P H S+GK A + R++LG NGI ++
Sbjct: 300 AVKVNQSTLLALHLGRLKDAGTLRPEHVSMGKLANVNAALDVARTARQVLGANGITLEYP 359
Query: 394 VAK 396
V +
Sbjct: 360 VIR 362
>gi|383758247|ref|YP_005437232.1| acyl-CoA dehydrogenase [Rubrivivax gelatinosus IL144]
gi|381378916|dbj|BAL95733.1| acyl-CoA dehydrogenase domain protein [Rubrivivax gelatinosus
IL144]
Length = 397
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 7/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + F+ L +E+AVR R+ + ++ P + + F ++ ++GAL + G TI
Sbjct: 7 DDPFLFEQQLAEDERAVRDAARDYCQDKLQPRVLSAAREERFDREILSEMGALGLLGCTI 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA
Sbjct: 67 EGYGCAGLNHVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRQKYLPKLAT 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD +++ T A V+GG++L G K WI NS ADV V++A+ T
Sbjct: 127 GEWVGCFGLTEPDHGSDPASMATRARPVDGGYVLSGSKMWITNSPIADVFVVWAKETDAQ 186
Query: 226 -------QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
I GY++ K GL+ KIE K+ LR G+I++ +VFVP E++LPGV +
Sbjct: 187 GAAGGQEAIRGYILDKGMKGLSAPKIEGKMSLRASITGEIVMDQVFVPAENKLPGVAGLK 246
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
L +R +AW +G + + RY ERKQFG PLA Q+ Q+KL M I
Sbjct: 247 GPFGCLNKARYGIAWGALGAAEFCWHAARRYTLERKQFGRPLAQNQLIQKKLADMQTEIT 306
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L ++G P SL K +A + L R++ GGNGI +F V +
Sbjct: 307 LGLQGCLRVGRLIDEGQAAPEMISLIKRNSCGKALDIARLARDMHGGNGIHDEFHVIR 364
>gi|110637812|ref|YP_678019.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
gi|110280493|gb|ABG58679.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
Length = 392
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 187/354 (52%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DYY DDLLT E + +R V+ M KE+ PI+ Y +++ FP H++ GAL + G T
Sbjct: 10 DYYNMDDLLTEEHKLIRQSVQAFMNKEVKPIIENYAQRSIFPDHLVKPFGALGLYGPTTP 69
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G I + EI RVD+ + V SL M I GSEEQK+KYLP LA
Sbjct: 70 VEYGGGGLDYISYGIMMQEIERVDSGMRSMASVQGSLVMFPIFKYGSEEQKKKYLPKLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ + + T+ +IL G K WI NS AD+ V++A++
Sbjct: 130 GELLGCFGLTEPDHGSNPAGMVTSIKDAGDHYILNGAKMWITNSPKADIAVVWAKDDA-G 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G +V++ G T +I NK LR G+++ V VP LP + K L
Sbjct: 189 RIKGIIVERGMEGFTTPEIHNKWSLRASITGELVFDNVKVPKTHVLPKADGLSGPLKCLD 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD+ Y ER QFG P+A FQ+ Q+KL +ML I L+ W
Sbjct: 249 SARYGIAWGALGAAMECYDIAKNYAMERVQFGKPIAGFQLTQKKLAEMLTEITKAQLLVW 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL L +G + G S+ K A + R++LGG GI ++ + + +M
Sbjct: 309 RLGMLKNEGKASTGQVSMAKRNNVDMALKVAREARQILGGMGITGEYPIMRHMM 362
>gi|444917600|ref|ZP_21237695.1| Glutaryl-CoA dehydrogenase [Cystobacter fuscus DSM 2262]
gi|444710941|gb|ELW51902.1| Glutaryl-CoA dehydrogenase [Cystobacter fuscus DSM 2262]
Length = 392
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 187/345 (54%), Gaps = 2/345 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DDLL+ EE+A R + ++ E+ PI+ +++ + FP H++P+L L V G +
Sbjct: 7 TDLMRLDDLLSDEEKAARDTMARFVDTEVLPIIGQHFREGTFPAHLVPRLAELGVLGANL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + + + E+ R D+ +F V SL M I GSEEQKQ++LP++A+
Sbjct: 67 QGYGCAGMNAVSQGLVLQELERGDSGLRSFASVQGSLCMFPIHSYGSEEQKQRFLPAMAR 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-- 223
I C+ LTE +GS+ + + T A + W+L G K WI N+T ADV V++A+
Sbjct: 127 GELIGCFGLTEADFGSNPAGMRTRARRDGDTWVLNGSKAWITNATIADVAVVWAKTDEGG 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G+LV+K PG +I K LR G++ + V VP+ + LPGV +
Sbjct: 187 AESVRGFLVEKGMPGFGAREIPGKFSLRASTTGELSFQDVRVPERNVLPGVKGLRGPLSC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +A+ G ++ ++ Y R QF P+AA+Q+ Q+KL ML I L+
Sbjct: 247 LNSARMSIAFSVTGAAIACFEGAREYALTRGQFDKPIAAYQLTQEKLADMLQEIVKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
RL +L ++G +TP SL K A + R + G NG+
Sbjct: 307 SLRLARLKDEGKLTPIMVSLAKRNNVKVALDIARSARSIYGANGV 351
>gi|409721349|ref|ZP_11269548.1| acyl-CoA dehydrogenase [Halococcus hamelinensis 100A6]
gi|448722255|ref|ZP_21704793.1| acyl-CoA dehydrogenase [Halococcus hamelinensis 100A6]
gi|445789966|gb|EMA40639.1| acyl-CoA dehydrogenase [Halococcus hamelinensis 100A6]
Length = 387
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 190/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY D L EE+A+R RE ++ + P +A+++E FP +IP++G +
Sbjct: 3 DYVGLDADLGEEERAMRDSAREFVDDRVRPEIADHFEAGTFPTELIPEMGERGFFAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG S + + E+ D+ + V +L M I GSE QK+++LP +
Sbjct: 63 GYGLADCSQKAYGLLMQELEAGDSGVRSMASVQGALVMYPIHTYGSEAQKERWLPDMGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
+ +ALTEP +GS+ + + T A K G ++L GQKRW N++ ADV++++AR+T+
Sbjct: 123 EAVGAFALTEPEHGSNPAGMETAAEKEGGEYVLTGQKRWSTNASIADVVLVWARDTSEEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D+ GL V I+ K+ LR + ++ L V V +ED LPGV+ + L
Sbjct: 183 DPVRGFLVETDSEGLDVRSIDEKLSLRASVSSELDLDGVRVSEEDVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G +M +D Y +R+QFG P+ FQ+ Q KL +M +I L+
Sbjct: 243 TQARYGIVWGAVGAAMDCFDTVQEYATDREQFGKPIGGFQLQQNKLAEMATSITTAQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G M P H S+ K AR+ + RE+LGGNGI ++
Sbjct: 303 HRLADLKERGEMRPQHVSMAKFNNVRMARDQSRVAREMLGGNGITLEY 350
>gi|305665430|ref|YP_003861717.1| acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
gi|88710185|gb|EAR02417.1| Acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
Length = 392
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 191/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDL + E VR R+ ++++I+PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYNLDDLFSEEHLLVRDAARQWVKRDISPIIEEYAQKAEFPKQIINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQKQKYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFAYGTEEQKQKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + T + ++L G K WI NS FAD+ V++A+N
Sbjct: 128 ATGEFMGCFGLTEPNHGSNPSGMETKFKDMGDHYLLNGAKLWISNSPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + K LR G+++ V VP E+ LPG N
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHGKWSLRASATGELIFDNVKVPKENLLPGKNGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+RL +L +G T S+ K A + R++LGG GI D+ + + +M
Sbjct: 307 AFRLGQLKNEGKATTAQISMAKRNNVDMAIKIAREARQVLGGMGITGDYSIMRHMM 362
>gi|184199718|ref|YP_001853925.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
gi|183579948|dbj|BAG28419.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
Length = 400
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 193/360 (53%), Gaps = 9/360 (2%)
Query: 37 PASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKL 95
P S+ P D FD LL+ EE A+R KVRE ++ I P +AE+++ A FP ++P++
Sbjct: 9 PMSELIPVDVMDLVSFDSLLSEEEIALRAKVREFVDATIKPNIAEWYDNAVFPLEIVPEM 68
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
L + G +KGYGC G S +A AE+ D+ TF+ V SLAM I GSEEQ
Sbjct: 69 AKLGLLGMHLKGYGCAGRSAVEYGLAGAELEAGDSGLRTFVSVQGSLAMSAIYKWGSEEQ 128
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A I C+ LTEP GSD S++ T A K W++ G KRWIG ++ A V
Sbjct: 129 KQQWLPRMAAGEAIGCFGLTEPTAGSDPSSMKTFARKDGEDWVINGAKRWIGLASVAKVA 188
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
VI+A+ T + I G++V D PG T I K+ +R DI L V +P LP
Sbjct: 189 VIWAQ--TDDGIRGFVVPTDTPGFKATPITAKLSMRASIQCDIELTDVRLPASAMLPEAK 246
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L +R + W +G + ++ Y +ER QF PL+ +Q+ QQKLV M
Sbjct: 247 GLRGPFSCLNEARYGIIWGAMGAARDSFEAALAYSQERMQFDRPLSGYQMTQQKLVNMAL 306
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
I L+ +L +L + G + S+GK RE + + RE +LGGNG+ D+
Sbjct: 307 EIDKGFLLALQLGRLKDAGKLQNHQISVGK---LNNCREAIKIAREARTILGGNGVTLDY 363
>gi|255532223|ref|YP_003092595.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255345207|gb|ACU04533.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
2366]
Length = 396
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 192/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LL+ E + +R RE ++KE++PI+ +Y +KAEFP H+I LG + G T
Sbjct: 12 APDYYLLDELLSEEHKLIRSVTREWVKKEVSPIIEDYAQKAEFPKHLIKGLGEIGAFGPT 71
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G T I + EI R D+ + V SL M I G+EEQ++KYLP L
Sbjct: 72 IPVEYGGAGLDYTAYGILMQEIERGDSGIRSTASVQGSLVMYPIYTYGTEEQRKKYLPKL 131
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + + ++L G K WI N+ FAD+ V++A++ +
Sbjct: 132 ATGELMGCFGLTEPDHGSNPSGMVSNIKDKGDHYLLNGAKMWISNAPFADIAVVWAKDES 191
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G T + NK LR G+++ V VP + P V +
Sbjct: 192 -GKIRGMVVERGMEGFTTPETHNKWSLRASATGELVFDNVKVPKANIFPDVTGLKGPLGC 250
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY K+R+QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 251 LNQARYGIAWGALGAAMDCYDTALRYAKQREQFGKPIGGFQLQQKKLAEMITEITKAQLL 310
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + TP S+ K A + R++LGG GI ++ + + +M
Sbjct: 311 VWRLGVLKSENRATPEQISMAKRNSVEVALDIARNARQMLGGMGITGEYAIMRHMM 366
>gi|332525843|ref|ZP_08401984.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
benzoatilyticus JA2]
gi|332109394|gb|EGJ10317.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
benzoatilyticus JA2]
Length = 397
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 7/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + + L +E+AVR R+ + ++ P + + F ++ ++GAL + G TI
Sbjct: 7 DDPFLLEQQLAEDERAVRDAARDYCQDKLQPRVLSAAREERFDREIMSEMGALGLLGCTI 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA
Sbjct: 67 EGYGCAGLNHVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRQKYLPRLAT 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD +++ T A V+GG++L G K WI NS ADV V++A+ T
Sbjct: 127 GEWIGCFGLTEPDHGSDPASMATRARPVDGGYVLSGSKMWITNSPIADVFVVWAKETDAQ 186
Query: 226 -------QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
I GY++++ GLT KIE K+ LR G+I++ +VFVP E++LPGV +
Sbjct: 187 GAAGGQEAIRGYILERGMKGLTAPKIEGKMSLRASITGEIVMDQVFVPAENKLPGVAGLK 246
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
L +R +AW +G + + RY ERKQFG PLA Q+ Q+KL M I
Sbjct: 247 GPFGCLNKARYGIAWGALGAAEFCWHAARRYTLERKQFGRPLAQNQLIQKKLADMQTEIT 306
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L ++G P SL K +A + L R++ GGNGI +F V +
Sbjct: 307 LGLQGCLRVGRLIDEGQAAPEMISLIKRNSCGKALDIARLARDMHGGNGIHDEFHVIR 364
>gi|440747871|ref|ZP_20927126.1| Glutaryl-CoA dehydrogenase [Mariniradius saccharolyticus AK6]
gi|436483613|gb|ELP39653.1| Glutaryl-CoA dehydrogenase [Mariniradius saccharolyticus AK6]
Length = 402
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 193/354 (54%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+YQ DDLLT E + +R +R+ +++EI+P + ++ ++A FP+ ++ K G + G I
Sbjct: 20 DFYQIDDLLTEEHKLIRSSIRDFVKREISPYIEDWAQRAHFPYEIVKKFGDVGAFGPQIP 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI R D+ + V SL M I GSE QK+KYLP LA
Sbjct: 80 ETYGGGGLDYIAYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEAQKKKYLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI NS AD+ V++A+N
Sbjct: 140 GEMLGCFGLTEPDHGSNPSGMKTNFRDMGDHYLLNGAKMWISNSPKADIAVVWAKNED-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + NK LR G+++ V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFSTPETHNKWSLRASATGELVFDNVKVPKENLLPGKSGLGAPLMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW IG +M +D RY ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 259 SARYGIAWGAIGAAMDCFDSARRYALERIQFDKPIASFQLVQKKLSEMLTEITKAQLLAW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L K+ ++G T H SL K A A E R++ GG GI ++ + + +M
Sbjct: 319 KLGKMMDEGKATTSHISLAKRNNVAMALEIAREARQIHGGMGITGEYPIMRHMM 372
>gi|379731086|ref|YP_005323282.1| acyl-CoA dehydrogenase [Saprospira grandis str. Lewin]
gi|378576697|gb|AFC25698.1| acyl-CoA dehydrogenase domain protein [Saprospira grandis str.
Lewin]
Length = 405
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 191/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
DYY DDLLT E++ R VRE + EI+PI+ + +E+A +P H+I L L G +
Sbjct: 21 GQDYYMIDDLLTDEQKIARDAVREFVRGEISPIIEDCYERAIYPRHLIKGLAELGAFGPS 80
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGC G T + + E+ R D+ + V SL M I GSEEQ+ KYLP L
Sbjct: 81 LPEKYGCAGTDETTYGLMMQELERGDSGIRSAASVQGSLVMYPIYRFGSEEQRMKYLPKL 140
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + + T + +IL G K WI NS ADV V++A++
Sbjct: 141 AAGEFIGCFGLTEPDHGSNPAGMITNIKEDGDHYILNGAKMWITNSPIADVAVVWAKDEE 200
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G +V D PG++ +I K+ LR G+++ + +P + LP V +
Sbjct: 201 -GVIRGLIVDMDTPGVSAPEIHGKLSLRASITGELVFEDARIPKANLLPNVKGLKGPLSC 259
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M Y+ RY ER+QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 260 LTKARYGIAWGALGAAMDCYESALRYSLEREQFGKPIAGFQLTQKKLAEMITEITKAQLL 319
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + G TP S+ K A A + R++ GG GI +++ + +M
Sbjct: 320 LWRLGGLMDAGKATPAQVSMAKRNNVAMALDIAREARQIHGGMGITNEYPCMRHMM 375
>gi|332663815|ref|YP_004446603.1| glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
gi|332332629|gb|AEE49730.1| Glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
Length = 407
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DYY DDLL+ + R VR +++E+ PI+ EY ++A+ P H+ L + G ++
Sbjct: 25 DYYNIDDLLSEDHLLAREAVRTWVKQEVTPIIEEYSDRAQCPTHLFKGLAEIGAFGPSLP 84
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G I + E+ R D+ + V SL M I GSEEQ++KYLP L
Sbjct: 85 EEYGGGGMDEIAYGIIMQELERGDSGIRSMASVQGSLVMYPIYRFGSEEQRRKYLPKLGN 144
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ I C+ LTEP +GS+ + + T +IL G K WI NS ADV V++A++ +
Sbjct: 145 GDFIGCFGLTEPDHGSNPNGMVTNIKDDGDAYILNGAKMWITNSPLADVAVVWAKDES-G 203
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G +V++ PG + +I K+ LR G+++ + V VP + LP V + L+
Sbjct: 204 IVRGVIVERGMPGFSAPEIHGKLSLRASITGELVFEDVRVPKSNLLPNVQGMKGPLSCLS 263
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+ W
Sbjct: 264 KARYGIAWGAIGAAMDCYDSALRYAKERNQFGRPIAQFQLTQKKLAEMITEITKAQLLAW 323
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL L +G TPG S+ K A E R++ GG GI +++ V + +M
Sbjct: 324 RLGTLANQGKATPGQISMAKRNNVNMALEIAREARQIHGGMGITNEYPVMRHMM 377
>gi|146299050|ref|YP_001193641.1| acyl-CoA dehydrogenase [Flavobacterium johnsoniae UW101]
gi|146153468|gb|ABQ04322.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
UW101]
Length = 393
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR R +++E++PI+ EY +KAEFP +I LG + G
Sbjct: 8 APDYYNLDDLLTDEHKLVRESARAWVKREVSPIIEEYAQKAEFPKQIIKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GSD ++ T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEYIGCFGLTEPDHGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENFLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A E R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGKATTAQISMAKRNNVNMAIEIAREARQMLGGMGITGEYSIMRHMM 362
>gi|167524186|ref|XP_001746429.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775191|gb|EDQ88816.1| predicted protein [Monosiga brevicollis MX1]
Length = 418
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 191/352 (54%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ D LTSEE + RE E + P + E + F ++ + G L + G TI
Sbjct: 35 DPFELDSQLTSEELMAKNTAREYCEASLQPRIIEAYRTETFDRSIMNEFGELGMLGSTID 94
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG S + E+ RVD++ + + V SSL M I G+E K+KYLP LA
Sbjct: 95 GYGCPGMSYVAYGLLAREVERVDSAYRSAMSVQSSLVMYPIHAYGTEAHKEKYLPRLATG 154
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ + LTEP +GSD ++ T A V+GG++L G K WI N+ ADV +I+A
Sbjct: 155 ELVGAFGLTEPDHGSDPGSMATKAKAVDGGYLLNGSKTWITNAPIADVFIIWA--NLDGD 212
Query: 227 INGYLVKKD-APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V++D + GLT KIE K+ LR G I+L VFVP+E+ P V + L
Sbjct: 213 IRGFVVERDGSEGLTTPKIEGKLSLRASITGQIMLDNVFVPEENLFPTVKGLKGPFGCLN 272
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + +++ +Y +R+QFG PLAA Q+ Q+K ML I +
Sbjct: 273 NARYGIAWGALGAAESCFEVARQYTLDRQQFGRPLAANQLMQKKFADMLTEINIGLQACL 332
Query: 346 RLCKLYEK-GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L E+ G TP S+ K +A + + R++LGGNGI D+ V +
Sbjct: 333 RVGRLREEHGEFTPDLVSMIKRNSCGKALDIARMTRDMLGGNGISEDYHVLR 384
>gi|448731461|ref|ZP_21713761.1| acyl-CoA dehydrogenase 8 [Halococcus saccharolyticus DSM 5350]
gi|445792214|gb|EMA42826.1| acyl-CoA dehydrogenase 8 [Halococcus saccharolyticus DSM 5350]
Length = 387
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 186/348 (53%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +E+++ P + E++E FP +I ++G L +
Sbjct: 3 DYVGLEADLDEEERLIRDTAREFVEEQVNPDIGEHFENGTFPEELITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+EQK+++L L
Sbjct: 63 GYGLPGVSETAYGLLMQELEAGDSGIRSMASVQGALVMYPIHAYGSDEQKERWLADLGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A K ++L G K WI NS ADV V++AR+T+
Sbjct: 123 EKVGCFGLTEPEHGSNPSAMETRAEKDGDEYVLSGSKTWITNSPIADVAVVWARDTSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI+ K+ +R G+I L V VP+ LPGV+ + L
Sbjct: 183 SPVRGFLVETDRDGVSTNKIDEKLSMRASVTGEIGLSNVRVPESAVLPGVSGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W IG + ++ Y +R+QFG P+ FQ+ Q KL +M I L+
Sbjct: 243 TQARYGITWGAIGAARDCFETARDYATDREQFGKPIGGFQLQQGKLAEMATQITTAQLLS 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K + AR+ + RE+LGGNGI D+
Sbjct: 303 HRLADLKERGDLRPQQVSMAKYNNVSMARDQARVAREMLGGNGITLDY 350
>gi|404451701|ref|ZP_11016658.1| glutaryl-CoA dehydrogenase [Indibacter alkaliphilus LW1]
gi|403762557|gb|EJZ23612.1| glutaryl-CoA dehydrogenase [Indibacter alkaliphilus LW1]
Length = 402
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 191/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+YQ DDLLT E + +R +R+ ++KEI+P + E+ + A FP+ ++ K G + G I
Sbjct: 20 DFYQVDDLLTEEHKLIRSSIRDFVKKEISPYIEEWAQDAHFPYEIVKKFGDVGAFGPQIP 79
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + E+ R D+ + V SL M I GSEEQ++++LP+LA
Sbjct: 80 SEYGGGGLDYISYGLIMQEVERGDSGMRSTASVQGSLVMYPIYKFGSEEQRKRFLPALAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI NS AD+ V++A+N
Sbjct: 140 GEMLGCFGLTEPDHGSNPSGMKTNFKDMGDHYLLNGAKMWISNSPKADIAVVWAKNEQ-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + NK LR G+++ V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFSTPETHNKWSLRASCTGELVFDNVKVPKENLLPGKSGLGAPLMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 259 SARYGIAWGAVGAAMDCYDSARRYALERIQFDKPIASFQLIQKKLAEMLSEITKAQLLNW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL KL ++G SL K A A E R++ GG GI D+ + + +M
Sbjct: 319 RLGKLMDEGKANTAQISLAKRNNVAMALEIAREARQIHGGMGITGDYPIMRHMM 372
>gi|295396987|ref|ZP_06807105.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
gi|294974768|gb|EFG50477.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
Length = 400
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 188/354 (53%), Gaps = 4/354 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG--GT 104
D Y F LT E + K+R+ +E +IAP + ++W++ FPF +G L +
Sbjct: 14 DVYGFSQKLTEIEVELLSKLRQVLEDQIAPTLKQHWKEETFPFEAFKAVGDLGLMNHPDL 73
Query: 105 IKGYGCPGH-SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
K P S E+AR D S +TF+ VH+ L T+ GS+EQ + P
Sbjct: 74 FKESQHPYKVSEYFNLFRYYELARTDMSLATFMTVHAGLGFTTLLQGGSQEQIDYFAPKF 133
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
C+ALTEP +GSD A + TTA + W+L G+KRWIG + AD + FARN
Sbjct: 134 TSFEWQTCFALTEPDHGSDIAGGMATTAVRDGDNWLLNGEKRWIGGAGSADFIPTFARNP 193
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N I ++V GLTV KI+ KI LR+VQNG I LK V V + RLP + SF+D S+
Sbjct: 194 ENNDILCFMVSTATEGLTVEKIDGKIALRLVQNGHIHLKNVQVAEAFRLPKIQSFRDVSR 253
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+L +R V+ G G +Y +R+QFG ++ FQI Q+KL +M N +
Sbjct: 254 ILYATRADVSHITAGGHAGALRAALKYTGQREQFGKKVSQFQITQEKLARMQANAATGLS 313
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +RL +L +G AS+ K RETVALGRE+ GGNGI D VA+
Sbjct: 314 LSYRLAELQTEGKYAEVPASIAKMQNARLLRETVALGREICGGNGITVDTEVAR 367
>gi|227832411|ref|YP_002834118.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
gi|262183729|ref|ZP_06043150.1| putative acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC
700975]
gi|227453427|gb|ACP32180.1| putative acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC
700975]
Length = 391
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 197/349 (56%), Gaps = 9/349 (2%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
FDDL S+ A K + AP++ ++W+ AE+P ++ +LG L V G
Sbjct: 16 FDDLSASD--AAGWKRAAQFREYSAPVINQHWQAAEYPLDLVQRLGDLDV---MTDGLAV 70
Query: 111 PGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLN 167
GH S GA +A+ E+ R DAS T I V + LAM +IA+ GS EQ+ +YLP +A +
Sbjct: 71 EGHEQMSTLGAGLALMEVTRADASMGTVIAVQAGLAMRSIAMLGSPEQQAEYLPQMASCS 130
Query: 168 TIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQI 227
+ + LTEPA+GSD+ AL TTA + W+L G+K+WIGN + +I+AR N +
Sbjct: 131 LLGAFGLTEPAHGSDSIALETTAVRDGDEWVLNGEKKWIGNGASGGITIIYARMEDGN-V 189
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++V ++APG + + IE K+ LR + I L +P ++LPG SF+D S+VL +
Sbjct: 190 GGFIVPQEAPGYSASVIEGKLSLRAIHQAHITLTDCRIPASNQLPGCRSFKDVSRVLTAT 249
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R+ V+W +G ++ Y++ Y+ ER QFG LA QI QQ+L M+ ++ M+L +
Sbjct: 250 RIGVSWMALGSAVACYEIARSYVLERVQFGRELAKAQIIQQRLANMVLDLSQMMLTCREV 309
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
G + P AS K T AR A R++LGG GIL + +A+
Sbjct: 310 SLRETAGTLAPEQASAAKLHNTRAARRIAADARDMLGGVGILLENDIAR 358
>gi|448732164|ref|ZP_21714446.1| acyl-CoA dehydrogenase 8 [Halococcus salifodinae DSM 8989]
gi|445805076|gb|EMA55303.1| acyl-CoA dehydrogenase 8 [Halococcus salifodinae DSM 8989]
Length = 387
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 187/348 (53%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +E+++ P + E++E FP +I ++G L ++
Sbjct: 3 DYVGLEADLDEEERLIRDTAREFVEEQVNPDIGEHFENGTFPEELITEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GS+EQK+++L L
Sbjct: 63 GYGLPGVSETAYGLLMQELEAGDSGIRSMASVQGALVMYPIHAYGSDEQKERWLADLGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GS+ SA+ T A K ++L G K WI NS ADV V++AR+T+
Sbjct: 123 EKVGCFGLTEPEHGSNPSAMETRAEKDGDEYVLSGSKTWITNSPIADVAVVWARDTSAED 182
Query: 227 --INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D G++ KI+ K+ +R G+I L V VP+ LPGV + L
Sbjct: 183 SPVRGFLVETDRDGVSTNKIDEKLSMRASVTGEIGLSNVRVPESAVLPGVTGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W IG + ++ Y +R+QF P+A+FQ+ Q KL +M I L+
Sbjct: 243 TQARYGITWGAIGAARDCFETARDYATDREQFDKPIASFQLQQGKLAEMATEITTAQLLS 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL L E+G + P S+ K + AR+ + RE+LGGNGI D+
Sbjct: 303 HRLADLKERGDLRPQQVSMAKYNNVSMARDQARVAREMLGGNGITLDY 350
>gi|373957715|ref|ZP_09617675.1| acyl-CoA dehydrogenase domain-containing protein [Mucilaginibacter
paludis DSM 18603]
gi|373894315|gb|EHQ30212.1| acyl-CoA dehydrogenase domain-containing protein [Mucilaginibacter
paludis DSM 18603]
Length = 393
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LL+ E + +R R+ ++KE++PI+ +Y ++AEFP ++ L + G T
Sbjct: 9 APDYYLLDELLSDEHKLIRQSARDWVKKELSPIIEDYAQRAEFPRQLLKGLAEIGAFGPT 68
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G I + EI R D+ + V SL M I GSEEQ++KYLP L
Sbjct: 69 IPVEYGGAGLDYIAYGIIMQEIERGDSGIRSTASVQGSLVMYPIYAYGSEEQRKKYLPKL 128
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ L T ++L G K WI N+ FAD+ V++A+N
Sbjct: 129 ASGELMGCFGLTEPDHGSNPGGLTTNFKDAGDHYLLNGAKMWISNAPFADIAVVWAKNEG 188
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G T + NK LR G+++ V VP ++ LP V+ +
Sbjct: 189 -GKIQGLIVERGMGGFTTPETHNKWSLRASATGELVFDNVKVPKDNLLPNVSGLKGPLGC 247
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 248 LNQARYGIAWGAIGCAMDCYDTALRYAKERVQFGKPIAGFQLQQKKLAEMITEITKAQLL 307
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + T S+ K A R++LGG GI D+ + + +M
Sbjct: 308 VWRLGVLKSENRATAAQISMAKRNSVETAITIAREARQILGGMGITGDYSIMRHMM 363
>gi|118366611|ref|XP_001016521.1| Acyl-CoA dehydrogenase, middle domain containing protein
[Tetrahymena thermophila]
gi|89298288|gb|EAR96276.1| Acyl-CoA dehydrogenase, middle domain containing protein
[Tetrahymena thermophila SB210]
Length = 420
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 204/372 (54%), Gaps = 34/372 (9%)
Query: 34 QATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
Q+ + + D +++ L EE +R K RE ++++I P + +Y EKA+FP V
Sbjct: 5 QSISQQLYTTDSLDILEYNFLYDEEENIIRKKFREVIQRDIKPHINQYIEKAQFPTFVRQ 64
Query: 94 KLGALRVAGGTIKGYGCP----GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
KL G K + P G I I+E+A +D+ S F+LV S+ M TI
Sbjct: 65 KLKEF----GLFKLFVGPPFGEGRRTRLIGILISEMAMIDSGLSLFMLVQWSVLMTTIEW 120
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG-------------- 195
GSE QKQ YLP L + I WALTEP YGSDAS L + +++G
Sbjct: 121 FGSEAQKQLYLPKLIDCDQIGGWALTEPNYGSDASGLESNVKEIDGKQIFKYNHIICKKS 180
Query: 196 GWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQN 255
G+IL G KRWIGN D++V++A+N TT QI G++V+ G+T IE+K+ +R+VQN
Sbjct: 181 GFILNGTKRWIGNGN-GDIVVVWAKNQTTKQIEGFIVELTQKGVTRQVIEHKLAVRMVQN 239
Query: 256 GDILLKKVFVPDEDRLPGVNSFQD-TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERK 314
+ + VF+P +LP SFQ+ T+K+L SR++ W GI+ GV C R L
Sbjct: 240 YHLTFENVFIPVNMKLPLATSFQESTNKILKHSRIVAVWISSGIARGV---CERAL---- 292
Query: 315 QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARE 374
Q+ P Q ++K++ M+ N Q+++L+ WR+ +LY+ +T G +L KS+ T R RE
Sbjct: 293 QYIEPK---QKPKKKVLSMISNTQSVLLMAWRVSELYDSKQLTLGQVALAKSYATTRTRE 349
Query: 375 TVALGRELLGGN 386
++LL N
Sbjct: 350 ICTQAKDLLVKN 361
>gi|163839654|ref|YP_001624059.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162953130|gb|ABY22645.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 393
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 182/346 (52%), Gaps = 1/346 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D LL+ E A R KVRE ++ I P +A +++ A FP ++P+LGAL V G +
Sbjct: 10 DVLNLDALLSDAELAQRDKVREFTDRRIKPNIARWFDNAHFPLELVPELGALGVLGMHLD 69
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + EI D+ TF+ V SLAM I GSE QK+KYL +A+
Sbjct: 70 GYGCAGASAVEYGLTAMEIEAGDSGIRTFVSVQGSLAMTAIHKWGSEAQKEKYLQPMARG 129
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ALTEP GSD A+ TTA + GW L G KRWIG ++ ADV +I+A
Sbjct: 130 ELIGCFALTEPEAGSDPGAMRTTAVRTAEGWRLNGAKRWIGLASIADVAIIWA-AVPEEG 188
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+LV PG + I K+ +R D+ +V +P++ LP + L
Sbjct: 189 VRGFLVPTSTPGFSAEPITGKLSMRASIQCDVQFNEVELPEDAILPLAKGLRGPFSCLNE 248
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + W +G + +++ Y ER+ FG+PL ++Q+ Q KLV M+ +Q L+
Sbjct: 249 ARYGIMWGSMGAARDAFEVALAYAAERQPFGSPLGSYQLTQAKLVDMMLELQKGQLLALH 308
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+L + G + P S+GK A E R +LGGNGI D+
Sbjct: 309 TGRLKDAGTLRPEQISVGKLNNVREALEICHQARSILGGNGITLDY 354
>gi|409098146|ref|ZP_11218170.1| glutaryl-CoA dehydrogenase [Pedobacter agri PB92]
Length = 396
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + +R RE ++KE++PI+ +Y +KAEFP H+I L + G T
Sbjct: 12 APDYYFLDELLTDEHKLIRDTAREWVKKEVSPIIEDYAQKAEFPKHLIKGLADIGAFGPT 71
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G T I + EI R D+ + V SL M I GSE+Q++KYLP L
Sbjct: 72 IPVEYGGAGLDYTAYGILMQEIERGDSGIRSTASVQGSLVMYPIYAYGSEDQRKKYLPKL 131
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T +IL G K WI N+ FAD+ V++A++ +
Sbjct: 132 ASGELMGCFGLTEPDHGSNPGGMVTNIKDAGSHYILNGAKMWISNAPFADIAVVWAKDES 191
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G T + NK LR G+++ V VP E+ P ++ +
Sbjct: 192 -GKIRGMVVERGMDGFTTPETHNKWSLRASATGELVFDNVQVPKENVFPEISGLKGPLGC 250
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 251 LNQARYGIAWGALGAAMDCYDTALRYSKERIQFGKPIGGFQLQQKKLAEMVTEITKGQLL 310
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 311 VWRLGVLKSENRATAEQISMAKRNSVEVALDIARNARQMLGGMGITGEYSIMRHMM 366
>gi|300709610|ref|YP_003735424.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448297620|ref|ZP_21487665.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299123293|gb|ADJ13632.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445578948|gb|ELY33346.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 387
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 190/348 (54%), Gaps = 2/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + + L EE++ R RE +++ + P +A ++E FP +IP++G ++
Sbjct: 3 DYVELEAELDDEERSYRDSAREFVDEHVRPEIAAHYEAGTFPEEIIPEMGERGFFATSLA 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +LAM I GSEEQK ++LP +
Sbjct: 63 GYGLPDASETAYGLVMQELEACDSGLRSMASVQGALAMYPIHAFGSEEQKDEWLPPMGTG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I +ALTEP +GSD S + T A + ++L+G+KRW NS ADVLV++AR+T++
Sbjct: 123 QAIGGFALTEPDHGSDPSRMETRAERDGDEYVLDGEKRWCTNSPIADVLVVWARDTSSEG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV+ D GL + I+ K+ LR +G+ + V +P+ + LP V + L
Sbjct: 183 EPVRGFLVETDRDGLDIDSIDGKLSLRASSSGEFTMDGVRIPEGNVLPDVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + ++ Y +R+QFG P+ FQ+ Q KL +M I L+
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARAYATDREQFGKPIGGFQLQQDKLAEMATRITTSQLLA 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL +L E+G M P H S+ K AR+ + RE+LGGNGI ++
Sbjct: 303 HRLAELKERGEMRPQHVSMAKRNNVEMARDQARVAREMLGGNGITDEY 350
>gi|395236556|ref|ZP_10414738.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|423350556|ref|ZP_17328209.1| hypothetical protein HMPREF9719_00504 [Turicella otitidis ATCC
51513]
gi|394488319|emb|CCI82826.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|404387455|gb|EJZ82573.1| hypothetical protein HMPREF9719_00504 [Turicella otitidis ATCC
51513]
Length = 395
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 190/348 (54%), Gaps = 6/348 (1%)
Query: 46 SDYYQ-FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+D+Y F D+ E A R + E+ +A+ WE A +P ++ G +
Sbjct: 10 ADFYDLFSDIDGPELDAWRQA--QAFAAEVRTRIAKDWENAHYPTDLVALAGKQGLLTDA 67
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ G P + + + E++R DAS +T I V + LAM I CGS EQ++ +L LA
Sbjct: 68 VDVPGQPTITPLASRLITMEVSRADASMATAIAVQAGLAMQAIDQCGSPEQREAWLGPLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
+ + +ALTEP +GSDA AL TTA K W+++G+K+WIGN D+ V++AR
Sbjct: 128 RAEKLGAFALTEPTHGSDAVALETTARKDGDSWVIDGKKKWIGNGHGGDITVVWARMEGG 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++ G+LV +DAPG I K+ LR + +I L V V + RLPG SF S
Sbjct: 188 DNDGEVGGFLVPQDAPGYHSQAIAGKVALRAIPQAEIELDGVRVDESQRLPGATSFLAAS 247
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
KVL+ +RV VAW +GI++ ++ ER+QFG PLA+FQI QQ+L ML + AM
Sbjct: 248 KVLSGTRVGVAWSALGIAIDCFETALNRATERRQFGKPLASFQIIQQRLADMLQKLTAMA 307
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L R+ +L +G + ASL K T AR A R+LLGG GIL
Sbjct: 308 LYCRRISQLEAEGRLRHQQASLAKVHNTRGARYIAAEARDLLGGTGIL 355
>gi|387790927|ref|YP_006255992.1| acyl-CoA dehydrogenase [Solitalea canadensis DSM 3403]
gi|379653760|gb|AFD06816.1| acyl-CoA dehydrogenase [Solitalea canadensis DSM 3403]
Length = 405
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY D+LLT E + VR VRE ++KEI+PI+ EY +K++FP H++ LG + G T
Sbjct: 21 SPDYYLLDELLTEEHKLVRSSVREYVKKEISPIIEEYAQKSQFPRHLVKSLGEIGAFGPT 80
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G I + E+ R D+ + V SL M I GSEEQ++KYLP L
Sbjct: 81 IPVEYGGGGMDYIAYGIIMQELERGDSGIRSTASVQGSLVMYPIYAYGSEEQRRKYLPKL 140
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
+ C+ LTEP +GS+ S + T +IL G K WI N+ FAD+ V++A++
Sbjct: 141 GSGEWLGCFGLTEPDFGSNPSGMITNIKDAGDHYILNGAKMWISNAPFADLAVVWAKDEQ 200
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G +V++ G + + NK LR G+++ V VP E+ P V +
Sbjct: 201 -GIIRGMVVERGMEGFSTPETHNKWSLRASATGELVFDNVKVPKENVFPNVQGLKGPLGC 259
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY KER QF P+ AFQ+ Q+KL +M+ I L+
Sbjct: 260 LNQARYGIAWGALGAAMDCYDTALRYSKERIQFDKPIGAFQLQQKKLAEMISEITKGQLL 319
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + T S+ K A R++LGG GI ++ + + +M
Sbjct: 320 VWRLGVLKSENRATAAQISMAKRNSVETALNIAREARQMLGGMGITGEYPIMRHMM 375
>gi|284035946|ref|YP_003385876.1| acyl-CoA dehydrogenase domain-containing protein [Spirosoma
linguale DSM 74]
gi|283815239|gb|ADB37077.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
Length = 402
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 196/366 (53%), Gaps = 3/366 (0%)
Query: 36 TPASKFPPCAS-DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
+P +K S D+Y DDLLT+E + VR VR +++EI PI EY ++AEFP H++PK
Sbjct: 8 SPRNKVDSFESPDFYCLDDLLTAEHKLVRSAVRNFVKREITPIAEEYAQRAEFPKHIVPK 67
Query: 95 LGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
G + V G TI YG G + EI R D+ + + V +SL M I GSE
Sbjct: 68 FGQIGVFGATIPTEYGGGGLDQISYGLMTQEIERGDSGMRSCVSVQNSLVMYPIWAFGSE 127
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
Q+QKYLP LA I C+ LTE +GSD + + + ++L G K WI N+ AD
Sbjct: 128 AQRQKYLPRLATGELIGCFGLTEANHGSDPGGMESNFIERSDYYLLNGSKLWITNANIAD 187
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+ +++ARN ++ +V++ G + +I+NK LR G+++ + V VP E+ LP
Sbjct: 188 IAIVWARNDQ-GKVRALIVERGMEGFSTAEIKNKWSLRASTTGELIFQDVQVPKENILPD 246
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+ K L +R ++W +G +M Y++ RY ER QFG P+A+FQ+ Q+KL +M
Sbjct: 247 SFGLKSALKCLEQARYGISWGALGAAMECYEVARRYALERIQFGKPIASFQLVQKKLAEM 306
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
L +I L+ WRL L + T S+ K A R++LG GI ++
Sbjct: 307 LTDITQGQLLCWRLGVLKNEDRATVAQISMAKRSNVEMALRVAREARQILGAMGISGEYP 366
Query: 394 VAKVIM 399
+ + +M
Sbjct: 367 IMRHLM 372
>gi|298207516|ref|YP_003715695.1| acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
gi|83850152|gb|EAP88020.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus
HTCC2559]
Length = 392
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR R+ ++++++PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYNLDDLLTEEHKLVRNAARDWVKRDVSPIIEEYAQKAEFPKQIIGGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQ++K+LP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGSEEQRKKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T ++L G K WI NS F DV V++A+N
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPGGMTTNFKDNGDHYLLNGAKLWISNSPFCDVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ + V VP E+ LPG +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKENLLPGKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L E+G T S+ K A R++LGG GI ++ + + M
Sbjct: 307 AWRLGVLREEGKATSAQISMAKRNNVEVAINIAREARQMLGGMGITGEYSIMRHSM 362
>gi|389876368|ref|YP_006369933.1| acyl-CoA dehydrogenase domain-containing protein [Tistrella mobilis
KA081020-065]
gi|388527152|gb|AFK52349.1| acyl-CoA dehydrogenase domain-containing protein [Tistrella mobilis
KA081020-065]
Length = 396
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 194/352 (55%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD FDD LT +E+ +R R+ + + + + F ++ ++GAL + G T+
Sbjct: 13 SDPLLFDDQLTEDERMIRDSARDFARDRLLTRVIDGTRREHFDREIMNEMGALGLLGPTL 72
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YGCPG S + E+ RVD+ + + V SSL M I GSEEQ++KYLP LA
Sbjct: 73 PEEYGCPGVSHVAYGLISREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRRKYLPKLA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD + T ATKV+GGW L G K WI NS AD+ V++A+ T
Sbjct: 133 TGEMVGCFGLTEPDHGSDPGGMKTRATKVDGGWRLNGAKMWITNSPIADIAVVWAK-TDD 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++V++ G + KI+ K+ LR G+I+L VFVP+++ LP V + L
Sbjct: 192 DVIRGFVVERGMDGFSTPKIQGKMSLRASITGEIVLDDVFVPEQNLLPNVKGLKGPFGCL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 252 NKARYGIAWGAMGAAEFCWHQARQYVIDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L ++G P SL K +A + L R++ GGNGI +F V +
Sbjct: 312 LRLGRLMDEGRAAPEAISLFKRNNVGKALDIARLARDMHGGNGISDEFHVIR 363
>gi|384097675|ref|ZP_09998795.1| acyl-CoA dehydrogenase domain protein [Imtechella halotolerans K1]
gi|383836557|gb|EID75964.1| acyl-CoA dehydrogenase domain protein [Imtechella halotolerans K1]
Length = 392
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYYQ D+LLT E + VR R +++EI+PI+ Y +KAEFP +I L + G
Sbjct: 8 APDYYQLDELLTEEHKLVRDAARSWVKREISPIIENYAQKAEFPKQIINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQIAYGLIMQEIERGDSGVRSTASVQSSLVMYPIFKYGSEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + T ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ASGEYMGCFGLTEPDFGSNPSGMVTNFKDKGDHYLLNGAKLWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LPG +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPGKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFDKPIAATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 AWRLGVLRNEGKATSAQISMAKRNNVEMAITIARDARQILGGMGITGEYSIMRHMM 362
>gi|300780127|ref|ZP_07089983.1| glutaryl-CoA dehydrogenase [Corynebacterium genitalium ATCC 33030]
gi|300534237|gb|EFK55296.1| glutaryl-CoA dehydrogenase [Corynebacterium genitalium ATCC 33030]
Length = 408
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 189/366 (51%), Gaps = 16/366 (4%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P A+D FD LL+ +E R +R +E EI P + +++E A PF +IP+ + G
Sbjct: 6 PLATDLINFDSLLSRDEIEWRDDIRSFVESEIKPHVGQWYEDAHVPFELIPRFAEKGMIG 65
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ GYGCPG S +A+ E+ D+ T V SLAM +I L G+EEQK+KYLP
Sbjct: 66 AHLSGYGCPGRSAVDYGLAMLEVEAADSGLRTIFSVLGSLAMTSIHLNGTEEQKEKYLPK 125
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFARN 221
+A + + LTEP GSD +++ T AT G GW+L G+KRWIG S +AD+ +I+A+
Sbjct: 126 MAAGELLGAFGLTEPTAGSDPASMTTRATYKPGEGWVLNGEKRWIGLSHYADLTIIWAKV 185
Query: 222 TTTN---------------QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
+T + I G++V+KD PG +I+ K+ +R+ I +K V
Sbjct: 186 STADLEAAGLDGFPEGRDETIAGFIVEKDTPGFDPQQIDKKLSMRVSTQAHIYMKDALVG 245
Query: 267 DEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQIN 326
++ L G + L +R + W +G + + Y KER QFG PLA FQ+
Sbjct: 246 EDKILSGRFGLKAPFMCLNEARYGIGWGVLGAARDSIECALAYAKERTQFGKPLAGFQLT 305
Query: 327 QQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGN 386
Q+KLV M + L+ + + + G + S+ K T A E R +LGGN
Sbjct: 306 QKKLVDMAVGLNQGYLLALHIGRQKDAGTLDISQISVAKLQNTRTAIEIAREARTILGGN 365
Query: 387 GILSDF 392
G+ D+
Sbjct: 366 GVTHDY 371
>gi|448737693|ref|ZP_21719729.1| acyl-CoA dehydrogenase [Halococcus thailandensis JCM 13552]
gi|445803490|gb|EMA53785.1| acyl-CoA dehydrogenase [Halococcus thailandensis JCM 13552]
Length = 391
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 189/352 (53%), Gaps = 6/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ +AP + ++E FP +I ++G L ++
Sbjct: 3 DYVGLEADLGQEERMIRDTAREFVDENVAPDIGSHFENGTFPEELITEMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S T + + E+ D+ + V +L M I GSEEQK+++LP LA
Sbjct: 63 GYGLPGVSETAYGLLMQELEAGDSGIRSMASVQGALVMYPIHAFGSEEQKERWLPDLANG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEG----GWILEGQKRWIGNSTFADVLVIFARNT 222
I C+ LTEP +GS+ + + T A + G ++L G K WI NS ADV V++AR+T
Sbjct: 123 EKIGCFGLTEPEHGSNPAGMETRAERASGHAGDEYVLSGSKTWITNSPIADVAVVWARDT 182
Query: 223 TT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ + + G+LV+ D G++ +I+ K+ +R G+I L V VP+ LPGV +
Sbjct: 183 SAEGSPVRGFLVETDKEGVSTNEIDEKLSMRASVTGEIGLSNVRVPESAVLPGVEGMKGP 242
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + W G + ++ Y +R+QF P+A+FQ+ Q KL +M I
Sbjct: 243 LSCLTQARYGITWGAAGAARDCFETARDYATDREQFDTPIASFQLQQGKLAEMATAITTA 302
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ RL L E+G + P S+ K + AR+ + RE+LGGNGI +D+
Sbjct: 303 QLLSHRLADLKERGDLRPQQVSMAKYNNVSMARDQARVAREMLGGNGITTDY 354
>gi|365961048|ref|YP_004942615.1| acyl-CoA dehydrogenase domain protein [Flavobacterium columnare
ATCC 49512]
gi|365737729|gb|AEW86822.1| acyl-CoA dehydrogenase domain protein [Flavobacterium columnare
ATCC 49512]
Length = 392
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYYQ DDLLT E + VR R ++KEI+PI+ EY ++AEFP +I LG + G
Sbjct: 8 SPDYYQLDDLLTEEHKLVRDAARTWVKKEISPIIEEYAQRAEFPTQIIKGLGEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I GSEEQ+QKYLP L
Sbjct: 68 IPAEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGSEEQRQKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T + ++L G K WI N+ FA + V++A+N
Sbjct: 128 ATGEWMGCFGLTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNAPFAQIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LPG +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPGKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATSAQISMAKRNNVDMALTIARDARQMLGGMGITGEYSIMRHMM 362
>gi|373457933|ref|ZP_09549700.1| acyl-CoA dehydrogenase domain-containing protein [Caldithrix abyssi
DSM 13497]
gi|371719597|gb|EHO41368.1| acyl-CoA dehydrogenase domain-containing protein [Caldithrix abyssi
DSM 13497]
Length = 387
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 188/348 (54%), Gaps = 3/348 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD+ + L+ EE+ + +R ++++ PI+ EY + EFPF ++P+L L + G TI
Sbjct: 5 SDFLGVFEQLSEEERMIMESLRAFVDEQYLPIIREYHARGEFPFEMVPQLAELGLFGITI 64
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S +A+ E+ R D+ + V +SL M I GSEEQKQK+LP LA
Sbjct: 65 PEEYGGAGLSYFIYGLAMQELERGDSGLRSLASVQNSLVMFPIFKYGSEEQKQKWLPLLA 124
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + T A KV GGW L G K WI N T ADV V++A+ T+
Sbjct: 125 SGQKIGCFGLTEPDHGSDPGGMETRAEKVSGGWRLNGSKMWITNGTVADVAVVWAK--TS 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++G+LV+K G KI K LR G+++ + +P+E+RLP + L
Sbjct: 183 EGVSGFLVEKGTKGFIQNKIHGKFSLRASDTGELVFEDCEIPEENRLPQARGLRAPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG +M Y+ Y R QF P+A FQ+ Q KLV+M+ I +L+
Sbjct: 243 NEARYGIAWGAIGAAMACYEEARDYALTRTQFSKPIAGFQLVQHKLVEMISEITKGLLLN 302
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+L ++ + G H S+ K +A + R +L NGI+ ++
Sbjct: 303 LQLGRMKDAGKAKHYHISMAKRNNVHQALQIARSARSILAANGIIDEY 350
>gi|383453335|ref|YP_005367324.1| acyl-CoA dehydrogenase, short-chain specific [Corallococcus
coralloides DSM 2259]
gi|380732180|gb|AFE08182.1| acyl-CoA dehydrogenase, short-chain specific [Corallococcus
coralloides DSM 2259]
Length = 393
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 184/350 (52%), Gaps = 3/350 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ DDLL++EE+A R V ++ E+ PI+ +++ FP H+IP L L V G +
Sbjct: 7 TDLFRIDDLLSAEEKAARDAVARFVDTEVLPIIGKHFRDGTFPAHLIPGLAELGVLGANL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + + + E+ R D+ +F V SL M I GSEEQK ++LP +A+
Sbjct: 67 QGYGCAGMNTVSYGLVLQELERGDSGLRSFASVQGSLCMFPIHAFGSEEQKTRFLPGMAK 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTT 223
I C+ LTEP +GS+ + A K W+L G K WI N + ADV V++A+ +
Sbjct: 127 GQLIGCFGLTEPDFGSNPGGMRARARKDGDSWVLNGTKAWITNGSIADVAVVWAKTDDGG 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G+LV+K PG + +I K LR + ++ + V VPD + LPGV +
Sbjct: 187 PESVRGFLVEKGMPGFSAREIPGKFSLRASRTSELSFQDVRVPDRNVLPGVVGLRGPLSC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +A+ G ++ ++ Y R QF G +A +Q+ Q+KL ML I L
Sbjct: 247 LNNARAGIAFAVTGAAIACFEGAREYALSRTQFDGKSIAGYQLTQEKLADMLQEIVKAQL 306
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ RL +L ++G P SL K A + + R + G NGI D+
Sbjct: 307 LSLRLARLKDEGKSNPVMVSLAKRNNVKSALDIARVARSIYGANGITDDY 356
>gi|120434501|ref|YP_860198.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
gi|117576651|emb|CAL65120.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
Length = 391
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D LLT E + VR RE +++E++PI+ E +KAEFP +I L + G
Sbjct: 8 APDYYNIDALLTDEHKMVRDATREFVKREVSPIIEEAAQKAEFPKQLINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQK+K+LP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGIRSTASVQSSLVMYPIFKYGTEEQKKKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T ++L G K WI NS FAD+ V++A+N
Sbjct: 128 ASGEMIGCFGLTEPDHGSNPGGMTTNFKDNGDHYLLNGAKMWISNSPFADIAVVWAKNED 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ +P +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENLMPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER+QFG P+A+ Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKEREQFGVPIASKQLQQKKLAEMITEITKAQLM 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AWRLGTLRNEGKATSAQISMAKRNNVEMAIKIAREARQVLGGMGISGEYSIMRHMM 362
>gi|390944556|ref|YP_006408317.1| acyl-CoA dehydrogenase [Belliella baltica DSM 15883]
gi|390417984|gb|AFL85562.1| acyl-CoA dehydrogenase [Belliella baltica DSM 15883]
Length = 402
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+YQ DDLLT E + +R VR+ ++KEI+P + ++ + A FP+ ++ K G + G I
Sbjct: 20 DFYQIDDLLTEEHKLIRSSVRDFVKKEISPYIEDWAQNAHFPYEIVKKFGDVGAFGPQIP 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + EI R D+ + V SL M I GSEEQK+K+LP LA
Sbjct: 80 TEYGGGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQKRKFLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI NS ADV V++A+N
Sbjct: 140 GEMLGCFGLTEPDHGSNPSGMTTNFKDMGDHYLLNGAKMWISNSPKADVAVVWAKNEE-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + NK LR G+++ V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFSTPETHNKWSLRASCTGELVFDNVKVPKENLLPGKSGLGAPMMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY ER QF P+ +FQ+ Q+KL +ML I L+ W
Sbjct: 259 SARYGIAWGTLGAAMDCYDSARRYALERIQFDKPIGSFQLIQKKLAEMLSEITKAQLLVW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL K+ ++G T SL K A A + R++ GG GI ++ + + +M
Sbjct: 319 RLGKMMDEGKATTAQISLAKRNNVAMALDIAREARQIHGGMGITGEYSLMRHMM 372
>gi|326436363|gb|EGD81933.1| glutaryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
Length = 420
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 193/363 (53%), Gaps = 3/363 (0%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A+ S P D DD LTS+E+ R R ++++ P + +++ F ++ +
Sbjct: 25 ASAKSVLPMDWQDALNLDDQLTSDEKMARDMARSYCKEKLLPRVVSAYQEERFDREIMNE 84
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+G L + G TI GYGC S + E+ R+D++ + + V SSL M I G+E
Sbjct: 85 MGELGMLGSTIDGYGCAAMSYVAYGLLAREVERIDSAYRSAMSVQSSLVMFPINEFGTEA 144
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
K+KYLP LA + + LTEP +GSD + + T TKV+GG++L G K WI NS ADV
Sbjct: 145 HKEKYLPRLATGEIVGAFGLTEPNHGSDPAGMETKLTKVDGGFLLNGTKTWITNSPVADV 204
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A+ +I G ++++ GL KIE K+ LR G I+++ VFVP+E+ P V
Sbjct: 205 FVVWAK--LDGKIRGVILERGMAGLETPKIEGKLSLRASVTGQIVMEDVFVPEENMFPEV 262
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L +R +AW +G + +M Y +RKQFG PLAA Q+ Q K+ ML
Sbjct: 263 TGLKGPFSCLNNARYGIAWGALGAAESCLEMAREYTLDRKQFGRPLAANQLMQLKMANML 322
Query: 335 GNIQAMILVGWRLCKL-YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
I + R+ +L E+G P SL K +A + + R++LGGNGI D+
Sbjct: 323 TEISIGLQACLRVGRLKQERGVFAPDQVSLIKRNSCGKALDIARVARDMLGGNGISGDYH 382
Query: 394 VAK 396
+ +
Sbjct: 383 IIR 385
>gi|291295217|ref|YP_003506615.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
DSM 1279]
gi|290470176|gb|ADD27595.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
Length = 397
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 186/348 (53%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+YQ +LLT EE+ ++ R+ +E E P +AE+WE AEFP H+I K G + G TI
Sbjct: 3 DFYQVAELLTPEEREIQKAARKFLEAEALPHIAEWWESAEFPVHLIRKFGEMGFLGTTIP 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ R+D+ +F V SSL M I GSEEQK++YLP LA
Sbjct: 63 TEYGGMGASSAAYGVIGYELERIDSGLRSFCSVQSSLVMYPIWAYGSEEQKREYLPKLAT 122
Query: 166 LNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTE GSD A + T A + G ++L G K WI N A + +I+A++
Sbjct: 123 GEYVGCFGLTEADGGSDPDANMKTRARRDGGDYVLNGSKMWITNGNLAHIAIIWAKDDE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D G KI++K LR +++L+ V VP LPGV + L
Sbjct: 182 GVVRGFIVPTDTKGFRANKIQHKASLRASVTSELVLEDVRVPASAMLPGVKGLKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + + R FGAP+A+ Q+ Q+KLV+M + +L+
Sbjct: 242 TQARFGIAWGALGALEAVYTEALEFARSRSTFGAPIASRQLVQEKLVRMAADHTKGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L + G + P SLGK A RE+LGG+GI ++
Sbjct: 302 WRLAQLKDAGTLKPAQVSLGKRDNVRAALNGARAAREILGGSGITLEY 349
>gi|384564821|ref|ZP_10011925.1| acyl-CoA dehydrogenase [Saccharomonospora glauca K62]
gi|384520675|gb|EIE97870.1| acyl-CoA dehydrogenase [Saccharomonospora glauca K62]
Length = 394
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 187/352 (53%), Gaps = 3/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGT 104
SD+ D LT++E+ +R VR + E++P +A+++E A P + K G L V G
Sbjct: 9 SDFLGIDAELTADERDIRDTVRRFAKAELSPHVADWYENATLPVRDLAKSFGRLGVLGMH 68
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ GYGC G S IA E+ VD+ +F+ V SLAM I GSEEQKQ++LP+LA
Sbjct: 69 LTGYGCAGSSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRYGSEEQKQRWLPALA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD +++ T A + W+L+G K WI N T ADV V++AR T
Sbjct: 129 SGEAIGCFGLTEPDAGSDPASMRTRARRDGSDWVLDGTKMWITNGTVADVAVVWAR--TD 186
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG + +I K+ LR +++L V +P + LPGV + L
Sbjct: 187 EGVRGFVVPTDTPGFSAHEITRKLSLRASVTAELVLDGVRLPSDAALPGVTGLRGPLSCL 246
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + + +G + Y+ Y R QFG PLAA+Q+ Q+KL ++ + LV
Sbjct: 247 NEARFGIVFGVVGAARTCYETALEYTTTRTQFGQPLAAYQLTQRKLADLVVEVNRAGLVA 306
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + G + S GK A + R +LG NGI ++ V +
Sbjct: 307 LRLGRLKDAGTLHHSQVSFGKLANVRAALDVARTARSMLGANGISLEYPVMR 358
>gi|327403341|ref|YP_004344179.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
gi|327318849|gb|AEA43341.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
Length = 396
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 190/347 (54%), Gaps = 2/347 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DY D+LLT E++ VR R ++KE++PI+ E++EKA FP H++ LG + G I
Sbjct: 10 DYLLMDELLTDEQKLVRDAARAWVKKEVSPIIDEHYEKATFPMHLLKGLGEIGAFGPYIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ R D+ + V SSL M I G+EEQKQKYLP LA
Sbjct: 70 EEYGGPGLDQISYGLIMQELERCDSGLRSTASVQSSLVMYPIWKYGTEEQKQKYLPKLAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD ++ T + ++L G K WI N+ FAD+ V++A++ T
Sbjct: 130 GEMMGCFGLTEPDHGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKDET-G 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + ++ K+ LR G+++ V VP E+ LPG + L
Sbjct: 189 RIHGLVVERGMEGFSTPEMHGKLSLRASSTGELIFVNVKVPKENLLPGRSGLGAPLSCLD 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY KER QFG P+ AFQ+ Q+KL +M+ I +
Sbjct: 249 SARFGIAWGALGAAMDCYDQALRYSKERTQFGVPIGAFQLTQKKLAEMITEITKAQFITL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
R+ +L +G T S+ K A R++ GG GI S++
Sbjct: 309 RVGELRNEGRATSSMISMIKRNNVEIALNIAREARQIHGGMGITSEY 355
>gi|399031226|ref|ZP_10731322.1| acyl-CoA dehydrogenase [Flavobacterium sp. CF136]
gi|398070493|gb|EJL61790.1| acyl-CoA dehydrogenase [Flavobacterium sp. CF136]
Length = 392
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR R +++E++PI+ E+ +KAEFP +I LG + G
Sbjct: 8 APDYYNLDDLLTDEHKLVRESARAWVKREVSPIIEEFAQKAEFPKQIIKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GSD ++ T + ++L G K WI N+ FAD+ V++A++ T
Sbjct: 128 ATGEFMGCFGLTEPDHGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKDET 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMQGFTTPETHNKWSLRASSTGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGKATTAQISMAKRNNVDMAIHIAREARQMLGGMGITGEYSIMRHMM 362
>gi|418246487|ref|ZP_12872882.1| glutaryl-CoA dehydrogenase [Corynebacterium glutamicum ATCC 14067]
gi|354509439|gb|EHE82373.1| glutaryl-CoA dehydrogenase [Corynebacterium glutamicum ATCC 14067]
Length = 398
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 201/362 (55%), Gaps = 19/362 (5%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG--------A 97
SD + F ++LT E+AV ++ R +E+E+ P + E W+KA FP ++ L A
Sbjct: 12 SDLFGFAEVLTEAERAVLLETRRVLEEEVKPYINEAWDKAVFPDEIVQPLQDLQLLDPPA 71
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
LR AG +++ TG E+AR D + T+ + L + GS EQ Q
Sbjct: 72 LREAGESVRDI------FTG--FRNFELARCDINVGTYYNASAGLFRTACMVGGSPEQAQ 123
Query: 158 KYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKV--EGGWILEGQKRWIGNSTFADV 214
+ + +ALTEP +GSD A L TTATK G WI+ G+KRWIG ++ AD+
Sbjct: 124 RLDAQIKSGEVKGVFALTEPDHGSDIAGGLATTATKDADTGEWIINGEKRWIGGASTADL 183
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+ FAR+T NQ+ +LV A G+++ I+ K LRI+QN I V V ++ RL +
Sbjct: 184 IATFARDTADNQVKCFLVAPKAEGVSMEIIDRKASLRIMQNAHITYNNVRVSEDARLHNI 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
NSF+D S+ L R VAW +G G Y+ +Y++ R+QFG P+A FQ+ Q+KL ML
Sbjct: 244 NSFKDVSECLRRMRSDVAWMAVGAQAGAYEAAVKYVRSREQFGRPIAGFQLIQEKLALML 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN+ A + + +L + + G +++L K + + + RET + RE+ GGNGI+ D V
Sbjct: 304 GNLTASLGMMVKLTEQQQAGIFKEENSALAKMFTSLKLRETTSWAREICGGNGIILDNDV 363
Query: 395 AK 396
A+
Sbjct: 364 AR 365
>gi|408371419|ref|ZP_11169185.1| glutaryl-CoA dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743127|gb|EKF54708.1| glutaryl-CoA dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 392
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + +R R+ ++KE++PI+ +Y + AEFP H++ L L G
Sbjct: 8 APDYYNMDDLLSEEHKLIRQATRDWVKKEVSPIIEQYAQNAEFPKHLLQGLAELGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSE+Q++K+LP L
Sbjct: 68 IPQEYGGAGLDQISYGLIMQEIERGDSGIRSTASVQSSLVMYPIWKYGSEQQRKKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
+ I C+ LTEP +GS+ + T T ++L G K WI N+ FAD+ V++A++
Sbjct: 128 SSGELIGCFGLTEPNHGSNPGGMETKFTDAGDHYLLNGAKLWISNAPFADLAVVWAKDEN 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G LV++ G + + NK LR G+++ V VP E+ LPG N
Sbjct: 188 -GRIHGLLVERYMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPGKNGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L + + S+ K A + R++LG GI DF + + +M
Sbjct: 307 TLRLGQLKNEDRASSSQISMAKRNNVQMASDIAREARQILGAMGITGDFSIMRHMM 362
>gi|407975534|ref|ZP_11156439.1| acyl-CoA dehydrogenase domain-containing protein [Nitratireductor
indicus C115]
gi|407429162|gb|EKF41841.1| acyl-CoA dehydrogenase domain-containing protein [Nitratireductor
indicus C115]
Length = 390
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 194/353 (54%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ +DLLT EE +R R + ++ P + E F V+ ++ L G TI+
Sbjct: 10 DPFRIEDLLTQEEIMIRDTARSYAQDKLMPRILESNRNETFDIEVMREIADLGFLGATIE 69
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
G+GC G S + E RVD S + + V S+L+ML I L GS+EQ++++LP++A+
Sbjct: 70 GFGCAGISYVAYGLIAREFERVDTSFRSALGVQSTLSMLPIYLYGSQEQRERFLPAMARA 129
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GSD +++ A KV+GG+ L G K WI ++ AD+++++A++
Sbjct: 130 EMLGCFGLTEPDHGSDPGGMHSRARKVDGGYRLTGNKTWITHAPIADIMIVWAKD-DEGT 188
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+++++ GL +KIE K +R G I + VFVPDE+ LPG L
Sbjct: 189 VRGFILERGMEGLGTSKIEGKFSVRASPTGQIHMDNVFVPDENLLPGAKGIGAPFGCLNN 248
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +L
Sbjct: 249 ARFGICWGAVGAAEFCWQTSRQYAMDRKQFGKPLAANQLVQKKLADMQTEITLALLSCIH 308
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L +L ++G +P SL K +A E + R++ GGNGI ++ V + +M
Sbjct: 309 LSRLRDEGKASPEMVSLLKRNNAGKALEITRMARDIHGGNGISDEYHVIRHLM 361
>gi|409124263|ref|ZP_11223658.1| glutaryl-CoA dehydrogenase [Gillisia sp. CBA3202]
Length = 392
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR RE ++++++PI+ E ++A+FP +I L + G
Sbjct: 8 APDYYNLDDLLTEEHKMVRDAAREWVKRDVSPIIEEAAQEAKFPKSIIKGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQK+KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFKYGSEEQKKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI NS FAD+ V++A+N
Sbjct: 128 ASGEFMGCFGLTEPDHGSNPGGMVTNFKDKGDHYLLNGAKLWISNSPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V +P E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKIPKENLLPNKSGLGGPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A + R++LG GI D+ + + +M
Sbjct: 307 AWRLGVLRNEGKATSAQISMAKRNNVDMALKIAREARQVLGAMGITGDYSIMRHMM 362
>gi|254482196|ref|ZP_05095437.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
proteobacterium HTCC2148]
gi|214037521|gb|EEB78187.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
proteobacterium HTCC2148]
Length = 393
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 192/350 (54%), Gaps = 1/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT E++ V+ R+ ++++ P + + + E + ++G L + G TI+
Sbjct: 13 DPFLLDQQLTDEQRMVQQSARQYAQEKLLPRVRDAFRAEETDLSIFREMGELGLLGSTIE 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + E+ RVD+ + + V SSL M I G+E Q++KYLP LA
Sbjct: 73 GYGCPGVDYISYGLVAREVERVDSGYRSMMSVQSSLVMYPIDAYGNESQREKYLPKLATG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD ++ T A V+GG+ + G K WI NS FADV V++A+ T ++
Sbjct: 133 EWIGCFGLTEPDHGSDPGSMVTRARSVDGGYSVSGAKMWITNSPFADVFVVWAK-TDDDK 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GL+ KIE K+ LR G+I++ +VFVP+E+ LP V + L
Sbjct: 192 IRGFILEKGMDGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVEGLKGPFGCLNN 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + +Y ERKQFG PLA+ Q+ Q KL M I + R
Sbjct: 252 ARYGIAWGSLGAAETCWHAARQYTMERKQFGVPLASKQLVQLKLADMQTEISLALQGCLR 311
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L + G + P SL K ++ R++LGGNGI ++ + +
Sbjct: 312 AGQLMDAGDIAPELISLIKRNSCGKSLAIARTARDMLGGNGISDEYPIMR 361
>gi|145294419|ref|YP_001137240.1| hypothetical protein cgR_0374 [Corynebacterium glutamicum R]
gi|417970551|ref|ZP_12611483.1| glutaryl-CoA dehydrogenase [Corynebacterium glutamicum S9114]
gi|140844339|dbj|BAF53338.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045210|gb|EGV40883.1| glutaryl-CoA dehydrogenase [Corynebacterium glutamicum S9114]
Length = 398
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 201/362 (55%), Gaps = 19/362 (5%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG--------A 97
SD + F ++LT E+AV ++ R +E+E+ P + E W+KA FP ++ L A
Sbjct: 12 SDLFGFAEVLTEAERAVLLETRRVLEEEVKPYINEAWDKAVFPNAIMQPLQDLQLLDPPA 71
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
LR AG +++ TG E+AR D + T+ + L + GS EQ Q
Sbjct: 72 LREAGESVRDI------FTG--FRNFELARCDINVGTYYNASAGLFRTACMVGGSPEQAQ 123
Query: 158 KYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKV--EGGWILEGQKRWIGNSTFADV 214
+ + +ALTEP +GSD A L TTATK G WI+ G+KRWIG ++ AD+
Sbjct: 124 RLDAQIKSGEVKGVFALTEPDHGSDIAGGLATTATKDADTGEWIINGEKRWIGGASTADL 183
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+ FAR+T NQ+ +LV A G+++ I+ K LRI+QN I V V ++ RL +
Sbjct: 184 IATFARDTADNQVKCFLVAPQAEGVSMEIIDRKASLRIMQNAHITYNNVRVSEDARLHNI 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
NSF+D S+ L R VAW +G G Y+ +Y++ R+QFG P+A FQ+ Q+KL ML
Sbjct: 244 NSFKDVSECLRRMRSDVAWMAVGAQAGAYEAAVKYVRSREQFGRPIAGFQLIQEKLALML 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN+ A + + +L + + G +++L K + + + RET + RE+ GGNGI+ D V
Sbjct: 304 GNLTASLGMMVKLTEQQQAGIFKEENSALAKMFTSLKLRETASWAREICGGNGIILDNDV 363
Query: 395 AK 396
A+
Sbjct: 364 AR 365
>gi|347535294|ref|YP_004842719.1| glutaryl-CoA dehydrogenase [Flavobacterium branchiophilum FL-15]
gi|345528452|emb|CCB68482.1| Glutaryl-CoA dehydrogenase [Flavobacterium branchiophilum FL-15]
Length = 392
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYYQ DDLLT E + VR R ++K ++PI+ +Y +KA FP +I LG + G
Sbjct: 8 APDYYQLDDLLTDEHKLVREAARAWVKKAVSPIIEDYAQKAAFPTEIIKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+E Q+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEAQRMKYLPQL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + C+ LTEP YGSD ++ T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGDMMGCFGLTEPNYGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASSTGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A A R++LGG GI ++ + + M
Sbjct: 307 TWRLGVLRNEGKATTAQISMAKRNNVAMAIHIAREARQILGGMGITGEYSIMRHSM 362
>gi|424841304|ref|ZP_18265929.1| acyl-CoA dehydrogenase [Saprospira grandis DSM 2844]
gi|395319502|gb|EJF52423.1| acyl-CoA dehydrogenase [Saprospira grandis DSM 2844]
Length = 405
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
DYY +DLLT E++ R VRE + EI+PI+ + +E+A +P H+I L L G +
Sbjct: 21 GQDYYMINDLLTDEQKIARDAVREFVRGEISPIIEDCYERAIYPRHLIKGLAELGAFGPS 80
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGC G T + + E+ R D+ + V SL M I GSEEQ+ KYLP L
Sbjct: 81 LPEKYGCAGTDETTYGLMMQELERGDSGIRSAASVQGSLVMYPIYRFGSEEQRMKYLPKL 140
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + + T + +IL G K WI NS ADV V++A++
Sbjct: 141 AAGEFIGCFGLTEPDHGSNPAGMITNIKEDGDHYILNGAKMWITNSPIADVAVVWAKDEE 200
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G +V D PG++ +I K+ LR G+++ + +P + LP V +
Sbjct: 201 -GVIRGLIVDMDTPGVSAPEIHGKLSLRASITGELVFEDARIPKANLLPNVKGLKGPLSC 259
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M Y+ RY ER+QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 260 LTKARYGIAWGALGAAMDCYESALRYSLEREQFGKPIAGFQLTQKKLAEMITEITKAQLL 319
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + G T S+ K A A + R++ GG GI +++ + +M
Sbjct: 320 LWRLGGLMDAGKATSAQVSMAKRNNVAMALDIAREARQIHGGMGITNEYPCMRHMM 375
>gi|378550367|ref|ZP_09825583.1| hypothetical protein CCH26_09775 [Citricoccus sp. CH26A]
Length = 400
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 189/350 (54%), Gaps = 8/350 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D FD LLT+EE A R +VR ++ E+ P +A ++ A FP ++P++ L + G +
Sbjct: 19 ADLIDFDSLLTAEEIATRDRVRAFVDAEVKPNIASWYADAVFPLEIVPEMAKLGLLGMHL 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGCPG S +A AE+ D+ TF+ V SLAM I GSEEQKQ++LP++A
Sbjct: 79 SGYGCPGSSAVEYGLAGAELEAGDSGLRTFVSVQGSLAMSAIYKHGSEEQKQQWLPAMAA 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD SA+ T A + W+L G KRWIG + A V VI+ + T
Sbjct: 139 GEAIGCFGLTEPTAGSDPSAMKTFARRDGEDWVLNGTKRWIGLANVAQVAVIWVQ--TDE 196
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V PG + T IE K+ +R +I L V +P + LPGV + L
Sbjct: 197 GIRGFVVPTSTPGYSATPIEPKLSMRASIQCEIELTDVRLPADAVLPGVVGLKGPFSCLN 256
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + +++ Y ++R QF PLA +Q+ QQKLV M I L+
Sbjct: 257 EARYGIIWGAMGAARDAFEVALAYSQQRLQFDKPLAGYQLTQQKLVDMALEINKGFLLAL 316
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
+ + + G + S+GK RE + + RE +LGGNGI ++
Sbjct: 317 HIGRRKDAGTLKLHEISVGK---LNNCREAIEIAREARTILGGNGITLEY 363
>gi|149921726|ref|ZP_01910174.1| probable glutaryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
gi|149817464|gb|EDM76936.1| probable glutaryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
Length = 397
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 190/352 (53%), Gaps = 6/352 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
D LLT +E+ + + + P++ +++E FP +IP+ + G +++GY C
Sbjct: 13 IDHLLTEDERLTWKAAHDFCQSRVMPVIEKHYEAGTFPKELIPEFAEMGFLGCSLEGYDC 72
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G + + E+ RVD+ +F V ++LAM I G+EEQKQK+LP +A I
Sbjct: 73 AGLNPVAYGTIMLELERVDSGIRSFCSVQTALAMYPIWAYGTEEQKQKWLPGMAHGELIG 132
Query: 171 CWALTEPAYGSDASALNTTATK-VEGG-WILEGQKRWIGNSTFADVLVIFAR----NTTT 224
C+ LTEP GSD ++ T A + EGG +IL GQK WI NS +++ V++A+ +
Sbjct: 133 CFGLTEPNSGSDPGSMRTHAKQESEGGDYILNGQKMWITNSPISNLCVVWAKTLDFGSDA 192
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++V++ GL+ + K+ LR G+I+L V VP E+ LPGV + L
Sbjct: 193 PVIRGFVVERGMKGLSTPETHGKLSLRASITGEIVLDDVRVPKENMLPGVRGLKGPLSCL 252
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G +M VY+ RY ER QFG P+A FQ+ QQKLV+M I +L+
Sbjct: 253 TQARYGIGWGGVGAAMDVYERARRYTLERVQFGKPIAGFQLTQQKLVEMHNAIGKGLLLA 312
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L ++G + P S K ARE R +LGGNGI+ +F + +
Sbjct: 313 HHCGRLKQEGKLDPVQVSFIKRDNIQLARECAKTARTMLGGNGIMGEFHIMR 364
>gi|19551538|ref|NP_599540.1| acyl-CoA dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|62389185|ref|YP_224587.1| glutaryl-CoA dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|21323052|dbj|BAB97681.1| Acyl-CoA dehydrogenases [Corynebacterium glutamicum ATCC 13032]
gi|41324518|emb|CAF18858.1| GLUTARYL-COA DEHYDROGENASE [Corynebacterium glutamicum ATCC 13032]
gi|385142465|emb|CCH23504.1| acyl-CoA dehydrogenase [Corynebacterium glutamicum K051]
Length = 398
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 199/362 (54%), Gaps = 19/362 (5%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG--------A 97
SD + F ++LT E+AV ++ R +E+E+ P + E W+KA FP ++ L A
Sbjct: 12 SDLFGFAEVLTEAERAVLLETRRVLEEEVKPYINEAWDKAVFPDEIVQPLQDLQLLDPPA 71
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
LR AG +++ TG E+AR D + T+ + L + GS EQ Q
Sbjct: 72 LREAGESVRDI------FTG--FRNFELARCDINVGTYYNASAGLFRTACMVGGSPEQAQ 123
Query: 158 KYLPSLAQLNTIACWALTEPAYGSD-ASALNTTATKV--EGGWILEGQKRWIGNSTFADV 214
+ + +ALTEP +GSD A L TTATK G WI+ G+KRWIG ++ AD+
Sbjct: 124 RLDAQIKSGEVKGVFALTEPDHGSDIAGGLATTATKDADTGEWIINGEKRWIGGASTADL 183
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+ FAR+T NQ+ +LV A G+++ I+ K LRI+QN I V V + RL +
Sbjct: 184 IATFARDTADNQVKCFLVAPQAEGVSMEIIDRKASLRIMQNAHITYNNVRVSGDARLHNI 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
NSF+D S+ L R VAW +G G Y+ +Y++ R+QFG P+A FQ+ Q+KL ML
Sbjct: 244 NSFKDVSECLRRMRSDVAWMAVGAQAGAYEAAVKYVRSREQFGRPIAGFQLIQEKLALML 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN+ A + + +L + G +++L K + + + RET + RE+ GGNGI+ D V
Sbjct: 304 GNLTASLGMMVKLTDQQQAGIFKEENSALAKMFTSLKLRETASWAREICGGNGIILDNDV 363
Query: 395 AK 396
A+
Sbjct: 364 AR 365
>gi|448727015|ref|ZP_21709393.1| acyl-CoA dehydrogenase [Halococcus morrhuae DSM 1307]
gi|445792384|gb|EMA42990.1| acyl-CoA dehydrogenase [Halococcus morrhuae DSM 1307]
Length = 391
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 6/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ +AP + ++E FP +I ++G L +
Sbjct: 3 DYVGLEADLDQEERMIRDTAREFVDENVAPDIGTHFENGTFPEELITEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG PG S + + E+ D+ + V +L M I GS+EQK+++LP LA
Sbjct: 63 GYGLPGVSEKAYGLLMQELEAGDSGIRSMASVQGALVMYPIHAFGSDEQKERWLPDLASG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEG----GWILEGQKRWIGNSTFADVLVIFARNT 222
+ C+ LTEP +GS+ + + T A + G ++L G K WI NS ADV V++AR+T
Sbjct: 123 EKVGCFGLTEPEHGSNPAGMETRAERASGHAGDEYVLSGSKTWITNSPIADVAVVWARDT 182
Query: 223 TT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ + + G+LV+ D G++ +I+ K+ +R G+I L V VP+ LPGV +
Sbjct: 183 SAEGSPVRGFLVETDKDGVSTNEIDEKLSMRASITGEIGLSNVRVPESAVLPGVEGMKGP 242
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + W +G + ++ Y +R+QF P+A+FQ+ Q KL +M I
Sbjct: 243 LSCLTQARYGITWGAVGAARDCFETARDYATDREQFDKPIASFQLQQGKLAEMATEITTA 302
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ RL L E+G + P S+ K + AR+ + RE+LGGNGI +D+
Sbjct: 303 QLLSHRLADLKERGDLRPQQVSMAKYNNVSMARDQARVAREMLGGNGITTDY 354
>gi|424863266|ref|ZP_18287179.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86A]
gi|400757887|gb|EJP72098.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86A]
Length = 385
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 190/353 (53%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D F+D L+ EE + RE ++E+ P + + F + ++G+L G IK
Sbjct: 5 DILLFNDQLSEEELIIHRSAREYCQQELLPRIVDANRNETFDIGIYKEMGSLGFLGAPIK 64
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + + EI RVD+S + V +SLAM I GSEEQK YLP +A+
Sbjct: 65 GYGCAGTNYVSYGLIAREIERVDSSYRSAFSVQTSLAMHAIYEFGSEEQKDFYLPVMAKG 124
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ + C+ LTE GSD +++ T A + +GG++L G K WI NS ADVL+I+A++
Sbjct: 125 DKLGCFGLTEADAGSDPASMKTKAIEKDGGYVLNGSKNWITNSPIADVLIIWAKD-EQEI 183
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++V +D+ GL+ KI+ K LR G I L+ VFVP + LP V SF+ L +
Sbjct: 184 LRGFIVDRDSKGLSTPKIDGKFALRASTTGQIFLEDVFVPKDKMLPNVQSFRGPFSCLNM 243
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + ++ Y ER QFG PLAA Q+ Q+KL M I + R
Sbjct: 244 ARYGIAWGAMGAAEFCWEASLNYSLERVQFGKPLAAKQLVQKKLADMQTEITIGLQSVLR 303
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L +L + M P SL K +A + + R++ GGNGI ++ V + M
Sbjct: 304 LGRLIDDNKMKPEMISLLKRNNCQKALDIARVARDIHGGNGISDEYHVIRHCM 356
>gi|395802846|ref|ZP_10482098.1| glutaryl-CoA dehydrogenase [Flavobacterium sp. F52]
gi|395435287|gb|EJG01229.1| glutaryl-CoA dehydrogenase [Flavobacterium sp. F52]
Length = 392
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DY+ DDLL+ E + VR R ++KE++PI+ EY +KAEFP +I LG + G
Sbjct: 8 SPDYFNLDDLLSDEHKLVRESARAWVKKEVSPIIEEYAQKAEFPKQIIKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GSD ++ T + ++L G K WI N+ FAD+ +++A+N
Sbjct: 128 ATGEYIGCFGLTEPDHGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAIVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATSAQISMAKRNNVNMAITIAREARQMLGGMGITGEYSIMRHMM 362
>gi|381164722|ref|ZP_09873952.1| acyl-CoA dehydrogenase [Saccharomonospora azurea NA-128]
gi|418462731|ref|ZP_13033773.1| glutaryl-CoA dehydrogenase [Saccharomonospora azurea SZMC 14600]
gi|359735937|gb|EHK84889.1| glutaryl-CoA dehydrogenase [Saccharomonospora azurea SZMC 14600]
gi|379256627|gb|EHY90553.1| acyl-CoA dehydrogenase [Saccharomonospora azurea NA-128]
Length = 392
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 185/351 (52%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D+ D LT +E+ +R VR+ E E+ P +AE++E A P + K G L V G +
Sbjct: 8 DFLGVDAELTVDERDIRDAVRQFAEVELTPHVAEWYENATLPARDLAKAFGRLGVLGMHL 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S IA E+ VD+ +F+ V SLAM I GSEEQKQ++LP LA
Sbjct: 68 SGYGCAGSSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRYGSEEQKQRWLPPLAS 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD +++ T A + W+L+G K WI N T ADV V++A+ T
Sbjct: 128 GEAIGCFGLTEPDAGSDPASMRTRARRDGTDWVLDGTKMWITNGTVADVAVVWAQ--TDE 185
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G++V DAPG + +I K+ LR +++ V +P + LPGV + L
Sbjct: 186 GVRGFVVPTDAPGFSAHEITRKLSLRASLTAELVFDGVRLPSDAVLPGVTGLRGPLSCLN 245
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + Y+ Y R QFGAPLAA+Q+ Q+KL ++ + LV
Sbjct: 246 EARFGIVFGAVGAARTCYETALEYTTTRTQFGAPLAAYQLTQRKLADLVVEVNRAGLVAL 305
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + G + S GK A + R +LG NGI ++ V +
Sbjct: 306 RLGRLKDAGELHHSQVSFGKLANVRAALDVARTARSMLGANGISLEYPVMR 356
>gi|374599575|ref|ZP_09672577.1| acyl-CoA dehydrogenase domain-containing protein [Myroides odoratus
DSM 2801]
gi|423324724|ref|ZP_17302565.1| hypothetical protein HMPREF9716_01922 [Myroides odoratimimus CIP
103059]
gi|373911045|gb|EHQ42894.1| acyl-CoA dehydrogenase domain-containing protein [Myroides odoratus
DSM 2801]
gi|404607981|gb|EKB07472.1| hypothetical protein HMPREF9716_01922 [Myroides odoratimimus CIP
103059]
Length = 392
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R +++E++PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYLLDDLLTEEHKLIRDAARAWVKREVSPIIEEYAQKAEFPKQIISGLAEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRNKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ S + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEMIGCFGLTEPDHGSNPSGMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I ++
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQML 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A E R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATSAQISMAKRNNVNMALEIARDARQMLGGMGITGEYSIMRHMM 362
>gi|116619185|ref|YP_821341.1| acyl-CoA dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116222347|gb|ABJ81056.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 388
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 184/351 (52%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY+ D L EE VR R E+ I P++ + + A FP ++P + L G ++
Sbjct: 7 DYFCVDSLFNEEELMVRQTARRFAEERILPLIRDCYRDARFPTELVPAMAELGFLGANLE 66
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + + E+ R+D+ +F+ V +L M I GSEEQKQ++LP+L
Sbjct: 67 GYGCAGMSNVEYGLVMQELERIDSGVRSFVSVQGALVMYPIHRYGSEEQKQRWLPALQSG 126
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GS+ + + TTA + GW+L G+K WI N + +DV +++AR
Sbjct: 127 KAIGCFGLTEPDFGSNPAGMRTTARRDGDGWVLNGEKTWITNGSMSDVAIVWAR--AEEG 184
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+LV++ PG T + I K +R + L V D DRLPG + L+
Sbjct: 185 ILGFLVERGTPGYTTSDIHGKWSMRASVTSSLSLVDCRVKDADRLPGARGLKGPLSCLSQ 244
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G +M Y+ +Y RKQF P+A+ Q+ Q+KL M+ I L+
Sbjct: 245 ARYGIGWGVVGAAMDCYETARQYAILRKQFDDRPIASHQLVQEKLAWMITEITKAQLLAV 304
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L ++ + P H S+ K A E L R+LLG NGI ++ + +
Sbjct: 305 QAGRLKDQKKLEPAHISMLKRNNVWMALECARLSRDLLGANGITDEYPIMR 355
>gi|433459595|ref|ZP_20417369.1| putative glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes
BAB-32]
gi|432189460|gb|ELK46563.1| putative glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes
BAB-32]
Length = 386
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 185/349 (53%), Gaps = 8/349 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D F+ LLT EE+ ++ VR ++ I P +A ++E A FP ++P++ L + G +K
Sbjct: 6 DLISFESLLTEEERLLQKNVRSFVDTAIKPNIAGWYEDAVFPLEIVPEMAKLGLLGMHLK 65
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A AE+ D+ TF+ V SLAM I GSEEQK ++LP +A
Sbjct: 66 GYGCAGRSAVEYGLAGAELEAGDSGLRTFVSVQGSLAMSAIYKHGSEEQKNEWLPQMAAG 125
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP GSD S++ T A + WIL G KRWIG ++ A V VI+A+ T +
Sbjct: 126 EAIGCFGLTEPTAGSDPSSMKTFARRDGDDWILNGAKRWIGLASVAKVAVIWAQ--TDDG 183
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++V D G T IE K+ +R DI L V +P LP + + L
Sbjct: 184 VRGFVVPTDTAGFKATPIEPKLSMRASIQCDIELTDVRLPANAVLPHAKGLRGPFECLNE 243
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + W +G + + Y KER QF PLA +Q+ Q+KLV M I L+
Sbjct: 244 ARYGIIWGSMGAARDAWQTAVDYSKERLQFDKPLAGYQLTQEKLVNMALEINKGFLLALH 303
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L +L + G + P S+GK RE + + RE +LGGNGI D+
Sbjct: 304 LGRLKDAGQLQPHQISVGK---LNNCREAIEIARECRSILGGNGITLDY 349
>gi|392966380|ref|ZP_10331799.1| acyl-CoA dehydrogenase domain protein [Fibrisoma limi BUZ 3]
gi|387845444|emb|CCH53845.1| acyl-CoA dehydrogenase domain protein [Fibrisoma limi BUZ 3]
Length = 406
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 198/371 (53%), Gaps = 5/371 (1%)
Query: 33 PQATPASKFPPCA---SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF 89
PQ T + P + D+YQ DDLLT+E + VR +R +++EI+PI+ EY ++AEFP
Sbjct: 7 PQRTKSRGNGPDSFESPDFYQVDDLLTAEHKLVRSSMRTFVKREISPIIEEYAQRAEFPA 66
Query: 90 HVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIA 148
++PK G + G T+ YG + + EI R D+ + + V SSL M I
Sbjct: 67 QLVPKFGQIGAFGPTLPVEYGGGNLDYISYGLMMQEIERGDSGMRSTVSVQSSLVMYPIF 126
Query: 149 LCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208
GSEEQK+++LP LA+ I C+ LTE +GS+ + T + ++L G K WI +
Sbjct: 127 WYGSEEQKRRFLPQLAKGELIGCFGLTEANHGSNPGGMETGFIERSDYFLLNGSKMWITH 186
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
+ AD+ +++A+N +I G +V++ G + KIE K LR G+++ + V VP E
Sbjct: 187 APIADIAIVWAKNEQ-GKIRGLIVERGMEGFSTAKIEQKWSLRASATGELIFQDVKVPKE 245
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ LP + L +R +AW +G +M Y+ RY ER QF P+A++Q+ Q+
Sbjct: 246 NLLPEAFGLKSALSCLDQARYGIAWGALGAAMDCYETARRYALERIQFDKPIASYQLVQK 305
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
KL +ML +I L+ WRL L + T S+ K A R++LGG GI
Sbjct: 306 KLAEMLTDITLAQLLCWRLGTLKNEDKATSAQISMAKRNNVEVALRVAREARQVLGGMGI 365
Query: 389 LSDFLVAKVIM 399
D+ + + +M
Sbjct: 366 TGDYPIMRHLM 376
>gi|378549618|ref|ZP_09824834.1| hypothetical protein CCH26_06015 [Citricoccus sp. CH26A]
Length = 401
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 193/362 (53%), Gaps = 19/362 (5%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG--------A 97
SD Y F + LT E+ V +RE ++ + P++ + W+KAE P ++ + A
Sbjct: 15 SDLYGFAERLTEAERRVLTDLREQLQSTVYPLLNDAWDKAELPTELLEAVRGLDLMDPPA 74
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
LR AG ++ +TG E+AR D + T + L L GS EQ +
Sbjct: 75 LREAGEPVRDL------LTG--FRNFELARCDINVGTLYNAQAGLFRTVCTLGGSPEQSR 126
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASA---LNTTATKVEGGWILEGQKRWIGNSTFADV 214
+ + LTEP +GSD + T G W++ G KRWIG +T +DV
Sbjct: 127 DLDARIRTYELTGVFGLTEPDHGSDVAGGLATTATRDAATGEWVINGAKRWIGGATVSDV 186
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+ FAR+T Q+ +LV +DA G+T+T I NK LRI+QN I + V V + DRL G+
Sbjct: 187 VATFARDTADGQVKCFLVPRDAEGVTMTIIPNKASLRIMQNAHIEYRDVRVTEADRLHGI 246
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
NSF+D ++ L R VAW +G G Y+ RY++ R+QFG P+A FQ+ Q+KL ML
Sbjct: 247 NSFKDVARCLRNMRSDVAWMAVGAQAGAYEAALRYVRGREQFGRPIAGFQLVQEKLAIML 306
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
GN+ A + + +L + G +++L K + + R RETVAL RE+ GGNGI D V
Sbjct: 307 GNLTASLGMVVQLTEQQAAGVFKDENSALAKMYTSLRLRETVALAREVCGGNGITLDTDV 366
Query: 395 AK 396
A+
Sbjct: 367 AR 368
>gi|324997768|ref|ZP_08118880.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
sp. P1]
Length = 393
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 183/335 (54%), Gaps = 2/335 (0%)
Query: 58 EEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTG 117
EE+A R VR + + + P +A+++E+A P +IP+LG + G + G GCPG S
Sbjct: 19 EERAWREHVRGFVAERVTPHVADWFERAHLPRELIPELGRAGLLGAHLHGPGCPGRSAVE 78
Query: 118 AAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEP 177
+A AE+ D+ T + V SLAM I G++EQ++++LP +A + C+ LTEP
Sbjct: 79 YGLAAAELEAADSGIRTIVSVQGSLAMTAIDRFGTDEQRERWLPGMAAGELVGCFGLTEP 138
Query: 178 AYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAP 237
GSD +++ T A GW+L G KRWIG +T ADV V++AR T + I G+ V
Sbjct: 139 GSGSDPASMTTRAEPDGDGWVLHGAKRWIGLATIADVAVVWAR--TPDGIRGFCVPTGTD 196
Query: 238 GLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIG 297
G T T IE K+GLR D++L V +P + LPG + L +R + W +G
Sbjct: 197 GFTATPIEPKLGLRTSVQADVVLDGVRLPGDAVLPGATGLRGPFTCLNEARYGIMWGAMG 256
Query: 298 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT 357
+ + RY ER+QFG PLAAFQ+ QQKLV +Q +LV R +L + G +
Sbjct: 257 AARDAWTTAWRYTLERRQFGTPLAAFQLTQQKLVDTALELQKGMLVALRTGRLKDAGRLR 316
Query: 358 PGHASLGKSWITARARETVALGRELLGGNGILSDF 392
P S+GK A + R +LGGNG+ + +
Sbjct: 317 PEQISVGKLNNVREAIDICRTARTMLGGNGLSAAY 351
>gi|269124806|ref|YP_003298176.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
curvata DSM 43183]
gi|268309764|gb|ACY96138.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
43183]
Length = 384
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 185/351 (52%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI 105
D + D+ LT EE+ +R VR + +++ P +A+++E FP + P+LG L + G +
Sbjct: 2 DVLRLDNRLTDEERMIRDTVRAVVAEKVLPHVADWFEAGTFPARELAPELGKLGLLGMHL 61
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGC G S +A E+ D+ +F+ V SLAM I GS+EQKQ++LP +A
Sbjct: 62 KGYGCAGMSAVAYGVACRELEAGDSGLRSFVSVQGSLAMAAIHKYGSQEQKQQWLPKMAA 121
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD + T A + W+L G K WI N + ADV V++AR T
Sbjct: 122 GEAIGCFGLTEPDRGSDPGDMRTHARRDGADWVLNGTKMWITNGSVADVAVVWAR--TDE 179
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+LV PG T I K+ LR +++L+ V +P + LPGV + L+
Sbjct: 180 GIRGFLVPAGTPGFTARDIHRKLSLRASVTSELVLEDVRLPADAVLPGVTGLKGPLSCLS 239
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G Y+ Y K R+QFG P+ AFQ+ Q+KL M + L
Sbjct: 240 EARYGIVWGAVGAGRACYEAAVAYAKTREQFGRPIGAFQLTQEKLAWMEIALGQAGLTAL 299
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L ++G++TP S GK A + R +LG NGI ++ V +
Sbjct: 300 HLGRLKDEGSLTPQQVSFGKMANVRAALDVARQARTILGANGITLEYPVIR 350
>gi|88706259|ref|ZP_01103965.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
gi|88699410|gb|EAQ96523.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
Length = 395
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 191/357 (53%), Gaps = 9/357 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D L E++ VR + ++AP + E + + + ++G L + G TI
Sbjct: 15 DPFALDAQLNDEQRMVRDSAAQYAGAKLAPRVKEAFRQEHTDLEIFREMGELGLLGATID 74
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG T + E+ RVD+ + + V SSL M I G+EEQ++KYLP LA
Sbjct: 75 GYGCPGVDYTSYGLIAREVERVDSGYRSMLSVQSSLVMYPIYTYGTEEQREKYLPKLATG 134
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP YGSD + T A V+GG+ + G K WI NS ADV V++A+ T
Sbjct: 135 EWIGCFGLTEPDYGSDPGGMVTRARSVDGGYRISGAKMWISNSPVADVFVVWAK-TDDGL 193
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GL+ KIE K+ LR G+I++ +VFV +E LP V+ + L
Sbjct: 194 IRGFILEKGMDGLSAPKIEGKLALRASITGEIVMDEVFVAEEQLLPKVHGLKGPFGCLNN 253
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + Y ERKQFG PLAA Q+ Q KL M Q I +G +
Sbjct: 254 ARYGIAWGALGAAETCWHAALDYTLERKQFGKPLAANQLVQLKLADM----QTEIALGLQ 309
Query: 347 LC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
C +L + GA++P SL K +A R++LGGNGI D+ V + +M
Sbjct: 310 GCARAGQLMDAGAVSPDLISLIKRNSCGKALHIARQARDMLGGNGISDDYPVMRHMM 366
>gi|119475766|ref|ZP_01616119.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
gi|119451969|gb|EAW33202.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
Length = 395
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 195/354 (55%), Gaps = 9/354 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + + LT EE+ +R R+ + ++ P + E + + ++G L + G TI
Sbjct: 13 DPFLLEQQLTEEERLIRDSARQYAQNKLQPRVTEAYRNESTDPSIFREMGELGLLGSTIS 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + + E+ RVD+ + + V SSL M I G+E Q++KYLP LA
Sbjct: 73 GYGCPGVNYVSYGLIAREVERVDSGYRSMMSVQSSLVMYPIYTYGNEAQREKYLPKLASG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + T ATKV+GG+ + G K WI NS AD+ V++A+ T +
Sbjct: 133 EWIGCFGLTEPDHGSDPGGMITRATKVDGGYKMNGAKMWISNSPIADIFVVWAK-TDDDV 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GLT KIE K+ LR G+I+++ VFVP+E+ LP V + L+
Sbjct: 192 IRGFVLEKGFKGLTAPKIEGKLSLRASVTGEIVMQDVFVPEENLLPNVQGLKGPMGCLSS 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G + + +Y+ +RKQFG PLAA Q+ Q+KL M Q I +G +
Sbjct: 252 ARYGISWGVLGAAETCWHAARQYVLDRKQFGRPLAANQLIQKKLADM----QTEITLGLQ 307
Query: 347 LC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
C +L + + P S+ K +A + + R++ GGNGI +F V +
Sbjct: 308 GCLQAGRLKDNDQLAPELISMLKRNSCGKALDIARVARDMHGGNGISDEFPVFR 361
>gi|399910724|ref|ZP_10779038.1| glutaryl-CoA dehydrogenase [Halomonas sp. KM-1]
Length = 393
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 189/362 (52%), Gaps = 2/362 (0%)
Query: 39 SKFPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGA 97
SK P D ++ D L +E+ V + + ++ P + E F ++ ++G
Sbjct: 2 SKITPVTWEDPFRLIDQLDEDERMVHQTAHDYCQDKLMPRVLEANRHERFDREIMNEMGE 61
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G TI GYGC G + + E+ RVD+ + + V SSL M I GSE Q+
Sbjct: 62 LGLLGATIDGYGCAGMNYVSYGLIAREVERVDSGYRSAMSVQSSLVMYPIHAFGSEAQRD 121
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
KYLP LA + C+ LTEP +GSD ++T AT+ E GW L G K WI NS ADV V+
Sbjct: 122 KYLPKLATGEWVGCFGLTEPDHGSDPGGMSTRATRTENGWRLNGTKSWITNSPIADVFVV 181
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ ING++++K GL+ KIE K LR G I ++ V V D+ RLPGV
Sbjct: 182 WAKD-DEGVINGFILEKGMQGLSAPKIEGKFSLRASITGQIAMQDVEVSDDQRLPGVTGL 240
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 241 KGPFSCLNRARFGIAWGSMGAAEACWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEI 300
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
+ R+ ++ + G + P SL K +A + + R++ GGNGI ++ V +
Sbjct: 301 ALGLQAALRVGRMIDAGQLVPEAISLIKRNNCGKALDIARVARDMHGGNGIADEYHVIRH 360
Query: 398 IM 399
+M
Sbjct: 361 MM 362
>gi|381186861|ref|ZP_09894429.1| glutaryl-CoA dehydrogenase [Flavobacterium frigoris PS1]
gi|379651167|gb|EIA09734.1| glutaryl-CoA dehydrogenase [Flavobacterium frigoris PS1]
Length = 392
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY DDLL+ E + VR R +++E++PI+ EY +KAEFP +I LG + G
Sbjct: 8 SPDYYLLDDLLSEEHKLVRDSARAWVKREVSPIIEEYAQKAEFPKQIIKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP YGSD ++ T + ++L G K WI N+ FAD+ V++A++ T
Sbjct: 128 ATGEFIGCFGLTEPNYGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKDET 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASSTGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFDKPIAGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGKATTAQISMAKRNNVDMAIHIAREARQMLGAMGITGEYSIMRHMM 362
>gi|441500225|ref|ZP_20982393.1| Glutaryl-CoA dehydrogenase [Fulvivirga imtechensis AK7]
gi|441436010|gb|ELR69386.1| Glutaryl-CoA dehydrogenase [Fulvivirga imtechensis AK7]
Length = 404
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D+YQ DDLLT E + +R +R+ +++EI+P + E+ + A FP+ ++ K G + G T
Sbjct: 20 SPDFYQIDDLLTEEHKLIRGSIRDFVKREISPYIEEWCQNAHFPYEIVKKFGEIGAFGPT 79
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SL M I GSEEQ++KYLP L
Sbjct: 80 IPQEYGGGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQRKKYLPKL 139
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T + ++L G K WI NS ADV V++A+N
Sbjct: 140 ASGEWLGCFGLTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNSPKADVAVVWAKNEE 199
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + K LR G+++ V VP E+ LP +
Sbjct: 200 -GRIHGLIVERGMEGFSTPETHGKWSLRASCTGELVFDNVKVPKENLLPAKSGLGAPLMC 258
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ +FQ+ Q+KL +ML I L+
Sbjct: 259 LDSARYGIAWGAIGAAMDCYDSARRYAKERIQFGKPIGSFQLVQKKLAEMLTEITKAQLL 318
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
W+L K+ ++G T S+ K A R++ GG GI ++ + + +M
Sbjct: 319 NWKLGKMMDEGKATTPQISMAKRNSVEMALNIAREARQIHGGMGITGEYPMMRHMM 374
>gi|383828641|ref|ZP_09983730.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Saccharomonospora
xinjiangensis XJ-54]
gi|383461294|gb|EID53384.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Saccharomonospora
xinjiangensis XJ-54]
Length = 394
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 187/351 (53%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D+ D LT++E+ +R VR + E++P +A+++E A P + K G L V G +
Sbjct: 10 DFLAVDAELTADERDIRDTVRRFAKAELSPHIADWYENATLPVRDLAKSFGRLGVLGMHL 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S IA E+ +D+ +F+ V SLAM I GSEEQKQ++LPSLA
Sbjct: 70 AGYGCAGSSSVAYGIACRELEAIDSGLRSFVSVQGSLAMYAIHRYGSEEQKQRWLPSLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTE GSD +++ T A + W+L+G K WI N T ADV V++AR T +
Sbjct: 130 GEAIGCFGLTEADAGSDPASMRTRARRDGTDWVLDGTKMWITNGTVADVAVVWAR--TDD 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+++ D PG + +I K+ LR +++L V +P + LPGV + L
Sbjct: 188 GVRGFVIPADTPGFSAREITRKLSLRASLTAELVLDGVRLPADAVLPGVTGLRGPLSCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + Y+ Y R QFG PLAAFQ+ Q+KL ++ + LV
Sbjct: 248 EARFGIVFGVVGAARTCYETALEYTTTRAQFGQPLAAFQLTQRKLADLVVEVNRAGLVAL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + G + G S GK A + R +LG NGI ++ V +
Sbjct: 308 RLGRLKDAGQLHHGQVSFGKLANVRAALDVARTARSMLGANGISLEYPVMR 358
>gi|386772142|ref|ZP_10094520.1| acyl-CoA dehydrogenase [Brachybacterium paraconglomeratum LC44]
Length = 454
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 191/364 (52%), Gaps = 14/364 (3%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
ATP + P A + F D+ E+ R + E+ P + ++W++ E+P ++ +
Sbjct: 56 ATPETLLPATADHFALFQDV-EGEDLRAWADAR-SLADEVLPRINDWWDRGEYPIELVAR 113
Query: 95 LGALRVAGGTIKGYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
LG L + G PGH S + E++R+D S T + V LA+ +I L G
Sbjct: 114 LGELDL---LTDGLDVPGHRTLSPLATGLVNMELSRIDGSVGTMVGVQGGLALRSIMLLG 170
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTF 211
SEEQKQ++ SLA A +ALTEP +GSD+ +L T A + W+L G+KRWIGN
Sbjct: 171 SEEQKQRWGDSLATGAEHAAFALTEPDHGSDSVSLETIARREGDEWVLTGEKRWIGNGAG 230
Query: 212 ADVLVIFARNTTT------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFV 265
+ V++AR Q++G+LV + PG I K+ LR + I L +V V
Sbjct: 231 CHLSVVWARIDDAADPALHGQVSGFLVDQSLPGYEAEVIRGKVALRAIHQAHITLNEVRV 290
Query: 266 PDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQI 325
+ RLPG SF+DTSKVL +R VAW +G ++ Y+ + + R QFG PLA Q
Sbjct: 291 GLDQRLPGARSFKDTSKVLFATRAGVAWGALGHAIACYEAALEHAQNRIQFGRPLAKAQH 350
Query: 326 NQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGG 385
Q +L ML + +M L RL L G + P ASL K T ARE + R+LLGG
Sbjct: 351 VQVRLSDMLQTLTSMQLYCRRLADLEAAGTIRPEQASLAKVHNTRAAREIASNARDLLGG 410
Query: 386 NGIL 389
+GIL
Sbjct: 411 SGIL 414
>gi|431798334|ref|YP_007225238.1| acyl-CoA dehydrogenase [Echinicola vietnamensis DSM 17526]
gi|430789099|gb|AGA79228.1| acyl-CoA dehydrogenase [Echinicola vietnamensis DSM 17526]
Length = 402
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y DDL T+E +R +R+ ++KE++P + E+ + A FP ++PK G + G I
Sbjct: 20 DFYGLDDLFTAEHLLIRQSLRDFVKKEVSPYIEEWAQDAHFPSEIVPKFGEIGAFGPQIP 79
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + EI R D+ + + V SL M I GSEEQ++K+LP LA
Sbjct: 80 AKYGGGGLDYISYGLIMQEIERGDSGMRSTVSVQGSLVMYPIHAFGSEEQREKFLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ L T+ ++L G K WI N+ AD+ V++A++
Sbjct: 140 GEWLGCFGLTEPDHGSNPGGLTTSFKDNGDHYLLNGAKMWISNAPEADIAVVWAKDEN-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G T +K LR G+++ V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFTTPTTHHKWSLRASCTGELVFDNVKVPKENLLPGKSGLSAPLMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW IG +M Y+ RY ER QF P+AAFQ+ Q+KL +ML I L+ W
Sbjct: 259 AARYGIAWGAIGAAMDCYESAKRYAMERIQFDKPIAAFQLVQKKLAEMLTEITKAQLLAW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL L ++G T S+ K A A E R++ GG GI D+ + + +M
Sbjct: 319 RLGTLKDQGKATSAQISMAKRNNVAMALEIAREARQIHGGMGITGDYPIMRHMM 372
>gi|329898468|ref|ZP_08272409.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
gi|328920820|gb|EGG28269.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
Length = 399
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 190/357 (53%), Gaps = 9/357 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + + LT E++ +R ++ ++++ P + + + + + ++GAL + G TIK
Sbjct: 18 DPFLLEQQLTDEQRLIRDTAKQYAQEKLLPRVTQAFREESTDASIFKEMGALGLLGSTIK 77
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + E+ RVD+ + + V SSL M I G+EEQ++KYLP LA
Sbjct: 78 GYGCAGVDYISYGLIAREVERVDSGYRSMLSVQSSLVMYPIYAFGTEEQREKYLPKLATG 137
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP YGSD + T A VEGG+ L G K WI NS ADV V++A+ T Q
Sbjct: 138 EWIGCFGLTEPDYGSDPGGMITRARSVEGGYRLSGAKMWISNSPIADVFVVWAK-TDDGQ 196
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K PGL+ KIE K+ LR G+I+++ VFV +E LP V + L +
Sbjct: 197 IRGFILEKGMPGLSAPKIEGKLALRASITGEIVMEDVFVSEEQLLPNVKGLKGPFSCLNM 256
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI----QAMIL 342
+R +AW +G + + Y ER QFG PLAA Q+ Q KL M +I Q
Sbjct: 257 ARYGIAWGALGAAETCWQTARAYTLERSQFGRPLAANQLIQLKLADMQTDIALGLQGCFR 316
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
G +LC + P SL K A+A R++LGGNGI + V + +M
Sbjct: 317 AGQQLC----DDGIAPELISLIKRNSCAKALHIARQARDMLGGNGISDQYPVMRHMM 369
>gi|297171157|gb|ADI22167.1| acyl-CoA dehydrogenases [uncultured gamma proteobacterium
HF0200_24F15]
Length = 395
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 187/348 (53%), Gaps = 1/348 (0%)
Query: 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCP 111
D+ LT EE+ VR V+ ++ + P + + + F + ++G L + G + GYGC
Sbjct: 18 DEDLTEEERIVRDNVQRYCQEHLQPRILKAHREERFDREIFSEMGKLGMLGSVLDGYGCA 77
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + E+ RVD+S + + V SSL M I GSE Q+QK+LP LA I C
Sbjct: 78 GLNYVSYGLIAREVERVDSSYRSAMSVQSSLVMYPIYAYGSEHQRQKFLPRLATGEVIGC 137
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYL 231
+ LTEP +GSD + + A VEGG+ + G K WI N+ ADV V++A++ I G+L
Sbjct: 138 FGLTEPDFGSDPGGMKSHARGVEGGFYVSGTKTWITNAPIADVFVVWAKD-EEGVIRGFL 196
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
+++ PGL T+IE K LR + G+I + VFVPDE+ GV+ + L ++R +
Sbjct: 197 LERGMPGLVTTRIEGKFSLRASETGEISMDNVFVPDENVFNGVHGLRGPFACLNLARFGI 256
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + Y ER QFG PLAA Q+ Q+KL M I + RL +L+
Sbjct: 257 AWGAMGAAECCWHASRNYTLERHQFGRPLAANQLVQKKLADMQTEITLGLTGCLRLGRLF 316
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ G P SL K +A + + R+L G NGI ++ V + ++
Sbjct: 317 DAGHRLPEAVSLLKRNNCGKALDIARVARDLHGANGISDEYHVIRHVL 364
>gi|257070123|ref|YP_003156378.1| acyl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
gi|256560941|gb|ACU86788.1| acyl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
Length = 461
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 190/358 (53%), Gaps = 14/358 (3%)
Query: 48 YYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG 107
Y F D+ + QA + E+ P + ++W++ E+P +I +LG L + G
Sbjct: 76 YALFQDVAGEDLQA--WADARSLADEVLPRINDWWDRGEYPIELIARLGELDL---LTDG 130
Query: 108 YGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
PGH S + E++R+D S T + V LA+ +I L GSEEQKQ++ LA
Sbjct: 131 LDVPGHRTLSPLATGLVNMELSRIDGSVGTMVGVQGGLALRSIMLLGSEEQKQRWAEPLA 190
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ A +ALTEP +GSD+ +L T A + GW+L GQKRWIGN + V++AR
Sbjct: 191 RGTEHAAFALTEPDHGSDSVSLETVARRDGDGWVLSGQKRWIGNGAGCHLSVVWARVEDE 250
Query: 225 NQ------INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
+Q ++G+LV + PG I K+ LR + I L V +P RLPG SF+
Sbjct: 251 SQPALHGQVSGFLVDQSLPGYDAEVIRGKVALRAIHQAHITLDGVRIPLAQRLPGARSFK 310
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
DTS VL +R VAW +G ++ Y+ + ++R QFG PLA Q Q +L ML +
Sbjct: 311 DTSVVLFATRAGVAWGALGHALACYEAALEHAQKRIQFGRPLAKAQHVQVRLADMLQTLT 370
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+M L RL +L G + P ASL K T ARE + R+LLGG+GIL + V +
Sbjct: 371 SMQLHCRRLAELEAAGTIRPEQASLAKVHNTRAAREIASNARDLLGGSGILLENRVVR 428
>gi|341889063|gb|EGT44998.1| hypothetical protein CAEBREN_18627 [Caenorhabditis brenneri]
Length = 412
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 194/353 (54%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 27 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRNEKFDKSLIPEMGSMGLLGAPYQ 86
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I G+E+QKQKY+P LA
Sbjct: 87 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGTEDQKQKYIPDLASG 146
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS ADV+V++AR++
Sbjct: 147 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLSGSKTWISNSPVADVMVVWARSSRH 206
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP Q
Sbjct: 207 ENKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNAEGLQGPFGC 266
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +AW +G + + + +Y +R QFG PLA Q+ Q K+ ML I +
Sbjct: 267 LNNARLGIAWGALGAAEECFHLARQYTLDRHQFGRPLAQNQLMQLKMADMLTEISLGLQG 326
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G P S+ K +A E R++LGGNGI+ ++ + +
Sbjct: 327 CLRVSRLKDEGKSVPEQVSIIKRNSCGKALEIARKARDMLGGNGIVDEYHIMR 379
>gi|392378348|ref|YP_004985508.1| glutaryl-CoA dehydrogenase [Azospirillum brasilense Sp245]
gi|356879830|emb|CCD00758.1| glutaryl-CoA dehydrogenase [Azospirillum brasilense Sp245]
Length = 400
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 187/349 (53%), Gaps = 1/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
D+ LT +E+ +R R + ++ P + E F ++ ++G L G TI GYGC
Sbjct: 23 LDEQLTEDERMIRDAARSYCQDKLLPRVTEANRHEIFHREIMNEMGELGFLGSTIDGYGC 82
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G + + E+ RVD+ + + V SSL M I GS+ Q++KYLP LA I
Sbjct: 83 AGVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSDVQREKYLPKLATGEWIG 142
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 230
C+ LTEP GSD + + T A KV G+I+ G K WI NS ADV V++A+N +ING+
Sbjct: 143 CFGLTEPDAGSDPAGMKTRARKVADGYIVSGAKMWITNSPVADVFVVWAKN-DEGKINGF 201
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
+++K GL+ KIE K LR G+I++ +VFVP+E+RLP + L +R
Sbjct: 202 VLEKGMKGLSAPKIEGKFSLRASATGEIVMDEVFVPEENRLPNIEGIVGPFGCLNRARYG 261
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
+AW +G + + +Y +RKQFG PLAA QI Q KL M I + ++ +L
Sbjct: 262 IAWGAMGAAEFCFHAARQYQIDRKQFGRPLAANQIPQLKLANMQTEIALGLQAALQVGRL 321
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ G P SL K +A E + R++ GGNGI +F V + +M
Sbjct: 322 LDDGKAAPEMISLIKRNNCGKALEIARVARDMHGGNGIADEFHVIRHVM 370
>gi|333905276|ref|YP_004479147.1| acyl-CoA dehydrogenase [Streptococcus parauberis KCTC 11537]
gi|333120541|gb|AEF25475.1| acyl-CoA dehydrogenase [Streptococcus parauberis KCTC 11537]
Length = 401
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 188/355 (52%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D F LT E ++RE +E + P++ W KAE P +G + +
Sbjct: 14 EDVMGFAQELTEGEIKKLTQIRELLETKYRPLVNNCWMKAEVPEDFFKDMGKMNYLNDPL 73
Query: 106 KGYGCPG---HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G G S A E++R D S +TF+ VH L T GSEEQ + Y+P
Sbjct: 74 LFEGRDGAKRRSEMYFAFMCYELSRFDISMNTFVGVHIGLGHNTFLFGGSEEQVKYYIPK 133
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFARN 221
L + C+ALTEP +GSD + TT K +G WIL G+KRWIG ADV+ +FAR+
Sbjct: 134 LQSHELMTCFALTEPEHGSDVAGGLTTTAKYDGENWILNGEKRWIGGGAMADVVPVFARD 193
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T+Q+ ++V+K G T IENKI LRIV N ++ LK V VP+ RL +N F+D +
Sbjct: 194 VDTDQVKCFIVEKGQEGFTADVIENKIALRIVPNANLHLKDVKVPESKRLQNINGFKDVA 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
K+L +R VA G G +Y+ +RKQFG ++ +Q+ Q+KL M N + +
Sbjct: 254 KILYSTRAGVAAMAAGGMGGALQATLKYVTQRKQFGKEISNYQLVQEKLAMMQANTMSGL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L ++ E G + S+ K + R RETVA+GR + GGNGI D+ +A+
Sbjct: 314 AYSTQLARMQESGQYSEIATSMAKMFNALRLRETVAMGRGICGGNGITVDYDIAR 368
>gi|372489975|ref|YP_005029540.1| acyl-CoA dehydrogenase [Dechlorosoma suillum PS]
gi|359356528|gb|AEV27699.1| acyl-CoA dehydrogenase [Dechlorosoma suillum PS]
Length = 394
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 190/357 (53%), Gaps = 3/357 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D Q DD L++EE+ VR R+ + + P + + + + + +LG L + G T+
Sbjct: 7 EDPLQLDDQLSAEERQVRDTARQYSQDRLLPRIVQAFRHEQTDPAIFRELGELGLLGATL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S + EI RVD+ + + V SSLAM I GSE K++ LP +A
Sbjct: 67 DGYGCAGASYVSYGLLAREIERVDSGYRSMVSVQSSLAMYPIHAFGSEALKERLLPKMAT 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---NT 222
I C+ LTEP +GSD ++ + A V GGW L G K WI NS ADV V++A+ +
Sbjct: 127 GELIGCFGLTEPNHGSDPGSMESRAEAVPGGWELTGAKMWITNSPIADVFVVWAKDGQDE 186
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I G++++K GL+ I+ K+GLR G+I++ KVFVP+E+ LP V +
Sbjct: 187 DGGEIRGFVLEKGMKGLSAPVIQGKMGLRASVTGEIVMDKVFVPEENLLPKVKGLKGPFA 246
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y +R QFG PLAA Q+ Q+KL M I +
Sbjct: 247 CLNQARYGIAWGALGAAEACWHAARQYTLDRPQFGRPLAANQLVQKKLADMQTEIALGLQ 306
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L ++G P SL K +A E R++ GGNGI +F V + ++
Sbjct: 307 GCLRLGRLKDEGKDAPEMTSLLKRNSCGKALEIARTARDMHGGNGISDEFHVVRHML 363
>gi|374596464|ref|ZP_09669468.1| acyl-CoA dehydrogenase domain-containing protein [Gillisia limnaea
DSM 15749]
gi|373871103|gb|EHQ03101.1| acyl-CoA dehydrogenase domain-containing protein [Gillisia limnaea
DSM 15749]
Length = 392
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR RE ++++++PI+ E ++A+FP +I L + G
Sbjct: 8 APDYYNLDDLLTDEHKMVRDAAREWVKRDVSPIIEEAAQEAKFPKSIIKGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDHISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYKYGNEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI NS FAD+ V+++++
Sbjct: 128 ASGEWMGCFGLTEPDHGSNPGGMTTNFKDKGDHYLLNGAKLWISNSPFADIAVVWSKDEN 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGTIGAAMDCYDTALRYSKERMQFGKPIAGFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A A R++LG GI ++ + + +M
Sbjct: 307 AWRLGVLRNEGKATTAQISMAKRNNVAMALNVAREARQILGAMGITGEYSIMRHMM 362
>gi|410028882|ref|ZP_11278718.1| glutaryl-CoA dehydrogenase [Marinilabilia sp. AK2]
Length = 392
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 188/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+Y DDLLT E + +R +R+ ++KEI+P + ++ +KA FP+ ++ K G + G I
Sbjct: 10 DFYGVDDLLTEEHKLIRSSIRDFVKKEISPYIEDWAQKAHFPYEIVRKFGEVGAFGPQIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI R D+ + V SL M I GSEEQK KYLP LA
Sbjct: 70 EEYGGGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQKMKYLPKLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI NS AD+ V++A+N
Sbjct: 130 GEMLGCFGLTEPDFGSNPSGMVTNFKDMGDHYLLNGAKMWISNSPKADIAVVWAKNEA-G 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + K LR G+++ V VP E+ LPG + L
Sbjct: 189 RIHGLIVERGMEGFSTPETHGKWSLRASATGELVFDNVKVPKENLLPGKSGLGAPMMCLD 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 249 SARYGIAWGAVGAAMDCYDSARRYALERIQFDKPIASFQLIQKKLAEMLSEITKAQLLNW 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L + +G T SL K A A E R++ GG GI ++ + + +M
Sbjct: 309 KLGMMMNEGKATTAQISLAKRNNVAMALEIAREARQVHGGMGITGEYPLMRHMM 362
>gi|347754760|ref|YP_004862324.1| acyl-CoA dehydrogenase [Candidatus Chloracidobacterium thermophilum
B]
gi|347587278|gb|AEP11808.1| Acyl-CoA dehydrogenase [Candidatus Chloracidobacterium thermophilum
B]
Length = 389
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+ D LL+SEE +R R+ + + + PI+ + +E+ +P +I +G L G T+
Sbjct: 5 DFLNIDSLLSSEELQIRDVARQFVRERVLPIIEDCYERGVYPQELIKPMGELGFYGCTLP 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + + E+ R D+ +F V SSL M I G+EEQK+K+LP+LA+
Sbjct: 65 EEYGCAGLNNIAYGLITQELERGDSGIRSFASVQSSLVMYPIYTYGTEEQKRKWLPALAK 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN-TTT 224
I C+ LTEP YGS+ S + T A + + GW L G K WI N + ADV V++A+
Sbjct: 125 GEKIGCFGLTEPDYGSNPSDMVTRAERTKYGWKLNGAKMWITNGSIADVAVVWAKTGADA 184
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G+LV+K PG + +I+ K LR +++ + +P+E+ LP V + L
Sbjct: 185 RSIRGFLVEKGTPGFSAPEIKKKHSLRASITSELIFQDCEIPEENLLPNVEGLRGPLSCL 244
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G ++ Y Y R QFG P+AAFQ+ Q+KL M+ I L+
Sbjct: 245 NQARYGIAWGAVGSALATYTTALDYSLSRIQFGRPIAAFQLTQRKLADMITEISKAQLLA 304
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + KL + G +TP S+ K A A R +LG NGI +++ V +
Sbjct: 305 YHVGKLKDAGKVTPAQISMAKRNNVAMALNVAREARTILGANGISAEYPVMR 356
>gi|341887572|gb|EGT43507.1| hypothetical protein CAEBREN_29811 [Caenorhabditis brenneri]
Length = 412
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 194/353 (54%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 27 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRNEKFDKSLIPEMGSMGLLGAPYQ 86
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I G+E+QKQKY+P LA
Sbjct: 87 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGTEDQKQKYIPDLASG 146
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS ADV+V++AR++
Sbjct: 147 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLSGSKTWISNSPVADVMVVWARSSRH 206
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP Q
Sbjct: 207 GNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNAEGLQGPFGC 266
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +AW +G + + + +Y +R QFG PLA Q+ Q K+ ML I +
Sbjct: 267 LNNARLGIAWGALGAAEECFHLARQYTLDRHQFGRPLAQNQLMQLKMADMLTEISLGLQG 326
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G P S+ K +A E R++LGGNGI+ ++ + +
Sbjct: 327 CLRVSRLKDEGKSEPEQVSIIKRNSCGKALEIARKARDMLGGNGIVDEYHIMR 379
>gi|94972228|ref|YP_594268.1| acyl-CoA dehydrogenase [Deinococcus geothermalis DSM 11300]
gi|94554279|gb|ABF44194.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
11300]
Length = 430
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 188/355 (52%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI 105
D + DLLT EE+ +R VR + E+ P +AE+W+ +FP V+ K G L + G T
Sbjct: 47 DEFGVFDLLTPEERLIRESVRAFCDAELLPKIAEWWDSGDFPVREVMRKFGQLGLLGPTT 106
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + + E+ RVD+ + V SL M I GSE QK++YLP LA
Sbjct: 107 PEEYGGAGTSYSAYGAMMYELERVDSGLRSAASVQGSLVMFPILNYGSEAQKRRYLPGLA 166
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD A+ T A + ++L G K WI NS AD+ V++A++
Sbjct: 167 SGELIGCFGLTEPDGGSDPGAMRTRAHRDGNAYVLHGNKMWITNSPVADLAVVWAKDDE- 225
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++V D PG + KI K+ LR G+I+L++ +P E+ LPG + L
Sbjct: 226 GIIRGFIVPTDTPGFSAPKIHRKMSLRASVTGEIVLEECRIPAENVLPGSGGLKSPLSCL 285
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G V Y R+ FG P+AA Q+ Q KLV+M + A +L+
Sbjct: 286 TSARFGIAWGAMGALEAVLQTALDYTGSRRTFGKPIAARQLVQDKLVRMATDHSAGLLLA 345
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL +L + G M S K A + L RELLGGNGI +++ V + ++
Sbjct: 346 WRLGQLKDTGRMNYAQVSYAKRNNVRVALQGARLARELLGGNGITTEYPVIRHML 400
>gi|86135150|ref|ZP_01053732.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
gi|85822013|gb|EAQ43160.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
Length = 392
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R+ ++++++PI+ +Y +KAEFP +I L + G
Sbjct: 8 APDYYNIDDLLTEEHKLIRDSARDWVKRDVSPIIEDYAQKAEFPKQIINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + +G G + + EI R D+ + V SSL M I G++EQ++KYLP L
Sbjct: 68 IPEEFGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFTYGNDEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T ++L G K WI N+ F DV V++A+N
Sbjct: 128 ASGEWMGSFGLTEPNHGSNPGGMETNFKDKGDHYLLNGAKMWISNAPFCDVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVQVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W IG +M YD RY KER+QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGISWGAIGAAMDCYDTALRYAKEREQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A + R++LGG GI D+ + + +M
Sbjct: 307 AWRLGTLKNEGKATSAQISMAKRNNVEMALKVAREARQMLGGMGISGDYSIMRHMM 362
>gi|119504493|ref|ZP_01626572.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
gi|119459515|gb|EAW40611.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
Length = 400
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 192/353 (54%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ D L E++ VR R+ ++++ P + + + ++ ++G + + G TI
Sbjct: 20 DPFELDSQLNDEQRMVRDSARQYAQEKLLPRVKDAFRNESTDPNIFREMGEMGLLGSTID 79
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + E+ RVD+ + + V SSL M I G + Q++KYLP LA
Sbjct: 80 GYGCPGVDYVCYGLVAREVERVDSGYRSMLSVQSSLVMYPIYAYGDDAQREKYLPKLATG 139
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + T A V+GG+ + G K WI NS ADV V++A+ T +
Sbjct: 140 EWIGCFGLTEPDHGSDPGGMTTRAKSVDGGYRVSGAKMWISNSPIADVFVVWAK-TDDDV 198
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GL+ KIE K+ LR G+I++ +VFVP+E+ LP V + L
Sbjct: 199 IRGFILEKGMEGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVRGLKGPFGCLNN 258
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + +Y +R+QFG PLAA Q+ Q KL M +I + +R
Sbjct: 259 ARYGIAWGTLGAAETCWHTARQYTLDRQQFGRPLAANQLIQLKLADMQTDISLAMQGCFR 318
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ G ++P SL K +A E R++LGGNGI ++ + + +M
Sbjct: 319 AGQMLSAGTISPDLISLIKRNSCGKALEIARKARDMLGGNGISDEYPIMRHMM 371
>gi|225871867|ref|YP_002753321.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
gi|225793368|gb|ACO33458.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
Length = 392
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 190/361 (52%), Gaps = 2/361 (0%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FP D+ FD LLT +E+ VR R +E+ + PI+ + + FP ++ +G L
Sbjct: 3 FPFQGVDFLNFDSLLTEDERMVRDTTRRFVEENLIPIIEQCNREGRFPRELVKPMGELGF 62
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S + + E+ R D+ +F+ V S+L M I GSEEQK ++L
Sbjct: 63 FGANLEGYGCAGMSNIEYGLVMQELERGDSGLRSFVSVQSALVMYPIYAFGSEEQKNEWL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA + C+ LTEP +GS+ + T A K G++L G+K WI + + ADV VI+A+
Sbjct: 123 PKLATGEKLGCFGLTEPDFGSNPGGMRTRARKTADGYVLNGEKMWITSGSIADVAVIWAK 182
Query: 221 -NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+++ G+LV+ D G + K LR + L+ V VP ++ LPG +
Sbjct: 183 VEDEDDRVRGFLVETDRKGFEARDVHGKWSLRASVTSGLSLQDVHVPAKNLLPGTGGLKS 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQ 338
L +R ++W IG +M YD +Y + RKQF PLA+ Q+ Q+KL M+ I
Sbjct: 243 PLMCLNQARYGISWGVIGAAMACYDTALQYTQTRKQFRDQPLASHQLVQEKLAWMITEIS 302
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
L+ + KL + G + H S+ K A E + R++LGGNGI D+ + + +
Sbjct: 303 KAQLLIHHVGKLKDAGKVGFEHISMAKRNNVWMALECTRISRDMLGGNGITDDYPIMRHM 362
Query: 399 M 399
M
Sbjct: 363 M 363
>gi|406663735|ref|ZP_11071763.1| Acyl-CoA dehydrogenase, short-chain specific [Cecembia lonarensis
LW9]
gi|405552028|gb|EKB47592.1| Acyl-CoA dehydrogenase, short-chain specific [Cecembia lonarensis
LW9]
Length = 402
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 188/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+Y DDLLT E + +R +R+ ++KEI+P + ++ +KA FP+ ++ K G + G I
Sbjct: 20 DFYGVDDLLTEEHKLIRSSIRDFVKKEISPYIEDWAQKAHFPYEIVRKFGEVGAFGPQIP 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI R D+ + V SL M I GSEEQK KYLP LA
Sbjct: 80 EEYGGGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQKMKYLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI NS AD+ V++A+N
Sbjct: 140 GEMLGCFGLTEPDFGSNPSGMVTNFKDMGDHYLLNGAKMWISNSPKADIAVVWAKNEA-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + K LR G+++ V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFSTPETHGKWSLRASATGELVFDNVKVPKENLLPGKSGLGAPMMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 259 SARYGIAWGAVGAAMDCYDSARRYALERIQFDKPIASFQLIQKKLAEMLSEITKAQLLNW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L + +G T SL K A A + R++ GG GI ++ + + +M
Sbjct: 319 KLGMMMNEGKATTAQISLAKRNNVAMALDIAREARQIHGGMGITGEYPLMRHMM 372
>gi|399925786|ref|ZP_10783144.1| glutaryl-CoA dehydrogenase [Myroides injenensis M09-0166]
Length = 392
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R ++KE++PI+ ++ ++AEFP +IP L + G
Sbjct: 8 APDYYLLDDLLTEEHKLIRDTARAWVKKEVSPIIEDFAQRAEFPKQLIPGLAEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGIRSTSSVQSSLVMYPIWKYGNEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP YGS+ + T + ++L G K WI N+ FA + V++A+N
Sbjct: 128 ATGEYIGCFGLTEPDYGSNPGGMVTNFKDMGDHYLLNGAKMWISNAPFAQIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY +ER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSQERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A A + R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATTAQISMAKRNNVAMALDIARDARQMLGGMGITGEYSIMRHMM 362
>gi|323357213|ref|YP_004223609.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
gi|323273584|dbj|BAJ73729.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
Length = 413
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 186/349 (53%), Gaps = 6/349 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DYY + ++AV + + + E+ M W+ A +P ++ ++G L + I
Sbjct: 26 TDYYAVFADIPDADRAVWDRAKAFCD-EVGTRMQGEWDAATYPVELLRRMGELELFTDGI 84
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ P S A + E++R D S +T + V LA+ T+AL GS EQ+ ++L LA
Sbjct: 85 EHPELPESSPLAAGLVNMEVSRHDGSLATALAVQGGLALRTLALFGSPEQQARWLGPLAD 144
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR----- 220
+ +ALTEP +GSD+ +L TTAT+ GW L G K+WIGN + ++AR
Sbjct: 145 GTVLGAFALTEPDHGSDSVSLETTATRTADGWSLSGTKKWIGNGASGGITFVWARVENEG 204
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +LV++D PG T T I K+ LR + I + V + + LPG ++F+D
Sbjct: 205 GDDHGNVRCFLVEQDTPGYTGTVITGKVSLRGIHQAHIAMDDVRLAPDAVLPGTHTFKDA 264
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
S VL +R VAW +G + Y++ Y ER QFG PLA FQ+ Q++L QML + AM
Sbjct: 265 STVLFATRSGVAWSALGHATACYEIARTYATERMQFGKPLAKFQMVQERLAQMLDELTAM 324
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L RL L G + P ASL K T AR ++ R+LLGGNGIL
Sbjct: 325 QLYCRRLADLESSGGLRPTQASLAKYHNTRAARRVASIARDLLGGNGIL 373
>gi|406990418|gb|EKE10077.1| hypothetical protein ACD_16C00080G0013 [uncultured bacterium]
Length = 387
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 190/353 (53%), Gaps = 2/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + F+ L+ EE+ +R V+ ++ + P + E + V +LGAL G TI+
Sbjct: 8 DPFLFEAQLSEEERLIRDTVKNYAQERLMPRILEANRHETYDGAVFKELGALGYLGMTIE 67
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S T + E+ RVD+S + + V SSL M I G E+QKQKYLP LA+
Sbjct: 68 GYGCAGSSYTAYGLVARELERVDSSYRSLLSVQSSLVMNAIFEFGDEKQKQKYLPPLAKG 127
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GSD + + T GWIL G K WI NS AD+ +++A+ +
Sbjct: 128 ELVGCFGLTEPNHGSDPAGMETYVKAKGNGWILNGSKAWITNSPLADIFIVWAKEGS--D 185
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I +L++K GL+ KIE K LR G+I+L VFVP E+ LP + + + L
Sbjct: 186 IKAFLLEKGMEGLSAPKIEGKFSLRASPTGEIVLNDVFVPKENFLPKSHGLKAVMQCLNK 245
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + + Y+ ER QFG PLAA Q+ Q KLV+M +I + R
Sbjct: 246 ARYGIAWGALGAAEFCWHLARAYVLERSQFGRPLAANQLIQAKLVKMQTDIALGLQGVLR 305
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ P SL K ++ E R++LG NGI ++ V + +M
Sbjct: 306 MGRLMDEDRCAPELISLLKRNNAGKSLEIARQARDMLGANGISDEYHVIRHLM 358
>gi|375147764|ref|YP_005010205.1| glutaryl-CoA dehydrogenase [Niastella koreensis GR20-10]
gi|361061810|gb|AEW00802.1| Glutaryl-CoA dehydrogenase [Niastella koreensis GR20-10]
Length = 394
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DY+ D+LLT E++ VR VR +++EI+PI+ EY +K+EFP ++ ++G L G T
Sbjct: 10 SPDYFLLDELLTDEQKLVRESVRNYVKREISPIIEEYAQKSEFPEQIVQQMGELGCFGPT 69
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + E+ R D+ + V SL M I GSE+Q++KYLP L
Sbjct: 70 IPVEYGGGGLDYVSYGLMMQELERGDSGVRSTASVQGSLVMFPIFEYGSEDQRRKYLPKL 129
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GSD ++ T T +L G K WI N+ +A V +++A++
Sbjct: 130 ANGEWLGCFGLTEPDHGSDPGSMTTHFTDAGDHVVLNGAKMWISNAPYAKVAIVWAKDEE 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
++ G +V++ G T NK LR G+++ V VP E+ LP V +
Sbjct: 190 -GEVRGLIVERGMKGFTAPLTHNKWSLRASATGELVFDNVKVPKENILPNVKGLKGPLSC 248
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY KER QF P+ AFQ+ Q+KL +M+ I L+
Sbjct: 249 LTRARYGIAWGVVGAAMDCYDTALRYSKERYQFDKPIGAFQLQQKKLAEMVTEITKAQLL 308
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + TP S+ K A R++LGG GI ++ + + +M
Sbjct: 309 NWRLGILMNEEKATPQQVSMAKRNGCEIAAAIAREARQILGGAGITGEYSIMRHMM 364
>gi|308176382|ref|YP_003915788.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307743845|emb|CBT74817.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 392
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 189/350 (54%), Gaps = 8/350 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D FD LL++EE A+R VR +++ I P +A+++ A FP ++P++ L + G +
Sbjct: 11 ADLINFDSLLSAEELALRGTVRGFVKEHIKPNIAKWYNDAVFPLEIVPEMAKLGLLGMHL 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S IA AE+ D+ TF+ V SLAM I GSEEQKQ++LP +A
Sbjct: 71 DGYGCGGRSAVEYGIAGAELEAGDSGLRTFVSVQGSLAMSAIYKHGSEEQKQQWLPKMAA 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD S++ T A + W++ G KRWIG + A V VI+A+ T
Sbjct: 131 GEAIGCFGLTEPTAGSDPSSMTTFARRDGDDWVINGSKRWIGLANVAQVAVIWAQ--TEE 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V + PG T T IE K+ +R +I + + +P LP V + L
Sbjct: 189 GIRGFVVPTNTPGFTATPIEQKLSMRASIQCEIEMVDMRLPGSAVLPNVVGLKGPFSCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + ++ Y +ER QF PLA +Q+ QQKLV M I L+
Sbjct: 249 EARYGILWGSMGAARDAFEDALAYSQERLQFDKPLAGYQMTQQKLVDMALEINKGFLLAL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
+ +L + G + S+GK RE +A+ RE +LGGNGI D+
Sbjct: 309 HIGRLKDAGKLDLHMISVGK---LNNCREAIAICREARTILGGNGITLDY 355
>gi|340618158|ref|YP_004736611.1| glutaryl-CoA dehydrogenase [Zobellia galactanivorans]
gi|339732955|emb|CAZ96330.1| Glutaryl-CoA dehydrogenase [Zobellia galactanivorans]
Length = 392
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + VR R+ ++++++PI+ Y +KAEFP ++ L + G
Sbjct: 8 APDYYHLDDLLSEEHKLVRDAARQWVKRDVSPIIEAYAQKAEFPKQILGGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYTYGTEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + T + ++L G K WI NS FAD+ V++A+N
Sbjct: 128 ASGEMMGCFGLTEPNHGSNPSGMETKFKDMGDHYLLNGAKLWISNSPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP + LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W IG +M YD RY KER QFG P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGISWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+RL +L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 AFRLGQLKNEGKATSAQISMAKRNNVEMAITIAREARQVLGGMGITGEYSIMRHMM 362
>gi|126663014|ref|ZP_01734012.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
gi|126624672|gb|EAZ95362.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
Length = 392
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY D+LL+ E + VR R ++KE++PI+ EY +KAEFP ++ LG + G
Sbjct: 8 SPDYYLLDELLSDEHKMVRDAARAWVKKEVSPIIEEYAQKAEFPHQIVKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP YGS+ + + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEFIGCFGLTEPDYGSNPAGMVTNYKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGKATTAQISMAKRNNVDMALTIARDARQMLGGMGITGEYSIMRHMM 362
>gi|71906179|ref|YP_283766.1| acyl-CoA dehydrogenase [Dechloromonas aromatica RCB]
gi|71845800|gb|AAZ45296.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
aromatica RCB]
Length = 391
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 188/351 (53%), Gaps = 2/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D L ++E+ VR R +K +AP + + + + ++G + + G T+
Sbjct: 10 DPLLLDSQLAADERQVRNAARSFAQKALAPRIRDAFRNETTDPAIFREMGDMGLLGPTLP 69
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + EI RVD++ T + V SSL ML I GSEEQKQKYLP L +
Sbjct: 70 PQYGGAGLNYVSYGLIAREIERVDSAYRTLLSVQSSLVMLPIYAFGSEEQKQKYLPKLGK 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD +L T A V GGW L G K WI ++ ADV V++A++
Sbjct: 130 GEWIGCFGLTEPNSGSDPGSLATRARTVPGGWKLSGSKNWISSAPIADVFVVWAKDDD-G 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+++ K PGL+ I K+G+R G+I++ +VFVP+E+ LPGV+ + L
Sbjct: 189 VIRGFILDKGMPGLSAPVIHGKVGMRAAITGEIVMDEVFVPNENLLPGVSGLKGPFTCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +RKQF PLAA Q+ Q+KL M I I
Sbjct: 249 SARYGIAWGALGAAEACWHTARQYTLDRKQFDKPLAANQLIQKKLADMQTEITLGIQGAL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ + G+ TP S+ K +A + R++LGGNGI DF V +
Sbjct: 309 RLGRMMDDGSATPEIVSMMKRNSCGKALDIARTARDMLGGNGISDDFGVIR 359
>gi|397691427|ref|YP_006528681.1| glutaryl-CoA dehydrogenase [Melioribacter roseus P3M]
gi|395812919|gb|AFN75668.1| glutaryl-CoA dehydrogenase [Melioribacter roseus P3M]
Length = 389
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 194/351 (55%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DY + D LL+ EE VR + E + +EI P++ +++E+ FP ++IPK+ L + G T+
Sbjct: 8 DYLELDSLLSEEEILVRNNIYEFVRREIIPLIEKHYEEGTFPRNLIPKMAELGIFGITLP 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC + +A+ E+ R D+ +F V S+L M I GSE+QK +LP LA+
Sbjct: 68 EKYGCANLNNVAYGLAMQELERGDSGIRSFASVQSALVMYPIYTFGSEKQKDYWLPKLAR 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ + + T A K + G++L G K WI N + ADV +++A+
Sbjct: 128 GEAVGCFGLTEPDFGSNPAGMLTKADKTKDGYLLNGAKMWITNGSIADVAIVWAK--LEG 185
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G++V+KD G + +++ K LR +++L V +P+E+ LP + L
Sbjct: 186 NVRGFIVEKDRKGFSTVEMKGKHSLRASVTSELILDNVEIPEENLLPQTTGLKSALMCLN 245
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW G + Y Y K R QF P+AA+Q+ Q+KLV ML I L+
Sbjct: 246 QARYGIAWGVTGAMIECYLSAVDYSKSRIQFDKPIAAYQMTQEKLVYMLTEITKAQLLNL 305
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ +L + G H S+ K +A E + RE+LG NGIL+++ V +
Sbjct: 306 QIGRLKDIGKAKHTHISMAKRNNCEKALEIAQIAREILGANGILNEYPVMR 356
>gi|308509436|ref|XP_003116901.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
gi|308241815|gb|EFO85767.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
Length = 412
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 195/353 (55%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 27 DAFQLSDQLTDDERSLMLSAREYCQERLLPRVTEAYRNEKFDKSLIPEMGSMGLLGAPYQ 86
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I G+EEQK+KY+P LA
Sbjct: 87 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGTEEQKEKYIPDLASG 146
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS ADV+V++AR++
Sbjct: 147 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLSGSKTWISNSPVADVMVVWARSSRH 206
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP V
Sbjct: 207 GNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLAGPFGC 266
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +AW +G + + + +Y +R QFG PLA Q+ Q K+ ML I +
Sbjct: 267 LNNARLGIAWGALGAAEECFHLARQYTLDRHQFGRPLAQNQLMQLKMADMLTEISLGLQG 326
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G + P S+ K ++ E R++LGGNGI+ ++ + +
Sbjct: 327 CLRVSRLKDEGKVQPEQISIIKRNSCGKSLEIARKARDMLGGNGIVDEYHIMR 379
>gi|72161472|ref|YP_289129.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
gi|71915204|gb|AAZ55106.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
Length = 396
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 184/359 (51%), Gaps = 4/359 (1%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRV 100
P D+ D L++EE+AVR VRE +E+ P +AE++ P + K G L +
Sbjct: 10 PDPLDFLAVDSSLSAEERAVRDTVREFGRRELLPHVAEWFAAGTIPDPHGLARKFGQLGL 69
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G + GYGCPG +A E+ VD+ +F+ V SLAM I GSEEQKQ++L
Sbjct: 70 LGMHLDGYGCPGAGAVAYGLACRELEAVDSGLRSFVSVQGSLAMTAIHRYGSEEQKQQWL 129
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP GSD A+ T A +V W+L G K WI N + ADV V++A
Sbjct: 130 PRMAAGEAIGCFGLTEPDSGSDPGAMRTRARRVGADWVLTGTKMWITNGSVADVAVVWA- 188
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T I G+LV PG T T IE K+ LR + L +V +PD RLP +
Sbjct: 189 -GTEEGIRGFLVPAGTPGFTATVIERKLSLRASITAALSLDEVRLPDSARLPLAAGLRAP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + W G + Y+ Y R+QFG P+AAFQ+ Q+KL +M+ ++
Sbjct: 248 LSCLTEARYGIVWGAAGAARACYEAALEYATSREQFGQPIAAFQLTQRKLAEMVVDVNQA 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L L +L E GA S GK A A+ A R + G NGI D+ V + ++
Sbjct: 308 SLTALHLGRLKEAGACHHYQVSFGKLANVAAAQRVAAKARSVHGANGITLDYPVLRHLL 366
>gi|325286599|ref|YP_004262389.1| glutaryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
gi|324322053|gb|ADY29518.1| Glutaryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
Length = 392
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + VR R+ ++++++PI+ +Y +KAEFP +I L + G
Sbjct: 8 APDYYNIDDLLSEEHKLVRDAARQWVKRDVSPIIEDYAQKAEFPKQIISGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYTYGTEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T + ++L G K WI N+ F DV V++A+N
Sbjct: 128 ASGEFMGSFGLTEPNHGSNPGGMETKYKDMGDHYLLNGAKLWISNAPFCDVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ING +V++ G + + NK LR G+++ V VP E+ LP N
Sbjct: 188 -GRINGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKNGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ A+Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGAYQLQQKKLAEMVTEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L +G T S+ K A R++LG GI ++ + + +M
Sbjct: 307 ALRLGQLKNEGKATTAQISMAKRNNVDMALNIAREARQVLGAMGITGEYSIMRHMM 362
>gi|354613842|ref|ZP_09031743.1| Glutaryl-CoA dehydrogenase [Saccharomonospora paurometabolica YIM
90007]
gi|353221799|gb|EHB86136.1| Glutaryl-CoA dehydrogenase [Saccharomonospora paurometabolica YIM
90007]
Length = 393
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D+ DD L++EE+ +R VRE E+ P +A+++E P + K G L V G +
Sbjct: 10 DFLGVDDGLSAEERDIRDAVREFARAELEPRIADWYETGNLPARDLAKDFGRLGVLGMHL 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S +A E+ VD+ +F+ V SLAM I GSEEQKQ++LP++A
Sbjct: 70 TGYGCAGTSAVAYGVACRELEAVDSGLRSFVSVQGSLAMFAIHRWGSEEQKQRWLPAMAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ T A + WIL+G K WI N T ADV V++AR T
Sbjct: 130 GEALGCFGLTEPDAGSDPASMRTRARRDGSDWILDGTKMWITNGTVADVAVVWAR--TDE 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G++V D PG T T++ K+ LR +++L V +P + LP V + L
Sbjct: 188 GVRGFVVPTDTPGFTATEVTRKLSLRASLTAELVLDGVRLPADAVLPEVTGLRGPLSCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + Y+ Y R+QFG PLAA+Q+ Q+KL ++ + L
Sbjct: 248 EARYGILFGAVGAARTCYEAALEYTTTREQFGEPLAAYQLTQRKLADLVVEVNRAGLTAL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L + G + S GK A + R +LG NGI ++ V +
Sbjct: 308 HLGRLKDAGTLHHNQVSFGKLANVRSALDVARTARSMLGANGISLEYPVMR 358
>gi|320165880|gb|EFW42779.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 431
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 192/355 (54%), Gaps = 1/355 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LLT EE+ VR E + ++ P + + F + ++G L + G TI
Sbjct: 47 TDPLNMDGLLTEEERMVRDMANEYCQSKLLPRVKLAYRHETFDRAIFTEMGKLGMLGATI 106
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY CPG S + E+ RVD+S + + V SSL M I G+E Q++KYLP LA+
Sbjct: 107 QGYECPGVSSVAYGLIAREVERVDSSYRSAMSVQSSLVMYPIYAYGTEAQRKKYLPGLAR 166
Query: 166 LNTIACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD ++ T A K +G +IL G K WI NS ADV V++A+
Sbjct: 167 GELVGCFGLTEPNHGSDPGSMETRARKTPQGNYILNGAKMWITNSPIADVFVVWAKTVED 226
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ KIE K LR G+I+++ V VP E+ LP V + L
Sbjct: 227 GIIRGFVLEKGMKGLSAPKIEGKFSLRASPTGEIVMQDVEVPAENLLPNVEGLKGPFGCL 286
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +++ +G + + Y +RKQFG PLA+ Q+ Q+KL ML I +L
Sbjct: 287 TNARYGISFGAMGAAEFCMEAARTYTVDRKQFGRPLASNQLIQKKLADMLTEINLGLLAS 346
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ +L + G + P SL K +A + + R++LGGNGI ++ V + ++
Sbjct: 347 LQVGRLKDAGKLAPEMVSLVKRNNCGKALDIARVARDMLGGNGISDEYGVIRHVL 401
>gi|410664216|ref|YP_006916587.1| glutaryl-CoA dehydrogenase [Simiduia agarivorans SA1 = DSM 21679]
gi|409026573|gb|AFU98857.1| glutaryl-CoA dehydrogenase [Simiduia agarivorans SA1 = DSM 21679]
Length = 396
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 189/351 (53%), Gaps = 1/351 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + D LT EE+ VR + + ++ P + + + + ++G L + G +
Sbjct: 14 ADPFLMDLQLTEEERMVRDTAHQYAQDKLLPRVRDSFRNETTDPAIFREMGELGLLGSPL 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGCPG S + E+ RVD+ + + V SSL M I GSE QK+KYLP LA
Sbjct: 74 QGYGCPGVSYVSYGLIAREVERVDSGFRSMMSVQSSLVMYPIYAYGSEAQKEKYLPKLAS 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD + + T A K +GG+ L G K WI NS ADV V++A++
Sbjct: 134 GEWIGCFGLTEPDHGSDPAGMVTRARKTDGGYRLSGAKMWITNSPIADVFVVWAKD-DEQ 192
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+++ K GL+ KIE K+ LR G+I++ VFVP+E+ LPGV + L
Sbjct: 193 VIRGFILDKGMKGLSAPKIEGKLALRTSVTGEIVMDDVFVPEENLLPGVTGLKGPFGCLN 252
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R+ ++W +G + + Y ERKQFG PLAA Q+ Q+KL M +I +
Sbjct: 253 SARLGISWGALGAAEACWHSARDYTLERKQFGRPLAANQLIQKKLAIMQTDISLALQGCL 312
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R +L ++G + P SL K +A E R++ GGNGI ++ V +
Sbjct: 313 RAAQLKDQGQLAPELISLLKRNSCVKALEIAREARDMHGGNGISDEYCVMR 363
>gi|408674481|ref|YP_006874229.1| acyl-CoA dehydrogenase domain-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387856105|gb|AFK04202.1| acyl-CoA dehydrogenase domain-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 403
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 186/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D+YQ DDL T E+ +R VR+ ++KEI+PI+ + ++ EFP ++ K+G + V G T
Sbjct: 19 SPDFYQIDDLFTDEQLMIRSAVRDFVKKEISPIIEDAAQRCEFPEFIVKKMGDMGVFGPT 78
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG + + EI R D+ + V SL M I GSEEQK+K+LP L
Sbjct: 79 IPLEYGGQSFDYISYGLMMQEIERGDSGMRSTASVQGSLVMFPIYKYGSEEQKKKFLPKL 138
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
+ C+ LTEP +GS+ S + T + IL G K WI NS ADV V++A+N
Sbjct: 139 GSGEYLGCFGLTEPDFGSNPSGMTTNFKEDGDHVILNGSKMWISNSPRADVAVVWAKNEQ 198
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G + +I K LR G+++ V VP + LP + +
Sbjct: 199 -GRIKGLIVERGMEGFSTPEIHGKWSLRASITGELVFDNVRVPKSNILPEADGLKAPMSC 257
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M Y+ RY ER QF P+A+FQ+ Q+KL +ML I LV
Sbjct: 258 LDNARYGIAWGALGAAMDCYESARRYAMERIQFDKPIASFQLVQKKLAEMLTEITKAQLV 317
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T SL K A A E R++ GG GI ++ + + M
Sbjct: 318 CWRLGNLKNEGKATSAQISLAKRNNVAMALEIAREARQMHGGMGITGEYSIMRHQM 373
>gi|167045380|gb|ABZ10036.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
[uncultured marine microorganism HF4000_APKG10F13]
Length = 388
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 190/355 (53%), Gaps = 2/355 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P D+Y + LT EE+ VR VR+ E+ + P++ E++ FP ++P++G + +
Sbjct: 3 PYSGVDFYNLEQHLTEEERMVRDTVRDWTEENVLPVIEEHYMAGTFPMDLVPQIGKMGLF 62
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G ++ YGC G S + E+ R D++ +F+ V SL+M I GSE+QK+KYLP
Sbjct: 63 GCNLEDYGCAGLSNVAYGLVCQELERGDSALRSFVSVQGSLSMYPIHAFGSEDQKKKYLP 122
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+A I C+ LTEP +GSD S + T A ++L G K WI N T AD+ +++A+
Sbjct: 123 GMATGELIGCFGLTEPDHGSDPSRMETKAIANGDDYVLNGAKMWITNGTIADLAIVWAK- 181
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+I G++++K+ G + +++ K LR +++L+ +P LP V+ +
Sbjct: 182 -LDGKIRGFIIEKNDEGFSAPEMKGKHSLRASVTSELVLQDCRIPGGRLLPNVSGLKGPL 240
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + W +G +MG Y +Y K R FG P+ +FQ+ QQKL ML I
Sbjct: 241 SCLTQARYGIVWGALGAAMGCYHASVKYAKSRIMFGKPIGSFQLVQQKLAWMLREITKGQ 300
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ + L + +K +P SLGK A + R++ G NGIL+++ + +
Sbjct: 301 LLAYHLGRAKDKDEASPEMVSLGKMNNVDVALSIARMARDIHGANGILNEYPIMR 355
>gi|344923743|ref|ZP_08777204.1| acyl-CoA dehydrogenase [Candidatus Odyssella thessalonicensis L13]
Length = 401
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 192/351 (54%), Gaps = 1/351 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD +D LT E+ +R + + ++ P + E + EF H++ ++G+L + G TI
Sbjct: 20 SDPLLLEDQLTDMERMIRDTAQAYAQDKLMPRILEANRREEFDPHIMKEMGSLGLLGVTI 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC + EI RVD++ + + V SSL M I GSE+Q+QKYLP LA
Sbjct: 80 DGYGCTDAGYVSYGLIAREIERVDSAYRSAMSVQSSLVMYPIYAYGSEDQRQKYLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD S++ T AT +GG++L+G K WI N+ A V+V++A+ N
Sbjct: 140 GEFIGCFGLTEPDSGSDPSSMRTRATATQGGYLLKGSKMWITNAPLAQVMVVWAK-CEDN 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G+++++ GL+ KIE K+ LR G+I++ VFVP+E+ LP V + L
Sbjct: 199 KIRGFILEQGMAGLSTPKIEGKMSLRASVTGEIVMDNVFVPEENLLPNVEGIKGPFGCLN 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R ++W +G + + Y ER+QF PLAA Q+ Q+KL M I +
Sbjct: 259 NARYGISWGALGAAEFCWHAARTYTMEREQFNRPLAATQLIQKKLADMQTEITLALQACL 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R +L +G P S+ K +A + L R++ GGNGI+ ++ V +
Sbjct: 319 RAGRLKNEGYDVPEVISMLKRNSCGKALDIARLARDMHGGNGIVDEYHVIR 369
>gi|407781561|ref|ZP_11128779.1| acyl-CoA dehydrogenase domain-containing protein [Oceanibaculum
indicum P24]
gi|407207778|gb|EKE77709.1| acyl-CoA dehydrogenase domain-containing protein [Oceanibaculum
indicum P24]
Length = 406
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 194/367 (52%), Gaps = 1/367 (0%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P A A + D DD LT +E+ V+ R E+++ + E + F ++
Sbjct: 11 PAAGKAHRPSFSWEDPLLLDDALTEDERMVQDAARAFCEEKLMTRVQEAFRHEVFHREIM 70
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LG G TI GYGC G + + E+ RVD+ + + V SSL M I GS
Sbjct: 71 NELGEQGFLGSTIDGYGCAGVNYVCYGLVAREVERVDSGYRSAMSVQSSLVMHPIHAYGS 130
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
E Q+QKYLP LA + C+ LTEP +GSD ++ T A KV+GG+++ G K WI NS A
Sbjct: 131 EAQRQKYLPKLATGEWVGCFGLTEPDHGSDPGSMKTRAKKVDGGYVISGAKMWITNSPIA 190
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV V++ + T I G++++K GL+ KIE K LR G+I++ +VFVP+E+ LP
Sbjct: 191 DVFVVWGK-TEDGVIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDEVFVPEENLLP 249
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
V + L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL
Sbjct: 250 NVEGLKGPFGCLNKARYGIAWGALGAAEFCWHAARQYTLDRKQFGRPLAANQLVQKKLAD 309
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M I + RL +L ++G P SL K ++ + + R++ GGNG+ ++
Sbjct: 310 MQTEITLGLHSCLRLGRLMDEGRAAPEMISLLKRNNCGKSLDIARVARDMHGGNGVSDEY 369
Query: 393 LVAKVIM 399
V + +M
Sbjct: 370 HVIRHVM 376
>gi|17534353|ref|NP_496469.1| Protein F54D5.7 [Caenorhabditis elegans]
gi|2492633|sp|Q20772.1|GCDH_CAEEL RecName: Full=Probable glutaryl-CoA dehydrogenase, mitochondrial;
Short=GCD; Flags: Precursor
gi|3877512|emb|CAA91333.1| Protein F54D5.7 [Caenorhabditis elegans]
Length = 409
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 194/353 (54%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 24 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQ 83
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I GSE+QKQKY+P LA
Sbjct: 84 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASG 143
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS +DV+V++AR+
Sbjct: 144 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSARH 203
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP Q
Sbjct: 204 NNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNAEGLQGPFGC 263
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +AW +G + + + +Y +R+QFG PLA Q+ Q K+ ML I +
Sbjct: 264 LNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQG 323
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G + S+ K +A E R++LGGNGI+ ++ + +
Sbjct: 324 CLRVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDMLGGNGIVDEYHIMR 376
>gi|295132389|ref|YP_003583065.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
gi|294980404|gb|ADF50869.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
Length = 391
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 186/357 (52%), Gaps = 2/357 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
A DYY DDLL+ E + VR R ++KE++PI+ + +KAEFP ++ L + G
Sbjct: 7 TAPDYYNLDDLLSDEHKMVREATRAWVKKELSPIIEDAAQKAEFPKTLLKGLADIGAFGP 66
Query: 104 TI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
I + YG G I + EI R D+ + V SSL M I GSEEQK+KYLP
Sbjct: 67 YIPEDYGGAGLDQISYGIIMQEIERGDSGIRSTASVQSSLVMYPIYAYGSEEQKKKYLPK 126
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
LA I C+ LTEP +GS+ + T ++L G K WI N+ FAD+ V++A+N
Sbjct: 127 LAAGELIGCFGLTEPDFGSNPGGMLTNFKDKGDHYLLNGAKLWISNAPFADIAVVWAKNE 186
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I+G +V++ G + + NK LR G+++ V +P E+ LP N
Sbjct: 187 E-GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFNNVKIPKENLLPQKNGLGAPLG 245
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW IG +M YD RY KER QFG P+A Q+ Q+KL +M+ I L
Sbjct: 246 CLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAEKQLQQKKLAEMITEITKAQL 305
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ WRL L +G + S+ K A + R++LG GI ++ + + +M
Sbjct: 306 LAWRLGTLKNEGKASSAQISMAKRNNVDMALKIAREARQVLGAMGITGEYSIMRHMM 362
>gi|373109005|ref|ZP_09523285.1| hypothetical protein HMPREF9712_00878 [Myroides odoratimimus CCUG
10230]
gi|423129326|ref|ZP_17117001.1| hypothetical protein HMPREF9714_00401 [Myroides odoratimimus CCUG
12901]
gi|371645699|gb|EHO11221.1| hypothetical protein HMPREF9712_00878 [Myroides odoratimimus CCUG
10230]
gi|371649089|gb|EHO14571.1| hypothetical protein HMPREF9714_00401 [Myroides odoratimimus CCUG
12901]
Length = 392
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL++E + +R R ++KE++PI+ ++ ++AEFP +IP L + G
Sbjct: 8 APDYYLLDDLLSNEHKLIRDTARAWVKKEVSPIIEDFAQRAEFPKQLIPGLAEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGIRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEYIGCFGLTEPDHGSNPGGMLTNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP + LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L ++G T S+ K A A + R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRDEGRATSAQISMAKRNNVAMALDIARDARQMLGGMGITGEYSIMRHMM 362
>gi|340383969|ref|XP_003390488.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like
[Amphimedon queenslandica]
Length = 415
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 192/368 (52%), Gaps = 4/368 (1%)
Query: 35 ATPASKFPPCASDY---YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
+ P S P D+ Q L+ EE+ V+ E ++ +AP + E K F +
Sbjct: 20 SEPRSSKPKTGFDWPDPLQLAGALSDEERMVQQSAHEYAQRALAPRILEAHRKEYFDPAI 79
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+ ++G + + G TI GYGC G G + EI RVD+ + + V SSL M I G
Sbjct: 80 LREMGEIGLLGSTIDGYGCAGIGYVGYGLVAREIERVDSGYRSAMSVQSSLVMHPIHAFG 139
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTF 211
SEEQ++KYLP LA+ + C+ LTEP GSD ++ T A +V+GG+ L G K WI +
Sbjct: 140 SEEQREKYLPRLAKGELVGCFGLTEPDAGSDPGSMRTRARRVDGGFRLSGGKTWISLAPI 199
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
AD++V++A+N ++I G+++++ GL IE K LR G ILL VFVP L
Sbjct: 200 ADIMVVWAKN-DEDEIRGFVLERGMKGLETPTIEGKFSLRSSITGQILLDDVFVPAAAEL 258
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
GV + L +R +AW +G + + Y ER+QFG PLAA Q+ Q+KL
Sbjct: 259 QGVRGLKGPFSCLTRARYGIAWGALGAAEFCWHAARGYTLERRQFGRPLAANQLIQKKLA 318
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
M I + RL +L+++G S+ K +A E L R++ GGNGI +
Sbjct: 319 DMQTEIAIGLAACLRLGRLFDEGRAAHEAVSMLKRNSAGKALEIARLARDMHGGNGIADE 378
Query: 392 FLVAKVIM 399
+ V + +M
Sbjct: 379 YHVIRHLM 386
>gi|298245188|ref|ZP_06968994.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
44963]
gi|297552669|gb|EFH86534.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
44963]
Length = 397
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 191/354 (53%), Gaps = 2/354 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P A+D Y D LL+ EE+ VR VR+ + + + PI+ +++E FP +IP++ L + G
Sbjct: 13 PSATDLYNIDHLLSDEERMVRDTVRKFVRERVLPIIDQHFEAGTFPRELIPEIAELGLLG 72
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ GYGC G S +A E+ D+ +F+ V SLAM I GSEEQK+ +LP
Sbjct: 73 MHLDGYGCAGLSAVCYGLACQELEAGDSGLRSFVSVQGSLAMYPIYAFGSEEQKEHWLPR 132
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A+ I C+ LTEP +GS+A+ + T+A + +IL G K WI N AD+ V++AR
Sbjct: 133 MARGEVIGCFGLTEPDFGSEAAGMRTSARRDGDEYILNGTKMWITNGGVADLAVVWAR-- 190
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G+LV++ PG T + I +K+ LR ++ ++ VP + LP V +
Sbjct: 191 AEDGIRGFLVERGTPGFTTSDIHHKLSLRASVTSELHFEECRVPASNMLPNVKGMRGPLS 250
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R ++W G + ++ Y K R QF P+A+FQ+ Q+KL M + L
Sbjct: 251 CLNEARFGISWGVTGAARACFETALEYAKTRVQFKRPIASFQLVQRKLALMATELVKAQL 310
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L ++ + P SL K A ET R +LG NGI ++ +++
Sbjct: 311 LTLQLGRLKDEELLHPVQISLAKRNNCREALETAREARSILGANGITLEYPISR 364
>gi|298290808|ref|YP_003692747.1| acyl-CoA dehydrogenase domain-containing protein [Starkeya novella
DSM 506]
gi|296927319|gb|ADH88128.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506]
Length = 412
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 193/353 (54%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + D LT EE+ VR R+ ++++AP + + + F ++ ++G L + G TI
Sbjct: 27 SDPFHLDGQLTEEERLVRDTARDYAQEKLAPRVTSAFMEERFDREIMNEMGELGLLGPTI 86
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + E+ RVD+ + + V SSL M I G+E QK+++LP LA
Sbjct: 87 PEEYGGAGLGYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPINAYGTEAQKKRFLPKLA 146
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP GSD + + T A K++GG+ L G K WI NS ADV V++A++
Sbjct: 147 TGEWIGCFGLTEPDAGSDPAGMRTRAEKIDGGYRLTGSKMWITNSPIADVAVVWAKSAAH 206
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N I G+LV++ A G + KIENK+ LR G+I+L V VP+E LPG + +
Sbjct: 207 DNDIRGFLVERGAKGFSTPKIENKLSLRASITGEIVLDGVEVPEESLLPGASGLKGPFGC 266
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W IG + Y +Y +RKQFG PLAA Q+ Q+KL M I + +
Sbjct: 267 LNRARFGIGWGTIGAAEACYASARQYTLDRKQFGKPLAATQLIQKKLADMATEIALGLQL 326
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R +L+++G + S+ K +A + L R++ GGNGI ++F V +
Sbjct: 327 ALRAGRLFDEGQLPVEAISMLKRNNCGKALDIARLARDMHGGNGISAEFPVMR 379
>gi|86141700|ref|ZP_01060224.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
gi|85831263|gb|EAQ49719.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
Length = 392
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + VR R+ ++++++PI+ E +KAEFP +I L + G
Sbjct: 8 APDYYNLDDLLTEEHKLVRSAARDWVKRDVSPIIEEAAQKAEFPKEIIKGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+E Q++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFKFGTEVQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI N+ FAD+ V++A++ +
Sbjct: 128 ASGEFMGCFGLTEPDHGSNPGGMVTNFKDKGDHYLLNGAKMWISNAPFADIAVVWAKDES 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + NK LR G+++ V +P E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPTTHNKWSLRASATGELIFDNVKIPKENLLPNKSGLGAPLMC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER+QFG P+ +FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYAKEREQFGKPIGSFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AWRLGALRNEDKATSAQISMAKRNNVEMALKIAREARQILGGMGITGEYSIMRHMM 362
>gi|336324864|ref|YP_004604830.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
gi|336100846|gb|AEI08666.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
Length = 442
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 183/349 (52%), Gaps = 3/349 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGG 103
A D FD LLT+ E + R +R+ +++ P + ++++ E P ++ G L V G
Sbjct: 59 ALDLAGFDSLLTNSEVSTRQAIRDFGTRQLRPHIEQWFDSGEPPTKDLMAHFGQLDVLGM 118
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
++GYGCPG S +A EI VD+ + + V SLAM I GSEEQK+KYLP L
Sbjct: 119 HLEGYGCPGGSAVEYGLACMEIEAVDSGLRSMVSVQGSLAMFAIRHWGSEEQKEKYLPRL 178
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP GSD +++ A + W+L G K WI NS ADVLV++ R T
Sbjct: 179 ATGELVGCFGLTEPGAGSDVASMQMHAKREGNEWVLNGSKMWITNSPIADVLVVWTR--T 236
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ G++V++ P L +I K+ LR G+I+L + D RLP VNS +
Sbjct: 237 EDGHAGFIVERGTPDLNTPEIRRKLSLRASITGEIVLDDCHISDAQRLPKVNSLRGPLTC 296
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W +G + Y ER FG PL++FQ+ Q KL M + +L+
Sbjct: 297 LNEARYGIIWGALGAARDSLQTTLEYTAERPVFGRPLSSFQLTQAKLADMAVELNKSMLL 356
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+L +L ++G + P H S GK T A + R LLG GI +++
Sbjct: 357 ALQLGRLKDRGELRPHHISAGKLNSTRVALDIARECRTLLGAAGITTEY 405
>gi|400287638|ref|ZP_10789670.1| glutaryl-CoA dehydrogenase [Psychrobacter sp. PAMC 21119]
Length = 394
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 190/353 (53%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT EE+ V R+ +KE+ P + E F +++ ++G + + G TI+
Sbjct: 13 DPFLLRDQLTEEERMVTDSARQFFQKELMPGIVEANRNENFDRNIMRQMGEMGLLGVTIE 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ VD+ + + V SSL M I G+EEQ+++YLP LA
Sbjct: 73 GYGCAGLSSVAYGLIAKEVEAVDSGYRSAMSVQSSLVMHPIWAYGTEEQRERYLPKLASG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP GSD S+++T A V+GG+ L G K WI NS ADV V++A++ +
Sbjct: 133 EYVGCFGLTEPDSGSDPSSMSTRARAVDGGYELTGNKMWITNSPIADVFVVWAKD-DAGE 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+++ K GL+ KIE K LR G+I++ KVFVP+ + P + + L
Sbjct: 192 IRGFVLDKGMKGLSAPKIEGKFSLRASVTGEIVMDKVFVPEANAFPDIRGLKGPFGCLNK 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + +Y +RKQFG PLAA Q+ Q KL M I + R
Sbjct: 252 ARYGIAWGSMGAAEFCWKAARQYTLDRKQFGRPLAATQLVQLKLANMQTEITLGLQAALR 311
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ P SL K +A + + R++ GGNGI +F + + +M
Sbjct: 312 VGRLMDEDNAAPEMISLIKRNNCGKALDIARIARDMHGGNGISDEFHIIRHVM 364
>gi|296134748|ref|YP_003641990.1| acyl-CoA dehydrogenase [Thiomonas intermedia K12]
gi|295794870|gb|ADG29660.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
Length = 393
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 196/353 (55%), Gaps = 4/353 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D Q D L+++E+AVR + + ++AP +++ + + P + ++GAL + G T
Sbjct: 11 DDALQLDAQLSADERAVRDAAQAYCQDQLAPRVLSAFRHETTDP-TIFREMGALGLLGPT 69
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + G + E+ RVD+ + + V SSL ML I GSE KQKYLP L
Sbjct: 70 IPEAYGGAGLNYVGYGLIAREVERVDSGYRSMMSVQSSLVMLPIFAFGSEAMKQKYLPKL 129
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A+ I C+ LTEP +GSD ++T A V GG+ L G K WI NS ADV V++A++
Sbjct: 130 ARGEWIGCFGLTEPDHGSDPGGMSTRARAVPGGYALNGNKMWISNSPIADVFVVWAKDDA 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G+++ K A GL+ + K+GLR G+I++ +VF P+E+ P V +
Sbjct: 190 -GEIRGFVLDKGAKGLSAPAVHGKVGLRTSITGEIVMDQVFCPEENAFPTVCGLKGPFTC 248
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + Y +Y+ +RKQFG PLAA Q+ Q+KL M +I +
Sbjct: 249 LNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLVQKKLADMATDISLGLQG 308
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G P SL K +A + R++LGGNGI +F VA+
Sbjct: 309 VLRLGRMKDEGTAAPEVTSLLKRNNCGKALDIARTARDMLGGNGISDEFGVAR 361
>gi|423132989|ref|ZP_17120636.1| hypothetical protein HMPREF9715_00411 [Myroides odoratimimus CIP
101113]
gi|371649746|gb|EHO15223.1| hypothetical protein HMPREF9715_00411 [Myroides odoratimimus CIP
101113]
Length = 392
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + +R R ++KE++PI+ ++ ++AEFP +IP L + G
Sbjct: 8 APDYYLLDDLLSDEHKLIRDTARAWVKKEVSPIIEDFAQRAEFPKQLIPGLAEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGIRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEYIGCFGLTEPDHGSNPGGMLTNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP + LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L ++G T S+ K A A + R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRDEGRATSAQISMAKRNNVAMALDIARDARQMLGGMGITGEYSIMRHMM 362
>gi|390954332|ref|YP_006418090.1| acyl-CoA dehydrogenase [Aequorivita sublithincola DSM 14238]
gi|390420318|gb|AFL81075.1| acyl-CoA dehydrogenase [Aequorivita sublithincola DSM 14238]
Length = 392
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 185/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LL+ E + VR R+ ++++++PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYNLDELLSEEHKLVRQAARDWVKRDVSPIIEEYAQKAEFPSQIIKGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI N+ FA V V++A+N
Sbjct: 128 ASGEWMGCFGLTEPDHGSNPGGMTTNFKDKGDHYLLNGAKMWISNAPFAQVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERMQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WR+ + G T S+ K A R++LGG GI ++ + + M
Sbjct: 307 AWRVGVMRNAGTATSAQISMAKRNNVDMAINIAREARQMLGGMGITGEYSIMRHSM 362
>gi|209963490|ref|YP_002296405.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
gi|209956956|gb|ACI97592.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
Length = 404
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 191/370 (51%), Gaps = 2/370 (0%)
Query: 30 VAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF 89
PQ TP P D + DD L+ EE+ VR R + + + E + F
Sbjct: 7 TGLPQKTPKGS-PFRWEDPLRLDDQLSEEERMVRDSARAYCQDRLMGRVLEAFRHEHFHR 65
Query: 90 HVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
++ ++G L + G TI GYGC G + + E+ RVD+ + + V SSL M I
Sbjct: 66 EIMAEMGELGLLGVTIDGYGCAGLNHVCYGLVAREVERVDSGYRSAMSVQSSLVMHPIHA 125
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209
GSEEQ+Q++LP LA + C+ LTEP GSD ++ T A KV GGW L G K WI NS
Sbjct: 126 YGSEEQRQRWLPGLASGTLVGCFGLTEPDAGSDPGSMKTRARKVAGGWTLSGSKTWITNS 185
Query: 210 TFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
AD+ V++A++ + I G++++K GL+ KIE K LR G I++ +VFVP+E+
Sbjct: 186 PIADIFVVWAKDEAGD-IRGWVLEKGMAGLSAPKIEGKFSLRASVTGMIMMDEVFVPEEN 244
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
LPG L +R +AW +G + + +Y +R+ FG PLAA Q+ Q+K
Sbjct: 245 LLPGAKGLSGPFGCLNKARYGIAWGAMGAAEFCWHAARQYTLDRQMFGRPLAATQLIQKK 304
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L M I + L ++ + G P SL K +A + + R++ GGNGI
Sbjct: 305 LADMQTEIALGLQGALALGRMLDAGTWAPEAISLMKRNNCGKALDIARVARDMHGGNGIA 364
Query: 390 SDFLVAKVIM 399
++ V + ++
Sbjct: 365 DEYHVIRHVL 374
>gi|456371236|gb|EMF50132.1| Long-chain-acyl-CoA dehydrogenase [Streptococcus parauberis
KRS-02109]
Length = 401
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 187/355 (52%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D F LT E ++RE +E + P++ W KAE P +G + +
Sbjct: 14 EDVMGFAQELTEGEIKKLTQIRELLETKYRPLVNNCWMKAEVPEDFFKDMGKMNYLNDPL 73
Query: 106 KGYGCPG---HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G G S A E++R D S +TF+ VH L T GSEEQ + Y+P
Sbjct: 74 LFEGRDGAKRRSEMYFAFMCYELSRFDISMNTFVGVHIGLGHNTFLFGGSEEQVKYYIPK 133
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFARN 221
L + C+ALTEP +GSD + TT K +G WIL G+KRWIG ADV+ +FAR+
Sbjct: 134 LQSHELMTCFALTEPEHGSDVAGGLTTTAKYDGENWILNGEKRWIGGGAMADVVPVFARD 193
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T+Q+ ++V+K G T IENKI LRIV N ++ LK V VP+ RL +N F+D +
Sbjct: 194 VDTDQVKCFIVEKGQEGFTADVIENKIALRIVPNANLHLKDVKVPESKRLQNINGFKDVA 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
K+L + VA G G +Y+ +RKQFG ++ +Q+ Q+KL M N + +
Sbjct: 254 KILYSTLAGVAAMAAGGMGGALQATLKYVTQRKQFGKEISNYQLVQEKLAMMQANTMSGL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L ++ E G + S+ K + R RETVA+GR + GGNGI D+ +A+
Sbjct: 314 AYSTQLARMQESGQYSEIATSMAKMFNALRLRETVAMGRGICGGNGITVDYDIAR 368
>gi|256822431|ref|YP_003146394.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
koreensis DSM 16069]
gi|256795970|gb|ACV26626.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
16069]
Length = 392
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 189/354 (53%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D+ LT EE+ +R R+ ++ + P + E F ++ +LG L + G TI
Sbjct: 10 DDILLLDEQLTEEERMIRDAARDYCQERLMPRVLEANRHEIFDREIMTELGELGLLGSTI 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S + E+ RVD+ + + V SSL M I G+E QK+K+LP LA
Sbjct: 70 DGYGCAGASYVAYGLVAREVERVDSGYRSALSVQSSLVMHPINAYGTEAQKEKFLPKLAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ T A KV+GG+ L G K WI NS ADV +++ ++
Sbjct: 130 GEWVGCFGLTEPDSGSDPASMKTRAKKVDGGYRLTGNKMWITNSPIADVFIVWGKD-DEG 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KIE K LR G+I++ VFVP+E++ P + + L
Sbjct: 189 EIRGFILEKGMEGLSAPKIEGKFALRASITGEIVMDNVFVPEENKFPEIKGLKGPFGCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
V+R ++W +G + + +Y +RKQF PLA+ Q+ Q+KL M I +
Sbjct: 249 VARYGISWGALGAAEFCWHAARQYGLDRKQFNKPLASMQLFQKKLADMQTEISLGLQGAL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++ P SL K +A + + R++ GGNGI +F V + M
Sbjct: 309 RVGRLIDEKRFKPEMISLVKRNSCGKALDIARMARDMHGGNGIADEFHVIRHAM 362
>gi|375006380|ref|YP_004975164.1| glutaryl-CoA dehydrogenase [Azospirillum lipoferum 4B]
gi|357427638|emb|CBS90583.1| glutaryl-CoA dehydrogenase [Azospirillum lipoferum 4B]
Length = 392
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 193/352 (54%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ VR R + + P + + + F ++ ++G L + G TI
Sbjct: 8 DAFLLEAQLTEDEKLVRDSARAYCQDRLQPRVISAFREERFDREIMSEMGELGLLGPTIP 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG S + E+ RVD+ + + V SSL M I GSEEQK+K+LP LA
Sbjct: 68 EEYGGPGVSHVAYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQKKKWLPRLAT 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTTT 224
+ C+ LTEP +GSD + T ATKV+GG++L G K WI NS AD+ V++A+ +
Sbjct: 128 GELVGCFGLTEPDHGSDPGGMKTRATKVDGGYLLSGSKMWITNSPIADLAVVWAKSDAHD 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N+I G++V++ G + KIE K+ LR G+I+L + FVPDE+ LP V+ L
Sbjct: 188 NKIKGFVVERGTKGFSTPKIEGKLSLRASVTGEIVLDEAFVPDENLLPNVSGLGGPFGCL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y +RKQFG PLA Q+ Q+KL M+ I +
Sbjct: 248 NKARYGIAWGVMGAAEFCWHAARQYTLDRKQFGRPLAQTQLVQKKLADMMTEIALGLQAA 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ + G+ +P SL K +A + + R++ GGNGI +F V +
Sbjct: 308 LRVGRMMDDGSWSPEAISLIKRNNCGKALDIARVARDMHGGNGISEEFQVIR 359
>gi|375099303|ref|ZP_09745566.1| acyl-CoA dehydrogenase [Saccharomonospora cyanea NA-134]
gi|374660035|gb|EHR59913.1| acyl-CoA dehydrogenase [Saccharomonospora cyanea NA-134]
Length = 394
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 187/351 (53%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D+ D LT++E+ +R VR + E++P +A+++E A P + K G L V G +
Sbjct: 10 DFLGVDAELTADERDIRDTVRRFAKAELSPHVADWYENATLPARDLAKSFGRLGVLGMHL 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YGC G S +A E+ VD+ +F+ V SLAM I GSEEQK+++LP+LA
Sbjct: 70 TDYGCAGSSAVAYGVACRELEAVDSGLRSFVSVQGSLAMYAIHRYGSEEQKRQWLPALAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD +++ T A + W+L+G K WI N T ADV V++A+ T +
Sbjct: 130 GEAIGCFGLTEPDAGSDPASMRTRARRDGADWVLDGTKMWITNGTVADVAVVWAQ--TDD 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G++V D PG + +I K+ LR +++L V +P + LPGV + L
Sbjct: 188 GVRGFVVPTDTPGFSAHEITRKLSLRASVTAELVLDGVRLPSDAALPGVTGLRGPLSCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + Y+ Y R QFG PLAA+Q+ Q+KL ++ + LV
Sbjct: 248 EARFGIVFGVVGAARTCYETALEYTTTRTQFGQPLAAYQLTQRKLADLVVEVNRAGLVAL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + GA+ S GK A + R +LG NGI ++ V +
Sbjct: 308 RLGRLKDSGALHHSQVSFGKLANVRAALDVARTARSMLGANGISLEYPVMR 358
>gi|288962491|ref|YP_003452786.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
gi|288914757|dbj|BAI76242.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
Length = 392
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 192/353 (54%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + + LT +E+ VR R + + P + + + F ++ ++G L + G TI
Sbjct: 7 DDAFLLESQLTEDEKLVRDSARAYCQDRLQPRVISAFREERFDREIMAEMGELGLLGPTI 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG S + E+ RVD+ + + V SSL M I GSEEQK+K+LP LA
Sbjct: 67 PEEYGGPGVSHVAYGLVAREVERVDSGYRSAMSVQSSLVMHPIYSYGSEEQKKKWLPRLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
+ C+ LTEP +GSD + T ATKV+GG++L G K WI NS AD+ V++A++
Sbjct: 127 TGELVGCFGLTEPDHGSDPGGMKTRATKVDGGYLLSGSKMWITNSPIADLAVVWAKSEAH 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G++V++ G + KIE K+ LR G+I+L + FVPDE+ LP V
Sbjct: 187 DNKIKGFVVERGTKGFSTPKIEGKLSLRASVTGEIVLDEAFVPDENLLPNVTGLGGPFGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y +RKQFG PLA Q+ Q+KL M+ I +
Sbjct: 247 LNKARYGIAWGVLGAAEFCWHAARQYTLDRKQFGRPLAQTQLVQKKLADMMTEITLGLQA 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ + G+ +P SL K +A + + R++ GGNGI +F V +
Sbjct: 307 ALRVGRMMDDGSWSPEAISLIKRNNCGKALDIARVARDMHGGNGISEEFQVIR 359
>gi|328951098|ref|YP_004368433.1| glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328451422|gb|AEB12323.1| Glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 386
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DYYQ +L T EE+ V+ R+ +E E P +A++WE+ FP H+IP+ G + G +
Sbjct: 3 DYYQVAELFTPEERQVQAAARKFLEAEALPHIAQWWEEGVFPKHLIPRFGEMGFLGANLP 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG S + + E+ RVD+ +F V +L M I GSEEQKQ+YLP LA
Sbjct: 63 SAYGAAEVSNVAYGLIMYELERVDSGLRSFASVQGALVMYPIYAFGSEEQKQRYLPELAA 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD A T + +G ++L G K WI N AD+ +I+A++
Sbjct: 123 GRLVGCFGLTEPDGGSDPDANMKTRARRDGDHYVLSGTKMWITNGNIADIAIIWAKDEE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V DAPG T ++++K+ LR +++L +V V + LP + L
Sbjct: 182 GVVRGFIVPTDAPGFTANEVKHKMSLRASVTSELVLDEVRVHKDQMLPKAQGLRAPLACL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + R FG P+AA Q+ Q KLV+ML +L+
Sbjct: 242 TQARYGIAWGAMGALEAVYTEALEFASSRVTFGRPIAARQMVQHKLVEMLTAHTQGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L + G +T SL K A + RE+LGGNGI ++
Sbjct: 302 WRLGRLKDAGRLTYTQVSLAKRQNVRAALQAARTAREILGGNGITLEY 349
>gi|238026355|ref|YP_002910586.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
gi|237875549|gb|ACR27882.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
Length = 395
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 193/353 (54%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D L+ +E+ +R R + ++AP + E + + + ++G + + G TI
Sbjct: 10 DPLLLDQQLSDDERMIRDAARAYAQGKLAPRVVEAFRHEKTDTTIFREMGEIGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ R+D+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 EQYGGPGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINAFGSEAQKQKYLPKLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTT 223
I C+ LTEP +GSD ++T A V GG++L G K WI NS ADV +++A+
Sbjct: 130 GEWIGCFGLTEPDHGSDPGGMSTRAKPVPGGYVLSGAKMWITNSPIADVFIVWAKLEENG 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+RLPGV +
Sbjct: 190 EDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENRLPGVKGLRGPFTC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 LDSARYGISWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQG 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A E L R++LGGNGI +F VA+
Sbjct: 310 VLRLGRMKDEGTAAVEITSIMKRNSCGKALEVARLARDMLGGNGISDEFGVAR 362
>gi|408491481|ref|YP_006867850.1| glutaryl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
gi|408468756|gb|AFU69100.1| glutaryl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
Length = 392
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY+ DDLLT E + +R R+ ++++++PI+ E +KAEFP +I L + G
Sbjct: 8 APDYYEIDDLLTEEHRMIRQAARDWVKRDVSPIIEEAAQKAEFPKSIIKGLSNIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++K+LP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMFPIYEFGTEEQRKKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ S + T ++L G K WI NS F D+ V++A+N
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPSGMTTHFVDKGDHYLLNGAKMWISNSPFCDIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ + V VP E+ LPG +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKENLLPGKSGLGAPLLC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A +Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAGYQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L +G + S+ K A R++LGG GI ++ + + +M
Sbjct: 307 ALRLGQLKNEGKASTAQISMAKRNNVEMAIHIARESRQILGGMGITGEYSIMRHMM 362
>gi|374619427|ref|ZP_09691961.1| acyl-CoA dehydrogenase [gamma proteobacterium HIMB55]
gi|374302654|gb|EHQ56838.1| acyl-CoA dehydrogenase [gamma proteobacterium HIMB55]
Length = 394
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 188/350 (53%), Gaps = 1/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ D LT E++ VR R+ + +AP + + E ++ ++G + + G TI+
Sbjct: 14 DPFELDAQLTEEQRMVRESARQYAQDRLAPRVTAAFRHEETDPNIFREMGEVGLLGPTIE 73
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + E+ RVD+ + + V SSL M I G++ Q++KYLP LA
Sbjct: 74 GYGCPGVDYVSYGLIAREVERVDSGYRSMLSVQSSLVMYPIFAYGTDAQREKYLPKLATG 133
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + T A EGG+ + G K WI NS ADV V++A+ T
Sbjct: 134 EWIGCFGLTEPDHGSDPGGMITRARSTEGGYRVTGAKMWISNSPIADVFVVWAK-TDDGV 192
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GL+ KIE K+ LR G+I++ VFVP+E+ LP V+ + L
Sbjct: 193 IRGFVLEKGMEGLSAPKIEGKLALRASITGEIVMDDVFVPEENLLPNVSGLKGPFGCLNN 252
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + Y +RKQFG PLAA Q+ Q+KL M I + R
Sbjct: 253 ARYGIAWGTLGAAETCWHAALDYTLDRKQFGKPLAATQLVQKKLADMQTEIGIGLQSCLR 312
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ GA++P SL K +A + R++LGGNGI + V +
Sbjct: 313 AGQMLSDGAISPDLISLIKRNSCGKALDIARTARDMLGGNGISDQYPVMR 362
>gi|296271158|ref|YP_003653790.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
bispora DSM 43833]
gi|296093945|gb|ADG89897.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
43833]
Length = 392
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 180/354 (50%), Gaps = 2/354 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P D+ + LL+ EE+ + VRE + I P +A ++E+ EFP + + G L + G
Sbjct: 8 PDPRDFLGVEKLLSDEERMIAHTVREFVTDRILPEVAGWFERGEFPRELATEFGELGLLG 67
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ GYGC G + A E+ D+ +F+ V SLAM I GSEEQKQ++LP
Sbjct: 68 MHLSGYGCAGLNAVSYGTACLELEAGDSGLRSFVSVQGSLAMFPIWKYGSEEQKQEWLPR 127
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A I C+ LTEP GSD + + T A + W+L G K WI N + ADV +++AR
Sbjct: 128 MAAGEVIGCFGLTEPDAGSDPAGMRTVARRDGSDWVLNGTKMWITNGSIADVAIVWAR-- 185
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ G++V PG T + +K+ LR +++L V VP + LPG+ +
Sbjct: 186 ADEGVRGFIVDTKTPGFTANTVRHKMSLRASVTSELVLDNVRVPGDAVLPGIVGLKGPLS 245
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R + + +G + Y+ Y R QFG PLAAFQ+ Q KL ML + L
Sbjct: 246 CLNEARFGILFGAVGAARSCYEAALDYTLTRTQFGKPLAAFQLTQSKLADMLIRVNRAHL 305
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ L +L + G +TP S GK A+A R +LG NGI ++ V +
Sbjct: 306 LALHLGRLKDAGELTPAQISFGKKDNVAQALHVAREARAMLGANGITLEYPVIR 359
>gi|254777205|ref|ZP_05218721.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 398
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 187/362 (51%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D LL+ +E+AVR VR + + P +AE++E + P + +
Sbjct: 6 STKTPPAFDRYDPLGLDALLSDDERAVRDTVRGFCAEHVLPHVAEWFEIGDLPVRELARE 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 66 FGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIWNFGSEE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP +A + C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV
Sbjct: 126 QKRQWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLDGRKLWITNGSVADV 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + I G+LV D PG T I +K+ LR +++L V +PDE LPG
Sbjct: 186 AVVWA--GTDDGIRGFLVPTDTPGFTANTIHHKLSLRASITSELVLDDVRLPDEAMLPGA 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 244 TGLRGPLSCLSEARYGIIWGAMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 304 VELHKGQLLSLHLGRLKDSTGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 363
Query: 395 AK 396
+
Sbjct: 364 IR 365
>gi|254515690|ref|ZP_05127750.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
gi|219675412|gb|EED31778.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
Length = 411
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 189/357 (52%), Gaps = 9/357 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + + LT E++ VR + + ++ P + E + + ++G L + G TI
Sbjct: 31 DPFSLEAQLTDEQRMVRDTAAQYAQAKLQPRVKEAFRNENTDLAIFREMGELGLLGSTID 90
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG T + E+ RVD+ + + V SSL M I G+EEQ++KYLP LA
Sbjct: 91 GYGCPGVDYTSYGLVAREVERVDSGYRSMLSVQSSLVMYPIYAYGTEEQREKYLPKLATG 150
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP YGSD + T A V+GG+ + G K WI NS ADV V++A+ T +
Sbjct: 151 EWIGCFGLTEPDYGSDPGGMVTRARSVDGGYRISGAKMWISNSPVADVFVVWAK-TDDDV 209
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K GL+ KIE K+ LR G+I++ +VFV +E LP V + L
Sbjct: 210 IRGFVLEKGMEGLSAPKIEGKLALRASITGEIVMDEVFVSEEQLLPNVQGLKGPFGCLNN 269
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + Y ERKQF PLAA Q+ Q KL M Q I +G +
Sbjct: 270 ARYGIAWGALGAAEACWHAALNYTLERKQFDRPLAANQLVQLKLADM----QTEIALGLQ 325
Query: 347 LC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
C +L + GA+ P SL K +A R++LGGNGI ++ V + +M
Sbjct: 326 GCARAGQLMDAGAIAPDLISLIKRNSCGKALHVARQARDMLGGNGISDEYPVMRHMM 382
>gi|149280430|ref|ZP_01886550.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
gi|149228844|gb|EDM34243.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
Length = 396
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + +R RE +++E++P++ ++ ++AEFP H+I LG + G T
Sbjct: 12 APDYYLLDELLTEEHKLIRSSAREWVKQEVSPVIEDFAQRAEFPKHLIKGLGEIGAFGPT 71
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G I + EI R D+ + V SL M I G+EEQ++K+LP L
Sbjct: 72 IPVEYGGAGLDYIAYGILMQEIERGDSGIRSTASVQGSLVMYPIYTYGTEEQRRKFLPKL 131
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T ++L G K WI N+ F+D+ V++AR+
Sbjct: 132 ATGELMGCFGLTEPDHGSNPGGMVTNIKDQGDHYLLNGAKMWISNAPFSDIAVVWARDEN 191
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G + + NK LR G+++ V VP + P + +
Sbjct: 192 -GKIRGLIVERGMEGFSTPETHNKWSLRASATGELVFDNVKVPKANIFPDIMGLKGPLGC 250
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 251 LNQARYGIAWGALGAAMDCYDTALRYSKERVQFGKPIAGFQLQQKKLAEMITEITKAQLL 310
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + + S+ K A + R++LGG GI ++ + + +M
Sbjct: 311 VWRLGVLKSENRASAEQISMAKRNSVELALDVARNARQMLGGMGITGEYSIMRHMM 366
>gi|329939193|ref|ZP_08288567.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
gi|329302078|gb|EGG45971.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
Length = 396
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 186/358 (51%), Gaps = 6/358 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGAL 98
F P +D DDLL+ E++AVR VR+ + +AP +AE++E E P + +LG L
Sbjct: 10 FDP--ADPLGLDDLLSEEDRAVRAAVRDWTTRRVAPHIAEWYENGELPGIRELARELGDL 67
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQK+
Sbjct: 68 GALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKRH 127
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218
+LP +A I C+ LTEP +GSD + + T A + G W+L+G+K WI N + A V V++
Sbjct: 128 WLPRMAAGEVIGCFGLTEPDHGSDPAGMRTHARRDGGDWVLDGRKMWITNGSVAGVAVVW 187
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR T + I G+LV PG + +I +K LR +++L V +P E LP V +
Sbjct: 188 AR--TEDGIRGFLVPAGTPGFSAPEIRHKWSLRASVTSELVLDDVRLPAEAVLPEVTGLR 245
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL M +
Sbjct: 246 GPLSCLSHARYGIVWGAMGAARSCFESAVEYARTREQFGRPIGGFQLTQAKLADMAVELH 305
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
IL+ L + + G + P S GK A E R +LG NGI ++ V +
Sbjct: 306 KGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVMR 363
>gi|254284088|ref|ZP_04959056.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
gi|219680291|gb|EED36640.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
Length = 395
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 187/354 (52%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + + LT E++ VR + + ++ P + + ++K + + ++G L + G TI
Sbjct: 14 TDPFLLEQQLTDEQRMVRDSAHQYAQAKLLPRVRDAFQKEQTDPEIFREMGELGLLGSTI 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGCPG + E+ RVD+ + + V SSL M I GSE Q++KYLP LA
Sbjct: 74 DGYGCPGVDYVSYGLVAREVERVDSGYRSMLSVQSSLVMYPIHAFGSEAQREKYLPKLAT 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP YGSD + T A VEGG+ L G K WI NS ADV V++A+ T
Sbjct: 134 GEWIGCFGLTEPDYGSDPGGMVTRARTVEGGYSLTGAKMWISNSPIADVFVVWAK-TDDG 192
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K PGL+ KIE K+ LR G+I+++ V V ++ LPGV + L
Sbjct: 193 VIRGFVLEKGMPGLSAPKIEGKLSLRASITGEIVMEDVVVGEDAMLPGVEGLKGPFSCLN 252
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + Y ERKQF PLAA Q+ Q KL M I +
Sbjct: 253 NARYGIAWGALGAAETCWHAARDYTMERKQFNRPLAANQLIQLKLADMQTEISLGLQGCH 312
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R L + G + P SL K ++ E R++LGGNGI ++ V + +M
Sbjct: 313 RAGVLMDAGQIAPELISLIKRNSCGKSLEVARKARDMLGGNGISDEYPVMRHMM 366
>gi|333027259|ref|ZP_08455323.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
gi|332747111|gb|EGJ77552.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
Length = 395
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 183/352 (51%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGT 104
D DDLL+ EE+AVR VR+ + + P +AE++E E P + +LG+L + G
Sbjct: 13 DLAGIDDLLSPEEKAVRQAVRQVCDASVEPNIAEWYESGELPAVRELAKELGSLGLLGMH 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S +A E+ D+ + + V SLAM I GSEEQK+++LP +A
Sbjct: 73 LEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMYAIHRFGSEEQKREWLPRMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + T A + G W+L+G+K WI N + A V V++AR
Sbjct: 133 TGEAIGCFGLTEPDHGSDPGGMRTRARRAGGDWVLDGRKMWITNGSVASVAVVWAR--AE 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG + I++K LR ++LL V +P + LP V + L
Sbjct: 191 EGVRGFVVPTDTPGFSAPPIKHKGSLRASVTSELLLDGVRLPADAVLPEVTGLRGPLSCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y KER+QFG PLA FQ+ Q KL M + L+
Sbjct: 251 NEARYGILWGALGAARSCFRTALSYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P SLGK +A + R +LG NGI +F V +
Sbjct: 311 LHLGRRKDAVGLRPEQVSLGKLNNVNKALDIARTSRTILGANGISLEFPVMR 362
>gi|423328599|ref|ZP_17306406.1| hypothetical protein HMPREF9711_01980 [Myroides odoratimimus CCUG
3837]
gi|404605035|gb|EKB04651.1| hypothetical protein HMPREF9711_01980 [Myroides odoratimimus CCUG
3837]
Length = 392
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + +R R ++KE++PI+ ++ ++AEFP +IP L + G
Sbjct: 8 APDYYLLDDLLSDEHKLIRDTARAWVKKEVSPIIEDFAQRAEFPKQLIPGLAEIGGFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGIRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEYIGCFGLTEPDHGSNPGGMLTNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP + LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L ++G T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRDEGRATSAQISMAKRNNVTMALDIARDARQMLGGMGITGEYSIMRHMM 362
>gi|163753133|ref|ZP_02160257.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
gi|161326865|gb|EDP98190.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
Length = 392
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 186/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + VR RE ++++++PI+ +Y ++AEFP +I L + G
Sbjct: 8 APDYYNLDELLTDEHKLVRDAAREWVKRDVSPIIEDYAQRAEFPNQIIKGLADIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+E Q++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEAQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T + ++L G K WI NS F + V++A+N
Sbjct: 128 ASGEWMGSFGLTEPDHGSNPGGMTTNYKDMGDHYLLNGAKMWISNSPFCQIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L E G T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AWRLGVLRENGKATSAQISMAKRNNVEMALKIAREARQMLGGMGISGEYSIMRHMM 362
>gi|346471151|gb|AEO35420.1| hypothetical protein [Amblyomma maculatum]
Length = 422
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 6/357 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D + ++ LT +E+ VR VR+ + + P ++A E+ F +I +LG L V G T
Sbjct: 36 DAFLLEEQLTEDERLVRDTVRDYCQARLMPRVLLANRHER--FDRDIIRELGQLGVLGST 93
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S + E+ RVD+ + + V SSL ML I L G+EEQKQ+YLP LA
Sbjct: 94 LQGYGCAGTSYVAYGLTAREVERVDSGYRSTMSVQSSLVMLPIYLFGTEEQKQRYLPRLA 153
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWI--LEGQKRWIGNSTFADVLVIFARNT 222
Q + C+ LTEP +GS+ + T A I L G K WI NS ADV V++A+
Sbjct: 154 QGELLGCFGLTEPNHGSNPGGMETRARHDPAARIYTLNGSKTWITNSPEADVFVVWAKCE 213
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
I ++++K GLT +IE K LR G IL+ V VP++ LP + + +
Sbjct: 214 EDGVIRAFVLEKGTRGLTAPRIEGKFSLRASATGMILMDDVIVPEDALLPSSHGLKAAFQ 273
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R ++W +G + + +Y +R+QFG PLA+ Q+ Q+K+ M+ I +
Sbjct: 274 CLTSARYGISWGALGAAEFCLETARQYTLDRQQFGRPLASNQLMQKKMADMVTEISLGLQ 333
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L+++G+M P SL K +A + R++LGGNGI ++ + + +M
Sbjct: 334 ACLRVGRLFDQGSMCPEMVSLIKRNSCGKALDIARTARDMLGGNGISDEYHIIRHVM 390
>gi|319953442|ref|YP_004164709.1| glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
gi|319422102|gb|ADV49211.1| Glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
Length = 392
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + VR R+ +++ ++PI+ EY +KAEFP +I L + G
Sbjct: 8 APDYYNIDDLLSEEHKLVRDAARQWVKRSVSPIIEEYAQKAEFPKEIIGGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+E Q++KYLP L
Sbjct: 68 IPQEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYAYGNEAQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + T + ++L G K WI NS FAD+ V++A+N
Sbjct: 128 ASGEFMGCFGLTEPNHGSNPSGMETKYKDMGDHYLLNGAKLWISNSPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ L G
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENILLGKTGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLM 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L +G T S+ K A + R++LG GI ++ + + +M
Sbjct: 307 ALRLGQLKNEGKATTAQISMAKRNNVEMALKIAREARQVLGAMGISGEYSIMRHMM 362
>gi|383449540|ref|YP_005356261.1| glutaryl-CoA dehydrogenase [Flavobacterium indicum GPTSA100-9]
gi|380501162|emb|CCG52204.1| Glutaryl-CoA dehydrogenase [Flavobacterium indicum GPTSA100-9]
Length = 392
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 186/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY DDLL+ E + VR R ++KE++PI+ EY ++AEFP ++ LG + G
Sbjct: 8 SPDYYLLDDLLSEEHKLVRDAARAWVKKEVSPIIEEYAQRAEFPKQIVKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEWIGCFGLTEPDFGSNPGGMVTNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+ A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATSAQISMAKRNNVDMALTIARDARQMLGGMGITGEYSIMRHMM 362
>gi|257055769|ref|YP_003133601.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
gi|256585641|gb|ACU96774.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
Length = 396
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 187/359 (52%), Gaps = 5/359 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGA 97
PP D ++LLT +E+AV VR I P + E++E+ E P + +LG
Sbjct: 7 LPPLDPQDIAGLNELLTEDEKAVADSVRRLCADRIDPYIGEWFERGEIPDIRGLAKELGE 66
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L V G ++GYGC G S T IA E+ D+ + + V SLAM I GSEEQKQ
Sbjct: 67 LGVLGMHLEGYGCAGMSATQYGIACLELEATDSGLRSLVSVQGSLAMFAIWKWGSEEQKQ 126
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A I C+ LTEP GSD +++ T A + W+L+G+K WI N + ADV V+
Sbjct: 127 QWLPRMAAGEAIGCFGLTEPDVGSDPASMRTRARRDGSDWVLDGRKMWITNGSVADVAVV 186
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A+ T + G++V D PG + +I++K+ LR +++L V +P + LP V
Sbjct: 187 WAQ--TDEGVRGFVVPTDTPGFSAPEIKHKLSLRASVTSELVLDGVRLPADAVLPEVTGL 244
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + W +G + Y ER QFG P++AFQ+ QQKLV M
Sbjct: 245 KGPLSCLNEARFGIVWGAVGAARSCLQAAQSYAAERTQFGKPISAFQLTQQKLVDMNLEY 304
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L+ + L K + G + P SLGK A + R +LG NGI ++ V +
Sbjct: 305 TKALLLAFHLGKRKDAGTLRPEQISLGKLNNVREALQICRTARTILGANGISLEYPVIR 363
>gi|385678338|ref|ZP_10052266.1| acyl-CoA dehydrogenase domain-containing protein [Amycolatopsis sp.
ATCC 39116]
Length = 388
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 184/354 (51%), Gaps = 2/354 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P D DLL EE+ + VR + KE+A +++E A FP H++ +LG + + G
Sbjct: 4 PDPRDLLGIRDLLNEEEREIADTVRTFVRKEVADHAGQWFEDATFPRHLVGQLGEMGLLG 63
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ GYGC G S T +A E+ D+ +F+ V SLAM I GS+EQK ++LP+
Sbjct: 64 MHLTGYGCAGTSATAYGLACLELEAGDSGLRSFVSVQGSLAMFPIWKYGSDEQKDRWLPA 123
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A+ I C+ LTEP GSD + T A + G WIL G K WI N T ADV V++AR
Sbjct: 124 MARGEAIGCFGLTEPDRGSDPGDMRTFAKRDGGDWILNGSKMWITNGTLADVAVVWAR-- 181
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
T + G++V D PG T +I++K+ LR+ ++ + +P + LPGV +
Sbjct: 182 TDEGVRGFVVPTDTPGFTAREIKHKLSLRMSATAELSFDDLRLPGDAVLPGVTGLKGPLS 241
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L+ +R + + +G + Y+ Y R+QFG P+ FQ+ QQKLV M + +L
Sbjct: 242 CLSEARFGILFGALGAARTCYEAALDYASTREQFGRPIGGFQLTQQKLVGMALELNKGML 301
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ L + + G + P S GK A + R +L NGI ++ V +
Sbjct: 302 LAVHLGRRKDAGELPPELVSFGKLNNVRTAIDIARTARTILAANGISLEYPVLR 355
>gi|227536445|ref|ZP_03966494.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33300]
gi|227243700|gb|EEI93715.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33300]
Length = 386
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 195/354 (55%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DY+Q D+LLT E+ +R VRE + KEI P++ E ++ + ++ KLGA+ G I
Sbjct: 5 DYFQIDELLTEEQLMIRNTVREFVNKEIRPVIDEAAQQHKDIPGLMQKLGAIGALGPYIP 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ D++ + V SSL M I GSEEQK+K+LP LA
Sbjct: 65 QEYGGAGLDQLSYGLIMQELEAGDSAVRSAASVQSSLVMFPIYTYGSEEQKRKFLPKLAT 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I + LTEP +GSD +A+ T +K G+IL G K WI N+ D+ V++AR+
Sbjct: 125 GELIGSFGLTEPNHGSDPTAMETRLSKDRDGYILNGAKMWITNAPVCDLAVVWARDEE-G 183
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
++ G +V+++ G T + NK LR + G+++ + V +P E+ LP V+S + L
Sbjct: 184 KVRGIIVEREMKGFTTPETHNKWSLRASKTGELIFEDVRIPQENILPDVSSMKGPLSCLN 243
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R ++W IG ++ Y RY ER+QFG P+A++Q+ Q+KL + L I L+ W
Sbjct: 244 SARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKKLAEFLTEITKAQLLSW 303
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL L +G TP S+ K A + R++LG GI+ +F + + +M
Sbjct: 304 RLGVLKNEGKATPQQISMAKRNNVNMALQIARESRQMLGAMGIVGEFPIMRHMM 357
>gi|71065365|ref|YP_264092.1| glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
gi|71038350|gb|AAZ18658.1| putative glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
Length = 394
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 187/353 (52%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT EE+ V R+ +KE+ P + + F +++ ++G + + G TI
Sbjct: 13 DPFLLRDQLTDEERMVTDSARQFFQKELMPGIIQANRNEHFDRNIMRQMGEMGLLGVTID 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ VD+ + + V SSL M I G+EEQK+KYLP LA
Sbjct: 73 GYGCAGMSSVAYGLIAKEVEAVDSGYRSAMSVQSSLVMHPIHAYGTEEQKEKYLPKLATG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP GSD S++ T A V GG+ L G K WI NS +DV V++A++ +
Sbjct: 133 EYVGCFGLTEPDSGSDPSSMLTRARAVAGGYELTGNKMWITNSPISDVFVVWAKDDAGD- 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+++ K GL+ KIE K LR G+I++ KVFVP+ + P + + L
Sbjct: 192 IRGFILDKGMKGLSAPKIEGKFSLRASVTGEIVMDKVFVPEANAFPDIRGLKGPFGCLNK 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + +Y +RKQFG PLAA Q+ Q KL M I + R
Sbjct: 252 ARYGIAWGSMGAAEFCWKASRQYTLDRKQFGRPLAATQLVQLKLANMQTEITLGLQAALR 311
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ P SL K +A E + R++ GGNGI +F + + +M
Sbjct: 312 VGRLMDEDNAAPEMISLIKRNNCGKALEIARIARDMHGGNGISDEFHIIRHVM 364
>gi|268531920|ref|XP_002631088.1| Hypothetical protein CBG02861 [Caenorhabditis briggsae]
Length = 413
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 196/362 (54%), Gaps = 12/362 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA---------EFPFHVIPKLGA 97
D +Q D LT +E+++ + RE ++ + P + E + EF +IP++G+
Sbjct: 19 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRNEKKRTTQSSIEFDPSLIPEMGS 78
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ + G +GYGC G S G + E+ RVD+ + + V +SL + I G+EEQKQ
Sbjct: 79 MGLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGTEEQKQ 138
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVL 215
KY+P LA I C+ LTEP +GS+ + T A + + L G K WI NS ADV+
Sbjct: 139 KYIPDLASGKKIGCFGLTEPNHGSNPGGMETKAIWDETSKTYKLSGSKTWISNSPVADVM 198
Query: 216 VIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++AR++ N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP V
Sbjct: 199 VVWARSSRHGNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNV 258
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
Q L +R+ +AW +G + + + +Y +R+QFG PLA Q+ Q K+ ML
Sbjct: 259 EGLQGPFGCLNNARLGIAWGSLGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADML 318
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I + R+ +L ++G + P S+ K ++ E R++LGGNGI+ ++ +
Sbjct: 319 TEISLGLQGCLRVSRLKDEGKVEPEQISIIKRNSCGKSLEIARKARDMLGGNGIVDEYHI 378
Query: 395 AK 396
+
Sbjct: 379 MR 380
>gi|134098486|ref|YP_001104147.1| glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
gi|291003297|ref|ZP_06561270.1| acyl-CoA dehydrogenase FadE7 [Saccharopolyspora erythraea NRRL
2338]
gi|133911109|emb|CAM01222.1| glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
Length = 397
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 186/364 (51%), Gaps = 8/364 (2%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
A PA F P D DD LT+E+ A+R VR + P + E++E+ EFP +
Sbjct: 6 ARPA--FDP--RDPLGIDDELTTEQLAIRDSVRALCRDHVLPHVGEWFERGEFPQARELA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LG L V G ++GYGC G S +A E+ D+ + + V SLAM I GS
Sbjct: 62 RELGKLGVLGMHLEGYGCAGMSAVDYGLACEELEACDSGLRSLVSVQGSLAMFAIWRWGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQKQ++LP +A I C+ LTEP +GSD +++ T+A + W+L G+K WI N T A
Sbjct: 122 EEQKQQWLPRMAAGEAIGCFGLTEPDHGSDPASMRTSARRDGSDWVLNGRKMWITNGTIA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV V++AR T + + G++V D G + +I+ K+ LR +++L V +P E +LP
Sbjct: 182 DVAVVWAR--TEDGVRGFVVPTDTAGFSAPEIKQKLSLRASVTSELVLDDVRLPAEAQLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
G + L +R + W G + Y R+QFG P+A FQ+ Q KL
Sbjct: 240 GAEGLRGPLSCLNEARYGIVWGATGAGRACLEAALDYAGSREQFGRPIAGFQLTQGKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M +Q L+ L K + G + P S GK A E R +LG NGI ++
Sbjct: 300 MAVRVQNGRLLAMHLGKRKDAGTLLPQQVSFGKLDNVRGALEVARTARTILGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVIR 363
>gi|340793906|ref|YP_004759369.1| glutaryl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
gi|340533816|gb|AEK36296.1| glutaryl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
Length = 394
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 182/350 (52%), Gaps = 5/350 (1%)
Query: 48 YYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-HVIPKLGALRVAGGTIK 106
+ FD LL EE+ +R V + +E+AP + +++E A P + PKLG L V G ++
Sbjct: 8 FIDFDSLLDDEERMLRDAVADFGTRELAPHIGDWFENATLPAKELAPKLGDLGVLGMHLE 67
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A EI +D+ +F+ V SLAM I GSEEQK+ YLP +A
Sbjct: 68 GYGCAGTSAVAYGLACMEIEAIDSGLRSFVSVQGSLAMFAIHHWGSEEQKENYLPKMAAG 127
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP GSD + + T A + WIL G K WI NS ADV V++A+
Sbjct: 128 EYIGCFGLTEPDAGSDPANMRTRAVRDGDEWILNGTKMWITNSPIADVAVVWAKTDDRGD 187
Query: 227 ----INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
G+++ K G T +I K+ LR G+I+L +PD RLPGV+S +
Sbjct: 188 GKPGYAGFILDKGDAGFTAPEIHRKLSLRASVTGEIVLDDCRLPDSRRLPGVSSLRGPLT 247
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R + W +G + + Y R+ F PL++FQ+ Q KL M + +L
Sbjct: 248 CLNEARYGIIWGALGAARNALETAIEYTSTRQVFDRPLSSFQLTQAKLADMTVELDKSVL 307
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ ++ +L + G ++P S+GK T A E R LLG +GI ++
Sbjct: 308 LALQIGRLKDAGKLSPHQVSVGKLNSTRVALEITRECRTLLGASGITLEY 357
>gi|406914544|gb|EKD53712.1| hypothetical protein ACD_60C00160G0034 [uncultured bacterium]
Length = 391
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 188/349 (53%), Gaps = 1/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
F++ LTSEE+ +R R +++ P + + + + F +I ++G G TIKGYGC
Sbjct: 14 FEEELTSEERMIRDAARTYATEKLQPRIQKAFHEETFDREIISEMGQQGFLGATIKGYGC 73
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G + + EI R+D+S + + V SSL M I GSEEQKQKYLP LA +
Sbjct: 74 AGINYVSYGLLAREIERIDSSYRSVLSVQSSLVMYAIDAYGSEEQKQKYLPRLASGELVG 133
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 230
C+ LTEP +GSD +L T A K G +L+G K WI NS ADV +++A+N +I G+
Sbjct: 134 CFGLTEPNHGSDPGSLETRAKKNNKGHMLKGTKMWITNSPIADVFIVWAKN-EAGRIRGF 192
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
+++K+ PGL+ + K+ +R G+I++ V VP E+ LP + + L +R
Sbjct: 193 ILEKNMPGLSAPIMHGKMSMRASITGEIVMDNVLVPAENELPNADGLKGPLGCLDNARYG 252
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
+AW +G + + RY+ +R QFG PLA+ Q+ Q KL M I + R+ +L
Sbjct: 253 IAWGVLGAAEFCWHASRRYVLDRAQFGRPLASNQLIQAKLADMQTQIALALQASLRVGRL 312
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ SL K T A R++LG NGI+ +F V + ++
Sbjct: 313 KDENRAASASISLIKRNSTLIALAIAREARDMLGANGIMEEFNVIRHML 361
>gi|390444985|ref|ZP_10232750.1| glutaryl-CoA dehydrogenase [Nitritalea halalkaliphila LW7]
gi|389663488|gb|EIM75016.1| glutaryl-CoA dehydrogenase [Nitritalea halalkaliphila LW7]
Length = 402
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 186/354 (52%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+Y DDLL E++ VR VR+ ++KEI+P + ++ ++ FP+ ++ K G + G I
Sbjct: 20 DFYGIDDLLNEEQKLVRASVRDFVKKEISPYIEDWAQRGHFPYEIVRKFGEVGAFGPQIP 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + EI R D+ + V SL M I GSEEQKQK+LP LA
Sbjct: 80 SAYGGGGMDYITYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQKQKFLPKLAS 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GS+ S + T + ++L G K WI N+ AD+ V++A+N
Sbjct: 140 GEFLGCFGLTEPDHGSNPSGMTTHFKDMGDHYLLNGAKMWISNAPKADIAVVWAKNEE-G 198
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G + + K LR G+++ + V VP E+ LPG + L
Sbjct: 199 RIHGLIVERGMEGFSTPETHGKWSLRASATGELVFQDVKVPKENLLPGKSGLGAPMMCLD 258
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G +M YD RY ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 259 SARYGIAWGAVGAAMDCYDSARRYALERIQFDKPIASFQLIQKKLAEMLTEITKGQLLAW 318
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L + + G T SL K A R++ GG GI +F + + +M
Sbjct: 319 KLGMMMDAGTATTAQISLAKRNNVEMALNIAREARQIHGGMGITGEFPMMRHMM 372
>gi|93005645|ref|YP_580082.1| glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
gi|92393323|gb|ABE74598.1| Glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
Length = 394
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 187/353 (52%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT EE+ V R+ +KE+ P + + F ++ ++G + + G TI
Sbjct: 13 DPFLLRDQLTDEERMVTDSARQFFQKELMPGIIQANRNEHFDRDIMRQMGEMGLLGVTID 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ VD+ + + V SSL M I G+EEQK+KYLP LA
Sbjct: 73 GYGCAGMSSVAYGLIAKEVEAVDSGYRSAMSVQSSLVMHPIHAYGTEEQKEKYLPKLATG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP GSD S+++T A V GG+ L G K WI NS +DV V++A++ +
Sbjct: 133 EYVGCFGLTEPDSGSDPSSMSTRARAVAGGYELTGNKMWITNSPISDVFVVWAKDDAGD- 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+++ K GL+ KIE K LR G+I++ KVFVP+ + P + + L
Sbjct: 192 ICGFILDKGMKGLSAPKIEGKFSLRASVTGEIVMDKVFVPEANAFPDIRGLKGPFGCLNK 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + +Y +RKQFG PLAA Q+ Q KL M I + R
Sbjct: 252 ARYGIAWGSMGAAEFCWKAARQYTLDRKQFGRPLAATQLVQLKLANMQTEITLGLQAALR 311
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ P SL K +A E + R++ GGNGI +F + + +M
Sbjct: 312 VGRLMDEDNAAPEMISLIKRNNCGKALEIARIARDMHGGNGISDEFHIIRHVM 364
>gi|375093949|ref|ZP_09740214.1| acyl-CoA dehydrogenase [Saccharomonospora marina XMU15]
gi|374654682|gb|EHR49515.1| acyl-CoA dehydrogenase [Saccharomonospora marina XMU15]
Length = 392
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 185/351 (52%), Gaps = 3/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D+ + D+ LT EE +R VRE E+ P +A ++E A P + K G L V G +
Sbjct: 10 DFLRIDEGLTGEESDIRDAVREYARVELQPHVANWYETATLPARDLAKGFGRLGVLGMHL 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S IA E+ VD+ +F+ V SLAM I GSE+Q++++LP LA
Sbjct: 70 QGYGCAGTSSVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRWGSEQQREQWLPKLAA 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ T A + W+L+G K WI N T ADV V++AR T
Sbjct: 130 GEALGCFGLTEPDAGSDPASMRTRARRDGSDWVLDGTKMWITNGTVADVAVVWAR--TEE 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V D PG T ++++K+ LR +++L V +P + P V + L
Sbjct: 188 GIRGFVVPTDTPGFTANEVKHKLSLRASLTAELVLDGVRLPADAAFPEVRGLRGPLSCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + Y+ Y R+QFG PLA +Q+ Q+KL +L + LV
Sbjct: 248 EARFGIVFGVVGAARTCYETALEYTISREQFGRPLAGYQLTQRKLADLLVEVNRAGLVAL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L +L + G + SLGK A E R +LG NGI ++ V +
Sbjct: 308 QLGRLKDAGTLHHSQVSLGKLANVRAALEVARTARSMLGANGISLEYPVMR 358
>gi|359424538|ref|ZP_09215651.1| glutaryl-CoA dehydrogenase [Gordonia amarae NBRC 15530]
gi|358240138|dbj|GAB05233.1| glutaryl-CoA dehydrogenase [Gordonia amarae NBRC 15530]
Length = 395
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 185/350 (52%), Gaps = 2/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D L+ EE+ ++ VR + + P +A+++++ FP + ++G+L + G +
Sbjct: 15 DMLAISTLIGQEEREIQQTVRRFVTDRVLPDIADWFDQGVFPRELAKEMGSLGLLGMHLD 74
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + T +A E+ D+ +F+ V SLAM I GSEEQKQ++LP +A
Sbjct: 75 GYGCAGTNATSYGLACLELEAGDSGFRSFVSVQGSLAMFPIRAFGSEEQKQEWLPRMAAG 134
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP GSD ++ T A + G W+L G K WI N ADV V++AR T
Sbjct: 135 EAIGCFGLTEPDSGSDPGSMRTNARRDGGDWVLNGTKMWITNGGIADVAVVWAR--TDGG 192
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++V D PG + + K+ LR +++L V +P+ LPGV+ + L
Sbjct: 193 VRGFVVPTDTPGFSANNLHKKMSLRASVTSELVLDNVRLPESAVLPGVSGLRGPLSCLNE 252
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + + +G + Y+ Y R+QFG P+A FQ+ Q+KLV+M+ ++ LV
Sbjct: 253 ARFGILFGVVGAARACYEAALDYSITRQQFGKPIAGFQLVQRKLVEMMVSVNRSALVAMH 312
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L + G +TP S GK +A + R LG NGI ++ V +
Sbjct: 313 LGRLKDAGQLTPAQVSFGKLDNVRQAIDVAREARNSLGANGITLEYPVIR 362
>gi|336172440|ref|YP_004579578.1| glutaryl-CoA dehydrogenase [Lacinutrix sp. 5H-3-7-4]
gi|334727012|gb|AEH01150.1| Glutaryl-CoA dehydrogenase [Lacinutrix sp. 5H-3-7-4]
Length = 392
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 184/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + VR RE ++++++PI+ E +KAEFP +I L + G
Sbjct: 8 APDYYNLDELLTDEHKLVRDAAREWVKRDVSPIIEEAAQKAEFPKSIINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEEQRNKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I + LTEP +GS+ + T + ++L G K WI N+ F +V V++A+N
Sbjct: 128 ASGEWIGSFGLTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNAPFCNVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERMQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL + E G T S+ K A R++LGG GI ++ + + M
Sbjct: 307 AWRLGVMRENGTATSAQISMAKRNNVEMAINIAREARQMLGGMGISGEYSIMRHSM 362
>gi|89889429|ref|ZP_01200940.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
gi|89517702|gb|EAS20358.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
Length = 392
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E +R R ++++++PI+ + ++A+FP +IP L ++ G
Sbjct: 8 APDYYNLDDLLTEEHIMIRDAARAWVKRDVSPIIEQAAQEAKFPKSIIPGLASIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQK+K+LP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGTEEQKKKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T IL G K WI NS F DV V++A++
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPGGMVTRFKDAGDHIILNGAKLWISNSPFCDVAVVWAKDEN 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
++I+G LV++ G T + NK LR G+++ + V +P + LPG +
Sbjct: 188 -DRIHGVLVERGMEGFTTPETHNKWSLRASATGELIFQDVKIPKSNILPGRSGLGAPLSC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L E+G T S+ K A R++LGG GI ++ + + M
Sbjct: 307 AWRLGVLREQGKATSAQISMAKRNNVEIAINIAREARQMLGGMGITGEYSIMRHSM 362
>gi|163787256|ref|ZP_02181703.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
gi|159877144|gb|EDP71201.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
Length = 392
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 184/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + VR RE ++++++PI+ E +KAEFP ++ L + G
Sbjct: 8 APDYYNLDELLTEEHKLVRDAAREWVKRDVSPIIEEAAQKAEFPTSIVSGLAEIGAFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+QKYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEEQRQKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I + LTEP +GS+ + T + ++L G K WI NS F + V++A+N
Sbjct: 128 ASGEWIGSFGLTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNSPFCQIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL + E G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 AWRLGVMREAGTATSAQISMAKRNNVDMALTIARDARQMLGGMGISGEYSIMRHMM 362
>gi|448384039|ref|ZP_21563037.1| acyl-CoA dehydrogenase domain-containing protein [Haloterrigena
thermotolerans DSM 11522]
gi|445659028|gb|ELZ11840.1| acyl-CoA dehydrogenase domain-containing protein [Haloterrigena
thermotolerans DSM 11522]
Length = 424
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ Q D+ L EE+ +R RE +E+ + P + +++E FP +IPK+G L ++
Sbjct: 3 DFVQLDEDLDQEERMIRDTAREFVEEHVKPDIGDHFEAGTFPKELIPKMGELGFYAPNLE 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYG P S T + + E+ D+ + V +L M I GSEEQK+++LP + +
Sbjct: 63 GYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPEMGRG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I C+ LTEP +GS+ SA+ T A + G++L G K WI NS ADV +++AR+ +
Sbjct: 123 EAIGCFGLTEPEHGSNPSAMETRAERDGDGYVLNGSKTWITNSPIADVAIVWARDKSAED 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G+LV+ D G+T KI++K+ LR G+I L V VP+E+ LPGV + L
Sbjct: 183 DPVRGFLVETDRDGVTTNKIDDKLSLRASITGEIGLNDVHVPEENVLPGVEGMKGPLSCL 242
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ-AMILV 343
+R +AW +G + ++ +Y K+R QFG P+ FQ+ Q+KL +M I A +L
Sbjct: 243 TQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQITLAQVLA 302
Query: 344 GWRLCK 349
C+
Sbjct: 303 HXSRCR 308
>gi|372223154|ref|ZP_09501575.1| acyl-CoA dehydrogenase domain protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 392
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 182/357 (50%), Gaps = 2/357 (0%)
Query: 44 CASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGG 103
A DYY DD+L+SE VR R + K I PI+ EY + A FP VI L + G
Sbjct: 7 SAPDYYLLDDVLSSEHIMVRDAARSWVNKAIIPIIDEYAQNATFPKQVIGGLAEIGAFGP 66
Query: 104 TI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
I + YG G + + EI R D+ + V SSL M I G+E+QKQ +LP
Sbjct: 67 MIPENYGGAGLDYISYGLLMQEIERGDSGIRSTASVQSSLVMYPIYAYGTEKQKQHFLPK 126
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
LA + + LTEP +GS+ + T ++L G K WI N+ FADV V++A++
Sbjct: 127 LASGEFMGAFGLTEPNHGSNPGGMETKFKDQGDHYLLNGAKMWISNAPFADVAVVWAKDE 186
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I+G LV++ G + NK LR G++ V VP E+ LPG N
Sbjct: 187 N-GRIHGLLVERGMEGFITPETHNKWSLRASATGELHFDNVKVPKENLLPGRNGLSAPLH 245
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R ++W IG +M YD RY KER QFG P+AAFQ+ Q+KL +M+ I L
Sbjct: 246 CLDSARYGISWGAIGAAMDCYDTALRYAKERMQFGKPIAAFQLQQKKLAEMVTEITKAQL 305
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
V RL +L +G + S+ K A A + R++LG GI +F + + +M
Sbjct: 306 VAHRLGQLKNEGKASSAMISMAKRNNVAMALQVARESRQILGAMGISGEFSIMRHMM 362
>gi|345869029|ref|ZP_08820992.1| putative glutaryl-CoA dehydrogenase [Bizionia argentinensis JUB59]
gi|344046513|gb|EGV42174.1| putative glutaryl-CoA dehydrogenase [Bizionia argentinensis JUB59]
Length = 392
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 185/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY D+LLT E + VR RE ++++++PI+ +Y ++AEFP +I L + G
Sbjct: 8 APDYYNLDELLTDEHKLVRDAAREWVKRDVSPIIEDYAQRAEFPKQIIGGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T + ++L G K WI N+ F + V++A+N
Sbjct: 128 ASGEWMGSFGLTEPDHGSNPGGMTTNFKDMGDHYLLNGAKMWISNAPFCQIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V +P E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASSTGELIFDNVKIPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERMQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL + E G T S+ K A R++LGG GI ++ + + M
Sbjct: 307 AWRLGVMRENGTATSAQISMAKRNNVDMAINIAREARQMLGGMGITGEYSIMRHSM 362
>gi|392397200|ref|YP_006433801.1| acyl-CoA dehydrogenase [Flexibacter litoralis DSM 6794]
gi|390528278|gb|AFM04008.1| acyl-CoA dehydrogenase [Flexibacter litoralis DSM 6794]
Length = 415
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 184/353 (52%), Gaps = 2/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D+Y D LLT E++ VR RE ++KE++PI+ E +K FP ++PK G + G +
Sbjct: 31 SPDFYALDSLLTDEQKLVRDSTREFIKKEVSPIIEECADKHIFPNWLLPKFGEMGCFGPS 90
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + E+ R D+ + V SSL M I G+E Q+ KYLP L
Sbjct: 91 IPTEYGGGGMDYISYGLIMQEVERGDSGMRSMASVQSSLVMYPIYQFGNEAQRNKYLPKL 150
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ S + TT + ++L G K WI NS AD+ V++A+N
Sbjct: 151 ATGEWLGCFGLTEPNHGSNPSGMLTTIKDMGDHYLLNGSKMWITNSPEADIAVVWAKNEE 210
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V+K G + I+ K LR G+++ V +P E+ LP +
Sbjct: 211 -GRIKGVIVEKGMEGFSAPVIKEKWSLRASVTGELVFDNVKIPKENMLPNKDGLGAPLMC 269
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G +M YD RY ER QFG P+A FQ+ Q+KL +ML I L+
Sbjct: 270 LDSARYGISWGALGAAMDCYDTARRYATERIQFGKPIAGFQLTQKKLAEMLTEITKAQLL 329
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
WRL L +G T S+ K A R++LGG GI ++ + +
Sbjct: 330 SWRLGTLMNEGKATTAQISMAKRNNVEIAINIARESRQILGGMGITGEYPIMR 382
>gi|150024452|ref|YP_001295278.1| glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
gi|149770993|emb|CAL42460.1| Glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
Length = 392
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 186/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY DDLL+ E + VR R ++KE++PI+ ++ ++AEFP ++ LG + G
Sbjct: 8 SPDYYLLDDLLSEEHKLVRDAARAWVKKEVSPIIEDFAQRAEFPKQIVKGLGEIGGFGPY 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP YGSD ++ T + ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ATGEFIGCFGLTEPNYGSDPGSMITNYKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP + LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QF P+A Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFDKPIAGTQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 TWRLGVLRNEGRATTAQISMAKRNNVDMAINIAREARQILGGMGITGEYSIMRHMM 362
>gi|406658111|ref|ZP_11066251.1| acyl-CoA dehydrogenase [Streptococcus iniae 9117]
gi|405578326|gb|EKB52440.1| acyl-CoA dehydrogenase [Streptococcus iniae 9117]
Length = 401
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 185/355 (52%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + LT E ++RE +E + P++ + W AE P +G + +
Sbjct: 14 EDVMGYSQELTEGEVKKLAQIRELLETKYRPLVNDCWMNAEVPEGFFQDMGKMNYLNDPL 73
Query: 106 KGYGCPG---HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
G PG S A E++R D S +TFI VH L T GSEEQ Y+P
Sbjct: 74 LFEGRPGAKRRSEMYFAFMCYELSRFDISMNTFIGVHIGLGHNTFLFGGSEEQVNYYVPK 133
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEG-GWILEGQKRWIGNSTFADVLVIFARN 221
L + C+ALTEP +GSD + T K +G W++ G+KRWIG ADV+ +FAR+
Sbjct: 134 LQSHELMTCFALTEPEHGSDVAGGLATTAKFDGENWVINGEKRWIGGGAVADVVPVFARD 193
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
TN + ++V+K G T IENKI LRIV N ++ K V VP+ RL +N F+D +
Sbjct: 194 LDTNDVKCFIVEKGQEGFTADVIENKIALRIVPNANLHFKDVKVPESKRLQKINGFKDVA 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
K+L +R VA G G +Y+ +RKQFG ++ +Q+ Q+KL M N + +
Sbjct: 254 KILYSTRAGVAAMAAGGMGGALQATLKYVTQRKQFGKEISQYQLIQEKLAVMQANTMSGL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L ++ E G + S+ K + R RETVALGR + GGNGI D+ +A+
Sbjct: 314 GYATQLARMQESGQYSEIATSMAKMFNATRLRETVALGRGVCGGNGITVDYDIAR 368
>gi|433457206|ref|ZP_20415217.1| putative glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes
BAB-32]
gi|432195225|gb|ELK51778.1| putative glutaryl-CoA dehydrogenase [Arthrobacter crystallopoietes
BAB-32]
Length = 332
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L +SEE A+R VR ++ EI P +A ++E+AEFP ++PK+ L + G I
Sbjct: 3 ADLLSIDSLFSSEELALRDTVRSFVDSEIKPNIAGWYERAEFPLDIVPKMAGLGLLGMHI 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
KGYGCPG S +A E+ D+ TF+ V SLAM IA GSEEQK ++LP +A+
Sbjct: 63 KGYGCPGRSSVEYGLAALELEAGDSGLRTFVSVQGSLAMSAIAKHGSEEQKNEWLPRMAK 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD ++ T A + W++ G KRWIG ++ A V +I+A T +
Sbjct: 123 GEAIGCFGLTEPTAGSDPGSMATFARRDGDDWVINGAKRWIGLASVAQVAIIWA--MTDD 180
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G++V PG T T I K+ +R DI L V +P LP + + L
Sbjct: 181 GVRGFVVPTGTPGFTATPITQKLSMRASIQCDIELADVRLPASAMLPNAKGLRGPFECLN 240
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + Y Y KER QFG PLA +Q+ Q+KLV M I +L+
Sbjct: 241 EARYGIIWGAMGAARDSYLAALDYSKERLQFGKPLAGYQLTQEKLVNMALEINKGMLLAL 300
Query: 346 RLCKL 350
++ +L
Sbjct: 301 QIGRL 305
>gi|386851866|ref|YP_006269879.1| glutaryl-CoA dehydrogenase [Actinoplanes sp. SE50/110]
gi|359839370|gb|AEV87811.1| glutaryl-CoA dehydrogenase [Actinoplanes sp. SE50/110]
Length = 388
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 185/342 (54%), Gaps = 8/342 (2%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGH 113
LL+ EE+ ++ VR + + P +AE++E FP + P+LG L V G ++GYGC G
Sbjct: 15 LLSDEERQIQETVRRFVADRVRPHVAEWFEAGTFPRELAPELGRLGVLGMHLEGYGCAGT 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S +A E+ D+ +F+ V SLAM +I GS EQKQ++LP +A I C+
Sbjct: 75 SAVAYGLACLELEAGDSGLRSFVSVQGSLAMFSIWRYGSPEQKQEWLPRMAAGEAIGCFG 134
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVK 233
LTEP +GSD + + T A + WIL G K WI N + AD+ ++A+ T + I G+LV
Sbjct: 135 LTEPDFGSDPANMRTRAVRDGDDWILTGTKMWITNGSIADIATVWAQ--TEDGIRGFLVP 192
Query: 234 KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAW 293
+ PG T I+ K+ LR G+++L +V +PD RLPG S L +R + +
Sbjct: 193 RGTPGFTSRTIKQKLSLRASITGELILDEVRLPDSARLPGARSLGAPLSCLNEARFGIIF 252
Query: 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK 353
+G + + Y R QF P+AAFQ+ Q+KL M ++ L+ L +L +
Sbjct: 253 GAVGAARDALQVALDYAGSRVQFDRPIAAFQLTQEKLANMAVDVNTGALLALHLGRLKDA 312
Query: 354 GAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
G + P S+GK R+ +A+ RE +LGG+GI ++
Sbjct: 313 GTLKPHQVSVGK---LNNVRKALAVARECRTILGGSGITLEY 351
>gi|255320472|ref|ZP_05361653.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
gi|262378367|ref|ZP_06071524.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
gi|255302444|gb|EET81680.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
gi|262299652|gb|EEY87564.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
Length = 407
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 191/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L EE+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 19 DPFLLEQQLNEEERMVRDTAAAYCQDKLMPRVLEQFRHEKTDPAIFREMGELGLLGPTIP 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 79 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD +++T A KVEGG+ L G K WI NS ADV V++A+ +T+
Sbjct: 139 GEFIGCFGLTEPDHGSDPGSMSTRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSTD 198
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 199 GNVGPIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVQGLRGPF 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 259 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R++LGGNGI +F VA+
Sbjct: 319 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARLARDMLGGNGISDEFGVAR 373
>gi|134294861|ref|YP_001118596.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|387901461|ref|YP_006331800.1| glutaryl-CoA dehydrogenase [Burkholderia sp. KJ006]
gi|134138018|gb|ABO53761.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
G4]
gi|387576353|gb|AFJ85069.1| Glutaryl-CoA dehydrogenase [Burkholderia sp. KJ006]
Length = 395
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 190/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR R + ++AP + E + + ++G L + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAARAYAQDKLAPRVTEAFRHERTDAAIFREMGELGLLGPTI 68
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PDEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGSKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVPDE+ +P V+ +
Sbjct: 189 GADAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPDENLMPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|88802009|ref|ZP_01117537.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
gi|88782667|gb|EAR13844.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
Length = 392
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYYQ DDLL+ E + VR R ++++++PI+ E ++A+FP +I L + G
Sbjct: 8 APDYYQVDDLLSEEHKLVRNTARAWVKRDVSPIIEECAQQAKFPKTIIKGLAKIGAFGPD 67
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ YG G + + EI R D+ + V SSL M I G+E Q++KYLP L
Sbjct: 68 LPLEYGGAGLDQISYGLIMQEIERGDSGIRSTASVQSSLVMYPIFTYGNETQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + + T+ ++L G K WI N+ FA V V++A+N
Sbjct: 128 ASGEWMGCFGLTEPNHGSNPAGMETSFVDKGDHYLLNGAKMWISNAPFAHVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G LV++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLLVERGMEGFSTPETHNKWSLRASATGELIFNNVKVPKENILPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER+QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKEREQFGRPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G + S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AWRLGTLKNEGNASSAQISMAKRNNVEMAVKIARAARQMLGGMGITGEYSIMRHMM 362
>gi|408827642|ref|ZP_11212532.1| acyl-CoA dehydrogenase [Streptomyces somaliensis DSM 40738]
Length = 396
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 191/364 (52%), Gaps = 11/364 (3%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKL 95
SK PP D DDLL E+ AVR VR + + P +AE++E+ E P + +L
Sbjct: 5 SKLPPFDPGDPLGVDDLLGPEDLAVRDTVRAWAAERVLPHVAEWYERGEVPVIRELAREL 64
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
GA+ V G +++GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 65 GAIGVLGMSLEGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIWKHGSEEQ 124
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
K+++LPS+A TI C+ LTEP +GSD +AL T A + W+L G+K WI N + A V
Sbjct: 125 KRRWLPSMASGETIGCFGLTEPDHGSDPAALRTYARRDGSDWVLNGRKMWITNGSVAGVA 184
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A+ T + G+ V D PGL+ +I +K LR ++++ V +P + LPGV
Sbjct: 185 VVWAQ--TDGGMRGFAVPTDTPGLSTPEIRHKWSLRASVTSELVMDDVRLPADAVLPGVT 242
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL M
Sbjct: 243 GLKGPLGCLSHARYGIVWGAMGAARSSFEAALDYARTREQFGRPIGGFQLTQAKLADMAV 302
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVAL---GRELLGGNGILSDF 392
+ IL+ L + G + P S GK RE + + R +LG NGI ++
Sbjct: 303 ELHKGILLAHHLGSRMDAGRLRPEQVSFGK---LNNVREAIGICRTARTILGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVMR 363
>gi|85818186|gb|EAQ39346.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
Length = 392
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R ++++++PI+ + + A+FP +IP L + G
Sbjct: 8 APDYYNLDDLLTEEHKLIRDAARAWVKRDVSPIIEQAAQDAKFPKSIIPGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQ+ K+LP L
Sbjct: 68 IPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGSEEQRNKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ S + T + ++L G K WI NS F DV V++A+N
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPSGMVTNFKDMGDHYLLNGAKLWISNSPFCDVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ + V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AAFQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+RL +L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 AFRLGQLKNEDRATSAQISMAKRNNVEMAIKIAREARQMLGGMGITGEYSIMRHMM 362
>gi|90416754|ref|ZP_01224684.1| putative glutaryl-CoA dehydrogenase protein [gamma proteobacterium
HTCC2207]
gi|90331507|gb|EAS46743.1| putative glutaryl-CoA dehydrogenase protein [marine gamma
proteobacterium HTCC2207]
Length = 394
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + + L+ E++ VR R+ ++ + P + A + ++ P ++G + + G TI
Sbjct: 14 DPFLLEQQLSDEQRMVRDSTRQYAQEHLQPKVRAAFQQETSDP-GTFRQMGEMGLLGLTI 72
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + EI RVD+ + + V SSL M I GSE Q++KYLP LA
Sbjct: 73 EGYGCAGMDYISYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAFGSESQREKYLPKLAS 132
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I + LTEP YGSD + + A +GG++L G K WI NS FADV V++A+ T
Sbjct: 133 GEFIGSFGLTEPDYGSDPGGMVSRARSTDGGYLLNGTKTWISNSPFADVFVVWAK-TDDE 191
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
QI G++++K PGL+ KIE K+ LR+ G I+++ VFV +E LP V + L
Sbjct: 192 QIRGFILEKGMPGLSAPKIEGKLSLRVSTTGQIVMQDVFVAEEQLLPNVKGLKGPFSCLN 251
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + Y ERKQF PLAA Q+ Q KL M +I +
Sbjct: 252 NARYGIAWGSLGAAEACWHAARTYTMERKQFNRPLAATQLIQLKLADMQTDISLGLQGCL 311
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R +L + ++P SL K ++A R++LGGNGI ++ V + +M
Sbjct: 312 RAGQLMDDSNISPELISLIKRNSCSKALNIARKARDMLGGNGISDEYSVMRHMM 365
>gi|307545016|ref|YP_003897495.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
gi|307217040|emb|CBV42310.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
Length = 393
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 184/358 (51%), Gaps = 1/358 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P D ++ D L EE+ V+ R+ + ++ P + E F ++ ++G L +
Sbjct: 6 PVTWDDPFRLIDQLDGEERLVQQTARDYCQDKLLPRVLEANRHERFDREIMTEMGELGLL 65
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G TI GYGC G + + E+ RVD+ + + V SSL M I GSE QK +YLP
Sbjct: 66 GATIDGYGCAGMNYVSYGLIAREVERVDSGYRSAMSVQSSLVMYPIHAFGSEAQKDRYLP 125
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
LA + + LTEP +GSD +++T AT+ E GW L G K WI NS ADV VI+AR+
Sbjct: 126 RLASGEWVGAFGLTEPDHGSDPGSMSTRATRTENGWRLNGTKTWITNSPIADVFVIWARD 185
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ G+++++ GL+ KIE K LR G I ++ V V D RLP V +
Sbjct: 186 -DEGLVRGFILERGMDGLSAPKIEGKFSLRASVTGQIAMQDVEVDDAQRLPDVTGLKGPF 244
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 245 SCLNRARYGIAWGSMGAAEACWHAARDYTLERKQFGRPLAANQLIQKKLADMQTEIALGL 304
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R ++ ++G + P SL K +A + R++ GGNGI ++ V + +M
Sbjct: 305 QAALRAGRMIDEGQLVPEVISLIKRNNCGKALDIARQARDMHGGNGISDEYHVIRHVM 362
>gi|421463879|ref|ZP_15912572.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
radioresistens WC-A-157]
gi|400206253|gb|EJO37230.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
radioresistens WC-A-157]
Length = 407
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L EE+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 19 DPFLLEQQLNEEERMVRDTAAAYCQDKLMPRVLEQFRHEKTDPAIFREMGELGLLGPTIP 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 79 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT- 224
I C+ LTEP +GSD +++T A KVEGG+ L G K WI NS ADV V++A+ +T
Sbjct: 139 GEFIGCFGLTEPDHGSDPGSMSTRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSTE 198
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 199 GNVGPIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVQGLRGPF 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 259 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R++LGGNGI +F VA+
Sbjct: 319 QVALRFGRMKDEGVASVEGTSLIKRNNCGKALDIARLARDMLGGNGISDEFGVAR 373
>gi|291333465|gb|ADD93166.1| putative acyl CoA dehydrogenase C terminal domain protein
[uncultured archaeon MedDCM-OCT-S05-C724]
Length = 388
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 185/350 (52%), Gaps = 2/350 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y D LT EE VR VR+ +++E+ PI+ +Y+ + FP +IPK+G + + G +
Sbjct: 8 DFYNLDQHLTEEELMVRDLVRDWVDEEVLPIIEDYYTRGTFPLELIPKIGEMGLFGCNLS 67
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GY C G S + E+ R D++ + + V SL M I G+EEQK KYLP +A+
Sbjct: 68 GYECAGLSNVAYGVICQELERGDSAIRSCVSVQGSLTMYPIHAFGTEEQKNKYLPGMAKG 127
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + T A ++L G K WI N T AD+ +++A+ +
Sbjct: 128 ELIGCFGLTEPDHGSDPGGMETKAIDDGDSYVLNGAKMWITNGTIADLAIVWAK--LDGK 185
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++V+K G + +++ K LR +++ + +P + LP V + L
Sbjct: 186 IRGFIVEKGDKGFSAPEMKGKHSLRASITSELVFQDCRIPKDRILPEVQGLKGPLSCLNQ 245
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G +MG + Y K R F P+A+FQ+ Q KL ML I L+ +
Sbjct: 246 ARFGIAWGSLGAAMGCFHSSVDYAKSRIMFKKPIASFQLVQNKLAWMLREITKGQLLAYH 305
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + +KG TP SLGK A + R++ G NGIL+++ + +
Sbjct: 306 LGRAKDKGEATPEMISLGKMNNVDIALQISRTSRDIHGANGILNEYPIMR 355
>gi|334336570|ref|YP_004541722.1| glutaryl-CoA dehydrogenase [Isoptericola variabilis 225]
gi|334106938|gb|AEG43828.1| Glutaryl-CoA dehydrogenase [Isoptericola variabilis 225]
Length = 401
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 186/349 (53%), Gaps = 6/349 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L+ +E+A R +VR ++ + P +A ++ A FP ++P LG + G +
Sbjct: 12 TDLLALDAQLSDDERATRDRVRALVDAHVRPHVARWFADAVFPRELVPVLGEAGLLGMHL 71
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S +A+AE+ D+ TF+ V SLAM IA GSEEQKQ +LP +A
Sbjct: 72 EGYGCAGRSAVEYGLAMAEVEAADSGIRTFVSVQGSLAMSAIAKHGSEEQKQHWLPRMAT 131
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ALTEP GSD + + T A + W+++G KRWIG ++ ADV V++A+ T +
Sbjct: 132 GEAIGCFALTEPTAGSDPAGMRTRAVRDGDTWVIDGAKRWIGLASVADVAVVWAKVTEDD 191
Query: 226 ------QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
++ G+LV PG T IE K+ LR D+ L V VP + LP +
Sbjct: 192 AGDGRERVRGFLVPTSTPGFRATPIEPKLSLRASVQCDVALDGVRVPADAILPHNPGLRG 251
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW G + ++ Y ++R+QFG PLAAFQ+ Q KLV+M +
Sbjct: 252 PFACLDEARYGIAWGAAGAARDCLEVALAYAQQREQFGRPLAAFQLTQAKLVEMALEVSR 311
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L+ L +L + G + P S GK A + R +LGGNG+
Sbjct: 312 AQLLALHLGRLKDAGRLEPHQVSAGKLSNVRAALDVARTARTILGGNGV 360
>gi|118464253|ref|YP_883894.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
gi|118165540|gb|ABK66437.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length = 398
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 186/362 (51%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D LL+ +E+AVR VR + + P +AE++E + P + +
Sbjct: 6 STKTPPAFDRYDPLGLDALLSDDERAVRDTVRGFCAEHVLPHVAEWFEIGDLPVRELARE 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 66 FGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIWNFGSEE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP +A + C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV
Sbjct: 126 QKRQWLPGMATGEMLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLDGRKLWITNGSVADV 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + I G+LV D PG T I +K+ LR +++L V +P E LPG
Sbjct: 186 AVVWA--GTDDGIRGFLVPTDTPGFTANTIHHKLSLRASITSELVLDDVRLPGEAMLPGA 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 244 TGLRGPLSCLSEARYGIIWGAMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 304 VELHKGQLLSLHLGRLKDSTGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 363
Query: 395 AK 396
+
Sbjct: 364 IR 365
>gi|386819328|ref|ZP_10106544.1| acyl-CoA dehydrogenase [Joostella marina DSM 19592]
gi|386424434|gb|EIJ38264.1| acyl-CoA dehydrogenase [Joostella marina DSM 19592]
Length = 392
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLL+ E + VR R ++KE++PI+ ++ +KAEFP +I L + G
Sbjct: 8 APDYYNLDDLLSEEHKLVRDAARSWVKKEVSPIIEDFAQKAEFPKQIINGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+E Q++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGTEAQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + T ++L G K WI N+ FAD+ V++A+N
Sbjct: 128 ASGEFIGCFGLTEPNHGSNPGGMETKFKDAGDYYLLNGAKLWISNAPFADLAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFDNVKVPKENLLPEKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AA Q+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMVTEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L +G + S+ K A A R++LG GI ++ + + +M
Sbjct: 307 ALRLGQLKNEGKASTAQISMAKRNNVAMALNIAREARQVLGAMGITGEYSIMRHMM 362
>gi|344173956|emb|CCA89145.1| dehydrogenase [Ralstonia syzygii R24]
Length = 397
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 198/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDAQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGMLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPDHGSDPASMVTRAKKVDGGYSLSGAKMWITNSPIADVFVVWAKLPDD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+QI G+++++ GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 NGEDQIRGFILERGWKGLSAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVHGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K +A + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|409404900|ref|ZP_11253373.1| acyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
gi|386435667|gb|EIJ48491.1| acyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
Length = 397
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + L+ +E+ VR + + +AP + E + + + ++G L + G TI
Sbjct: 13 ADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREMGELGLLGATI 72
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M I G+E QKQKYLP LA
Sbjct: 73 DEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEAQKQKYLPKLA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++
Sbjct: 133 SGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADVFVVWAKDDE- 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G+++ K A GL+ I K+GLR G+I++ VF P+E+ P V + L
Sbjct: 192 GEIRGFILDKGAKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVRGLKGPFTCL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ RY ER+QFG PLAA Q+ Q+KL ML I +
Sbjct: 252 NSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLTEISLGLQGC 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L ++G S+ K +A + + R+++GGNGI +F VA+
Sbjct: 312 LRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVAR 363
>gi|426197691|gb|EKV47618.1| glutaryl-CoA dehydrogenase [Agaricus bisporus var. bisporus H97]
Length = 420
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 182/350 (52%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT+EE A+R E ++++ P + W EF +IP++G + + G TIK
Sbjct: 37 DPLNLESQLTAEEIAIRDTAHEYCQEKLMPRVLHQWRTEEFDHTLIPEMGQVGLLGPTIK 96
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E RVD+ + V SSL M I GSE QK+KYLP LA+
Sbjct: 97 GYGCAGVSDVAYGLIAREFERVDSGYRSTSSVQSSLVMHPIHEFGSEAQKEKYLPRLAKG 156
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I + LTEP +GSD + TTA +V+GG+I+ G K WI NS ADV VI+A+ N+
Sbjct: 157 EIIGAFGLTEPDHGSDPGGMETTAEEVDGGFIVNGSKTWISNSPVADVFVIWAKCKWDNR 216
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+L++K A GLT I+NKI LR+ G + + V V + LPG L
Sbjct: 217 IRGFLLEKGAKGLTAPPIKNKIALRVSLTGSVFMDNVRVGQDSLLPGSKGLGSAFACLNS 276
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G D Y +RKQFG P+A+FQ+ Q+KL I + +
Sbjct: 277 ARYGISWGVMGALEDCLDRTRDYALQRKQFGRPIASFQLIQKKLADAQTEIALGLQASLQ 336
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ KL +G + P +L K +A + ++ GGN ++ V +
Sbjct: 337 VGKLKGEGKLAPEMINLIKRNNCGKALQQSRALLDVFGGNACADEYHVGR 386
>gi|300780647|ref|ZP_07090502.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
gi|300533633|gb|EFK54693.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
Length = 402
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 196/351 (55%), Gaps = 1/351 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DYYQ + E+ K RE ME P + E WEKAE+ + + + I
Sbjct: 19 TDYYQVFADVDGEDLEWWQKAREFMEW-ARPSLNESWEKAEYNIPAVEEAARRGLVTDGI 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ G PG S+ + E+AR DAS +T +V S LAM +I+ CGSE+QK KYL +++
Sbjct: 78 EIDGQPGISIRANRLIQMELARTDASTATAHIVQSGLAMRSISECGSEDQKAKYLGPMSR 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ +ALTEP +GSD+ L T+A + W++ G+K+WIG+ + + V++AR+
Sbjct: 138 MEIRGGFALTEPDHGSDSIGLETSARREGDEWVINGEKKWIGHGSVGHITVVWARDEEDG 197
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
++ G++V +D G + I K LR + I L V V D+ RLP ++F+DT++VL
Sbjct: 198 EVKGFIVDQDQEGYSAETITGKASLRGIPQAHIKLNDVRVSDDRRLPNSHTFRDTARVLT 257
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R+ VAW +G+++ Y+ Y + R QFG PL QI QQ+L ML ++ +M L
Sbjct: 258 GTRIAVAWVALGMAIDCYEKALDYAQLRVQFGRPLVKNQIIQQRLADMLQDVTSMALYCR 317
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L E G + A+L K T AR+ A R++ GG GIL + VA+
Sbjct: 318 RLLELEEAGELNEKQAALAKVHNTRGARKISADARDMFGGVGILLENDVAR 368
>gi|144898057|emb|CAM74921.1| glutaryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
Length = 392
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 195/353 (55%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + +D L+ EE+ +R R+ + ++ P + + + F ++ ++GAL + G T+
Sbjct: 7 DDPFLIEDQLSQEERMIRDAARDYCQDKLQPRVISAFREERFDREIMTEMGALGLLGPTV 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M I GSE QKQK+LP LA
Sbjct: 67 PEEYGGPGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEAQKQKWLPRLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD +++ T A KV+GG++L GQK WI NS AD+ V++A++
Sbjct: 127 SGELVGCFGLTEPDSGSDPASMRTRAKKVDGGYLLSGQKMWITNSPIADIAVVWAKSDGH 186
Query: 225 N-QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ +I G++V++ G T KIE K+ LR G+I+L + FVP+++ LP +
Sbjct: 187 DGKIKGFVVERGTKGFTTPKIEGKLSLRASVTGEIVLDEAFVPEDNLLPNASGLAGPFGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q KL M +I +
Sbjct: 247 LNKARYGIAWGVVGAAEFCWHAARQYTLDRKQFGRPLAANQLIQFKLANMQTDIALALQA 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ + G+ P SL K +A + + R++ GGNGI +F V +
Sbjct: 307 AIRVGRMMDDGSWAPEAVSLIKRNNCVKALDIARVARDMHGGNGIADEFQVMR 359
>gi|410692284|ref|YP_003622905.1| glutaryl-CoA dehydrogenase(GCDH) [Thiomonas sp. 3As]
gi|294338708|emb|CAZ87040.1| glutaryl-CoA dehydrogenase(GCDH) [Thiomonas sp. 3As]
Length = 393
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 194/353 (54%), Gaps = 4/353 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D Q D L+++E+AVR + + ++AP +++ + + P + ++GAL + G T
Sbjct: 11 DDALQLDAQLSADERAVRDAAQAYCQDQLAPRVLSAFRHETTDP-TIFREMGALGLLGPT 69
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + G + E+ RVD+ + + V SSL ML I GSE KQKYLP L
Sbjct: 70 IPEAYGGAGLNYVGYGLIAREVERVDSGYRSMMSVQSSLVMLPIFAFGSEAMKQKYLPKL 129
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A+ I C+ LTEP +GSD ++T A V GG+ L G K WI NS ADV V++A++
Sbjct: 130 ARGEWIGCFGLTEPDHGSDPGGMSTRARAVPGGYALTGNKMWISNSPIADVFVVWAKD-D 188
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G+++ K A GL+ + K+GLR G+I++ +VF P+E+ V +
Sbjct: 189 AGEIRGFVLDKGAKGLSAPALHGKVGLRTSITGEIVMDQVFCPEENAFAQVRGLKGPFTC 248
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + Y +Y+ +RKQFG PLAA Q+ Q+KL M +I +
Sbjct: 249 LNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLIQKKLADMATDISLGLQG 308
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ + G P SL K +A + R++LGGNGI +F VA+
Sbjct: 309 VLRLGRMKDDGTAAPEVTSLLKRNNCGKALDIARTARDMLGGNGISDEFGVAR 361
>gi|300692218|ref|YP_003753213.1| dehydrogenase [Ralstonia solanacearum PSI07]
gi|299079278|emb|CBJ51950.1| dehydrogenase [Ralstonia solanacearum PSI07]
Length = 397
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 199/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR ++ ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDAQLTDDERMVRDAAAAYVQDKLMPRVLESFRHEKTDVAIFREMGALGMLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV +++A+ +
Sbjct: 130 TGEWIGCFGLTEPDHGSDPASMVTRAKKVDGGYSLSGAKMWITNSPIADVFLVWAKLPDD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+QI G+++++ GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 NGEDQIRGFILERGWKGLSAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVHGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K +A + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|317121571|ref|YP_004101574.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
marianensis DSM 12885]
gi|315591551|gb|ADU50847.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
marianensis DSM 12885]
Length = 386
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 185/349 (53%), Gaps = 2/349 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY+ DL T EE+ ++ + R +E E AP +A++WE+ FP H+IP+ G L G
Sbjct: 3 ALDYYRVADLFTPEERLIQEEARRFLEAEAAPHIAQWWEEGTFPRHLIPRFGELGFLGSN 62
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YG G S + + E+ R+D+ +F V SSL M I GSEE++++YLP L
Sbjct: 63 LPEEYGGAGASNVAYGLIMYELERIDSGLRSFASVQSSLVMYPIYRYGSEERRREYLPKL 122
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A+ + C+ LTEP GSD ++ T A K +++ G+K WI N AD+ VI+A++
Sbjct: 123 ARGEIVGCFGLTEPDGGSDPGSMKTRARKDGSSYVITGRKMWITNGNIADIAVIWAKD-D 181
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V D PG +I++K LR +++L +V V LP
Sbjct: 182 EGVIRGFIVPTDTPGFRAREIKHKASLRASVTSELILDEVRVDAAQMLPEARGLGAALSC 241
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W G+ V+ + + R FG P+A Q+ Q KLV+M+ + +L+
Sbjct: 242 LTQARYGITWGAAGVIDAVFHEALEFARHRITFGRPIAERQLVQAKLVEMVESHTQALLM 301
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL KL ++ +T SL K A + RE+LGG+GI ++
Sbjct: 302 SWRLGKLKDEDKLTYAQVSLAKRSNVRAALQAARSAREILGGSGITLEY 350
>gi|222111580|ref|YP_002553844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221731024|gb|ACM33844.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
Length = 398
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 189/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+AVR R + ++AP + + + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLTEDERAVRDAARAYCQDKLAPRVLDMFRHEKTDVTIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I GSE QKQKYLP LA
Sbjct: 69 PTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGSEAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-- 222
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVEA 188
Query: 223 --TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T QI G+++ K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 189 SGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLVQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K +A + L R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|332291488|ref|YP_004430097.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter sp.
4H-3-7-5]
gi|332169574|gb|AEE18829.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter sp.
4H-3-7-5]
Length = 392
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R ++++++PI+ + + A+FP +IP L + G
Sbjct: 8 APDYYNIDDLLTEEHKLIRDAARAWVKRDVSPIIEQAAQDAKFPKSIIPGLAEIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQ+ K+LP L
Sbjct: 68 IPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYKYGSEEQRNKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ S + T + ++L G K WI NS F DV V++A+N
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPSGMVTNFKDMGDHYLLNGAKLWISNSPFCDVAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ + V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+AAFQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 ALRLGQLKNEDRATSAQISMAKRNNVEMALKIAREARQILGGMGITGEYSIMRHMM 362
>gi|398788839|ref|ZP_10550932.1| acyl-CoA dehydrogenase [Streptomyces auratus AGR0001]
gi|396991882|gb|EJJ03005.1| acyl-CoA dehydrogenase [Streptomyces auratus AGR0001]
Length = 392
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 185/357 (51%), Gaps = 4/357 (1%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALR 99
P A D DDLLT E++AVR VR + I P +A+++E+ E P + +LG++
Sbjct: 5 PFDARDPLGIDDLLTDEDRAVRATVRRWTAERILPSIADWYERGELPGLRELARELGSIG 64
Query: 100 VAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ++
Sbjct: 65 ALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIWRFGSEEQKQEW 124
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219
LP +A I C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV V++A
Sbjct: 125 LPRMAAGELIGCFGLTEPDIGSDPAAMRTHAKRDGTDWVLSGRKMWITNGSVADVAVVWA 184
Query: 220 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
R T + I G++V PG +I++K LR +++L +V +P + LPG +
Sbjct: 185 R--TDDGIRGFVVPTGTPGFAAPEIKHKWSLRASVTSELVLDEVRLPSDAVLPGATGLRG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M +
Sbjct: 243 PLGCLSHARYGIVWGSMGAARASFEAALDYAKTREQFGKPIGGFQLTQAKLADMAVELHK 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
IL+ L + G + P S GK A E R +LG NGI ++ V +
Sbjct: 303 GILLAHHLGLRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVMR 359
>gi|403729884|ref|ZP_10948715.1| glutaryl-CoA dehydrogenase [Gordonia rhizosphera NBRC 16068]
gi|403202804|dbj|GAB93046.1| glutaryl-CoA dehydrogenase [Gordonia rhizosphera NBRC 16068]
Length = 402
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 12/370 (3%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVI 92
+T KF A D D + +E AVR VR + + + P + E++E P ++
Sbjct: 4 STSTPKF--SALDPLNLDLDYSDDELAVRDSVRGFLAEHVTPSIGEWFESGGIPIARDLM 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+ G L V G + GYGC G S +A E+ D+ + + V SLAM +I GS
Sbjct: 62 KQFGQLGVLGMHLDGYGCGGASSVHYGLASLELEACDSGIRSMVSVQGSLAMYSIYNNGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQKQ++LPS+A+ TI C+ LTEP GSD +++ T A + WIL+G+K WI NS A
Sbjct: 122 EEQKQRWLPSMAEGTTIGCFGLTEPDAGSDPASMKTRARRDGDDWILDGRKMWITNSPIA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV V++A+ T N + G++V D PG++ +I++K+ LR G+I+L V +P + +P
Sbjct: 182 DVAVVWAK--TDNGVRGFIVPTDTPGVSTPEIKHKLSLRASTTGEIVLDSVRLPADALMP 239
Query: 273 GVNSFQDTSKV------LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQIN 326
G + + + L +R + W +G + ++ Y K+R QFG P+ FQ+
Sbjct: 240 GNDDLHKGNGIKAPLSSLTEARYGIIWGSMGAARSAWEAAVDYAKQRTQFGKPIGGFQLT 299
Query: 327 QQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGN 386
Q K+ M +Q L+ L +L + + P S GK T A + R +LGGN
Sbjct: 300 QAKIADMAIELQKGQLLAQHLGRLKDSVGLRPDQVSFGKLNNTREAIKICRTARTILGGN 359
Query: 387 GILSDFLVAK 396
GI +F V +
Sbjct: 360 GISLEFPVIR 369
>gi|403730384|ref|ZP_10948962.1| glutaryl-CoA dehydrogenase [Gordonia rhizosphera NBRC 16068]
gi|403202572|dbj|GAB93293.1| glutaryl-CoA dehydrogenase [Gordonia rhizosphera NBRC 16068]
Length = 395
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 193/362 (53%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LLT EE A+R VRE + + P +A+++E A+ P + K LG+L
Sbjct: 4 PETLTQLFALDSLLTPEEIAIRNTVREFGNERLRPYVADWFENAQLPVREVAKELGSLGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQKQ++L
Sbjct: 64 LGMHLEGYGCPGTSATAYGLACLELEAVDSGLRSLVSVQGSLAMFSIHHWGSEEQKQEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A + + C+ LTEP +GS+ + + T A + W+L+G K WI N + ADV V++A+
Sbjct: 124 PRMAAGDALGCFGLTEPDFGSNPAGMRTNAKRDGDDWVLDGTKMWITNGSVADVAVVWAQ 183
Query: 221 ---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ + I G++V D PG + +I+ K+ LR +++L V +P LP
Sbjct: 184 TDLDDSPRGIRGFVVPTDTPGFSAPEIKKKMSLRASITSELVLDGVRLPSSAMLPKAAGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + + IG + + Y + R+ F PLAA+Q+ Q K+ M +
Sbjct: 244 RGPLTALGEARFGIVFGAIGAARDCLEAAIDYAESREVFDKPLAAYQLTQAKIADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G + P S GK RE +A+ RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGEIRPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|289706824|ref|ZP_06503167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
gi|289556509|gb|EFD49857.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
Length = 400
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 189/358 (52%), Gaps = 8/358 (2%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
P DY T E++A + R +E+ + +W++AE+P ++ + G L +
Sbjct: 14 PLDVDYLDAFGEATDEDRAHWDRAR-AYGQEVLERIDGHWDRAEYPLDLVARAGELDL-- 70
Query: 103 GTIKGYGCPGHSVT---GAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKY 159
G PGH+V A + EI+R D S + V L + + C EQK++Y
Sbjct: 71 -LTDGLEVPGHAVMSPLAAGLVAMEISRADGSMAAAAAVQGGLVLRALVHCAGPEQKERY 129
Query: 160 LPSLAQLNTIACWALTEPAYGSDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIF 218
L +A+ +ALTEP +GSD+ +L T+A GGW+L G K+WIGN + +++
Sbjct: 130 LEPVARGTLPGGFALTEPLHGSDSVSLETSARPDAAGGWVLNGAKKWIGNGAAGGITIVW 189
Query: 219 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
AR+T Q+ G++V++ PG I K LR + +I L V V D+ RLP V +F+
Sbjct: 190 ARDTEDGQVKGFVVEQSTPGYEAEVITGKGALRAIHQAEITLTDVRVGDDARLPNVATFK 249
Query: 279 DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQ 338
D ++VL +RV V W +G + +++ Y ++R+QFG PLAA Q+ Q++L QML +
Sbjct: 250 DAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLAAHQMVQERLAQMLDEVT 309
Query: 339 AMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
AM + +L G + ASL K T AR + R++LGGNGIL + V +
Sbjct: 310 AMQTRCVAVARLQAAGRLRDEQASLLKYACTRGARRVAQIARDMLGGNGILLEHRVMR 367
>gi|148653334|ref|YP_001280427.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
PRwf-1]
gi|148572418|gb|ABQ94477.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
Length = 398
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 187/354 (52%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + D LT EEQ V+ + + E+ P + + F +++ ++G L + G TI
Sbjct: 16 SDPFLLHDQLTEEEQMVQRSAHDFCQSELMPGILQANRHENFDRNIMRQMGELGLLGVTI 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S + E+ VD+ + + V SSL M I G+E QK+KYLP LA
Sbjct: 76 DGYGCAGLSSVAYGVIAKEVEAVDSGYRSAMSVQSSLVMHPIWAYGTEAQKEKYLPKLAT 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ T A KV+GG+ L+G K WI NS ADV V++A++
Sbjct: 136 GEYVGCFGLTEPDAGSDPGSMKTRAKKVDGGYQLKGSKMWITNSPIADVFVVWAKD-DEG 194
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KIE K LR G+I++ VFVP+E+ P + + L
Sbjct: 195 EIRGFVLEKGMKGLSAPKIEGKFSLRASITGEIVMDDVFVPEENAFPDIRGLKGPFGCLN 254
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +RKQF PLAA Q+ Q KL M I +
Sbjct: 255 KARYGIAWGSMGAAEFCWKAARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAAL 314
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++ P SL K +A + R++ GGNGI +F V + +M
Sbjct: 315 RVGRLMDEHNAAPEMISLIKRNNCGKALNIARVARDMHGGNGISDEFHVIRHVM 368
>gi|384262633|ref|YP_005417820.1| hypothetical protein RSPPHO_02224 [Rhodospirillum photometricum DSM
122]
gi|378403734|emb|CCG08850.1| unnamed protein product [Rhodospirillum photometricum DSM 122]
Length = 412
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 190/363 (52%), Gaps = 2/363 (0%)
Query: 38 ASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGA 97
A K P D +D L EE+ +R + ++A + E F ++ ++GA
Sbjct: 20 ADKHPFVWEDPLLLEDSLGEEERMIRDTAHAYCQDKLAARVVEANRNEHFDPEILREMGA 79
Query: 98 LRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L G T+ + YG G + + EI R+D+ + + V SSL M I GSE Q+
Sbjct: 80 LGFLGPTLPEAYGGAGVNYVAYGLIAREIERIDSGYRSAMSVQSSLVMYPIYTYGSEAQR 139
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
QKYLP LA+ I C+ LTEP GSD +L T A V+GGW++ G K WI N+ ADV V
Sbjct: 140 QKYLPPLARGEWIGCFGLTEPDSGSDPGSLRTRARAVDGGWLVSGTKMWITNAPLADVFV 199
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
++A+ T I G++++K GL+ +IE K LR G+I+++ VFVP ++ LPGV+
Sbjct: 200 VWAK-TEDGVIRGFILEKGMKGLSAPRIEGKFSLRASTTGEIVMEDVFVPADNLLPGVSG 258
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L +R +AW +G + + +Y ERKQFG PLAA Q+ Q KL M
Sbjct: 259 LKGPFGCLNRARFGIAWGALGAAESCWHTARQYTLERKQFGRPLAANQLIQWKLANMQTE 318
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I + R+ +L ++G P SL K +A E R++LGGNGI F V +
Sbjct: 319 IALGLQGCLRVGRLMDEGREAPEMISLIKRNSCGKALEIARTARDMLGGNGIADAFPVIR 378
Query: 397 VIM 399
+M
Sbjct: 379 HVM 381
>gi|383827234|ref|ZP_09982336.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium xenopi RIVM700367]
gi|383331023|gb|EID09542.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium xenopi RIVM700367]
Length = 389
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 186/359 (51%), Gaps = 5/359 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGA 97
+ F P SD D L+S+E AVR VRE + +AP +AE++E + P + K G
Sbjct: 2 TSFHP--SDPLSLDASLSSDELAVRDTVREFCAEHVAPNVAEWFEIGDLPVRALAKGFGE 59
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G +KGYGC G S +A E+ D+ + + V SLAM I GSEEQKQ
Sbjct: 60 LGLLGMHLKGYGCGGASAVHYGLACLELEAADSGIRSLVSVQGSLAMFAIWNYGSEEQKQ 119
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV ++
Sbjct: 120 QWLPGMAAGELLGCFGLTEPDVGSDPAAMKTRAQQDGSDWVLNGRKMWITNGSVADVAIV 179
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A TT + I G++V + PG T I +K+ LR +++L V VP + LP
Sbjct: 180 WA--TTDDGIRGFIVPTNTPGFTANTIHHKLSLRASITSELVLDDVRVPQDALLPKAIGL 237
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M +
Sbjct: 238 RGPLACLSEARYGIIWGAMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMAVEL 297
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L + + P S GK T A E R +LGGNGI ++ V +
Sbjct: 298 HKGQLLALHLGRLKDSVGLRPEQISFGKLNNTREAIEICRTARTILGGNGISLEYPVIR 356
>gi|121595295|ref|YP_987191.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
JS42]
gi|120607375|gb|ABM43115.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
Length = 398
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 189/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+AVR R + ++AP + + + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLTEDERAVRDAARAYCQDKLAPRVLDMFRHEKTDVTIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I GSE QKQKYLP LA
Sbjct: 69 PTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGSEAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-- 222
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMATHAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVEA 188
Query: 223 --TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T QI G+++ K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 189 SGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLVQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K +A + L R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|410696560|gb|AFV75628.1| acyl-CoA dehydrogenase [Thermus oshimai JL-2]
Length = 385
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D Y+ +DLLT EE+A+R R +E E P + ++WE FP H+IP+ L G T+
Sbjct: 3 DLYRVEDLLTPEERAIRQAARRFLEAEALPHIRDWWEAGTFPTHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ RVD+ +F+ V +SL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVSSAAYGLIAYELERVDSGLRSFVSVQNSLVMYPIFAFGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L G K WI N A + +++A++
Sbjct: 123 GEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGHLAQIAILWAKDEE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG +++ K+ LR +++L+ V VP+ RLP + L
Sbjct: 182 GVVRGFIVPTDTPGFKAVEVKRKMSLRASATSELILEDVRVPEHLRLPKAEGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ ++KER FG PLA Q+ Q+KL +ML +L+
Sbjct: 242 TQARFGIAWGVLGALEAVYEEARAFVKERFSFGEPLARKQLVQEKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G ++P SL K T +A + L RELLGG+GI ++
Sbjct: 302 WRLARLKDEGKLSPVQVSLAKRQNTWKALQGARLARELLGGSGITLEY 349
>gi|254253130|ref|ZP_04946448.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124895739|gb|EAY69619.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 395
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR R + ++AP + + + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEDERMVRDAARAYAQDKLAPRVTDAFRHERTDIEIFREMGEVGLLGPTI 68
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PDEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ +
Sbjct: 129 SGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLNDD 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L VFVP+E+ +P VN +
Sbjct: 189 GNDTIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDDVFVPEENLMPNVNGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEVTSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|91781939|ref|YP_557145.1| glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
gi|91685893|gb|ABE29093.1| Putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
Length = 396
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDAI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILEKGWRGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|302518913|ref|ZP_07271255.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
gi|302427808|gb|EFK99623.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
Length = 395
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGT 104
D DDLL+ EE+AVR VR+ + + P +AE++E E P + +LG+L + G
Sbjct: 13 DLAGIDDLLSPEEKAVRQAVRQVCDASVEPCIAEWYESGELPAVRELAKELGSLGLLGMH 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S +A E+ D+ + + V SLAM I GSEEQK+++LP +A
Sbjct: 73 LEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMYAIHRFGSEEQKREWLPRMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + T A + W+L+G+K WI N + A V V++AR
Sbjct: 133 TGEAIGCFGLTEPDHGSDPGGMRTRARRAGDDWVLDGRKMWITNGSVASVAVVWAR--AE 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG + I++K LR ++LL V +P + LP V + L
Sbjct: 191 EGVRGFVVPTDTPGFSAPPIKHKGSLRASVTSELLLDGVRLPADAVLPEVTGLRGPLSCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y KER+QFG PLA FQ+ Q KL M + L+
Sbjct: 251 NEARYGILWGALGAARSCFRTALSYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P SLGK +A R +LG NGI +F V +
Sbjct: 311 LHLGRRKDTVGLRPEQVSLGKLNNVNKALAIARTSRTILGANGISLEFPVMR 362
>gi|385206728|ref|ZP_10033596.1| acyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385179066|gb|EIF28342.1| acyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 396
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDAI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|262376460|ref|ZP_06069689.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
gi|262308599|gb|EEY89733.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
Length = 399
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 190/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LTSEE+ +R + ++ P + E + + + ++G L + G TI
Sbjct: 11 DPFLIEQQLTSEERMIRDAAAAYCQDKLMPRVLEQFRHEKTDPAIFREMGELGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 71 EQYGGAGLNYVSYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT- 224
I C+ LTEP YGSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 131 GEYIGCFGLTEPDYGSDPGSMITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 190
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 191 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLKGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R+++GGNGI +F VA+
Sbjct: 311 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|344998788|ref|YP_004801642.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
SirexAA-E]
gi|344314414|gb|AEN09102.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. SirexAA-E]
Length = 402
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 186/364 (51%), Gaps = 6/364 (1%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKL 95
+K PP +D DDLL E+ A+R VR + P +AE++EK E P + +L
Sbjct: 6 TKLPPFDPADPLGIDDLLDPEDLAIRDTVRTWAADRVLPHIAEWYEKGELPGIRDLAREL 65
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
GAL G +++GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 66 GALGALGMSLQGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQ 125
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A TI C+ LTEP +GSD + + T A + WIL G+K WI N + A V
Sbjct: 126 KQRWLPGMAAGETIGCFGLTEPDHGSDPAGMRTYAERDGTDWILTGRKMWITNGSVAGVA 185
Query: 216 VIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V++AR T + I G++V D PG + +I +K LR +++L V +P + LP
Sbjct: 186 VVWARTDETAGGSGIRGFVVPTDTPGFSAPEIRHKWSLRASVTSELVLDGVRLPADAVLP 245
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 246 EATGLRGPLSCLSHARYGIVWGAMGAARASFEAAVDYARTREQFGRPIGGFQLTQAKLAD 305
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 306 MAVELHKGILLAHHLGRRLDAGRLRPEQVSFGKLNNVREAIEICRTSRTILGANGISLEY 365
Query: 393 LVAK 396
V +
Sbjct: 366 PVMR 369
>gi|295839022|ref|ZP_06825955.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
gi|197697636|gb|EDY44569.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
Length = 395
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 183/352 (51%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGT 104
D DDLL++EE+AVR VR + + P +A ++E+ E P + +LG+L + G
Sbjct: 13 DLAGIDDLLSAEEKAVRETVRRLCDASVEPHIAGWYERGELPGVRELARELGSLGLLGMH 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S +A E+ D+ + + V SLAM I GSEEQK+++LP +A
Sbjct: 73 LEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMYAIHRFGSEEQKREWLPRMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + T A + W+L+G+K WI N + A V V++AR T
Sbjct: 133 AGEAIGCFGLTEPDHGSDPGGMRTRARRDGSDWVLDGRKMWITNGSVASVAVVWAR--TE 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG + + +K LR ++LL V +P + LPGV + L
Sbjct: 191 EGVRGFVVPADTPGFSAPPLAHKGSLRASVTSELLLDGVRLPADAVLPGVTGLRGPLSCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y KER+QFG PLA FQ+ Q KL M + L+
Sbjct: 251 NEARYGILWGALGAARTCFRTALAYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P SLGK +A E R +LG NGI +F V +
Sbjct: 311 LHLGRRKDTVGLRPEQVSLGKLNNVNKALEIARSSRTILGANGISFEFPVMR 362
>gi|455650518|gb|EMF29289.1| acyl-CoA dehydrogenase [Streptomyces gancidicus BKS 13-15]
Length = 396
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 187/363 (51%), Gaps = 6/363 (1%)
Query: 38 ASKFPPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIP 93
AS PP +D DDLL E+ A+R VR + P +A+++EK E P +
Sbjct: 3 ASAKPPAFDPADPLGLDDLLEPEDLAIRDTVRGWAADRVLPYVADWYEKGELPGIRELAR 62
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+LG + G ++ GYGC G S +A E+ D+ + + V SLAM I GSE
Sbjct: 63 ELGGIGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSE 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQKQ++LP +A I C+ LTEP +GSD +++ T A + W+L G+K WI N + A
Sbjct: 123 EQKQRWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKRDGSDWVLNGRKMWITNGSVAG 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++A+ T + I G+ V DAPG + +I++K LR ++++ V +P + LPG
Sbjct: 183 VAVVWAQ--TDDGIRGFAVPTDAPGFSAPEIKHKWSLRASVTSELVMDDVRLPADAVLPG 240
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
V + L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M
Sbjct: 241 VTGLKGPLSCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAKLADM 300
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 301 AVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYP 360
Query: 394 VAK 396
V +
Sbjct: 361 VMR 363
>gi|333369247|ref|ZP_08461378.1| glutaryl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
gi|332974475|gb|EGK11398.1| glutaryl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
Length = 396
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 188/354 (53%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + D LT EEQ V+ + + E+ P + + F +++ K+G L + G TI
Sbjct: 14 SDPFLLRDQLTEEEQIVQKSAHDFCQAELMPGIVQANRHEIFDRNIMRKMGELGLLGMTI 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S + EI VD+ + + V SSL M I G+E QK+KYLP LA
Sbjct: 74 EGYGCAGLSHVAYGVVAREIEAVDSGYRSAMSVQSSLVMHPIWAYGTEAQKEKYLPKLAS 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ T A KV+GG+ L+G K WI NS ADV V++A++ +
Sbjct: 134 GEYVGCFGLTEPDAGSDPGSMKTRAKKVDGGYQLKGSKMWITNSPIADVFVVWAKD-DDD 192
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K GL+ KIE K LR G+I++ VFVP+E+ P + + L
Sbjct: 193 DIRGFVLEKGMKGLSAPKIEGKFSLRASITGEIVMDDVFVPEENAFPDIRGLKGPFGCLN 252
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +RKQF PLAA Q+ Q KL M I +
Sbjct: 253 KARYGIAWGSMGAAEFCWKAARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAAL 312
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++ P S+ K +A + R++ GGNG+ +F V + +M
Sbjct: 313 RVGRLMDEHNAAPEMISIIKRNNCGKALNIARVARDMHGGNGVSDEFHVIRHLM 366
>gi|239918433|ref|YP_002957991.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|281415370|ref|ZP_06247112.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239839640|gb|ACS31437.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 400
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 189/362 (52%), Gaps = 16/362 (4%)
Query: 43 PCASDYYQFDDLLTSEEQA----VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
P DY T E++ R RE +E+ + +W++AE+P ++ + G L
Sbjct: 14 PLDVDYLDAFGEATDEDRTHWDRARAYGREVLER-----IDGHWDRAEYPLDLVARAGEL 68
Query: 99 RVAGGTIKGYGCPGHSVT---GAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
+ G PGH+V A + EI+R D S + V L + + C EQ
Sbjct: 69 DL---LTDGLEVPGHAVMSPLAAGLVAMEISRADGSMAAAAAVQGGLVLRALVHCAGPEQ 125
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTAT-KVEGGWILEGQKRWIGNSTFADV 214
K++YL +A+ +ALTEP +GSD+ +L T+A GGW+L G K+WIGN +
Sbjct: 126 KERYLAPVARGTLPGGFALTEPLHGSDSVSLETSARPDGAGGWVLNGAKKWIGNGAAGGI 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+++AR+T Q+ G++V++ PG I K LR + +I L V V D+ RLPGV
Sbjct: 186 TIVWARDTEDGQVKGFVVEQSTPGYEAEVITGKGALRAIHQAEITLTDVRVGDDARLPGV 245
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+F+D ++VL +RV V W +G + +++ Y ++R+QFG PL A Q+ Q++L QML
Sbjct: 246 ATFKDAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLGAHQMVQERLAQML 305
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ AM + +L G + ASL K T AR + R++LGGNGIL + V
Sbjct: 306 DEVTAMQTRCVAVARLQAAGRLRDEQASLLKYACTRGARRVAQIARDMLGGNGILLEHRV 365
Query: 395 AK 396
+
Sbjct: 366 MR 367
>gi|17545475|ref|NP_518877.1| glutaryl-CoA dehydrogenase [Ralstonia solanacearum GMI1000]
gi|17427767|emb|CAD14286.1| probable glutaryl-coa dehydrogenase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 435
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 208/400 (52%), Gaps = 14/400 (3%)
Query: 14 KNARSSYFNLPALDISVAFPQATPASKFPPCAS----------DYYQFDDLLTSEEQAVR 63
+N R ++ P +V + T P + D D LT +E+ VR
Sbjct: 6 RNCRRLRYDKPKFRNTVPYYGTTVQRSDPETTAMTARNAFHWADPLLLDAQLTDDERMVR 65
Query: 64 MKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAI 122
+ ++ P + E + + + ++GAL + G TI + YG PG + +
Sbjct: 66 DAAAAYAQDKLMPRVLESFRHEKTDTAIFREMGALGMLGPTIPEQYGGPGLNYVSYGLIA 125
Query: 123 AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSD 182
E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I C+ LTEP +GSD
Sbjct: 126 REVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSD 185
Query: 183 ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---NTTTNQINGYLVKKDAPGL 239
+++ T A KV+GG+ L G K WI NS ADV V++A+ + +QI G++++K GL
Sbjct: 186 PASMVTRAKKVDGGYSLSGAKMWITNSPIADVFVVWAKLPDDNGEDQIRGFILEKGWKGL 245
Query: 240 TVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299
+ I K+GLR G+I+L +VFVP+E+ +PGV+ + L +R +AW +G +
Sbjct: 246 SAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVHGLKGPFTCLNSARYGIAWGALGAA 305
Query: 300 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPG 359
+ +Y+ +R QFG PLAA Q+ Q+KL M I + RL ++ ++G
Sbjct: 306 ESCWHTARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE 365
Query: 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
S+ K +A + + R++LGGNGI +F V + ++
Sbjct: 366 ITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVV 405
>gi|29833084|ref|NP_827718.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29610206|dbj|BAC74253.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
Length = 391
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 191/361 (52%), Gaps = 7/361 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLG 96
+ F P +D+ DDLL +E+ A+R VR + + P +AE++E E P + +LG
Sbjct: 2 TAFDP--ADFLGIDDLLDAEDLAIRDTVRTWAAQRVLPYVAEWYENGELPGIRDLARELG 59
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
A+ G ++ GYGC G S +A E+ D+ + + V SLAM + GSEEQK
Sbjct: 60 AIGALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYALHRFGSEEQK 119
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVL 215
Q++LP +A + I C+ LTEP +GSD +++ T A + GG W+L G+K WI N + A V
Sbjct: 120 QEWLPRMASGDVIGCFGLTEPDHGSDPASMRTYAKRESGGDWVLNGRKMWITNGSVAGVA 179
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A+ + + I G++V DAPG + +I++K LR +++L V +P LP V
Sbjct: 180 VVWAQ--SDDGIRGFVVPTDAPGFSAPEIKHKWSLRASVTSELVLDDVRLPAAAVLPEVT 237
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M
Sbjct: 238 GLKGPLSCLSHARYGIVWGAMGAARASFEAAVEYAKTREQFGRPIGGFQLTQAKLADMAV 297
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
+ IL+ L + + G + P S GK A E R +LG NGI ++ V
Sbjct: 298 ELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVM 357
Query: 396 K 396
+
Sbjct: 358 R 358
>gi|410583712|ref|ZP_11320817.1| acyl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
gi|410504574|gb|EKP94084.1| acyl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
Length = 386
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 2/347 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DYY+ DL T EE+ ++ + R +E E AP +A +WE+ FP H+IP+ G L + G T+
Sbjct: 5 DYYRVADLFTPEERLIQEETRRFLEAEAAPHIARWWEEGTFPRHLIPRFGELGLLGATLP 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G S + + E+ R+D+ +F V SSL M I GSEEQ+++YLP LA+
Sbjct: 65 EAYGGAGASSIAYGLIMYELERIDSGLRSFASVQSSLVMYPIYRYGSEEQRREYLPKLAR 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD ++ T A K +++ G+K WI N A + V++A++
Sbjct: 125 GELIGCFGLTEPDGGSDPGSMKTRARKDGSSYVITGRKMWITNGNLAHIAVVWAKD-DEG 183
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V D PG +I +K+ LR +++L +V V LP L
Sbjct: 184 VIRGFIVPTDTPGFRAREIPHKMSLRASVTSELILDEVRVDAAQMLPEARGLGAALSCLT 243
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W G V+ + + R FG P+A Q+ Q KLV+M+ +L+ W
Sbjct: 244 QARYGITWGAAGAIDAVFHEALEFARHRVTFGRPIAERQLVQAKLVEMVQAHTQALLMSW 303
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
RL KL ++ +T SL K A + RE+LGG+GI ++
Sbjct: 304 RLGKLKDEDKLTYAQVSLAKRSNVRAALQAARSAREILGGSGITLEY 350
>gi|323524855|ref|YP_004227008.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|407712227|ref|YP_006832792.1| glutaryl-CoA dehydrogenase [Burkholderia phenoliruptrix BR3459a]
gi|323381857|gb|ADX53948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|407234411|gb|AFT84610.1| glutaryl-CoA dehydrogenase [Burkholderia phenoliruptrix BR3459a]
Length = 396
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDTI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 363
>gi|121608699|ref|YP_996506.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121553339|gb|ABM57488.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
EF01-2]
Length = 398
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 190/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+++E+ VR ++ +AP + E + + + ++GA+ + G TI
Sbjct: 10 DPFLLEQQLSNDERMVRDAAAAYCQERLAPRVLEAFRHEKMDTGIFREMGAMGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + E+ RVD+ + V SSL M+ I G+E Q+QKYLP LA
Sbjct: 70 EQYGGPGLGYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIHEFGTEAQRQKYLPPLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-- 223
I C+ LTEP +GSD A+ T A KV GG+ LEG K WI NS AD+ V++A+ +
Sbjct: 130 GAAIGCFGLTEPDHGSDPGAMATRAHKVAGGYRLEGSKMWITNSPVADLFVVWAKEVSEA 189
Query: 224 --TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K PGL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 190 GAVGPIRGFVLEKGMPGLSAPAIHGKVGLRTSVTGEIVMDAVFVPEENAFPDVQGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHRARQYTLERKQFGRPLAANQLVQKKLADMQTEIAIGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R+++GGNGI +F VA+
Sbjct: 310 QACLRLGRMKDEGTAAVEATSIIKRNSCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|421591835|ref|ZP_16036620.1| glutaryl-CoA dehydrogenase [Rhizobium sp. Pop5]
gi|403702608|gb|EJZ19115.1| glutaryl-CoA dehydrogenase [Rhizobium sp. Pop5]
Length = 395
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++AP + E + K + + ++G L + G TI
Sbjct: 11 TDPFRLVEQLTGEERMVQETAHAYAQEKLAPRVLEAFRKEKTDPEIFREMGELGLLGPTI 70
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ RVD+ + + V SSL ML I GSE QK KYLP LA
Sbjct: 71 SADYGGSGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMLPIETFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 SGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A + R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALDIARAARDMLGGNGISDEFGIAR 361
>gi|452956137|gb|EME61530.1| glutaryl-CoA dehydrogenase [Amycolatopsis decaplanina DSM 44594]
Length = 390
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 184/355 (51%), Gaps = 3/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVA 101
P D+ D L++E++A+R VR ++ P +AE++E P + K G L +
Sbjct: 5 PDPRDFLDLDAELSAEDRAMRDAVRSYAHDQLLPNVAEWYETGALPAAELAKGFGQLGLL 64
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G ++GYGC G S IA E+ VD+ +F+ V SLAM I G+EEQKQ++LP
Sbjct: 65 GMHLEGYGCAGTSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHEWGTEEQKQEWLP 124
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+A + C+ LTEP GSD ++ T A + W+L G K WI N T ADV V++A+
Sbjct: 125 RMAAGEALGCFGLTEPDAGSDPGSMRTRAVRDGSDWVLSGTKMWITNGTVADVAVVWAQ- 183
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T + G++V + PG T ++++K+ LR +++L V +PD P V +
Sbjct: 184 -TDEGVRGFVVPTNTPGFTANEVKHKLSLRASLTAELVLDGVRLPDSAAFPEVRGLRGPL 242
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + +G + Y+ Y R+QFG PLA FQ+ Q+KL ++ +
Sbjct: 243 SCLNEARYGILFGVVGAARSCYESALEYTLSREQFGKPLAGFQLTQRKLADLVVEVNRAG 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
LV R+ +L + G + H S GK A E R +LG NGI ++ V +
Sbjct: 303 LVALRIGRLKDAGTLHHNHVSFGKLANVRSALEVARTARAMLGANGISLEYPVMR 357
>gi|41409976|ref|NP_962812.1| FadE7 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|440779345|ref|ZP_20958067.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S5]
gi|41398809|gb|AAS06428.1| FadE7 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|436720138|gb|ELP44436.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S5]
Length = 398
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 185/362 (51%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D LL+ +E+AVR VR + + P +AE++E + P + +
Sbjct: 6 STKTPPSFDRYDPLGLDALLSDDERAVRDTVRGFCAEHVLPHVAEWFEIGDLPVRELARE 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 66 FGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIWNFGSEE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP +A + C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV
Sbjct: 126 QKRQWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLDGRKLWITNGSVADV 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + I G+LV D PG T I +K+ LR +++L V +P E LPG
Sbjct: 186 AVVWA--GTDDGIRGFLVPTDTPGFTANTIHHKLSLRASITSELVLDDVRLPGEAMLPGA 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 244 TGLRGPLSCLSEARYGIIWGARGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 304 VELHKGQLLSLHLGRLKDSTGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 363
Query: 395 AK 396
+
Sbjct: 364 IR 365
>gi|453050921|gb|EME98443.1| acyl-CoA dehydrogenase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 425
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 189/366 (51%), Gaps = 8/366 (2%)
Query: 37 PASKFPPCASDYYQ---FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHV 91
P P A D Y DDLLT E++AVR +R+ + P +AE++E+ E P +
Sbjct: 29 PVKPAKPAAFDPYDPLGIDDLLTDEDRAVRATMRQWAADRVLPHIAEWYERGELPGIREL 88
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+LG+L G ++ GYGC G S +A E+ D+ + + V SLAM I G
Sbjct: 89 ARELGSLGALGMSLTGYGCAGASAVQYGLACLELEAADSGVRSLVSVQGSLAMYAIHRFG 148
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNST 210
SEEQK+++LP +A TI C+ALTEP +GSD + + T A + GG W+L G+K WI N +
Sbjct: 149 SEEQKRRWLPPMAAGETIGCFALTEPDHGSDPAGMRTHAKREAGGDWVLTGRKMWITNGS 208
Query: 211 FADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR 270
A V V++AR T I G++V D PG + +I++K LR +++L V +P +
Sbjct: 209 VAGVAVVWAR--TDEGIRGFVVPTDRPGFSAPEIKHKWSLRASVTSELVLDGVRLPADAV 266
Query: 271 LPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
LP + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 267 LPEAVGLRGPLSCLSHARYGIVWGAMGAARASFEAALDYARTREQFGRPIGGFQLTQAKL 326
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILS 390
M + +L+ L + G + P S GK A E R +LG NGI
Sbjct: 327 ADMAVELHKGVLLAHHLGLRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISL 386
Query: 391 DFLVAK 396
++ V +
Sbjct: 387 EYPVMR 392
>gi|170691314|ref|ZP_02882479.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
gi|170143519|gb|EDT11682.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
Length = 396
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDAI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 363
>gi|395213448|ref|ZP_10400214.1| glutaryl-CoA dehydrogenase [Pontibacter sp. BAB1700]
gi|394456717|gb|EJF10978.1| glutaryl-CoA dehydrogenase [Pontibacter sp. BAB1700]
Length = 392
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 183/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E +R +R+ ++KEI+P + ++ + A FP ++ K G + G T
Sbjct: 8 APDYYNIDDLLTEEHLLIRQTLRDFVKKEISPNIEQWAQDAHFPSEIVKKFGDVGAFGPT 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G I + EI R D+ + V SL M I GSEEQ++KYLP L
Sbjct: 68 IPAEYGGGGLDYISYGIIMQEIERGDSGMRSTASVQGSLVMYPIYAYGSEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GS+ + T + ++L G K WI NS V V++A+N
Sbjct: 128 ASGEWLGCFGLTEPDHGSNPGGMTTNIKDMGDHYLLNGSKMWISNSPECQVAVVWAKNEQ 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G + +I NK LR G+++ V VP E+ LP V +
Sbjct: 188 -GRIKGLIVERGMEGFSTPEIHNKWSLRASCTGELVFDNVKVPKENLLPNVEGLRGPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG+++ Y+ +Y ER QF P+ AFQ+ Q+KL +ML I L+
Sbjct: 247 LDSARYGIAWGAIGVAIDCYESARKYAMERIQFDKPIGAFQLVQKKLAEMLTEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++ GG GI ++ + + +M
Sbjct: 307 VWRLGTLKNEGKATTQQISMAKRNNVDMALHIAREARQIHGGMGITGEYPIMRHMM 362
>gi|294628581|ref|ZP_06707141.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
gi|292831914|gb|EFF90263.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
Length = 398
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 5/365 (1%)
Query: 35 ATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHV 91
A+ S PP +D DDLL E+ AVR VR + P +AE++E+ E P +
Sbjct: 3 ASSKSSLPPFDPTDPLGIDDLLEPEDLAVRDTVRGWAADRVLPHIAEWYERGELPGIREL 62
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+LGA+ G ++ GYGC G S +A E+ D+ + + V SLAM + G
Sbjct: 63 ARELGAIGALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFG 122
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTF 211
SEEQKQ++LP +A I C+ LTEP +GSD +A+ T A + W+L G+K WI N +
Sbjct: 123 SEEQKQRWLPVMAAGEVIGCFGLTEPDHGSDPAAMRTHAKRDGSDWVLNGRKMWITNGSV 182
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
A V V++A+ T + I G+ V D PG + +I++K LR +++L V +P + L
Sbjct: 183 AGVAVVWAQ--TEDGIRGFAVPTDTPGFSAPEIKHKWSLRASVTSELVLDDVRLPADAVL 240
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
P V + L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL
Sbjct: 241 PEVTGLRGPLSCLSHARYGIVWGAMGAARSSFEAAVEYAKSREQFGRPIGGFQLTQAKLA 300
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
M + IL+ L + + G + P S GK A E R +LG NGI +
Sbjct: 301 DMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLE 360
Query: 392 FLVAK 396
+ V +
Sbjct: 361 YPVMR 365
>gi|436836110|ref|YP_007321326.1| acyl-CoA dehydrogenase domain protein [Fibrella aestuarina BUZ 2]
gi|384067523|emb|CCH00733.1| acyl-CoA dehydrogenase domain protein [Fibrella aestuarina BUZ 2]
Length = 408
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A D+YQ DDLLT E++ VR +R +++EI P + + ++ EFP ++PK G + G T
Sbjct: 24 APDFYQIDDLLTPEQKLVRSAMRTFVKREITPTIDDCAQRGEFPETIVPKFGQIGAFGPT 83
Query: 105 IK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ G G + + EI R D++ + + V SSL M I GS+EQK YLP L
Sbjct: 84 LPVEVGGGGLDQISYGLMMQEIERGDSALRSTVSVQSSLVMYPIWAFGSDEQKAHYLPRL 143
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A+ + C+ LTE +GS+ + + + ++L G K WI N+ AD+ +++A+N
Sbjct: 144 AKGELLGCFGLTEANHGSNPGGMESAFIERSDYYLLNGSKLWITNAPIADIAIVWAKNEQ 203
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G + IE K LR + G+++ + V VP + LP + +
Sbjct: 204 -GKIRGLIVERGMEGFSTNDIERKWSLRASRTGELIFQDVKVPKTNMLPDAIGLKAPLQC 262
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M Y+ RY ER QF P+A+FQ+ Q+KL +ML +I LV
Sbjct: 263 LDQARYGIAWGAVGAAMDCYETARRYTLERIQFDKPIASFQLVQKKLAEMLTDITKAQLV 322
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L A T S+ K A R+LLGG GI D+ + + +M
Sbjct: 323 CWRLGTLKNNDAATTAQISMAKRDNVDMALRVARTCRQLLGGMGITGDYPIMRHMM 378
>gi|417748154|ref|ZP_12396603.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S397]
gi|336460381|gb|EGO39281.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S397]
Length = 398
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 185/362 (51%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D LL+ +E+AVR VR + + P +AE++E + P + +
Sbjct: 6 STKTPPSFDRYDPLGLDALLSDDERAVRDTVRGFCAEHVLPHVAEWFEIGDLPVRELARE 65
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 66 FGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIWNFGSEE 125
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP +A + C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV
Sbjct: 126 QKRQWLPGMATGELLGCFGLTEPDVGSDPAAIKTRARRDGSDWVLDGRKLWITNGSVADV 185
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + I G+LV D PG T I +K+ LR +++L V +P E LPG
Sbjct: 186 AVVWA--GTDDGIRGFLVPTDTPGFTANTIHHKLSLRASITSELVLDDVRLPGEAMLPGA 243
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 244 TGLRGPLSCLSEARYGIIWGARGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 303
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 304 VELHKGQLLSLHLGRLKDSTGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 363
Query: 395 AK 396
+
Sbjct: 364 IR 365
>gi|409080776|gb|EKM81136.1| hypothetical protein AGABI1DRAFT_56516 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 420
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 182/350 (52%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT+EE A+R E ++++ P + W EF +IP++G + + G TIK
Sbjct: 37 DPLNLESQLTAEEIAIRDTAHEYCQEKLMPRVLHQWRTEEFDHTLIPEMGQVGLLGPTIK 96
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E RVD+ + V SSL M I GSE QK+KYLP LA+
Sbjct: 97 GYGCAGVSDVAYGLIAREFERVDSGYRSTSSVQSSLVMHPIHEFGSEAQKEKYLPRLAKG 156
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I + LTEP +GSD + TTA +V+GG+++ G K WI NS ADV VI+A+ N+
Sbjct: 157 EIIGAFGLTEPDHGSDPGGMETTAEEVDGGFVVNGSKTWISNSPVADVFVIWAKCKWDNR 216
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+L++K A GLT I+NKI LR+ G + + V V + LPG L
Sbjct: 217 IRGFLLEKGAKGLTAPPIKNKIALRVSLTGSVFMDNVRVGLDSLLPGSKGLGSAFACLNS 276
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G D Y +RKQFG P+A+FQ+ Q+KL I + +
Sbjct: 277 ARYGISWGVMGALEDCLDRTRDYALQRKQFGRPIASFQLIQKKLADAQTEIALGLQASLQ 336
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ KL +G + P +L K +A + ++ GGN ++ V +
Sbjct: 337 VGKLKGEGKLAPEMINLIKRNNCGKALQQSRALLDVFGGNACADEYHVGR 386
>gi|339628137|ref|YP_004719780.1| acyl-CoA dehydrogenase [Sulfobacillus acidophilus TPY]
gi|379007770|ref|YP_005257221.1| glutaryl-CoA dehydrogenase [Sulfobacillus acidophilus DSM 10332]
gi|339285926|gb|AEJ40037.1| acyl-CoA dehydrogenase domain protein [Sulfobacillus acidophilus
TPY]
gi|361054032|gb|AEW05549.1| Glutaryl-CoA dehydrogenase [Sulfobacillus acidophilus DSM 10332]
Length = 391
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 182/356 (51%), Gaps = 4/356 (1%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
+ F D+Y + E R VR+ + I P +W + FP H+I ++ L
Sbjct: 2 TAFEARREDFYGLEADYPPESVQARDMVRQWVTDHIRPQAGSWWLEGRFPTHLIEEMARL 61
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
V G T+ + YG S + + E+ R D+ +F V S LAM I GSEEQKQ
Sbjct: 62 GVFGPTLPEVYGGSEASALTYGLMMQELERGDSGLRSFASVQSGLAMYAIYRYGSEEQKQ 121
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
YLP +A I C+ LTEP GSD A+ TTA + + G+IL+G KRWI N T ADV VI
Sbjct: 122 TYLPRMAAGQVIGCFGLTEPDAGSDPGAMRTTARRSDRGFILQGAKRWITNGTLADVAVI 181
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ + G++V D PG T +I K +R+ ++ + +V V + LP
Sbjct: 182 WAKD-EAGIVRGFIVPTDTPGFTAREIHTKASMRMSVTAELYMDQVEVSPDAILPAAEGL 240
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
L +R +AW +G ++ D Y K R FG P+AA Q+ Q++L ML +
Sbjct: 241 GAPLGCLTQARYGIAWGTVGAALDCLDTSVTYTKSRIAFGRPIAATQLVQERLADMLSEV 300
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA-LGRELLGGNGILSDF 392
AM L +L +LYE G + SL K AR TVA + RELLGGNGI D+
Sbjct: 301 VAMQLRARQLARLYETGRLRYPQVSLAKR-DNARGALTVARMARELLGGNGISVDY 355
>gi|56477122|ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
gi|56313165|emb|CAI07810.1| Glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
Length = 395
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 192/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D+ LT E+ VR R ++ + P + E + + + ++G L + G TI
Sbjct: 11 ADPLHLDEQLTETERLVRDTARAYSQERLLPRVQEAFRHEKTDRAIFNEMGELGLLGATI 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I G+E QK+KYLP LA
Sbjct: 71 PEEYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKKKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++
Sbjct: 131 TGEWVGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKDDE- 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
QI G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V + L
Sbjct: 190 GQIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPTVRGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ +Y +RKQFG PLAA Q+ Q+KL ML I +
Sbjct: 250 NSARFGIAWGALGAAEACYETARQYTLDRKQFGRPLAANQLIQKKLADMLTEITLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 310 LRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFCVAR 361
>gi|318059918|ref|ZP_07978641.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
gi|318077525|ref|ZP_07984857.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
Length = 395
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 179/352 (50%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGT 104
D DDLL+ EE+AVR VR+ + + P +AE++E E P + +LG+L + G
Sbjct: 13 DLAGIDDLLSPEEKAVRQAVRQVCDASVEPYIAEWYESGELPAVRELAEELGSLGLLGMH 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S +A E+ D+ + + V SLAM I GSEEQK+++LP +A
Sbjct: 73 LEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMYAIHRFGSEEQKREWLPRMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + T A + W+L+G+K WI N + A V V++AR
Sbjct: 133 TGEAIGCFGLTEPDHGSDPGGMRTRARRAGDDWVLDGRKMWITNGSVASVAVVWAR--AE 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D PG + I +K LR ++LL V +P + LP V + L
Sbjct: 191 EGVRGFVVPTDTPGFSAPPITHKGSLRASVTSELLLDGVRLPADAVLPEVTGLRGPLSCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y KER QFG PLA FQ+ Q KL M + L+
Sbjct: 251 NEARYGILWGALGAARSCFRTALSYAKERDQFGKPLAGFQLTQAKLADMAVELTNGTLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P SLGK +A R +LG NGI +F V +
Sbjct: 311 LHLGRRKDTVGLRPEQVSLGKLNNVNKALAIARTSRTILGANGISLEFPVMR 362
>gi|302529097|ref|ZP_07281439.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
gi|302437992|gb|EFL09808.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
Length = 396
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 186/359 (51%), Gaps = 5/359 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGA 97
PP D DL T +E+A+ VR + I P + +++E+ E P + LG
Sbjct: 7 LPPLDPRDPAGLGDLFTEDEKAIAAAVRRVCAERIDPYVGDWFERGELPDVRGLAKDLGT 66
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L V G ++GYGC G S T +A E+ D+ + + V SLAM I GSEEQKQ
Sbjct: 67 LGVLGMHLEGYGCAGMSATEYGLACLELEASDSGIRSLVSVQGSLAMFAIWKWGSEEQKQ 126
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LPS+A I C+ LTEP GSD +++ T A + W+L+G+K WI N + ADV V+
Sbjct: 127 QWLPSMAAGEAIGCFGLTEPDAGSDPASMRTRARRDGDDWVLDGRKMWITNGSVADVAVV 186
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A+ T + G++V D PG + +I++K+ LR +++L V +P + LP V
Sbjct: 187 WAQ--TDKGVRGFVVPTDTPGFSAPEIKHKLSLRASITSELVLDGVRLPADAVLPEVTGL 244
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + W +G + Y ++R QFG P++AFQ+ QQKLV M
Sbjct: 245 KGPLSCLNEARFGIVWGSVGAARSCLQAAMSYAEDRTQFGKPISAFQLTQQKLVDMTLEY 304
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L+ L + + G + P SLGK A E R +LG NGI ++ V +
Sbjct: 305 TKALLLAIHLGRRKDAGVLRPEQVSLGKLNNVREAIEICRTARTILGANGISLEYPVIR 363
>gi|256421270|ref|YP_003121923.1| acyl-CoA dehydrogenase domain-containing protein [Chitinophaga
pinensis DSM 2588]
gi|256036178|gb|ACU59722.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
2588]
Length = 392
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 185/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DY+ D LLT E VR VR+ ++KEI+PI+ + ++A FP +I LG L G T
Sbjct: 8 SPDYFHVDGLLTEEHLMVRDAVRQWVKKEISPIIEDACQQASFPSQIIKGLGELGCFGPT 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + E+ R D+ + V SL M I G+E QK+KYLP L
Sbjct: 68 IPQEYGGGGMDHIAYGLMMQELERGDSGVRSTASVQGSLVMYPIFTYGNEAQKRKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GSD ++ T IL G K WI N+ FA + V++A++
Sbjct: 128 ASGEWMGCFGLTEPDFGSDPGSMITHFKDAGDHVILNGAKMWISNAPFAQIAVVWAKDEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G +V++ G + + + K LR G+++ V VP E+ LP +
Sbjct: 188 -GKIRGLIVERGMEGFSTPETKGKWSLRASATGELVFDNVKVPKENILPDAKGLKGPLSC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L+ +R +AW G +M YD+ RY KER QFG P+A FQ+ Q+KL +M+ I L+
Sbjct: 247 LSSARYGIAWGVTGAAMDCYDIALRYAKERIQFGKPIAGFQLTQKKLAEMVTEITKAQLM 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L +G T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 NWRLGVLKNEGKATAAQISMAKRNACEIATRIARDARQILGGMGITGEYPIMRHMM 362
>gi|187927802|ref|YP_001898289.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
pickettii 12J]
gi|187724692|gb|ACD25857.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
Length = 397
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 197/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTDDERMVRDAAASYCQDKLMPRVLESFRHEKTDASIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMITRARKVDGGYSLSGAKMWITNSPIADVFVVWAKLPND 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K GLT I K+GLR G+I+L +VFVP+E+ +PGV +
Sbjct: 190 NGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|187922781|ref|YP_001894423.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187713975|gb|ACD15199.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
PsJN]
Length = 396
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYSQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEEDGKDAI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 363
>gi|302561455|ref|ZP_07313797.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
gi|302479073|gb|EFL42166.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
Length = 394
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 185/362 (51%), Gaps = 6/362 (1%)
Query: 39 SKFPPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPK 94
S PP +D DDLL EE AVR VR + P +A+++EK E P + +
Sbjct: 2 SAKPPAFDPADPLGLDDLLEPEELAVRDTVRTWAADRVLPYVADWYEKGELPGIRELARE 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG + G ++ GYGC G S +A E+ D+ + + V SLAM + GSEE
Sbjct: 62 LGGIGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGSEE 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+ +LP +A I C+ LTEP +GSD ++ T A + G W+L G+K WI N + A V
Sbjct: 122 QKRHWLPRMASGEVIGCFGLTEPDHGSDPGSMRTHAKRDGGDWVLNGRKMWITNGSVAGV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++AR T + I G++V DAPG + +I++K LR +++L V +P + LP V
Sbjct: 182 AVVWAR--TDDGIRGFVVPTDAPGFSAPEIKHKWSLRASVTSELVLDDVRLPADAVLPEV 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M
Sbjct: 240 TGLKGPLGCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAKLADMA 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ +L+ L + + G + P S GK A E R +LG NGI ++ V
Sbjct: 300 VELHKGLLLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTVLGANGISLEYPV 359
Query: 395 AK 396
+
Sbjct: 360 MR 361
>gi|311747232|ref|ZP_07721017.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
gi|126578944|gb|EAZ83108.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
Length = 398
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D+ Q DDLLT E +R +R+ ++KEI+P + + +KA FP ++ K G + G +
Sbjct: 16 DFLQIDDLLTEEHLLIRNSMRDFVKKEISPYIENWSQKAHFPTEIVKKFGEVGAFGPQLP 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + + EI R D+ + V SL M I GSEEQ++KYLP LA
Sbjct: 76 EEYGCGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYKFGSEEQRKKYLPKLAS 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ + C+ LTEP +GS+ S + T + ++L G K WI NS AD+ V++A+N
Sbjct: 136 GDMLGCFGLTEPDHGSNPSGMVTNFKDMGDYYLLNGAKMWISNSPEADIAVVWAKNEE-G 194
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I+G +V++ G T NK LR G+++ V VP E+ LP + L
Sbjct: 195 RIHGLIVERGMEGFTTPTTHNKWSLRASCTGELVFDNVKVPKENLLPNKSGLGAPLMCLD 254
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW IG +M Y+ +Y ER QF P+A+FQ+ Q+KL +ML I L+ W
Sbjct: 255 SARFGIAWGAIGAAMDCYESARKYAAERIQFDKPIASFQLVQKKLSEMLTEITKAQLLAW 314
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ K+ +G H S+ K A R++ GG GI ++ + + +M
Sbjct: 315 KVGKMMNEGKAKTVHISMAKRNNVEMALNIAREARQIHGGMGITGEYPIMRHMM 368
>gi|406699942|gb|EKD03135.1| Glutaryl-CoA dehydrogenase [Trichosporon asahii var. asahii CBS
8904]
Length = 417
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 190/377 (50%), Gaps = 4/377 (1%)
Query: 24 PALDISVAFPQATPASKFPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
P + A PQA +KF P D LLT E+QA+ R ++++ P + E W
Sbjct: 7 PQAALRAATPQARSMAKFAPYNWEDPLNMSSLLTEEQQAIHETARTYAQEKLVPRIKEGW 66
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
+ +++ ++G L + G TI+GYGC G + + E+ R D+ + + V SSL
Sbjct: 67 RTEKLDLNILKEMGELGLLGPTIQGYGCAGTDYISYGLIMREVERADSGFRSAMSVQSSL 126
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
M I GSE QK++YLP LA+ + + C+ LTEP +GSD S++ TTATK +GGW++ GQ
Sbjct: 127 VMTAINQFGSEAQKEQYLPGLAKADILGCFGLTEPNHGSDPSSMETTATKKDGGWVINGQ 186
Query: 203 KRWIGNSTFADVLVIFA---RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDIL 259
K WI N+ + D +I+A N +I G++V +DA + +I NK+ LR G +
Sbjct: 187 KTWITNAPYGDFFIIWATTVENGVRGKIRGFIVPRDAGDIQTPQITNKLALRGSVTGSVF 246
Query: 260 LKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAP 319
+ V +P E+ L N L +R ++W +G D Y ER QF P
Sbjct: 247 IDNVHIPAENVLEKSNGLGAPFSCLNHARYGISWGVMGALEDCIDKARTYALERHQFNRP 306
Query: 320 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALG 379
LA+FQ+ Q+KLV +L L +KG P S+ K A + +
Sbjct: 307 LASFQLVQKKLVDASSAATLGLLGSLHLGHQIDKGVYNPEMISILKRNNCGNALQHSRIL 366
Query: 380 RELLGGNGILSDFLVAK 396
++LGGN ++ + +
Sbjct: 367 LDILGGNACSDEYGIGR 383
>gi|226227877|ref|YP_002761983.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
gi|226091068|dbj|BAH39513.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
Length = 402
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 189/367 (51%), Gaps = 13/367 (3%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A P+ A+D + D LT EE+A+R +R+ +++++ P+M + + + FP +IP+
Sbjct: 3 ALPSVDLKAHAADLFNIDAALTEEERAIRDTIRQFVDEKLIPVMGDCYVEGRFPDELIPE 62
Query: 95 LGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
L L V G + + YGC G S + + E+ R D+ +F V +L M I GSE
Sbjct: 63 LAELGVLGANLPEEYGCAGLSSVAYGLIMQELERGDSGIRSFASVQGALVMYPIFAFGSE 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA-TKVEGGWILEGQKRWIGNSTFA 212
EQK+ YLP LA+ I C+ LTEP +GS+ S + T A + +G WIL G K WI N + A
Sbjct: 123 EQKRHYLPKLAKAEYIGCFGLTEPDFGSNPSGMITRARQQADGSWILNGAKMWITNGSKA 182
Query: 213 DVLVIFAR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
V V++A+ +T + I G++V D PG + K+ LR +++L V +P +
Sbjct: 183 HVAVVWAKTGDSTDDSSIRGFIVPTDTPGFQARDQKGKLSLRASDTSELVLSDVHLPADA 242
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
LP N + L +R ++W +G +M + Y K R F P+ FQI Q +
Sbjct: 243 ILPHSNGLKSPLMCLTQARYGISWGVLGAAMACLEEAVSYSKSRVMFDKPIGGFQIQQVR 302
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK----SWITARARETVALGRELLGG 385
L M + LV L +L + G TP SL K T ARET R LLG
Sbjct: 303 LADMFTELVKGQLVSLHLGRLKDAGNFTPVQVSLAKRNNCDIATNIARET----RRLLGA 358
Query: 386 NGILSDF 392
NGIL+++
Sbjct: 359 NGILAEY 365
>gi|401887412|gb|EJT51400.1| Glutaryl-CoA dehydrogenase, precursor [Trichosporon asahii var.
asahii CBS 2479]
Length = 417
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 190/377 (50%), Gaps = 4/377 (1%)
Query: 24 PALDISVAFPQATPASKFPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
P + A PQA +KF P D LLT E+QA+ R ++++ P + E W
Sbjct: 7 PQAALRAARPQARTMAKFAPYNWEDPLNMSSLLTEEQQAIHETARTYAQEKLVPRIKEGW 66
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
+ +++ ++G L + G TI+GYGC G + + E+ R D+ + + V SSL
Sbjct: 67 RTEKLDLNILKEMGELGLLGPTIQGYGCAGTDYISYGLIMREVERADSGFRSAMSVQSSL 126
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
M I GSE QK++YLP LA+ + + C+ LTEP +GSD S++ TTATK +GGW++ GQ
Sbjct: 127 VMTAINQFGSEAQKEQYLPGLAKADILGCFGLTEPNHGSDPSSMETTATKKDGGWVINGQ 186
Query: 203 KRWIGNSTFADVLVIFA---RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDIL 259
K WI N+ + D +I+A N +I G++V +DA + +I NK+ LR G +
Sbjct: 187 KTWITNAPYGDFFIIWATTVENGVRGKIRGFIVPRDAGDIQTPQITNKLALRGSVTGSVF 246
Query: 260 LKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAP 319
+ V +P E+ L N L +R ++W +G D Y ER QF P
Sbjct: 247 IDNVHIPAENVLEKSNGLGAPFSCLNHARYGISWGVMGALEDCIDKARTYALERHQFNRP 306
Query: 320 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALG 379
LA+FQ+ Q+KLV +L L +KG P S+ K A + +
Sbjct: 307 LASFQLVQKKLVDASSAATLGLLGSLHLGHQIDKGVYNPEMISILKRNNCGNALQHSRIL 366
Query: 380 RELLGGNGILSDFLVAK 396
++LGGN ++ + +
Sbjct: 367 LDILGGNACSDEYGIGR 383
>gi|319787343|ref|YP_004146818.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317465855|gb|ADV27587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 387
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 186/353 (52%), Gaps = 13/353 (3%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A D Y +L+ EE+AV+ V ++ + PI+ + +++ FP ++P++ +L + G +
Sbjct: 5 AYDLYDVRSMLSDEERAVQEAVARFTDERVLPIIGDCFDQGRFPKELVPEIASLGLLGSS 64
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGC G + + E+ R D+ +F+ V SSL M I GSEEQ++++LP +
Sbjct: 65 LPEEYGCAGLNAVSYGLICQELERGDSGLRSFVSVQSSLCMYPIYAYGSEEQRRQWLPRM 124
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP GSD + + T A K G W++ G K WI N AD+ +++A+ T
Sbjct: 125 AAGEVIGCFGLTEPHGGSDPANMKTHAKKDGGDWVINGSKMWITNGNLADIAIVWAQ--T 182
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V+K PG T +I++K+ LR + V VPD RLP V +
Sbjct: 183 DEGIQGFIVEKGTPGFTAQEIKHKMSLRASVTSSLFFDNVRVPDSARLPNVKGLKGPLGC 242
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W P+G ++ D Y KER FG P+AA Q Q KL M I L+
Sbjct: 243 LTQARYGITWGPVGAAIACLDEALNYSKERILFGRPVAATQSAQIKLADMARRITLAQLL 302
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITAR-----ARETVALGRELLGGNGILSD 391
+L +L + G M P SL K W R ARE R+LLGG GI ++
Sbjct: 303 VLQLGRLKDAGTMQPQQVSLAK-WNNCRMAIDIAREC----RDLLGGAGITTE 350
>gi|393777267|ref|ZP_10365559.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. PBA]
gi|392715608|gb|EIZ03190.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. PBA]
Length = 413
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 186/353 (52%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT EE+ +R R+ ++ + P + F ++ ++ L G +K
Sbjct: 26 DPFCLDAALTEEERMIRDAARDYAQERLMPRILMANRNESFDIEIMQEMADLGFLGAPLK 85
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + E RVD + + + V ++L+M+ I L GSEEQ++KYLP +A+
Sbjct: 86 GYGCAGVGYVAYGLIAREFERVDTAYRSALGVQTTLSMMPIYLFGSEEQREKYLPRMARA 145
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GSD + + A +V+GG+ L G K WI ++ AD++V++A++ N
Sbjct: 146 ELLGCFGLTEPDHGSDPGRMGSRAVRVDGGYRLTGAKTWITHAPIADLMVVWAKD-EANT 204
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+++++ GL KIE K +R G I + VFVPDE+ LP + L
Sbjct: 205 VRGFILERGMQGLATAKIEGKFSVRASPTGQIFMDDVFVPDENVLPNGVGLKAPFACLNN 264
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + W +G + + +Y ERKQFG PLAA Q+ Q+KL M I +L
Sbjct: 265 ARFGICWGAMGAAEFCWHAARQYTLERKQFGRPLAANQLIQKKLADMQTEITLGLLGCLH 324
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L +L + G P SL K +A + + R++ GGNGI ++ V + +M
Sbjct: 325 LSRLRDTGQAAPEAVSLLKRNCAGKALDIARMARDMHGGNGISDEYHVIRHLM 377
>gi|307728568|ref|YP_003905792.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
CCGE1003]
gi|307583103|gb|ADN56501.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
CCGE1003]
Length = 396
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDTI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G+++++ GL+ I +K+GLR G+I+L +VFVP+E+R P V+ + L +
Sbjct: 195 RGFILERGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 363
>gi|411001206|ref|ZP_11377535.1| acyl-CoA dehydrogenase [Streptomyces globisporus C-1027]
Length = 406
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 6/369 (1%)
Query: 34 QATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FH 90
++ SK PP A+D DDLL ++ A+R VR + P +AE++EK E P
Sbjct: 5 ESAKPSKLPPFDAADPLGIDDLLGPDDLAIRDTVRTWATDRVLPHIAEWYEKGELPGIRE 64
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
+ +LGAL G ++ GYGC G S +A E+ D+ + + V SLAM I
Sbjct: 65 LARELGALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRF 124
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
GSEEQKQ++LP +A I C+ LTEP +GSD + + T A + W+L G+K WI N +
Sbjct: 125 GSEEQKQRWLPGMASGEIIGCFGLTEPDHGSDPAGMRTYAKRHGEDWVLTGRKMWITNGS 184
Query: 211 FADVLVIFARNTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
A V V++A+ + I G++V DAPG + +I +K LR ++++ +V +P
Sbjct: 185 VAGVAVVWAQTDEGDDGRGIRGFVVPTDAPGFSAPEIHHKWSLRASVTSELVMDEVRLPA 244
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ LP + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q
Sbjct: 245 DAVLPDAKGLRGPLSCLSHARYGIVWGSMGAARASFESALDYARSREQFGRPIGGFQLTQ 304
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
KL M + IL+ L + + G + P S GK A E R +LG NG
Sbjct: 305 AKLADMALELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICRTSRTILGANG 364
Query: 388 ILSDFLVAK 396
I ++ V +
Sbjct: 365 ISLEYPVMR 373
>gi|227548732|ref|ZP_03978781.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079199|gb|EEI17162.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
44291]
Length = 396
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 4/345 (1%)
Query: 46 SDYYQ-FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+DYYQ F D+ + R K + P + + WEKAE+ I + +
Sbjct: 15 ADYYQVFADVDGDDLDWWRTA--RDYAKWVHPQVNDAWEKAEYNIPAIEEAARRGLIRDG 72
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I G S+ + E+AR DAS +T ++V + LAM +I GSEEQK+KYL +A
Sbjct: 73 IDIEGERPMSIRANRLVALELARCDASTATAVIVQAGLAMQSINSLGSEEQKKKYLGPMA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
++ +ALTEP +GSD+ AL TTA + W++ G+K+WIG+ + + V++AR
Sbjct: 133 RMEIRGAFALTEPDHGSDSVALETTAKRDGDDWVINGEKKWIGHGSVGHIAVVWAR-MDD 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V +DA G IE K LR + I L V VPD+ RLPG SF+DT+ VL
Sbjct: 192 GEVGGFIVDQDADGYHAETIEGKASLRGIPQAHITLNNVRVPDDRRLPGARSFRDTAAVL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R+ VAW +G+++ Y+ +Y ER QFG PL QI QQ+L ML ++ +M L
Sbjct: 252 GGTRLGVAWSALGMAIDCYEKALKYATERHQFGRPLNKNQIIQQRLADMLMDVTSMALYC 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
RL +L E G + A+L K T AR A R++ GG GIL
Sbjct: 312 KRLLELEETGQLNEKQAALAKVHNTRAARRVAANARDMFGGVGIL 356
>gi|209517637|ref|ZP_03266475.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
gi|209501933|gb|EEA01951.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
Length = 396
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 192/349 (55%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYAQDKLQPRVLEAFRHEKTDIEIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GS+ QK KYLP LA+ I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSDAQKDKYLPRLARGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEEDGNDNI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ + L +
Sbjct: 195 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENIMPGVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHISRQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 315 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|330826037|ref|YP_004389340.1| glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
gi|329311409|gb|AEB85824.1| Glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
Length = 398
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 188/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+A+R R + ++AP + + + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLTEDERAIRDAARAYCQDKLAPRVLDMFRHEKTDVSIFREMGELGLLGPTI 68
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I GSE QKQKYLP LA
Sbjct: 69 PAQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGSEAQKQKYLPRLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-- 222
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVEP 188
Query: 223 --TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
QI G+++ K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 189 SGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEIRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K +A + L R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|417107880|ref|ZP_11962713.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327189524|gb|EGE56679.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 395
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 192/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT+EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTNEERMVQDTAHAYAQQKLAPRVLDAFRNEKTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ AD+ V++A+ T
Sbjct: 131 AGEWIGCFGLTEPDHGSDPGSMATRARKVDGGYSLSGSKTWISNAPIADIFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 NLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|295396993|ref|ZP_06807111.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
gi|294974774|gb|EFG50483.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
Length = 401
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 188/360 (52%), Gaps = 7/360 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
FP D + LT E V ++ E +E + + E W P +G LR
Sbjct: 12 FP---EDILKISSGLTDGEIEVLKQLVELLESKYRSGLNEAWVTESEPEGFFEDIGNLRY 68
Query: 101 AGGTIKGYGCPGHSVTGAAIAIA---EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G G T ++R D S +T + VH+ L T GS EQ Q
Sbjct: 69 FDNPLLFEGREGKKTTSQLFQFFFAFTLSRFDVSLNTLLGVHTGLGFNTFLFGGSPEQVQ 128
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDAS-ALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
KY+P LA C+ALTEP +GSD + L T+A + WI+ G+KRWIG ++ ADV+
Sbjct: 129 KYIPKLASHQLRTCFALTEPNHGSDVAWGLETSARREGDKWIINGEKRWIGGASVADVIP 188
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
+FAR+ T + ++V+ GL + I+NKI L+IV N +I LK V V + DRL +NS
Sbjct: 189 VFARDEETGKPKCFIVQAGQAGLDIDVIQNKIALKIVPNANIHLKDVEVAESDRLQNINS 248
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
F+D +KVL +R VA G G +Y+ ERKQFG ++ +Q+ Q+KL M GN
Sbjct: 249 FKDIAKVLYSTRAGVANMATGAMAGALQASLKYVTERKQFGKEISNYQLVQEKLAMMQGN 308
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ A + + ++ + E+G S+GK R RETVA+GR + GGNGI+ D +A+
Sbjct: 309 LTAAMALCSQIARQQEEGDYNEVVTSVGKMMNALRLRETVAMGRGICGGNGIVVDNDIAR 368
>gi|148259868|ref|YP_001233995.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
cryptum JF-5]
gi|326403204|ref|YP_004283285.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
gi|338986620|ref|ZP_08633620.1| Acyl-CoA dehydrogenase domain-containing protein [Acidiphilium sp.
PM]
gi|146401549|gb|ABQ30076.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
gi|325050065|dbj|BAJ80403.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
gi|338206456|gb|EGO94592.1| Acyl-CoA dehydrogenase domain-containing protein [Acidiphilium sp.
PM]
Length = 408
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 37 PASK--FPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP 93
PA K F P D D LT +E+A+R E + ++ P + + + + F ++
Sbjct: 15 PAGKGSFTPFEWDDALHLDTQLTEDERAIRDAAHEYCQNKLFPRVLKGFREETFDRSIMS 74
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
++G + G T+ +GC S + E+ RVD+ + V SSL M I GSE
Sbjct: 75 EMGEMGFLGATLSTHGCADVSYVAYGLIAREVERVDSGYRSAFSVQSSLVMYPIYAFGSE 134
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
QK KYLP L + C+ LTEP GSD ++ T A KV+GG+IL G K WI NS AD
Sbjct: 135 AQKDKYLPKLRAGEWVGCFGLTEPDAGSDPGSMRTRAKKVDGGYILNGSKTWISNSPIAD 194
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V +++A++ I G+LV + + GL KIE K LR G I+L VFVP++ LPG
Sbjct: 195 VCLVWAKD-DEGVIRGFLVDRGSKGLETPKIEGKFSLRASVTGMIMLSDVFVPEDHMLPG 253
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
V + L +R +AW +G + + +Y +RK FG PLAA Q+ Q+KL M
Sbjct: 254 VKGLRGPFSCLNNARYGIAWGALGAAEFCWHAARQYTLDRKMFGRPLAATQLVQKKLADM 313
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
I + RL +L + G P SL K ++ + L R++ GGNGI+ ++
Sbjct: 314 QTEITLGLQGALRLGRLLDAGEAAPEMISLMKRNNCGKSLDIARLARDMHGGNGIVDEYH 373
Query: 394 VAK 396
V +
Sbjct: 374 VIR 376
>gi|295675629|ref|YP_003604153.1| acyl-CoA dehydrogenase [Burkholderia sp. CCGE1002]
gi|295435472|gb|ADG14642.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
Length = 396
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 192/349 (55%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++ P + E + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDAAAAYSQDKLLPRVLEAFRHEKTDLGIFREMGELGLLGPTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA+ I
Sbjct: 75 GPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSDAQKEKYLPKLARGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ + I
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDNI 194
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV+ + L +
Sbjct: 195 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDDVFVPEENIMPGVSGLRGPFTCLNSA 254
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 255 RYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 314
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 315 GRMKDEGTAATEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|68535259|ref|YP_249964.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
gi|68262858|emb|CAI36346.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
Length = 388
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 3/347 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI-PKLGALRVAGGTI 105
D F+ LL+ EE+ ++ + + K + P + E+++ P + P+ G L G +
Sbjct: 7 DLTSFNSLLSDEERMLQEAMADFANKSLKPNVQEWFDNGTLPAKELGPQFGQLGALGMHL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY CPG S +A EI VD+ +F+ V SLAM I GSEEQK+KYLP +A
Sbjct: 67 EGYECPGASAVAYGLACMEIEAVDSGLRSFVSVQGSLAMFAIHHWGSEEQKEKYLPKMAA 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ T AT+ W+L G K WI NS ADV V++AR T +
Sbjct: 127 GEYLGCFGLTEPDAGSDPASMKTRATRDGDEWVLNGTKMWITNSPVADVAVVWAR--TED 184
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
G++++K G T +I K+ LR G+I+L VPD RLP +++ + L
Sbjct: 185 GFAGFILEKGMEGFTTPEIHKKLSLRASITGEIVLDNCRVPDSQRLPKIDTLRGPLTCLN 244
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + + Y + R+ FG L+++Q+ Q KL M + +L+
Sbjct: 245 EARYGIIWGALGAARDSLETAIEYAQTREVFGKSLSSYQLTQAKLANMSVELNKSVLLAL 304
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+L +L +KG + P S+GK T A E R LLG +GI ++
Sbjct: 305 QLGRLKDKGELAPHQVSVGKLNSTGVALEIARECRTLLGASGITLEY 351
>gi|384440008|ref|YP_005654732.1| glutaryl-CoA dehydrogenase [Thermus sp. CCB_US3_UF1]
gi|359291141|gb|AEV16658.1| Glutaryl-CoA dehydrogenase [Thermus sp. CCB_US3_UF1]
Length = 385
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 188/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ V+ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ RVD+ +F+ V SSL M I GSE QK+++LP LA+
Sbjct: 63 PEYGGAGVSSAAYGLIAYELERVDSGLRSFVSVQSSLVMYPIYAYGSEAQKREFLPRLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L+G K WI N A + +I+A++
Sbjct: 123 GELVGCFGLTEPDGGSDPQGNMKTRARREGDTWVLQGSKMWITNGNLAHIAIIWAKDEE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V D PG ++++K+ LR +++L V VP+ RLP + L
Sbjct: 182 GRVLGFIVPTDTPGFQAREVKHKMSLRASVTSELILDGVRVPEALRLPKAEGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + K R FGAP+A Q+ Q KL +ML +L+
Sbjct: 242 TQARFGIAWGVLGALEAVYREAVEFAKSRSTFGAPIAQKQLVQAKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G +TP SL K +A E L RE+LGG+GI ++
Sbjct: 302 WRLARLKDEGRLTPAQVSLAKRQNVRKALEAARLAREILGGSGITLEY 349
>gi|414163532|ref|ZP_11419779.1| hypothetical protein HMPREF9697_01680 [Afipia felis ATCC 53690]
gi|410881312|gb|EKS29152.1| hypothetical protein HMPREF9697_01680 [Afipia felis ATCC 53690]
Length = 407
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 184/338 (54%), Gaps = 1/338 (0%)
Query: 62 VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIA 121
+R R+ + + P + E F V+ ++ L G TI GYGC G S +
Sbjct: 41 IRDTARDYAQSHLMPRILEANRDESFDRTVMKEMADLGFLGATIDGYGCAGISYVSYGLI 100
Query: 122 IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGS 181
+ E RVD S + + V ++L+M+ I GSE Q+QKYLP++A+ + C+ LTEP +GS
Sbjct: 101 MREFERVDTSFRSALGVQTTLSMVPIYAYGSEAQRQKYLPAMAKGEILGCFGLTEPDHGS 160
Query: 182 DASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTV 241
D + T A KV GG+ L G K WI ++ AD++V++A++ + I G+++++ GL+
Sbjct: 161 DPGGMKTRAKKVPGGYRLTGGKTWITHAPIADIMVVWAKD-DEDVIRGFVLERGMAGLST 219
Query: 242 TKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMG 301
KIENK +R G I ++ VFVP+E+ LPGV + L +R + W +G +
Sbjct: 220 AKIENKFSVRASPTGQIFMEDVFVPEENLLPGVQGLKGPFGCLNNARFGIIWGAMGAAEF 279
Query: 302 VYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361
+ +Y +RKQFG PLAA Q+ Q+KL M I +L + +L ++G TP
Sbjct: 280 CWHAARQYSMDRKQFGRPLAANQLIQKKLADMQTEISIGLLACLHVSRLRDEGKATPEML 339
Query: 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
SL K +A + R++ GGNGI ++ V + +M
Sbjct: 340 SLLKRNCAGKALDIARAARDIHGGNGISDEYHVIRHLM 377
>gi|416938174|ref|ZP_11934248.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
TJI49]
gi|325524811|gb|EGD02776.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
TJI49]
Length = 395
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + ++AP + E + + ++G L + G TI + YG
Sbjct: 14 LDQQLTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDAEIFREMGELGLLGPTIPEQYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M I GS+ QKQKYLP LA I
Sbjct: 74 GPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMGPIFEFGSDAQKQKYLPKLATGEWI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I
Sbjct: 134 GCFGLTEPNHGSDPGSMVTRAKKVAGGYSLSGAKMWITNSPIADVFVVWAKLEEDGKDTI 193
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVPDE+ +P V+ + L +
Sbjct: 194 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPDENLMPNVSGLRGPFTCLNSA 253
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 254 RYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 313
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|118467571|ref|YP_886806.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|399986819|ref|YP_006567168.1| acyl CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|118168858|gb|ABK69754.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|399231380|gb|AFP38873.1| Acyl CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
Length = 399
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 182/353 (51%), Gaps = 3/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP-KLGALRVAGG 103
A D + +L++EE+ +R VR +++ I P +A ++E E P + +LG L + G
Sbjct: 16 ADDLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGM 75
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+KGYGC G S +A E+ D+ + + V SLAM I GS+EQK ++LP +
Sbjct: 76 HLKGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDM 135
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + I C+ LTEP +GSD + + T AT+ WIL G K WI N + ADV V++AR T
Sbjct: 136 ASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWAR--T 193
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V D PG T I++K+ LR +++L V +PD RLPG S +
Sbjct: 194 DEGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRC 253
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + + +G + + Y R+QF P+ FQ+ QQKL M L+
Sbjct: 254 LNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLL 313
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + G + P SLGK A E R +LG +GI ++ V +
Sbjct: 314 ALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMR 366
>gi|239986706|ref|ZP_04707370.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
11379]
gi|291443648|ref|ZP_06583038.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
gi|291346595|gb|EFE73499.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
Length = 406
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 185/364 (50%), Gaps = 6/364 (1%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKL 95
SK PP A+D DDLL ++ A+R VR + P +AE++EK E P + +L
Sbjct: 10 SKLPPFDAADPLGIDDLLGPDDLAIRDTVRTWATDRVLPHIAEWYEKGELPGIRELAREL 69
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
GAL G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 70 GALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQ 129
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A I C+ LTEP +GSD + + T A + WIL G+K WI N + A V
Sbjct: 130 KQRWLPGMAAGEIIGCFGLTEPDHGSDPAGMRTYAKRDGEDWILTGRKMWITNGSVAGVA 189
Query: 216 VIFARNTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V++A+ I G++V DAPG + +I +K LR ++++ +V +P + LP
Sbjct: 190 VVWAQTDEGEDGRGIRGFVVPTDAPGFSAPEIHHKWSLRASVTSELVMDEVRLPADAVLP 249
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 250 DAKGLRGPLSCLSHARYGIVWGSMGAARASFESALDYARSREQFGRPIGGFQLTQAKLAD 309
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 310 MALELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICRTSRTILGANGISLEY 369
Query: 393 LVAK 396
V +
Sbjct: 370 PVMR 373
>gi|154251277|ref|YP_001412101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154155227|gb|ABS62444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
DS-1]
Length = 409
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 198/374 (52%), Gaps = 6/374 (1%)
Query: 31 AFPQATPASKFPPCASDYYQ----FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
A P + PP AS +Q D+ LT EE+ VR R E+++ + E
Sbjct: 7 ASPAKSGEKPNPPLASFNWQDPLLLDEQLTEEERMVRDSARAYCEEKLFTRVKEANRHEI 66
Query: 87 FPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAML 145
F ++ ++GA + G T+ + YGC G S +A E+ RVD+ + + V SSL M
Sbjct: 67 FHREIMNEMGAQGMLGLTLPEKYGCAGLSYVCYGLAAREVERVDSGYRSAMSVQSSLVMH 126
Query: 146 TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205
I G+E Q++KYLP LA + C+ LTEP +GSD ++ T A KV+GG++L G K W
Sbjct: 127 PIYAYGTEAQREKYLPKLATGEWVGCFGLTEPDHGSDPGSMRTRAAKVDGGYVLNGAKMW 186
Query: 206 IGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFV 265
I N+ +D+ V++A+ T + I G++V++ G KIE K LR G+I L+ VFV
Sbjct: 187 ITNAPISDLAVVWAK-TEDDVIRGFVVERGFKGFETPKIEGKFSLRASITGEISLQDVFV 245
Query: 266 PDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQI 325
PDE+ LP V L +R +AW +G + + +Y +RKQFG PLAA Q+
Sbjct: 246 PDENLLPNVRGLAGPFGCLNRARYGIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQL 305
Query: 326 NQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGG 385
Q+KL M I + +L ++++ G P SL K +A + + R++ GG
Sbjct: 306 IQKKLADMQTEITLGLQGCLQLGRMFDAGTAAPASISLMKRNNCGKALDIARVARDMHGG 365
Query: 386 NGILSDFLVAKVIM 399
NG+ ++ V + +M
Sbjct: 366 NGVSDEYHVIRHVM 379
>gi|365861448|ref|ZP_09401218.1| putative acyl-CoA dehydrogenase [Streptomyces sp. W007]
gi|364009047|gb|EHM30017.1| putative acyl-CoA dehydrogenase [Streptomyces sp. W007]
Length = 414
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 6/364 (1%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKL 95
SK PP ASD DDLL ++ A+R VR + P +A+++EK E P + +L
Sbjct: 18 SKLPPFDASDPLGIDDLLGRDDLAIRDTVRTWATDRVLPHIADWYEKGELPGIRELAREL 77
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
GAL G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 78 GALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQ 137
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A I C+ LTEP +GSD + + T A + W+L G+K WI N + A V
Sbjct: 138 KQRWLPGMASGEIIGCFGLTEPDHGSDPAGMRTYAKRDGEDWVLTGRKMWITNGSVAGVA 197
Query: 216 VIFARNTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V++A+ I G++V DAPG + +I +K LR ++++ +V +P + LP
Sbjct: 198 VVWAQTDEGEDGRGIRGFVVPTDAPGFSAPEIRHKWSLRASVTSELVMDEVRLPADAVLP 257
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 258 DASGLRGPLSCLSHARYGIVWGAMGAARASFESALDYARSREQFGRPIGGFQLTQAKLAD 317
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 318 MALELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICRTSRTILGANGISLEY 377
Query: 393 LVAK 396
V +
Sbjct: 378 PVMR 381
>gi|340708344|pdb|3SF6|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Mycobacterium Smegmatis
Length = 403
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 182/353 (51%), Gaps = 3/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP-KLGALRVAGG 103
A D + +L++EE+ +R VR +++ I P +A ++E E P + +LG L + G
Sbjct: 20 ADDLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGM 79
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+KGYGC G S +A E+ D+ + + V SLAM I GS+EQK ++LP +
Sbjct: 80 HLKGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDM 139
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + I C+ LTEP +GSD + + T AT+ WIL G K WI N + ADV V++AR T
Sbjct: 140 ASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWAR--T 197
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V D PG T I++K+ LR +++L V +PD RLPG S +
Sbjct: 198 DEGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRC 257
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + + +G + + Y R+QF P+ FQ+ QQKL M L+
Sbjct: 258 LNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLL 317
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + G + P SLGK A E R +LG +GI ++ V +
Sbjct: 318 ALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMR 370
>gi|404394190|ref|ZP_10985994.1| hypothetical protein HMPREF0989_02480 [Ralstonia sp. 5_2_56FAA]
gi|348614582|gb|EGY64126.1| hypothetical protein HMPREF0989_02480 [Ralstonia sp. 5_2_56FAA]
Length = 397
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 197/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTDDERMVRDAAASYCQDKLMPRVLESFRHEKTDASIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMITRAKKVDGGYSLSGAKMWITNSPIADVFVVWAKLPND 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K GLT I K+GLR G+I+L +VFVP+++ +PGV +
Sbjct: 190 NGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVFVPEDNLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|146275645|ref|YP_001165805.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
aromaticivorans DSM 12444]
gi|145322336|gb|ABP64279.1| acyl-CoA dehydrogenase domain protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 394
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 188/352 (53%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + LLT +E+ +R R + + P + + + + ++G + G T+
Sbjct: 11 DALGLEGLLTDDERMIRDAARAFAQDRLQPRVIDAFANEHTDPAIFREMGEQGLLGVTLP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + E+ RVD+ + + V SSL M I GSEEQ++KYLP LA
Sbjct: 71 EDYGCAGAGYVSYGLVAREVERVDSGYRSMMSVQSSLVMFPIYEYGSEEQRRKYLPRLAS 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD + TTA KV+GG++L G K WI N+ ADV VI+A++ +
Sbjct: 131 GEWIGCFGLTEPDAGSDPGGMRTTARKVDGGYVLSGSKTWISNAPIADVFVIWAKSDAHD 190
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ KIENK+ LR G +++ VFVPD+ LP V + L
Sbjct: 191 GGIRGFVLEKGMKGLSAPKIENKVSLRASITGMVVMDDVFVPDDALLPNVQGLKGPFGCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + + +Y +R QFG PLAA Q+ Q+KL M+ +I +
Sbjct: 251 NRARYGISWGSLGAAEFCFAAARQYGLDRHQFGRPLAATQLFQKKLADMMTDITLGLHAS 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++GA P S+ K +A + + R++ GGNGI ++ V +
Sbjct: 311 LRVGRLMDEGAFAPEMISIVKRNNVGKALDIARIARDMHGGNGISGEYQVIR 362
>gi|138520003|gb|AAI35459.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
Length = 440
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 193/375 (51%), Gaps = 3/375 (0%)
Query: 27 DISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
DI + + S+ D D LT +E +R R ++++ P + K
Sbjct: 34 DIQAQHEKKSSKSRVQFDYQDALSLDSQLTEDEIMIRDSFRAYCQEKLMPRILMANRKEV 93
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
F +I ++G L V G TIKGYGC G S + E+ RVD+S + + V SSL M
Sbjct: 94 FERDIISEMGELGVLGSTIKGYGCAGTSYVAYGLLAREVERVDSSYRSVMSVQSSLVMHP 153
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKR 204
IA+ GSEEQKQKYLP LA + C+ LTEP +GSD + + T A + L G K
Sbjct: 154 IAVYGSEEQKQKYLPRLASGEWLGCFGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKT 213
Query: 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
WI NS AD+ V++A ++ G+L+++ GL+ KIE K LR G ILL+ V
Sbjct: 214 WITNSPIADLCVVWA-ICEDGKVRGFLIERGTKGLSTPKIEGKFSLRASATGMILLEDVE 272
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
+P+E+ LP V+ L +R ++W +G + + +Y +R QFG PLA Q
Sbjct: 273 IPEENLLPNVSGLGGPFGCLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQ 332
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q+KL ML +I + RL +L ++ TP S+ K +A + R++LG
Sbjct: 333 LIQKKLADMLTDITIGLQACLRLGRLKDEEKATPEMISMLKRNSCGKALDIARQARDMLG 392
Query: 385 GNGILSDFLVAKVIM 399
GNGI ++ + + +M
Sbjct: 393 GNGISDEYHIIRHVM 407
>gi|312114593|ref|YP_004012189.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311219722|gb|ADP71090.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
vannielii ATCC 17100]
Length = 395
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 2/350 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
+D LT EE VR R + ++ P + E F V+ ++G+L G T+ + YG
Sbjct: 16 LEDALTEEETMVRDSARSYCQDQLLPRIREANRHEVFDCAVMTEMGSLGFLGSTLPEIYG 75
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
+ + E+ RVD+ + + V SSL M I G+EEQ++KYLP LA+ I
Sbjct: 76 GAAVNYVCYGLIAREVERVDSGYRSAMSVQSSLVMYPIYAYGTEEQRRKYLPKLARGEWI 135
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP GSD ++ T A K +GGW+L G K WI NS ADV V++A++ I G
Sbjct: 136 GCFGLTEPDAGSDPGSMKTRARKTDGGWLLSGSKIWITNSPVADVFVVWAKDDA-GIIKG 194
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ KIE K LR G+I+++ VFVPDE+RLP V + L +R
Sbjct: 195 FILEKGMKGLSAPKIEGKFSLRASITGEIVMESVFVPDENRLPNVEGLKGPFGCLNRARY 254
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+AW +G + + +Y +RKQFG PLA Q+ Q KL M I + RL +
Sbjct: 255 GIAWGVLGAAEFCFHASRQYTLDRKQFGRPLANTQLVQLKLANMETEIALGLHACLRLGR 314
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L+++ M P S+ K +A + + R++ GGNGI +F V + M
Sbjct: 315 LFDEQKMAPEMISMLKRNNCGKALDIARIARDMHGGNGISDEFHVIRHAM 364
>gi|441515682|ref|ZP_20997476.1| glutaryl-CoA dehydrogenase [Gordonia amicalis NBRC 100051]
gi|441449522|dbj|GAC55437.1| glutaryl-CoA dehydrogenase [Gordonia amicalis NBRC 100051]
Length = 390
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 189/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL ++E A+R VR+ + + P +A+++E A+ P I K LG +
Sbjct: 4 PSTLTQLFALDSLLDADEIAIRDTVRDFADARLRPHIADWFEDAKLPAREIAKELGQIGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLEGYGCPGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A + I C+ LTEP +GS+ S + T A + G W+L G K WI N + ADV V++A+
Sbjct: 124 PRMAAGDAIGCFGLTEPDFGSNPSGMRTNAKRDGGDWLLNGTKMWITNGSIADVAVVWAQ 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T I G++V D PG + +I K+ LR +++L V +P+ LP +
Sbjct: 184 --TDEGIRGFVVPTDTPGFSAPEIHKKMSLRASVTSELVLDNVRLPESAVLPKAQGLRGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + IG + + Y + R+ F PLA +Q+ Q K+ M +
Sbjct: 242 LTSLGEARFGIIFGAIGAARDCLETAIDYARSREVFDKPLAGYQLTQAKIADMALEVGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G +TP S GK RE + + RE +LG NGI ++ V +
Sbjct: 302 HLLAYHLGRLKDRGEITPEQVSTGK---LNNTREAIKIARECRTILGANGITLEYPVIR 357
>gi|86360546|ref|YP_472434.1| glutaryl-CoA dehydrogenase [Rhizobium etli CFN 42]
gi|86284648|gb|ABC93707.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
Length = 395
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 192/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT+EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTNEERMVQDTAHAYAQQKLAPRVLDAFRNEKTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GS QKQKYLP LA
Sbjct: 71 SPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIETFGSAAQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y+ ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYVLERKQFGRPLAANQLIQKKLADMAAEIALGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEMARAARDMLGGNGISDEFGIAR 361
>gi|424884617|ref|ZP_18308232.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393178316|gb|EJC78356.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 395
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 191/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++AP + + + + + ++GAL + G TI
Sbjct: 11 ADPFRLAEQLTDEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGALGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSEEQK KYLP LA
Sbjct: 71 SPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIETFGSEEQKLKYLPRLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A +V+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 SGEWIGCFGLTEPDHGSDPGSMATRAKRVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDSVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQRKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A + R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALDIARASRDMLGGNGISDEFGIAR 361
>gi|429199134|ref|ZP_19190909.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
ipomoeae 91-03]
gi|428665164|gb|EKX64412.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
ipomoeae 91-03]
Length = 394
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 179/346 (51%), Gaps = 3/346 (0%)
Query: 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCP 111
+ L T+EE A R KVR + IAP +E F ++ +LG L V G + G+GC
Sbjct: 18 EHLFTAEETAWRDKVRAFSRERIAPTADADFEDRHFRRELVRELGGLGVLGMHLDGHGCA 77
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G +A E+ VD++ TF+ V SLAM I+ G+EEQK ++LP +A I C
Sbjct: 78 GAGAVSYGLACLELEAVDSAWRTFVSVQGSLAMSAISKWGTEEQKTRWLPEMAAGRAIGC 137
Query: 172 WALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 230
+ALTEP GSD ++ TTA + GG W+L+G KRWIG + ADV V++A T + + G+
Sbjct: 138 FALTEPDGGSDPKSMRTTARRDGGGDWVLDGAKRWIGLGSVADVAVVWA--NTEDGVRGF 195
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
LV PG T T+I NK+ LR D+ +P + LPG + L +R
Sbjct: 196 LVPAGTPGFTATEITNKLSLRASIQCDLRFDDCRLPADAVLPGATGLRGPFSCLNEARYG 255
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
+ W +G + +ER+ FG LA Q+ QQK+ M Q +L+ + +L
Sbjct: 256 IIWGVMGAARECLSAAVERSRERRVFGKALAELQLTQQKVADMAVEYQKGLLLAVHIGRL 315
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
E GA+ P S+GK A R +LGG+G+ SDF V +
Sbjct: 316 KEAGALAPAQISVGKLNNVREALTIARTARTILGGDGVTSDFPVMR 361
>gi|407695174|ref|YP_006819962.1| acyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
gi|407252512|gb|AFT69619.1| Acyl-CoA dehydrogenase domain protein [Alcanivorax dieselolei B5]
Length = 394
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + + ++ P + + + ++G L + G TI + YG
Sbjct: 15 LDQQLTEDERMVRDTAYQYSQGKLMPRVLNAFRNEHTDVEIFREMGELGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I GSEEQKQKYLP LA I
Sbjct: 75 GAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEEQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A K +GG++L G K WI NS ADV V++A+ T ++I G
Sbjct: 135 GCFGLTEPDHGSDPGSMVTRAKKTDGGYLLSGAKMWITNSPIADVFVVWAK-TEDDKIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ +PGV+ + L +R
Sbjct: 194 FILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENLMPGVSGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GIAWGALGAAEFCWHTSRQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R+++GGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMMGGNGISDEFGVAR 360
>gi|451335235|ref|ZP_21905804.1| Glutaryl-CoA dehydrogenase [Amycolatopsis azurea DSM 43854]
gi|449422367|gb|EMD27748.1| Glutaryl-CoA dehydrogenase [Amycolatopsis azurea DSM 43854]
Length = 390
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 184/355 (51%), Gaps = 3/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVA 101
P D+ D L+ E++A+R VR ++ P +AE++E P + K G L +
Sbjct: 5 PDPRDFLDLDAELSDEDRAIRDAVRSYAHDQLLPNIAEWYETGALPAAELAKGFGQLGLL 64
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G ++G+GC G S IA E+ VD+ +F+ V SLAM I G+EEQK+++LP
Sbjct: 65 GMHLEGHGCAGTSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHKWGTEEQKREWLP 124
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+A + C+ LTEP GSD ++ T A + W+L G K WI N T ADV V++A+
Sbjct: 125 RMAAGEALGCFGLTEPDAGSDPGSMRTRARRDGSDWVLNGSKMWITNGTVADVAVVWAQ- 183
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T + + G++V D PG T ++++K+ LR +++L V +P+ P V +
Sbjct: 184 -TDDGVRGFVVPTDTPGFTANEVKHKLSLRASLTAELVLDGVRLPESAAFPEVRGLRGPL 242
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + +G + Y+ Y R+QFG PLA FQ+ Q+KL ++ +
Sbjct: 243 SCLNEARYGILFGVVGAARSCYESALEYTLSREQFGKPLAGFQLTQRKLADLVVEVNRAG 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
LV R+ +L + G + H S GK A E R +LG NGI ++ V +
Sbjct: 303 LVALRIGRLKDAGTLHHNHVSFGKLANVRSALEVARTARAMLGANGISLEYPVMR 357
>gi|167586291|ref|ZP_02378679.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
Length = 395
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR R + ++AP + + + + ++G L + G TI
Sbjct: 9 DDPLLLDQQLTEDERMVRDAARAYAQDKLAPRVTDAFRHERTDVGIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QK++YLP LA
Sbjct: 69 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPICEFGSDVQKEQYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMITRAKKVPGGYSLSGSKMWITNSPIADVFVVWAKLEED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L VFVP+E+RLP V +
Sbjct: 189 GRDTIRGFILEKGWKGLSAPVIHGKVGLRASITGEIVLDDVFVPEENRLPHVGGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFCVAR 362
>gi|224006279|ref|XP_002292100.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
pseudonana CCMP1335]
gi|220972619|gb|EED90951.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
pseudonana CCMP1335]
Length = 470
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 189/354 (53%), Gaps = 6/354 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D QF DLLT EE A++ ++E+ P I+ + F + + K+G + + G TI
Sbjct: 79 DALQFKDLLTDEEIAIQEAANSFCQQELQPQILLANRNEVHFNHNDMRKMGEMGLLGPTI 138
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YGC G + E+ RVD+S + + V SSL M I GSEE K+KYLP LA
Sbjct: 139 PEYYGCAGLGYVSYGLIATEVERVDSSYRSAMSVQSSLVMHPIYAFGSEEMKKKYLPELA 198
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNT 222
Q + + C+ LTEP +GSD S++ T + G +IL G K WI NS AD+ +++ARN
Sbjct: 199 QGHFVGCFGLTEPNHGSDPSSMETRSRYDAGTNEFILNGSKNWITNSPIADIFIVWARN- 257
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I GYL++K PGL KIE K LR G I L+ V VP + L V +
Sbjct: 258 EEGKIKGYLIEKGTPGLDAPKIEGKGSLRASATGMIFLEDVRVPAANEL-NVTGLKGPFS 316
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + Y+ ERKQFGAPL A Q+ Q+KL M+ I L
Sbjct: 317 CLNNARFGIAWGALGAAEDCFHRAREYVMERKQFGAPLGANQLIQKKLADMMTEISLARL 376
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ + EK A +P SL K ++ + + R++LGGNGI ++ + +
Sbjct: 377 GCLQVGRQMEKQAASPSMVSLIKRNSCGKSLDIARMARDMLGGNGISDEYHIIR 430
>gi|405382720|ref|ZP_11036499.1| acyl-CoA dehydrogenase [Rhizobium sp. CF142]
gi|397320942|gb|EJJ25371.1| acyl-CoA dehydrogenase [Rhizobium sp. CF142]
Length = 395
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 192/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++ P + E + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTDEERMVQETAHAYAQEKLGPRVLEAFRHEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ RVD+ + + V SSL M+ I GSEEQK+KYLP LA
Sbjct: 71 DPEYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDAFGSEEQKKKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPNHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ KI+ K+GLR G++++ VFVP+E+ LP V+ + L
Sbjct: 190 GLIRGFILEKGWKGLSAPKIQGKVGLRASITGEVVMDNVFVPEENLLPDVSGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEACYATARQYTLDRQQFGRPLAANQLIQKKLADMATEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F VA+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGVAR 361
>gi|218673125|ref|ZP_03522794.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56]
Length = 395
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 191/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT+EE+ V+ ++++AP + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTNEERMVQDTAHAYAQQKLAPRVLNAFRHEKTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 71 SPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIETFGSEAQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 SGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEMVMDAVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A + R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALDIARASRDMLGGNGISDEFGIAR 361
>gi|441162150|ref|ZP_20968034.1| acyl-CoA dehydrogenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616652|gb|ELQ79784.1| acyl-CoA dehydrogenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 398
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 186/365 (50%), Gaps = 5/365 (1%)
Query: 35 ATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHV 91
A P+ + PP +D DDLL+ E++AVR VR + P +AE++E+ E P +
Sbjct: 3 APPSPQLPPFDPADPLGIDDLLSDEDRAVRTTVRRWAGDRVLPHIAEWYERGELPGIRDL 62
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+LG+L G + GYGC G S +A E+ D+ + + V SLAM I G
Sbjct: 63 ARELGSLGALGMALTGYGCAGASHVQYGLACLELEAADSGIRSLVSVQGSLAMYAIWRFG 122
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTF 211
SEEQKQ++LP +A I C+ LTEP +GSD + T A + W+L G+K WI N +
Sbjct: 123 SEEQKQRWLPDMASGEIIGCFGLTEPDHGSDPGNMRTHAKRDGTDWVLTGRKMWITNGSV 182
Query: 212 ADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
A V++A+ T + I G+LV PG + +I +K LR +++L +V +P + L
Sbjct: 183 AGAAVVWAQ--TDDGIRGFLVPAGTPGFSAPEITHKWSLRASVTSELVLDEVRLPADAVL 240
Query: 272 PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLV 331
PG + L +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 241 PGAKGLGGPLRCLGHARYGIVWGSMGAARASFEAALDYSRTREQFGRPIGGFQLTQAKLA 300
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
M + +L+ L + ++ G + P S GK A E R +LG NGI +
Sbjct: 301 DMAVELHKGLLLAHHLGRRFDAGRLRPEQISFGKLNNVREAIEICRTARTILGANGISLE 360
Query: 392 FLVAK 396
+ V +
Sbjct: 361 YPVMR 365
>gi|320450888|ref|YP_004202984.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
gi|320151057|gb|ADW22435.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
Length = 399
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 190/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ ++ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 17 DFYALEDLLTPEEKEIQKAARRFLEKEALPYIRDWWEEGVFPTHLIPRFAELGFLGPTLP 76
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 77 PEYGGAGVSSAAYGLIAYELERVDSGLRSFVSVQSSLVMYPIYAFGSEEQKREFLPKLAR 136
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T ++EG W+L G K WI N A + +I+A++
Sbjct: 137 GEMVGCFGLTEPDGGSDPYGNMKTKARLEGDTWVLNGTKMWITNGNLAHIAIIWAKDEE- 195
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V D PG ++++K+ LR +++L++V VP+ RLP + L
Sbjct: 196 GRVLGFIVPTDTPGFQAREVKHKMSLRASVTSELVLEEVRVPEALRLPKAEGLKAPLSCL 255
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + K R FG P+A Q+ Q KL +ML + +L+
Sbjct: 256 TQARFGIAWGVLGALEAVYTEAVEFAKSRSTFGEPIAKKQLVQAKLAEMLADHTEGLLLA 315
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G + P SL K +A + L R++LGG+GI ++
Sbjct: 316 WRLARLKDEGKLKPAQVSLAKRQNVWKALKAARLARDILGGSGITLEY 363
>gi|186477187|ref|YP_001858657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
phymatum STM815]
gi|184193646|gb|ACC71611.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
STM815]
Length = 396
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 190/345 (55%), Gaps = 3/345 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT EE+ VR + ++AP + E + + + ++G L + G TI + YG PG
Sbjct: 19 LTEEERMVRDAAEAYAQDKLAPRVLEAFRNEKTDIAIFREMGELGLLGPTIPEQYGGPGL 78
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ RVD+ + + V SSL M+ I GS+ QK KYLP LA I C+
Sbjct: 79 NYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKDKYLPKLASGEWIGCFG 138
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT--TNQINGYL 231
LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ T ++I G++
Sbjct: 139 LTEPNHGSDPGSMVTRAKKVDGGYSLSGAKMWITNSPIADVFVVWAQLETDGKDEIRGFI 198
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV + L +R +
Sbjct: 199 LEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPGVKGLRGPFTCLNSARYGI 258
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 259 AWGALGAAESCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMK 318
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 319 DEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 363
>gi|384430979|ref|YP_005640339.1| glutaryl-CoA dehydrogenase [Thermus thermophilus SG0.5JP17-16]
gi|333966447|gb|AEG33212.1| Glutaryl-CoA dehydrogenase [Thermus thermophilus SG0.5JP17-16]
Length = 385
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ ++ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEIQKAARRFLEKEALPYIRDWWEEGVFPVHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVTSAAYGLIAYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L G K WI N A + VI+A++
Sbjct: 123 GEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+LV D PG +++ K+ LR +++L++V VP+ RLP + L
Sbjct: 182 GEVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ + K R FG PLA Q+ Q KL +ML +L+
Sbjct: 242 TQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G +TP SL K +A + + RE+LGG+GI ++
Sbjct: 302 WRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMAREILGGSGITLEY 349
>gi|319762133|ref|YP_004126070.1| acyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|317116694|gb|ADU99182.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
denitrificans BC]
Length = 398
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 188/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+A+R R + ++AP + + + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLTEDERAIRDAARAYCQDKLAPRVLDMFRHEKTDVGIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I GSE QKQKYLP LA
Sbjct: 69 PTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGSEAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-- 222
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVEP 188
Query: 223 --TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
QI G+++ K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 189 SGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEIRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEIALG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K +A + L R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|424903072|ref|ZP_18326585.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis
MSMB43]
gi|390930945|gb|EIP88346.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis
MSMB43]
Length = 384
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++AP + + + + ++G + + G TI + YG
Sbjct: 3 LDQQLTDDERMVRDAANAYAQGKLAPRVTQAFRHETTDAAIFREMGEVGLLGPTIPEQYG 62
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA I
Sbjct: 63 GPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWI 122
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ ++I
Sbjct: 123 GCFGLTEPNHGSDPGSMVTRAQKVPGGYSLSGSKMWITNSPIADVFVVWAKLDEDGRDEI 182
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVPDE+ LPGV + L +
Sbjct: 183 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPDENILPGVKGLRGPFTCLNSA 242
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 243 RYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 302
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 303 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 351
>gi|167837676|ref|ZP_02464559.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis
MSMB43]
Length = 395
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 192/354 (54%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + + + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAANAYAQGKLAPRVTQAFRHETTDAAIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAQKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L +VFVPDE+ LPGV +
Sbjct: 189 GRDEIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPDENILPGVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|206561535|ref|YP_002232300.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
J2315]
gi|421867465|ref|ZP_16299124.1| Glutaryl-CoA dehydrogenase [Burkholderia cenocepacia H111]
gi|444359673|ref|ZP_21160969.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
cenocepacia BC7]
gi|444373302|ref|ZP_21172675.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198037577|emb|CAR53514.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
J2315]
gi|358072879|emb|CCE50002.1| Glutaryl-CoA dehydrogenase [Burkholderia cenocepacia H111]
gi|443591916|gb|ELT60765.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443601450|gb|ELT69590.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
cenocepacia BC7]
Length = 395
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 191/353 (54%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT EE+ VR + + ++AP + E + + ++G + + G TI
Sbjct: 10 DPLLLDQQLTEEERMVRDAAQAYAQDKLAPRVTEAFRHERTDAAIFREMGEVGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 70 EEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTT 223
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 130 GEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEENG 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++++K GL+ I K+GLR G+I+L +VFVPDE+ +P V+ +
Sbjct: 190 KDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPDENLMPNVSGLRGPFTC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 250 LNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQG 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 310 VLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|429199931|ref|ZP_19191665.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
ipomoeae 91-03]
gi|428664392|gb|EKX63681.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
ipomoeae 91-03]
Length = 389
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 182/352 (51%), Gaps = 3/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-HVIPKLGALRVAGGT 104
+D + D L E+ +R V ++ ++ +AE++E FP + P+LG L + G
Sbjct: 7 TDALELDGELDDVERLIRDTVSAFVKDKVTDRVAEWFETGTFPTSELAPELGQLGLLGMH 66
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S T +A E+ D+ +F+ V SL M I GSEEQKQ++LP LA
Sbjct: 67 LEGYGCAGASATAYGVACRELEAADSGLRSFVSVQGSLVMFPIHRYGSEEQKQQWLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD + T A + W+L G K WI N + AD+ +++AR T
Sbjct: 127 SGEAIGCFGLTEPDQGSDPGGMRTVAKRDGDDWVLNGTKMWITNGSIADIAIVWAR--TE 184
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G+LV K PG T ++I K+ LR ++ L+ V +P + LPGV + L
Sbjct: 185 EGIRGFLVPKGTPGFTTSEIHRKLSLRASVTAELHLEDVRLPGDAVLPGVTGLRGPLSCL 244
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+ +R + +G + Y Y R+QFG P+ FQ+ Q+KL M ++ L+
Sbjct: 245 SEARFGILCGVVGAARTCYLSALEYSTTREQFGRPIGGFQLTQEKLAHMQVDLVRSQLLA 304
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + G + P SLGK A + R +LG NGI +++ V +
Sbjct: 305 LRLSRLKDTGKLRPEQVSLGKLANVRAALDIARSARTVLGANGITTEYPVLR 356
>gi|407009021|gb|EKE24254.1| hypothetical protein ACD_6C00182G0002 [uncultured bacterium]
Length = 399
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 190/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LTSEE+ +R + ++ P + E + + + ++G L + G TI
Sbjct: 11 DPFLIEQQLTSEERMIRDAAAAYCQDKLMPRVLEQFRHEKTDPAIFREMGELGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 71 EQYGGAGLNYVSYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ + A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 131 GEYIGCFGLTEPDHGSDPGSMISRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 190
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 191 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLKGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R+++GGNGI +F VA+
Sbjct: 311 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|443242816|ref|YP_007376041.1| acyl-CoA dehydrogenase-like protein [Nonlabens dokdonensis DSW-6]
gi|442800215|gb|AGC76020.1| acyl-CoA dehydrogenase-like protein [Nonlabens dokdonensis DSW-6]
Length = 394
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 188/358 (52%), Gaps = 4/358 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R ++++++PI+ E ++A+FP +IP L ++ G
Sbjct: 8 APDYYNIDDLLTEEHKMIRDAARSWVKRDVSPIIEEAAQEAKFPKSIIPGLASIGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I GSEEQKQK+LP L
Sbjct: 68 IPEEYGGSGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGSEEQKQKFLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGW--ILEGQKRWIGNSTFADVLVIFARN 221
A + + LTEP +GS+ + T G IL G K WI NS F DV V++A+N
Sbjct: 128 ASGEFMGSFGLTEPDHGSNPGGMITNYKDAGDGENVILNGAKLWISNSPFCDVAVVWAKN 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+I+G +V++ G + + NK LR G+++ + V VP + LP +
Sbjct: 188 EE-GRIHGVIVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKSNILPNKSGLGAPL 246
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW IG +M YD RY K+R QFG P+AAFQ+ Q+KL +M+ I
Sbjct: 247 GCLDSARFGIAWGAIGAAMDCYDTALRYAKQRIQFGKPIAAFQLQQKKLAEMITEITKAQ 306
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L+ RL +L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 LLALRLGQLKNEDRATSAQISMAKRNNVEMAIKIAREARQILGGMGITGEYSIMRHMM 364
>gi|209546212|ref|YP_002278102.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539069|gb|ACI59002.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 395
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLAEQLTDEERMVQNTAHAYAQEKLAPRVLDAFRNEKTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|260578533|ref|ZP_05846444.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
gi|258603317|gb|EEW16583.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
Length = 388
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 3/347 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI-PKLGALRVAGGTI 105
D F+ LL+ EE+ ++ + + K + P + E+++ P + P+ G L G +
Sbjct: 7 DLTSFNSLLSDEERMLQEAMADFANKSLKPNVQEWFDNGTLPAKELGPQFGQLGALGMHL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GY CPG S +A EI VD+ +F+ V SLAM I GSEEQK+KYLP +A
Sbjct: 67 EGYECPGASAVAYGLACMEIEAVDSGLRSFVSVQGSLAMFAIHHWGSEEQKEKYLPKMAA 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ T AT+ W+L G K WI NS ADV V++AR T +
Sbjct: 127 GEYLGCFGLTEPDAGSDPASMKTRATRDGDEWVLNGTKMWITNSPVADVAVVWAR--TED 184
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
G++++K G T +I K+ LR G+I+L VPD RLP +++ + L
Sbjct: 185 GFAGFILEKGMEGFTAPEIHKKLSLRASITGEIVLDNCRVPDSQRLPKIDTLRGPLTCLN 244
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + + Y + R+ FG L+++Q+ Q KL M + +L+
Sbjct: 245 EARYGIIWGALGAARDSLETAIDYTETREVFGKSLSSYQLTQAKLANMSVELNKSVLLAL 304
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+L +L +KG + P S+GK T A E R LLG +GI ++
Sbjct: 305 QLGRLKDKGELAPHQVSVGKLNSTRVALEIARECRTLLGASGITLEY 351
>gi|392578398|gb|EIW71526.1| hypothetical protein TREMEDRAFT_60452 [Tremella mesenterica DSM
1558]
Length = 382
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 181/346 (52%), Gaps = 3/346 (0%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGH 113
LLT EE AVR R + +++P + E + F ++ ++G + + G TIKGY C G
Sbjct: 4 LLTDEELAVRETARSYCQSKLSPRIVEAYRTENFDPSILKEMGEMGLLGATIKGYDCAGV 63
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S + E+ RVD+ + + V SSL M I GSE QK+KYLP LA+ I C+
Sbjct: 64 SSVAYGLIAREVERVDSGYRSAMSVQSSLVMHPINEFGSEAQKEKYLPRLAKGEMIGCFG 123
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ---INGY 230
LTEP +GSD S++ TTA K GW+L G K WI N+ AD+ VI+AR + + + G+
Sbjct: 124 LTEPNHGSDPSSMETTAKKTSDGWVLNGSKTWISNAPVADLFVIWARVVESGEKGKVRGF 183
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
LV+K PGL+ I+NKI LR G + L+ V +P + LP + L +R
Sbjct: 184 LVEKGLPGLSAPAIKNKIALRASITGSVFLEDVRIPADALLPKSSGLGSAFSCLNNARYG 243
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
++W +G Y ERKQF PLA+FQ+ Q+KL + +L +L +L
Sbjct: 244 ISWGVMGALEDCIARARDYALERKQFDKPLASFQLVQKKLADASTSSTLGLLASLQLGRL 303
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G P S+ K A + + ++LGGN ++ V +
Sbjct: 304 KDQGTWAPDMVSMMKRNNCGEALKHARILLDILGGNACSDEYHVGR 349
>gi|389721274|ref|ZP_10188027.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. HA]
gi|388608855|gb|EIM38050.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. HA]
Length = 399
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 190/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LTSEE+ +R + ++ P + E + + + ++G L + G TI
Sbjct: 11 DPFLIEQQLTSEERMIRDAAAAYCQDKLMPRVLEQFRHEQTDQTIFREMGELGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 71 EQYGGAGLNYVSYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 131 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 190
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 191 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLRGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R+++GGNGI +F VA+
Sbjct: 311 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|313675289|ref|YP_004053285.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
tractuosa DSM 4126]
gi|312941987|gb|ADR21177.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
tractuosa DSM 4126]
Length = 395
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 182/349 (52%), Gaps = 2/349 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D+Y D LLT E + +R VR+ ++KEI+P + E+ + A FP+ ++ K G + G T
Sbjct: 11 SPDFYALDGLLTEEHKLIRQSVRDFVKKEISPNIEEWAQNAHFPYEIVKKFGDVGAFGPT 70
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SL M I G+E Q++KYLP L
Sbjct: 71 IPQEYGGGGLDYISYGLIMQEIERGDSGMRSTASVQGSLVMYPIYAFGNEAQRKKYLPKL 130
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ S + T ++L G K WI NS DV V++A+N
Sbjct: 131 ASGEWLGSFGLTEPDHGSNPSGMTTNFKDKGDHYLLNGAKMWISNSPKCDVAVVWAKNEE 190
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + K LR G+++ V VP E+ L G + K
Sbjct: 191 -GRIHGLIVERGMEGFTTPETHGKWSLRASTTGELVFDNVKVPKENLLEGKSGLGAPMKC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY ER QFG P+A+FQ+ Q+KL +ML I L+
Sbjct: 250 LDSARFGIAWGAIGAAMDCYDSARRYSLERIQFGKPIASFQLTQKKLSEMLTEITKSQLL 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+RL +L ++G + S+ K A R++ GG GI D+
Sbjct: 310 NYRLAQLMDEGKASTPQISMAKRNAVEIALNIAREARQIHGGMGITGDY 358
>gi|427792635|gb|JAA61769.1| Putative glutaryl-coa dehydrogenase, partial [Rhipicephalus
pulchellus]
Length = 412
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 183/340 (53%), Gaps = 2/340 (0%)
Query: 62 VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIA 121
VR VR+ + + P + F ++ +LG L V G T++GYGC G S +
Sbjct: 41 VRDTVRDYCQTRLQPRVLLANRHETFDRDIVHELGELGVLGSTLQGYGCAGTSYVAYGLT 100
Query: 122 IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGS 181
E+ RVD+ + + V SSL ML I L G+EEQKQ+YLP LA+ + C+ LTEP +GS
Sbjct: 101 AREVERVDSGYRSTMSVQSSLVMLPIYLFGTEEQKQRYLPRLAKGELLGCFGLTEPNHGS 160
Query: 182 DASALNTTATK--VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGL 239
+ L T A + + L G K WI NS ADV V++A+ I ++++K PGL
Sbjct: 161 NPGGLETRARHDPLARTYTLNGSKTWITNSPEADVFVVWAKCEEDGIIRAFVLEKGTPGL 220
Query: 240 TVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299
T +IE K LR G I+++ V VP++ LP + T + L +R ++W +G +
Sbjct: 221 TAPRIEGKFSLRASATGMIIMEDVTVPEDALLPASRGLKSTFQCLTSARYGISWGALGAA 280
Query: 300 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPG 359
+ +Y +R QFG PLA+ Q+ Q+KL M+ I + R+ +L+++G++ P
Sbjct: 281 EFCLETARQYTLDRHQFGRPLASNQLVQKKLADMVTEISLGLQACLRVGRLFDQGSLCPE 340
Query: 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
SL K +A + R++LGGNGI ++ V + +M
Sbjct: 341 MVSLVKRNSCGKALDIARTARDMLGGNGISDEYHVIRHVM 380
>gi|449542216|gb|EMD33196.1| hypothetical protein CERSUDRAFT_87519 [Ceriporiopsis subvermispora
B]
Length = 399
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 195/369 (52%), Gaps = 8/369 (2%)
Query: 33 PQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
P+ ++KF D D+LLT +E+A+R ++++ P + E F ++
Sbjct: 4 PKGASSAKFD--WEDPLSLDNLLTEDERAIRDSAHAFCQEQLVPRVLEAQRTEAFNNDLL 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
P +GAL G TI+GYGC G S + E+ RVD+ + V SSL M I G+
Sbjct: 62 PSMGALGFLGPTIEGYGCAGVSSVAYGLIAREVERVDSGYRSTFSVQSSLVMHPINEYGT 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
+ QK KYLP LA+ I C+ LTEP +GSD +++ TTA +V+GG++L G K WI ++ A
Sbjct: 122 QAQKDKYLPRLAKGEIIGCFGLTEPNHGSDPASMETTAEEVDGGFVLNGAKTWISSAPVA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
D+ VI+A ++ G+L++K GL+ T I+NK+ LR G I + V + LP
Sbjct: 182 DLFVIWAICKWDGKVRGFLLEKGTKGLSTTTIKNKLALRCSLTGSIFMDNVRAGHDALLP 241
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHR---YLKERKQFGAPLAAFQINQQK 329
GV+ + L +R ++W +G + D HR Y R+QFG PLA+FQ+ Q+K
Sbjct: 242 GVSGLKGPFGCLNNARYGISWGTMG---ALEDCVHRAREYALARRQFGRPLASFQLVQKK 298
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
LV + +L ++ +L ++G P SL K +A E ++LGGN
Sbjct: 299 LVDAQTEVTLGLLASLQVGRLKDEGKAAPAMISLVKRNNCGKALEHARKVLDILGGNACS 358
Query: 390 SDFLVAKVI 398
++ V + +
Sbjct: 359 DEYHVGRHV 367
>gi|393778076|ref|ZP_10366359.1| dehydrogenase [Ralstonia sp. PBA]
gi|392714962|gb|EIZ02553.1| dehydrogenase [Ralstonia sp. PBA]
Length = 397
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 191/355 (53%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD D LT +E+ VR + ++AP + E + + ++G L + G TI
Sbjct: 10 SDPLLLDQQLTEDERMVRDAAAAYCQDKLAPRVLESFRHERTDVAIFREMGELGLLGPTI 69
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG P + + E+ R+D+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PSQYGGPELNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A +V+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 SGEWIGCFGLTEPDHGSDPGSMVTRAKRVQGGFSLSGAKMWITNSPIADVFVVWAKLMDD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV +
Sbjct: 190 DGTDAIRGFILEKGWKGLSAPAIHGKVGLRTSVTGEIVLDQVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI ++ V +
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEYGVIR 364
>gi|62858803|ref|NP_001016289.1| glutaryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
gi|89266838|emb|CAJ83975.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
gi|89268079|emb|CAJ82579.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
Length = 440
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 192/375 (51%), Gaps = 3/375 (0%)
Query: 27 DISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
DI + + S+ D D LT +E +R R ++++ P + K
Sbjct: 34 DIQAQHEKKSSKSRVQFDYQDALSLDSQLTEDEIMIRDSFRAYCQEKLMPRILMANRKEV 93
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
F +I ++G L V G TIKGYGC G S + E+ RVD+S + + V SSL M
Sbjct: 94 FERDIISEMGELGVLGSTIKGYGCAGTSYVAYGLLAREVERVDSSYRSVMSVQSSLVMHP 153
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKR 204
IA GSEEQKQKYLP LA + C+ LTEP +GSD + + T A + L G K
Sbjct: 154 IAAYGSEEQKQKYLPRLASGEWLGCFGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKT 213
Query: 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
WI NS AD+ V++A ++ G+L+++ GL+ KIE K LR G ILL+ V
Sbjct: 214 WITNSPIADLCVVWA-ICEDGKVRGFLIERGTKGLSTPKIEGKFSLRASATGMILLEDVE 272
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
+P+E+ LP V+ L +R ++W +G + + +Y +R QFG PLA Q
Sbjct: 273 IPEENLLPNVSGLGGPFGCLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQ 332
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q+KL ML +I + RL +L ++ TP S+ K +A + R++LG
Sbjct: 333 LIQKKLADMLTDITIGLQACLRLGRLKDEEKATPEMISMLKRNSCGKALDIARQARDMLG 392
Query: 385 GNGILSDFLVAKVIM 399
GNGI ++ + + +M
Sbjct: 393 GNGISDEYHIIRHVM 407
>gi|328770903|gb|EGF80944.1| hypothetical protein BATDEDRAFT_24489 [Batrachochytrium
dendrobatidis JAM81]
Length = 406
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 188/356 (52%), Gaps = 4/356 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + + LLT EE+ VR R+ + ++ P + + + +F ++ ++G L + G TI
Sbjct: 19 DPFNLESLLTEEEKLVRDTARQYCQSKLQPRIIDAYRNEDFAREIMSEMGELGLLGATID 78
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD+ + + V SSL M I G+E+Q++KYLP LA
Sbjct: 79 GYGCSGVSSVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIYAYGTEKQREKYLPDLATG 138
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I + LTEP +GSD + T ATK+ G ++L G K WI NS ADV V++A+ T N+
Sbjct: 139 KKIGAFGLTEPNHGSDPGGMETRATKLGGTYVLNGSKTWISNSPIADVFVVWAK-TDDNE 197
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP---GVNSFQDTSKV 283
I G+++++ PGL I+ K+ LR G I++ V +P + LP G+ +
Sbjct: 198 IRGFILERGMPGLETPTIKGKLSLRASCTGMIMMDDVEIPVSNMLPLVKGLKACTGPFGC 257
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + Y+ RKQFG PLA FQ+ Q+KL + I +
Sbjct: 258 LNNARFGIAWGALGAAESCVESAREYVLNRKQFGVPLARFQLIQKKLADAVSEIGLATMA 317
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+++ +L ++ P S K +A R++LGGNGI ++ + + M
Sbjct: 318 AYQVGRLKDQDKAAPEMISTVKRNSCGKALAIARDCRDMLGGNGISDEYHIIRHAM 373
>gi|290961561|ref|YP_003492743.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
gi|260651087|emb|CBG74208.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
Length = 396
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 193/369 (52%), Gaps = 8/369 (2%)
Query: 30 VAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP- 88
+A P +P+ F P +D+ D+LL E+ AVR VR + P +A+++E+ E P
Sbjct: 1 MAAPAKSPS--FDP--ADFLGLDELLDPEDLAVRDTVRSWAADRVLPHVADWYERGELPG 56
Query: 89 -FHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTI 147
+ +LGA+ G +++GYGC G S +A E+ D+ + + V SLAM I
Sbjct: 57 IRELARELGAIGALGMSLEGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAI 116
Query: 148 ALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207
GSEEQK+ +LP +A I C+ LTEP +GSD +++ T A + G WIL G+K WI
Sbjct: 117 HRFGSEEQKRTWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKRDGGDWILNGRKMWIT 176
Query: 208 NSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
N + A V V++A+ T + + G++V D PG + +I++K LR +++L V +P
Sbjct: 177 NGSVAGVAVVWAQ--TEDGVRGFVVPTDTPGFSAPEIKHKWSLRASVTSELVLDDVRLPA 234
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ LP V + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q
Sbjct: 235 DAVLPEVKGLKGPLSCLSHARYGIVWGSMGAARASFESAVAYARTREQFGKPIGGFQLTQ 294
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
KL M + IL+ L + + G + P S GK A E R +LG NG
Sbjct: 295 AKLADMAVELHKGILLAHHLGRRMDAGRLRPEQISFGKLNNVREAIEICRTARTILGANG 354
Query: 388 ILSDFLVAK 396
I ++ V +
Sbjct: 355 ISLEYPVMR 363
>gi|226358172|ref|YP_002787911.1| glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
gi|226319815|gb|ACO47809.1| putative glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
Length = 386
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 187/355 (52%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI 105
DY+Q LL +EQ V VR ++ ++ P + E+W+ E P ++ +LGA + G T
Sbjct: 3 DYFQARSLLGPDEQLVMQSVRSYVDGQLMPRIGEWWDSGELPVRELMRELGAQGLLGPTT 62
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + + E+ R D+ + V SL M I GSEEQK++YLP LA
Sbjct: 63 PEEYGGAGASYSAYGAMMYELERCDSGLRSAASVQGSLVMYPILTYGSEEQKRQYLPGLA 122
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD A+ T A + ++L G K WI NS AD V++A++
Sbjct: 123 SGELIGCFGLTEPDGGSDPGAMRTRARRDGDDYVLNGNKMWITNSPVADFAVVWAKDDE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V +DA G + KI K+ LR G+I+L+ +P + LPG + L
Sbjct: 182 GVVRGFIVPRDARGFSTPKIHRKMSLRASVTGEIVLQDCRIPAANLLPGSGGLKSPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ Y R+ FG P+A+ Q+ Q KLV+M+ + A +L+
Sbjct: 242 TSARYGIAWGAMGALESVYETALEYTTGRQTFGQPIASRQLVQDKLVRMVTDHTAGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L L + G M P SL K A L RELLGGNGI +++ V + ++
Sbjct: 302 VQLGALKDAGRMAPTQVSLAKRNNVRVALTGARLARELLGGNGITTEYPVIRHML 356
>gi|299067684|emb|CBJ38893.1| dehydrogenase [Ralstonia solanacearum CMR15]
Length = 397
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 196/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDAAIFREMGALGMLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS A+V V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLSGTKMWITNSPIANVFVVWAKLPDD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+QI G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 NGEDQIRGFILEKGWKGLSAPVIHGKVGLRTSITGEIVLDEVFVPEENLMPGVHGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +R QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ + G S+ K +A + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDDGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|372266821|ref|ZP_09502869.1| acyl-CoA dehydrogenase domain-containing protein [Alteromonas sp.
S89]
Length = 394
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 186/364 (51%), Gaps = 4/364 (1%)
Query: 39 SKFPPCA--SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
SK P A D D L+ EE+ +R RE + + P + E F ++ ++G
Sbjct: 2 SKNQPLAHWDDILLLDRQLSDEERMIRDTAREYCQSRLMPRVLEANRNEIFHREIMEEMG 61
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L + G TI+GY C G + + E+ RVD+ + + V SSL M I GSE QK
Sbjct: 62 ELGLLGSTIEGYDCAGLNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEAQK 121
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
QKYLP LA + C+ LTEP GSD + T A V+GG+ L G K WI NS ADV V
Sbjct: 122 QKYLPKLASGEWVGCFGLTEPDAGSDPGGMKTRAKSVDGGYRLSGSKMWITNSPIADVFV 181
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
++A++ + I G++++K GL+ KIE K LR G+I++ VFVP+E+R P +
Sbjct: 182 VWAKDDEGD-IRGFVLEKGMEGLSAPKIEGKFSLRASITGEIVMDNVFVPEENRFPDIKG 240
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
L +R ++W +G + + +Y +RKQF PLA Q+ Q+KL M
Sbjct: 241 LSGPFGCLNRARYGISWGAMGAAEYCWHAARQYGLDRKQFNKPLAQTQLFQKKLADMQTE 300
Query: 337 IQAMILVGWRLCKLY-EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
I + R+ +L E+ P SL K +A E + R++ GGNGI +F V
Sbjct: 301 ITLGLQGSLRVGRLMDEQKDFDPTMISLVKRNNCGKALEIARIARDMHGGNGIADEFHVI 360
Query: 396 KVIM 399
+ M
Sbjct: 361 RHAM 364
>gi|46198743|ref|YP_004410.1| glutaryl-CoA dehydrogenase [Thermus thermophilus HB27]
gi|46196366|gb|AAS80783.1| glutaryl-CoA dehydrogenase [Thermus thermophilus HB27]
Length = 385
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ V+ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L G K WI N A + VI+A++
Sbjct: 123 GEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+LV D PG +++ K+ LR +++L++V VP+ RLP + L
Sbjct: 182 GEVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ + K R+ FG PLA Q+ Q KL +ML +L+
Sbjct: 242 TQARFGIAWGAMGALEAVYEEAVAFAKSRQTFGEPLAKKQLVQAKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G +TP SL K +A + + R++LGG+GI ++
Sbjct: 302 WRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEY 349
>gi|313679599|ref|YP_004057338.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
profundus DSM 14977]
gi|313152314|gb|ADR36165.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
profundus DSM 14977]
Length = 386
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 184/348 (52%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DYYQ +L + EE+ V+ R+ ++ E+ P + ++WE+ EFP H++ G + G +
Sbjct: 3 DYYQVTELFSPEERQVQAAARKFLDAEVMPHIRDWWERGEFPRHLVRAFGEMGFLGSNLP 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G S + + E+ RVD+ +F V +L M I GSEEQK++YLP LA
Sbjct: 63 EEYGAAGVSANAYGLIMYELERVDSGLRSFASVQGALVMYPIYAYGSEEQKREYLPKLAA 122
Query: 166 LNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ + LTEP GSD + T A K ++L G K WI N + A + +++A++
Sbjct: 123 GEIVGAFGLTEPDGGSDPGGNMKTKAVKDGDHYVLNGTKMWITNGSIAQIAIVWAKDEE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G++V D PG + +I +K+ LR +++L+ V V + LPG S + L
Sbjct: 182 GKILGFIVPTDTPGFSAPEIHHKMSLRASVTSELVLEDVRVHKDQLLPGSGSLRAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + K R FG P+AA Q+ Q KLV ML +L+
Sbjct: 242 TQARYGIAWGVLGALEAVYTEALEFSKSRITFGRPIAARQLIQDKLVYMLSEHTKGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
W+L K+ + G + H SL K A ++ L RE+LG NGI ++
Sbjct: 302 WKLGKMKDAGTLKHTHVSLAKRNNVRVALKSARLAREILGANGITVEY 349
>gi|386360693|ref|YP_006058938.1| acyl-CoA dehydrogenase [Thermus thermophilus JL-18]
gi|383509720|gb|AFH39152.1| acyl-CoA dehydrogenase [Thermus thermophilus JL-18]
Length = 385
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 188/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ ++ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEIQKAARRFLEKEALPYIRDWWEEGVFPVHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVTSAAYGLIAYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L G K WI N A + VI+A++
Sbjct: 123 GEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+LV D PG +++ K+ LR +++L+ V VP+ RLP + L
Sbjct: 182 GEVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEDVRVPESLRLPKAEGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ + K R FG PLA Q+ Q KL +ML +L+
Sbjct: 242 TQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G +TP SL K +A + + R++LGG+GI ++
Sbjct: 302 WRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEY 349
>gi|427789679|gb|JAA60291.1| Putative glutaryl-coa dehydrogenase [Rhipicephalus pulchellus]
Length = 418
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 183/340 (53%), Gaps = 2/340 (0%)
Query: 62 VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIA 121
VR VR+ + + P + F ++ +LG L V G T++GYGC G S +
Sbjct: 47 VRDTVRDYCQTRLQPRVLLANRHETFDRDIVHELGELGVLGSTLQGYGCAGTSYVAYGLT 106
Query: 122 IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGS 181
E+ RVD+ + + V SSL ML I L G+EEQKQ+YLP LA+ + C+ LTEP +GS
Sbjct: 107 AREVERVDSGYRSTMSVQSSLVMLPIYLFGTEEQKQRYLPRLAKGELLGCFGLTEPNHGS 166
Query: 182 DASALNTTATK--VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGL 239
+ L T A + + L G K WI NS ADV V++A+ I ++++K PGL
Sbjct: 167 NPGGLETRARHDPLARTYTLNGSKTWITNSPEADVFVVWAKCEEDGIIRAFVLEKGTPGL 226
Query: 240 TVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299
T +IE K LR G I+++ V VP++ LP + T + L +R ++W +G +
Sbjct: 227 TAPRIEGKFSLRASATGMIIMEDVTVPEDALLPASRGLKSTFQCLTSARYGISWGALGAA 286
Query: 300 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPG 359
+ +Y +R QFG PLA+ Q+ Q+KL M+ I + R+ +L+++G++ P
Sbjct: 287 EFCLETARQYTLDRHQFGRPLASNQLVQKKLADMVTEISLGLQACLRVGRLFDQGSLCPE 346
Query: 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
SL K +A + R++LGGNGI ++ V + +M
Sbjct: 347 MVSLVKRNSCGKALDIARTARDMLGGNGISDEYHVIRHVM 386
>gi|390597176|gb|EIN06576.1| acyl-CoA dehydrogenase NM domain-like protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 397
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 185/350 (52%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + +LT +E A+R R ++ +AP + E W +F ++ ++G L + G TI
Sbjct: 14 DSLDLESMLTEDEIAIRDTARSYCQERLAPRVIEAWRTEKFTPEIMKEMGELGLLGPTID 73
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + EI R+D+ + V SSL M I GS+ QK+++LP+LA+
Sbjct: 74 GYGCAGASSVAYGLIAREIERIDSGYRSTASVQSSLVMHPIHAFGSDFQKERFLPALAKG 133
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ I C+ LTEP +GSD + TTA +V+GG+++ G K WI N+ ADV VI+AR N+
Sbjct: 134 DLIGCFGLTEPNHGSDPGGMETTAAEVDGGFVINGSKTWISNAPIADVFVIWARCKWDNK 193
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++++K GL+ I+NK+ LR+ G + + V V + LP S L
Sbjct: 194 VRGFILEKGMKGLSAPPIKNKLALRVSLTGSVFMDNVKVSHDALLPKSRSLGSAFSCLNN 253
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G Y ERKQF P+ +FQ+ Q+KLV + +L +
Sbjct: 254 ARYGISWGVMGALEDCVSRALAYSLERKQFDRPIGSFQLVQKKLVDAQSEVTLGLLASLQ 313
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L ++G + P SL K +A E ++LGGN ++ + +
Sbjct: 314 VGRLKDQGKLAPEMVSLVKRNNCGKALEHSRRVLDVLGGNACADEYHIGR 363
>gi|190895532|ref|YP_001985824.1| glutaryl-CoA dehydrogenase [Rhizobium etli CIAT 652]
gi|190699477|gb|ACE93561.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 395
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 191/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT+EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTNEERMVQDTAHAYAQQKLAPRVLDAFRNEKTDTAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 AGEWIGCFGLTEPDHGSDPGSMATRARKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|403715194|ref|ZP_10940979.1| glutaryl-CoA dehydrogenase [Kineosphaera limosa NBRC 100340]
gi|403210962|dbj|GAB95662.1| glutaryl-CoA dehydrogenase [Kineosphaera limosa NBRC 100340]
Length = 399
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 180/353 (50%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGT 104
D DD LT EE+AVR VR EKEI P +A+++E E P + LG + + G
Sbjct: 14 DLADIDDQLTDEEKAVREAVRTVCEKEIDPHVAQWFEAGELPTVRELAKTLGEVGLLGMH 73
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ++LP +A
Sbjct: 74 LDGYGCAGMSAVDYGLACLELEASDSGIRSLVSVQGSLAMFGIWRWGSEEQKQEWLPQMA 133
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
+ I C+ LTEP +GSD ++ T A K W+L G+K WI N + ADV V++A
Sbjct: 134 TGDAIGCFGLTEPDHGSDPGSMRTRARKDGDDWVLSGRKMWITNGSVADVAVVWANAGEE 193
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V PG + I++K+ LR +++L +V +P P V +
Sbjct: 194 HGGIRGFVVPTATPGFSAPVIKHKMSLRASVTSELVLDEVRLPGTAIFPEVRGLKGPLSC 253
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W +G + ++ Y KER QFG P+ FQ+ Q KL QM + L+
Sbjct: 254 LNEARYGIIWGSMGAARSAFESALNYSKERTQFGRPIGGFQLTQNKLAQMSNELTLGTLL 313
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P S+GK ++A E R +LG NGI ++ V +
Sbjct: 314 ALHLGRRKDAVGLRPDQVSIGKLNNVSKAIEICRTARTILGANGISLEYPVIR 366
>gi|427430663|ref|ZP_18920425.1| Glutaryl-CoA dehydrogenase [Caenispirillum salinarum AK4]
gi|425878632|gb|EKV27346.1| Glutaryl-CoA dehydrogenase [Caenispirillum salinarum AK4]
Length = 393
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LT EE+ VR ++++ P + +E+ F ++ ++G L + G TI+
Sbjct: 8 DPFLLDQQLTDEERMVRDSAYAYCQEKLLPRVTSAFEEERFDREIMNEMGELGLLGPTIE 67
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YGC G S + E+ RVD+ + + V SSL M I GSEEQK+KYLP LA
Sbjct: 68 EEYGCSGVSHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQKKKYLPKLAT 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTTT 224
+ C+ LTEP GSD ++ T A KV+GG++L G K WI NS +D+ +++A+ +
Sbjct: 128 GEWVGCFGLTEPDAGSDPGSMKTRAKKVDGGYLLSGSKMWITNSPISDIAIVWAKSDAHD 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N+I G++V+ ++ G + KI+ K LR G+I+L + FVP+E+ LP + L
Sbjct: 188 NKIKGFIVEANSKGFSAPKIDQKASLRASITGEIVLDECFVPEENLLPNASGLGGPFGCL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y +RKQFG PLA Q+ Q KL M I +
Sbjct: 248 NKARYGIAWGTMGAAEDCWHRARQYTLDRKQFGRPLAHTQLVQLKLANMQTEITLGLQAA 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G P SL K +A + + R++ GGNGI +F V +
Sbjct: 308 LRVGRLIDEGNWAPEMISLIKRNNCGKALDIARIARDMHGGNGISLEFQVIR 359
>gi|402226262|gb|EJU06322.1| acyl-CoA dehydrogenase domain-containing protein [Dacryopinax sp.
DJM-731 SS1]
Length = 423
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 189/353 (53%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D LLT EE+A+R R ++++ P + E + EF ++ ++G L + G TI+
Sbjct: 40 DPLNLDSLLTEEERAIRDMARSYCQEKLQPRVLEAYRTEEFEPAILKEMGELGLLGATIE 99
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD+ + + V SSL M I G+EEQK+KYLP LA+
Sbjct: 100 GYGCAGVSNVAYGLIAREVERVDSGHRSTMSVQSSLTMHPIFEFGTEEQKEKYLPGLAKG 159
Query: 167 NTIACWALTEPAYGSDASALNTTATKVE-GGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++++T A++ GG+++ G K WI N+ +AD+ +I+A+ N
Sbjct: 160 ELIGCFGLTEPNHGSDPASMDTVASEAPGGGYVINGAKTWISNAPYADIFIIWAKCKWDN 219
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K GL+ I+NK+ LR G I ++ V VP + LP V + L
Sbjct: 220 LIRGFILEKGMEGLSAPAIKNKLMLRASITGSIFMENVQVPAANLLPNVTGLKGPFSCLN 279
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R ++W +G Y ER QF PLAAFQ+ Q+KL +L +
Sbjct: 280 SARYGISWGVMGALEDCIARARSYALERHQFNKPLAAFQLVQKKLADAHTEATLGLLASY 339
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
++ +L ++G P SL K +A E E+ GGN + ++ + + +
Sbjct: 340 QVGRLKDQGQWCPEMISLVKRNNCGKAVEGSRKLMEIFGGNSVSDEYHIGRHV 392
>gi|424919801|ref|ZP_18343164.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392848816|gb|EJB01338.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 395
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTDEERMVQNTAHAYAQEKLAPRVLDAFRNEKTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|386334267|ref|YP_006030438.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum Po82]
gi|334196717|gb|AEG69902.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum Po82]
Length = 419
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 195/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 32 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 91
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 92 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 151
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG++L G K WI NS ADV V++A+
Sbjct: 152 TGEWIGCFGLTEPNHGSDPASMVTRARKVDGGYLLTGAKMWITNSPIADVFVVWAKLPDE 211
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 212 NGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 271
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +R QFG PLAA Q+ Q+KL M I +
Sbjct: 272 TCLNSARYGIAWGALGAAESCWHIARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGL 331
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 332 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 389
>gi|452962660|gb|EME67775.1| Acyl-CoA dehydrogenase [Magnetospirillum sp. SO-1]
Length = 392
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 191/353 (54%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + +D L+ +E+ +R ++++ P + + + F ++ ++G + + G TI
Sbjct: 7 DDPFLLEDQLSEDEKLIRDSAHAYCQEKLQPRVMKAFRDETFDREIMNEMGEMGLLGPTI 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ +G PG + + E+ RVD+ + + V SSL M I G+EEQK+KYLP LA
Sbjct: 67 PEEFGGPGVNHVAYGLISREVERVDSGYRSAMSVQSSLVMHPIFTYGTEEQKKKYLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
I C+ LTEP GSD + T A KV+GG++L G K WI NS +D+ +++A+ +
Sbjct: 127 TGEIIGCFGLTEPDAGSDPGGMRTRAKKVDGGYLLTGSKMWITNSPISDIAIVWAKSDAH 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++V+K G T KIE K+ LR G+I+L + FVPDE +P V+
Sbjct: 187 EGKIKGFIVEKGTKGFTTPKIEGKLSLRASITGEIVLDEAFVPDEALMPNVSGLGGPFGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG + + +Y+ +RKQFG PLAA QI Q KL M+ I +
Sbjct: 247 LNKARYGIAWGVIGAAEFCWHASRQYMLDRKQFGRPLAANQIPQLKLANMMTEITLGLQA 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ ++G P SL K +A + + R++ GGNGI +F V +
Sbjct: 307 CVRVGRMMDEGTWAPEAVSLIKRNNCGKALDIARMSRDMHGGNGISEEFHVIR 359
>gi|357414253|ref|YP_004925989.1| acyl-CoA dehydrogenase [Streptomyces flavogriseus ATCC 33331]
gi|320011622|gb|ADW06472.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
flavogriseus ATCC 33331]
Length = 409
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 185/364 (50%), Gaps = 6/364 (1%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKL 95
SK PP D DDLL E+ A+R VR + P +AE++E E P + +L
Sbjct: 13 SKAPPFDPGDPLGIDDLLDPEDLAIRDTVRTWAADRVLPHIAEWYENGELPGIRELAREL 72
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G+L G ++KGYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 73 GSLGALGMSLKGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQ 132
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
K+++LP +A TI C+ LTEP +GSD + + T A + W+L G+K WI N + A V
Sbjct: 133 KERWLPGMAAGETIGCFGLTEPDHGSDPAGMRTRAERDGTDWVLTGRKMWITNGSVAGVA 192
Query: 216 VIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V++A+ + I G++V D+PG + +I +K LR +++L V +P + LP
Sbjct: 193 VVWAQTDEEGGGSGIRGFVVPTDSPGFSAPEIRHKWSLRASVTSELVLDGVRLPADAVLP 252
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
G + L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL
Sbjct: 253 GATGLRGPLSCLSHARYGIVWGAMGAARASFEAALDYAKSREQFGRPIGGFQLTQAKLAD 312
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NG+ ++
Sbjct: 313 MALELHKGILLAHHLGRRMDAGRIRPEQVSFGKLNNVREAIEICRTSRTILGANGVSLEY 372
Query: 393 LVAK 396
V +
Sbjct: 373 PVMR 376
>gi|408533011|emb|CCK31185.1| Glutaryl-CoA dehydrogenase [Streptomyces davawensis JCM 4913]
Length = 392
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 185/362 (51%), Gaps = 6/362 (1%)
Query: 37 PASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPK 94
P F P +D DDLL E+ AVR VR + P +AE++E E P + +
Sbjct: 2 PLPPFDP--ADPLGIDDLLEPEDLAVRDTVRRWAADRVLPHVAEWYESGELPVIRELARE 59
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG + G ++ GYGC G + +A E+ D+ + + V SLAM I GSEE
Sbjct: 60 LGGIGALGMSLSGYGCAGATAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRYGSEE 119
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ +LP +A I C+ LTEP GSD +A+ T A + G W+L G+K WI N + A V
Sbjct: 120 QKQSWLPRMASGEVIGCFGLTEPDIGSDPAAMRTYAKRDGGDWVLTGRKMWITNGSVAGV 179
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A+ T + I G++V D+PG +I++K+ LR ++++ +V + + LPGV
Sbjct: 180 AVVWAQ--TEDGIRGFVVPTDSPGFAAPEIKHKMSLRASVTSELVMDEVRLSADAVLPGV 237
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M
Sbjct: 238 TGLRGPLSCLSHARYGIVWGSMGAARSCFETAVDYAKSREQFGRPIGGFQLTQAKLADMA 297
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ IL+ L + + G + P S GK A + R +LG NGI ++ +
Sbjct: 298 VELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTILGANGISLEYPI 357
Query: 395 AK 396
+
Sbjct: 358 MR 359
>gi|404253284|ref|ZP_10957252.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas sp.
PAMC 26621]
Length = 394
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 192/356 (53%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DD L +E+ +R R + ++AP + + ++ + ++GAL + G T+
Sbjct: 10 ADPFFLDDQLEDDERMIRDTARAYAQDKLAPRIVDAFQHETTDPEIFREMGALGLLGPTV 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + E+ R+D+ + + V SSL M I GSEEQKQKYLP LA
Sbjct: 70 PEEYGGVGASYVAYGLVAREVERIDSGYRSMMSVQSSLVMYPILAYGSEEQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
I C+ LTEP GSD ++T A KV+GG++L G K WI NS ADV VI+A+ +
Sbjct: 130 TGEWIGCFGLTEPDAGSDPGGMSTRAKKVDGGYLLSGAKTWISNSPIADVFVIWAKSDAH 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++V+K A GLT KIE K+ LR G IL+ ++ + ++ LP V +
Sbjct: 190 GDGIRGFIVEKGAKGLTAPKIEGKLSLRASITGMILMDEIELSEDALLPNVQGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +R+QFG PLA Q+ Q+KL M I +
Sbjct: 250 LNRARYGISWGSLGAAEFCFHAARQYGLDRQQFGTPLAGRQLFQKKLADMETEIALGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++G P S+ K +A + + R++ GGNGI ++ V + +M
Sbjct: 310 SLRVGRLMDQGRFAPEMISIVKRNNVGKALDIARMARDMHGGNGISGEYQVMRHMM 365
>gi|441206892|ref|ZP_20973314.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis MKD8]
gi|440628200|gb|ELQ90000.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis MKD8]
Length = 399
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 181/353 (51%), Gaps = 3/353 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP-KLGALRVAGG 103
A D + +L++EE+ +R VR +++ I P +A ++E E P + +LG L + G
Sbjct: 16 ADDLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGM 75
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+KGYGC G S +A E+ D+ + + V SLAM I GS+EQK ++LP +
Sbjct: 76 HLKGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDM 135
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + I C+ LTEP +GSD + + T AT+ WIL G K WI N + ADV V++AR T
Sbjct: 136 ASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWAR--T 193
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++V D PG T I++K+ LR +++L V +PD RLPG +
Sbjct: 194 DEGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATGLGAPLRC 253
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + + +G + + Y R+QF P+ FQ+ QQKL M L+
Sbjct: 254 LNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLL 313
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + G + P SLGK A E R +LG +GI ++ V +
Sbjct: 314 ALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMR 366
>gi|421856489|ref|ZP_16288854.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403188065|dbj|GAB75055.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 407
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 188/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L EE+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 19 DPFLLEQQLNEEERMVRDTAAAYCQDKLMPRVLEQFRHEKTDPAIFREMGELGLLGPTIP 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 79 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGSEEQKQKYLPKLAT 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT- 224
I C+ LTEP +GSD +++T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 139 GEFIGCFGLTEPDHGSDPGSMSTRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSNE 198
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+ + P V +
Sbjct: 199 GNVGPIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEGNAFPEVQGLRGPF 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 259 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + L R++LGGNGI +F VA+
Sbjct: 319 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARLARDMLGGNGISDEFGVAR 373
>gi|226941807|ref|YP_002796881.1| glutaryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
gi|226716734|gb|ACO75872.1| Probable glutaryl-CoA dehydrogenase [Laribacter hongkongensis
HLHK9]
Length = 396
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 189/353 (53%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D Q + LT EE+ +R R + +AP E + +F ++ ++G + G T+
Sbjct: 15 DPLQLEQQLTDEERLIRDSARSFCQARLAPRAREAFRHEQFDRDIMREMGEQGLLGCTLN 74
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
+GC G S + E+ RVD+ + + V SSL M IA GS EQ+ ++LP LA+
Sbjct: 75 DWGCAGVSHVAYGLVAREVERVDSGYRSAMSVQSSLVMYPIATYGSPEQQARWLPGLARG 134
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP GSD ++++ A KV+GG++L G K WI NS ADVL+++AR+ +
Sbjct: 135 ELVGCFGLTEPDAGSDPGSMHSRARKVDGGYLLSGSKMWITNSPIADVLLVWARDDAGD- 193
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+++++ GL+ KIE K LR G+I++ V VPD LPGV + L
Sbjct: 194 IRGFVLERGMAGLSTPKIEGKFSLRASVTGEIVMDGVMVPDSHCLPGVRGLKGPFSCLNK 253
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +A +G + + +Y+ +R QFG PLAA Q+ Q KL +M I + +
Sbjct: 254 ARYGIALGALGAAESCWHTARQYVLDRLQFGRPLAANQLVQWKLAEMQTEIALGLQAALQ 313
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L + G P SL K +A + R++LGGNGI +F V + ++
Sbjct: 314 VGRLMDAGTAAPEMVSLIKRNNCGKALGIARMARDMLGGNGISDEFGVIRHVL 366
>gi|55980758|ref|YP_144055.1| glutaryl-CoA dehydrogenase [Thermus thermophilus HB8]
gi|145579313|pdb|2EBA|A Chain A, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579314|pdb|2EBA|C Chain C, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579315|pdb|2EBA|D Chain D, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579316|pdb|2EBA|E Chain E, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579317|pdb|2EBA|F Chain F, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579318|pdb|2EBA|G Chain G, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579319|pdb|2EBA|H Chain H, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|145579320|pdb|2EBA|I Chain I, Crystal Structure Of The Putative Glutaryl-coa
Dehydrogenase From Thermus Thermophilus
gi|55772171|dbj|BAD70612.1| putative glutaryl-CoA dehydrogenase [Thermus thermophilus HB8]
Length = 385
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 189/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ V+ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD T + EG W+L G K WI N A + VI+A++
Sbjct: 123 GEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+LV D PG +++ K+ LR +++L++V VP+ RLP + L
Sbjct: 182 GEVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ + K R FG PLA Q+ Q KL +ML +L+
Sbjct: 242 TQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G +TP SL K +A + + R++LGG+GI ++
Sbjct: 302 WRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEY 349
>gi|123187384|gb|ABM69268.1| GcdH [Azoarcus sp. CIB]
Length = 395
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT E+ VR R ++ + P + E + + + ++G L + G TI
Sbjct: 11 ADPLYLDSQLTDTERMVRDSARAYSQERLLPRVQEAFRHEKTDRAIFNEMGELGLLGATI 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I GSEE KQKYLP LA
Sbjct: 71 PEQYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEETKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++
Sbjct: 131 TGEWVGCFGLTEPNHGSDPGSMVTRARKVDGGYSLSGAKMWITNSPIADVFVVWAKDDAG 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++++K GL+ I K+GLR G+I++ +VF P+E+ P V + L
Sbjct: 191 D-IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ +Y +RKQFG PLAA Q+ Q+KL ML I +
Sbjct: 250 NSARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLIQKKLADMLTEITLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 310 LRLGRLKDEGNAPVELTSIMKRNSCGKSLDIARVARDMLGGNGISDEFCIAR 361
>gi|299134538|ref|ZP_07027730.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
gi|298590348|gb|EFI50551.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
Length = 407
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 183/338 (54%), Gaps = 1/338 (0%)
Query: 62 VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIA 121
+R R+ + + P + E F V+ ++ L G TI GYGC G S +
Sbjct: 41 IRDTARDYAQSHLMPRILEANRDESFDRTVMKEMADLGFLGATIDGYGCAGISYVSYGLI 100
Query: 122 IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGS 181
+ E RVD S + + V ++L+M+ I GSE Q+ KYLP++A+ + C+ LTEP +GS
Sbjct: 101 MREFERVDTSFRSALGVQTTLSMVPIYAYGSEAQRDKYLPAMAKGEILGCFGLTEPDHGS 160
Query: 182 DASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTV 241
D ++ T A KV GG+ L G K WI ++ AD++V++A++ + I G+++++ GL+
Sbjct: 161 DPGSMKTRAKKVPGGYRLTGGKTWITHAPIADIMVVWAKD-DQDVIRGFILERGMAGLST 219
Query: 242 TKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMG 301
KIENK +R G I ++ VFVP+E+ LPGV + L +R + W +G +
Sbjct: 220 AKIENKFSVRASPTGQIFMEDVFVPEENLLPGVQGLKGPFGCLNNARFGIIWGAMGAAEF 279
Query: 302 VYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361
+ +Y +RKQFG PLAA Q+ Q+KL M I +L + +L + G TP
Sbjct: 280 CWHAARQYSMDRKQFGRPLAANQLIQKKLADMQTEISIGLLACLHVSRLRDAGKATPEML 339
Query: 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
SL K +A + R++ GGNGI ++ V + +M
Sbjct: 340 SLLKRNCAGKALDIARAARDIHGGNGISDEYHVIRHLM 377
>gi|297195238|ref|ZP_06912636.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
gi|197719681|gb|EDY63589.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
Length = 396
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 188/361 (52%), Gaps = 5/361 (1%)
Query: 39 SKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKL 95
SK PP D DDLL E+ A+R VR + P +A+++E+ E P + +L
Sbjct: 5 SKLPPFDPGDPLGIDDLLHDEDLAIRDTVRAWATDRVLPHIADWYERGELPGIRDLAREL 64
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G++ G +++GYGC G + +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 65 GSIGALGMSLEGYGCAGATAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQ 124
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A I C+ LTEP +GSD +A+ T A + W+L G+K WI N + A V
Sbjct: 125 KQRWLPGMAAGEIIGCFGLTEPDHGSDPAAMRTHAKRDGSDWVLTGRKMWITNGSVAGVA 184
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A+ T + I G++V DAPG + +I++K LR ++++ +V +P + LP V
Sbjct: 185 VVWAQ--TDDGIRGFVVPTDAPGFSAPEIKHKWSLRASVTSELVMDEVRLPADAVLPDVT 242
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL M
Sbjct: 243 GLRGPLSCLSHARYGIVWGSMGAARSSFEAAVSYARTREQFGRPIGGFQLTQAKLADMAV 302
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
+ IL+ L + G + P S GK A E R +LG NGI ++ V
Sbjct: 303 ELHKGILLAHHLGVRMDAGKLRPEQVSFGKLNNVREAIEICRTSRTILGANGISLEYPVM 362
Query: 396 K 396
+
Sbjct: 363 R 363
>gi|241662385|ref|YP_002980745.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
pickettii 12D]
gi|240864412|gb|ACS62073.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
Length = 397
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 195/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTDDERMVRDAAASYCQDKLMPRVLESFRHEKTDASIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP L
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLV 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++ + +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMITRAKKVDGGYSLSGAKMWITNSPIADVFVVWGKLPND 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K GLT I K+GLR G+I+L +VFVP+E+ +PGV +
Sbjct: 190 NGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|452959479|gb|EME64816.1| acyl-CoA dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 396
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 183/354 (51%), Gaps = 4/354 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAG 102
A D D L + +E AVR VR + +AP +AE++E + P + + G L V G
Sbjct: 12 ARDPLTIDSLYSDDELAVRDTVRRFCTEHVAPHIAEWFEAGDLPGIRELTREFGKLGVLG 71
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
++GYGC G S +A E+ D+ + + V SLAM +I GSEEQKQ++LP
Sbjct: 72 MHLEGYGCGGSSAVHYGLACLELEAADSGIRSLVSVQGSLAMFSIWNNGSEEQKQRWLPG 131
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A I C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV V++A
Sbjct: 132 MAAGEIIGCFGLTEPDVGSDPAAMKTRARRDGSDWVLDGRKMWITNGSIADVAVVWA--N 189
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
T + G++V D PG + I++K+ LR G+++L V +P + LP + +
Sbjct: 190 TDEGVRGFVVPTDTPGFSANTIKHKLSLRASVTGELVLDNVRLPADALLPEGKGVKAPLQ 249
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L+ +R + W +G + ++ Y +R QFG P+ FQ+ Q KL M + L
Sbjct: 250 SLSEARYGIIWGAMGAARSAWEAARDYSMQRTQFGRPIGGFQLTQAKLADMAVELHKGQL 309
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ L +L + + P S GK T A E R +LGGNGI ++ V +
Sbjct: 310 LSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPVIR 363
>gi|300771433|ref|ZP_07081308.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33861]
gi|300761422|gb|EFK58243.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
33861]
Length = 386
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 192/354 (54%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
DY+Q D+LL+ E+ +R VRE + KEI P++ E ++ + ++ KLGA+ G I
Sbjct: 5 DYFQIDELLSEEQLMIRNTVREFVNKEIRPVIDEAAQQHKDIPGLMQKLGAIGALGPYIP 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ D++ + V SSL M I GSEEQK+K+LP LA
Sbjct: 65 QEYGGAGLDQLSYGLIMQELEAGDSAVRSAASVQSSLVMFPIYTYGSEEQKRKFLPKLAT 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I + LTEP +GSD A+ T +K G+IL G K WI N+ D+ V++AR+
Sbjct: 125 GELIGSFGLTEPNHGSDPGAMETRLSKDGDGYILTGAKMWITNAPVCDLAVVWARDEE-G 183
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
++ G +V++ G T + NK LR + G+++ + V +P + LP V+S + L
Sbjct: 184 KVKGIIVERGMNGFTTPETHNKWSLRASKTGELIFEDVRIPQANILPDVSSMKGPLSCLN 243
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R ++W IG ++ Y RY ER+QFG P+A++Q+ Q+KL + L I L+ W
Sbjct: 244 SARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKKLAEFLTEITKAQLLSW 303
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL L +G TP S+ K A + R++LG GI+ +F + + +M
Sbjct: 304 RLGVLKNEGKATPQQISMAKRNNVNMALQIARESRQMLGAMGIVGEFPIMRHMM 357
>gi|94967641|ref|YP_589689.1| acyl-CoA dehydrogenase [Candidatus Koribacter versatilis Ellin345]
gi|94549691|gb|ABF39615.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
versatilis Ellin345]
Length = 392
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 2/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + D LLT +E+ VR R +E+ + PI+ + FP +I +G L G +K
Sbjct: 9 DYIELDTLLTDDERLVRDNTRRFIEENLIPIIEQCNRDGRFPKELIQPMGELGFFGANLK 68
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC + E+ R D+ +F+ V S+L M I GS+ QK K+LP++A+
Sbjct: 69 GYGCAEMGNVEYGLMTQELERGDSGVRSFVSVQSALVMYPIYTFGSDAQKDKWLPAMAKG 128
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTTTN 225
+ C+ LTEP GS+ SA+ T A K +I+ G+K WI + + ADV VI+A+
Sbjct: 129 EKLGCFGLTEPDAGSNPSAMRTRARKEGNDYIISGEKMWITSGSIADVAVIWAKVEDEGG 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
++ G+LV+ D PG + K LR + L+ V +P E+ LP + + L
Sbjct: 189 RVRGFLVETDRPGFVAKDVHGKWSLRASVTSSLSLQDVRIPAENLLPKSDGLKSPLMCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW IG +M YD +Y + RKQF P+A Q+ Q+KLV M+ I L+
Sbjct: 249 QARYGIAWGAIGAAMACYDCALQYAQFRKQFHDMPIAGHQLVQEKLVWMITEITKAQLLA 308
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ +L ++G H S+ K A E + R++LGGNGI ++ V + +M
Sbjct: 309 LQVGRLKDQGKAGHQHISMAKRNNVWMALECARMARDILGGNGIADEYPVFRHMM 363
>gi|395492958|ref|ZP_10424537.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas sp.
PAMC 26617]
Length = 394
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 191/356 (53%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DD L +E+ +R R + ++AP + + ++ + ++GAL + G T+
Sbjct: 10 ADPFFLDDQLEDDERMIRDTARAYAQDKLAPRIVDAFQHETTDPEIFREMGALGLLGPTV 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + E+ R+D+ + + V SSL M I GSEEQKQKYLP LA
Sbjct: 70 PEEYGGVGASYVAYGLVAREVERIDSGYRSMMSVQSSLVMYPILAYGSEEQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
I C+ LTEP GSD + T A KV+GG++L G K WI NS ADV VI+A+ +
Sbjct: 130 TGEWIGCFGLTEPDAGSDPGGMTTRAEKVDGGYLLSGAKTWISNSPIADVFVIWAKSDAH 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++V+K A GLT KIE K+ LR G IL+ ++ + ++ LP V +
Sbjct: 190 GDGIRGFIVEKGAKGLTAPKIEGKLSLRASITGMILMDEIELSEDALLPNVQGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +R+QFG PLA Q+ Q+KL M I +
Sbjct: 250 LNRARYGISWGSLGAAEFCFHAARQYGLDRQQFGTPLAGRQLFQKKLADMETEIALGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++G P S+ K +A + + R++ GGNGI ++ V + +M
Sbjct: 310 SLRVGRLMDQGRFAPEMISIVKRNNVGKALDIARMARDMHGGNGISGEYQVMRHMM 365
>gi|91094295|ref|XP_971662.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum]
gi|270014404|gb|EFA10852.1| hypothetical protein TcasGA2_TC001629 [Tribolium castaneum]
Length = 418
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 189/357 (52%), Gaps = 5/357 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT EE++VR R ++++ P + + F ++ ++GAL V G TIK
Sbjct: 34 DPLNLESQLTDEEKSVRDSFRAYCQEKLQPRIIQANRNETFDREIMAEMGALGVLGCTIK 93
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
YGC G S G + E+ RVD++ + + V SSL M I GS+EQK++YLP LA+
Sbjct: 94 EYGCAGISNVGYGLLTREVERVDSAYRSAVSVQSSLVMGAIYYFGSKEQKEEYLPKLAKG 153
Query: 167 NTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD S++ T A + L G K WI N+ ADVL+I+ +N
Sbjct: 154 EIIGCFGLTEPNHGSDPSSMETRAKFNSSSKTYTLNGSKTWITNAPLADVLIIWGKN-DD 212
Query: 225 NQINGYLV--KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+I G+L+ KK GL KI+ K LR G IL+ V +P+ + LP V +
Sbjct: 213 GKIRGFLIDRKKHGKGLDTPKIQGKFSLRASTTGMILMDGVEIPESNILPNVEGLKGPFS 272
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + Y ERKQFG PLAA Q+ Q+K M+ +I +
Sbjct: 273 CLNNARYGIAWGALGAAESCLHIARNYTLERKQFGRPLAANQLMQKKFADMITDISLGLQ 332
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ +L +K TP SL K +A + R++LGGNGI ++ + + +M
Sbjct: 333 GCLQVGRLMDKKLHTPEMISLLKRNNAGKALVIARVARDMLGGNGIHDEYHIIRHVM 389
>gi|170097926|ref|XP_001880182.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
gi|164644620|gb|EDR08869.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
Length = 424
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 197/394 (50%), Gaps = 7/394 (1%)
Query: 6 SKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCA-SDYYQFDDLLTSEEQAVRM 64
S+HQ A + FN P + P + SKF D + LT EE A+R
Sbjct: 5 SRHQPARIVRAYTHAFNKPVV------PTSRGVSKFAKYHWEDPLNLESQLTDEEIAIRD 58
Query: 65 KVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAE 124
R+ ++ + P + + W EF ++P++G L + G TI G+GC G S + E
Sbjct: 59 TARQYCQENLMPRVLKGWRTEEFDHDILPEMGKLGLLGPTITGFGCAGVSNVAYGLIARE 118
Query: 125 IARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDAS 184
I RVD+ + V SSL M I G+E QK+KYLP LA+ I + LTEP +GSD +
Sbjct: 119 IERVDSGYRSTASVQSSLVMHPINEFGTEAQKEKYLPLLAKGELIGAFGLTEPNHGSDPA 178
Query: 185 ALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKI 244
+ TTA +V+GG+IL G K WI N+ ADV +++A N+I G+++ K GLT I
Sbjct: 179 GMETTAEEVDGGFILNGSKTWITNAPVADVFIVWANCKWDNRIRGFILDKGLKGLTAPAI 238
Query: 245 ENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYD 304
+NK+ LR G I + V V + LP L +R ++W +G +
Sbjct: 239 KNKVALRASLTGSIFMDSVRVSGDALLPKSKGLGSAFSCLNSARYGISWGVMGALEDCIE 298
Query: 305 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364
Y ER QF PLA+FQ+ Q+KLV + +L ++ +L ++G + P S+
Sbjct: 299 RTRAYALERHQFNRPLASFQLVQKKLVDAQIEVALGLLASLQVGRLKDEGKLAPEMVSMI 358
Query: 365 KSWITARARETVALGRELLGGNGILSDFLVAKVI 398
K +A + + ++LGGN ++ V + +
Sbjct: 359 KKNNCGKALQHSRVVLDILGGNAAADEYHVGRHV 392
>gi|226361794|ref|YP_002779572.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
gi|226240279|dbj|BAH50627.1| putative glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
Length = 397
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIP 93
T A P A D D + + +E AVR VR+ + + P +A+++E + P +
Sbjct: 3 THAQPRPFSAVDPLDIDSMYSDDELAVRDTVRKFCAEHVTPHVADWFEAGDLPGARELAK 62
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+ G L V G ++GYGC G S +A E+ D+ + + V SLAM +I GSE
Sbjct: 63 EFGKLGVLGMHLEGYGCGGSSAVHYGLACLELEACDSGIRSLVSVQGSLAMFSIWNNGSE 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQK ++LP +A I C+ LTEP GSD ++++T A + WIL G+K WI N + AD
Sbjct: 123 EQKNQWLPGMAAGEIIGCFGLTEPDVGSDPASMSTRAKRDGSDWILNGRKMWITNGSIAD 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++A T + I G++V D PG + I++K+ LR +++L V +P+ LP
Sbjct: 183 VAVVWA--ATDDGIRGFIVPTDTPGFSAPLIKHKMSLRASVTSELVLDNVRLPESAMLPD 240
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+ L+ +R + W +G + ++ +Y K+R QFG P+ FQ+ Q KL M
Sbjct: 241 ARGVRAPLSSLSEARYGIVWGAMGAARSAWEAALQYSKDRAQFGRPIGGFQLTQAKLADM 300
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ L+ L +L + + P S GK T A E R +LGGNGI +F
Sbjct: 301 AVELHKGQLLSLHLGRLKDTAGLRPDQVSFGKLNNTREAIEICRTARTILGGNGISLEFP 360
Query: 394 VAK 396
V +
Sbjct: 361 VIR 363
>gi|383781834|ref|YP_005466401.1| putative acyl-CoA dehydrogenase [Actinoplanes missouriensis 431]
gi|381375067|dbj|BAL91885.1| putative acyl-CoA dehydrogenase [Actinoplanes missouriensis 431]
Length = 393
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 8/349 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D LL+ EE+ ++ VR + + P +AE++E FP + P+LG L + G +
Sbjct: 13 DLLDVTGLLSDEERQIQETVRRFVADRVRPHVAEWFEAGTFPRELAPELGKLGLLGMHLD 72
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ D+ +F+ V SLAM +I GSEEQKQ++LP +A
Sbjct: 73 GYGCAGTSAVAYGLACLELEAGDSGLRSFVSVQGSLAMFSIWKYGSEEQKQEWLPRMAAG 132
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + + T AT+ G WIL G K WI N + ADV ++A+ T +
Sbjct: 133 EAIGCFGLTEPDFGSDPANMRTRATRDGGDWILTGTKMWITNGSIADVATVWAQ--TEDG 190
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G+LV + PG T I+ K+ LR G+++L +V +PD RLP L+
Sbjct: 191 IRGFLVPRGTPGFTSRTIKQKLSLRASITGELILDEVRLPDSARLPEARGLGAPLGCLSE 250
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R + + G + Y R QFG P+AAFQ+ Q+KL M + +L+
Sbjct: 251 ARFGIIFGSAGAARDSLRAALDYANSRVQFGRPIAAFQLTQEKLANMAVGLNTSLLLALH 310
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L +L + GA+ P S+GK R +A+ RE +LGG+GI ++
Sbjct: 311 LGRLKDAGAIKPHQISVGK---LNNVRTALAIARECRTILGGSGITLEY 356
>gi|381190485|ref|ZP_09898007.1| glutaryl-CoA dehydrogenase [Thermus sp. RL]
gi|380451740|gb|EIA39342.1| glutaryl-CoA dehydrogenase [Thermus sp. RL]
Length = 385
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 190/348 (54%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+Y +DLLT EE+ ++ R +EKE P + ++WE+ FP H+IP+ L G T+
Sbjct: 3 DFYALEDLLTPEEKEIQKAARRFLEKEALPYIRDWWEEGVFPVHLIPRFAELGFLGPTLP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + E+ RVD+ +F+ V SSL M I GSEEQK+++LP LA+
Sbjct: 63 PEYGGAGVTSAAYGLIAYELERVDSGLRSFVSVQSSLVMYPIYAFGSEEQKREFLPKLAR 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ + LTEP GSD T ++EG W+L G K WI N A + +I+A++
Sbjct: 123 GEMVGAFGLTEPDGGSDPYGNMKTKARLEGNTWVLNGTKMWITNGNLAHIAIIWAKDEE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++V D PG ++++K+ LR +++L++V VP+ RLP S + L
Sbjct: 182 ERVLGFIVPTDTPGFQAQEVKHKMSLRASVTSELVLEEVRVPEALRLPKAESLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + K R FG P+A Q+ Q KL +ML + +L+
Sbjct: 242 TQARFGIAWGVLGALEAVYTEAVEFAKSRSTFGEPIAKKQLVQAKLAEMLADHTEGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L ++G + P SL K +A + L R++LGG+GI ++
Sbjct: 302 WRLARLKDEGKLKPAQVSLAKRQNVWKALKAARLARDILGGSGITLEY 349
>gi|357590619|ref|ZP_09129285.1| glutaryl-CoA dehydrogenase [Corynebacterium nuruki S6-4]
Length = 394
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 179/350 (51%), Gaps = 5/350 (1%)
Query: 48 YYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-HVIPKLGALRVAGGTIK 106
+ FD LL+ EE+ +R V + +E+AP + +++E A P + PKLG L V G +
Sbjct: 8 FVDFDSLLSDEERMLRDAVADFGARELAPHIGDWFENATLPAKELAPKLGELGVLGMHLD 67
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ VD+ +F+ V SLAM I GSEEQK+ YLP +A
Sbjct: 68 GYGCAGTSAVAYGLACMEVEAVDSGLRSFVSVQGSLAMFAIHHWGSEEQKENYLPKMAAG 127
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP GSD + + T A + W+L G K WI NS ADV V++A+
Sbjct: 128 EYIGCFGLTEPDAGSDPANMRTRAVRDGDEWVLNGTKMWITNSPVADVAVVWAKTVDRGD 187
Query: 227 ----INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
G++++K G +I K+ LR G+I+L +PD RLPGV+S +
Sbjct: 188 GKPGFAGFILEKGDAGFIAPEIHRKLSLRASVTGEIVLDDCRLPDSRRLPGVSSLRGPLT 247
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R + W +G + Y R+ F PL++FQ+ Q KL M + L
Sbjct: 248 CLDEARYGIIWGALGAARDALHTAIEYAGTRQVFDRPLSSFQLTQAKLADMTVELDKSTL 307
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ +L +L + G ++ S+GK T A E R +LG +GI ++
Sbjct: 308 LALQLGRLKDAGELSANQVSVGKLNSTRVALEITRQCRTILGASGITLEY 357
>gi|429220793|ref|YP_007182437.1| acyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM 19664]
gi|429131656|gb|AFZ68671.1| acyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM 19664]
Length = 386
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 186/355 (52%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI 105
DY + DLLT +E+ +R VR ++ E+ P + E+++ + P ++ KLG + + G +
Sbjct: 3 DYLKVSDLLTPDERLMRESVRSFIDAELMPHIEEWFDSGDVPTRDIMLKLGEMGLLGPNL 62
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YGC G S T + E+ R D+ + V SL M I GSEEQ++ YLP LA
Sbjct: 63 PEEYGCAGVSGTAYGAMMYELERCDSGLRSTASVQGSLVMYPIYAYGSEEQRRTYLPELA 122
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTE GSD A+ T A + ++L G K WI NS AD+ +++A++
Sbjct: 123 SGRMIGCFGLTESDGGSDPGAMRTRARRDGDHYVLNGSKMWITNSPVADIALVWAKDDAG 182
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++V D PG + KI+ K+ LR G+I+L+ VP LP V + L
Sbjct: 183 D-IRGFIVPTDTPGFSAPKIKRKMSLRASVTGEIVLEDCRVPASSMLPNVKGLKGPLGCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY+ Y +R FG P+A+ Q+ Q KLV ML +L+
Sbjct: 242 TQARYGIAWGALGALEAVYNATLTYTSDRTTFGKPIASRQLVQDKLVWMLSEHSKGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + G + SL K A + L REL GGNGI +++ V + ++
Sbjct: 302 WRLGTLKDSGQLNYAQVSLAKRNNVRVALQGARLARELHGGNGITTEYPVIRHML 356
>gi|448407361|ref|ZP_21573749.1| glutaryl-CoA dehydrogenase [Halosimplex carlsbadense 2-9-1]
gi|445675697|gb|ELZ28226.1| glutaryl-CoA dehydrogenase [Halosimplex carlsbadense 2-9-1]
Length = 389
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 184/350 (52%), Gaps = 4/350 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L+ EE+ VR RE +++ + P + +++E FP +I ++G L +
Sbjct: 3 DYVDLEGDLSEEERLVRDTAREFVDERVRPDIGDHFEAGTFPEDLIAEMGELGFYAPNLD 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
+ + E+ D+ + V +L M I GS Q++++LP LA
Sbjct: 63 HEATANLGERAYGLVMQELEAGDSGVRSMASVQGALVMYPIHAFGSAAQRERWLPDLAAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ + C+ LTEP +GS+ SA+ T A + + G ++L G K WI N+ ADV +++AR+ +
Sbjct: 123 SAVGCFGLTEPDHGSNPSAMETRAERADDGEGYVLHGSKTWITNAPIADVALVWARDRSA 182
Query: 225 N--QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ + G+LV+ D G+T I+ K+ +R G+I L +VP+ LP V+ +
Sbjct: 183 DGDPVRGFLVETDREGITTNHIDGKLSMRASVTGEIGLNGCYVPESAVLPDVSGMKGPLS 242
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + ++ Y +R+QFG P+A FQ+ Q+K+ +M I L
Sbjct: 243 CLTQARYGIAWGAVGAARDCFEAAREYATDREQFGGPIARFQLQQEKIAEMATEITTAQL 302
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ +RL L E+G + P S+ K + RET RE+LGGNGI +D+
Sbjct: 303 LAYRLADLKERGDLRPQQVSMAKRNNVSTWRETARTAREMLGGNGITTDY 352
>gi|170732135|ref|YP_001764082.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
cenocepacia MC0-3]
gi|169815377|gb|ACA89960.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
MC0-3]
Length = 395
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 191/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAQAYAQDKLAPRVTEAFRHERTDAAIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYALSGAKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|442318444|ref|YP_007358465.1| acyl-CoA dehydrogenase [Myxococcus stipitatus DSM 14675]
gi|441486086|gb|AGC42781.1| acyl-CoA dehydrogenase [Myxococcus stipitatus DSM 14675]
Length = 393
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 178/336 (52%), Gaps = 3/336 (0%)
Query: 56 TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSV 115
+ EE+AVR V +++E+ PI+ ++ FP H+IP L + V G ++GYGC G +
Sbjct: 17 SPEEKAVRDTVAAFVDREVLPIIGGHFRDGTFPRHLIPPLAEMGVLGANLQGYGCAGLNT 76
Query: 116 TGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALT 175
+ + E+ R D+ +F V SL M I GS+EQK ++LP++A+ I C+ LT
Sbjct: 77 VSYGLILQELERGDSGLRSFASVQGSLCMFPIHAYGSDEQKARFLPAMARGQVIGCFGLT 136
Query: 176 EPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYLVK 233
EP +GS+ + T A K +IL G K WI N ADV V++A+ + + G+LV+
Sbjct: 137 EPDFGSNPGGMRTRARKDGDDYILNGTKTWITNGAIADVAVVWAKTEDGGPESVRGFLVE 196
Query: 234 KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAW 293
K PG T I K LR ++ L+ V VP + LPGV + L +R+ +A+
Sbjct: 197 KGMPGFTTRDIPGKFSLRASITSELSLQDVRVPARNLLPGVKGLRGPLSCLNNARLGIAF 256
Query: 294 QPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE 352
G ++ ++ Y R F G +A++Q+ Q+KL ML +I LVG R+ +L +
Sbjct: 257 AVTGAAIACFEGAREYALSRTSFNGKSVASYQLTQEKLADMLQDIVKAQLVGLRVARLKD 316
Query: 353 KGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
+G +TP SL K A + + R + G NGI
Sbjct: 317 EGKVTPVMVSLAKRNNVKSALDIARVARSIYGANGI 352
>gi|89902828|ref|YP_525299.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
gi|89347565|gb|ABD71768.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
Length = 398
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 189/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + L+ +E+ VR + ++ P + E + K + V ++G L + G TI
Sbjct: 10 DPFLLTSQLSDDERMVREAAAAYCQDKLQPRVIEAFRKEQTDVAVFREMGELGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG S + E+ RVD+ + + V SSL ML I G+E QKQKYLP LA
Sbjct: 70 EAYGGPGLSYVAYGLIAREVERVDSGYRSMMSVQSSLVMLPIFDFGTEAQKQKYLPKLAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ + A KV GG+ L G K WI NS ADV V++A+ + +
Sbjct: 130 GEWIGCFGLTEPDHGSDPGSMASRAHKVAGGYKLSGAKMWISNSPIADVFVVWAKEVSES 189
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G+++ K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 190 GKVGPIRGFVLDKGMAGLSAPAIHGKVGLRASITGEIVMDGVFCPEENAFPEVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + HRY+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLDSARYGIAWGTLGAAEDCWLRAHRYVMDRKQFGRPLAANQLIQKKLADMQTEIALGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G + S+ K +A + L R+++GGNGI +F VA+
Sbjct: 310 QGCLRLGRMKDEGTASVEITSILKRNSCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|344170394|emb|CCA82805.1| dehydrogenase [blood disease bacterium R229]
Length = 397
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 197/358 (55%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDAQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGMLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE K+KYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEALKRKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV +++A+ +
Sbjct: 130 TGEWIGCFGLTEPDHGSDPASMVTRAKKVDGGYSLSGAKMWITNSPIADVFLVWAKLPDD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+QI G+++++ GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 NGEDQIRGFILERGWKGLSAPAIHGKVGLRTSITGEIVLDEVFVPEENLMPGVHGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K +A + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|338997237|ref|ZP_08635938.1| glutaryl-CoA dehydrogenase [Halomonas sp. TD01]
gi|338765834|gb|EGP20765.1| glutaryl-CoA dehydrogenase [Halomonas sp. TD01]
Length = 392
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 191/357 (53%), Gaps = 8/357 (2%)
Query: 48 YYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
++ +DD LT EE+ +R + ++ + P + + + F ++ ++G L +
Sbjct: 3 HFNWDDPLLLEHQLTDEERQIRDAAHDYCQENLQPRVLSAFREERFDREIMSEMGELGLL 62
Query: 102 GGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G T+ YG G + + E+ RVD+ + + V SSL M I GSEEQK KYL
Sbjct: 63 GATVAPEYGGSGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIEAYGSEEQKHKYL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA + C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS AD+ V++A+
Sbjct: 123 PKLASGEMVGCFGLTEPDHGSDPGSMITRAEKVDGGYRLTGAKMWITNSPIADIAVVWAK 182
Query: 221 NTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+ NQI G++V++ G + KIE K+ LR G+I+L FVP+E+ LP V+ +
Sbjct: 183 SAAHDNQIKGFIVERGTEGFSTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNVSGLKG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW IG + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 243 PFGCLNKARFGIAWGVIGTAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEITL 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++ +L + G +P SL K +A + + R++ GGNG+ ++ V +
Sbjct: 303 GLQAALQVGRLMDSGNWSPEMVSLIKRNNCGKALDIARVARDMHGGNGVSDEYGVIR 359
>gi|389752558|ref|ZP_10191207.1| glutaryl-CoA dehydrogenase [Rhodanobacter sp. 115]
gi|388432832|gb|EIL89818.1| glutaryl-CoA dehydrogenase [Rhodanobacter sp. 115]
Length = 390
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 177/347 (51%), Gaps = 5/347 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D Y LLT EE+ V+ V +++++ PI+ + +++A FP +IP++ +L + G TI
Sbjct: 10 DLYDVRSLLTDEERMVQDTVGRFVDEKVLPIIGDCFDQARFPTELIPEIASLGLLGATIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G S + E+ R D+ +F V SSL M I GSEEQKQ YLP +A
Sbjct: 70 EKYGCAGMSGVSYGLICQELERGDSGLRSFASVQSSLVMYPIYAYGSEEQKQAYLPKMAA 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD + + T A K G W++ G K WI N A V +++A+ T +
Sbjct: 130 GEIIGCFGLTEPHGGSDPANMKTNAKKDGGDWVINGAKMWITNGNLAHVAIVWAQ--TED 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V D G T +I K+ LR + V VPD +RLP V + L
Sbjct: 188 GIQGFIVPTDTKGFTAQQIHKKMSLRASVTSALFFDNVRVPDANRLPNVKGLKGPLGCLT 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W PIG + Y ER F PLAA Q Q KL M I L+
Sbjct: 248 QARYGITWGPIGAAQACLKEVLDYTAERILFDRPLAANQAVQLKLADMARRITTAQLLSL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALG-RELLGGNGILSD 391
+L +L + G M P SL K W R +A R++LGG GI ++
Sbjct: 308 QLGRLKDAGTMAPTQVSLAK-WNNCRMAIDIARQCRDILGGAGITTE 353
>gi|390576782|ref|ZP_10256830.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
terrae BS001]
gi|420250554|ref|ZP_14753765.1| acyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|389931274|gb|EIM93354.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
terrae BS001]
gi|398060632|gb|EJL52451.1| acyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 396
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 3/345 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT EE+ VR + ++AP + E + + + ++G L + G TI + YG PG
Sbjct: 19 LTEEERMVRDAAHAYAQDKLAPRVLEAFRNEKTDATIFREMGELGLLGPTIPEQYGGPGL 78
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ RVD+ + + V SSL M+ I GS+ QK KYLP LA I C+
Sbjct: 79 NYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKDKYLPKLATGEWIGCFG 138
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT--TNQINGYL 231
LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ T ++I G++
Sbjct: 139 LTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAQLETDGKDEIRGFI 198
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV + L +R +
Sbjct: 199 LEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPGVKGLRGPFTCLNSARYGI 258
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 259 AWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMK 318
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 319 DEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 363
>gi|388567797|ref|ZP_10154227.1| Glutaryl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
gi|388265126|gb|EIK90686.1| Glutaryl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
Length = 397
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 189/351 (53%), Gaps = 2/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L+ +E+AVR ++ + P + E + K + ++G L + G T+
Sbjct: 15 DPFHLDGQLSDDERAVRDAAHAYCQERLLPRVTEAFRKENTDPAIFREMGELGLLGATVP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 75 EQYGGAGLNYVCYGLVAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A++
Sbjct: 135 GEWIGCFGLTEPNHGSDPGSMVTRAKKVAGGYSLSGAKMWITNSPIADVFVVWAKDDE-G 193
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+++ K A GL+ I +K+GLR G+I++ VF P+E+ P V + L
Sbjct: 194 AIRGFILDKGAKGLSAPAIHSKVGLRASITGEIVMDNVFCPEENAFPEVRGLKGPFTCLN 253
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y +Y+ +R+QFG PLAA Q+ Q+KL ML I +
Sbjct: 254 SARYGIAWGALGAAEDCYFRARQYVLDRQQFGRPLAANQLIQKKLADMLTEISLGLQGCL 313
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R+++GGNGI +F VA+
Sbjct: 314 RLGRMKDEGTAAVEITSILKRNSCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|421889059|ref|ZP_16320120.1| dehydrogenase [Ralstonia solanacearum K60-1]
gi|378965595|emb|CCF96868.1| dehydrogenase [Ralstonia solanacearum K60-1]
Length = 397
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 194/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMVTRARKVDGGYSLTGAKMWITNSPIADVFVVWAKLPDE 189
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 190 NGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +R QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHIARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|421900247|ref|ZP_16330610.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
gi|206591453|emb|CAQ57065.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
Length = 397
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDTQLTDDEHMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLTGAKMWITNSPIADVFVVWAKLPDE 189
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 190 NGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ +R QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHIARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|25029333|ref|NP_739387.1| acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|259505665|ref|ZP_05748567.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|23494621|dbj|BAC19587.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
gi|259166747|gb|EEW51301.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
Length = 980
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 184/352 (52%), Gaps = 6/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D Q D L + EE++ +KVR+ +++EI P +AE++ FP +IP+LG L V G +K
Sbjct: 587 DITQMDSLFSVEEKSTALKVRQFVDREIRPNIAEWYNAGHFPREIIPELGKLGVLGMYLK 646
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
G+ CPG S +A E+ D+ TF+ V SLAM I GS +QK ++LP +A+
Sbjct: 647 GFDCPGRSAVEYGLAAQELEAGDSGLRTFVSVQGSLAMAAIHKHGSLDQKLEWLPRMARG 706
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GS+ +A+ T A + GG W+L G KRWIG + ADV +I+A+
Sbjct: 707 EAVGCFGLTEPTAGSNPAAMKTFARQEPGGDWVLNGTKRWIGLANIADVAIIWAQTEEFG 766
Query: 226 Q---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS--FQDT 280
+ G++V D PG + IE K+ +R +I L+ V +P LP ++ +
Sbjct: 767 DGRGVRGFVVPTDTPGFSAQVIEPKLSMRASVQCEITLEDVRLPYTAMLPKDSAVGLRGP 826
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + W +G + ++ Y R+QFG PL FQI Q KL M I
Sbjct: 827 FSCLNEARYGIVWGVLGAARDSFNSALEYSHHREQFGTPLTHFQITQTKLADMAVAINKG 886
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ + +L + +TP S GK T A + R +LGGNGI D+
Sbjct: 887 YHLAHHIGRLKDTTGVTPEMISTGKLDNTRIAIQIARDARAMLGGNGISMDY 938
>gi|445417531|ref|ZP_21434672.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
sp. WC-743]
gi|444761484|gb|ELW85890.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
sp. WC-743]
Length = 407
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 189/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT EE+ +R + ++ P + E + + + ++G L + G TI
Sbjct: 19 DPFLLEQQLTEEERMIRDAAYAYSQDKLMPRVLEQFRHEQTDISIFREMGELGLLGPTIP 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I GSE+QKQKYLP LA
Sbjct: 79 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGSEQQKQKYLPKLAS 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ +
Sbjct: 139 GEFIGCFGLTEPDHGSDPGSMITRAKKVAGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 198
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 199 GHVGEIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLRGPF 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 259 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLVQKKLADMQTEIALGL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 319 QIALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARVARDMMGGNGISDEFGVAR 373
>gi|289706687|ref|ZP_06503035.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
gi|289556607|gb|EFD49950.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
luteus SK58]
Length = 408
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 185/349 (53%), Gaps = 6/349 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L ++EE+AV +KVR +++ I P +A +++ A FP ++P+LG L V G
Sbjct: 16 ADVVGLDSLFSAEEKAVALKVRGFVDEHIRPHIARWYDDAVFPREIVPELGRLGVLGMPY 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+G+G PG S +A E+ D+ TF+ V SLAM I GSEEQK ++LP +
Sbjct: 76 EGHGMPGRSAVEYGLAAQELEAGDSGLRTFVSVQGSLAMGAIHKHGSEEQKAQWLPRMTT 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD +++ TTA + GG W+L+G KRWIG +T ADV +I+A+
Sbjct: 136 GEAVGCFGLTEPGAGSDPASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWAQTGEP 195
Query: 225 NQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS--FQD 279
+ G++V D PG I K+ +R +I L V +P LP ++ +
Sbjct: 196 GDGRGVRGFVVPTDTPGFRAEAITQKLSMRASVQCEIHLDGVRLPASAMLPADSAVGLKG 255
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+ L +R + W +G + +D Y +R+QFG PLA+ Q+ Q KL M I
Sbjct: 256 PFQCLNEARYGIIWGAMGAARDSFDAVLDYAMQRQQFGVPLASHQLTQAKLADMAVAIGK 315
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L+ ++ + + G +TP S GK A RE+LGGNGI
Sbjct: 316 GYLLAHQIGRAKDAGPLTPAMISAGKLDNCRVAIGIAREAREMLGGNGI 364
>gi|375013334|ref|YP_004990322.1| acyl-CoA dehydrogenase [Owenweeksia hongkongensis DSM 17368]
gi|359349258|gb|AEV33677.1| acyl-CoA dehydrogenase [Owenweeksia hongkongensis DSM 17368]
Length = 392
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 185/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ DYY D+LL+ E VR R+ ++K ++PI+ +Y ++AEFP ++ L + G
Sbjct: 8 SPDYYNLDELLSEEHILVRNATRDWVKKSVSPIIEDYAQRAEFPKQLLNGLAEVGAFGPY 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI R D+ + V SSL M I G+EEQ++KYLP L
Sbjct: 68 IPEEYGGAGLDQISYGLMMQEIERGDSGVRSTCSVQSSLVMYPIYTYGNEEQRKKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + + LTEP +GS+ + T + ++L G K WI N+ F DV V++A++ T
Sbjct: 128 ASGKFLGSFGLTEPNFGSNPGGMITNFKDMGDHYLLNGAKMWISNAPFCDVAVVWAKDET 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G T + NK LR G+++ V VP E+ LP +
Sbjct: 188 -GRIHGLIVERGMEGFTTPETHNKWSLRASATGELVFDNVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGALGAAMDCYDTALRYSKERIQFGKPIGGFQLQQKKLAEMITEITKAQLM 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + T S+ K A R++LGG GI ++ + + +M
Sbjct: 307 VWRLGVLKNEKKATSAQISMAKRNSVEIALNICREARQMLGGMGITGEYSIMRHMM 362
>gi|302546539|ref|ZP_07298881.1| putative glutaryl-CoA dehydrogenase [Streptomyces hygroscopicus
ATCC 53653]
gi|302464157|gb|EFL27250.1| putative glutaryl-CoA dehydrogenase [Streptomyces himastatinicus
ATCC 53653]
Length = 390
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 184/359 (51%), Gaps = 5/359 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGA 97
PP D DDLL E+ AVR VR+ + P +A+++E+ E P + +LG+
Sbjct: 1 MPPFDPDDPLGIDDLLEPEDLAVRTTVRQWAADRVLPHIADWYERGELPGIRELTRELGS 60
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ
Sbjct: 61 LGALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQ 120
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A I C+ LTEP +GSD + + T A + W+L G+K WI N + A V V+
Sbjct: 121 QWLPRMASGEVIGCFGLTEPDHGSDPAGMRTYAKRDGTDWVLTGRKMWITNGSVAGVAVV 180
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V DAPG + +I++K LR +++L +V +P + LP V
Sbjct: 181 WAH--TDDGIRGFVVPTDAPGFSAPEIKHKWSLRASVTSELVLDEVRLPADAVLPEVTGL 238
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y + R+QFG P+ FQ+ Q KL M +
Sbjct: 239 RGPLSCLSHARYGIIWGALGAARASFTSALEYARTREQFGRPIGGFQLTQAKLADMAVEL 298
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L+ L + + G + P S GK A E R +LG NGI ++ V +
Sbjct: 299 HKGVLLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVMR 357
>gi|290462991|gb|ADD24543.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
gi|290561415|gb|ADD38108.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
Length = 416
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 184/354 (51%), Gaps = 3/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT EE +R VR ++++ P + F ++ ++G + + G TI+
Sbjct: 31 DALNLEVSLTEEEIGIRDSVRSYCQEQLLPRVLMANRNEVFHREIMSEMGEMGILGPTIQ 90
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD+S + + V SSL M I+ G+EEQK KY+P LA
Sbjct: 91 GYGCAGTSTVAYGLIAREVERVDSSYRSAMSVQSSLVMYPISDFGTEEQKNKYIPRLATG 150
Query: 167 NTIACWALTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD S++ T A K +G W + G K WI NS ADV +I+A T +
Sbjct: 151 EIVGCFGLTEPNHGSDPSSMETKAVKNPDGSWTINGSKNWITNSPIADVFMIWA--ATED 208
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+L++K GLT KIE K LR G I ++ V V DE RLPGV + L
Sbjct: 209 GIQGFLLEKGMEGLTAPKIEGKFSLRASTTGMIFMEDVVVGDEQRLPGVKGLRGPFSCLN 268
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + +Y +R QF PLA Q+ Q+KL L I +
Sbjct: 269 SARFGIAWGVLGAAEFCLGAARQYTLDRYQFKKPLAQNQLIQKKLADALTEITLGLHACL 328
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L +L + G + P S+ K ++ + R++LGGNGI ++ + + +M
Sbjct: 329 HLGRLKDSGKLVPEMISILKRNNCGKSLDIARNCRDMLGGNGISDEYHIIRHVM 382
>gi|443628679|ref|ZP_21113021.1| putative Acyl CoA dehydrogenase [Streptomyces viridochromogenes
Tue57]
gi|443337806|gb|ELS52106.1| putative Acyl CoA dehydrogenase [Streptomyces viridochromogenes
Tue57]
Length = 396
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 5/364 (1%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
+ +SK PP +D DDLL E+ AVR VR+ + P +A+++E+ E P +
Sbjct: 2 SASSKLPPFDPADPLGIDDLLEPEDLAVRDTVRQWAADRVVPYVADWYERGELPGIRELA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LGA+ G ++ GYGC G S +A E+ D+ + + V SLAM + GS
Sbjct: 62 RELGAIGALGMSLSGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
E QKQ++LP +A I C+ LTEP +GSD +++ T A K W+L G+K WI N + A
Sbjct: 122 EAQKQQWLPRMASGEVIGCFGLTEPDHGSDPASMRTYAKKDGSDWVLNGRKMWITNGSVA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V V++A+ T I G++V D+ G + +I++K+ LR +++L V +P + LP
Sbjct: 182 GVAVVWAQ--TEEGIRGFVVPADSDGFSAPEIKHKLSLRASVTSELVLDDVRLPADAVLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
V + L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL
Sbjct: 240 EVVGLKGPLSCLSHARYGIVWGAMGAARSCFEAALDYAKSREQFGRPIGGFQLTQAKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A + R +LG NGI ++
Sbjct: 300 MALELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTVLGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVMR 363
>gi|163793207|ref|ZP_02187183.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
gi|159181853|gb|EDP66365.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
Length = 410
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 187/345 (54%), Gaps = 2/345 (0%)
Query: 56 TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHS 114
+ +E+ VR R+ ++++ P + E + F ++ ++G L G TI + YGC G +
Sbjct: 35 SEDERMVRDAARDYCQEKLLPRVREAFRNEVFHRDIMNEMGELGFLGSTIGEEYGCAGVN 94
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
+ E+ RVD+ + + V SSL M I GSEEQ++KYLP LA + C+ L
Sbjct: 95 YVCYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRRKYLPKLATGEWVGCFGL 154
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKK 234
TEP +GSD + T A K +GG+++ G K WI NS ADV V++A+ T I G++++K
Sbjct: 155 TEPDHGSDPGGMKTRAVKADGGYLVSGAKMWITNSPIADVFVVWAK-TDDGVIRGFILEK 213
Query: 235 DAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQ 294
GL+ KIE K LR G+I++ VFVP+E+ LP V L +R ++W
Sbjct: 214 GMKGLSAPKIEGKFSLRASITGEIVMDGVFVPEENLLPNVKGLSGPFGCLNKARYGISWG 273
Query: 295 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354
+G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +L ++G
Sbjct: 274 ALGAAEACWHASRQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQSCLRLGRLMDEG 333
Query: 355 AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
P SL K ++ + + R++ GGNG+ ++ V + +M
Sbjct: 334 RAAPEAISLCKRNSCGKSLDIARMARDMHGGNGVSDEYHVIRHVM 378
>gi|154248630|ref|YP_001419588.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
autotrophicus Py2]
gi|154162715|gb|ABS69931.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
Py2]
Length = 397
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 191/353 (54%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + + LT +E+ VR R+ ++++ P + + + F ++ ++G L + G TI
Sbjct: 12 TDPFDLNGQLTEDERLVRDTARDYAQEKLLPRVTSAYLEERFDREIMNEMGELGLLGPTI 71
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G +A E+ RVD+ + + V SSL M I G+E Q+QKYLP LA
Sbjct: 72 PAEYGGAGLGYVSYGLAAREVERVDSGYRSAMSVQSSLVMHPIYAYGTEAQRQKYLPKLA 131
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP GSD + + T A K++GG+ L G K WI NS AD+ V++A++
Sbjct: 132 TGEWIGCFGLTEPDAGSDPAGMRTRAEKIDGGYRLNGAKMWITNSPIADLAVVWAKSAAH 191
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N I G++V++ G + KIE K+ LR G+I+L+ V +P+E+ LP V+
Sbjct: 192 DNAIRGFVVERGMKGFSTPKIEGKLSLRASITGEIVLEDVEIPEENLLPNVSGLAGPFGC 251
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W +G + + +Y +RKQFG PLAA Q+ Q+KL M +I +
Sbjct: 252 LNRARYGIGWGAMGAAEACFAQARQYTLDRKQFGKPLAATQLVQKKLADMATDIAFGLQA 311
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L+E+G + P S K +A + R++ GGNGI ++F V +
Sbjct: 312 CLRVGRLFEEGRLPPETISFIKRNNCGKALDIARTARDMHGGNGISAEFHVIR 364
>gi|297566910|ref|YP_003685882.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
silvanus DSM 9946]
gi|296851359|gb|ADH64374.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
9946]
Length = 386
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 3/348 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D+ +LLT EE+ ++ R +E E P ++ +WE EFP H+IPK + G TI
Sbjct: 3 DFLNVQELLTPEEREIQRAARRFLEAEALPYISGWWEAGEFPRHLIPKFAEMGFLGPTIP 62
Query: 107 -GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G S + E+ R+DA +F V SSL M I GSEEQK+++LP LA+
Sbjct: 63 VEYGGGGASSATYGVMAYELERIDAGLRSFASVQSSLVMYPIYTYGSEEQKREFLPKLAK 122
Query: 166 LNTIACWALTEPAYGSDASA-LNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD A + T A + ++L G K WI N A + V++A++
Sbjct: 123 GEMIGCFGLTEPDGGSDPDANMKTRAYRDGDHYVLSGTKMWITNGNLAHIAVVWAKDEA- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V D G ++++K+ LR +++L++V +P LP + L
Sbjct: 182 GVVRGFIVPTDTQGFKANEVKHKMSLRASVTSELVLQEVRIPASLMLPKAEGLKAPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY + + R FG P+A+ Q+ Q+KLV+M + +L+
Sbjct: 242 TQARFGIAWGALGALEAVYSEALAFAQSRITFGKPIASRQLVQEKLVRMAADHTKGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL +L + G + P SLGK A RE+LGG+GI ++
Sbjct: 302 WRLAQLKDAGKLRPAQVSLGKRDNVRSALHAARSAREILGGSGITLEY 349
>gi|254246209|ref|ZP_04939530.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
gi|124870985|gb|EAY62701.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
Length = 395
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 190/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAQAYARDKLAPRVTEAFRHERTDAAIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYALSGAKMWITNSPIADVFVVWAKLQEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|107021888|ref|YP_620215.1| acyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|116688836|ref|YP_834459.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|105892077|gb|ABF75242.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
1054]
gi|116646925|gb|ABK07566.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
HI2424]
Length = 395
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 191/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAQAYAQDKLAPRVTEAFRHERTDAVIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGGYALSGAKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|326780207|ref|ZP_08239472.1| Glutaryl-CoA dehydrogenase [Streptomyces griseus XylebKG-1]
gi|326660540|gb|EGE45386.1| Glutaryl-CoA dehydrogenase [Streptomyces griseus XylebKG-1]
Length = 406
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 187/369 (50%), Gaps = 6/369 (1%)
Query: 34 QATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FH 90
++ SK PP ASD DDLL ++ A+R VR + P +AE++EK E P
Sbjct: 5 ESAKPSKLPPFDASDPLGIDDLLGPDDLAIRDTVRTWAADRVLPHIAEWYEKGELPGIRE 64
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
+ +LGAL G ++ GYGC G S +A E+ D+ + + V SLAM I
Sbjct: 65 LARELGALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRF 124
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
GSEEQK ++LP++A I C+ LTEP +GSD + + T A + WIL G+K WI N +
Sbjct: 125 GSEEQKLRWLPAMASGEIIGCFGLTEPDHGSDPAGMRTYAKRDGEDWILTGRKMWITNGS 184
Query: 211 FADVLVIFAR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
A V V++A+ I G++V D PG + +I +K LR ++++ +V +P
Sbjct: 185 VAGVAVVWAQTDEGADGRGIRGFVVPTDTPGFSAPEIHHKWSLRASVTSELVMDEVRLPA 244
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ LP + + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q
Sbjct: 245 DAVLPDASGLRGPLSCLSHARYGIVWGSMGAARASFESALDYARGREQFGRPIGGFQLTQ 304
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
KL M + IL+ L + + G + P S GK A E R +LG NG
Sbjct: 305 AKLADMAVELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICRTSRTILGANG 364
Query: 388 ILSDFLVAK 396
I ++ V +
Sbjct: 365 ISLEYPVMR 373
>gi|391345749|ref|XP_003747146.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like
[Metaseiulus occidentalis]
Length = 423
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 193/361 (53%), Gaps = 15/361 (4%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D + D+ L+ EE+ VR R ++++ P +MA E+ F ++ + G L V G T
Sbjct: 38 DPFLLDEQLSDEEKMVRDSFRSYCQEKLFPRVLMANRLER--FDREIMNEFGELGVLGST 95
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGC G + + E+ RVD+ + + V SSL ML I+ GSEEQKQKYLP LA
Sbjct: 96 IQGYGCAGTNYVTYGLIAREVERVDSGYRSAMSVQSSLVMLPISTFGSEEQKQKYLPKLA 155
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNT 222
+ + C+ LTEP +GS+ + + T AT G + L G K WI NS ADV V++A++
Sbjct: 156 KGELVGCFGLTEPDFGSNPAGMETKATYNPSGKTYTLRGSKTWITNSPIADVFVVWAKDD 215
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ + G++++K GL+ KIE K LR G I++ V VP+ LP V +
Sbjct: 216 AGD-VRGFILEKGMKGLSAPKIEGKFSLRASMTGMIMMDDVEVPESAMLPNVKGLKGPFT 274
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + ++ +Y ER QF PLA Q+ Q+K ML I
Sbjct: 275 CLNNARYGIAWGALGAAEFCFEQARQYTIERIQFKDPLAKNQLIQKKFADMLTEIH---- 330
Query: 343 VGWRLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+G++ C +L ++ + P S+ K +A + R++LGGNGI ++ + + +
Sbjct: 331 IGYQACLRAGRLMDEKKLQPDLISIIKRNSCGKALDIARTSRDILGGNGICDEYHIIRHV 390
Query: 399 M 399
M
Sbjct: 391 M 391
>gi|404496932|ref|YP_006721038.1| glutaryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
gi|418067988|ref|ZP_12705313.1| acyl-CoA dehydrogenase domain protein [Geobacter metallireducens
RCH3]
gi|78194537|gb|ABB32304.1| glutaryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
gi|373557822|gb|EHP84205.1| acyl-CoA dehydrogenase domain protein [Geobacter metallireducens
RCH3]
Length = 392
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 184/354 (51%), Gaps = 5/354 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+DY F LLT EE+ VR R+ + E+ PI+ E+ FP H+IPK+G L G +
Sbjct: 8 TDYMGFQGLLTDEEKLVRETARKFVNDEVLPIIEEHALNETFPSHLIPKMGELGFYGPNL 67
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YGC G S + + E+ R D+ +F V SL M I GSE QK+ +LP LA
Sbjct: 68 PEKYGCAGLSNVAYGLLMYELERGDSGLRSFASVQGSLVMYPIYAYGSEAQKEYWLPKLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
I C+ LTEP +GS+ + + T A + G W + G K WI N + ADV V++AR T
Sbjct: 128 AGEKIGCFGLTEPDFGSNPAGMRTNAVREANGKWRINGSKMWITNGSVADVAVVWAR--T 185
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR-LPGVNSFQDTSK 282
+ + G+LV+K PG + K+ K LR +++ + V V +E LP V +
Sbjct: 186 DDGVRGFLVEKGTPGFSAPKMHGKWSLRASVTSELVFEDVIVDEEKSLLPNVKGLKGPLG 245
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + Y Y R QF P+A++Q+ Q+KL +M+ I L
Sbjct: 246 CLTQARYGIAWGALGAADACYQAALEYALSRIQFDKPIASYQLQQRKLAEMVTEITKGQL 305
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L +L ++G +P S+ K A R +LG NGI+S++ + +
Sbjct: 306 LVMQLGRLKDQGNYSPAQVSMAKMNNVHVAINICRTARTILGANGIMSEYPIMR 359
>gi|172059771|ref|YP_001807423.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
ambifaria MC40-6]
gi|171992288|gb|ACB63207.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
MC40-6]
Length = 395
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 188/349 (53%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + ++AP + E + + ++G + + G TI + YG
Sbjct: 14 LDQQLTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDAEIFREMGEIGLLGPTIPEEYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA I
Sbjct: 74 GPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLATGEWI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD + T A KV GG+ L G K WI NS ADV V++A+ + I
Sbjct: 134 GCFGLTEPNHGSDPGGMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEEDGKDAI 193
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVP+E+ LP V+ + L +
Sbjct: 194 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLLPNVSGLRGPFTCLNSA 253
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL
Sbjct: 254 RYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 313
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 314 GRMKDEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|339326821|ref|YP_004686514.1| acyl-CoA dehydrogenase [Cupriavidus necator N-1]
gi|338166978|gb|AEI78033.1| acyl-CoA dehydrogenase MmgC [Cupriavidus necator N-1]
Length = 397
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 196/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT+EE+ VR + ++ P + + + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTAEERMVRDAAAAYSQDKLMPRVLQSFRNEKTDIEIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGTEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVDGGYELTGAKMWITNSPIADVFVVWAKLQGD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 NGKDEIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVFVPEENIMPGVSGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|229488410|ref|ZP_04382276.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
gi|453071589|ref|ZP_21974729.1| glutaryl-CoA dehydrogenase [Rhodococcus qingshengii BKS 20-40]
gi|229323914|gb|EEN89669.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
gi|452758854|gb|EME17235.1| glutaryl-CoA dehydrogenase [Rhodococcus qingshengii BKS 20-40]
Length = 390
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 187/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P S+ + D LL +EE A+R VR+ ++ I P + E++E A P + K LGAL V
Sbjct: 4 PQSLSELFAIDTLLDAEEIAIRDTVRKMVDDRIRPHVGEWFEAAALPARELAKELGALGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSEEQK+++L
Sbjct: 64 LGMHLEGYGCAGMSATAYGLACQELEAVDSGIRSLVSVQGSLAMFAIHHNGSEEQKEEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + T A + WIL G K WI N + ADV V++AR
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPGGMRTNAKRDGDDWILNGTKMWITNGSIADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + + G++V D PG + +I+NK+ LR +++L+ V +P LP
Sbjct: 184 --TDDGVRGFVVPTDTPGFSAPEIKNKMSLRASVTSELVLEDVRLPASAMLPKARGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++RK F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLETAISYARDRKVFDKSLAAYQITQAKIADMAVELGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ L +L + G + P S GK RE + + RE +LG NGI ++ V +
Sbjct: 302 QLLAIHLGRLKDAGTVRPEQVSTGK---LNNVREAIKIARECRTILGANGITLEYPVIR 357
>gi|400975530|ref|ZP_10802761.1| acyl-CoA dehydrogenase-like protein [Salinibacterium sp. PAMC
21357]
Length = 389
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 177/346 (51%), Gaps = 2/346 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
D LLT EE+ + K R + ++P + + +E A F + +LGAL + G + GYG
Sbjct: 13 LDALLTEEERGWQAKARTFAAERVSPTIEKDFEDAVFRREFVAELGALGMLGMHLTGYGT 72
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G + T + E+ D + TF+ V SLAM +A GSEEQKQ++LP+LA +
Sbjct: 73 AGANATSYGLVCYELEAADTAWRTFVSVQGSLAMSALAYFGSEEQKQQWLPALAAGTSTG 132
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 230
C+ LTEP GSD + + T ATK W+L G KRWIG + ADV +I+A+ T + + G+
Sbjct: 133 CFGLTEPTGGSDPAGMLTRATKSGDDWVLTGSKRWIGLGSVADVAIIWAQ--TDDGVRGF 190
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
+V D PG IE+K LR D+ V +P +LPG + + L +R
Sbjct: 191 VVPTDTPGFRAENIESKHSLRASIQCDLFFDDVRLPASAQLPGASGLSAPFRCLNDARYG 250
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
+ W +G + D+ K R FG P+ A Q+ Q KL + +L+ L KL
Sbjct: 251 IVWGVMGAARDCLDVAIERSKTRLAFGKPIGAMQLTQLKLADSFVEYEKGMLLSLHLAKL 310
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ GA+TP S+GK A + R +L G+GI DF V +
Sbjct: 311 KDAGALTPEQISVGKLNNVREAIRIASTSRSILAGDGITGDFSVMR 356
>gi|300704832|ref|YP_003746435.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
gi|299072496|emb|CBJ43846.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
Length = 397
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLTGAKMWITNSPIADVFVVWAKLPDE 189
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 190 NGDDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y+ +R QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|226944579|ref|YP_002799652.1| glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
gi|226719506|gb|ACO78677.1| Glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
Length = 395
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 2/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT E+ VR R ++++AP + E + + + ++G L + G TI
Sbjct: 12 DPLMLDQQLTETERMVRDAARAYCQEKLAPRIQEAFRQERTDREIFAEMGELGLLGATIP 71
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + + V SSL ML I ++ QK+KYLP LA
Sbjct: 72 EAYGGAGMNHVCYGLIAREVERVDSGYRSMMSVQSSLVMLPINEFATQAQKEKYLPRLAS 131
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD + T A K +GG+ L G K WI NS ADV V++A+ T
Sbjct: 132 GEWVGCFGLTEPNFGSDPGGMATRARKADGGYRLSGSKTWITNSPIADVFVVWAK-TDDG 190
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V+ + L
Sbjct: 191 RIRGFILEKGWQGLSAPAIHGKVGLRASITGEIVMDEVFVPEENMFPEVSGLKGPFTCLN 250
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y+ +Y +R QFG PLAA Q+ Q+KL ML I +
Sbjct: 251 SARYGIAWGALGAAEFCYETARQYTLDRAQFGRPLAANQLIQKKLADMLTEIALGLQACL 310
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 311 RVGRLKDEGNAPVEATSIIKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 361
>gi|359785017|ref|ZP_09288178.1| glutaryl-CoA dehydrogenase [Halomonas sp. GFAJ-1]
gi|359297712|gb|EHK61939.1| glutaryl-CoA dehydrogenase [Halomonas sp. GFAJ-1]
Length = 392
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 2/348 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYG 109
++ LT EE+ +R + ++ + P + + + F ++ ++G L + G T+ YG
Sbjct: 12 LENQLTDEERQIRDAAHDYCQENLQPRVLTAFREERFDREIMSEMGELGLLGATVSPEYG 71
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M I GSEEQK KYLP LA +
Sbjct: 72 GAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIEAFGSEEQKHKYLPKLASGEMV 131
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-TNQIN 228
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS AD+ V++A++ NQI
Sbjct: 132 GCFGLTEPDHGSDPGSMITRAEKVDGGYRLTGAKMWITNSPIADIAVVWAKSAAHDNQIK 191
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSR 288
G++V++ G T KIE K+ LR G+I+L FVP+E+ LP V+ + L +R
Sbjct: 192 GFIVERGTEGFTTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNVSGLKGPFGCLNKAR 251
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I + ++
Sbjct: 252 YGIAWGVMGTAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQAALQVG 311
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L + G P SL K +A + + R++ GGNG+ ++ V +
Sbjct: 312 RLMDSGNWAPEMISLIKRNNCGKALDIARVARDMHGGNGVSDEYGVIR 359
>gi|402850016|ref|ZP_10898232.1| Glutaryl-CoA dehydrogenase [Rhodovulum sp. PH10]
gi|402499690|gb|EJW11386.1| Glutaryl-CoA dehydrogenase [Rhodovulum sp. PH10]
Length = 423
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + F++ L+ EE+ +R R + ++AP + + + + + + ++G L + G T+
Sbjct: 39 DPFLFEEQLSEEERLIRDSARAYAQSKLAPRVRQAFREEKTDPAIFSEMGELGLLGVTLS 98
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + EI RVD+ + + V +SL M I GSEEQ++KYLP LA
Sbjct: 99 EKYGGTGAGYVSYGLVAREIERVDSGYRSMMSVQASLVMYPIFAYGSEEQREKYLPKLAS 158
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-T 224
I C+ LTEP GSD + + T A K++GG+ L G K WI NS ADV V++A++
Sbjct: 159 GEWIGCFGLTEPDAGSDPAGMKTRAEKIDGGYRLTGSKTWISNSPIADVFVVWAKSAAHG 218
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G++++K GL+ KIE K+ LR G+I+L V VP++ LP L
Sbjct: 219 GKIRGFVLEKGMKGLSAPKIEGKLSLRASVTGEIVLDGVEVPEDALLPNAEGLAGPFGCL 278
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y +RKQFG PLA Q+ Q+KL ML I +
Sbjct: 279 NRARYGIAWGTLGAAEACWHAARQYGLDRKQFGRPLAQTQLFQKKLTDMLTEITLGLQAV 338
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L+E G M P S+ K +A E + R++ GGNGI +F V +
Sbjct: 339 LRVGRLFEGGKMAPEMISVIKRNNCGKALEIARMARDMHGGNGISDEFPVIR 390
>gi|386839287|ref|YP_006244345.1| acyl CoA dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374099588|gb|AEY88472.1| acyl CoA dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792579|gb|AGF62628.1| acyl CoA dehydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 396
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 188/364 (51%), Gaps = 5/364 (1%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
+ ++K PP A+D DDLL E+ AVR VR + P +A+++EK E P +
Sbjct: 2 SASAKLPPFDAADPLGIDDLLEPEDLAVRDTVRAWAADRVLPYVADWYEKGELPGIRDLA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LG++ G ++ GYGC G S +A E+ D+ + + V SLAM I GS
Sbjct: 62 RELGSIGALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQK ++LP +A I C+ LTEP +GSD +++ T A + W+L G+K WI N + A
Sbjct: 122 EEQKLQWLPRMAAGEVIGCFGLTEPDHGSDPASMRTHAKRDGDDWVLRGRKMWITNGSVA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V V++A+ T I G++V D+PG + +I++K LR +++L V +P LP
Sbjct: 182 GVAVVWAQ--TEEGIRGFVVPTDSPGFSAPEIKHKWSLRASVTSELVLDDVRLPATAVLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
V + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 240 QVTGLRGPLSCLSHARYGIVWGAMGAARSSFEAALDYARSREQFGRPIGGFQLTQAKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 300 MAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVMR 363
>gi|424891393|ref|ZP_18314976.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393185388|gb|EJC85424.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 395
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 TDPFRLVEQLTDEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 PPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIETFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 IGEWIGCFGLTEPDHGSDPGSMATRARKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVPDE+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDAVFVPDENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLDRKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|83748989|ref|ZP_00945997.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
gi|83724327|gb|EAP71497.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
Length = 419
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 32 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 91
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 92 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 151
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 152 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLTGAKMWITNSPIADVFVVWAKLPDE 211
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 212 NGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 271
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ R QFG PLAA Q+ Q+KL M I +
Sbjct: 272 TCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAANQLIQKKLADMQTEITLGL 331
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 332 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 389
>gi|207744057|ref|YP_002260449.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
gi|206595459|emb|CAQ62386.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
Length = 397
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT +E+ VR + ++ P + E + + + ++GAL + G TI
Sbjct: 10 ADPLLLDTQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKTDVAIFREMGALGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPRLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLTGAKMWITNSPIADVFVVWAKLPDE 189
Query: 225 N---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
N I G++++K GL+ I K+GLR G+I+L VFVP+E+ +PGV +
Sbjct: 190 NGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVFVPEENLMPGVRGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + + +Y+ R QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAANQLIQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVV 367
>gi|239918776|ref|YP_002958334.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|281414998|ref|ZP_06246740.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239839983|gb|ACS31780.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 408
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 185/349 (53%), Gaps = 6/349 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L ++EE+AV ++VR +++ I P +A +++ A FP ++P+LG L V G
Sbjct: 16 ADVVGLDSLFSAEEKAVALQVRGFVDEHIRPHIARWYDDAVFPREIVPELGRLGVLGMPY 75
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+G+G PG S +A E+ D+ TF+ V SLAM I GSEEQK ++LP +
Sbjct: 76 EGHGMPGRSAVEYGLAAQELEAGDSGLRTFVSVQGSLAMGAIHKHGSEEQKAQWLPRMTI 135
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD +++ TTA + GG W+L+G KRWIG +T ADV +I+A+
Sbjct: 136 GEAVGCFGLTEPGAGSDPASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWAQTGEP 195
Query: 225 NQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS--FQD 279
+ G++V D PG I K+ +R +I L V +P LP ++ +
Sbjct: 196 GDGRGVRGFVVPTDTPGFRAEAITQKLSMRASVQCEIHLDGVRLPASAMLPADSAVGLKG 255
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+ L +R + W +G + +D Y ER+QFG PLA+ Q+ Q KL M I
Sbjct: 256 PFQCLNEARYGIIWGAMGAARDSFDAVLDYAMERQQFGVPLASHQLTQAKLADMAVAIGK 315
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L+ ++ + + G +TP S GK A RE+LGGNGI
Sbjct: 316 GYLLAHQIGRAKDAGPLTPAMISAGKLDNCRVAIGIAREAREMLGGNGI 364
>gi|115350748|ref|YP_772587.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
ambifaria AMMD]
gi|115280736|gb|ABI86253.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
Length = 395
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDIEIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD + T A KV GG+ + G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGGYSVSGAKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ LP V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLLPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|239813137|ref|YP_002942047.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
paradoxus S110]
gi|239799714|gb|ACS16781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
Length = 399
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT EE+ +R ++ +AP + E + E + ++GAL + G TI
Sbjct: 11 DPLLLDQQLTDEERMIRDAANAYCQERLAPRVIEGFRSGETDPAIFREMGALGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ RVD+ + V SSL M+ I G+E QKQK+LP LA
Sbjct: 71 EQYGGPGLNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGTEAQKQKFLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT--- 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 131 GEWIGCFGLTEPDHGSDPGSMVTRAKKVPGGYSLSGAKMWISNSPIADVFVVWAKEVSES 190
Query: 223 -TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T I G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 191 GTVGPIRGFVLEKGTKGLSAPAIHGKVGLRASITGEIVMDGVFCPEENAFPEVQGLKGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGISWGALGAAEDCWHRARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G + S+ K +A + L R+++GGNGI +F VA+
Sbjct: 311 QGSLRLGRMKDEGTASVEITSIMKRNNCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|320335659|ref|YP_004172370.1| glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
gi|319756948|gb|ADV68705.1| Glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
Length = 386
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 180/355 (50%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAG-GT 104
DY DLL E++A R VR + E+ P + +W+ P ++ + GAL + G T
Sbjct: 3 DYLHALDLLAPEDRAARASVRAFADAELLPHIGGWWDAGHAPTRDLMQRFGALGLLGPKT 62
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + + E+ R D+ + V SL M I GS+ Q+++YLP LA
Sbjct: 63 PEAYGGAGASSAAYGVMMYELERADSGLRSMASVQGSLVMYPILAYGSDAQRRRYLPELA 122
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTE GSD A+ T A + ++L G K WI NS ADV +++A++
Sbjct: 123 AGRLIGCFGLTEADGGSDPGAMRTRARRDGQHYVLNGTKMWITNSPLADVALVWAKDDD- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+LV +D PGL IE K+ LR G+++L V VP E LP + L
Sbjct: 182 GHVRGFLVDRDTPGLHTPTIERKMSLRASTTGEVVLDDVRVPAEQMLPDARGLKGPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G VY Y ER FG PLAA Q+ Q KLV ML +L+
Sbjct: 242 TQARYGIAWGALGALEAVYAATLAYTTERTTFGRPLAARQLVQDKLVGMLTAHTTGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L + GA+TP SLGK A REL GGNGI +++ V + ++
Sbjct: 302 ARLGQLADAGALTPAQVSLGKRTNVRAALNAARAARELHGGNGITTEYPVIRHML 356
>gi|299533160|ref|ZP_07046544.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
gi|298718690|gb|EFI59663.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
Length = 396
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+ +R RE + ++ P + + + ++G L + G TI
Sbjct: 8 DDCFQLDQQLTEDERMIRDAAREYCQDKLKPRVQAMFRNESVDVSIFREMGELGLLGPTI 67
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E QK KYLP LA
Sbjct: 68 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---- 220
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 128 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVSE 187
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ T QI G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 188 DGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPDVRGLKGP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 248 FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R++LGGNGI +F VA+
Sbjct: 308 LQAALRVGRMKDEHQNVIEITSLVKRNNCGKSLDIARMARDMLGGNGISDEFGVAR 363
>gi|182439543|ref|YP_001827262.1| acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178468059|dbj|BAG22579.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 414
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 187/369 (50%), Gaps = 6/369 (1%)
Query: 34 QATPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FH 90
++ SK PP ASD DDLL ++ A+R VR + P +AE++EK E P
Sbjct: 13 ESAKPSKLPPFDASDPLGIDDLLGPDDLAIRDTVRTWAADRVLPHIAEWYEKGELPGIRG 72
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
+ +LGAL G ++ GYGC G S +A E+ D+ + + V SLAM I
Sbjct: 73 LARELGALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRF 132
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
GSEEQK ++LP++A I C+ LTEP +GSD + + T A + WIL G+K WI N +
Sbjct: 133 GSEEQKLRWLPAMASGEIIGCFGLTEPDHGSDPAGMRTYAKRDGEDWILTGRKMWITNGS 192
Query: 211 FADVLVIFAR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
A V V++A+ I G++V D PG + +I +K LR ++++ +V +P
Sbjct: 193 VAGVAVVWAQTDEGADGRGIRGFVVPTDTPGFSAPEIHHKWSLRASVTSELVMDEVRLPA 252
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ LP + + L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q
Sbjct: 253 DAVLPDASGLRGPLSCLSHARYGIVWGSMGAARASFESALDYARGREQFGRPIGGFQLTQ 312
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
KL M + IL+ L + + G + P S GK A E R +LG NG
Sbjct: 313 AKLADMAVELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICRTSRTILGANG 372
Query: 388 ILSDFLVAK 396
I ++ V +
Sbjct: 373 ISLEYPVMR 381
>gi|264679746|ref|YP_003279655.1| acyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262210261|gb|ACY34359.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
Length = 397
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+ +R RE + ++ P + + + ++G L + G TI
Sbjct: 8 DDCFQLDQQLTEDERMIRDAAREYCQDKLKPRVQAMFRNESVDVSIFREMGELGLLGPTI 67
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E QK KYLP LA
Sbjct: 68 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---- 220
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 128 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVSE 187
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ T QI G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 188 DGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPDVRGLKGP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 248 FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R++LGGNGI +F VA+
Sbjct: 308 LQAALRVGRMKDEHQNVIEITSLVKRNNCGKSLDIARMARDMLGGNGISDEFGVAR 363
>gi|402486943|ref|ZP_10833770.1| glutaryl-CoA dehydrogenase [Rhizobium sp. CCGE 510]
gi|401814035|gb|EJT06370.1| glutaryl-CoA dehydrogenase [Rhizobium sp. CCGE 510]
Length = 395
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 190/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LTSEE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G T + E+ RVD+ + + V SSL M+ I GS+ QK KYLP LA
Sbjct: 71 SPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSQAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 SGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRIKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|291440548|ref|ZP_06579938.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
gi|291343443|gb|EFE70399.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
Length = 396
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 182/356 (51%), Gaps = 5/356 (1%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
+ ++K PP +D DDLL E+ AVR VR + P +A+++EK E P +
Sbjct: 2 SASAKLPPFDPADPLGVDDLLEPEDLAVRDTVRAWAADRVLPYVADWYEKGELPGIRELA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LG + G ++ GYGC G S +A E+ D+ + + V SLAM + GS
Sbjct: 62 RELGGIGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQKQ++LP +A I C+ LTEP +GSD +++ T A + G W+L G+K WI N + A
Sbjct: 122 EEQKQRWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKRDGGDWVLNGRKMWITNGSVA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V V++AR T I G++V D+ G + +I +K LR +++L V +P + LP
Sbjct: 182 GVAVVWAR--TDEGIRGFVVPTDSAGFSAPEIRHKWSLRASVTSELVLDDVRLPADAVLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL
Sbjct: 240 EATGLKGPLSCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
M + IL+ L + + G + P S GK A + R +LG NGI
Sbjct: 300 MAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTVLGANGI 355
>gi|34499373|ref|NP_903588.1| glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
gi|34105223|gb|AAQ61579.1| probable glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC
12472]
Length = 395
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 192/367 (52%), Gaps = 5/367 (1%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVI 92
A + P D D LT +E+ V+ E ++ + P +MA E+ F +I
Sbjct: 2 AASTQRAPFAWEDPLLLQDRLTDDERLVQQSAHEYCQERLLPRVLMANREER--FDREII 59
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
++G L G TI+GYGC G S + E+ RVD+ + + V SSL M I GS
Sbjct: 60 SEMGELGFLGCTIEGYGCAGLSHVAYGLVAREVERVDSGYRSAMSVQSSLVMHPIWAYGS 119
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
+ QK KYLP LA + C+ LTEP GSD +++ T A KV+GG++L G K WI NS A
Sbjct: 120 DAQKDKYLPRLASGEWLGCFGLTEPDSGSDPASMKTRARKVDGGYLLSGSKMWITNSPAA 179
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
DV V++A++ ++I G++++K GL+ I K LR G+I++ V V ++ LP
Sbjct: 180 DVFVVWAKD-DDDEIRGFILEKGMKGLSAPAIHGKFSLRASITGEIVMDDVLVSEDQLLP 238
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
GV + L +R +AW +G + + +Y +R+QFG PLAA Q+ Q KL
Sbjct: 239 GVKGLKGPFGCLNKARYGIAWGAMGAAEFCWHAARQYTLDREQFGRPLAANQLIQLKLAN 298
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M I + ++ +L ++G P SL K +A + + R++ GGNGI +F
Sbjct: 299 MQTEIALGLSAALQVGRLMDEGRAAPEMISLIKRNNCGKALDIARVARDMHGGNGICDEF 358
Query: 393 LVAKVIM 399
V + +M
Sbjct: 359 HVIRHVM 365
>gi|300784175|ref|YP_003764466.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|384147439|ref|YP_005530255.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|399536060|ref|YP_006548722.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|299793689|gb|ADJ44064.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|340525593|gb|AEK40798.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
gi|398316830|gb|AFO75777.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length = 390
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 3/355 (0%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVA 101
P D+ D L EE+A+R VR + + +A+++E P + K G+L +
Sbjct: 5 PDPHDFLDLDAGLAEEERAIRDAVRAYAKDHLLDHVADWYETGALPAAELAKGFGSLGLL 64
Query: 102 GGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
G ++GYGC G S IA E+ VD+ +F+ V SLAM I GSEEQ+Q++LP
Sbjct: 65 GMHLEGYGCAGTSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRWGSEEQRQEWLP 124
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
+A + C+ LTEP GSD ++ T A + W+L G K WI N T ADV V++A+
Sbjct: 125 RMATGEALGCFGLTEPDAGSDPGSMRTRAVRDGSDWVLSGTKMWITNGTVADVAVVWAQ- 183
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T + I G++V PG T ++++K+ LR +++L V +P P V +
Sbjct: 184 -TDDGIRGFVVPTSTPGFTANEVKHKLSLRASLTAELVLDGVRLPSSAAFPEVRGLRGPL 242
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + +G + Y+ Y R QFG PLA FQ+ Q+KL +L +
Sbjct: 243 SCLNEARYGILFGVVGAARACYEAALEYTLSRSQFGKPLAGFQLTQRKLADLLVEVNRAG 302
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
LV ++ +L + GA+ H S GK A + R +LG NGI ++ V +
Sbjct: 303 LVALQIGRLKDAGALHHNHVSFGKMANVRSALDAARTARSMLGANGISLEYPVMR 357
>gi|399040116|ref|ZP_10735570.1| acyl-CoA dehydrogenase [Rhizobium sp. CF122]
gi|398062001|gb|EJL53787.1| acyl-CoA dehydrogenase [Rhizobium sp. CF122]
Length = 395
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 191/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ + ++ P + E + + ++ ++G L + G TI
Sbjct: 11 ADPFRLVEQLTDEERMVQETAHAYAQDKLVPRVLEAFRHEKTDPNIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 71 APEYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDAFGSEAQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPNHGSDPGSMVTRARKVDGGYSLSGAKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V+ + L
Sbjct: 190 GVIRGFILEKGWRGLSAPAIHGKVGLRASITGEVVMDDVFVPEENLLPNVSGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y+ +RKQFG PLAA Q+ Q+KL M+ I +
Sbjct: 250 NSARFGIAWGALGAAEDCYAKARQYVLDRKQFGRPLAANQLIQKKLADMITEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 310 IRLGRMKEDGHPPVELTSIVKRNSCGKALDIARLARDMLGGNGISDEFGIAR 361
>gi|254283480|ref|ZP_04958448.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
gi|219679683|gb|EED36032.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
Length = 395
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 184/353 (52%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + + LT E++ VR + + ++ P + + ++K + ++G + + G TI
Sbjct: 15 DPFLLEAQLTDEQRMVRDSAHQYAQSKLLPRVKDAFQKELTDPEIFREMGEMGLLGSTID 74
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGCPG + E+ RVD+ + + V SSL M I G+E Q++KYLP LA
Sbjct: 75 GYGCPGVDYISYGLVAREVERVDSGYRSMLSVQSSLVMYPIYAFGTEAQREKYLPKLATG 134
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP YGSD + T A V+GG+ L G K WI NS ADV V++A+ T
Sbjct: 135 EWIGCFGLTEPDYGSDPGGMVTRARTVDGGYSLSGAKMWISNSPIADVFVVWAK-TDDGV 193
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
I G++++K PGL+ KIE K+ LR G+I+++ V V ++ LP V + L
Sbjct: 194 IRGFVLEKGMPGLSAPKIEGKLSLRASITGEIVMEDVVVGEDALLPDVEGLKGPFSCLNN 253
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW +G + + Y ERKQF PLAA Q+ Q KL M I + R
Sbjct: 254 ARYGIAWGALGAAETCWHAARDYTMERKQFNRPLAANQLVQLKLADMQTEISLALQGCHR 313
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
L + G + P SL K ++ + R++LGGNGI ++ V + +M
Sbjct: 314 AGVLMDAGQIAPELISLIKRNSCGKSLDVARKARDMLGGNGISDEYPVMRHMM 366
>gi|418531633|ref|ZP_13097544.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
testosteroni ATCC 11996]
gi|371451135|gb|EHN64176.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
testosteroni ATCC 11996]
Length = 397
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+ +R RE + ++ P + + + ++G L + G TI
Sbjct: 8 DDCFQLDQQLTEDERMIRDAAREYCQDKLKPRVQAMFRNESVDISIFREMGELGLLGPTI 67
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E QK KYLP LA
Sbjct: 68 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---- 220
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 128 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVSE 187
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ T QI G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 188 DGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPEVRGLKGP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 248 FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R++LGGNGI +F VA+
Sbjct: 308 LQAALRVGRMKDEHQNVIEITSLVKRNNCGKSLDIARMARDMLGGNGISDEFGVAR 363
>gi|301630321|ref|XP_002944270.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 189/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L+++E+A+R + ++AP + + + + + ++GAL + G TI
Sbjct: 10 DPFLLDQQLSADERAIRDAAAAYCQGQLAPRVRDMFRHEKTDTAIFREMGALGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 EAYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPIHTFGTEAQKQKYLPGLAS 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-- 223
I C+ LTEP +GSD ++ ATKV GG+ L+G K WI NS ADV V++A+ +
Sbjct: 130 GALIGCFGLTEPDHGSDPGSMAARATKVAGGYRLKGSKMWITNSPVADVFVVWAKEVSEG 189
Query: 224 --TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL I K+GLR G+I++ VFVP+E+ P V+ +
Sbjct: 190 GAVGPIRGFVLEKGWKGLAAPAIHGKVGLRTSITGEIVMDDVFVPEENAFPEVHGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y ER+QFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGAMGAAEFCWHTARQYTLERQQFGRPLAANQLVQKKLADMQTEIALGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G SL K +A + L R++LGGNGI +F VA+
Sbjct: 310 QAALRFGRMKDEGIAAVEGTSLIKRNNCGKALDIARLARDMLGGNGISDEFGVAR 364
>gi|50084817|ref|YP_046327.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
gi|49530793|emb|CAG68505.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
Length = 408
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 192/357 (53%), Gaps = 7/357 (1%)
Query: 46 SDYYQFDDLLTSEEQAVR-MKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D + + L+ EE+ +R C +K + ++ ++ + P ++ ++G L + G T
Sbjct: 19 EDPFLLEQQLSEEERMIRDSAFAYCQDKLMQRVLEQFRHEKTDP-NIFREMGELGLLGPT 77
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + EI RVD+ + V SSL M+ I G+EEQKQKYLP L
Sbjct: 78 IPEQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGTEEQKQKYLPKL 137
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 138 ATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVS 197
Query: 224 TN----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+ +I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 198 SEGHVGEIRGFILEKGWDGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLKG 257
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 258 PFTCLNSARYGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEISL 317
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ V R ++ ++G SL K +A E L R+++GGNGI +F VA+
Sbjct: 318 GLQVALRFGRMKDEGIAAVEGTSLIKRNNCGKALEIARLARDMMGGNGISDEFGVAR 374
>gi|319790823|ref|YP_004152463.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
paradoxus EPS]
gi|315593286|gb|ADU34352.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
paradoxus EPS]
Length = 399
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT EE+ +R ++ +AP + E + E + ++GAL + G TI
Sbjct: 11 DPLLLDQQLTDEERMIRDAANAYCQERLAPRVIEGFRTGETDPAIFREMGALGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ RVD+ + V SSL M+ I G+E QKQK+LP LA
Sbjct: 71 EQYGGPGLNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIFEFGTEAQKQKFLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT--- 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 131 GEWIGCFGLTEPDHGSDPGSMVTRAKKVPGGYSLSGAKMWISNSPIADVFVVWAKEVSES 190
Query: 223 -TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T I G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 191 GTVGPIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDGVFCPEENVFPEVQGLKGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W IG + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGISWGAIGAAEDCWHRARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G + S+ K +A + L R+++GGNGI +F VA+
Sbjct: 311 QGSLRLGRMKDEGTASVEITSIMKRNNCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|357398552|ref|YP_004910477.1| Glutaryl-CoA dehydrogenase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386354587|ref|YP_006052833.1| acyl-CoA dehydrogenase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337764961|emb|CCB73670.1| Glutaryl-CoA dehydrogenase, mitochondrial [Streptomyces cattleya
NRRL 8057 = DSM 46488]
gi|365805095|gb|AEW93311.1| acyl-CoA dehydrogenase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 395
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 184/362 (50%), Gaps = 5/362 (1%)
Query: 38 ASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPK 94
S PP SD DDLL E+ AVR VR + P +A+++E E P + +
Sbjct: 3 GSTLPPFDPSDPIGLDDLLAPEDLAVRDTVRRWAADRVLPHIAQWYEAGELPGIRELAQE 62
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG + G ++ GYGC G + +A E+ D+ + + V SLAM I GSEE
Sbjct: 63 LGRIGALGMSLTGYGCAGATAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEE 122
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP +A I C+ LTEP +GSD +A+ T A + W+L G+K WI N + A V
Sbjct: 123 QKREWLPRMAAGEVIGCFGLTEPDHGSDPAAMTTRAERDGTDWVLTGRKMWITNGSVAGV 182
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++AR T I G++V DAPG + +I++K LR +++L V +P + LP V
Sbjct: 183 AVVWAR--TDEGIRGFVVPTDAPGFSAPEIKHKWSLRASVTSELVLDGVRLPADAVLPEV 240
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + ++ Y R+QFG PLA FQ+ Q KL M
Sbjct: 241 TGLRGPLSCLSHARYGIVWGAMGAARSSFEAALEYAVSREQFGKPLAGFQLTQAKLADMA 300
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ +L+ L + + G + P S GK A + R +LG NGI ++ V
Sbjct: 301 VELHKGVLLAHHLGRRMDAGTLRPEQISFGKLNNVREAIDICRTARTILGANGISLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 MR 362
>gi|169846951|ref|XP_001830189.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
cinerea okayama7#130]
gi|116508772|gb|EAU91667.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
cinerea okayama7#130]
Length = 425
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 181/352 (51%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT EE A+R RE ++ + P + + W EF ++P++G L + G TI
Sbjct: 42 DPLSLESQLTEEEIAIRDMAREYCQENLMPRVLKGWRTEEFDRDILPEMGKLGLLGPTIT 101
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + EI RVD+ + V SSL M I G+E QK+KYLP LA+
Sbjct: 102 GYGCAGASNVAYGLVAREIERVDSGYRSTASVQSSLVMHPINEFGTEAQKEKYLPRLAKG 161
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ + LTEP +GSD + TTA +V+GG++L G K WI N+ ADV +++AR +
Sbjct: 162 ELVGAFGLTEPNHGSDPGGMETTAQEVDGGFVLNGSKTWITNAPVADVFIVWARCKWDGR 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++++K GLT I+NK+ LR G I + V VP + LP L
Sbjct: 222 VRGFILEKGMKGLTAPAIKNKVALRASATGSIFMDNVSVPHDALLPKSRGLSSAFSCLNS 281
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G Y ER QF PLA+FQ+ Q+KLV I + +
Sbjct: 282 ARYGISWGVMGALEDCLARTREYALERYQFKRPLASFQLVQKKLVDAHTEIALGLQSSLQ 341
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ +L ++G + P SL K +A + + ++LGGN ++ V + +
Sbjct: 342 VGRLKDQGKVAPEMISLVKRNNCGKALQHARILIDILGGNASADEYHVGRHV 393
>gi|171320424|ref|ZP_02909459.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
MEX-5]
gi|171094342|gb|EDT39414.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
MEX-5]
Length = 395
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDAGIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD + T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L +VFVP+E+ LP V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLLPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|226187451|dbj|BAH35555.1| probable glutaryl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
Length = 390
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 187/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P S+ + D LL +EE A+R VR+ ++ I P + E++E A P + K LGAL V
Sbjct: 4 PQSLSELFAIDTLLDAEEIAIRDTVRKMVDDRIRPHIGEWFEAAALPARELAKELGALGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSEEQK+++L
Sbjct: 64 LGMHLEGYGCAGMSATAYGLACQELEAVDSGIRSLVSVQGSLAMFAIHHNGSEEQKEEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + T A + W+L G K WI N + ADV V++AR
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPGGMRTNAKRDGDDWVLNGTKMWITNGSIADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + + G++V D PG + +I+NK+ LR +++L+ V +P LP
Sbjct: 184 --TDDGVRGFVVPADTPGFSAPEIKNKMSLRASVTSELVLEDVRLPASAMLPKARGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++RK F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLETAISYARDRKVFDKSLAAYQITQAKIADMAVELGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ L +L + G + P S GK RE + + RE +LG NGI ++ V +
Sbjct: 302 QLLAIHLGRLKDAGTVRPEQVSTGK---LNNVREAIKIARECRTILGANGITLEYPVIR 357
>gi|170702516|ref|ZP_02893395.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170132583|gb|EDT01032.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 395
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 188/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDIEIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA
Sbjct: 69 PEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD + T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEEN 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+ I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V+ +
Sbjct: 189 GKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENLLPNVSGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|158425182|ref|YP_001526474.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
gi|158332071|dbj|BAF89556.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
Length = 405
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 193/353 (54%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++F+D LT EE+ VR R+ ++++ P + + F ++ ++G L + G TI
Sbjct: 20 ADPFRFEDQLTEEERLVRDTARDYAQEKLLPRVTSAYLDERFDREIMSEMGELGLLGVTI 79
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G +A E+ RVD+ + + V SSL M I G E Q++KYLP LA
Sbjct: 80 PENYGGAGLGYVSYGLAAREVERVDSGYRSAMSVQSSLVMHPIYAYGDESQRKKYLPKLA 139
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
+ C+ LTEP GSD + + T A K++GG+ L G K WI NS AD+ V++A++
Sbjct: 140 TGEWVGCFGLTEPDAGSDPAGMRTRAEKIDGGYRLTGAKMWITNSPIADIAVVWAKSAAH 199
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++V++ G + KIE K+ LR G+I+L+ V +P+E+ LP V+ +
Sbjct: 200 GDAIRGFIVERGMKGFSTPKIEKKLSLRASITGEIVLEGVEIPEENLLPNVSGLKGPFGC 259
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W +G + + +Y +RKQFG PLA Q+ Q+KL M +I +
Sbjct: 260 LNRARYGIGWGVLGAAEACLEAARQYTLDRKQFGRPLAQTQLVQKKLADMSTDIAFGLQA 319
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R +L+++G + P S K +A + + R++ GGNGI ++F V +
Sbjct: 320 CLRAGRLFDEGQLAPETISYIKRNNCGKALDIARVARDMHGGNGISAEFHVIR 372
>gi|425744391|ref|ZP_18862448.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-323]
gi|425490904|gb|EKU57195.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-323]
Length = 402
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 189/355 (53%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+SEE+ +R + + ++ P + E + + + ++G L + G TI
Sbjct: 14 DPFLLEQQLSSEERMIRDSAQAYCQDKLMPRVLEQFRHEKTDPSIFREMGELGLLGPTIS 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ IA G+E QKQKYLP LA
Sbjct: 74 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPIAEFGTEAQKQKYLPKLAT 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-- 223
I C+ LTEP +GSD ++ A KV GG+ L G K WI NS ADV V++A+ +
Sbjct: 134 GEYIGCFGLTEPDHGSDPGSMLCRAKKVAGGYRLSGSKMWITNSPIADVFVVWAKEVSET 193
Query: 224 --TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+I G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V +
Sbjct: 194 GNVGEIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDQVFVPEENAFPEVRGLKGPF 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 254 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ + G + SL K +A E L R+++GGNGI +F VA+
Sbjct: 314 QAALRFGQMKDAGIASVEGTSLIKRNNCGKALEIARLARDMMGGNGISDEFGVAR 368
>gi|404446626|ref|ZP_11011731.1| glutaryl-CoA dehydrogenase [Mycobacterium vaccae ATCC 25954]
gi|403650119|gb|EJZ05398.1| glutaryl-CoA dehydrogenase [Mycobacterium vaccae ATCC 25954]
Length = 397
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 176/348 (50%), Gaps = 3/348 (0%)
Query: 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP-KLGALRVAGGTIKGY 108
+ D LL EE+ +R VR ++ I+P +A ++E E P + +LG L + G ++GY
Sbjct: 19 RVDSLLDDEERQIRDTVRALVKARISPDIAAWYESGELPVRELAVELGELGLLGMHLQGY 78
Query: 109 GCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNT 168
GC G S +A E+ D+ + + V SLAM + GSEEQKQ++LP +A
Sbjct: 79 GCAGTSAVAYGLACLELEAGDSGIRSLVSVQGSLAMFALHAFGSEEQKQQWLPEMAAGRK 138
Query: 169 IACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
I C+ LTEP +GS+ S + T AT+ WIL+G K WI N + ADV V++AR T I
Sbjct: 139 IGCFGLTEPDFGSNPSGMRTRATRSGDDWILDGTKMWITNGSVADVAVVWAR--TEEGIR 196
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSR 288
G+ V D PG T I +K+ LR +++L V +PD RLPG S + L +R
Sbjct: 197 GFAVPTDTPGFTARSITSKMSLRASVTSELVLDGVRLPDSARLPGATSLRAPLTCLNEAR 256
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ + +G + + Y + R QF P+ FQ+ QQKL M L+ L
Sbjct: 257 FGIVFGSVGAARDCLESALNYAQSRHQFDRPIGGFQLTQQKLADMTLEYGKAFLLALHLG 316
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + + SLGK A E R +LG +GI ++ V +
Sbjct: 317 RAKDATGLRSEEVSLGKLNNVREAIEIARTSRTILGASGITGEYPVMR 364
>gi|365085313|ref|ZP_09327129.1| glutaryl-CoA dehydrogenase [Acidovorax sp. NO-1]
gi|363417846|gb|EHL24897.1| glutaryl-CoA dehydrogenase [Acidovorax sp. NO-1]
Length = 398
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 19/363 (5%)
Query: 49 YQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
+Q+DD LT +E+A+R + ++AP + + + + + ++G + + G
Sbjct: 6 FQWDDPFLLSQQLTDDERAIRDAAAAYCQNKLAPRVLDAFRHEKMDVSIFREMGEVGLLG 65
Query: 103 GTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
TI + YG PG S + E+ RVD+ + V SSL M+ I GSE Q+QKYLP
Sbjct: 66 PTIPEQYGGPGLSYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIYEFGSEAQRQKYLP 125
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
LA I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 126 KLASGEWIGCFGLTEPDHGSDPGSMATRAYKVDGGYKLKGSKMWITNSPVADVFVVWAKE 185
Query: 222 TT----TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++++K GLT I K+GLR G+I++ VFVP+E+ P V
Sbjct: 186 VSEGGAVGPIRGFVLEKGMKGLTAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVQGL 245
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M
Sbjct: 246 KGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADM---- 301
Query: 338 QAMILVGWRLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
Q I +G + C ++ + G + S+ K +A + L R+++GGNGI +F
Sbjct: 302 QTEIAIGLQACLQFGRMKDAGTASVEGTSIIKRNSCGKALDIARLARDMMGGNGISDEFG 361
Query: 394 VAK 396
VA+
Sbjct: 362 VAR 364
>gi|161525739|ref|YP_001580751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
multivorans ATCC 17616]
gi|189349539|ref|YP_001945167.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221214378|ref|ZP_03587349.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
gi|421480448|ref|ZP_15928071.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
multivorans CF2]
gi|160343168|gb|ABX16254.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
ATCC 17616]
gi|189333561|dbj|BAG42631.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221165635|gb|EED98110.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
gi|400221006|gb|EJO51495.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
multivorans CF2]
Length = 395
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 189/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++AP + E + + ++G + + G TI + YG
Sbjct: 14 LDQQLTEDERMVRDAAHAYAQDKLAPRVTEAFRHERTDAAIFREMGEVGLLGPTIPEQYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA I
Sbjct: 74 GPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSDAQKEKYLPKLATGEWI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I
Sbjct: 134 GCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLDEDGKDTI 193
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ + L +
Sbjct: 194 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFTCLNSA 253
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 254 RYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 313
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|332187490|ref|ZP_08389227.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
S17]
gi|332012419|gb|EGI54487.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
S17]
Length = 391
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DD LT +E+ +R R E +AP + E + K + ++G L + G TI
Sbjct: 7 ADPFLLDDQLTDDERMIRDTARAYAEDRLAPRIVEAFAKEHTDPAIFREMGELGLLGPTI 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ +G G S + E+ R+D+ + + V SSL M I GS+EQK +YLP LA
Sbjct: 67 PEEFGGVGASYVAYGLIAREVERIDSGYRSMMSVQSSLVMYPIHAYGSDEQKHRYLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP GSD + TTA KVEGG++L G K WI N+ ADV VI+A++
Sbjct: 127 SGEWIGCFGLTEPDAGSDPGGMRTTAKKVEGGYVLSGAKTWISNAPIADVFVIWAKSEAH 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++++K GL+ KIENK+ LR G +++ +V V +E LP V +
Sbjct: 187 GGAIRGFVLEKGVKGLSAPKIENKLSLRASITGMVMMDEVAVGEEALLPHVEGLKGPFGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +RKQF PLAA Q+ Q+KL M I +
Sbjct: 247 LNRARYGISWGALGAAEFCFHAARQYGLDRKQFDRPLAATQLYQKKLADMETEIALGLQA 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++G P S+ K +A + R++ GGNGI ++ V + +M
Sbjct: 307 SLRVGRLMDEGRFAPEMISIVKRNNVGKALDIARASRDMHGGNGISGEYQVMRHLM 362
>gi|145589003|ref|YP_001155600.1| acyl-CoA dehydrogenase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047409|gb|ABP34036.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 392
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 188/355 (52%), Gaps = 2/355 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L+ EE+ +R E + + P + E + + ++G L + G TI
Sbjct: 9 ADPLLLDTQLSEEERMIRDAAAEYAQGRLMPRIQEAYRNETTDPAIFREMGELGLLGVTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG + + EI RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 69 PEQYGGSNLNYVSYGLIAREIERVDSGYRSMMSVQSSLVMVPINDFGTEAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP YGSDA + T A KV GG+ L G K WI N+ ADV V++A+N
Sbjct: 129 SGEWIGCFGLTEPNYGSDAGGMITRAKKVPGGFSLTGSKMWISNAPIADVFVVWAKNDE- 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I GY+++K GL+ KI K+GLR G+I++ +VFVPDE+ P V + L
Sbjct: 188 GIIRGYILEKGMKGLSAPKISGKLGLRASITGEIVMDEVFVPDENEFPEVTGLKGPFTCL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 248 NSARYGISWGALGAAEWCWHAARQYTLDRKQFGKPLAANQLIQKKLADMQTEIALGLQGC 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G P S+ K ++ + + R++ GGNGI ++ VA+ +M
Sbjct: 308 LRLGRMKDEGIAAPEITSIMKRNSCGKSLDIARMARDMHGGNGISDEYGVARHMM 362
>gi|386855263|ref|YP_006259440.1| putative glutaryl-CoA dehydrogenase [Deinococcus gobiensis I-0]
gi|379998792|gb|AFD23982.1| putative glutaryl-CoA dehydrogenase [Deinococcus gobiensis I-0]
Length = 386
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 181/355 (50%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI 105
D + +LLT +E+ +R VR + E+ P +A +W+ E P V+ G + + G TI
Sbjct: 3 DEFAVAELLTPDERLIRESVRAYADAELLPHIAGWWDGGELPVRDVMRSFGEMGLLGPTI 62
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + + E+ RVD+ + V SL M I GSEEQK+++LP LA
Sbjct: 63 PEEYGGAGASYSAYGAMMYELERVDSGLRSAASVQGSLVMFPIHTYGSEEQKRRWLPGLA 122
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD A+ T A + ++L G K WI NS ADV V++A++
Sbjct: 123 SGELIGCFGLTEPDGGSDPGAMRTRARRDGDHYVLNGSKMWITNSPAADVAVVWAKDDE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G+ V D PG KIE K+ LR G+I+L+ +P E+ LPG + L
Sbjct: 182 GVVRGFTVPTDTPGFHAPKIERKMSLRASLTGEIVLEDCRIPAENLLPGSQGLKSPLSCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G V Y R FG P+A Q+ Q KLV+M + +L+
Sbjct: 242 TSARFGIAWGAMGALEAVLQTALDYAGSRTTFGKPIAGRQLVQDKLVRMATDHSTGLLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + G M S K A + L RE+LGGNGI +++ V + ++
Sbjct: 302 WRLGTLKDAGRMNFAQVSYAKRNNVRVALQGARLAREMLGGNGITTEYPVIRHML 356
>gi|395237205|ref|ZP_10415299.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|423350925|ref|ZP_17328577.1| hypothetical protein HMPREF9719_00872 [Turicella otitidis ATCC
51513]
gi|394487570|emb|CCI83387.1| glutaryl-CoA dehydrogenase [Turicella otitidis ATCC 51513]
gi|404387071|gb|EJZ82199.1| hypothetical protein HMPREF9719_00872 [Turicella otitidis ATCC
51513]
Length = 409
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 189/373 (50%), Gaps = 24/373 (6%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRV 100
P +D D LL+ EE R ++ E +++ + P + E++E A P +I ++ R+
Sbjct: 1 MPGSVTDLMGIDSLLSDEEIQTRERIAEFVDRRLRPKIGEWYENAVLPVELIEEMAEQRL 60
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G +KGYGC G S +A+ E+ D+ T + V SLAM I GSEEQK+K+L
Sbjct: 61 FGMHLKGYGCAGRSAVEYGLAMQELEAGDSGIRTVVSVQGSLAMSAIYKHGSEEQKEKWL 120
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A+ I C+ LTEP GSD ++ T AT +G W L GQKRWIG ++ A V +I+AR
Sbjct: 121 PRMAKGEVIGCFGLTEPTAGSDPGSMATWATYEDGEWSLSGQKRWIGLASIAGVAIIWAR 180
Query: 221 NTTTNQ------------------INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
+ +Q + G++V D+ G T IE K+ +R DI L
Sbjct: 181 VSNEDQVASGAIEEDKIKPGTDSAVRGFIVPTDSNGFEATPIEQKLSMRASLQCDIELSD 240
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
V +P + LP + L +R ++W +G + ++ Y ER QFG PL+
Sbjct: 241 VRLPKDAILPKHPGLKGPLSCLNEARYGISWGSLGAARDSIEVALDYAGERLQFGEPLSG 300
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE- 381
+Q+ Q+KLV M + L+ RL + + G + S+ K A R + + RE
Sbjct: 301 YQLTQKKLVDMTVALNQGQLLALRLGRAKDAGELENHMISVAK---LANCRTAIEIAREC 357
Query: 382 --LLGGNGILSDF 392
+LGGNGI +++
Sbjct: 358 RTILGGNGITTEY 370
>gi|407940376|ref|YP_006856017.1| glutaryl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407898170|gb|AFU47379.1| glutaryl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 398
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 19/363 (5%)
Query: 49 YQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
+Q+DD LT +E+A+R + ++AP + + + + + ++G + + G
Sbjct: 6 FQWDDPFLLSQQLTDDERAIRDAAAAYCQDKLAPRVLDAFRHEKMDVSIFREMGEVGLLG 65
Query: 103 GTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
TI + YG PG S + E+ RVD+ + V SSL M+ I GSE Q+QKYLP
Sbjct: 66 PTIPEQYGGPGLSYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIYEFGSEAQRQKYLP 125
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
LA I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 126 KLASGEWIGCFGLTEPDHGSDPGSMATRAYKVDGGYKLKGSKMWITNSPVADVFVVWAKE 185
Query: 222 TT----TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++++K GLT I K+GLR G+I++ VFVP+E+ P V
Sbjct: 186 VSEGGAVGPIRGFVLEKGMKGLTAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVQGL 245
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M
Sbjct: 246 KGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADM---- 301
Query: 338 QAMILVGWRLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
Q I +G + C ++ + G + S+ K +A + L R+++GGNGI +F
Sbjct: 302 QTEIAIGLQACLQFGRMKDAGTASVEGTSIIKRNSCGKALDIARLARDMMGGNGISDEFG 361
Query: 394 VAK 396
VA+
Sbjct: 362 VAR 364
>gi|53720357|ref|YP_109343.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
gi|52210771|emb|CAH36755.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
K96243]
Length = 413
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 27 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 86
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 87 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 146
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 147 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 206
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 207 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 266
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 267 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 326
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 327 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 380
>gi|53725603|ref|YP_103644.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
gi|67643911|ref|ZP_00442654.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
gi|121600521|ref|YP_992186.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
gi|124385346|ref|YP_001028631.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
gi|126449936|ref|YP_001081467.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10247]
gi|126453011|ref|YP_001067460.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
gi|134280085|ref|ZP_01766796.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
gi|166998257|ref|ZP_02264117.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
gi|167817165|ref|ZP_02448845.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 91]
gi|167825577|ref|ZP_02457048.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 9]
gi|167895645|ref|ZP_02483047.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
7894]
gi|167904038|ref|ZP_02491243.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
13177]
gi|167912294|ref|ZP_02499385.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 112]
gi|167920253|ref|ZP_02507344.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
BCC215]
gi|217420906|ref|ZP_03452411.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
gi|226194177|ref|ZP_03789776.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
Pakistan 9]
gi|237813587|ref|YP_002898038.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
MSHR346]
gi|242317700|ref|ZP_04816716.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1106b]
gi|254175546|ref|ZP_04882206.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
gi|254180842|ref|ZP_04887440.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1655]
gi|254191681|ref|ZP_04898184.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
Pasteur 52237]
gi|254202338|ref|ZP_04908701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
gi|254207672|ref|ZP_04914022.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
gi|254356425|ref|ZP_04972701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
2002721280]
gi|418552624|ref|ZP_13117479.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 354e]
gi|52429026|gb|AAU49619.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
gi|121229331|gb|ABM51849.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
gi|124293366|gb|ABN02635.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
gi|126226653|gb|ABN90193.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1106a]
gi|126242806|gb|ABO05899.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC
10247]
gi|134248092|gb|EBA48175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
gi|147746585|gb|EDK53662.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
gi|147751566|gb|EDK58633.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
gi|148025422|gb|EDK83576.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
2002721280]
gi|157939352|gb|EDO95022.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
Pasteur 52237]
gi|160696590|gb|EDP86560.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
gi|184211381|gb|EDU08424.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1655]
gi|217396318|gb|EEC36335.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
gi|225933642|gb|EEH29630.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
Pakistan 9]
gi|237504311|gb|ACQ96629.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
MSHR346]
gi|238525376|gb|EEP88804.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
gi|242140939|gb|EES27341.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1106b]
gi|243065337|gb|EES47523.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
gi|385372779|gb|EIF77870.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 354e]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|290997840|ref|XP_002681489.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
gi|284095113|gb|EFC48745.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
Length = 431
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 187/353 (52%), Gaps = 3/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LLT EE+ +R +V + ++ P + E K F ++ ++G + + G I
Sbjct: 47 DPLNVESLLTEEEKEIRDQVHGYCQAKLMPRVLEANRKEHFDPEIMREMGEMGMLGINIH 106
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
G+GC G S + E+ RVD+ + + V SSL M I G+E QKQKYLP LA
Sbjct: 107 GHGCAGASNVAYGLVAREVERVDSGYRSAMSVQSSLVMHPINQWGNEAQKQKYLPKLATG 166
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GSD S++ T A + G +IL G K WI NS AD+ V++AR+
Sbjct: 167 ELIGCFGLTEPNHGSDPSSMETKAKLSQCGKYYILNGSKMWITNSPIADIFVVWARSEAH 226
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++++K GLT KIE K+ LR G I + V VP E+ LP +
Sbjct: 227 EGKIKGFILEKGMKGLTAPKIEGKMSLRASITGSIGMDDVHVPVENLLPHASGLGGPFSC 286
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y +RKQFG PLA Q+ Q+K+ ML I ++
Sbjct: 287 LNSARYGIAWGALGAAEYCFHTARQYQIDRKQFGRPLAQNQLPQKKMADMLTEISLGLVS 346
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+L +L +KG P S+ K +A E + R++LGGNGI ++ + +
Sbjct: 347 CVQLGRLKDKGEWAPEMISMLKRNNAGKALEIARVCRDMLGGNGIADEYHIIR 399
>gi|377560363|ref|ZP_09789877.1| glutaryl-CoA dehydrogenase [Gordonia otitidis NBRC 100426]
gi|377522475|dbj|GAB35042.1| glutaryl-CoA dehydrogenase [Gordonia otitidis NBRC 100426]
Length = 406
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 192/373 (51%), Gaps = 13/373 (3%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVI 92
AT +KF A D D + +E AVR VR + + + P +A+++E+ P +
Sbjct: 3 ATATTKF--TAIDPLNIDLGYSDDELAVRDSVRGFLAEHVTPHIADWFEEGGIPIARDLF 60
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+ G L V G + GYGC G S +A E+ D+ + + V SLAM +I GS
Sbjct: 61 KQFGQLGVLGMHLDGYGCGGASSVHYGLASLELEACDSGIRSMVSVQGSLAMFSIYNNGS 120
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQK +LPS+A+ T+ C+ LTEP GSD +++ T A + WIL+G+K WI N+ A
Sbjct: 121 EEQKNHWLPSMAEGTTVGCFGLTEPDAGSDPASMKTRARRDGDDWILDGRKMWITNAPIA 180
Query: 213 DVLVIFARNTTTN---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
DV V++A+ + + G++V D PG++ +I++K LR G+I+L V +P +
Sbjct: 181 DVAVVWAQTDLPDGGVGVRGFIVPTDTPGVSTPEIKHKASLRASTTGEIVLDNVRLPADA 240
Query: 270 RLPGVNSFQDTSKV------LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAF 323
+PG + + L+ +R + W IG + + Y +R QFG P+A F
Sbjct: 241 LMPGNDDLHKGRGIKAPLSSLSEARYGIIWGSIGAARTAWQAALDYATQRTQFGKPIAGF 300
Query: 324 QINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELL 383
Q+ Q KL M +Q L+ + L +L + + P S GK T A E R +L
Sbjct: 301 QLTQTKLADMAVELQKGQLLAYHLGRLKDSVGLRPDQVSFGKLNNTREAIEICRTARTIL 360
Query: 384 GGNGILSDFLVAK 396
GGNGI ++ V +
Sbjct: 361 GGNGISLEYPVIR 373
>gi|241765709|ref|ZP_04763657.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
gi|241364426|gb|EER59539.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
Length = 398
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 186/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + D LT +E+A+R R + ++AP + E + + + ++G L + G TI
Sbjct: 9 DDPFLLDQQLTDDERAIRDAARAYCQDKLAPRVLEMFRHEKTDVTIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E QKQKYLP LA
Sbjct: 69 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-- 222
I C+ LTEP +GSD ++ T A K GG+ L+G K WI NS ADV V++A+
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMATRAYKTAGGYKLKGSKMWITNSPVADVFVVWAKEVSE 188
Query: 223 --TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T I G++++K GLT I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 189 GGTVGPIRGFVLEKGMKGLTAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVQGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K +A + L R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 364
>gi|374991014|ref|YP_004966509.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
gi|297161666|gb|ADI11378.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
Length = 398
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 184/360 (51%), Gaps = 5/360 (1%)
Query: 40 KFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLG 96
PP +D DDLL ++ AVR VR+ + P +A+++E+ E P + +LG
Sbjct: 8 SLPPFDPADPLGIDDLLAPDDLAVRTTVRQWAATRVLPQIADWYERGELPGIRELARELG 67
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
+L G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQK
Sbjct: 68 SLGALGMSLTGYGCTGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQK 127
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
+++LP +A I C+ LTEP +GSD +A+ T A + W+L G+K WI N + A V V
Sbjct: 128 ERWLPPMAAGEIIGCFGLTEPDHGSDPAAMRTYAKRDGSDWVLTGRKMWITNGSVAGVAV 187
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
++AR T I G++V D+PG + +I +K LR ++++ +V +P + LP V
Sbjct: 188 VWAR--TDEGIRGFVVPTDSPGFSAPEIRHKWSLRASVTSELVMDEVRLPADAVLPEVTG 245
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L+ +R + W +G + ++ Y R+QFG P+ FQ+ Q KL M
Sbjct: 246 LRGPLSCLSHARYGIVWGSMGAARACFEAALEYAGSREQFGRPIGGFQLTQAKLADMAVE 305
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L+ L + G + P S GK A E R +LG NGI ++ V +
Sbjct: 306 LHKGVLLAHHLGMRMDAGTLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVMR 365
>gi|126440657|ref|YP_001060196.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
gi|126220150|gb|ABN83656.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 190/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEVGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|393247826|gb|EJD55333.1| acyl-CoA dehydrogenase NM domain-like protein [Auricularia delicata
TFB-10046 SS5]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 185/352 (52%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + D LLT EE+A+R + ++++ P + + EF ++ ++G L + G TI+
Sbjct: 12 DPLKLDALLTEEERAIRDTAHDYCQEKLFPRILHAYRTEEFDRTILTEMGELGLLGPTIQ 71
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + E+ RVD+ + + V SSL M I G E QK+KY+P LA+
Sbjct: 72 GYGCAGVSSVAYGLIAREVERVDSGYRSTMSVQSSLVMHPINEFGKEAQKEKYIPRLAKG 131
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
I C+ LTEP +GSD + + TTA +GG+I+ G K WI N+ AD+ V++AR N+
Sbjct: 132 EIIGCFGLTEPNHGSDPAGMETTADTTDGGYIINGSKTWISNAPVADLFVVWARCKWDNR 191
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G+L++K A GL I+NK+ LR G I + V V ++ LPG L
Sbjct: 192 VRGFLLEKGAKGLEAPAIKNKLALRASLTGSIFMDHVKVSEDALLPGGVGLSAPFSCLNS 251
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G D + ER QF PLA+FQ+ Q+KLV + +L +
Sbjct: 252 ARFGISWGVMGALQDCIDRARAHALERTQFKRPLASFQLVQKKLVDAQTEVALGLLASLQ 311
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ +L + G P S+ K +A + + ++LGGN ++ + + +
Sbjct: 312 VGRLKDAGTWAPEMVSMVKRNNCGKALQHARVVLDILGGNACSDEYHIGRHV 363
>gi|451936933|gb|AGF87243.1| acyl-CoA dehydrogenase domain protein [uncultured organism]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 5/359 (1%)
Query: 42 PPCASDYYQ---FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
P A D+ D LT E+ VR R ++++ P + + ++G L
Sbjct: 4 PRAAFDWQDPLLLDTQLTETERLVRDTARAYAQEKLQPRAQHAFRHEHTDPAIFREMGEL 63
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G TI + YG G + + EI VD+ + + V SSL M+ I G+E QK+
Sbjct: 64 GLLGPTIPEEYGGAGLNYVAYGLIAREIEYVDSGYRSMMSVQSSLVMVPIHEFGTESQKR 123
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
KYLP LA+ I C+ LTEP +GSD + + A +VEGG++L G K WI NS ADV V+
Sbjct: 124 KYLPKLARGEWIGCFGLTEPNHGSDPGGMESRARRVEGGYLLSGNKMWITNSPIADVFVV 183
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ QI G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V
Sbjct: 184 WAKDDE-GQIRGFILEKGWKGLSAPVIHGKVGLRTSVTGEIVMDEVFVPEENAFPEVRGL 242
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + Y+ Y+ ERKQFG PLAA Q+ Q+KL M I
Sbjct: 243 KGPFTCLNSARFGIAWGALGAAQACYETARNYVLERKQFGRPLAANQLIQKKLADMCTEI 302
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++G SL K +A + R++LGGNGI ++ VA+
Sbjct: 303 ALGLQTVLRIGRMKDEGIAAVELTSLVKRNSCGKALDIARTARDMLGGNGISDEYCVAR 361
>gi|221201024|ref|ZP_03574064.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
CGD2M]
gi|221206524|ref|ZP_03579537.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
gi|421468067|ref|ZP_15916637.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
multivorans ATCC BAA-247]
gi|221173833|gb|EEE06267.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
gi|221178874|gb|EEE11281.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
CGD2M]
gi|400232683|gb|EJO62282.1| acyl-CoA dehydrogenase, N-terminal domain protein [Burkholderia
multivorans ATCC BAA-247]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 189/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR + ++AP + E + + ++G + + G TI + YG
Sbjct: 14 LDQQLTEDERMVRDAAHAYAQDKLAPRVTEAFRHERTDAAIFREMGEVGLLGPTIPEQYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ R+D+ + + V SSL M+ I GS+ QK+KYLP LA I
Sbjct: 74 GPGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPIYEFGSDAQKEKYLPKLATGEWI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I
Sbjct: 134 GCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLDEDGKDTI 193
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ + L +
Sbjct: 194 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFTCLNSA 253
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL
Sbjct: 254 RYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRL 313
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 GRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|221065703|ref|ZP_03541808.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
gi|220710726|gb|EED66094.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
Length = 397
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 186/356 (52%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D LT +E+ +R R+ + ++ P + + + ++G L + G TI
Sbjct: 8 DDCFQLDQQLTEDERMIRDAARDYCQDKLKPRVQAMFRNESVDISIFREMGELGLLGPTI 67
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E QK KYLP LA
Sbjct: 68 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---- 220
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 128 SGEFIGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVSE 187
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ T QI G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 188 DGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPDVRGLKGP 247
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 248 FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 307
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R++LGGNGI +F VA+
Sbjct: 308 LQAALRVGRMKDEHQNVIEITSLIKRNNCGKSLDIARMARDMLGGNGISDEFGVAR 363
>gi|395006668|ref|ZP_10390474.1| acyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394315368|gb|EJE52176.1| acyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 399
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 189/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + D L+ +E+ VR + ++AP + E + + + ++G + + G TI
Sbjct: 10 DDPFLLDQQLSDDERMVRDAAAAYCQDKLAPRVLEAFRHEKMDTTIFREMGEVGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + V SSL M+ I G+E Q+QKYLP LA
Sbjct: 70 PEQYGGPGLNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIYEFGTEAQRQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+ +
Sbjct: 130 SGEWIGCFGLTEPDHGSDPGSMATRAYKVDGGYKLKGSKMWITNSPVADVFVVWAKEVSE 189
Query: 224 ---TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 190 GGAVGPIRGFVLEKGMKGLSAPAIHGKVGLRASVTGEIVMDDVFVPEENAFPEVQGLKGP 249
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 250 FTCLNSARYGIAWGALGAAEFCWHTSRQYTLDRKQFGRPLAANQLIQKKLADMQTEIAIG 309
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ RL ++ ++G SL K +A + L R+++GGNGI +F VA+
Sbjct: 310 LQACLRLGRMKDEGTAAVEATSLIKRNSCGKALDIARLARDMMGGNGISDEFGVAR 365
>gi|395764194|ref|ZP_10444863.1| acyl-CoA dehydrogenase domain-containing protein [Janthinobacterium
lividum PAMC 25724]
Length = 393
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
+D LT EE+AV R+ + + P + E + + ++G L + G TI + YG
Sbjct: 14 LEDQLTGEERAVLEAARDYCQGSLVPRVLESFRHGRTDAAIFREMGELGLLGSTIPEQYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + +A E+ RVD+ + + V SSL M+ I G+EE KQKYLP LA I
Sbjct: 74 GAGLNYVCYGLAAREVERVDSGYRSMMSVQSSLVMVPINAFGNEETKQKYLPKLATGEFI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A++ I G
Sbjct: 134 GCFGLTEPDHGSDPGSMVTRARKVPGGYSLSGAKMWITNSPIADVFVVWAKD-DEGAIRG 192
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ +I K+GLR G+I++ +VF P+E+ P V + L +R
Sbjct: 193 FVLEKGWKGLSAPEIHGKVGLRTSITGEIVMDEVFCPEENAFPDVRGLKGPFTCLNSARY 252
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+AW +G + Y +Y +RKQFG PLAA Q+ Q+KL ML I + RL +
Sbjct: 253 GIAWGALGAAEDCYLKARQYTMDRKQFGRPLAANQLVQKKLADMLTEITMGLQGCLRLGR 312
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G+ S+ K +A + + R+++GGNGI ++ V +
Sbjct: 313 MKDEGSPAVEITSIMKRNSCGKALDIARVARDMMGGNGISDEYGVIR 359
>gi|78065380|ref|YP_368149.1| acyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77966125|gb|ABB07505.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 189/345 (54%), Gaps = 3/345 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT EE+ VR + + ++AP + E + + ++G + + G TI + YG PG
Sbjct: 18 LTEEERMVRDAAQAYAQDKLAPRVTEAFRHERTDAEIFREMGEVGLLGPTIPEEYGGPGL 77
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA I C+
Sbjct: 78 NYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSDAQKQKYLPKLATGEWIGCFG 137
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYL 231
LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I G++
Sbjct: 138 LTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEENGKDAIRGFI 197
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
++K GL+ I K+GLR G+I+L +VFVP+E+ +P V+ + L +R +
Sbjct: 198 LEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSGLRGPFTCLNSARYGI 257
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 258 AWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMK 317
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 318 DEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|448746486|ref|ZP_21728153.1| Acyl-CoA dehydrogenase/oxidase [Halomonas titanicae BH1]
gi|445565824|gb|ELY21932.1| Acyl-CoA dehydrogenase/oxidase [Halomonas titanicae BH1]
Length = 405
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 190/360 (52%), Gaps = 8/360 (2%)
Query: 45 ASDYYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
A ++ +DD LT EE+ +R + ++ + P + + + F ++ ++G L
Sbjct: 13 AMTHFNWDDPLLLEQQLTDEERQIRDAAYDYCQENLQPRVLTAFREERFDREIMTEMGEL 72
Query: 99 RVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G T+ YG G + + E+ RVD+ + + V SSL M I GSEEQKQ
Sbjct: 73 GLLGATVSPEYGGAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIETYGSEEQKQ 132
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
K+LP LA + C+ LTEP +GSD + T A KV+GG+ L G K WI NS AD+ V+
Sbjct: 133 KFLPKLASGEMVGCFGLTEPDHGSDPGGMITRAEKVDGGYRLTGAKMWITNSPIADIAVV 192
Query: 218 FARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
+A++ NQI G++V++ G T KIE K+ LR G+I+L FVP+E+ LP V+
Sbjct: 193 WAKSAAHDNQIKGFIVERGTEGFTTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNVSG 252
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M
Sbjct: 253 LKGPFGCLNKARYGIAWGVMGTAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTE 312
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I + ++ +L + G P SL K +A + R++ GGNG+ ++ V +
Sbjct: 313 ITLGLQAALQVGRLMDSGNWAPEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIR 372
>gi|217968860|ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
gi|217506187|gb|ACK53198.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 189/351 (53%), Gaps = 2/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT E+ VR R + ++ P + E + + + ++G L + G TI
Sbjct: 12 DPLLLDLQLTETERMVRDTARAYSQDKLLPRVQEAFRHEKTDAAIFREMGELGLLGATIP 71
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 72 EQYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLAT 131
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++
Sbjct: 132 GEWIGCFGLTEPNHGSDPGSMITRARKVDGGFSLSGSKMWITNSPIADVFVVWAKDDE-G 190
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
QI G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V + L
Sbjct: 191 QIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPTVRGLKGPFTCLN 250
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y+ +Y +R QFG PLAA Q+ Q+KL ML I +
Sbjct: 251 SARFGIAWGALGAAEACYETARQYTMDRNQFGRPLAANQLIQKKLADMLTEITLGLQAVL 310
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ ++G S+ K +A + + R++LGGNGI ++ VA+
Sbjct: 311 RVGRMKDEGIAPVEITSIIKRNSCGKALDIARMARDMLGGNGISDEYPVAR 361
>gi|124268354|ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
gi|124261129|gb|ABM96123.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
Length = 422
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 195/368 (52%), Gaps = 4/368 (1%)
Query: 30 VAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF 89
V++P+ A+ F D D L+ +E+AVR + +AP + E + +
Sbjct: 25 VSYPETAMAASFH--WDDPLLLDSQLSEDERAVRDAAQAYCRDRLAPRVLEAFRHEKTDP 82
Query: 90 HVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIA 148
+ ++G L + G T+ + YG G + + E+ RVD+ + + V SSL M+ I
Sbjct: 83 AIFREMGELGLLGATLPEAYGGAGLNHVCYGLVAREVERVDSGYRSMMSVQSSLVMVPIH 142
Query: 149 LCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208
G+E QKQKYLP LA+ I C+ LTEP +GSD +L T A V+GG++L G K WI N
Sbjct: 143 AFGTEAQKQKYLPKLARGEWIGCFGLTEPNHGSDPGSLATRARAVQGGYVLSGAKMWITN 202
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
S ADV V++A++ QI G+++ K GL + K+GLR G+I++ +VF P+E
Sbjct: 203 SPIADVFVVWAKD-DGGQIRGFILDKGMKGLEAPAVHGKVGLRASLTGEIVMDEVFCPEE 261
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ P V + L +R +AW +G + + +Y+ +R QFG PLAA Q+ Q+
Sbjct: 262 NAFPEVRGLKGPFTCLNSARYGIAWGALGAAEDCFHRARQYVLDRPQFGRPLAANQLIQK 321
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
KL M I + RL ++ ++G S+ K ++ E + R+++GGNGI
Sbjct: 322 KLADMQTEITLGLQGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLEIARMARDMMGGNGI 381
Query: 389 LSDFLVAK 396
+F VA+
Sbjct: 382 SDEFGVAR 389
>gi|404216700|ref|YP_006670921.1| Acyl-CoA dehydrogenase [Gordonia sp. KTR9]
gi|403647499|gb|AFR50739.1| Acyl-CoA dehydrogenase [Gordonia sp. KTR9]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 187/362 (51%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + D LL ++E A+R VR+ ++ P +A+++ +A+ P I + LG L
Sbjct: 4 PSTLPQLFALDSLLDADEIAIRENVRDFAASKLRPHIADWFSEAQLPVREIARELGELGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G + GYGCPG S +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLDGYGCPGMSAMSYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ S + T A + W+L G K WI N + ADV V++A+
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPSGMRTHAKRDGEDWVLNGTKMWITNGSIADVAVVWAQ 183
Query: 221 NTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++V D PG + +I K+ LR +++ V +P LPG
Sbjct: 184 TDLADSPGGIRGFVVPTDTPGFSAPEITKKMSLRASVTSELVFDDVRLPASAMLPGAEGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + + IG + ++ Y + R+ F PLA +QI Q K+ M +
Sbjct: 244 RGPLTALGEARFGIIFGAIGAARDCLEVAIDYAQSREVFDKPLAGYQITQTKIADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G +TP S+GK T RE +A+ RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGELTPEQVSVGKLNST---REAIAIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|262281483|ref|ZP_06059263.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
gi|262257071|gb|EEY75809.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
Length = 406
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + HRY +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHRYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QIALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|357393066|ref|YP_004907907.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
gi|311899543|dbj|BAJ31951.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
Length = 392
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 177/342 (51%), Gaps = 3/342 (0%)
Query: 56 TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTIKGYGCPGHS 114
T +E+ +R VR ++ + P +A+++E FP + P+LG L V G ++GYGC G +
Sbjct: 20 TEDERLIRDSVRAFTDRHVRPGLADWYEAGTFPVRELAPELGKLGVLGMHLEGYGCTGST 79
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
T +A E+ D+ +F+ V SLAM +I GSEEQK ++LP LA + C+ L
Sbjct: 80 ATEYGVACMELEAADSGLRSFVSVQGSLAMRSIHAFGSEEQKLRWLPELAAGQAVGCFGL 139
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKK 234
TEP GSD +++ T A + W+L+G K WI N + +DV V++A T + G+LV +
Sbjct: 140 TEPEAGSDPASMRTRARRDGTDWVLDGAKAWITNGSVSDVAVVWA--ATEEGVRGFLVPR 197
Query: 235 DAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQ 294
PG T I K+ LR ++ V +P LP + L +R + W
Sbjct: 198 GTPGFTARDIPGKLSLRASVTSELAFDGVRLPAGAMLPLARGLRAPLSSLGEARYGILWG 257
Query: 295 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354
+G + Y +Y ++R QFG P+ FQ+ Q KLV+M ++ LV R+ +L ++G
Sbjct: 258 TVGAARDCYRTAVQYARDRVQFGRPIGGFQLTQAKLVEMALELEKAYLVAVRIGRLKDEG 317
Query: 355 AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
H S GK A E R +LG NGI + + V +
Sbjct: 318 RAQSAHISFGKLNNVRTALEIARSARTILGANGITTAYPVLR 359
>gi|451936831|gb|AGF87143.1| acyl-CoA dehydrogenase domain protein [uncultured organism]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 5/359 (1%)
Query: 42 PPCASDYYQ---FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
P A D+ D LT E+ VR R ++++ P + + ++G L
Sbjct: 4 PRAAFDWQDPLLLDTQLTETERLVRDTARAYAQEKLQPRAQHAFRHEHTDPAIFREMGEL 63
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G TI + YG G + + EI VD+ + + V SSL M+ I G+E QK+
Sbjct: 64 GLLGPTIPEEYGGAGLNYVAYGLIAREIEYVDSGFRSMMSVQSSLVMVPIHEFGTEAQKR 123
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
KYLP LA+ I C+ LTEP +GSD + + A +VEGG++L G K WI NS ADV V+
Sbjct: 124 KYLPKLARGEWIGCFGLTEPNHGSDPGGMESRARRVEGGYLLSGNKMWITNSPIADVFVV 183
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ QI G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V
Sbjct: 184 WAKDDE-GQIRGFILEKGWKGLSAPVIHGKVGLRTSVTGEIVMDEVFVPEENAFPEVRGL 242
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + Y+ Y+ ERKQFG PLAA Q+ Q+KL M I
Sbjct: 243 KGPFTCLNSARFGIAWGALGAAQACYETARNYVLERKQFGRPLAANQLIQKKLADMCTEI 302
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++G SL K +A + R++LGGNGI ++ VA+
Sbjct: 303 ALGLQTVLRIGRMKDEGIAAVELTSLVKRNSCGKALDIARTARDMLGGNGISDEYCVAR 361
>gi|296271318|ref|YP_003653950.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
bispora DSM 43833]
gi|296094105|gb|ADG90057.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
43833]
Length = 385
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 178/352 (50%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP-FHVIPKLGALRVAGGTI 105
D + DD LT E + +R VR + + + P + E++E+ FP + P+LG+L + G +
Sbjct: 3 DLLELDDQLTPEHRMIRDTVRRFVSERVLPHVGEWFERGVFPGRELAPELGSLGLLGMHL 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G +A E+ D+ +F+ V SLAM I GSEEQKQ++LP LA
Sbjct: 63 EGYGCAGLDAISYGVACRELEAGDSGLRSFVSVQGSLAMFPIWKYGSEEQKQEWLPRLAS 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A + G WIL G K WI N + ADV V++A+ T
Sbjct: 123 GEAIGCFGLTEPDHGSDPGSMRTYAKQDPSGDWILNGSKMWITNGSIADVAVVWAQ--TD 180
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++V PG + +I K+ LR + V +P LPGV + L
Sbjct: 181 SGIRGFIVPASTPGFSAQEIHRKLSLRASVTSSLHFDDVRLPASAVLPGVTGLKGPLSCL 240
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y + R QFG P+ AFQ+ Q+KL M + L
Sbjct: 241 TEARYGILWGVVGAARACLEAAVDYARTRIQFGKPIGAFQLTQRKLAWMAVALGQAGLTA 300
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L E G + P S GK A + R +LG NGI ++ V +
Sbjct: 301 LHLGRLKEAGRLKPRQVSFGKLANVRAALDIAREARSILGANGITLEYPVIR 352
>gi|126665775|ref|ZP_01736756.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
gi|126629709|gb|EBA00326.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
Length = 388
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 188/355 (52%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D QFD L E+ VR +R ++ + P + E +F + +G L + G T+
Sbjct: 7 DDLLQFDKQLDETERQVRDSIRSFCDQRLMPGIIEANRHEKFDRSIFTDMGELGMLGATL 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD++ + + V SSL M I G E K++ LP LA
Sbjct: 67 PEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSFGQEALKKRVLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD S + T A KV+GG+++ G K WI NS ADV VI+A+
Sbjct: 127 SGELVGCFGLTEPNHGSDPSGMETRAKKVDGGYLVSGSKTWITNSPIADVFVIWAK--LD 184
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+++++ A GL KIE K LR + G I + VF PDE++L V+ + L
Sbjct: 185 GKVTGFVLERGAKGLDTPKIEGKFSLRASETGSIFMDDVFCPDENKLD-VDGLKGPFSCL 243
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + + Y ERKQFG PLAA Q+ Q+KLV M +I +
Sbjct: 244 NKARYGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTDIALGLQGA 303
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L +L + G +P SL K ++ + + R++ GGNGI ++ V + +M
Sbjct: 304 LQLGRLMDAGEASPDAISLMKRNNCGKSLDIARVARDMHGGNGISDEYHVIRHVM 358
>gi|330815686|ref|YP_004359391.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327368079|gb|AEA59435.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 189/349 (54%), Gaps = 3/349 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D L +E+ VR + + ++AP + E + + ++G + + G TI + YG
Sbjct: 14 LDQQLADDERMVRDAAQAYAQGKLAPRVTEAFRHERTDATIFREMGEIGLLGPTIPEQYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
PG + + E+ R+D+ + + V SSL M+ I GSE QKQKYLP LA I
Sbjct: 74 GPGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPIFEFGSEAQKQKYLPKLASGEWI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQI 227
C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I
Sbjct: 134 GCFGLTEPNHGSDPGSMVTRAKKVAGGYALSGAKMWITNSPIADVFVVWAKLDEDGKDTI 193
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G++++K GL+ I K+GLR G+I+L +VFVP+E+ LP V+ + L +
Sbjct: 194 RGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLLPEVSGLRGPFTCLNSA 253
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL
Sbjct: 254 RYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLVQKKLADMQTEITLGLQGVLRL 313
Query: 348 CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 GRMKDEGTAAVEITSIVKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|352104863|ref|ZP_08960583.1| glutaryl-CoA dehydrogenase [Halomonas sp. HAL1]
gi|350598648|gb|EHA14759.1| glutaryl-CoA dehydrogenase [Halomonas sp. HAL1]
Length = 392
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 189/357 (52%), Gaps = 8/357 (2%)
Query: 48 YYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
++ +DD LT EE+ +R + ++ + P + + + F ++ ++G L +
Sbjct: 3 HFNWDDPLLLEQQLTDEERQIRDAAYDYCQENLQPRVLTAFREERFDREIMTEMGELGLL 62
Query: 102 GGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G T+ YG G + + E+ RVD+ + + V SSL M I GSEEQKQK+L
Sbjct: 63 GATVSPEYGGAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIETYGSEEQKQKFL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA + C+ LTEP +GSD + T A KV+GG+ L G K WI NS AD+ V++A+
Sbjct: 123 PKLASGEMVGCFGLTEPDHGSDPGNMITRAEKVDGGYRLTGAKMWITNSPIADIAVVWAK 182
Query: 221 NTTT-NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+ NQI G++V++ G T KIE K+ LR G+I+L FVP+E+ LP V+ +
Sbjct: 183 SAAHYNQIKGFIVERGTEGFTTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNVSGLKG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW +G S + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 243 PFGCLNKARYGIAWGVMGTSEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEITL 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++ +L + G P SL K +A + R++ GGNG+ ++ V +
Sbjct: 303 GLQAALQVGRLMDSGNWAPEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIR 359
>gi|241666659|ref|YP_002984743.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862116|gb|ACS59781.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 395
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LTSEE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ +VD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIETFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|75674806|ref|YP_317227.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
gi|74419676|gb|ABA03875.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
Length = 404
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 7/367 (1%)
Query: 37 PASKFPPCA-----SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
P SK P D ++ DD LT +E+ +R R + ++ P + + ++ + +
Sbjct: 5 PQSKDKPAPVSFQWDDPFRLDDQLTEDERMIRDTARAYAQDKLLPRIVKAYQDEKTDREI 64
Query: 92 IPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++G L + G T+ + YGC S + EI RVD+ + V SSL M I
Sbjct: 65 FNEMGELGLNGITLPQEYGCADASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAY 124
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
G E Q++KYLP LA + C+ LTEP GSD + + A KV G+ L G K WI N+
Sbjct: 125 GDENQRKKYLPRLATGEWVGCFGLTEPDAGSDPGGMKSRAEKVSDGYRLTGSKTWISNAP 184
Query: 211 FADVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
AD+ V++AR+ NQI G++++K GL+ KI K+ LR G+I++ V VP+E+
Sbjct: 185 IADLFVVWARSAAHDNQIRGFVLEKGMKGLSAPKIGGKLSLRASVTGEIVMDGVVVPEEN 244
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
LP V+ + L +R ++W +G + Y+ ERKQFG PLAA Q+ Q+K
Sbjct: 245 LLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCMHRARTYVLERKQFGRPLAAAQLVQKK 304
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L M +I + R+ +L ++G MTP S+ K +A + R++ GGNGI
Sbjct: 305 LADMQTDIALGLQATLRIGRLMDEGRMTPEMISIIKRNNCGKALDIARAARDMHGGNGIQ 364
Query: 390 SDFLVAK 396
++ V +
Sbjct: 365 IEYHVMR 371
>gi|167720971|ref|ZP_02404207.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
DM98]
Length = 395
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPVIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|149371980|ref|ZP_01891299.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
gi|149355120|gb|EDM43681.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
Length = 392
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 184/356 (51%), Gaps = 2/356 (0%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
A DYY DDLLT E + +R R ++++++PI+ E + A+FP +IP L + G
Sbjct: 8 APDYYNIDDLLTEEHKLIRDAARAWVKRDVSPIIEEAAQAAKFPKSIIPGLADIGAFGPY 67
Query: 105 IKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I YG G + + EI R D+ + V SSL M I G+EEQ+ KYLP L
Sbjct: 68 IPTEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGNEEQRNKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I + LTEP +GS+ + T + ++L G K WI NS F D+ V++A+N
Sbjct: 128 ASGEWIGSFGLTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNSPFCDIAVVWAKNEE 187
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + NK LR G+++ + V VP E+ LP +
Sbjct: 188 -GRIHGLVVERGMEGFSTPETHNKWSLRASATGELIFQDVKVPKENLLPNKSGLGAPLGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG +M YD RY KER QFG P+ FQ+ Q+KL +M+ I L+
Sbjct: 247 LDSARYGIAWGVIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLL 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L + T S+ K A + R++LGG GI ++ + + +M
Sbjct: 307 CLRLGQLKNEDKATSAQISMAKRNNVDMALKIARDARQILGGMGISGEYSIMRHMM 362
>gi|308178000|ref|YP_003917406.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307745463|emb|CBT76435.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 399
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 185/346 (53%), Gaps = 7/346 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY Q L ++ + R+ E EI P++ E+WE +P ++ ++G L +
Sbjct: 18 DYLQAFGALDHADRVHWARARQYGE-EILPVINEHWENGHYPLDLVRRMGQLDL---FTD 73
Query: 107 GYGCPGH---SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
G PGH S A + E++R D S + V L + ++ L G+ Q+++YL +
Sbjct: 74 GLQIPGHAHFSALAAGLVAMELSRADGSMAAAAAVQGGLVLRSLRLFGTPAQQEQYLEPV 133
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + +ALTEP +GSD+ L ++A K GWIL G K+WIGN + +++AR+
Sbjct: 134 ATGQLLGGFALTEPHHGSDSVGLESSARKDGDGWILNGNKKWIGNGAAGGITLVWARDEA 193
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+Q+ G++V++ A G + K LR ++ +I L V VPD RL V SF+D SK
Sbjct: 194 DSQVKGFIVEQQAEGYEAVPVRGKGVLRAIEQAEIRLTDVRVPDSARLSEVASFKDVSKA 253
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +RV V W +G + V++ +Y K+R QFG PL A Q+ Q++L QML I M L
Sbjct: 254 LVATRVNVGWSALGHAQFVFEAALQYAKQRSQFGKPLGAHQMVQERLAQMLAEITNMQLQ 313
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
+ + E GA+ ASL K T AR A R++LGGNGIL
Sbjct: 314 CAAVAAVQEAGALKDTQASLLKYHNTRAARRVAATARDMLGGNGIL 359
>gi|71279950|ref|YP_271311.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
gi|71145690|gb|AAZ26163.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
Length = 394
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 184/351 (52%), Gaps = 1/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +D L+ +E+ VR ++E+ P + +F +++ + G L + G TI
Sbjct: 11 DILLLNDQLSEDERMVRDMAHTFCQEELMPGVLMANRNEDFDPNIMRQFGELGLLGATID 70
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + + E+ RVD+ + + V SSL M I G+ EQK+KYLP LA
Sbjct: 71 GYGCSGVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPINAYGTTEQKEKYLPKLATG 130
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-N 225
I C+ LTEP GSD S++ T A KV+GG+ L G K WI NS ADV V++A+N N
Sbjct: 131 EYIGCFGLTEPGSGSDPSSMITRAKKVDGGYRLTGSKMWITNSPIADVFVVWAKNEAEGN 190
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
QI G++++K GL+ KIE KI LR G+I++ VFVP+E+ P + L
Sbjct: 191 QICGFVLEKGMAGLSAPKIEGKISLRTSITGEIVMDNVFVPEENMFPEIRGLAGPFGCLN 250
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
++R ++W +G + + +Y +R QF PLA Q+ Q KL M I +
Sbjct: 251 MARYGISWGALGAAEFCWHGARQYGLDRIQFKRPLAQTQLFQTKLANMQTEISLGLQASL 310
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ + P S+ K ++ + + R++ GGNGI +F V +
Sbjct: 311 RVGRIIDTKKWDPTMISMVKRNNCGKSLDIARMARDMHGGNGISDEFHVIR 361
>gi|409440412|ref|ZP_11267424.1| glutaryl-CoA dehydrogenase [Rhizobium mesoamericanum STM3625]
gi|408748014|emb|CCM78608.1| glutaryl-CoA dehydrogenase [Rhizobium mesoamericanum STM3625]
Length = 395
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT EE+ V+ + ++AP + E + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTDEERMVQETAHAYAQDKLAPRVLEAFRHEKTDPKIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 71 APEYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDAFGSEVQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPNHGSDPGSMVTRARKVDGGYRLTGAKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GVIRGFILEKGWTGLSAPAIHGKVGLRASITGEVVMDNVFVPEENLLPNVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y+ +R QFG PLAA Q+ Q+KL M+ I +
Sbjct: 250 NSARFGIAWGALGAAEDCYAKARQYVLDRNQFGRPLAANQLIQKKLADMITEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEDGHPPVELTSVVKRNSCGKALDIARLARDMLGGNGISDEFGIAR 361
>gi|424864931|ref|ZP_18288823.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86B]
gi|400759122|gb|EJP73309.1| glutaryl-CoA dehydrogenase [SAR86 cluster bacterium SAR86B]
Length = 385
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 182/353 (51%), Gaps = 1/353 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D FDD LT +E ++ + + ++ P + E F + ++G + G I
Sbjct: 5 DILLFDDQLTEDELTIKNSAHDYCQDKLMPRILEANRNEIFDKEIYQEMGQMGFLGAPID 64
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + + EI RVD+S + V +SLAM I GSEEQK YLP +A+
Sbjct: 65 GYGCAGVNYVSYGLIAREIERVDSSYRSAFSVQTSLAMHAIYKFGSEEQKNHYLPEMAKG 124
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
N I C+ LTEP GSD +++ T A K + G++L G K WI N+ ADVL+I+A++
Sbjct: 125 NLIGCFGLTEPDAGSDPASMKTNAKKTKDGYLLNGSKTWITNAPIADVLIIWAKD-EQGI 183
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++V ++ GL+ +E K LR G I L V V ++ LP V SF+ L +
Sbjct: 184 LRGFIVDREVKGLSTPTLEGKFALRASVTGQIFLDDVLVGEDKILPEVQSFRGPFSCLNM 243
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R +AW IG + ++ Y ER QF PLA+ Q+ Q+KL M I + R
Sbjct: 244 ARYGIAWGSIGAAEFCWNASLEYSIERSQFNKPLASKQLIQKKLADMQTEITLGLQTVLR 303
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ M P SL K +A + R++ GGNGI ++ V + M
Sbjct: 304 VGRLIDEDQMQPEMISLVKRNNCQKALDIARTARDIHGGNGIADEYHVIRHAM 356
>gi|385333677|ref|YP_005887628.1| acyl-CoA dehydrogenase [Marinobacter adhaerens HP15]
gi|311696827|gb|ADP99700.1| acyl-CoA dehydrogenase domain protein [Marinobacter adhaerens HP15]
Length = 389
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 192/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D FD L E+ VR +R ++++ P + E +F + ++G L + G T+
Sbjct: 7 NDLLGFDAQLDETERQVRDSIRSFCDEQLMPGITEANRHEKFDRSIFNQMGELGMLGATL 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD++ + + V SSL M I G E K++ LP LA
Sbjct: 67 PEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSYGKEAMKKRILPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD S + T A KV+GG++L G K WI NS ADV V++A+
Sbjct: 127 SGEYVGCFGLTEPNHGSDPSGMETRAKKVDGGYLLSGSKTWITNSPIADVCVVWAK--LD 184
Query: 225 NQINGYLVKKD-APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
++NG++++++ A GL KI+ K LR + G I + +VFVPDE+ L V +
Sbjct: 185 GKVNGFVIEREGATGLETPKIQGKFSLRASETGSIFMDEVFVPDENHLE-VEGLKGPFSC 243
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + Y ERKQFG PLAA Q+ Q+KLV M I +
Sbjct: 244 LNKARFGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTEITIGLQA 303
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ + G +TP SL K +A + + R++ GGNGI ++ V + +M
Sbjct: 304 VLQLGRMMDAGTVTPDAISLLKRNNCGKALDIARVARDMHGGNGIADEYHVIRHVM 359
>gi|402567463|ref|YP_006616808.1| acyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402248660|gb|AFQ49114.1| acyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 395
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 187/345 (54%), Gaps = 3/345 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT EE+ VR + ++AP + E + + ++G + + G TI + YG PG
Sbjct: 18 LTEEERMVRDAAHAYAQDKLAPRVTEAFRHERTDAEIFREMGEVGLLGPTIPEEYGGPGL 77
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA I C+
Sbjct: 78 NYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSDAQKQKYLPKLASGEWIGCFG 137
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYL 231
LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ + I G++
Sbjct: 138 LTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVWAKLEENGKDAIRGFI 197
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
++K GL+ I K+GLR G+I+L VFVP+E+ +P V+ + L +R +
Sbjct: 198 LEKGWKGLSAPTIHGKVGLRASITGEIVLDDVFVPEENLMPNVSGLRGPFTCLNSARYGI 257
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 258 AWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMK 317
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 318 DEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 362
>gi|325953837|ref|YP_004237497.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
gi|323436455|gb|ADX66919.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
Length = 387
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 190/349 (54%), Gaps = 4/349 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK-AEFPFHVIPKLGALRVAGGT 104
+DY+ D+LLT E +R VR+ + +EI P++ E+ + E P +++ KLGA+ G
Sbjct: 5 TDYFNIDELLTEEHLLIRDSVRKFVNEEIKPVIDEHAQNHTEIP-NLMKKLGAIGALGPY 63
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + E+ D++ + V SSL M I GSEEQK+KYLP L
Sbjct: 64 IPEEYGGAGLDQISYGLIMQELEAGDSAVRSAASVQSSLVMYPIFTYGSEEQKRKYLPKL 123
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GS+ + + T K +IL G K WI N+ D+ V++ARN
Sbjct: 124 ASGEMIGCFGLTEPNHGSNPAGMETKLKKEGDHYILNGAKMWITNAPICDIAVVWARNEE 183
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I+G +V++ G + + K LR + G+++ + V +P E+ LPGVNS +
Sbjct: 184 -GKISGVIVERYMEGFSTPETMQKWSLRASRTGELVFENVKIPAENILPGVNSLRGPLSC 242
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W IG ++ Y++ +Y ER QFG P+A++Q+ Q+KL + + I L+
Sbjct: 243 LNSARYGISWGAIGAAIDCYEVALQYSLERTQFGKPIASYQLQQKKLAEFITEITKAQLM 302
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
WRL L + TP S+ K A + R++LG GI+ D+
Sbjct: 303 VWRLGTLKNEDKATPAQISMAKRNSVKIALDIARESRQILGAMGIVGDY 351
>gi|325273964|ref|ZP_08140125.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
gi|324100898|gb|EGB98583.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
Length = 393
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 189/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++GA+ + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQGKLAPRVLEAFRHEQTDPAIFREMGAVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRAKKVEGGYRLSGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|374370799|ref|ZP_09628794.1| glutaryl-CoA dehydrogenase [Cupriavidus basilensis OR16]
gi|373097660|gb|EHP38786.1| glutaryl-CoA dehydrogenase [Cupriavidus basilensis OR16]
Length = 397
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 194/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D DD L+++E+ VR + ++AP + + + + + ++G L + G TI
Sbjct: 10 ADPLLLDDQLSADERMVRDAALAYCQDKLAPRVLQSFRNEKTDIEIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEEYGGPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++ + +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMITRAKKVAGGYELSGAKMWITNSPIADVFVVWGKLVGD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ +VFVP+E+ +PGV+ +
Sbjct: 190 DGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVMDQVFVPEENLMPGVSGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|398809625|ref|ZP_10568470.1| acyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398085348|gb|EJL76007.1| acyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 399
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT EE+ +R ++ +AP + E + E + ++GAL + G TI
Sbjct: 11 DPLLLDQQLTDEERMIRDAANAYCQERLAPRVIEGFRTGETDPAIFREMGALGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + E+ RVD+ + V SSL M+ I G+E QKQKYLP LA
Sbjct: 71 EQYGGPGLNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIFEFGTEGQKQKYLPKLAT 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT--- 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 131 GEWIGCFGLTEPDHGSDPGSMATRAKKVPGGYSLSGSKMWISNSPIADVFVVWAKEVSES 190
Query: 223 -TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T I G++++K GL+ I K+GLR G+I++ VF P+E+ P V +
Sbjct: 191 GTVGPIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDGVFCPEENAFPEVQGLKGPF 250
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 251 TCLNSARYGISWGALGAAEDCWHRARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGL 310
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K ++ + + R+++GGNGI +F VA+
Sbjct: 311 QGSLRLGRMKDEGIAAVEITSIMKRNNCGKSLDIARMARDMMGGNGISDEFGVAR 365
>gi|399546213|ref|YP_006559521.1| glutaryl-CoA dehydrogenase [Marinobacter sp. BSs20148]
gi|399161545|gb|AFP32108.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. BSs20148]
Length = 388
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 189/355 (53%), Gaps = 4/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D QFD L E+ VR +R ++ + P + E +F + +G L + G T+
Sbjct: 7 DDLLQFDKQLDETERQVRDSIRSFCDQRLMPGIIEANRHEKFDRSIFTDMGELGMLGATL 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD++ + + V SSL M I G E K++ LP LA
Sbjct: 67 PEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSFGQEALKKRVLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD S + T A KV+GG+++ G K WI NS ADV VI+A+
Sbjct: 127 SGELVGCFGLTEPNHGSDPSGMETRAKKVDGGYLVSGSKTWITNSPIADVFVIWAK--LD 184
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G+++++ A GL KIE K LR + G I + +VF PDE++L V+ + L
Sbjct: 185 GRVTGFVLERGAKGLHTPKIEGKFSLRASETGSIFMDEVFCPDENKLD-VDGLKGPFSCL 243
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + + Y ERKQFG PLAA Q+ Q+KLV M +I +
Sbjct: 244 NKARYGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTDIALGLQGA 303
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L +L + G +P S+ K ++ + + R++ GGNGI ++ V + +M
Sbjct: 304 LQLGRLMDAGEASPDAISMMKRNNCGKSLDIARVARDMHGGNGISDEYHVIRHVM 358
>gi|353243061|emb|CCA74645.1| probable glutaryl-CoA dehydrogenase [Piriformospora indica DSM
11827]
Length = 396
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 187/362 (51%), Gaps = 1/362 (0%)
Query: 38 ASKFPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
ASKF P D + LL+ EE AVR +E ++++ P + + + F ++ ++G
Sbjct: 4 ASKFVPYNHEDPLNLESLLSEEEIAVRDTAKEYCQEKLLPRVLDAYRTEGFDASILKEMG 63
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
+L + G TIKGYGC G S + E+ RVD+ + + V SSL M I G+EEQK
Sbjct: 64 SLGLLGATIKGYGCAGVSSVAYGLIAREVERVDSGYRSTMSVQSSLVMHPINTFGTEEQK 123
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
+KYLP LA+ I C+ LTEP GSD + + TTA K G++L G K WI N+ AD+ V
Sbjct: 124 EKYLPLLAKGELIGCFGLTEPNNGSDPAGMETTAVKKGDGYVLNGSKTWITNAPVADLFV 183
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
++AR ++ G+L++K GLT I+NK+ LR G I L V P LP +
Sbjct: 184 VWARCQWDGKVRGFLLEKGMEGLTAPAIKNKLALRASLTGSIFLDNVHAPSTSLLPHGSG 243
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
L +R ++W +G D Y ERKQF P+A+FQ+ Q+KL
Sbjct: 244 LGAPFSCLNNARYGISWGVMGALEDCLDRARTYALERKQFKKPIASFQLVQKKLADAHTE 303
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + ++ +L ++GA P SL K +A + ++LGGN ++ + +
Sbjct: 304 VALGLGASLQVGRLKDQGAWAPEMVSLVKRNNCGKALMHARILLDVLGGNACSDEYHIGR 363
Query: 397 VI 398
+
Sbjct: 364 HV 365
>gi|167744512|ref|ZP_02417286.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 14]
gi|254299046|ref|ZP_04966496.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
406e]
gi|157809078|gb|EDO86248.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
406e]
Length = 395
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI N+ ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNAPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|427423609|ref|ZP_18913758.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-136]
gi|425699633|gb|EKU69241.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-136]
Length = 406
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I GSEEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGSEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|160897650|ref|YP_001563232.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
acidovorans SPH-1]
gi|160363234|gb|ABX34847.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
Length = 398
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 190/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D L+ +E+ +R ++++AP + E + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLSEDERMIRDAAHAYCQEKLAPRVLEMFRHEKTDVSIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E+QK KYLP LA
Sbjct: 69 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEDQKNKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++++ A KV+GG+ L+G K WI NS ADV V++A+ T
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMSSRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVTE 188
Query: 225 N----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I G+++ K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 189 DGHVGEIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVIEITSLIKRNNCGKSLDIARMARDMMGGNGISDEFGVAR 364
>gi|351729214|ref|ZP_08946905.1| glutaryl-CoA dehydrogenase [Acidovorax radicis N35]
Length = 398
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 19/363 (5%)
Query: 49 YQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
+Q+DD LT +E+A++ + ++AP + + + + + ++G + + G
Sbjct: 6 FQWDDPFLLSQQLTDDERAIQAAAAAYCQDKLAPRVLDAFRHEKMDVSIFREMGEVGLLG 65
Query: 103 GTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
TI + YG PG S + E+ RVD+ + V SSL M+ I G+E QKQKYLP
Sbjct: 66 PTIPEQYGGPGLSYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIHEFGTEAQKQKYLP 125
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
LA I C+ LTEP +GSD ++ T A KV+GG+ L+G K WI NS ADV V++A+
Sbjct: 126 KLASGEWIGCFGLTEPDHGSDPGSMATRAYKVDGGYKLKGSKMWITNSPVADVFVVWAKE 185
Query: 222 TT----TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G+++ K GLT I K+GLR G+I++ VFVP+E+ P V
Sbjct: 186 VSEGGAVGPIRGFVLDKGMKGLTAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVQGL 245
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M
Sbjct: 246 KGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADM---- 301
Query: 338 QAMILVGWRLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
Q I +G + C ++ + G + S+ K +A + L R+++GGNGI +F
Sbjct: 302 QTEIAIGLQACLQFGRMKDAGTASVEGTSIIKRNSCGKALDIARLARDMMGGNGISDEFG 361
Query: 394 VAK 396
VA+
Sbjct: 362 VAR 364
>gi|424878313|ref|ZP_18301953.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392520805|gb|EIW45534.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 395
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LTSEE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPGIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ +VD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIETFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|413958815|ref|ZP_11398054.1| acyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413941395|gb|EKS73355.1| acyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 396
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 193/355 (54%), Gaps = 5/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D D LT +E+ VR R + ++ P +M + E+ P + ++G L + G T
Sbjct: 10 EDPLLLDQQLTEDERMVRDAARAYAQDKLQPRVMQAFREEKTDP-AIFREMGELGLLGPT 68
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP L
Sbjct: 69 IPEQYGGPGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINTFGSDAQKEKYLPKL 128
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--N 221
A+ I C+ LTEP GSD +++ T A KV+ G+ L G K WI NS ADV V++A+
Sbjct: 129 ARGEWIGCFGLTEPNAGSDPASMTTRAKKVQNGFSLSGTKMWISNSPIADVFVVWAKLEE 188
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K GL+ I K+GLR G+I++ +VFVP+E+ LP V +
Sbjct: 189 DGRDEIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENMLPNVRGLKGPF 248
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 TCLNSARYGISWGALGAAETCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 QGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|71413730|ref|XP_808993.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70873305|gb|EAN87142.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
Length = 472
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 190/362 (52%), Gaps = 9/362 (2%)
Query: 44 CAS-DYYQFDD--------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
C S +Y +++D LT E +R VRE +K + P + + + + +
Sbjct: 79 CGSFNYAEYNDGDPLLLQEQLTDSEVEIRRVVREFCKKTLLPRVTDAYRNEREDRKIFRE 138
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LGAL V G TI+GYGC G S A + EI +D+ + V SSL M I GS+
Sbjct: 139 LGALGVLGPTIEGYGCAGISSVAAGLISREIEAIDSGYRSAWSVQSSLVMHPIYAFGSDA 198
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP LA I C+ LTEP GSD ++ T A KV GG+ L G K WI ++ AD+
Sbjct: 199 QKQRFLPKLATGELIGCFGLTEPNAGSDPMSMTTRARKVAGGYSLSGCKTWITSAPLADI 258
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A+ TN+I G++V++D G +IE K+ LR G I+L VP+E+ LP
Sbjct: 259 AVVWAKLHDTNKIAGFIVERDFKGFATERIEGKLSLRTSCTGMIVLDNCIVPEENVLPHA 318
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R +AW +G + +++ Y ERKQFG +A+ Q+ Q KL +
Sbjct: 319 TGLKAPFNCLSSARYGIAWGVVGAAETCFNIARDYSLERKQFGKSIASMQLVQAKLADAV 378
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I + R +L ++G ++ S+ K T +A E R++LGGNGI ++ V
Sbjct: 379 TEITLAMQSCLRAGRLKDEGKLSHQVISMLKRNNTRKAIEIARAMRDILGGNGISDEYHV 438
Query: 395 AK 396
+
Sbjct: 439 MR 440
>gi|254818879|ref|ZP_05223880.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
13950]
gi|379749369|ref|YP_005340190.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
13950]
gi|379756689|ref|YP_005345361.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare
MOTT-02]
gi|378801733|gb|AFC45869.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
13950]
gi|378806905|gb|AFC51040.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare
MOTT-02]
Length = 394
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D L+ +E+AVR VRE + + P +AE++E + P + K
Sbjct: 2 STKTPPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKG 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 62 FGQLGLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIWNFGSEE 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP +A + C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV
Sbjct: 122 QKQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLTGRKLWITNGSVADV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T N + G++V G + I +K+ LR +++L V +P E LP
Sbjct: 182 AVVWA--NTDNGVRGFIVPTKTAGFSANTIHHKLSLRASITSELVLDDVRLPAEAMLPEA 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 240 KGLRGPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 300 VELHKGQLLSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 359
Query: 395 AK 396
+
Sbjct: 360 IR 361
>gi|424743086|ref|ZP_18171400.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-141]
gi|422943582|gb|EKU38597.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-141]
Length = 406
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 188/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + + ++G L + G TI
Sbjct: 18 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHEKTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|358635084|dbj|BAL22381.1| glutaryl-CoA dehydrogenase [Azoarcus sp. KH32C]
Length = 395
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 191/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT E+ VR R ++ + P + E + + + ++G L + G TI
Sbjct: 11 ADPLYLDSQLTDTERMVRDTARSYCQERLLPRVQEAFRHEKTDPAIFREMGELGLLGPTI 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I G+E K+KYLP LA
Sbjct: 71 PEEYGGAGMNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGNEATKRKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD +++ T A KV+GG+ L G K WI NS ADV V++A++
Sbjct: 131 TGEWIGCFGLTEPNHGSDPASMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKDDAG 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V + L
Sbjct: 191 D-IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPTVRGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ +Y +R+QFG PLAA Q+ Q+KL ML I +
Sbjct: 250 NSARFGIAWGALGAAEACYETARQYTLDRQQFGRPLAANQLIQKKLADMLTEITLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 310 LRLGRLKDEGNAPVELTSIMKRNSCGKSLDIARVARDMLGGNGISDEFCIAR 361
>gi|389739399|gb|EIM80592.1| acyl-CoA dehydrogenase domain-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 416
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 183/350 (52%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LT EE A+R R+ ++ +AP + E F ++P +G++ + G TI
Sbjct: 33 DPLNLEGALTDEEVAIRDTARDFCQEYLAPRVIEAHRTENFDKSILPAMGSVGLLGPTID 92
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S + EI RVD+ + V SSL M I G++ QK K+LP LA+
Sbjct: 93 GYGCAGVSNVAYGLIAREIERVDSGYRSTASVQSSLVMHPIHTFGTQAQKDKFLPGLAKG 152
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 226
+ C+ LTEP +GSD + + T A +V+GG+++ G K WI N+ ADV +++AR N+
Sbjct: 153 ELVGCFGLTEPNHGSDPAGMETVAEEVDGGFVINGSKTWISNAPVADVFIMWARCKWDNR 212
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAV 286
+ G++++K GL+ KI NK+ LR+ G I + V VP + +P L
Sbjct: 213 VRGFILEKGMNGLSAQKIPNKLALRVSTTGSIFMDSVKVPHDALMPDAIGLGAAFSCLNS 272
Query: 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWR 346
+R ++W +G + Y +R QF PLA+FQ+ Q KLV++ I + R
Sbjct: 273 ARFGISWGVMGALEDCLNTARTYALDRHQFSRPLASFQLVQAKLVKVQTEIALGLHASLR 332
Query: 347 LCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ +L ++G + P S+ K +A E + ++LGGN ++ + +
Sbjct: 333 VGRLKDEGKLVPEMVSMVKRNNCGKALEGARMLVDVLGGNACSDEYSIGR 382
>gi|398838729|ref|ZP_10595998.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM102]
gi|398856908|ref|ZP_10612620.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM79]
gi|398899971|ref|ZP_10649253.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM50]
gi|398114914|gb|EJM04710.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM102]
gi|398181881|gb|EJM69425.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM50]
gi|398242082|gb|EJN27710.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM79]
Length = 393
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R ++ ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAQQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPDHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|83312330|ref|YP_422594.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
gi|82947171|dbj|BAE52035.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
Length = 392
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 188/353 (53%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + +D L+ +E+ +R ++++ P + + + F ++ ++G + + G TI
Sbjct: 7 DDPFLLEDQLSEDEKLIRDSAHAYCQEKLQPRVMKAFRDETFDREIMNEMGEMGLLGPTI 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M I G+EEQK+KYLP LA
Sbjct: 67 PEEYGGPGVNHVAYGLISREVERVDSGYRSAMSVQSSLVMHPIFSYGTEEQKKKYLPRLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
I C+ LTEP GSD + T A KV+GG++L G K WI NS +D+ +++A+ +
Sbjct: 127 TGEIIGCFGLTEPDAGSDPGGMRTRAKKVDGGYLLTGSKMWITNSPISDIAIVWAKSDAH 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++V+K G T KIE K+ LR G+I+L + FVPDE +P +
Sbjct: 187 EGKIKGFIVEKGIKGFTTPKIEGKLSLRASITGEIVLDEAFVPDEALMPNASGLGGPFGC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW IG + + +Y+ +RKQFG PLAA QI Q KL M+ I +
Sbjct: 247 LNKARYGIAWGVIGAAEFCWHAARQYMLDRKQFGRPLAANQIPQLKLANMMTEITLGLQA 306
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ + P SL K +A + + R++ GGNGI +F V +
Sbjct: 307 CVRVGRMMDDHTWAPEAVSLIKRNNCGKALDIARMARDMHGGNGISEEFHVIR 359
>gi|319943206|ref|ZP_08017489.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
gi|319743748|gb|EFV96152.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
Length = 395
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D L+ E+ V+ R + ++ P + E + + + ++G L + G TI
Sbjct: 11 ADPLLLDAQLSDTERMVQDSARAYCQDKLLPRVQEAFRHEKTDVSIFREMGELGLLGPTI 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SL M+ I G+EEQKQKYLP LA
Sbjct: 71 AEEYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQGSLVMVPIEAFGTEEQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A++
Sbjct: 131 TGELIGCFGLTEPNHGSDPGSMVTRARKVEGGYSLSGAKTWITNSPIADVFVVWAKDDE- 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
QI G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V + L
Sbjct: 190 GQIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPEVRGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ +Y +RKQF PLAA Q+ Q+KL M I +
Sbjct: 250 NSARYGIAWGALGAAEACYEAARQYTLDRKQFNRPLAANQLIQKKLADMATEISLGLQAV 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ ++ ++G S+ K +A + + R++LGGNGI ++ VA+
Sbjct: 310 LRVGRMKDEGIAPVEVTSIVKRNSCGKALDIARMARDMLGGNGISDEYPVAR 361
>gi|387016148|gb|AFJ50193.1| Glutaryl-CoA dehydrogenase, mitochondrial-like [Crotalus
adamanteus]
Length = 430
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 190/370 (51%), Gaps = 6/370 (1%)
Query: 35 ATPASKFPPCASDY---YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
+ P K P D+ Q + LLT EE +R R ++++ P + F +
Sbjct: 29 SAPVPKVPKAQFDWRDALQLERLLTQEEIMMRDSFRAYCQEKLMPRILMANRNEVFHREI 88
Query: 92 IPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG 151
+ ++G L V G TIKGYGC G + + EI RVD+ + + V SSL M I G
Sbjct: 89 VSEMGTLGVLGPTIKGYGCAGTTYVAYGLLAREIERVDSGYRSVMSVQSSLVMHPIYAYG 148
Query: 152 SEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNS 209
+EEQKQKYLP LA+ + C+ LTEP +GSD ++ T A + L G K WI NS
Sbjct: 149 TEEQKQKYLPGLAKGELLGCFGLTEPNHGSDPGSIETRAQYNPSRKTYTLNGSKTWITNS 208
Query: 210 TFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
AD+ V++A +I G+L+++ GL+ KIE K LR G I+++ V VP+E+
Sbjct: 209 PMADLCVVWA-VCDDGKIRGFLLERGMKGLSTPKIEGKFSLRASLTGMIIMEDVEVPEEN 267
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
LP V+ L +R ++W +G + +Y +R QFGAPLA Q+ Q+K
Sbjct: 268 LLPKVSGLAGPFGCLNNARYGISWGALGAAEFCMHTARQYTLDRNQFGAPLARNQLIQKK 327
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L ML I + +L +L ++ TP S+ K +A E R++LGGNGI
Sbjct: 328 LADMLTEITIGLQACLQLGRLKDEDKATPEMISMLKRNSCGKALEIARQARDMLGGNGIA 387
Query: 390 SDFLVAKVIM 399
++ V + +M
Sbjct: 388 DEYHVIRHVM 397
>gi|404261156|ref|ZP_10964428.1| glutaryl-CoA dehydrogenase [Gordonia namibiensis NBRC 108229]
gi|403400385|dbj|GAC02838.1| glutaryl-CoA dehydrogenase [Gordonia namibiensis NBRC 108229]
Length = 395
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 187/362 (51%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL ++E A+R VR+ + P + +++E+A+ P I K LG +
Sbjct: 4 PSTLAQLFALDSLLDADEIAIRDTVRDFANARLRPHIGDWFEEAKLPAREIAKELGQIGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLEGYGCPGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ S + T A + G W+L G K WI N + ADV V++A+
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPSGMRTNAKRDGGDWVLNGTKMWITNGSIADVAVVWAQ 183
Query: 221 NTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++V D PG + +I K+ LR +++L V +P+ LP
Sbjct: 184 TDLADSPAGIRGFVVPTDTPGFSAPEIHKKMSLRASVTSELVLDNVRLPESAMLPKAEGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + + IG + + Y + R+ F PLA +QI Q K+ M +
Sbjct: 244 RGPLTSLSEARFGIIFGAIGAARDCLETAIDYSQSREVFEKPLAGYQITQTKIADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G + P S GK RE + + RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGEIRPEQISTGK---LNNTREAIKIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|220921271|ref|YP_002496572.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219945877|gb|ACL56269.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
ORS 2060]
Length = 413
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 195/375 (52%), Gaps = 9/375 (2%)
Query: 31 AFPQATPASKFPPCAS-------DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWE 83
A PQ +P++ P S D + +D LT EE+ +R R + + P + E +
Sbjct: 6 AAPQTSPSAARPQEGSRGAFRWDDPFLLEDQLTDEERLIRDTARSFAVERLLPGIVEAYA 65
Query: 84 KAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142
+ + ++ +G L + G T+ + YGC G S + E+ RVD+ + + V SSL
Sbjct: 66 EEKTDRNLFNAMGELGLLGVTLPEEYGCAGASYVAYGLVAREVERVDSGYRSMMSVQSSL 125
Query: 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202
M I G E Q++ YLP LA + C+ LTEP GSD + T A K++GG++L G
Sbjct: 126 VMYPIYAYGDETQRKTYLPGLASGELVGCFGLTEPDAGSDPGGMKTRAKKIDGGYLLSGV 185
Query: 203 KRWIGNSTFADVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLK 261
K WI N+ ADV V++A++ NQI G++++K GL+ KI+ K+ LR G+I++
Sbjct: 186 KTWISNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKIKGKLSLRASVTGEIVMD 245
Query: 262 KVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLA 321
V VP+ LP V+ + L +R ++W +G + + +Y +R QFG PLA
Sbjct: 246 GVEVPESALLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCWHRARQYTLDRTQFGRPLA 305
Query: 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 381
Q+ Q+KL M I + R+ +L+++G + P S+ K +A R+
Sbjct: 306 QTQLVQRKLADMQTEIALGLQASLRVGRLFDEGRVAPEMISIVKRNNCGKALAIAREARD 365
Query: 382 LLGGNGILSDFLVAK 396
+ GGNGI+ ++ V +
Sbjct: 366 MHGGNGIMGEYHVMR 380
>gi|71655817|ref|XP_816465.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881596|gb|EAN94614.1| hypothetical protein Tc00.1047053510121.40 [Trypanosoma cruzi]
Length = 472
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 190/362 (52%), Gaps = 9/362 (2%)
Query: 44 CAS-DYYQFDD--------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
C S +Y +++D LT E +R VRE +K + P + + + + +
Sbjct: 79 CGSFNYAEYNDGDPLLLQEQLTDSEVEIRRVVREFCKKTLLPRVTDAYRNEREDRKIFRE 138
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LGAL V G TI+GYGC G S A + EI +D+ + V SSL M I GS+
Sbjct: 139 LGALGVLGPTIEGYGCAGISSVAAGLISREIEAIDSGYRSAWSVQSSLVMHPIYAFGSDA 198
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP LA I C+ LTEP GSD ++ T A KV GG+ L G K WI ++ AD+
Sbjct: 199 QKQRFLPKLATGELIGCFGLTEPNAGSDPMSMTTRARKVAGGYSLSGCKTWITSAPLADI 258
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A+ TN+I G++V++D G +IE K+ LR G I+L VP+E+ LP
Sbjct: 259 AVVWAKLHDTNKIAGFIVERDFKGFATERIEGKLSLRTSCTGMIVLDNCIVPEENVLPHA 318
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R +AW +G + +++ Y ERKQFG +A+ Q+ Q KL +
Sbjct: 319 TGLKAPFNCLSSARYGIAWGVVGAAETCFNIARDYSLERKQFGKSIASMQLVQAKLADAV 378
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I + R +L ++G ++ S+ K T +A E R++LGGNGI ++ V
Sbjct: 379 TEITLAMQSCLRAGRLKDEGKLSHQVISMLKRNNTRKAIEIARAMRDILGGNGISDEYHV 438
Query: 395 AK 396
+
Sbjct: 439 MR 440
>gi|378719445|ref|YP_005284334.1| putative acyl-CoA dehydrogenase [Gordonia polyisoprenivorans VH2]
gi|375754148|gb|AFA74968.1| putative acyl-CoA dehydrogenase [Gordonia polyisoprenivorans VH2]
Length = 402
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 189/369 (51%), Gaps = 12/369 (3%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIP 93
T KF A D D + +E AVR VR + + + P +A+++E P +
Sbjct: 5 TSTPKF--SAIDPLNLDLGYSDDELAVRDSVRGFLAEHVTPHIADWFEAGSIPIARDLFK 62
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+ G L V G + GYGC G S +A E+ D+ + + V SLAM +I GSE
Sbjct: 63 QFGQLGVLGMHLDGYGCGGASSAHYGLASLELEACDSGVRSMVSVQGSLAMFSIYNNGSE 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQK ++LPS+A+ T+ C+ LTEP GSD +++ T A + WIL+G+K WI NS AD
Sbjct: 123 EQKNRWLPSMAEGTTVGCFGLTEPDAGSDPASMKTRARRDGDDWILDGRKMWITNSPIAD 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++AR T + G++V D G++ +I++K+ LR G+I+L V +P E +PG
Sbjct: 183 VAVVWAR--TEEGVRGFIVPTDTAGVSTPEIKHKLSLRASTTGEIVLDNVRLPAEALMPG 240
Query: 274 VNSFQDTSKV------LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ + L +R + W IG + + Y +R QFG P+A+FQ+ Q
Sbjct: 241 NDDLHKGQGIKAPLSSLTEARYGIIWGSIGAARTAWQAAVDYATQRTQFGKPIASFQLTQ 300
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
K+ M +Q L+ L +L + + P S GK T A + R +LGGNG
Sbjct: 301 AKIADMALELQKGQLLAQHLGRLKDSVGLRPDQVSFGKLNNTREAIKICRTARTILGGNG 360
Query: 388 ILSDFLVAK 396
I ++ + +
Sbjct: 361 ISLEYPIIR 369
>gi|302865027|ref|YP_003833664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302567886|gb|ADL44088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
Length = 386
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 181/354 (51%), Gaps = 9/354 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D D L+ EE+ +R VR + + P +A ++E + P + + G L + G +
Sbjct: 5 DLLDIDASLSDEERQIRTVVRRLVTDRVRPHIAGWYEDGQVPARELAREFGKLGLLGMHL 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ++LP++A
Sbjct: 65 TGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIWRYGSEEQKQRWLPAMAA 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD +++ T A + WIL G K WI N+ ADV VI+AR T +
Sbjct: 125 GEAIGCFGLTEPDHGSDPASMATRARRDGDDWILNGSKLWITNAPIADVGVIWAR--TDD 182
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+ V D PG+T +I +K+ LR G+I L V +P + RLP + L
Sbjct: 183 GVRGFAVPMDTPGVTAREIRHKMSLRASLTGEIALDDVRLPADARLPEAIGLKAPLGCLT 242
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + + Y R QFG PLA FQ+ Q KL M +L+
Sbjct: 243 EARHGIVWGALGAARDCLETALEYATTRTQFGRPLAGFQLTQAKLADMAVEWNKGMLLAL 302
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L +L + G + P S+GK RE +A+ R+ +LG NG+ ++ V +
Sbjct: 303 HLGRLADAGTLRPDQVSVGK---LNNVREALAIARQCRTILGANGVSGEYPVMR 353
>gi|384100997|ref|ZP_10002051.1| glutaryl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419966223|ref|ZP_14482155.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus M213]
gi|432341119|ref|ZP_19590503.1| glutaryl-CoA dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|383841556|gb|EID80836.1| glutaryl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414568409|gb|EKT79170.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus M213]
gi|430773883|gb|ELB89527.1| glutaryl-CoA dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 390
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 189/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P S + D LL +EE A+R VR +++I P + E++E A P + + LG L V
Sbjct: 4 PQSLSQLFALDSLLDTEEIAIRDTVRRFADEKIRPHIGEWFEAAALPVRELAEGLGELGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSE+QKQ++L
Sbjct: 64 LGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIHHYGSEDQKQEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + + T A + WIL G K WI N + ADV V++AR
Sbjct: 124 PRMAAGTAIGCFGLTEPDFGSNPAGMRTGAKRDGDDWILNGTKMWITNGSVADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + I G++V D PG + +I++K+ LR +++L+ V +P+ LP
Sbjct: 184 --TDDGIRGFVVPTDTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++R+ F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIADMALEVGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G P S GK RE +A+ RE +LG NGI ++ V +
Sbjct: 302 HLLAYHLGRLKDRGVARPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPVIR 357
>gi|406939522|gb|EKD72525.1| hypothetical protein ACD_45C00652G0001 [uncultured bacterium]
Length = 396
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 188/354 (53%), Gaps = 1/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + F++ LT EE+ +R R ++++ P + + F +I ++G G TI
Sbjct: 14 DDPFLFEEQLTEEERMIRDAARAYAQEKLQPRIQVAFHDEFFDREIIREMGQQGFLGATI 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G + + EI RVD++ + + V SSL M I + GSEEQKQK+LP LA
Sbjct: 74 HGYGCAGINYVAYGLLTREIERVDSAYRSALSVQSSLVMHAIYIYGSEEQKQKFLPHLAS 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD + A K+ G++L+G K WI NS AD+ +++A+N
Sbjct: 134 GELVGCYGLTEPNHGSDPGGMEARAKKIAKGYVLKGNKMWITNSPIADIFIVWAKN-DEG 192
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K+ GL+ + K+ +R G+I++ V VP E+ LP + L
Sbjct: 193 RIRGFILEKNMQGLSAPTMHGKMSMRASLTGEIVMDDVLVPAENELPNADGLAGPLGCLD 252
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y+ +R QF PLAA Q+ Q KL +M I +
Sbjct: 253 NARYGIAWGALGAAEFCWHTARQYVLDRVQFDKPLAANQLIQAKLAKMQTQIALALQACL 312
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++ + SL K T A + R++LG NGI+ +F V + ++
Sbjct: 313 RVGRLKDENRVETPMISLIKRNSTLIALDIAREARDMLGANGIMEEFQVIRHML 366
>gi|315501524|ref|YP_004080411.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
sp. L5]
gi|315408143|gb|ADU06260.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
sp. L5]
Length = 386
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 181/354 (51%), Gaps = 9/354 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D D L+ EE+ +R VR + + P +A ++E + P + + G L + G +
Sbjct: 5 DLLDIDASLSDEERQIRTVVRRLVTDRVRPHVAGWYEDGQVPARELAREFGKLGLLGMHL 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ++LP++A
Sbjct: 65 TGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIWRYGSEEQKQRWLPAMAA 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD +++ T A + WIL G K WI N+ ADV VI+AR T +
Sbjct: 125 GEAIGCFGLTEPDHGSDPASMATRARRDGDDWILNGSKLWITNAPIADVGVIWAR--TDD 182
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+ V D PG+T +I +K+ LR G+I L V +P + RLP + L
Sbjct: 183 GVRGFAVPMDTPGVTAREIRHKMSLRASLTGEIALDDVRLPADARLPEAIGLKAPLGCLT 242
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + + Y R QFG PLA FQ+ Q KL M +L+
Sbjct: 243 EARHGIVWGALGAARDCLETALEYATTRTQFGRPLAGFQLTQAKLADMAVEWNKGMLLAL 302
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L +L + G + P S+GK RE +A+ R+ +LG NG+ ++ V +
Sbjct: 303 HLGRLADAGTLRPDQVSVGK---LNNVREALAIARQCRTILGANGVSGEYPVMR 353
>gi|167563902|ref|ZP_02356818.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
EO147]
gi|167571037|ref|ZP_02363911.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
C6786]
Length = 395
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 186/345 (53%), Gaps = 3/345 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT +E+ VR + ++AP + + + + ++G L + G TI + YG PG
Sbjct: 18 LTDDERMVRDAANAYAQDKLAPRVTQAFRHETTDTAIFREMGELGLLGPTIPEQYGGPGL 77
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA I C+
Sbjct: 78 GYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 137
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYL 231
LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ ++I G++
Sbjct: 138 LTEPNHGSDPGSMVTRAKKVPGGYSLSGSKMWITNSPIADVFVVWAKLDEDGRDEIRGFI 197
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMV 291
++K GL+ I K+GLR G+I+L FVP+E+ +PGV + L +R +
Sbjct: 198 LEKGWKGLSAPTIHGKVGLRASITGEIVLDDAFVPEENIMPGVKGLRGPFTCLNSARYGI 257
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 351
AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 258 AWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMK 317
Query: 352 EKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 318 DEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|398943535|ref|ZP_10670836.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM41(2012)]
gi|398159129|gb|EJM47445.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM41(2012)]
Length = 393
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPDHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|324505490|gb|ADY42358.1| Glutaryl-CoA dehydrogenase [Ascaris suum]
Length = 418
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 192/354 (54%), Gaps = 5/354 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D F+ LL+ EE+++ + +E K + P + E + F ++P+LG + + G +
Sbjct: 33 DALDFNGLLSVEERSLMEQTQEYCRKSLMPRVIEAYRSERFDPTLLPELGKMGLLGAPYE 92
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G + G + E+ +D+ + + V +SL + I GSE QK+KY+P LA
Sbjct: 93 GYGCAGTTFVGYGLLAREVEAIDSGYRSTVSVQTSLVIGPIYNYGSEAQKKKYIPGLAAG 152
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG---WILEGQKRWIGNSTFADVLVIFAR-NT 222
I C+ LTEP +GS+ + + T A + +G + L G K WI NS ADV++++AR +
Sbjct: 153 ELIGCFGLTEPNHGSNPAGMETKA-RWDGNAKVYKLSGTKSWISNSPVADVMIVWARSDR 211
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
N+I G+++++ GLT KIE K+ LR G I + +V VP+E+ LP V
Sbjct: 212 HDNEIMGFILERGMSGLTTPKIEGKLSLRTSVTGQIAMDEVPVPEENLLPNVKGIVGPFG 271
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R+ +AW +G + +++ Y ER QFG PLA Q+ Q KL ML I +
Sbjct: 272 CLNNARLSIAWGALGAARTCFEIARDYALERPQFGRPLAKNQLIQVKLADMLTEISIGLH 331
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++ + +P SL K +A E R++LGGNGI+ ++ V +
Sbjct: 332 ACLRVTRLKDEKSCSPQQISLIKRNSCGKALEIARKARDILGGNGIVDEYHVMR 385
>gi|359393899|ref|ZP_09186952.1| hypothetical protein KUC_0540 [Halomonas boliviensis LC1]
gi|357971146|gb|EHJ93591.1| hypothetical protein KUC_0540 [Halomonas boliviensis LC1]
Length = 392
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 189/357 (52%), Gaps = 8/357 (2%)
Query: 48 YYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
++ +DD LT EE+ +R + ++ + P + + + F ++ ++G L +
Sbjct: 3 HFNWDDPLLLEQQLTDEERQIRDAAYDYCQENLQPRVLSAFREERFDREIMTEMGELGLL 62
Query: 102 GGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G T+ YG G + + E+ RVD+ + + V SSL M I GSEEQKQK+L
Sbjct: 63 GATVSPEYGGAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMYPIETYGSEEQKQKFL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA + C+ LTEP +GSD + T A KV+GG+ L G K WI NS AD+ V++A+
Sbjct: 123 PKLASGEMVGCFGLTEPDHGSDPGNMITRAEKVDGGYRLTGAKMWITNSPIADIAVVWAK 182
Query: 221 NTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+ NQI G++V++ G T KIE K+ LR G+I+L FVP+E+ LP ++ +
Sbjct: 183 SAAHDNQIKGFIVERGVDGFTTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNISGLKG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 243 PFGCLNKARYGIAWGVMGTAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEITL 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++ +L + G P SL K +A + R++ GGNG+ ++ V +
Sbjct: 303 GLQAALQVGRLMDSGNWAPEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIR 359
>gi|149186178|ref|ZP_01864492.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
SD-21]
gi|148830209|gb|EDL48646.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
SD-21]
Length = 391
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 185/352 (52%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D+ LT EE+ +R + E+ P + E + K + P +G + G T+
Sbjct: 8 DPFNLDEQLTEEERMIRDAAHGFAQGELQPRVIEGFSKELDAPELFPLMGEAGLLGATVP 67
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M I GSEEQKQKYLP LA
Sbjct: 68 EEYGGAGATYVAYGLIAREIERVDSGYRSMASVQSSLVMYPIHAYGSEEQKQKYLPGLAS 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-T 224
I C+ LTEP GSD + + TTA KV+GG++L G K WI NS FADV V++A++
Sbjct: 128 GQLIGCFGLTEPDAGSDPAGMKTTAKKVDGGYVLNGSKTWISNSPFADVFVVWAKSEEHG 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ KIE KI LR G I++ +V V ++ LP V + L
Sbjct: 188 GGIRGFVLEKGMKGLSAPKIEGKISLRASTTGMIVMDEVEVDEDALLPEVQGLKGPFGCL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G + +Y +R+QFG PLA+ Q+ Q KL M+ I +
Sbjct: 248 NRARYGISWGALGAAEFCMHAARQYGLDRQQFGVPLASKQLYQLKLADMMTEISLGLQGS 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G +P S+ K +A + R++ GGNGI ++ V +
Sbjct: 308 LRVGRLMDEGRFSPDMISIVKRNNVGKALDIARKARDMHGGNGISEEYQVIR 359
>gi|76810110|ref|YP_334609.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
gi|254259102|ref|ZP_04950156.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1710a]
gi|189339699|pdb|3D6B|A Chain A, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei
gi|189339700|pdb|3D6B|B Chain B, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei
gi|189339701|pdb|3D6B|C Chain C, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei
gi|189339702|pdb|3D6B|D Chain D, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei
gi|76579563|gb|ABA49038.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
gi|254217791|gb|EET07175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
1710a]
Length = 395
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 188/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D L +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|227832461|ref|YP_002834168.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
gi|262183674|ref|ZP_06043095.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
gi|227453477|gb|ACP32230.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
Length = 393
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 182/355 (51%), Gaps = 8/355 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LL+ EE+A R +V +++ I P + +++E A P + P L + G +
Sbjct: 2 TDLLGIDALLSEEEKATRNRVAALVDEHIRPYVGQWYEDAVLPESIFPVLAEAGLFGMHL 61
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G S +A+ E+ D+ T + V SLAM I GSEEQKQ++LP +A
Sbjct: 62 EGYGCAGRSAVEYGLAMQELEAGDSGIRTVVSVQGSLAMSAIYKHGSEEQKQQWLPQMAA 121
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD + + T A G W+L+G KRWIG ++ A V +I+A+ + +
Sbjct: 122 GEIIGCFGLTEPTAGSDPAGMATMARYRSGEWVLDGAKRWIGLASVAGVAIIWAKVSEED 181
Query: 226 Q--------INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ G++V PG T I K+ +R DI L+ V VP + LP
Sbjct: 182 AATAGVEAGVRGFIVPTSTPGFKATPITRKLSMRASIQCDIELEGVAVPGDALLPKHPGL 241
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +++ +G + ++ Y KERKQF LA+FQ+ QQKLV M +
Sbjct: 242 KGPFMCLNEARFGISFGALGAARDSLEVALEYAKERKQFDRSLASFQLTQQKLVDMAVEL 301
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
L+ L + + G + P S+GK A E R +LGGNGI +DF
Sbjct: 302 NKGQLLALNLGRAKDAGTLEPYQISVGKLANCRTAIEICRQARTILGGNGITADF 356
>gi|209870540|pdb|3EOM|A Chain A, 2.4 A Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei
gi|209870541|pdb|3EOM|B Chain B, 2.4 A Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei
gi|209870542|pdb|3EOM|C Chain C, 2.4 A Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei
gi|209870543|pdb|3EOM|D Chain D, 2.4 A Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei
gi|209870544|pdb|3EON|A Chain A, 2.55a Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei In Complex
With A Small Molecule
gi|209870545|pdb|3EON|B Chain B, 2.55a Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei In Complex
With A Small Molecule
gi|209870546|pdb|3EON|C Chain C, 2.55a Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei In Complex
With A Small Molecule
gi|209870547|pdb|3EON|D Chain D, 2.55a Crystal Structure Of Native Glutaryl-Coa
Dehydrogenase From Burkholderia Pseudomallei In Complex
With A Small Molecule
gi|281307101|pdb|3II9|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei At 1.73 Angstrom
gi|281307102|pdb|3II9|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei At 1.73 Angstrom
gi|281307103|pdb|3II9|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei At 1.73 Angstrom
gi|281307104|pdb|3II9|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei At 1.73 Angstrom
Length = 396
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 188/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D L +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 10 DDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 70 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 189
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 190 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 249
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 309
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 310 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|399003317|ref|ZP_10705983.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM18]
gi|398123160|gb|EJM12731.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM18]
Length = 393
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPDHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|52842786|ref|YP_096585.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295416|ref|YP_127831.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
gi|54298568|ref|YP_124937.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
gi|378778475|ref|YP_005186914.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629897|gb|AAU28638.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53752353|emb|CAH13785.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
gi|53755248|emb|CAH16742.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
gi|364509291|gb|AEW52815.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 385
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 191/355 (53%), Gaps = 4/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D+ L +E+ +R V + ++ P+MAE +E A FP +I K L + G T+
Sbjct: 3 DLLFLDEQLHDDERMIRDSVSRFVSNDVIPLMAESYEHAHFPKELIKKSADLGLLGLTLP 62
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG S + E+ R D+ +F+ V SSL M I GSEEQK++YLP +A
Sbjct: 63 AEYGGAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPIFKFGSEEQKKRYLPEMAA 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
N I C+ LTEP GSD +++ T A K+EGGWIL G K WI N+ AD+ +++A+ T
Sbjct: 123 GNIIGCFGLTEPDSGSDPASMRTHAKKIEGGWILNGAKMWITNAPIADIAIVWAK--TEA 180
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP-GVNSFQDTSKVL 284
I G++V + G++ +I+ K+ LR G+++ VFVPDE+ LP L
Sbjct: 181 GIRGFIVDTKSEGMSCPEIKLKMSLRASITGELVFDNVFVPDENLLPKSEKGLGAALSCL 240
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+ +R +AW +G +M +D+ YL ERKQF PLA+FQ+ Q+ L M I +
Sbjct: 241 SQARYGIAWGAMGAAMACFDIARDYLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLN 300
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
++ +L ++ TP SL K A + R L+GGNGI ++ V + ++
Sbjct: 301 LQIGRLKDQHRETPTMISLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHML 355
>gi|302550412|ref|ZP_07302754.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
gi|302468030|gb|EFL31123.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
Length = 394
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 184/362 (50%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCAS-DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPK 94
+SK PP D DDLL E+ +R VR + P +AE++EK E P + +
Sbjct: 2 SSKLPPFDPVDPLGLDDLLEPEDLGIRDTVRAWAADRVLPYVAEWYEKGELPGIRELAKE 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
LG + G ++ GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 62 LGGIGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEE 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP +A + I C+ LTEP +GSD +++ T A + W+L G+K WI N + A V
Sbjct: 122 QKQQWLPRMAAGDVIGCFGLTEPDHGSDPASMRTHAKRDGTDWVLNGRKMWITNGSVAGV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A+ T + I G++V D+ G + +I++K LR +++L V +P LP
Sbjct: 182 AVVWAQ--TEDGIRGFVVPTDSAGFSAPEIKHKWSLRASVTSELVLDDVRLPAAAVLPEG 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M
Sbjct: 240 TGLRGPLSCLSHARYGIVWGAMGAARSSFEAAVDYAKSREQFGRPIGGFQLTQAKLADMA 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ IL+ L + + G + P S GK A E R +LG NGI ++ V
Sbjct: 300 VELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPV 359
Query: 395 AK 396
+
Sbjct: 360 MR 361
>gi|116255587|ref|YP_771420.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
3841]
gi|115260235|emb|CAK03339.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
3841]
Length = 395
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LTSEE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ +VD+ + + V SSL M+ I GS+ QK KYLP LA
Sbjct: 71 SPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIETFGSQAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|228312334|pdb|3GQT|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment
(1,4-Dimethyl-1,2,3,4-
Tetrahydroquinoxalin-6-Yl)methylamine
gi|228312335|pdb|3GQT|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment
(1,4-Dimethyl-1,2,3,4-
Tetrahydroquinoxalin-6-Yl)methylamine
gi|228312336|pdb|3GQT|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment
(1,4-Dimethyl-1,2,3,4-
Tetrahydroquinoxalin-6-Yl)methylamine
gi|228312337|pdb|3GQT|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment
(1,4-Dimethyl-1,2,3,4-
Tetrahydroquinoxalin-6-Yl)methylamine
gi|251836940|pdb|3GNC|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment 6421
gi|251836941|pdb|3GNC|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment 6421
gi|251836942|pdb|3GNC|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment 6421
gi|251836943|pdb|3GNC|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
Burkholderia Pseudomallei With Fragment 6421
Length = 399
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 188/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D L +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 13 DDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 72
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 73 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 133 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 192
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 193 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 252
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 253 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 312
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 313 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 366
>gi|167031196|ref|YP_001666427.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida GB-1]
gi|166857684|gb|ABY96091.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
Length = 393
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEIGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDEGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVPDE+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPDENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|403053639|ref|ZP_10908123.1| glutaryl-CoA dehydrogenase [Acinetobacter bereziniae LMG 1003]
Length = 407
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 188/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT EE+ +R + ++ + E + + + ++G L + G TI
Sbjct: 19 DPFLLEQQLTEEERMIRDAAYAYSQDKLMSRVLEQFRHEQTDISIFREMGELGLLGPTIP 78
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI RVD+ + V SSL M+ I GSE+QKQKYLP LA
Sbjct: 79 EQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGSEQQKQKYLPKLAS 138
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS AD+ V++A+ +
Sbjct: 139 GEFIGCFGLTEPDHGSDPGSMITRAKKVAGGYRLTGAKMWITNSPIADIFVVWAKEVSAE 198
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 199 GHVGEIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLRGPF 258
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 259 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLVQKKLADMQTEIALGL 318
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 319 QIALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARVARDMMGGNGISDEFGVAR 373
>gi|167847060|ref|ZP_02472568.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
B7210]
gi|254194820|ref|ZP_04901250.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
gi|386860680|ref|YP_006273629.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1026b]
gi|403519889|ref|YP_006654023.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei BPC006]
gi|418533148|ref|ZP_13099016.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1026a]
gi|418539926|ref|ZP_13105498.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1258a]
gi|418546176|ref|ZP_13111405.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1258b]
gi|169651569|gb|EDS84262.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
gi|385361656|gb|EIF67536.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1026a]
gi|385363430|gb|EIF69207.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1258a]
gi|385365375|gb|EIF71058.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1258b]
gi|385657808|gb|AFI65231.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1026b]
gi|403075532|gb|AFR17112.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
BPC006]
Length = 395
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT +E+ VR + ++AP + E + + ++G + + G TI
Sbjct: 9 DDPLLLDQQLTDDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA
Sbjct: 69 PEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NT 222
I C+ LTEP +GSD ++ T A KV GG+ L G K WI N+ ADV V++A+
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRARKVLGGYSLSGSKMWITNAPIADVFVVWAKLDED 188
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
++I G++++K GL+ I K+GLR G+I+L + FVP+E+ LP V +
Sbjct: 189 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R +AW +G + + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 GVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|333916083|ref|YP_004489815.1| glutaryl-CoA dehydrogenase [Delftia sp. Cs1-4]
gi|333746283|gb|AEF91460.1| Glutaryl-CoA dehydrogenase [Delftia sp. Cs1-4]
Length = 398
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 190/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D +Q D L+ +E+ +R ++++AP + E + + + ++G L + G TI
Sbjct: 9 DDPFQLDQQLSEDERMIRDAAHAYCQEKLAPRVLEMFRHEKSDVSIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + + EI RVD+ + V SSL M+ I G+E+QK +YLP LA
Sbjct: 69 PTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEDQKNRYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++++ A KV+GG+ L+G K WI NS ADV V++A+ T
Sbjct: 129 SGEFIGCFGLTEPDHGSDPGSMSSRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVTE 188
Query: 225 N----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
+ +I G+++ K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 189 DGHVGEIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVFVPEENAFPEVRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ ++ ++ SL K ++ + + R+++GGNGI +F VA+
Sbjct: 309 LQAALRVGRMKDEHQNVIEITSLIKRNNCGKSLDIARMARDMMGGNGISDEFGVAR 364
>gi|83648760|ref|YP_437195.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
gi|83636803|gb|ABC32770.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
Length = 395
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 11/358 (3%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + + LT +E+ +R R ++++ + E K F ++ +LG L + G T+
Sbjct: 11 SDPFLLETQLTDDERMIRDTARNYAQEKLMSRILEANRKEIFHREIMNELGELGLLGSTL 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YGC G + + E+ RVD+ + + V SSL M I GSEEQ++KYLP LA
Sbjct: 71 PEEYGCAGANYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRKKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP GSD ++ T A +V G++L+G K WI NS ADV+V++A+
Sbjct: 131 SGEWVGCFGLTEPDSGSDPGSMRTRAERVADGYLLKGTKMWITNSPIADVMVVWAK--LD 188
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G++++K GLT KIE K LR G+I++ VFVP+ + LP + + L
Sbjct: 189 GEIRGFILEKGMKGLTAPKIEGKFSLRASITGEIVMDDVFVPEANMLPNASGLKGPFGCL 248
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y +RKQFG PLAA Q+ Q KL N+Q I +G
Sbjct: 249 NKARYGIAWGALGAAEFCWTQARQYCLDRKQFGRPLAANQLVQLKLA----NMQTEISIG 304
Query: 345 WRLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ C +L ++G P SL K +A + + R++ GGNGI +F V + +
Sbjct: 305 LQGCLQAGRLMDEGRCAPELISLIKRNSCGKALDIARIARDMHGGNGIADEFHVIRHV 362
>gi|339485066|ref|YP_004699594.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida S16]
gi|338835909|gb|AEJ10714.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida S16]
Length = 393
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPRLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ T + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDTGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|397668251|ref|YP_006509788.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor (GCD)
[Legionella pneumophila subsp. pneumophila]
gi|395131662|emb|CCD09955.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor (GCD)
[Legionella pneumophila subsp. pneumophila]
Length = 381
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 4/351 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D+ L +E+ +R V + ++ P+MAE +E A FP +I K L + G T+ YG
Sbjct: 3 LDEQLHDDERMIRDSVSRFVSNDVIPLMAESYEHAHFPKELIKKSADLGLLGLTLPAEYG 62
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
S + E+ R D+ +F+ V SSL M I GSEEQK++YLP +A N I
Sbjct: 63 GAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPIFKFGSEEQKKRYLPEMAAGNII 122
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP GSD +++ T A K+EGGWIL G K WI N+ AD+ +++A+ T I G
Sbjct: 123 GCFGLTEPDSGSDPASMRTHAKKIEGGWILNGAKMWITNAPIADIAIVWAK--TEAGIRG 180
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP-GVNSFQDTSKVLAVSR 288
++V + G++ +I+ K+ LR G+++ VFVPDE+ LP L+ +R
Sbjct: 181 FIVDTKSEGMSCPEIKLKMSLRASITGELVFDNVFVPDENLLPKSEKGLGAALSCLSQAR 240
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G +M +D+ YL ERKQF PLA+FQ+ Q+ L M I + ++
Sbjct: 241 YGIAWGAMGAAMACFDIARDYLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIG 300
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ TP SL K A + R L+GGNGI ++ V + ++
Sbjct: 301 RLKDQHRETPTMISLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHML 351
>gi|409422235|ref|ZP_11259340.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. HYS]
Length = 393
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|375137185|ref|YP_004997835.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
gi|417546415|ref|ZP_12197501.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC032]
gi|421666121|ref|ZP_16106214.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC087]
gi|325124630|gb|ADY84153.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
gi|400384303|gb|EJP42981.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC032]
gi|410388528|gb|EKP40964.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC087]
Length = 406
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|432341056|ref|ZP_19590443.1| acyl-CoA dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430773924|gb|ELB89565.1| acyl-CoA dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 396
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 182/354 (51%), Gaps = 4/354 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAG 102
A D D L + +E AVR VR+ + I P +A+++E + P + + G L V G
Sbjct: 12 ALDPLGIDSLYSGDEIAVRETVRKFCAEHITPHVADWFEAGDLPGVRDLAKEFGKLGVLG 71
Query: 103 GTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPS 162
+ GYGC G S +A E+ D+ + + V SLAM +I GSEEQKQ++LP
Sbjct: 72 MHLDGYGCSGSSAVHYGLACLELEAADSGIRSLVSVQGSLAMFSIWNNGSEEQKQRWLPG 131
Query: 163 LAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+A I C+ LTEP GSD +A+ T A + W+L+G+K WI N + ADV V++A
Sbjct: 132 MAAGEIIGCFGLTEPDVGSDPAAMKTRARRDGSDWVLDGRKMWITNGSIADVAVVWA--N 189
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
T + G++V D PG + I++K+ LR G+++L V +P + LP + +
Sbjct: 190 TDEGVRGFIVPTDTPGFSAPLIKHKLSLRASVTGELVLDGVRLPADALLPDATGVKAPLQ 249
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L+ +R + W +G + ++ Y +R QFG P+ FQ+ Q KL M + L
Sbjct: 250 SLSEARYGIIWGAMGAARSAWEAARTYSMQRTQFGRPIGGFQLTQAKLTDMAVELHKGQL 309
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ L ++ + + P S GK T A E R +LGGNGI ++ V +
Sbjct: 310 LSLHLGRIKDTVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPVIR 363
>gi|421748538|ref|ZP_16186124.1| glutaryl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
gi|409772735|gb|EKN54674.1| glutaryl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
Length = 397
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT++E+ VR + ++ P + E + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTADERMVRDAAAAYCQDKLMPRVLESFRHEKTDATIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I GSE QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVDGGYELSGAKMWITNSPIADVFVVWAKLMGE 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ +VFVP+E+ +PGV+ +
Sbjct: 190 DGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVMDQVFVPEENLMPGVSGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|218515203|ref|ZP_03512043.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
Length = 395
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 188/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LT+EE+ V+ ++++AP + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTNEERMVQDTAHAYAQQKLAPRVLDAFRNERTDPAIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ RVD+ + + V SSL M+ I GSE QK KYLP LA
Sbjct: 71 SPDYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDTFGSEAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 131 AGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LPGV + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPGVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG LAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRSLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|222153899|ref|YP_002563076.1| acyl-CoA dehydrogenase [Streptococcus uberis 0140J]
gi|222114712|emb|CAR43828.1| putative acyl-CoA dehydrogenase [Streptococcus uberis 0140J]
Length = 405
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 183/356 (51%), Gaps = 3/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT- 104
SD Y + D LT E+AV ++ E +EK++ P++AE W A FP K+ LR+
Sbjct: 19 SDLYNYADALTDGEKAVLKELEEVLEKDLKPLLAENWHNATFPLEAFQKVIDLRLMDDPR 78
Query: 105 -IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
++G S +A+ D TF + L + + GSEEQ + +P +
Sbjct: 79 LLEGRENGRISELFRGFRAYTLAKTDPVLGTFYTANGGLFHECVRVGGSEEQVAQLMPGV 138
Query: 164 AQLNTIACWALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222
+ A+TEP +GSD A + TA + WIL G K+WIG A FAR+
Sbjct: 139 YSWEGLGVLAMTEPDHGSDIAGGMAATAKREGDHWILNGHKKWIGAGAIAKWHAFFARDV 198
Query: 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
NQ+ + V+++ G+ K R++ N +I+ + V VP+ R VNS++D +
Sbjct: 199 DDNQVKLFYVERETEGVETFVTPQKAFFRMMPNAEIIYRDVKVPESQRAQNVNSWKDCAN 258
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+L +R VAW G + G ++ +Y +ER+QFG P+A FQ+ Q+KL +M N QA +
Sbjct: 259 ILRNTRSDVAWLLAGATAGAFEAALKYTREREQFGKPIANFQLIQEKLARMAMNAQATLA 318
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
+ RL + E+G +S+ K RARET AL RE+ GGNGIL + + +
Sbjct: 319 IAVRLAEQQEQGIYREEASSMAKLHNGFRARETAALAREVGGGNGILLKYDIPRFF 374
>gi|388501474|gb|AFK38803.1| unknown [Lotus japonicus]
Length = 148
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/109 (84%), Positives = 100/109 (91%)
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
MV WQPIG+SMG+YDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN+QAM+LVGWRLCK
Sbjct: 1 MVCWQPIGVSMGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCK 60
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
LYE G +TPGHASLGKSWI+ RARET ALGRE LGGNGIL+D+ VAK
Sbjct: 61 LYESGKLTPGHASLGKSWISLRARETAALGRESLGGNGILADYRVAKAF 109
>gi|359430750|ref|ZP_09221740.1| putative glutaryl-CoA dehydrogenase [Acinetobacter sp. NBRC 100985]
gi|358233809|dbj|GAB03279.1| putative glutaryl-CoA dehydrogenase [Acinetobacter sp. NBRC 100985]
Length = 396
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 190/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + + L EE+ +R + ++ P + + + + ++ ++G L + G TI
Sbjct: 9 NDPFLIEQQLNEEERMIRDTAHAFCQDKLMPRVLDQFRHEKTDLNIFREMGELGLLGPTI 68
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + EI RVD+ + V SSL M+ I G+E+QKQKYLP LA
Sbjct: 69 PEQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFGTEQQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 129 TGEWIGCFGLTEPDHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKEVSA 188
Query: 225 N----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
I G++++K GL+ I K+GLR G+I++ +VFVP+E+ P V +
Sbjct: 189 EGNVGPIRGFILEKSWQGLSAPAIHGKVGLRASITGEIVMDQVFVPEENAFPEVRGLKGP 248
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 249 FTCLNSARYGIAWGAMGAAEFCWHTARQYTLDRKQFGKPLAANQLIQKKLADMQTEIALG 308
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + R ++ ++G + SL K +A + L R++LGGNGI +F +A+
Sbjct: 309 LQIALRFGRMKDEGIASLEATSLIKRNNCGKALDIARLARDMLGGNGISDEFGIAR 364
>gi|374704612|ref|ZP_09711482.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. S9]
Length = 392
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ ++AP + E + + + ++G + G TI + YG
Sbjct: 14 LDQQLTEEERMVRDSAQQFANDKLAPRVLEAFRNEQTDPAIFREMGETGLLGATIPEAYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+EE +QKYLP LA I
Sbjct: 74 GSGLTYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPIYEFGNEETRQKYLPKLASGEYI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A VEGG+ L G K WI NS ADV V++A++ +I G
Sbjct: 134 GCFGLTEPNHGSDPGSMITRARAVEGGYRLSGSKNWITNSPIADVFVVWAKDDA-GEIRG 192
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+ + PGV + L +R
Sbjct: 193 FVLEKGWEGLSTPAIHGKVGLRASITGEIVMDNVFVPEVNAFPGVRGLKGPFTCLNSARY 252
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 253 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLVQKKLADMQTEITLALQGCLRLGR 312
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ E + R++LGGNGI +F VA+
Sbjct: 313 MKDEGTAAVEITSIMKRNSCGKSLEIARMARDMLGGNGISDEFGVAR 359
>gi|148553745|ref|YP_001261327.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
wittichii RW1]
gi|148498935|gb|ABQ67189.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
Length = 394
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D +Q DD LT +E+ +R ++ + P + + + + ++GA + G T+
Sbjct: 10 ADPFQLDDQLTDDERMIRDAAHAYAQERLQPRVIKAYADEHTDPDIFREMGAQGLLGVTV 69
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+G G S + E+ RVD+ + + V SSL M I GSEEQK++YLP LA
Sbjct: 70 PDEFGGAGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGSEEQKRRYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD + T A K EGG+ L G K WI N+ ADV V++A++
Sbjct: 130 SGEWIGCFGLTEPDAGSDPGGMRTRAVKTEGGYRLSGNKTWISNAPIADVFVVWAKSDAH 189
Query: 225 N-QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ QI G++++K A GL+ KIE K+ LR G I L V V ++ LP V +
Sbjct: 190 DGQIRGFVLEKGAKGLSAPKIEGKLSLRASITGMINLDDVEVGEDALLPNVQGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL ML +I +
Sbjct: 250 LNRARYGISWGALGAAEFCFHAARQYGLDRKQFGRPLAATQLYQKKLADMLTDISLGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++G P S+ K +A + R++ GGNGI ++ V + +M
Sbjct: 310 SLRVGRLMDEGRFAPEMVSIVKRNNVGKALDIARQARDMHGGNGISEEYQVIRHMM 365
>gi|392591053|gb|EIW80381.1| acyl-CoA dehydrogenase domain-containing protein [Coniophora
puteana RWD-64-598 SS2]
Length = 406
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 182/352 (51%), Gaps = 4/352 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D D LL+ EE A+R + E + P + + W +F ++P++G L + G T
Sbjct: 19 GQDPLNLDSLLSEEEIAIRYGLCE----NLMPRVLDGWRTEQFNHDILPEMGKLGLLGPT 74
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
IKGYGC G + + EI RVD+ + V SSL M I GSE QK+KYLP LA
Sbjct: 75 IKGYGCAGVNNVAYGLIAREIERVDSGYRSTASVQSSLVMHPINEFGSEAQKEKYLPRLA 134
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I C+ LTEP +GSD + + TTA + EGG++L G K WI N+ AD+ V++AR
Sbjct: 135 KGEIIGCFGLTEPNHGSDPAGMETTAEETEGGFVLNGAKTWISNAPVADIFVVWARCKWD 194
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
N++ G++++K GL I+NK+ LR G I + V + + LP + L
Sbjct: 195 NKVRGFILEKGMKGLEAPAIKNKVALRASVTGSIFMDTVKLTHDAVLPNGSGLGAAFSCL 254
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W +G Y ERKQF PLA+FQ+ Q+KLV + +
Sbjct: 255 NSARYGISWGTMGALEDCIARTRDYGLERKQFNRPLASFQLVQKKLVDAQTEVALGLQAS 314
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ +L ++G + P S+ K +A + + ++LGGN ++ V +
Sbjct: 315 LQVGRLKDQGKLAPEMVSMVKRNNCGKALQHARIVLDILGGNASADEYHVGR 366
>gi|257094593|ref|YP_003168234.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047117|gb|ACV36305.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 389
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 191/354 (53%), Gaps = 2/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ L+ +E+ VR R + ++AP + + + + ++G + + G TI
Sbjct: 8 DPLLLEEQLSEDERLVRDAARNYCQGKLAPRVQMAFRQETSDPAIFREMGEIGLLGPTIP 67
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
YG G + + EI RVD+ + + V SSL ML I + GSE QK+++LP LA+
Sbjct: 68 TEYGGAGLNYVSYGLIAREIERVDSGYRSMMSVQSSLVMLPIFVFGSEAQKRRFLPGLAR 127
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ A +GG+ L G K WI NS AD+ V++A+N
Sbjct: 128 GELIGCFGLTEPNHGSDPGSMLARAHPADGGYRLSGTKTWISNSPIADLFVVWAKNDA-G 186
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G+L++K PGL+ I K+GLR G+I++ VFVP ++ LPG + + L
Sbjct: 187 RIRGFLLEKGMPGLSTPIIHGKMGLRASITGEIVMDDVFVPADNELPGASGLKGPFACLD 246
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + RY+ +R+QFG PLAA Q+ Q+KL M I +
Sbjct: 247 AARYGIAWGALGAAEDCWLRARRYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGCL 306
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL +L ++G P SL K +A E L R++ GGNGI ++ V + ++
Sbjct: 307 RLGRLKDEGKAAPEITSLMKRNSCGKALEIARLARDMHGGNGIADEYGVIRHLL 360
>gi|347820018|ref|ZP_08873452.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 398
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 188/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + L+ +E+ +R + ++AP + + + + + ++GA+ + G TI
Sbjct: 10 DPFLLGQQLSDDERMLRDAAAAYCQDKLAPRVLDAFRHEKMDPGIFREMGAIGLLGPTIS 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG PG + + EI RVD+ + V SSL ML I G+E Q+QKYLP LA+
Sbjct: 70 ERYGGPGLNHVAYGLIAREIERVDSGYRSMASVQSSLVMLPIHEFGTEAQRQKYLPGLAR 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT- 224
I C+ LTEP +GSD ++ T A KV GG+ +EG K WI NS ADV V++A+ +
Sbjct: 130 GEWIGCFGLTEPDHGSDPGSMATRAHKVAGGYRIEGSKMWITNSPVADVFVVWAKEVSAG 189
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I KIGLR G+I++ VFVP+E+ P V +
Sbjct: 190 GALGPIRGFVLEKGMRGLSAPAIHGKIGLRTSVTGEIVMNAVFVPEENAFPEVQGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLDSARYGIAWGALGAAEFCWHRARQYTLERKQFGRPLAANQLVQKKLADMQTEIAIGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G SL K +A + R++LGGNGI +F VA+
Sbjct: 310 QACLRLGRMKDEGTAAVEATSLIKRNSCGKALDIARQARDMLGGNGISDEFGVAR 364
>gi|120556229|ref|YP_960580.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
aquaeolei VT8]
gi|120326078|gb|ABM20393.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
Length = 393
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR R+ E ++ P + + + + + +G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSARQFAESKLRPRVLDAFRNEQTDPEIFRGMGETGLLGCTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+EE +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGNEETRQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A++ I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVEGGYRLTGSKMWITNSPIADVFVVWAKDDD-GAIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDGVFVPEENAFPNVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEDCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEISLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDVARLARDMLGGNGISDEFGVAR 360
>gi|429210555|ref|ZP_19201722.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. M1]
gi|428159329|gb|EKX05875.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. M1]
Length = 393
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQDKLAPRVLEAFRHEQTDPAIFREMGETGLLGATIPAEYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E KQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGNEATKQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|307611459|emb|CBX01128.1| hypothetical protein LPW_28271 [Legionella pneumophila 130b]
Length = 382
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 4/351 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D+ L +E+ +R V + ++ P+MAE +E A FP +I K L + G T+ YG
Sbjct: 4 LDEQLHDDERMIRDSVSRFVSNDVIPLMAESYEHAHFPKELIKKSADLGLLGLTLPAEYG 63
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
S + E+ R D+ +F+ V SSL M I GSEEQK++YLP +A N I
Sbjct: 64 GAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPIFKFGSEEQKKRYLPEMAAGNII 123
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP GSD +++ T A K+EGGWIL G K WI N+ AD+ +++A+ T I G
Sbjct: 124 GCFGLTEPDSGSDPASMRTHAKKIEGGWILNGAKMWITNAPIADIAIVWAK--TEAGIRG 181
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP-GVNSFQDTSKVLAVSR 288
++V + G++ +I+ K+ LR G+++ VFVPDE+ LP L+ +R
Sbjct: 182 FIVDTKSEGMSCPEIKLKMSLRASITGELVFDNVFVPDENLLPKSEKGLGAALSCLSQAR 241
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G +M +D+ YL ERKQF PLA+FQ+ Q+ L M I + ++
Sbjct: 242 YGIAWGAMGAAMACFDIARDYLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIG 301
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ TP SL K A + R L+GGNGI ++ V + ++
Sbjct: 302 RLKDQHRETPTMISLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHML 352
>gi|15595644|ref|NP_249138.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|107099431|ref|ZP_01363349.1| hypothetical protein PaerPA_01000443 [Pseudomonas aeruginosa PACS2]
gi|116054176|ref|YP_788620.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889187|ref|YP_002438051.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|254237322|ref|ZP_04930645.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
gi|254243543|ref|ZP_04936865.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
gi|296386944|ref|ZP_06876443.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
gi|313111928|ref|ZP_07797717.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
gi|355646776|ref|ZP_09054611.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. 2_1_26]
gi|386056514|ref|YP_005973036.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa M18]
gi|386068643|ref|YP_005983947.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|392981857|ref|YP_006480444.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa DK2]
gi|416856294|ref|ZP_11911938.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 138244]
gi|416874969|ref|ZP_11918462.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 152504]
gi|418584985|ref|ZP_13149042.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa MPAO1/P1]
gi|418591709|ref|ZP_13155600.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa MPAO1/P2]
gi|419755927|ref|ZP_14282279.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PADK2_CF510]
gi|421157470|ref|ZP_15616838.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
gi|421165313|ref|ZP_15623649.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 700888]
gi|421172211|ref|ZP_15629987.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa CI27]
gi|421178357|ref|ZP_15635971.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa E2]
gi|421515063|ref|ZP_15961749.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO579]
gi|424943134|ref|ZP_18358897.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa NCMG1179]
gi|451988168|ref|ZP_21936307.1| Glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 18A]
gi|452879193|ref|ZP_21956325.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa VRFPA01]
gi|9946306|gb|AAG03836.1|AE004482_3 glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|115589397|gb|ABJ15412.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169253|gb|EAZ54764.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
gi|126196921|gb|EAZ60984.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
gi|218769410|emb|CAW25170.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|310884219|gb|EFQ42813.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
gi|334842169|gb|EGM20782.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 138244]
gi|334842522|gb|EGM21128.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 152504]
gi|346059580|dbj|GAA19463.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa NCMG1179]
gi|347302820|gb|AEO72934.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa M18]
gi|348037202|dbj|BAK92562.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|354828315|gb|EHF12438.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. 2_1_26]
gi|375045317|gb|EHS37903.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049435|gb|EHS41931.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa MPAO1/P2]
gi|384397589|gb|EIE44000.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317362|gb|AFM62742.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa DK2]
gi|404348791|gb|EJZ75128.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO579]
gi|404538072|gb|EKA47629.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa CI27]
gi|404542286|gb|EKA51612.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 700888]
gi|404548411|gb|EKA57362.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa E2]
gi|404550574|gb|EKA59312.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
gi|451754144|emb|CCQ88830.1| Glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 18A]
gi|452184217|gb|EME11235.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa VRFPA01]
gi|453045825|gb|EME93543.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA21_ST175]
Length = 393
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQDKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 360
>gi|377571131|ref|ZP_09800254.1| glutaryl-CoA dehydrogenase [Gordonia terrae NBRC 100016]
gi|377531559|dbj|GAB45419.1| glutaryl-CoA dehydrogenase [Gordonia terrae NBRC 100016]
Length = 395
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 186/362 (51%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + D LL ++E A+R VR+ ++ P +AE++E+A P I + LG L
Sbjct: 4 PSTLPQLFALDSLLDADEIAIRDSVRDFAASKLRPHIAEWFEEARLPARDIARELGGLGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLEGYGCPGMSAMSYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ S + T A + W+L G K WI N + ADV V++A+
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPSGMRTHAKRDGDDWVLNGTKMWITNGSIADVAVVWAQ 183
Query: 221 NTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++V D PG + +I K+ LR +++ +V +P LP
Sbjct: 184 TDLADSPGGIRGFVVPTDTPGFSAPEITKKMSLRASVTSELVFDEVRLPASAMLPKAEGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + + +G + + Y + R+ F PLA +QI Q K+ M +
Sbjct: 244 RGPLTALGEARFGIIFGAMGAARDCLESAIDYAQSREVFDKPLAGYQITQTKIADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G +TP S GK T RE +A+ RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGELTPEQVSTGKLNST---REAIAIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|374261814|ref|ZP_09620392.1| hypothetical protein LDG_6786 [Legionella drancourtii LLAP12]
gi|363537908|gb|EHL31324.1| hypothetical protein LDG_6786 [Legionella drancourtii LLAP12]
Length = 385
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 188/356 (52%), Gaps = 4/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D+ L +E+ +R V + ++ P+MAE +E A+FP +I K L + G T+
Sbjct: 2 DDLLFLDEQLQDDERMIRDSVARFVRNDVIPLMAESFEHAQFPRELIRKSAELGLLGLTL 61
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG S + E+ + D+ +F+ V SSL M I GSEEQ+ +YLP +A
Sbjct: 62 PAEYGGAEASYVAYGLVCQELEKGDSGLRSFVSVQSSLCMYPIFRYGSEEQRVRYLPGMA 121
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD +++ T A KV+GGW L G K WI N+ AD+ +++A+ T
Sbjct: 122 TGEIIGCFGLTEPDAGSDPASMRTNAKKVDGGWRLNGAKMWITNAPIADIAIVWAK--TD 179
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS-KV 283
I G++V + G+ +I+ K+ LR G+++ VFV DE+ LPG +
Sbjct: 180 AGIRGFIVDTKSEGVRCPEIKLKMSLRASITGELVFDNVFVRDENLLPGSEKGLGAALSC 239
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L+ +R +AW IG ++ +D+ YL ERKQF PLA+FQI Q+ L M I +
Sbjct: 240 LSQARYGIAWGAIGAAIECFDITSNYLLERKQFDKPLASFQIIQKDLADMYTEIIKAQCL 299
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L ++ TP SL K A + R LLGGNGI ++ V + ++
Sbjct: 300 NLHVGRLKDEKRETPTMISLVKGNSCREALKIARKCRNLLGGNGISLEYHVIRHML 355
>gi|383650172|ref|ZP_09960578.1| glutaryl-CoA dehydrogenase [Streptomyces chartreusis NRRL 12338]
Length = 396
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 187/364 (51%), Gaps = 5/364 (1%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
+ +SK PP +D D+LL E+ +R VR + P +AE++EK E P +
Sbjct: 2 SESSKLPPFDPADPLGLDELLEPEDLGIRDTVRAWAADRVLPHVAEWYEKGELPEIRELA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LG L G ++KGYGC G S +A E+ D+ + + V SLAM I GS
Sbjct: 62 RELGELGALGMSLKGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
E QKQ++LP +A I C+ LTEP +GSD +++ T A + W+L G+K WI N + A
Sbjct: 122 EAQKQQWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKRDGTDWVLNGRKMWITNGSVA 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V V++A+ T + I G++V D+ G + +I++K LR +++L +V +P + LP
Sbjct: 182 GVAVVWAQ--TEDGIRGFVVPTDSAGFSAPEIKHKWSLRASVTSELVLDEVRLPADAVLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL
Sbjct: 240 EGTGLRGPLSCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A E R +LG NGI ++
Sbjct: 300 MAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVMR 363
>gi|351711555|gb|EHB14474.1| Glutaryl-CoA dehydrogenase, mitochondrial [Heterocephalus glaber]
Length = 439
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 190/377 (50%), Gaps = 3/377 (0%)
Query: 25 ALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
L + V P+A AS+ D ++ L ++E +R R + + P + +
Sbjct: 31 GLVVGVVKPRAPLASRPKFDWWDPLVLEEQLKADEILIRDTFRNYCHERLMPRILMAYRN 90
Query: 85 AEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAM 144
F ++ ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M
Sbjct: 91 GVFNREIVTEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSMMSVQSSLVM 150
Query: 145 LTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQ 202
I GSEEQ+QKYLP LA+ + C+ LTEP +GSD S + T A + L G
Sbjct: 151 HPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNHGSDPSRMETRARHNPASKSYTLSGT 210
Query: 203 KRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKK 262
K WI NS AD+ V++AR +I G+L++K GL+ KIE K LR G I++
Sbjct: 211 KTWITNSPVADLFVVWAR-CEDARIRGFLLEKGMRGLSAPKIEGKFSLRASTTGMIIMDS 269
Query: 263 VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAA 322
V VP+++ LP V L +R + W +G + +Y +R QFGAPLA
Sbjct: 270 VEVPEDNVLPNVAGLAGVFNCLNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGAPLAK 329
Query: 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 382
Q+ Q+KL ML I + RL +L ++ TP SL K +A + R++
Sbjct: 330 NQLIQKKLADMLTEITLGLQACLRLGRLKDQDRATPEMVSLLKRNNCGKALDIARQARDM 389
Query: 383 LGGNGILSDFLVAKVIM 399
LGGNGIL ++ V + M
Sbjct: 390 LGGNGILDEYHVIRHAM 406
>gi|424775805|ref|ZP_18202795.1| glutaryl-CoA dehydrogenase [Alcaligenes sp. HPC1271]
gi|422888905|gb|EKU31287.1| glutaryl-CoA dehydrogenase [Alcaligenes sp. HPC1271]
Length = 383
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 192/362 (53%), Gaps = 10/362 (2%)
Query: 45 ASDYYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
A+ + +DD L+ EE+ VR ++++ P + E + + + ++G+L
Sbjct: 3 ANPSFHWDDPLLLNQQLSDEERMVRDAAHAYAQEKLLPRVLEAFRHEQTDPAIFAEMGSL 62
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G TI + YG G + + E+ RVD+ + + V SSL M+ I GSEEQKQ
Sbjct: 63 GLLGATIPEAYGGAGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSEEQKQ 122
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
KYLP LA I C+ LTEP +GSD A+ + A KV+GG+ L G K WI NS ADVLV+
Sbjct: 123 KYLPKLASGQWIGCFGLTEPNHGSDPGAMESRAVKVDGGYRLSGNKTWITNSPIADVLVV 182
Query: 218 FAR---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+A+ +I G++++K GL+ I K+GLR G+I++ V + D LP V
Sbjct: 183 WAKVVGGDDDGKIRGFILEKGMKGLSTPAIHGKVGLRASLTGEIVMADVEIADSQMLPHV 242
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ + L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M
Sbjct: 243 SGLRGPFTCLNSARFGIAWGALGAAESCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQ 302
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I + RL ++ ++G S+ K +A + L R++LGGNGI +F +
Sbjct: 303 TEITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGI 362
Query: 395 AK 396
A+
Sbjct: 363 AR 364
>gi|379764216|ref|YP_005350613.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare
MOTT-64]
gi|378812158|gb|AFC56292.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare
MOTT-64]
Length = 394
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D L+ +E+AVR VRE + + P +AE++E + P + K
Sbjct: 2 STKTPPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKG 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 62 FGQLGLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIWNFGSEE 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP +A + C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV
Sbjct: 122 QKQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLNGRKLWITNGSVADV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + + G++V G + I +K+ LR +++L V +P E LP
Sbjct: 182 AVVWA--NTDDGVRGFIVPTKTAGFSANTIHHKLSLRASITSELVLDDVRLPAEAMLPEA 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 240 QGLRGPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 300 VELHKGQLLSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 359
Query: 395 AK 396
+
Sbjct: 360 IR 361
>gi|49088442|gb|AAT51570.1| PA0447, partial [synthetic construct]
Length = 394
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQDKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 360
>gi|390567422|ref|ZP_10247760.1| glutaryl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389940613|gb|EIN02404.1| glutaryl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 395
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 188/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR ++ +AP + + + + + ++G L + G TI
Sbjct: 13 DDPLLLDQQLTEEERLVRESAHAYCQERLAPRVLDAFRREHTDADIFREMGELGLLGATI 72
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I GSE +QKYLP LA
Sbjct: 73 PETYGGAGLNYVCYGLVAREVERVDSGYRSMMSVQSSLVMVPINEFGSEATRQKYLPRLA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I C+ LTEP +GSD ++ T A KV+GG++L G K WI NS ADV V++A++
Sbjct: 133 RGEWIGCFGLTEPNHGSDPGSMITRAKKVDGGYLLTGSKMWITNSPIADVFVVWAKD-DE 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G+I++ VF P+E+ P + + L
Sbjct: 192 GAIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPDIRGLKGPFTCL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 252 NSARYGIAWGALGAAEDCWHRARQYVLDRKQFGKPLAANQLIQKKLADMQTEITLGLQGC 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 312 LRLGRMKDEGTAAVEITSIMKRNSCGKALDIARVARDMLGGNGISDEFGVAR 363
>gi|299771467|ref|YP_003733493.1| glutaryl-CoA dehydrogenase [Acinetobacter oleivorans DR1]
gi|298701555|gb|ADI92120.1| glutaryl-CoA dehydrogenase [Acinetobacter oleivorans DR1]
Length = 403
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QVALRFGRMKDEGIAAVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|113868775|ref|YP_727264.1| glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
gi|113527551|emb|CAJ93896.1| Glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
Length = 397
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 194/358 (54%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT++E+ VR + ++ P + + + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTADERMVRDAAAAYCQDKLMPRVLQSFRNEKTDVEIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGTEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVDGGYELTGAKMWITNSPIADVFVVWAKLQGD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 DGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVFVPEENIMPGVSGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|358451685|ref|ZP_09162118.1| glutaryl-CoA dehydrogenase [Marinobacter manganoxydans MnI7-9]
gi|357224154|gb|EHJ02686.1| glutaryl-CoA dehydrogenase [Marinobacter manganoxydans MnI7-9]
Length = 389
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 191/356 (53%), Gaps = 5/356 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D FD L E+ VR +R ++++ P + E +F + ++G L + G T+
Sbjct: 7 NDLLDFDSQLDETERQVRDSIRSFCDQQLMPGITEANRHEKFDRTIFNQMGELGMLGATL 66
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD++ + + V SSL M I G E K++ LP LA
Sbjct: 67 PEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSYGQEAMKKRILPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD + T A KV+GG++L G K WI NS AD+ V++A+
Sbjct: 127 SGEYVGCFGLTEPNHGSDPGGMETRAKKVDGGYLLSGSKTWITNSPIADIFVVWAK--FD 184
Query: 225 NQINGYLVKKD-APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
++NG++++++ A GL KIE K LR + G I + +VFVP+E+RL V +
Sbjct: 185 GKVNGFVIEREGAKGLDAPKIEGKFSLRASETGSIFMDEVFVPEENRLD-VEGLKGPFSC 243
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + Y ER QFG PLAA Q+ Q+KLV M I +
Sbjct: 244 LNKARFGISWGSLGAAEFCWHAARNYTLERIQFGKPLAANQLVQKKLVDMQTEITIGLQA 303
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ + G +TP SL K +A + + R++ GGNGI ++ V + +M
Sbjct: 304 VLQLGRMMDAGTVTPDAISLLKRNNCGKALDIARVARDMHGGNGISDEYHVIRHVM 359
>gi|148358690|ref|YP_001249897.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
gi|296108221|ref|YP_003619922.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
gi|148280463|gb|ABQ54551.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
gi|295650123|gb|ADG25970.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
Length = 382
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 190/351 (54%), Gaps = 4/351 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D+ L +E+ +R V + ++ P+MAE +E A FP +I K L + G T+ YG
Sbjct: 4 LDEQLHDDERMIRDSVSRFVSNDVIPLMAESYEHAHFPKELIKKSADLGLLGLTLPAEYG 63
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
S + E+ R D+ +F+ V SSL M I GSEEQK++YLP +A N I
Sbjct: 64 GAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPIFKFGSEEQKKRYLPEMAAGNII 123
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP GSD +++ T A K+EGGW+L G K WI N+ AD+ +++A+ T I G
Sbjct: 124 GCFGLTEPDSGSDPASMRTHAKKIEGGWVLNGAKMWITNAPIADIAIVWAK--TEAGIRG 181
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP-GVNSFQDTSKVLAVSR 288
++V + G++ +I+ K+ LR G+++ VFVPDE+ LP L+ +R
Sbjct: 182 FIVDTKSEGMSCPEIKLKMSLRASITGELVFDNVFVPDENLLPKSEKGLGAALSCLSQAR 241
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G +M +D+ YL ERKQF PLA+FQ+ Q+ L M I + ++
Sbjct: 242 YGIAWGAMGAAMACFDIARNYLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIG 301
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ TP SL K A + R L+GGNGI ++ V + ++
Sbjct: 302 RLKDQHRETPTMISLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHML 352
>gi|334342738|ref|YP_004555342.1| glutaryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
gi|334103413|gb|AEG50836.1| Glutaryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
Length = 394
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 181/353 (51%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D + DD LT +E+ +R R + + P + E +E + + ++GAL + G TI
Sbjct: 10 DDAFLLDDQLTDDERMIRDTARAYAQDNLQPRVMEAFEHEQTDPGIFREMGALGLLGPTI 69
Query: 106 KG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G S + E+ RVD+ + + V SSL M I GSEEQ+ KYLP LA
Sbjct: 70 PDQYGGVGASYVAYGLIAREVERVDSGYRSMMSVQSSLVMHPIYAYGSEEQRLKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-NTT 223
+ I C+ LTEP GSD + T ATK G+ L G K WI N+ ADV VI+A+ +
Sbjct: 130 SGDYIGCFGLTEPDAGSDPGGMRTRATKTPDGYRLSGNKTWISNAPIADVFVIWAKSDAH 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G++++K GL+ KIE K+ LR G + L +V V +E LP V +
Sbjct: 190 GGAIRGFVLEKGMKGLSAPKIEGKLSLRASITGMVNLDEVEVGEEALLPDVEGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R + W +G + + Y +RKQFG PLAA Q+ Q+KL ML +I +
Sbjct: 250 LNRARYGIGWGSMGAAEACFHAAREYGLDRKQFGRPLAATQLYQKKLADMLTDITLGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L + G P SL K +A + + R++ GGNGI ++ V +
Sbjct: 310 SLRVGRLMDDGRFAPEMVSLIKRNNVGKALDIARMARDMHGGNGISGEYPVMR 362
>gi|152986723|ref|YP_001345944.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
gi|150961881|gb|ABR83906.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
Length = 393
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQAKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 360
>gi|443307851|ref|ZP_21037638.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium sp. H4Y]
gi|442765219|gb|ELR83217.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium sp. H4Y]
Length = 394
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 38 ASKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK- 94
++K PP Y D L+ +E+AVR VRE + + P +AE++E + P + K
Sbjct: 2 STKTPPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKG 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEE
Sbjct: 62 FGQLGLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIWNFGSEE 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QKQ++LP +A + C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV
Sbjct: 122 QKQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLTGRKLWITNGSVADV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A T + + G++V G + I +K+ LR +++L V +P E LP
Sbjct: 182 AVVWA--NTDDGVRGFIVPTKTAGFSANTIHHKLSLRASITSELVLDDVRLPAEAMLPEA 239
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 240 KGLRGPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMA 299
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 300 VELHKGQLLSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPV 359
Query: 395 AK 396
+
Sbjct: 360 IR 361
>gi|119898221|ref|YP_933434.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
gi|119670634|emb|CAL94547.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 2/351 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D D LT E+ VR R ++++ P + E + + ++G L + G TI
Sbjct: 10 DPLHLDSQLTDVERMVRDTARAYCQEKLLPRVQEAFRHERTDREIFNEMGELGLLGPTIP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 EQYGGAGMNYISYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP +GSD ++ T A KV GG+ + G K WI NS ADV V++A++ +
Sbjct: 130 GEWVGCFGLTEPNHGSDPGSMITRAKKVPGGYSISGAKMWITNSPIADVFVVWAKDDEGD 189
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K GL+ I K+GLR G+I++ +VF P+E+ P V + L
Sbjct: 190 -IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLKGPFTCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + Y+ +Y +RKQFG PLAA Q+ Q+KL ML I +
Sbjct: 249 SARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLVQKKLADMLTEITLGLQACL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ +L + G S+ K +A + R++LGGNGI +F VA+
Sbjct: 309 QVGRLKDAGNAPVEITSIIKRNSCGKALDIARTARDMLGGNGISDEFCVAR 359
>gi|421670386|ref|ZP_16110384.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC099]
gi|410385065|gb|EKP37560.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC099]
Length = 406
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRYETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|336372510|gb|EGO00849.1| hypothetical protein SERLA73DRAFT_178810 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385325|gb|EGO26472.1| hypothetical protein SERLADRAFT_463568 [Serpula lacrymans var.
lacrymans S7.9]
Length = 443
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 185/357 (51%), Gaps = 6/357 (1%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
+ D + +L+ EE A+R RE ++ + P + E W +F ++P++G L + G T
Sbjct: 45 SDDPLNLESMLSEEEVAIRDTAREYCQENLFPRVLEGWRTEQFNHDILPEMGKLGLLGPT 104
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGC G + + EI RVD+ + V SSL M I GS+ QK+KYLP LA
Sbjct: 105 IQGYGCAGVNNVSYGLIAREIERVDSGYRSTASVQSSLVMHPINEFGSDLQKEKYLPRLA 164
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ + C+ LTEP +GSD + + TTA + +GG+I+ G K WI N+ ADV +I+AR
Sbjct: 165 KGELVGCFGLTEPNHGSDPAGMETTAEETDGGFIINGSKTWISNAPVADVFIIWARCKWD 224
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
++ G++++K GL I+NK+ LR G I + V V + LP L
Sbjct: 225 EKVRGFILEKGMKGLEAPAIKNKVALRASITGSIFMDSVKVTHDALLPKAKGLSAAFSCL 284
Query: 285 AVSRVMVAWQPIGISMGVYDMCH---RYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
+R ++W G+ + D H Y ERKQF PLA+FQ+ Q+KLV + +
Sbjct: 285 NSARYGISW---GVMGALEDCIHWTLAYALERKQFKRPLASFQLVQKKLVDAQSEVALGL 341
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVI 398
++ +L + G + P S+ K +A + ++LGGN ++ V + +
Sbjct: 342 QASLQVGRLKDAGKLAPEMVSMVKRNNCGKALQHARTILDILGGNACSDEYHVGRHV 398
>gi|421151514|ref|ZP_15611126.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
gi|404527197|gb|EKA37370.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQDKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++KD GL+ I K+ LR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKDWEGLSAPAIHGKVVLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 360
>gi|111019296|ref|YP_702268.1| glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
gi|110818826|gb|ABG94110.1| probable glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length = 390
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 189/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL +EE A+R VR +++I P + E++E A P + + LG L V
Sbjct: 4 PQSLTQLFALDSLLDTEEIAIRDTVRRFSDEKIRPHIGEWFEAAALPVRELAEGLGELGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSE+QKQ++L
Sbjct: 64 LGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIHHYGSEDQKQEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + + T A + WIL G K WI N + ADV V++AR
Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTGAKRDGDDWILNGTKMWITNGSVADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + I G++V D PG + +I++K+ LR +++L+ V +P+ LP
Sbjct: 184 --TDDGIRGFVVPTDTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++R+ F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIADMALEVGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G P S GK RE +A+ RE +LG NGI ++ V +
Sbjct: 302 HLLAYHLGRLKDRGVARPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPVIR 357
>gi|116626102|ref|YP_828258.1| acyl-CoA dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229264|gb|ABJ87973.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 381
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 56 TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHS 114
T E+ +R VRE E EIAP + E+ E FP VI KLG L G + G G
Sbjct: 6 TPEQIQLRKAVREFAEAEIAPHVMEWDEAQTFPLDVIRKLGRLGYMGSIFPEELGGAGLG 65
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
+I I E++RVD S + H+SL I GS+EQ+++YLP LA I CW+L
Sbjct: 66 YIEYSIIIEELSRVDGSVGIILAAHTSLCSNHIFKMGSDEQRRRYLPKLASGEWIGCWSL 125
Query: 175 TEPAYGSDASALNTTA-TKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
TEP GSDA+ T A T GGW+L G K + N+ +ADV V A R + I+ +
Sbjct: 126 TEPEAGSDAAGTRTHAETDESGGWVLNGSKTFTTNAHYADVCVAMAVTDRAAAQHGISAF 185
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS-FQDTSKVLAVSRV 289
L++KD PG K ENK+GLR G+++ + + L +N F + KVL R+
Sbjct: 186 LIEKDTPGYRCGKKENKLGLRASATGEVIFENCRLGPTQLLGKLNDGFVASLKVLDGGRI 245
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+A IG++ G YD RY K RKQFG P++ FQ Q KLV M ++ A L+ +R
Sbjct: 246 SIAALSIGMAQGAYDAALRYSKLRKQFGRPISEFQAIQHKLVDMAVDLDAARLLNYRAAW 305
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G +S+ K + + A ++ GG G + D+ V K
Sbjct: 306 MLDRGMRVTRESSMAKLFASEAAVRIAGEAVQIHGGYGFIKDYPVEK 352
>gi|406040799|ref|ZP_11048154.1| glutaryl-CoA dehydrogenase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 408
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 189/357 (52%), Gaps = 7/357 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRE-CMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D + + LT EE+ +R C +K + ++ ++ + P + ++G L + G T
Sbjct: 19 EDPFLLEQQLTEEERMIRDSAHAYCQDKLMTRVLEQFRHETTDP-TIFREMGELGLLGPT 77
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG G + + E+ RVD+ + V SSL M+ I G+EEQKQKYLP L
Sbjct: 78 IPEQYGGAGLNYVSYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGTEEQKQKYLPKL 137
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 ATGEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVS 197
Query: 224 TN----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+I G++++K GL+ I K+GLR G+I++ VFVP+E+ P V +
Sbjct: 198 AEGNVGEIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPDVRGLKG 257
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 258 PFTCLNSARYGIAWGAMGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEIAL 317
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R ++ ++G SL K +A + L R+++GGNGI +F VA+
Sbjct: 318 GLQAALRFGRMKDEGIAAVEGTSLIKRNNCGKALDIARLARDMMGGNGISDEFGVAR 374
>gi|397731695|ref|ZP_10498442.1| glutaryl-CoA dehydrogenase [Rhodococcus sp. JVH1]
gi|396932503|gb|EJI99665.1| glutaryl-CoA dehydrogenase [Rhodococcus sp. JVH1]
Length = 390
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 189/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL +EE A+R VR +++I P + E++E A P + + LG L V
Sbjct: 4 PQSLTQLFALDSLLDTEEIAIRDTVRRFSDEKIRPHIGEWFEAAALPVRELAEGLGELGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSE+QKQ++L
Sbjct: 64 LGMHLEGYGCAGTSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIHHYGSEDQKQEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + + T A + WIL G K WI N + ADV V++AR
Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTGAKRDGDDWILNGTKMWITNGSVADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + I G++V D PG + +I++K+ LR +++L+ V +P+ LP
Sbjct: 184 --TDDGIRGFVVPTDTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++R+ F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIADMALEVGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G P S GK RE +A+ RE +LG NGI ++ V +
Sbjct: 302 HLLAYHLGRLKDRGVARPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPVIR 357
>gi|77456345|ref|YP_345850.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
gi|77380348|gb|ABA71861.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ E + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLEIARMARDMLGGNGISDEFGVAR 360
>gi|440227689|ref|YP_007334780.1| glutaryl-CoA dehydrogenase [Rhizobium tropici CIAT 899]
gi|440039200|gb|AGB72234.1| glutaryl-CoA dehydrogenase [Rhizobium tropici CIAT 899]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 192/352 (54%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + L+ +E+ V ++++AP + E + + + ++G L + G TI
Sbjct: 9 ADPFRLTEQLSDDERMVLDTAHSYAQEKLAPRVLEAFRHEKTDPAIFREMGELGLLGPTI 68
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G S + E+ RVD+ + + V SSL M+ I G++ QKQKYLP LA
Sbjct: 69 SPEYGGAGLSYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIETFGADAQKQKYLPKLA 128
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI N+ ADV V++A+ T
Sbjct: 129 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLTGAKTWISNAPIADVFVVWAK-TED 187
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ +P V+ + L
Sbjct: 188 GLIRGFILEKGWKGLSAPAIHGKVGLRASVTGEVVMDNVFVPEENLMPNVSGLKGPFTCL 247
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y+ +RKQFG PLAA Q+ Q+KL M+ I +
Sbjct: 248 NSARFGIAWGALGAAEDCYAKARQYVLDRKQFGRPLAANQLIQKKLADMVTEITLGLQGC 307
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A + R++LGGNGI +F +A+
Sbjct: 308 LRLGRMKEEGHPPVELTSILKRNSCGKALDIARAARDMLGGNGISDEFGIAR 359
>gi|398986261|ref|ZP_10691449.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM24]
gi|399012674|ref|ZP_10714992.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM16]
gi|398114918|gb|EJM04713.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM16]
gi|398152508|gb|EJM41026.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM24]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|420253024|ref|ZP_14756090.1| acyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398052858|gb|EJL45096.1| acyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 395
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
D D LT EE+ VR ++ +AP + + + + + ++G L + G TI
Sbjct: 13 DDPLLLDQQLTEEERLVRESAHAYCQERLAPRVLDAFRREHTDADIFREMGELGLLGATI 72
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I GSE +QKYLP LA
Sbjct: 73 PETYGGAGLNYVCYGLVAREVERVDSGYRSMMSVQSSLVMVPINEFGSEATRQKYLPRLA 132
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I C+ LTEP +GSD ++ T A +V+GG++L G K WI NS ADV V++A++
Sbjct: 133 RGEWIGCFGLTEPNHGSDPGSMITRAKRVDGGYLLTGSKMWITNSPIADVFVVWAKDDE- 191
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G+I++ +VF P+E+ P + + L
Sbjct: 192 GAIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPDIRGLKGPFTCL 251
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y+ +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 252 NSARYGIAWGALGAAEDCWHRARQYVLDRKQFGKPLAANQLIQKKLADMQTEITLGLQGC 311
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 312 LRLGRMKDEGTAAVEITSIMKRNSCGKALDIARVARDMLGGNGISDEFGVAR 363
>gi|121604041|ref|YP_981370.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120593010|gb|ABM36449.1| acyl-CoA dehydrogenase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 398
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 191/360 (53%), Gaps = 11/360 (3%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGG 103
D + + LT +E+AV+ ++++ P +MA EK F ++ + GA+ G
Sbjct: 8 EDPFFLSEQLTDDERAVQEAANAFCQEKLQPRVLMAARHEK--FDREIMNEAGAMGFLGS 65
Query: 104 TIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
TI+GYGC G + + E+ RVD+ + I V SSL M I GSE Q+QKYLP L
Sbjct: 66 TIEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPINAYGSEAQRQKYLPKL 125
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP +GSD +++ T A V+GG+IL+G K WI NS ADV V++A+
Sbjct: 126 ATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGYILKGAKMWITNSPIADVFVVWAKLED 185
Query: 224 T-------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
I G++++K GL+ KIE K+ LR G+I++ VFVP E+ LP V+
Sbjct: 186 AGGKVGGQEAIRGFVLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPSENLLPNVSG 245
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L +R +AW +G + + +Y +R QFG PLA Q+ Q+KL M
Sbjct: 246 LKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRVQFGRPLAQTQLIQKKLADMQTE 305
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I + R+ +L ++ P SL K ++ + + R++ GGNGI ++ V +
Sbjct: 306 ITLGLQACLRVGRLMDEDRAVPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIR 365
>gi|91787553|ref|YP_548505.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
gi|91696778|gb|ABE43607.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
Length = 398
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 190/351 (54%), Gaps = 11/351 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPG 112
L+ +E+A+ E ++++ P +MA EK F ++ + GA+ G TI+GYGC G
Sbjct: 17 LSDDERAIVHAAHEFCQEKLQPRVLMAARHEK--FDREIMNEAGAMGFLGSTIEGYGCAG 74
Query: 113 HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACW 172
+ + E+ RVD+ + I V SSL M I GSE Q+QKYLP LA + C+
Sbjct: 75 LNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQKYLPKLATGEWVGCF 134
Query: 173 ALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN------- 225
LTEP +GSD +++ T A V+GG+IL+G K WI NS ADV V++A+ +
Sbjct: 135 GLTEPNHGSDPASMLTRAKPVDGGFILKGSKMWITNSPIADVFVVWAKLEDPDGKVGGQE 194
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G+L++K GL+ KIE K+ LR G+I++ VFVP+ + LP V+ + L
Sbjct: 195 SIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLLPNVSGLKGPFGCLN 254
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +R+QFG PLA Q+ Q+KL M I +
Sbjct: 255 KARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLADMQTEITLGLQACL 314
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++ P SL K ++ + + R++ GGNGI ++ V +
Sbjct: 315 RVGRLMDEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIR 365
>gi|423195725|ref|ZP_17182308.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila SSU]
gi|404633137|gb|EKB29702.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila SSU]
Length = 391
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 195/358 (54%), Gaps = 11/358 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L EE+ +R R+ + + P + E + +F ++ +LG L + G T+
Sbjct: 10 DPFFLDSQLGEEERLIRDAARDYCQARLMPRVLEANRREQFDRTIMNELGELGLLGATLP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + + E+ RVD+ + + V SSL M I G E Q+Q++LP LA+
Sbjct: 70 EQYGCAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGDEAQRQRWLPGLAR 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ + A +VEGG++L G K WI NS AD+ V++A+
Sbjct: 130 GELVGCFGLTEPDAGSDPGSMKSRAERVEGGYLLTGNKMWITNSPIADLFVVWAK--LDG 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KIE K LR G+I++++VFVP+ +RL GV+ + L
Sbjct: 188 EITGFVLEKGMTGLSAPKIEGKFSLRASITGEIVMERVFVPEANRLAGVSGLKGPFGCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +R+QFG PLAA Q+ Q KL N+Q I +G
Sbjct: 248 KARYGIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKLA----NMQTEIALGL 303
Query: 346 RLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ C +L ++G SL K +A E + R++ GGNGI +F V + +M
Sbjct: 304 QGCLQAGRLMDEGRCPVELVSLIKRNSCGKALEIARVARDMHGGNGISDEFHVIRHVM 361
>gi|358451851|ref|ZP_09162284.1| glutaryl-CoA dehydrogenase [Marinobacter manganoxydans MnI7-9]
gi|357224320|gb|EHJ02852.1| glutaryl-CoA dehydrogenase [Marinobacter manganoxydans MnI7-9]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT +E+ VR R+ E ++ P + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEDERMVRESARQFAESKLRPRVLEAFRNEQTDPEIFREMGETGLLGCTIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+EE +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGNEETRQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD + A KV+GG+ L G K WI NS ADV V++A++ I G
Sbjct: 135 GCFGLTEPDHGSDPGNMAARARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDD-GAIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDGVFVPEENAFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +RKQFG PLAA Q+ Q+KL M +I + RL +
Sbjct: 254 GISWGSLGAAEDCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTDITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDVARLARDMLGGNGISDEFGVAR 360
>gi|410622887|ref|ZP_11333708.1| glutaryl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410157562|dbj|GAC29082.1| glutaryl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 389
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 186/343 (54%), Gaps = 4/343 (1%)
Query: 56 TSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGH 113
T +E+ ++ E + ++ P +MA EK F ++ K+G + G TI+GYGC G
Sbjct: 16 TEDEKLIQQAAYEFAQTQLMPGILMANRHEK--FDPSIMLKMGEAGLLGSTIQGYGCAGI 73
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + EI RVD+ + + V SSL M I L G+E+QKQKYLP LA I C+
Sbjct: 74 NYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPINLFGNEQQKQKYLPKLATGEWIGCFG 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVK 233
LTEP GSD +++ + A KV+GG++L G K WI NS ADV V++A+ +I G+++
Sbjct: 134 LTEPDAGSDPASMKSLAKKVDGGYLLSGSKMWITNSPIADVFVVWAKKQEDGKIYGFILD 193
Query: 234 KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAW 293
K GL+ KIE K L+ G+I+++ VFV ++ LP V+ + L ++R ++W
Sbjct: 194 KGMEGLSAPKIEGKQSLKASITGEIVMQNVFVTEQHILPKVSGLKGPFSCLNMARYGISW 253
Query: 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK 353
+G + + +Y +RKQF PLA Q+ Q KL M I + R+ +L ++
Sbjct: 254 GALGAAEFCWHAARQYGLDRKQFNKPLAQTQLFQTKLADMQTEITLGLQASLRVGRLIDE 313
Query: 354 GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
P S+ K A++ + R++ GGNGI +F V +
Sbjct: 314 KQYDPAMISMVKRNNCAKSLDIARKARDMHGGNGISDEFHVIR 356
>gi|408676057|ref|YP_006875884.1| Glutaryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
gi|328880386|emb|CCA53625.1| Glutaryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
Length = 398
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 186/354 (52%), Gaps = 9/354 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D D LLT EE+ +R VR ++E+ P +A ++EK E P + + LG + V G +
Sbjct: 17 DLLAVDGLLTDEEREIRGTVRALADRELRPHVAGWFEKGEIPARELARTLGRVGVLGMHL 76
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + +A E+ VD+ + + V SLAM I GSEEQKQ++LP +A
Sbjct: 77 EGYGCAGTNAVAYGLACLELEAVDSGLRSLVSVQGSLAMYAIWKYGSEEQKQRWLPKMAA 136
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD A+ T A + WIL G K WI N + ADV V++AR T +
Sbjct: 137 GEYIGCFGLTEPDAGSDPGAMRTNAKRDGSDWILNGTKMWITNGSVADVAVVWAR--TED 194
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+LV PG + +I+ K+ LR +++L+ V +P + LP L
Sbjct: 195 GVRGFLVPAGTPGFSAPEIKMKLSLRASVTSELVLEDVRLPADAMLPEARGLSGPLGCLN 254
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + + +G + + Y ++R F LA++Q+ QQKL M + +L+
Sbjct: 255 EARFGIVFGALGAARDCLETAVSYARDRTVFARSLASYQLTQQKLADMAVELGKGMLLAL 314
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L +L + GA+T S+GK RE +A+ RE +LG NGI ++ V +
Sbjct: 315 HLGRLKDAGALTAEQISVGK---LNNVREAIAIARECRTILGANGITLEYPVLR 365
>gi|330806831|ref|YP_004351293.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423694664|ref|ZP_17669154.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Q8r1-96]
gi|327374939|gb|AEA66289.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004419|gb|EIK65732.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Q8r1-96]
Length = 393
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEIGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|407367590|ref|ZP_11114122.1| glutaryl-CoA dehydrogenase [Pseudomonas mandelii JR-1]
Length = 393
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|15807996|ref|NP_285660.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
gi|6460740|gb|AAF12445.1|AE001863_70 glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
Length = 386
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 185/355 (52%), Gaps = 3/355 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-HVIPKLGALRVAGGTI 105
DY++ DL++ +E+ + R+ ++ EI P + ++WE P ++ K+G+L + G T
Sbjct: 3 DYFKMLDLVSPDERDIHAATRKFVDAEIIPHIGDWWEHESAPTRELMRKMGSLGLLGPTT 62
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S T + E+ R D+ + V SL M I GSEEQK+++LP LA
Sbjct: 63 PEQYGGAGTSYTAYGLICYELERADSGLRSAASVQGSLVMHPINEYGSEEQKKQWLPGLA 122
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP GSD + T A K G ++L G K WI NS ADV V++A++
Sbjct: 123 SGELIGCFGLTEPDGGSDPGGMRTRARKDGGDYVLNGSKMWITNSPLADVAVVWAKDDE- 181
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ + G++V +DA G + KI +K+ LR G+I+L+ +P E+ LPG + L
Sbjct: 182 DVVRGFIVPRDARGFSTPKIGHKMSLRASTTGEIVLEDCRIPAENLLPGSRGLKSPLGCL 241
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G V Y R FG P+AA Q+ Q+KL M L+
Sbjct: 242 TSARSGIAWGAMGALESVLTASLEYAGSRTTFGRPIAARQLVQEKLAWMATQHSLGSLLA 301
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
WRL L + G M S+ K A E + RE+ GGNGI +++ V + ++
Sbjct: 302 WRLGNLKDGGQMNYAQVSVAKGNNVRVALEGARMAREIHGGNGITTEYPVIRHML 356
>gi|411010269|ref|ZP_11386598.1| glutaryl-CoA dehydrogenase [Aeromonas aquariorum AAK1]
Length = 391
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 195/358 (54%), Gaps = 11/358 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L EE+ +R R+ + + P + E + +F ++ +LG L + G T+
Sbjct: 10 DPFFLDGQLGEEERLIRDAARDYCQARLMPRVLEANRREQFDRTIMNELGELGLLGATLP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + + E+ RVD+ + + V SSL M I G E Q+Q++LP LA+
Sbjct: 70 EQYGCAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGDEAQRQRWLPGLAR 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ + A +VEGG++L G K WI NS AD+ V++A+
Sbjct: 130 GELVGCFGLTEPDAGSDPGSMKSRAERVEGGYLLTGNKMWITNSPIADLFVVWAK--LDG 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KIE K LR G+I++++VFVP+ +RL GV+ + L
Sbjct: 188 EITGFVLEKGMTGLSAPKIEGKFSLRASITGEIVMERVFVPEANRLAGVSGLKGPFGCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +R+QFG PLAA Q+ Q KL N+Q I +G
Sbjct: 248 KARYGIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKLA----NMQTEIALGL 303
Query: 346 RLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ C +L ++G SL K +A E + R++ GGNGI +F V + +M
Sbjct: 304 QGCLQAGRLMDEGRCPVELVSLIKRNSCGKALEIARVARDMHGGNGISDEFHVIRHVM 361
>gi|194363937|ref|YP_002026547.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
maltophilia R551-3]
gi|194346741|gb|ACF49864.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
R551-3]
Length = 397
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 189/356 (53%), Gaps = 13/356 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D + LL+ EE+AV+ V ++ + PI+ + +++A FP ++P++ +L + G T+
Sbjct: 17 DLFDVRSLLSEEERAVQESVARFTDERVLPIIGDAFDQARFPSELVPEIASLGLLGATLP 76
Query: 107 G-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
G YG + E+ R D+ +F+ V SSL M I GSEEQ++++LP++A+
Sbjct: 77 GEYGGGDLGAVSYGLICQELERGDSGLRSFVSVQSSLCMYPIYAYGSEEQRRQWLPAMAR 136
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTE GSD +++ T A + W + G K WI + AD+ +++A+ T +
Sbjct: 137 GELIGCFGLTEAHGGSDPASMKTRAVRDGDDWRINGSKMWITSGPVADLAIVWAQ--TED 194
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K PG T +I++K+ LR G + V VPD RLP V + L
Sbjct: 195 GIQGFVLEKGMPGFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLT 254
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R ++W PIG ++ D Y KER FG PLAA Q Q KL +M I L+
Sbjct: 255 QARFGISWGPIGSAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITMAQLLAL 314
Query: 346 RLCKLYEKGAMTPGHASLGKSWITAR-----ARETVALGRELLGGNGILSDFLVAK 396
+L +L E G + P SL K W R ARE R+LLGG GI ++ + +
Sbjct: 315 QLGRLKEAGQLQPQQVSLAK-WNNCRMAIDIAREC----RDLLGGAGITTEHVAIR 365
>gi|398880895|ref|ZP_10635913.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM67]
gi|398883409|ref|ZP_10638366.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM60]
gi|398190968|gb|EJM78173.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM67]
gi|398197071|gb|EJM84061.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM60]
Length = 393
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDEGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|90422551|ref|YP_530921.1| acyl-CoA dehydrogenase-like protein [Rhodopseudomonas palustris
BisB18]
gi|90104565|gb|ABD86602.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
Length = 396
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 192/361 (53%), Gaps = 8/361 (2%)
Query: 43 PCASDYYQFDDLL------TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
P ++++DD L T +E+AVR ++++ P + + + + V +G
Sbjct: 4 PPPRQHFRWDDPLSLDGQITEDERAVRDTAHAYCQEQLLPRVVQAFRHEQTDEGVFRSMG 63
Query: 97 ALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
L + G TI + +G G + + E+ RVD+ + + V SSL M+ I G+E
Sbjct: 64 ELGLLGATIPETFGGAGLNHVCYGLIAREVERVDSGYRSMMSVQSSLVMVPILEFGNEAT 123
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
+QKYLP LA I C+ LTEP +GSD + + A KV+GG+ L G K WI NS ADV
Sbjct: 124 RQKYLPKLATGEWIGCFGLTEPDHGSDPGGMISRARKVDGGYRLSGAKMWITNSPIADVF 183
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A++ +I G++++K PGL+ I K+GLR G+I+L VF P+E+ P V
Sbjct: 184 VVWAKDDA-GEIRGFVLEKGWPGLSAPAIHGKVGLRASITGEIVLDDVFCPEENAFPEVR 242
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L +R +AW +G + Y +Y+ +RKQFG PLA Q+ Q+KL ML
Sbjct: 243 GLKGPFTCLNSARYGIAWGALGAAEDCYLRARQYVLDRKQFGRPLATNQLVQKKLADMLT 302
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
I + RL +L ++GA S+ K +A E R+++GGNGI +F VA
Sbjct: 303 EITLGLQGCLRLGRLKDEGAAPVEITSIMKRNSCGKALEIARAARDMMGGNGISDEFGVA 362
Query: 396 K 396
+
Sbjct: 363 R 363
>gi|397665166|ref|YP_006506704.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor (GCD)
[Legionella pneumophila subsp. pneumophila]
gi|395128577|emb|CCD06793.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor (GCD)
[Legionella pneumophila subsp. pneumophila]
Length = 381
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 190/351 (54%), Gaps = 4/351 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D+ L +E+ +R V + ++ P+MAE +E A FP +I K L + G T+ YG
Sbjct: 3 LDEQLHDDERMIRDSVSRFVSNDVIPLMAESYEHAHFPKELIKKSADLGLLGLTLPAEYG 62
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
S + E+ R D+ +F+ V SSL M I GSEEQK++YLP +A N I
Sbjct: 63 GAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPIFKFGSEEQKKRYLPEMAAGNII 122
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP GSD +++ T A K++GGWIL G K WI N+ AD+ +++A+ T I G
Sbjct: 123 GCFGLTEPDSGSDPASMRTHAKKIDGGWILNGAKMWITNAPIADIAIVWAK--TEAGIRG 180
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP-GVNSFQDTSKVLAVSR 288
++V + G++ +I+ K+ LR G+++ VFVPDE+ LP L+ +R
Sbjct: 181 FIVDTKSEGMSCPEIKLKMSLRASITGELVFDNVFVPDENLLPKSEKGLGAALSCLSQAR 240
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G +M +D+ YL ERKQF PLA+FQ+ Q+ L M I + ++
Sbjct: 241 YGIAWGAMGAAMACFDIARDYLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIG 300
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+L ++ TP SL K A + R L+GGNGI ++ V + ++
Sbjct: 301 RLKDQHRETPTMISLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHML 351
>gi|402821757|ref|ZP_10871278.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas sp.
LH128]
gi|402264692|gb|EJU14534.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas sp.
LH128]
Length = 394
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 185/353 (52%), Gaps = 2/353 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
SD + FDD LT EE+ VR + E+ P + + + + P +G + G TI
Sbjct: 10 SDPFNFDDQLTEEERMVRDAAHGFAQGELQPRVINAFREELDAAELFPLMGQAGLLGATI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + EI RVD+ + V SSL M I GSEEQ+ KYLP LA
Sbjct: 70 PQSYGGAGAGYVSYGLIAREIERVDSGYRSMASVQSSLVMYPIFAFGSEEQRFKYLPGLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ I C+ LTEP GSD + + T A +++GG++L G K WI N+ FADV V++A++
Sbjct: 130 AGSLIGCFGLTEPDAGSDPAGMRTIAKRIDGGYVLSGIKTWISNAPFADVFVVWAKSEAH 189
Query: 225 N-QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++++K GL+ KI+ K+ LR G IL+ +V V +E LPGV +
Sbjct: 190 DGAICGFVLEKGLKGLSAPKIKGKLSLRASTTGMILMDEVEVDEEALLPGVQGLKGPFDC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + +Y +R QFG PLAA Q+ Q+KL M +I +
Sbjct: 250 LNRARYGISWGALGAAEYCMHAARQYGLDRHQFGKPLAANQLYQKKLADMQTDIALGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R+ +L ++G P SL K ++ + R++ GGNGI ++ V +
Sbjct: 310 SLRVGRLMDEGRFAPEMVSLVKRNNVGKSLDIARHARDMHGGNGISDEYQVMR 362
>gi|398847691|ref|ZP_10604583.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398251324|gb|EJN36589.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 393
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLSGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FMLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPEVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|227548733|ref|ZP_03978782.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079200|gb|EEI17163.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
44291]
Length = 401
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 194/359 (54%), Gaps = 5/359 (1%)
Query: 33 PQATPASKFP-PCASDYYQ-FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH 90
PQ T P +DYY+ FDD+ ++ + + K R+ E P + + WEKAE+
Sbjct: 5 PQFTEFQGIPLDPRTDYYRIFDDVDGADLEWWK-KARDFCEF-ARPFVNDAWEKAEYNIP 62
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
+ + I G P S+ + E +R+DAS +T V + LAM +I
Sbjct: 63 GAEEAARRGLIRDGIDIEGQPAMSIRAKRMIGMEASRLDASTATAFGVQAGLAMQSINSF 122
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
G++EQK KYL ++++ +ALTEP +GSD+ AL TTA + W++ G+K+WIG+ +
Sbjct: 123 GTDEQKAKYLGPMSRMEIRGAFALTEPDHGSDSIALETTAKRDGDDWVINGEKKWIGHGS 182
Query: 211 FADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR 270
+ V++AR ++ ++V +D G T I K LR + +I L V V D+ R
Sbjct: 183 VGHITVVYAR-MEDGKVGAFIVDQDQEGYEATTITGKGSLRGIPQAEIKLNNVRVSDDRR 241
Query: 271 LPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKL 330
LPG SF+DT+KVL +R+ VAW +G+++ Y+ +Y ER QFG PL QI QQ+L
Sbjct: 242 LPGCKSFRDTAKVLMSTRIGVAWSALGLAIDCYEKVLKYASERHQFGRPLIKNQIIQQRL 301
Query: 331 VQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
ML ++ M L RL +L E G +T A+L K T AR A R++ GG GIL
Sbjct: 302 ADMLMDVTGMALYCKRLLELEESGEVTEQQAALAKVHNTRAARRVAANARDMFGGVGIL 360
>gi|15791260|ref|NP_281084.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
gi|10581893|gb|AAG20564.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
Length = 337
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 160/300 (53%), Gaps = 2/300 (0%)
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+G + + GYG P S T + + E+ D+ + V +L M I GSE
Sbjct: 1 MGEMGFYAPNLDGYGLPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAFGSEA 60
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK+++LP+L + C+ LTEP +GS+ SA+ TTA ++L G K WI NS ADV
Sbjct: 61 QKERWLPALGAGEAVGCFGLTEPEHGSNPSAMETTAEPDGDEYVLNGSKTWITNSPIADV 120
Query: 215 LVIFARNTTTN--QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V++AR+ + + G+LV+ D G+T +I+ K+ LR G+I L+ V VP E RLP
Sbjct: 121 AVVWARDHGEDGTPVRGFLVETDRDGVTTNEIDEKLSLRASITGEISLRNVRVPAESRLP 180
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
GV + L +R +AW +G + ++ Y +R+QF P+ FQ+ Q KL +
Sbjct: 181 GVEGMKGPLSCLTQARYGIAWGAVGAARNCFETAREYATDREQFDQPIGGFQMQQDKLAE 240
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M I L+ RL L E+G + P H S+ K AR+ + RE+LGGNGI +D+
Sbjct: 241 MATQITTSQLLAHRLAGLKERGDLRPQHVSMAKRNNVRMARDQARVAREMLGGNGITTDY 300
>gi|417548720|ref|ZP_12199801.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-18]
gi|417563801|ref|ZP_12214675.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC143]
gi|421625161|ref|ZP_16066017.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC098]
gi|421675220|ref|ZP_16115145.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC065]
gi|421677216|ref|ZP_16117109.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC111]
gi|421692812|ref|ZP_16132462.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-116]
gi|445440795|ref|ZP_21441839.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-A-92]
gi|395555557|gb|EJG21558.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC143]
gi|400389019|gb|EJP52091.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-18]
gi|404559457|gb|EKA64714.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-116]
gi|408699586|gb|EKL45062.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC098]
gi|410382767|gb|EKP35306.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC065]
gi|410393494|gb|EKP45847.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC111]
gi|444765574|gb|ELW89865.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-A-92]
Length = 406
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|444430667|ref|ZP_21225842.1| glutaryl-CoA dehydrogenase [Gordonia soli NBRC 108243]
gi|443888510|dbj|GAC67563.1| glutaryl-CoA dehydrogenase [Gordonia soli NBRC 108243]
Length = 395
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 188/358 (52%), Gaps = 10/358 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-HVIPKLGALRVAGGT 104
++ + DDL+ +E+A+ VRE K + P +AE++E E P V +LG + V G
Sbjct: 8 NELFGLDDLIDDDERAIADTVRELGRKRLRPHVAEWFESGELPVREVAAELGEIGVFGMH 67
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ GYGC G S T +A E+ VD+ +F+ V SL+M I GSEEQ++++LP +A
Sbjct: 68 LDGYGCAGTSATSYGLACLELEAVDSGLRSFVSVQGSLSMFAIRAFGSEEQREEWLPRMA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
+ + C+ LTEP +GS+ + + T+A + W+L G K WI N + ADV V++AR
Sbjct: 128 RGEALGCFGLTEPDFGSNPAGMRTSAKRDGDDWVLNGSKMWITNGSVADVAVVWARTDLE 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ + G++V + PG + ++I K+ LR +++L+ V +P LPGV +
Sbjct: 188 EGSRGVRGFVVPTNTPGFSASEITKKLSLRASVTAELVLEDVRLPASAMLPGVEGLKGPL 247
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + +G + + Y +R+ F L+ +Q+ Q KL M +
Sbjct: 248 SCLNEARFGIVFGAVGAARDCLETALSYADDREVFDKSLSGYQLTQAKLADMAVELGKAH 307
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ L + + G + P SLGK RE +A+ RE +LG NGI ++ V +
Sbjct: 308 LLALHLGRRKDAGTLRPEQISLGK---LNNVREAIAIARECRTILGANGITLEYPVIR 362
>gi|378719724|ref|YP_005284613.1| putative glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans
VH2]
gi|375754427|gb|AFA75247.1| putative glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans
VH2]
Length = 394
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 184/354 (51%), Gaps = 10/354 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGT 104
+ + D LL ++E A+R VR+ ++ + P + +++EK P + K LGAL G
Sbjct: 7 TQLFALDSLLDADEIAIRDTVRKFGQERLRPHIGDWFEKGALPARELAKELGALGALGMH 66
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQKQ++LP +A
Sbjct: 67 LEGYGCPGTSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKQEWLPRMA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GS+ + + T A + W+L G K WI N + ADV V++A+
Sbjct: 127 AGEAIGCFGLTEPDFGSNPAGMRTNAKRDGDDWVLNGTKMWITNGSIADVAVVWAQTDLE 186
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ I G++V D PG + +I K+ LR +++L V +P LP +
Sbjct: 187 ESPRGIRGFVVPTDTPGFSAPEITKKMSLRASVTSELVLDDVRLPASAMLPEAAGLRGPL 246
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + IG + + Y + R F PLAA+QI Q K+ M +
Sbjct: 247 TSLGEARFGIIFGAIGAARDCLETAVEYSQSRAVFDKPLAAYQITQTKIADMALEVGKGH 306
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDF 392
L+ + L +L ++G + P S GK RE +A+ RE +LG NGI ++
Sbjct: 307 LLAYHLGRLKDRGELRPEQVSTGK---LNNVREAIAIARECRTILGANGITLEY 357
>gi|357417478|ref|YP_004930498.1| glutaryl-CoA dehydrogenase [Pseudoxanthomonas spadix BD-a59]
gi|355335056|gb|AER56457.1| glutaryl-CoA dehydrogenase [Pseudoxanthomonas spadix BD-a59]
Length = 393
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 188/360 (52%), Gaps = 2/360 (0%)
Query: 38 ASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGA 97
ASK D D LT EE+ VR R +AP + + + + + ++G
Sbjct: 2 ASKASFNWQDPLLLDQQLTDEERMVRDSARRFAADRLAPRVLQAFRHEQTDSAIFREMGE 61
Query: 98 LRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
+ G TI + YG G + + E+ R+D+ + + V SSL M+ I GSE +
Sbjct: 62 TGLLGPTIPEAYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPIHEFGSEATR 121
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
QKYLPSLA +I C+ LTEP +GSD A+ + A KV+GG+ L G K WI NS ADV V
Sbjct: 122 QKYLPSLASGQSIGCFGLTEPDHGSDPGAMISRARKVDGGYRLSGAKMWITNSPIADVFV 181
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
++A++ QI G++++K GL+ I K+GLR G+I++ VF P+E+ P V
Sbjct: 182 VWAKD-DAGQIRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFCPEENAFPEVRG 240
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGN 336
+ L +R ++W +G + + +Y +RKQFG PLA Q+ Q+KL M
Sbjct: 241 LRGPFTCLNAARYGISWGALGAAEACWHTARQYTLDRKQFGRPLAQTQLIQKKLADMQTE 300
Query: 337 IQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
I + RL ++ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 301 ITLGLQGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|398997254|ref|ZP_10700082.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM21]
gi|398124349|gb|EJM13861.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM21]
Length = 393
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMIARARKVEGGYSLTGNKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSTPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|224826999|ref|ZP_03700097.1| acyl-CoA dehydrogenase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224600832|gb|EEG07017.1| acyl-CoA dehydrogenase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 395
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 191/365 (52%), Gaps = 1/365 (0%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A P S+ P D + LLT EE+ VR ++ + P + + F ++ +
Sbjct: 2 AAPTSRAPFSWEDPLLLETLLTEEERIVRDTAHAYCQERLMPRILTANREERFDREIMSE 61
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+G L + G TI +GC G S + E+ RVD+ + + V SSL M I G+E
Sbjct: 62 MGELGLLGCTIDTHGCAGLSHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIWAYGTEA 121
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK KYLP LA + C+ LTEP GSD + + T A KV+GG+ L+G K WI NS ADV
Sbjct: 122 QKDKYLPKLATGEWVGCFGLTEPDAGSDPAGMKTRARKVDGGYQLKGSKMWITNSPIADV 181
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
V++A++ +I G++++K GL+ KI K LR G+I++ VFVP+E+ LPGV
Sbjct: 182 FVVWAKD-DDGEIRGFVLEKGMQGLSAPKIHGKFSLRASITGEIVMDDVFVPEENLLPGV 240
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
+ L +R +AW +G + + +Y +RKQFG PLAA Q+ Q KL M
Sbjct: 241 KGLKGPFGCLNKARFGIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQLIQLKLANMQ 300
Query: 335 GNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLV 394
I + ++ +L + G P SL K +A + + R++ GGNGI +F V
Sbjct: 301 TEIALGLAAALQVGRLMDAGRAAPEMISLIKRNNCGKALDIARVARDMHGGNGIADEFHV 360
Query: 395 AKVIM 399
+ +M
Sbjct: 361 IRHVM 365
>gi|92116366|ref|YP_576095.1| acyl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
gi|91799260|gb|ABE61635.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
Length = 404
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 7/367 (1%)
Query: 37 PASKFPPCA-----SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV 91
P SK P D + DD LT +E+ +R R + ++ P + + + + + +
Sbjct: 5 PQSKDQPVPVSFQWDDPFGLDDQLTEDERMIRDTARAYAQDKLLPRIVKAYLEEKTDREI 64
Query: 92 IPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++G L + G T+ + YGC S + EI RVD+ + V SSL M I
Sbjct: 65 FNEMGELGLNGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAY 124
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210
G E Q++KYLP LA + C+ LTEP GSD + T A KV G+ L G K WI N+
Sbjct: 125 GDESQRKKYLPRLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVSDGYRLTGSKTWISNAP 184
Query: 211 FADVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
AD+ V++ R+ NQI G++++K GL+ KI K+ LR G+I++ V VP+E+
Sbjct: 185 IADLFVVWVRSAAHDNQIRGFVLEKGMKGLSAPKIGGKLSLRASCTGEIVMDGVVVPEEN 244
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
LP V+ + L +R ++W +G + +Y+ ERKQFG PLAA Q+ Q+K
Sbjct: 245 LLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCMHRARKYVLERKQFGRPLAATQLVQKK 304
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGIL 389
L M +I + R+ +L ++G M P S+ K +A + + R++ GGNGI
Sbjct: 305 LADMQTDIALGLQGSLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARMARDMHGGNGIQ 364
Query: 390 SDFLVAK 396
++ V +
Sbjct: 365 IEYHVMR 371
>gi|271970235|ref|YP_003344431.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
roseum DSM 43021]
gi|270513410|gb|ACZ91688.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM
43021]
Length = 385
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 179/352 (50%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI-PKLGALRVAGGTI 105
D + DD L+ E++ +R V+ + I P + +++E+A FP + P LG+L V G +
Sbjct: 3 DLLRIDDGLSEEQRLIRDTVKTFVADRILPHVGDWFEEAVFPARELGPVLGSLGVLGMHL 62
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G +A E+ D+ +F+ V SLAM I GS EQK+++LP +A
Sbjct: 63 EGYGCAGLDAVSYGVACRELEAGDSGLRSFVSVQGSLAMFPIWKYGSAEQKEEWLPRMAA 122
Query: 166 LNTIACWALTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + + T A + G WIL G K WI N + ADV V++A+ T
Sbjct: 123 GEAIGCFGLTEPDHGSDPANMRTHAKQDASGDWILNGAKMWITNGSIADVAVVWAQ--TE 180
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++V D PG + +I K+ LR + V +P LPGV + L
Sbjct: 181 DGIRGFVVPTDTPGFSAPEIHKKMSLRASVTSSLYFDDVRLPASAVLPGVRGLKGPLSCL 240
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+ +R + W +G + + Y R QFG P+ FQ+ Q+KL M + L
Sbjct: 241 SEARFGILWGVVGAARACLEAAVGYATTRVQFGKPIGGFQLTQEKLAWMYVGLGQSQLTA 300
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L +L + G +TP S GK A + R +LGGNGI ++ V +
Sbjct: 301 LHLGRLKDAGTLTPQQVSFGKLANVRAALDIARRSRAILGGNGITLEYPVIR 352
>gi|167580782|ref|ZP_02373656.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
gi|167618886|ref|ZP_02387517.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
Length = 395
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 185/341 (54%), Gaps = 3/341 (0%)
Query: 59 EQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTG 117
E+ VR + ++AP + E + + ++G + + G TI + YG PG S
Sbjct: 22 ERMVRDAANAYAQGKLAPRVTEAFRHETTDAAIFREMGEVGLLGPTIPEAYGGPGLSYVS 81
Query: 118 AAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEP 177
+ E+ RVD+ + + V SSL M+ I GS+ QK+KYLP LA I C+ LTEP
Sbjct: 82 YGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEP 141
Query: 178 AYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYLVKKD 235
+GSD ++ T A KV GG+ L G K WI NS ADV V++A+ ++I G++++K
Sbjct: 142 NHGSDPGSMVTRAKKVPGGYALSGSKMWITNSPIADVFVVWAKLDEDGRDEIRGFILEKG 201
Query: 236 APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQP 295
GL+ I K+GLR G+I+L +VFVP+E+ LP V + L +R +AW
Sbjct: 202 WKGLSAPAIHGKVGLRASITGEIVLDEVFVPEENILPNVKGLRGPFTCLNSARYGIAWGA 261
Query: 296 IGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGA 355
+G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL ++ ++G
Sbjct: 262 LGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGT 321
Query: 356 MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
S+ K +A + L R++LGGNGI +F VA+
Sbjct: 322 AAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|291438235|ref|ZP_06577625.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
gi|291341130|gb|EFE68086.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
Length = 397
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 179/352 (50%), Gaps = 4/352 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGT 104
D DDLL+ EE+AVR VR+ + + P +A+++E E P + +LGAL + G
Sbjct: 15 DLAGIDDLLSPEEKAVRSAVRQVCDSAVDPHIAQWFEDGELPAVRELAKELGALGLLGMH 74
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC G S +A E+ D+ + + V SLAM I G+EE KQ++LP +A
Sbjct: 75 LEGYGCAGMSAVDYGLACLELEASDSGIRSLVSVQGSLAMYAIWRHGTEEHKQRWLPRMA 134
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD + + T A + W+L+G K WI N + ADV V++A+ T
Sbjct: 135 AGEAIGCFGLTEPDHGSDPAGMRTRARRDGSDWVLDGTKMWITNGSVADVAVVWAQ--TD 192
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ G++V PG + I++K+ LR +++L V +P E P V + L
Sbjct: 193 EGVRGFVVPTGTPGFSARTIQHKMSLRASVTSELVLDGVRLPAEAVFPEVRGLRGPLSCL 252
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + + Y +R QFG P+ FQ+ Q KL M + L+
Sbjct: 253 NEARYGILWGAMGAARSAFRSALEYAGQRTQFGRPIGGFQLTQAKLADMAVELTNGTLLA 312
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L + + + P SLGK +A E R +LG NGI ++ V +
Sbjct: 313 LHLGRRKDAVGLRPEQVSLGKLNNVNKALEICRTARTILGANGISLEYPVIR 364
>gi|399543370|ref|YP_006556678.1| hypothetical protein MRBBS_0327 [Marinobacter sp. BSs20148]
gi|399158702|gb|AFP29265.1| hypothetical protein MRBBS_0327 [Marinobacter sp. BSs20148]
Length = 392
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 192/357 (53%), Gaps = 8/357 (2%)
Query: 48 YYQFDD------LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
++ +DD LT EE+ +R + ++++ P + + + F ++ ++G L +
Sbjct: 3 HFNWDDPLLLEQQLTDEERQIRDAAHDYCQEKLQPRVLSAFREERFDREIMNEMGELGLL 62
Query: 102 GGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G T+ YG G + + E+ RVD+ + + V SSL M I GSE+QK+K+L
Sbjct: 63 GATVSPEYGGSGVNHVSYGLIAREVERVDSGYRSAMSVQSSLVMYPIEAYGSEDQKKKFL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA + C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS AD+ V++A+
Sbjct: 123 PKLASGEMVGCFGLTEPDHGSDPGSMITRAVKVDGGYSLIGAKIWITNSPIADIAVVWAK 182
Query: 221 NTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
++ NQI G++V++ G + KIE K+ LR G+I+L FVP+E+ LP V+ +
Sbjct: 183 SSAHDNQIKGFIVERGTKGFSTPKIEGKVSLRASITGEIVLDNAFVPEENLLPNVSGLKG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I
Sbjct: 243 PFGCLNKARFGIAWGVMGTAEFCWHAARQYTLDRKQFGRPLAANQLVQKKLADMQTEITL 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++ +L + G P SL K +A + R++ GGNG+ ++ V +
Sbjct: 303 GLQAALQVGRLMDSGNWAPEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIR 359
>gi|441508878|ref|ZP_20990800.1| glutaryl-CoA dehydrogenase [Gordonia aichiensis NBRC 108223]
gi|441446883|dbj|GAC48761.1| glutaryl-CoA dehydrogenase [Gordonia aichiensis NBRC 108223]
Length = 406
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 189/372 (50%), Gaps = 13/372 (3%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIP 93
T +KF A D D + +E AVR VR + + + P +A+++E+ P +
Sbjct: 4 TATTKF--TALDPLNIDLGYSDDELAVRDSVRGFLAEHVTPHIADWFEEGGIPIARDLFK 61
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+ G L V G + GYGC G S +A E+ D+ + + V SLAM +I GSE
Sbjct: 62 QFGQLGVLGMHLDGYGCGGASSVHYGLASLELEACDSGIRSMVSVQGSLAMFSIYNNGSE 121
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQK +LPS+A+ T+ C+ LTEP GSD +++ T A + WIL+G+K WI N+ AD
Sbjct: 122 EQKNHWLPSMAEGTTVGCFGLTEPDAGSDPASMKTRARRDGDDWILDGRKMWITNAPIAD 181
Query: 214 VLVIFARNTTTN---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDR 270
V V++A+ + G++V D PG++ +I++K LR G+I+L V +P +
Sbjct: 182 VAVVWAQTDLPEGGVGVRGFIVPTDTPGVSTPEIKHKASLRASTTGEIVLDNVRLPADAL 241
Query: 271 LPGVNSFQDTSKV------LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
+PG + + L +R + W IG + + Y +R QFG P+A FQ
Sbjct: 242 MPGNDDLHKGRGIKAPLSSLTEARYGIIWGSIGAARTAWQAALDYATQRTQFGKPIAGFQ 301
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q KL M +Q L+ + L +L + + P S GK T A E R +LG
Sbjct: 302 LTQAKLADMAVELQKGQLLAYHLGRLKDSVGLRPVQVSFGKLNNTREAIEICRTARTILG 361
Query: 385 GNGILSDFLVAK 396
GNGI ++ V +
Sbjct: 362 GNGISLEYPVIR 373
>gi|392560782|gb|EIW53964.1| acyl-CoA dehydrogenase domain-containing protein [Trametes
versicolor FP-101664 SS1]
Length = 421
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 192/365 (52%), Gaps = 14/365 (3%)
Query: 45 ASDYYQF--------DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLG 96
AS Y +F + LLT EE A+R R ++ + P + E EF ++P +G
Sbjct: 28 ASGYGKFNWEDPLNAEGLLTDEEVAIRDTARAFCQENLLPRVLEAQRTEEFNHDILPAMG 87
Query: 97 ALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQK 156
L + G TI+GY C G S + E+ RVD+ + + V SSL M I G++ QK
Sbjct: 88 ELGLLGPTIQGYDCAGVSSVAYGLIAREVERVDSGYRSTMSVQSSLVMHPIYAYGTQAQK 147
Query: 157 QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 216
KYLP LA+ I C+ LTEP +GSD + + TTAT+V+GG+++ G K WI N+ ADV +
Sbjct: 148 DKYLPLLAKGKLIGCFGLTEPNHGSDPAGMETTATEVDGGFVINGSKTWISNAPVADVFI 207
Query: 217 IFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
I+AR +++ G++++K A GL+ I++K+ LR G I + V V + LP
Sbjct: 208 IWARCKWDDKVRGFILEKGAKGLSAPAIKHKLALRCSLTGSIFMDNVQVSHDALLPHGQG 267
Query: 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHR---YLKERKQFGAPLAAFQINQQKLVQM 333
L +R +AW +G + D HR Y ER+QF PLA+FQ+ Q+KLV
Sbjct: 268 LGAPFGCLNNARFGIAWGTMG---ALEDCVHRTREYALERQQFKRPLASFQLVQKKLVDA 324
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ +L ++ +L ++G + P SL K +A E ++LGGN ++
Sbjct: 325 QTEVTLGLLACLQVGRLKDEGKVAPEMISLIKRNNCGKALEHARRVLDILGGNACSDEYH 384
Query: 394 VAKVI 398
V + +
Sbjct: 385 VGRHV 389
>gi|421787701|ref|ZP_16224040.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-82]
gi|410406246|gb|EKP58259.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-82]
Length = 406
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 183/347 (52%), Gaps = 5/347 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L+ +E+ +R ++ + P + E + + ++G L + G TI + YG G
Sbjct: 26 LSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIPEQYGGAGL 85
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + EI VD+ + V SSL M+ I G+EEQKQKYLP LA I C+
Sbjct: 86 NYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLATGEYIGCFG 145
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN----QING 229
LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ + I G
Sbjct: 146 LTEPDHGSDPGSMITRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRG 205
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P + + L +R
Sbjct: 206 FILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPFTCLNSARY 265
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+AW +G + + H+Y ERKQFG PLAA Q+ Q+KL M I + R +
Sbjct: 266 GIAWGAMGAAEFCWHTAHQYTMERKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGR 325
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 326 MKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|94311587|ref|YP_584797.1| glutaryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
gi|430805410|ref|ZP_19432525.1| glutaryl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|93355439|gb|ABF09528.1| Glutaryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
gi|429502447|gb|ELA00758.1| glutaryl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 397
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT++E+ VR + ++ P + + + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTADERMVRDAAAAYCQDKLMPRVLQSFRNEKTDVEIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGTEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+ +
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGGYELTGAKMWITNSPIADVFVVWAKLMGD 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV+ +
Sbjct: 190 DGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVFVPEENIMPGVSGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAATQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|89055560|ref|YP_511011.1| acyl-CoA dehydrogenase [Jannaschia sp. CCS1]
gi|88865109|gb|ABD55986.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
Length = 404
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 187/368 (50%), Gaps = 9/368 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L +E+ +R R + + P + E ++K + ++G + + G TI
Sbjct: 20 DPLRLDAQLNEDERMIRDAARAYAQDRLQPRVIEAYDKERTDPAIFTEMGEMGLLGTTIP 79
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G S + EI RVD+ + + V SSL M I GSEEQ+QKYLP LA
Sbjct: 80 ESYGGLGGSYVAYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRQKYLPKLAT 139
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-T 224
I C+ LTEP GSD S + T A K G++L G K WI NS ADV +I+A++
Sbjct: 140 GEWIGCFGLTEPDAGSDPSGMKTVARKTAAGYVLNGAKMWISNSPIADVFIIWAKSEAHG 199
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+I G++++KD PGL+ KI +K+ LR G+I+++ V V +E LP V + L
Sbjct: 200 GKIRGFVLEKDMPGLSAPKIGDKLSLRASVTGEIVMENVAVGEEALLPNVEGLKGPFGCL 259
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R ++W IG + +Y +R QF PLA Q+ Q+KL ML I +
Sbjct: 260 NRARYGISWGVIGAAEFCMAAARQYGLDRTQFDRPLAQTQLYQKKLADMLTEITLGLQAS 319
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLH 404
++ +L + G P SL K +A + L R++ GGNGI S+F V F H
Sbjct: 320 LQVGRLMDDGNAAPEMISLIKRNNCGKALDAARLARDMHGGNGISSEFQV-------FRH 372
Query: 405 LDHFVCKN 412
+ + N
Sbjct: 373 MSNLETVN 380
>gi|421695806|ref|ZP_16135404.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-692]
gi|404564162|gb|EKA69349.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-692]
Length = 403
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLSGTKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|359771428|ref|ZP_09274880.1| glutaryl-CoA dehydrogenase [Gordonia effusa NBRC 100432]
gi|359311488|dbj|GAB17658.1| glutaryl-CoA dehydrogenase [Gordonia effusa NBRC 100432]
Length = 395
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 190/358 (53%), Gaps = 10/358 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIP-KLGALRVAGGT 104
++ + D L+ EEQA+ VR+ +K + P + +++E E P + +LG L + G
Sbjct: 8 AELFALDTLIDGEEQAIIATVRDFGDKRLRPNVGDWFEAGELPVRELALELGKLGLFGMH 67
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGC S T +A E+ VD+ +F+ V SL+M I GSEEQ++++LP +A
Sbjct: 68 LEGYGCANTSATSYGLACLELEAVDSGLRSFVSVQGSLSMYAIRAFGSEEQREEWLPRMA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GS+ + + TTA + W+L G K WI N + ADV V++AR +
Sbjct: 128 AGEAIGCFGLTEPDFGSNPAGMRTTARRDGDDWVLNGAKMWITNGSVADVAVVWARTDLD 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++V D PG + ++I+ K+ LR G+++L+ V +P LPGV +
Sbjct: 188 DGARGIRGFVVPTDTPGFSTSEIKRKMSLRASVTGELVLEDVRLPASAMLPGVEGLRGPL 247
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + +G + + Y +R+ F L+++Q+ Q KL M +
Sbjct: 248 SCLNEARFGIVFGAVGAARDCVETALSYAADREVFDKSLSSYQLTQAKLADMALEVGKAQ 307
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ L ++ + G + P SLGK RE +A+ RE +LG NGI ++ V +
Sbjct: 308 LLALHLGRIKDSGKIRPEQISLGK---LNNVREAIAIARECRTILGANGITLEYPVIR 362
>gi|393763903|ref|ZP_10352516.1| acyl-CoA dehydrogenase-like protein [Alishewanella agri BL06]
gi|392605217|gb|EIW88115.1| acyl-CoA dehydrogenase-like protein [Alishewanella agri BL06]
Length = 391
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 189/354 (53%), Gaps = 3/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D +QF LLT EE+ +R + ++ + P + + F ++ +LG L + G T+
Sbjct: 10 DPFQFSQLLTEEERLIRNTAHQYCQERLQPRVLMANREEHFHREIMNELGELGLLGATLP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC + + E+ RVD+ + + V SSL M I G+E Q+ KYLP LA
Sbjct: 70 EKYGCSAVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHEYGTEAQRLKYLPRLAT 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ TTA +++GG++L G K WI NS ADV V++A+
Sbjct: 130 GEWVGCFGLTEPDAGSDPASMRTTAKRIDGGYLLNGSKMWITNSPIADVFVVWAK--LDG 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KI+ K LR G+I++ V VP++ LP V+ + L
Sbjct: 188 EIRGFVLEKGMTGLSAPKIDGKFSLRASITGEIVMDNVAVPEDALLPNVSGLKGPFGCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +R QFG PLA Q+ Q+KL M I +L
Sbjct: 248 KARYGIAWGALGAAEFCWHAARQYTLDRIQFGRPLAQTQLVQKKLADMQTEISIGLLACL 307
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L + G + P SL K +A E + R++ GGNGI ++ V + +M
Sbjct: 308 QAGRLMDAGLLPPETISLIKRNSCGKALEIARIARDMHGGNGIADEYHVIRHVM 361
>gi|239501349|ref|ZP_04660659.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB900]
Length = 403
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|421650788|ref|ZP_16091161.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC0162]
gi|425747459|ref|ZP_18865462.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-348]
gi|445457641|ref|ZP_21446629.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC047]
gi|408509553|gb|EKK11224.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC0162]
gi|425493377|gb|EKU59609.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-348]
gi|444776258|gb|ELX00304.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC047]
Length = 403
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + LT +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLTEDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|417553602|ref|ZP_12204671.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-81]
gi|417560571|ref|ZP_12211450.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC137]
gi|421201555|ref|ZP_15658714.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC109]
gi|421454230|ref|ZP_15903579.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-123]
gi|421632307|ref|ZP_16072965.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-13]
gi|421804607|ref|ZP_16240513.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-A-694]
gi|395523153|gb|EJG11242.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC137]
gi|395563587|gb|EJG25240.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC109]
gi|400212997|gb|EJO43954.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-123]
gi|400390019|gb|EJP57066.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-81]
gi|408709619|gb|EKL54861.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-13]
gi|410410956|gb|EKP62840.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-A-694]
Length = 403
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDTAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|420137029|ref|ZP_14645031.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa CIG1]
gi|403250205|gb|EJY63659.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa CIG1]
Length = 393
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAQDKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E +QKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + +Y+ +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCCHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 360
>gi|26986902|ref|NP_742327.1| acyl-CoA dehydrogenase [Pseudomonas putida KT2440]
gi|24981507|gb|AAN65791.1|AE016205_4 glutaryl-CoA dehydrogenase [Pseudomonas putida KT2440]
Length = 393
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|169797090|ref|YP_001714883.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
gi|213156503|ref|YP_002318164.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
gi|215484553|ref|YP_002326788.1| glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
AB307-0294]
gi|260555617|ref|ZP_05827837.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301594728|ref|ZP_07239736.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB059]
gi|332856328|ref|ZP_08436195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
gi|332867824|ref|ZP_08437862.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
gi|421659026|ref|ZP_16099252.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-83]
gi|169150017|emb|CAM87911.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
gi|213055663|gb|ACJ40565.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
gi|213988121|gb|ACJ58420.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
AB307-0294]
gi|260410528|gb|EEX03826.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|332727099|gb|EGJ58570.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
gi|332733724|gb|EGJ64879.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
gi|408708965|gb|EKL54227.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-83]
gi|452948322|gb|EME53801.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii MSP4-16]
Length = 406
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|440696054|ref|ZP_20878556.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
turgidiscabies Car8]
gi|440281768|gb|ELP69316.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptomyces
turgidiscabies Car8]
Length = 386
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 177/337 (52%), Gaps = 8/337 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHS 114
LT EE+ ++ V + + + P + E++E A F + P+LG L V G ++GYGC G +
Sbjct: 14 LTDEEREIQATVAKFLADRVRPHIGEWFENAHFARELAPELGKLGVLGMHLEGYGCAGTN 73
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
+A E+ D+ +F+ V SL+M +I GSEEQKQ++LP LA I C+ L
Sbjct: 74 AVSYGLACLELEAADSGFRSFVSVQGSLSMFSIWKWGSEEQKQEWLPRLAAGEAIGCFGL 133
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKK 234
TEP +GS+ S + T A + W+L+G K WI N + ADV ++A+ T + I G+LV +
Sbjct: 134 TEPDFGSNPSGMRTRAVRDGDDWVLDGSKMWITNGSIADVATVWAQ--TEDGIRGFLVPR 191
Query: 235 DAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQ 294
PG T I+ K+ LR ++ V +PD RLP + L +R + +
Sbjct: 192 GTPGFTTQDIKQKMSLRASVTSELSFDDVRLPDSARLPLAEGLRGPLSCLNEARFGILFG 251
Query: 295 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354
+G + Y R QFG P++AFQ+ Q+KL M ++ L+ L +L ++
Sbjct: 252 AVGAARDSIQAAVEYADSRIQFGKPISAFQLTQKKLADMSVSVGNAALLAVHLGRLKDQH 311
Query: 355 AMTPGHASLGKSWITARARETVALGRE---LLGGNGI 388
+ P S+GK RE +A+ RE +LG NGI
Sbjct: 312 RLRPEQISVGK---LNNVREAIAIARECRTVLGANGI 345
>gi|424875018|ref|ZP_18298680.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393170719|gb|EJC70766.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 395
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 189/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++ + LTSEE+ V+ ++++AP + + + + + ++G L + G TI
Sbjct: 11 ADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVLDAFRNEKTDPEIFREMGELGLLGPTI 70
Query: 106 K-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
YG G + E+ +VD+ + + V SSL M+ I GS+ QK KYLP LA
Sbjct: 71 SPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIETFGSQAQKLKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI ++ ADV V++A+ T
Sbjct: 131 TGEWIGCFGLTEPDHGSDPGSMATRAKKVDGGYSLTGSKTWISSAPIADVFVVWAK-TED 189
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++++K GL+ I K+GLR G++++ VFVP+E+ LP V + L
Sbjct: 190 GLIRGFILEKGWKGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVTGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y +Y ERKQFG PLAA Q+ Q+KL M I +
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ E+G S+ K +A E R++LGGNGI +F +A+
Sbjct: 310 LRLGRMKEEGHPPVELTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361
>gi|297198653|ref|ZP_06916050.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
ATCC 29083]
gi|197714601|gb|EDY58635.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
ATCC 29083]
Length = 390
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 181/359 (50%), Gaps = 5/359 (1%)
Query: 41 FPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGA 97
PP +D DDLL E+ A+R VR + P +A+++EK E P + +LG
Sbjct: 1 MPPFDPADPLGIDDLLEPEDLAIRATVRTWAADRVLPHVADWYEKGELPGIRELARELGE 60
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ G ++ GYGC G S +A E+ D+ + + V SLAM I GSEEQKQ
Sbjct: 61 IGALGMSLSGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQ 120
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
+LP +A I C+ LTEP +GSD A+ T A K W+L G+K WI N + A V V+
Sbjct: 121 TWLPRMAAGEVIGCFGLTEPDHGSDPGAMRTFAKKDGTDWVLNGRKMWITNGSVAGVAVV 180
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A+ T + I G++V D G + +I++K LR +++L V +P + LP V
Sbjct: 181 WAQ--TDDGIRGFVVPTDTAGFSAPEIKHKWSLRASVTSELVLDDVRLPADAVLPEVVGL 238
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M +
Sbjct: 239 KGPLSCLSHARYGIVWGAMGAARSCFETAVDYAKTREQFGRPIGGFQLTQAKLADMAVEL 298
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
IL+ L + + G + P S GK A E R +LG NGI ++ V +
Sbjct: 299 HKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTILGANGISLEYPVMR 357
>gi|359768696|ref|ZP_09272469.1| glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
gi|359314134|dbj|GAB25302.1| glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
Length = 394
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 185/358 (51%), Gaps = 10/358 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGT 104
+ + D LL ++E A+R VR+ ++ + P + +++EK P + K LGAL G
Sbjct: 7 TQLFALDSLLDADEIAIRDTVRKFGQERLRPHIGDWFEKGALPARELAKELGALGALGMH 66
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQKQ++LP A
Sbjct: 67 LEGYGCPGTSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKQEWLPRTA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GS+ + + T A + W+L G K WI N + ADV V++A+
Sbjct: 127 AGEAIGCFGLTEPDFGSNPAGMRTNAKRDGDDWVLNGTKMWITNGSIADVAVVWAQTDLE 186
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
+ I G++V D PG + +I K+ LR +++L V +P LP +
Sbjct: 187 ESPRGIRGFVVPTDTPGFSAPEITKKMSLRASVTSELVLDDVRLPASAMLPEAAGLRGPL 246
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + IG + + Y + R F PLAA+QI Q K+ M +
Sbjct: 247 TSLGEARFGIIFGAIGAARDCLETAVEYSQSRAVFDKPLAAYQITQTKIADMALEVGKGH 306
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G + P S GK RE +A+ RE +LG NGI ++ V +
Sbjct: 307 LLAYHLGRLKDRGELRPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPVIR 361
>gi|148545434|ref|YP_001265536.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida F1]
gi|395446492|ref|YP_006386745.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida ND6]
gi|397693348|ref|YP_006531228.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|421523017|ref|ZP_15969650.1| glutaryl-CoA dehydrogenase [Pseudomonas putida LS46]
gi|431800184|ref|YP_007227087.1| glutaryl-CoA dehydrogenase [Pseudomonas putida HB3267]
gi|148509492|gb|ABQ76352.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
gi|388560489|gb|AFK69630.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida ND6]
gi|397330078|gb|AFO46437.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|402753122|gb|EJX13623.1| glutaryl-CoA dehydrogenase [Pseudomonas putida LS46]
gi|430790949|gb|AGA71144.1| glutaryl-CoA dehydrogenase [Pseudomonas putida HB3267]
Length = 393
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|170739921|ref|YP_001768576.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
sp. 4-46]
gi|168194195|gb|ACA16142.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
Length = 415
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 192/372 (51%), Gaps = 4/372 (1%)
Query: 27 DISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
D+S A P F D + +D LT EE+ +R R ++ + P + E + +
Sbjct: 13 DLSAAKPHEGSKGAFR--WDDPFLLEDQLTDEERLIRDTARGFAQERLLPGIVEAYAEER 70
Query: 87 FPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAML 145
+ +G L + G T+ + YGC G S + E+ R+D+ + + V SSL M
Sbjct: 71 TDRSLFNAMGELGLLGVTLPEEYGCAGASYVAYGLVAREVERIDSGYRSMMSVQSSLVMY 130
Query: 146 TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205
I G E Q++ YLP LA + C+ LTEP GSD + + T A K++GG+ L G K W
Sbjct: 131 PIYAYGDEAQRRTYLPKLATGEFVGCFGLTEPDAGSDPAGMRTRAEKIDGGYRLSGAKTW 190
Query: 206 IGNSTFADVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
I N+ ADV V++A++ NQI G++++K GL+ KI+ K+ LR G+I++ V
Sbjct: 191 ISNAPIADVFVVWAKSPAHDNQIRGFVLEKGMKGLSAPKIKGKLSLRASVTGEIVMDGVE 250
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
VP+ LP V+ + L +R ++W +G + + +Y +R QFG PLA Q
Sbjct: 251 VPESALLPHVSGLKGPFGCLNRARYGISWGALGAAEDCWHRARQYTLDRTQFGRPLAQTQ 310
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q+KL M I + R+ +L+++G + P S+ K +A E R++ G
Sbjct: 311 LVQRKLADMQTEIALGLQASLRVGRLFDEGRVAPEMISIVKRNNCGKALEIARTARDMHG 370
Query: 385 GNGILSDFLVAK 396
GNGI+ ++ V +
Sbjct: 371 GNGIMGEYHVMR 382
>gi|104779425|ref|YP_605923.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
gi|95108412|emb|CAK13106.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
Length = 393
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|378948096|ref|YP_005205584.1| protein GcdH [Pseudomonas fluorescens F113]
gi|359758110|gb|AEV60189.1| GcdH [Pseudomonas fluorescens F113]
Length = 393
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIAR 360
>gi|148253939|ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146406112|gb|ABQ34618.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 404
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 191/369 (51%), Gaps = 7/369 (1%)
Query: 35 ATPASKFPPCAS-----DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF 89
A P +K P S D + DD LT +E+ VR R + ++ P + + + + +
Sbjct: 3 ARPQAKDKPAQSSFQWDDPFLLDDQLTEDERMVRDTARAYAQDKLLPRVTKAYLEEKTDR 62
Query: 90 HVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIA 148
+ ++G L + G T+ + YGC S + EI RVD+ + V SSL M I
Sbjct: 63 EIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIY 122
Query: 149 LCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208
G E Q++KYLP LA + C+ LTEP GSD + + T A KV G+ L G K WI N
Sbjct: 123 AYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPAGMKTRAEKVADGYRLTGSKMWISN 182
Query: 209 STFADVLVIFARNTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPD 267
+ ADV V++A++ NQI G++++K GL+ KI K+ LR G++++ V VP+
Sbjct: 183 APIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEVVMDGVVVPE 242
Query: 268 EDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
E LP V+ + L +R ++W +G + +Y +RKQFG PLAA Q+ Q
Sbjct: 243 EALLPNVSGLKGPFGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGKPLAATQLVQ 302
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
+KL M I + R+ +L ++G M P S+ K +A + + R++ GGNG
Sbjct: 303 KKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARVARDMHGGNG 362
Query: 388 ILSDFLVAK 396
I ++ V +
Sbjct: 363 IQIEYQVMR 371
>gi|409399084|ref|ZP_11249456.1| glutaryl-CoA dehydrogenase [Acidocella sp. MX-AZ02]
gi|409131728|gb|EKN01417.1| glutaryl-CoA dehydrogenase [Acidocella sp. MX-AZ02]
Length = 392
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 184/351 (52%), Gaps = 2/351 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + + L+ EE+A+R ++++ P + + + F ++ +LG L + G T+
Sbjct: 12 ADPLRLEAELSEEERAIRDTAHAYAQEKLQPRVLMAFREERFDREIMNELGELGLLGATL 71
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ C S + EI RVD+ + V SSL M I GS+ QK KYLP L
Sbjct: 72 SSHDCADVSYVAYGLIAREIERVDSGYRSAYSVQSSLVMYPIYAFGSDAQKNKYLPKLRT 131
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD +++ TTA KV+GG++L G K WI NS ADV V++A++ +
Sbjct: 132 GEWVGCFGLTEPDAGSDPASMRTTAKKVDGGYLLSGSKTWISNSPIADVCVVWAKDEAGD 191
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++V++ A GL+ KIE K+ LR G I+L +VFVPDE L V + L
Sbjct: 192 -IRGFIVERGAKGLSTPKIEGKVSLRASITGMIMLDEVFVPDEAML-NVKGLRGPFSCLN 249
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + Y RK FG PLAA Q+ Q+KL M I +
Sbjct: 250 NARYGIAWGALGAAEFCWHQARDYTLNRKMFGRPLAATQLIQKKLADMQTEITIGLHAVL 309
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL +L + G P SL K +A + R++LGGNGI ++ V +
Sbjct: 310 RLGRLMDAGEAAPEMISLLKRNNCGKALDVARQARDMLGGNGIADEYHVIR 360
>gi|344244507|gb|EGW00611.1| Glutaryl-CoA dehydrogenase, mitochondrial [Cricetulus griseus]
Length = 430
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 190/375 (50%), Gaps = 8/375 (2%)
Query: 32 FPQAT---PASKFPPCAS--DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
FPQ T PA P D ++ LT++E+ +R R ++++ P +
Sbjct: 24 FPQKTQSRPAQTSRPGFDWRDPLVLEEQLTADEKLIRDTFRNYCQEQLMPRIVLANRNEV 83
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
F ++ ++G L + G TIKGYGC G S + E+ RVD+ + + V SSL M
Sbjct: 84 FHRDIVYEMGELGMLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHP 143
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKR 204
I GSEEQ+QKYLP LA+ + C+ LTEP +GSD + T A +IL G K
Sbjct: 144 IYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYILNGTKT 203
Query: 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
WI NS AD+ V++AR N I G+L++K GL+ +IE K LR G I++ V
Sbjct: 204 WITNSPVADLFVVWAR-CEDNCIRGFLLEKGMRGLSAPRIEGKFSLRASSTGMIIMDNVE 262
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
VP+E+ LP +S L +R + W +G + +Y +R QFG PLA Q
Sbjct: 263 VPEENVLPNASSLAGPFGCLNAARYGITWGVLGAAEFCLHTARQYALDRIQFGVPLARNQ 322
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q+KL ML I + +L +L ++ TP SL K +A + R++LG
Sbjct: 323 LIQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSLLKRNNCGKALDIARQARDILG 382
Query: 385 GNGILSDFLVAKVIM 399
GNGI ++ V + M
Sbjct: 383 GNGISDEYHVIRHAM 397
>gi|424861558|ref|ZP_18285504.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodococcus opacus PD630]
gi|356660030|gb|EHI40394.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodococcus opacus PD630]
Length = 390
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 189/359 (52%), Gaps = 9/359 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL +EE A+R VR +++I P + +++E A P + + LG L V
Sbjct: 4 PQSLTQLFALDSLLDTEEIAIRDTVRRFADEKIRPHIGDWFEAAALPVRELAEGLGELGV 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGC G S T +A E+ VD+ + + V SLAM I GSE+QKQ++L
Sbjct: 64 LGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIHHYGSEDQKQEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ + + T A + WIL G K WI N + ADV V++AR
Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTGAKRDGDDWILNGTKMWITNGSVADVAVVWAR 183
Query: 221 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDT 280
T + I G++V D PG + +I++K+ LR +++L+ V +P+ LP
Sbjct: 184 --TDDGIRGFVVPTDTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKGLSGP 241
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
L +R + + +G + + Y ++R+ F LAA+QI Q K+ M +
Sbjct: 242 LGCLNEARFGIIFGAMGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIADMALEVGKG 301
Query: 341 ILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L +L ++G P S GK RE +A+ RE +LG NGI ++ V +
Sbjct: 302 HLLAYHLGRLKDRGVARPEQVSTGK---LNNVREAIAIARECRTILGANGITLEYPVIR 357
>gi|398976273|ref|ZP_10686179.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM25]
gi|398139109|gb|EJM28110.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM25]
Length = 393
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|349574255|ref|ZP_08886212.1| glutaryl-CoA dehydrogenase [Neisseria shayeganii 871]
gi|348014203|gb|EGY53090.1| glutaryl-CoA dehydrogenase [Neisseria shayeganii 871]
Length = 393
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 191/362 (52%), Gaps = 3/362 (0%)
Query: 39 SKFPPCASDYYQFDDLLTSEEQAVRMKVRE-CMEKEIAPIMAEYWEKAEFPFHVIPKLGA 97
++ P D LT EE+ V C E+ ++ I+ E+ F +++ ++G
Sbjct: 4 TRAPFTWEDPLLLSSQLTEEERMVAESAEAFCQEQLMSGILMANREE-NFDRNIMRQMGE 62
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G TI GYGC G S + + RVD+ + + V SSL M I G++EQK+
Sbjct: 63 LGLLGVTIDGYGCAGMSSVAYGLIARAVERVDSGYRSAMSVQSSLVMHPIWAYGTDEQKE 122
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
K+LP LA I C+ LTEP GSD +++ T A KV+GG+ L G K WI NS ADV V+
Sbjct: 123 KFLPKLATGELIGCFGLTEPNAGSDPASMQTRAKKVDGGYSLSGSKMWITNSPIADVFVV 182
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A++ +I G++++K GL+ KIE K LR G+I++ +VFVP+E+ P +
Sbjct: 183 WAKD-DAGEIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDEVFVPEENAFPEIRGL 241
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +RKQF PLAA QI Q KL M I
Sbjct: 242 KGPFGCLNKARYGIAWGAMGAAEFCWQAARQYTLDRKQFNRPLAATQIVQLKLANMQTEI 301
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKV 397
+ ++ +L ++ P SL K +A + + R++ GGNGI ++ V +
Sbjct: 302 ALGLQAALQVGRLMDEDKAAPEMISLIKRNNCGKALDIARVARDMHGGNGIADEYHVIRH 361
Query: 398 IM 399
+M
Sbjct: 362 VM 363
>gi|359764947|ref|ZP_09268786.1| glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
gi|359317454|dbj|GAB21619.1| glutaryl-CoA dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
Length = 402
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 12/369 (3%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIP 93
T KF A D D + +E AVR VR + + + P +A+++E P +
Sbjct: 5 TSTPKF--SAIDPLNLDLGYSDDELAVRDSVRGFLAEHVTPHIADWFEAGSIPIARDLFK 62
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+ G L V G + GYGC G S +A E+ D+ + + V SLAM +I GS+
Sbjct: 63 QFGQLGVLGMHLDGYGCGGASSVHYGLASLELEACDSGIRSMVSVQGSLAMFSIYNNGSK 122
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQK ++LPS+A+ T+ C+ LTEP GSD +++ T A + WIL+G+K WI NS AD
Sbjct: 123 EQKTRWLPSMAEGTTVGCFGLTEPDAGSDPASMKTRARRDGDDWILDGRKMWITNSPIAD 182
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++AR T + G++V D G++ +I++K+ LR G+I+L V +P E +PG
Sbjct: 183 VAVVWAR--TEEGVRGFIVPTDTAGVSTPEIKHKLSLRASTTGEIVLDNVRLPAEALMPG 240
Query: 274 VNSFQDTSKV------LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQ 327
+ + L +R + W IG + + Y +R QFG P+A FQ+ Q
Sbjct: 241 DDDLHKGQGIKAPLSSLTEARYGIIWGSIGAARTAWQAAVDYATQRTQFGKPIAGFQLTQ 300
Query: 328 QKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNG 387
K+ M +Q L+ L +L + + P S GK T A + R +LGGNG
Sbjct: 301 AKIADMALELQKGQLLAQHLGRLKDSVGLRPDQVSFGKLNNTREAIKICRTARTILGGNG 360
Query: 388 ILSDFLVAK 396
I ++ + +
Sbjct: 361 ISLEYPIIR 369
>gi|386009824|ref|YP_005928101.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida BIRD-1]
gi|313496530|gb|ADR57896.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida BIRD-1]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGAMGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
>gi|296269719|ref|YP_003652351.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
bispora DSM 43833]
gi|296092506|gb|ADG88458.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
43833]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 182/363 (50%), Gaps = 6/363 (1%)
Query: 36 TPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIP 93
T + F P +D D LL+ EE AVR VR+ + P +A ++E+ P +
Sbjct: 2 TTTATFNP--ADPLDIDALLSEEEIAVRDTVRKFCADRVEPHIATWFEEGSLPAARELAR 59
Query: 94 KLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSE 153
+LG + V G ++GYGC G S +A E+ D+ + + V SLAM I GSE
Sbjct: 60 ELGRIGVLGMHLEGYGCAGMSAVSYGLACLELEACDSGLRSLVSVQGSLAMYAIWAYGSE 119
Query: 154 EQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFAD 213
EQK +LP +A I C+ LTEP +GSD ++ TTA + WIL G+K WI N + AD
Sbjct: 120 EQKNHWLPRMAAGEAIGCFGLTEPDHGSDPGSMITTARRDGSDWILNGRKMWITNGSIAD 179
Query: 214 VLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
V V++AR T I G+LV PG + +I++K+ LR +++L V +P + LP
Sbjct: 180 VAVVWAR--TEEGIRGFLVPAGTPGFSAPEIKHKLSLRASVTSELVLDDVRLPADAILPK 237
Query: 274 VNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+ L+ +R + W +G + ++ Y K R QFG P+A FQ+ Q KL M
Sbjct: 238 AEGLRAPLSCLSEARYGIVWGAMGAARSAFEAALEYSKTRTQFGRPIAGFQLTQAKLADM 297
Query: 334 LGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393
+ +L+ L + + + P S GK A + R +LG NGI ++
Sbjct: 298 ALELHKGLLLALHLGRRKDAHGLHPAQVSFGKLNNVREALQICRTARTILGANGISLEYP 357
Query: 394 VAK 396
V +
Sbjct: 358 VIR 360
>gi|15607541|ref|NP_214914.1| Acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis H37Rv]
gi|31791576|ref|NP_854069.1| acyl-CoA dehydrogenase [Mycobacterium bovis AF2122/97]
gi|121636312|ref|YP_976535.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660165|ref|YP_001281688.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis H37Ra]
gi|148821596|ref|YP_001286350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
gi|167970786|ref|ZP_02553063.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis H37Ra]
gi|224988784|ref|YP_002643471.1| acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172]
gi|254363362|ref|ZP_04979408.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
Haarlem]
gi|254549342|ref|ZP_05139789.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289441779|ref|ZP_06431523.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
gi|289568314|ref|ZP_06448541.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
gi|289572985|ref|ZP_06453212.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
gi|289744096|ref|ZP_06503474.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
gi|289748887|ref|ZP_06508265.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
gi|289752429|ref|ZP_06511807.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
gi|289756468|ref|ZP_06515846.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
gi|289760514|ref|ZP_06519892.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
gi|294995156|ref|ZP_06800847.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis 210]
gi|298523874|ref|ZP_07011283.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
gi|306774494|ref|ZP_07412831.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
gi|306779240|ref|ZP_07417577.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
gi|306783028|ref|ZP_07421350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
gi|306787396|ref|ZP_07425718.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
gi|306791949|ref|ZP_07430251.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
gi|306796136|ref|ZP_07434438.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
gi|306801993|ref|ZP_07438661.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
gi|306806207|ref|ZP_07442875.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
gi|306966403|ref|ZP_07479064.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
gi|306970598|ref|ZP_07483259.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
gi|307078324|ref|ZP_07487494.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
gi|307082882|ref|ZP_07491995.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
gi|339630469|ref|YP_004722111.1| acyl-CoA dehydrogenase [Mycobacterium africanum GM041182]
gi|378770146|ref|YP_005169879.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str.
Mexico]
gi|386003451|ref|YP_005921730.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis RGTB423]
gi|392385117|ref|YP_005306746.1| fadE7 [Mycobacterium tuberculosis UT205]
gi|397672191|ref|YP_006513726.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|422811323|ref|ZP_16859726.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CDC1551A]
gi|424802950|ref|ZP_18228381.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis W-148]
gi|31617162|emb|CAD93269.1| PROBABLE ACYL-COA DEHYDROGENASE FADE7 [Mycobacterium bovis
AF2122/97]
gi|121491959|emb|CAL70422.1| Probable acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134148876|gb|EBA40921.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
Haarlem]
gi|148504317|gb|ABQ72126.1| putative glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis
H37Ra]
gi|148720123|gb|ABR04748.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
gi|224771897|dbj|BAH24703.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|289414698|gb|EFD11938.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
gi|289537416|gb|EFD41994.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
gi|289542067|gb|EFD45716.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
gi|289684624|gb|EFD52112.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
gi|289689474|gb|EFD56903.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
gi|289693016|gb|EFD60445.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
gi|289708020|gb|EFD72036.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
gi|289712032|gb|EFD76044.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
gi|298493668|gb|EFI28962.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
gi|308216846|gb|EFO76245.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
gi|308327793|gb|EFP16644.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
gi|308332147|gb|EFP20998.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
gi|308335930|gb|EFP24781.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
gi|308339535|gb|EFP28386.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
gi|308343412|gb|EFP32263.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
gi|308347221|gb|EFP36072.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
gi|308351249|gb|EFP40100.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
gi|308355803|gb|EFP44654.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
gi|308359722|gb|EFP48573.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
gi|308363664|gb|EFP52515.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
gi|308367315|gb|EFP56166.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
gi|323721207|gb|EGB30268.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CDC1551A]
gi|326902226|gb|EGE49159.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis W-148]
gi|339329825|emb|CCC25474.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium africanum GM041182]
gi|341600328|emb|CCC62998.1| probable acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356592467|gb|AET17696.1| Putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str.
Mexico]
gi|378543668|emb|CCE35939.1| fadE7 [Mycobacterium tuberculosis UT205]
gi|380723939|gb|AFE11734.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis RGTB423]
gi|395137096|gb|AFN48255.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|440579851|emb|CCG10254.1| ACYL-CoA DEHYDROGENASE FADE7 [Mycobacterium tuberculosis 7199-99]
gi|444893877|emb|CCP43131.1| Acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis H37Rv]
Length = 395
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 42 PPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGA 97
PP D D L+S+E AVR VR + + P +A ++E + P + + G
Sbjct: 6 PPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVTPHVAAWFEDGDLPVARDLAKQFGE 65
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G + G+GC G S +A E+ D+ + + V SLAM IA GS+EQK+
Sbjct: 66 LGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIASFGSDEQKR 125
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + + C+ LTEP GSD +A+ T A + W++ G K WI N + ADV ++
Sbjct: 126 QWLPGMATGDLLGCFGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIV 185
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V D PG T I +K+ LR +++L V +P + LPG
Sbjct: 186 WA--ATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y ++R QFG P+A FQ+ Q KLV M +
Sbjct: 244 RAPLACLSEARYGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVEL 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L ++ + P S GK T A + R +LGGNGI ++ V +
Sbjct: 304 HKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALKICRTARTILGGNGISLEYPVIR 362
>gi|378549675|ref|ZP_09824891.1| hypothetical protein CCH26_06300 [Citricoccus sp. CH26A]
Length = 442
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 189/350 (54%), Gaps = 8/350 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D L + +E+ + ++VR +++ I P +A+++E A FP ++P+LG L V G +
Sbjct: 48 DLTGMDGLFSDQEKDLALEVRSLVDEVIRPNIADWYEAAVFPREIVPELGKLGVLGMHLD 107
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ D+ TF+ V SLAM I GSE+QK ++LP++A
Sbjct: 108 GYGCAGRSAVQYGLAAQELEAGDSGLRTFVSVQGSLAMSAIHKHGSEDQKNQWLPAMAAG 167
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD +++ TTA + GG W+L G KRWIG +T ADV +I+A+
Sbjct: 168 EAIGCFGLTEPGAGSDPASMRTTARQEPGGDWVLTGTKRWIGLATLADVAIIWAQTGEHG 227
Query: 226 Q---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS--FQDT 280
+ G++V + PG + I +K+ +R +I L V +P E LP ++ +
Sbjct: 228 DGRGVRGFVVPTNTPGFSAEAIGSKLSMRASVQCEIHLDGVRLPAEAILPAESAVGLKGP 287
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+ L +R + W +G + ++ Y R+QFGAPLA++Q+ Q KL M I
Sbjct: 288 FQCLNEARYGIIWGVMGAARDSFNAVLDYTLGREQFGAPLASYQLTQAKLADMAVAINKG 347
Query: 341 ILVGWRLCKLYEKG--AMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L+ ++ ++ + A+TP S GK A RE+LGGNGI
Sbjct: 348 YLLAHQIGRVKDTDPKALTPAMISTGKLDNCRVAIGIAREAREMLGGNGI 397
>gi|398868462|ref|ZP_10623861.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM78]
gi|398233432|gb|EJN19366.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM78]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|293609182|ref|ZP_06691485.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829755|gb|EFF88117.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 402
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 187/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 14 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 73
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 74 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 133
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 134 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 193
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 194 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENVFPEIRGLKGPF 253
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 254 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 313
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
V R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 314 QVALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 368
>gi|440731045|ref|ZP_20911092.1| glutaryl-CoA dehydrogenase [Xanthomonas translucens DAR61454]
gi|440375446|gb|ELQ12155.1| glutaryl-CoA dehydrogenase [Xanthomonas translucens DAR61454]
Length = 387
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 6/352 (1%)
Query: 43 PCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAG 102
PC D + LL+ EE+A++ V ++ ++ PI+ + +++A FP ++P+L L + G
Sbjct: 4 PC-DDLFDVASLLSEEERAIQHAVARFVDAKVLPIIGDAFDQARFPAELVPELAQLGLLG 62
Query: 103 GTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLP 161
T+ G G + + E+ R D+ +F+ V SSL M I GS+ Q+Q++LP
Sbjct: 63 ATLPPAVGGAGLNAVCYGLICQELERGDSGLRSFVSVQSSLCMYPIHAYGSQAQRQRWLP 122
Query: 162 SLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 221
++A + I C+ LTE GSD +A+ T A + GW L G K WI N + ADV +++A+
Sbjct: 123 AMAAGSAIGCFGLTEAQGGSDPAAMQTRAVRDGDGWRLSGSKMWITNGSLADVAIVWAQ- 181
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
T + + G+LV+ PG T I NK+ LR + L V +PD RLPGV +
Sbjct: 182 -TEDGVQGFLVEAGTPGFTTQDISNKMSLRASVTSALFLDAVRLPDSQRLPGVRGLKGPL 240
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W IG ++ Y ER FG PLAA Q Q KL M I
Sbjct: 241 GCLTQARYGISWGAIGAAIACLREALAYAGERILFGRPLAATQSAQIKLADMARRIAGAQ 300
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALG-RELLGGNGILSDF 392
L+ +L +L + G + P SL K W R +A R+LLG GI +++
Sbjct: 301 LLALQLGRLKDAGTLQPAQVSLAK-WNNVRMALDIARDCRDLLGAAGITTEY 351
>gi|378549527|ref|ZP_09824743.1| hypothetical protein CCH26_05550 [Citricoccus sp. CH26A]
Length = 421
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 8/350 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D D L + +E+ + ++VR +++ I P +A+++E A FP ++P+LG L V G ++
Sbjct: 27 DLTGMDGLFSDQEKQLALEVRSLVDEVIRPNIADWYEAAVFPREIVPELGKLGVLGMHLE 86
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S +A E+ D+ TF+ V SLAM I GSE+QK ++LP++A+
Sbjct: 87 GYGCAGRSAVQYGLAAQELEAGDSGLRTFVSVQGSLAMSAIHKHGSEDQKTQWLPAMAKG 146
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP GSD +++ TTA + GG W+L G KRWIG +T ADV +I+A+
Sbjct: 147 EAIGCFGLTEPGAGSDPASMRTTARQEPGGDWVLTGTKRWIGLATLADVAIIWAQTGEHG 206
Query: 226 Q---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS--FQDT 280
+ G++V + PG + I +K+ +R +I L V +P E LP ++ +
Sbjct: 207 DGRGVRGFVVPTNTPGFSAEAIGSKLSMRASVQCEIHLDGVRLPAEAILPAESAVGLKGP 266
Query: 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340
+ L +R + W +G + ++ Y R+QFGAPLA++Q+ Q KL M I
Sbjct: 267 FQCLNEARYGIIWGVMGAARDSFNAVLDYTLGREQFGAPLASYQLTQAKLADMAVAINKG 326
Query: 341 ILVGWRL--CKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
L+ ++ K + A+TP S GK A RE+LGGNGI
Sbjct: 327 YLLAHQIGRTKDTDPKALTPAMISTGKLDNCRVAIGIARDAREMLGGNGI 376
>gi|326384997|ref|ZP_08206670.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
gi|326196288|gb|EGD53489.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
Length = 395
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 181/355 (50%), Gaps = 10/355 (2%)
Query: 49 YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTIKG 107
+ DDLL+ EE+A+R VR+ E I P +A ++++A P + K LG L V G + G
Sbjct: 11 FALDDLLSDEEKAIRDTVRKFGEDRIRPHIAGWFDEARIPAKELAKELGGLGVLGMHLDG 70
Query: 108 YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLN 167
YGC G S +A E+ +D+ + + V SLAM I GSEEQKQ++LP +A +
Sbjct: 71 YGCAGMSAVTYGLACLELEAIDSGIRSLVSVQGSLAMFAIHHWGSEEQKQEWLPRMAAGD 130
Query: 168 TIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT---TT 224
+ C+ LTEP +GSD + T A + W+L G K WI N + ADV V++A+
Sbjct: 131 ALGCFGLTEPDFGSDPGGMRTRAVRDGSDWVLNGAKMWITNGSVADVAVVWAKTDLEQGA 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G++V D PG + +I K+ LR +++L+ V +P+ LP L
Sbjct: 191 RGIRGFVVPTDTPGFSAPEIRAKMSLRASVTSELVLQDVRLPESAMLPKAAGLSGPLSCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + + IG + + Y R F PLAA+Q+ Q KL M + L+
Sbjct: 251 NEARFGIIFGSIGAARDCLETAVDYASTRMVFDKPLAAYQLTQAKLADMALEVGKGHLLA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
+RL +L + G + P SLGK RE + + RE +L NGI ++ V +
Sbjct: 311 YRLGRLKDAGEVEPAQVSLGK---LNNCREAIKVARECRTILAANGITLEYPVIR 362
>gi|15839783|ref|NP_334820.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
gi|385989904|ref|YP_005908202.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis CCDC5180]
gi|385993499|ref|YP_005911797.1| glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis CCDC5079]
gi|424946179|ref|ZP_18361875.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis NCGM2209]
gi|449062395|ref|YP_007429478.1| glutaryl-CoA dehydrogenase [Mycobacterium bovis BCG str. Korea
1168P]
gi|13879912|gb|AAK44634.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
CDC1551]
gi|339293453|gb|AEJ45564.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
CCDC5079]
gi|339297097|gb|AEJ49207.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
CCDC5180]
gi|358230694|dbj|GAA44186.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis NCGM2209]
gi|379026524|dbj|BAL64257.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|449030903|gb|AGE66330.1| glutaryl-CoA dehydrogenase [Mycobacterium bovis BCG str. Korea
1168P]
Length = 396
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 42 PPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGA 97
PP D D L+S+E AVR VR + + P +A ++E + P + + G
Sbjct: 7 PPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVTPHVAAWFEDGDLPVARDLAKQFGE 66
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G + G+GC G S +A E+ D+ + + V SLAM IA GS+EQK+
Sbjct: 67 LGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIASFGSDEQKR 126
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + + C+ LTEP GSD +A+ T A + W++ G K WI N + ADV ++
Sbjct: 127 QWLPGMATGDLLGCFGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIV 186
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V D PG T I +K+ LR +++L V +P + LPG
Sbjct: 187 WA--ATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGL 244
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y ++R QFG P+A FQ+ Q KLV M +
Sbjct: 245 RAPLACLSEARYGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVEL 304
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L ++ + P S GK T A + R +LGGNGI ++ V +
Sbjct: 305 HKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALKICRTARTILGGNGISLEYPVIR 363
>gi|374311029|ref|YP_005057459.1| butyryl-CoA dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358753039|gb|AEU36429.1| Butyryl-CoA dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 387
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 187/348 (53%), Gaps = 6/348 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E++ +R +VR E+EIAP ++E+ EK+EFP V+ KLG + + G + G G
Sbjct: 10 LNEEQEQLRREVRAFAEREIAPHVSEWDEKSEFPHAVVKKLGEMGLMGVIFPEELGGSGM 69
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+AI E++RVD S + H+SL + L G++EQ+++++P LA + W
Sbjct: 70 GYVEYVLAIEELSRVDGSVGIIVASHNSLCTNHLMLGGNDEQRKRWIPKLASGEWLGSWG 129
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA----RNTTTNQING 229
LTEP GSDA + TTA KV+GGW+L G K +I N T+AD ++ A +T I+
Sbjct: 130 LTEPGSGSDAGGMRTTAMKVDGGWLLNGSKTFITNGTYADCALVLAVTDKEKSTHGGISA 189
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLAVSR 288
+LV+K G K ENK+GLR +++ + +P+E+ + + F+D +VL R
Sbjct: 190 FLVEKGTKGFRPGKKENKLGLRASDTAELIFENCLIPEENIVGKLGEGFKDAMRVLDGGR 249
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A +G++ G D +Y ++R+QFG ++ FQ Q KL M + A L+ R
Sbjct: 250 ISIAALSLGMARGALDAAMKYAQQRRQFGKAISEFQAIQFKLADMATQLDAAWLLTMRAA 309
Query: 349 KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ + G A++ K + + A G ++ GG G + D+ K
Sbjct: 310 RTKDAGQKVTMEAAMAKLYASEAACRICDEGVQIHGGYGFIKDYPAEK 357
>gi|310819471|ref|YP_003951829.1| acyl-CoA dehydrogenase-like protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392543|gb|ADO70002.1| Acyl-CoA dehydrogenase-like protein [Stigmatella aurantiaca
DW4/3-1]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 179/350 (51%), Gaps = 3/350 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D ++LLT EE+A R V ++KE+ PI+ ++ + FP H+IP L + V G +
Sbjct: 7 TDLLLIEELLTDEEKAARDTVARFVDKEVLPIIGHHFREGTFPAHLIPGLAEMGVLGANL 66
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+GYGC G + + + E+ R D+ +F V SL M I GS+EQK++ LP +AQ
Sbjct: 67 QGYGCAGMNTVSYGLILQELERGDSGLRSFASVQGSLCMFPIHAYGSDEQKERLLPGMAQ 126
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT-- 223
I C+ LTEP +GS+ + T A K W+L G K WI N ADV V++A+
Sbjct: 127 GRLIGCFGLTEPDFGSNPGGMRTRAVKDGDTWVLNGAKAWITNGAIADVAVVWAKTEEGG 186
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
I G+LV+K PG T +I K LR ++ + V VP + LP V +
Sbjct: 187 AESIRGFLVEKGMPGFTAREIPGKFSLRASVTSELSFQDVRVPGRNVLPKVTGLRGPLSC 246
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R+ +A+ G ++ ++ Y RKQF G +A +Q+ Q+KL ML I L
Sbjct: 247 LNNARLGIAFAVTGAAIACFEGAREYALARKQFDGKSIAGYQLTQEKLADMLQEIVKAQL 306
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
+ RL +L ++G TP SL K A + R + G NGI +
Sbjct: 307 LALRLARLKDEGKATPVMVSLAKRNNVKAALDIARSARGVYGANGITDAY 356
>gi|73540508|ref|YP_295028.1| acyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72117921|gb|AAZ60184.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
eutropha JMP134]
Length = 397
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 191/358 (53%), Gaps = 4/358 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT++E+AVR + ++ P + + + + + ++G L + G TI
Sbjct: 10 ADPLLLDQQLTADERAVRDASAAYCQDKLMPRVLQSFRNEKTDVEIFREMGELGLLGPTI 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG PG + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 70 PEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGTEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 130 TGEWIGCFGLTEPNHGSDPGSMVTRAKKVNGGYELTGAKMWITNSPIADVFVVWAKLAGE 189
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I+L +VFVP+E+ +PGV +
Sbjct: 190 DGKEDIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVFVPEENIMPGVKGLKGPF 249
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + +Y +RKQFG PLA Q+ Q+KL M I +
Sbjct: 250 TCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAQTQLVQKKLADMQTEITLGL 309
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
RL ++ ++G S+ K ++ + + R++LGGNGI +F V + ++
Sbjct: 310 QGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVV 367
>gi|398874225|ref|ZP_10629449.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM74]
gi|398195976|gb|EJM82996.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM74]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRILEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ + A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMISRARKVEGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|117621521|ref|YP_855791.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562928|gb|ABK39876.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 391
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 195/358 (54%), Gaps = 11/358 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D L EE+ +R R+ + + P + E + +F ++ +LG L + G T+
Sbjct: 10 DPFFLDGQLGEEERLIRDAARDYCQARLMPRVLEANRREQFDRTIMNELGELGLLGATLP 69
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YGC G + + E+ RVD+ + + V SSL M I G E Q+Q++LP LA+
Sbjct: 70 EQYGCAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGDEAQRQRWLPGLAR 129
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ + A +V+GG++L G K WI NS AD+ V++A+
Sbjct: 130 GELVGCFGLTEPDAGSDPGSMKSRAERVDGGYLLTGNKMWITNSPIADLFVVWAK--LDG 187
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+I G++++K GL+ KIE K LR G+I++++VFVP+ +RL GV+ + L
Sbjct: 188 EITGFVLEKGMAGLSAPKIEGKFSLRASITGEIVMERVFVPEANRLAGVSGLKGPFGCLN 247
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y +R+QFG PLAA Q+ Q KL N+Q I +G
Sbjct: 248 KARYGIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKLA----NMQTEIALGL 303
Query: 346 RLC----KLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ C +L ++G SL K +A E + R++ GGNGI +F V + +M
Sbjct: 304 QGCLQAGRLMDEGRCPVELVSLIKRNSCGKALEIARVARDMHGGNGISDEFHVIRHVM 361
>gi|409390472|ref|ZP_11242209.1| glutaryl-CoA dehydrogenase [Gordonia rubripertincta NBRC 101908]
gi|403199490|dbj|GAB85443.1| glutaryl-CoA dehydrogenase [Gordonia rubripertincta NBRC 101908]
Length = 395
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P + + D LL ++E A+R VR+ + + P + +++E A+ P I K LG +
Sbjct: 4 PSTLAQLFALDSLLDADEIAIRDTVRDFADARLRPHIGDWFEDAKLPAREIAKELGQIGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLEGYGCPGTSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A + I C+ LTEP +GS+ S + T A + W+L G K WI N + ADV V++A+
Sbjct: 124 PRMAAGDAIGCFGLTEPDFGSNPSGMRTNAKRDGNDWLLNGTKMWITNGSIADVAVVWAQ 183
Query: 221 NTTTNQ---INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++V D PG + +I K+ LR +++L V +P LP
Sbjct: 184 TDLADSPAGIRGFVVPTDTPGFSAPEIHKKMSLRASVTSELVLDNVRLPASAMLPKAEGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + + IG + + Y + R+ F PLA +QI Q K+ M +
Sbjct: 244 RGPLTSLSEARFGIIFGAIGAARDCLETAIDYSQSREVFEKPLAGYQITQTKIADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G + P S GK RE + + RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGEIRPEQISTGK---LNNTREAIKIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|350544737|ref|ZP_08914300.1| Glutaryl-CoA dehydrogenase [Candidatus Burkholderia kirkii UZHbot1]
gi|350527525|emb|CCD38006.1| Glutaryl-CoA dehydrogenase [Candidatus Burkholderia kirkii UZHbot1]
Length = 396
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 193/355 (54%), Gaps = 5/355 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAP-IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D D LT +E+ VR R ++ ++ P +M + E+ P + ++G L + G T
Sbjct: 10 EDPLLLDQQLTEDERMVRDAARAYVQDKLQPRVMQAFREEKTDP-AIFREIGELGLLGPT 68
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG PG + + E+ RVD+ + + V SSL M+ I GS+ QK+KYLP L
Sbjct: 69 IPEQYGGPGLNYVCYGLIAREMERVDSGYRSMMSVQSSLVMVPINTFGSDVQKEKYLPKL 128
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--N 221
A+ I C+ LTEP GSD +++ T A KV+ G+ L G K WI NS ADV V++A+
Sbjct: 129 ARGEWIGCFGLTEPNAGSDPASMTTRAKKVQNGYSLSGTKMWISNSPIADVFVVWAKLEE 188
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
++I G++++K L+ I K+GLR G+I++ +VFVP+E+ LP V +
Sbjct: 189 DGRDEIRGFILEKGWKRLSALAIHGKVGLRASITGEIVMDEVFVPEENMLPNVRGLKGPF 248
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 249 TCLNSARYGISWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
RL ++ ++G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 309 QGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 363
>gi|398947654|ref|ZP_10672290.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM33]
gi|398161566|gb|EJM49793.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM33]
Length = 393
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRILEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|406032962|ref|YP_006731854.1| glutaryl-CoA dehydrogenase [Mycobacterium indicus pranii MTCC 9506]
gi|405131507|gb|AFS16762.1| Glutaryl-CoA dehydrogenase [Mycobacterium indicus pranii MTCC 9506]
Length = 394
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 181/361 (50%), Gaps = 5/361 (1%)
Query: 39 SKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-L 95
+K PP Y D L+ +E+AVR VRE + + P +AE++E + P + K
Sbjct: 3 NKTPPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKGF 62
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 63 GQLGLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIWNFGSEEQ 122
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A + C+ LTEP GSD +A+ T A + W++ G+K WI N + ADV
Sbjct: 123 KQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVINGRKLWITNGSVADVA 182
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A T + + G++V G + I +K+ LR +++L V +P E LP
Sbjct: 183 VVWA--NTDDGVRGFIVPTKTAGFSANTIHHKLSLRASITSELVLDDVRLPAEAMLPEAK 240
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 241 GLRGPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMAV 300
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 301 ELHKGQLLSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPVI 360
Query: 396 K 396
+
Sbjct: 361 R 361
>gi|301346698|ref|ZP_07227439.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB056]
gi|301510079|ref|ZP_07235316.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB058]
gi|421621978|ref|ZP_16062889.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC074]
gi|421642408|ref|ZP_16082924.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-235]
gi|421649047|ref|ZP_16089443.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-251]
gi|421699149|ref|ZP_16138684.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-58]
gi|421795263|ref|ZP_16231347.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-21]
gi|421798933|ref|ZP_16234941.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Canada BC1]
gi|445487614|ref|ZP_21457885.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii AA-014]
gi|193076509|gb|ABO11161.2| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
gi|404571776|gb|EKA76825.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-58]
gi|408513135|gb|EKK14769.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-235]
gi|408514296|gb|EKK15903.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-251]
gi|408696741|gb|EKL42270.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC074]
gi|410402150|gb|EKP54279.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-21]
gi|410411144|gb|EKP63024.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Canada BC1]
gi|444768504|gb|ELW92719.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii AA-014]
Length = 403
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|337279455|ref|YP_004618927.1| glutaryl-CoA dehydrogenase [Ramlibacter tataouinensis TTB310]
gi|334730532|gb|AEG92908.1| Candidate glutaryl-CoA dehydrogenase [Ramlibacter tataouinensis
TTB310]
Length = 392
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 189/343 (55%), Gaps = 2/343 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT +E+AVR ++++AP + E + + ++G + + G TI + YG G
Sbjct: 19 LTDDERAVRDAAHAYCQEKLAPRVLEAFRTETTDPAIFREMGEMGLLGPTIPETYGGAGL 78
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ E+ RVD+ + + V SSL M+ I G+E K+KYLP LA I C+
Sbjct: 79 DYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGNEATKRKYLPRLATGEYIGCFG 138
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVK 233
LTEP +GSD +++ T A KV+GG+ L G K WI NS FADV V++A++ I G++++
Sbjct: 139 LTEPNHGSDPASMITRARKVDGGYRLTGSKMWISNSPFADVFVVWAKDDE-GAIRGFVLE 197
Query: 234 KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAW 293
K GL+ KI+ K+GLR G+I++ +VF P+E+ P V + L +R +AW
Sbjct: 198 KGWKGLSAPKIKGKVGLRASVTGEIVMDEVFCPEENAFPEVRGLKGPFTCLNSARYGIAW 257
Query: 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK 353
+G + + +Y+ +RKQFG PLAA Q+ Q+KL M I + RL ++ ++
Sbjct: 258 GALGAAEDCWHRARQYVLDRKQFGKPLAANQLVQKKLADMQTEITLGLQGCLRLGRMKDE 317
Query: 354 GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
G S+ K +A + + R+++GGNGI +F VA+
Sbjct: 318 GTAAVEITSIMKRNSCGKALDIARVARDMMGGNGISDEFGVAR 360
>gi|119898215|ref|YP_933428.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
gi|119670628|emb|CAL94541.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
Length = 395
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 187/352 (53%), Gaps = 2/352 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D D LT E+ VR R ++++ P + E + + ++G L + G TI
Sbjct: 11 ADPLFLDSQLTDVERMVRDTARAYCQEKLLPRVQEAFRHERTDREIFNEMGELGLLGPTI 70
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA
Sbjct: 71 PEQYGGAGMNYISYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLA 130
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD ++ T A KV GG+ + G K WI NS ADV V++A++
Sbjct: 131 TGEWVGCFGLTEPNHGSDPGSMITRAKKVPGGYSISGAKMWITNSPIADVFVVWAKDDEG 190
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G++++K GL+ I K+GLR G+I++ +VF P+E+ P V + L
Sbjct: 191 D-IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLKGPFTCL 249
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + Y+ +Y +RKQFG PLAA Q+ Q+KL ML I +
Sbjct: 250 NSARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLVQKKLADMLTEITLGLQAC 309
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++ +L + G S+ K +A + R++LGGNGI +F VA+
Sbjct: 310 LQVGRLKDAGNAPVEITSIIKRNSCGKALDIARTARDMLGGNGISDEFCVAR 361
>gi|404417361|ref|ZP_10999160.1| acyl-CoA dehydrogenase [Staphylococcus arlettae CVD059]
gi|403490251|gb|EJY95797.1| acyl-CoA dehydrogenase [Staphylococcus arlettae CVD059]
Length = 401
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 177/346 (51%), Gaps = 4/346 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHS 114
LT E + ++ + +E + + ++W A P LG L + G G
Sbjct: 23 LTDGEVTLLKQLDDLLESKYRDSINDHWVNATIPEDFFDDLGKLNYFNNPLLFEGREGAK 82
Query: 115 VTGAAIAI---AEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
IAR D S T + VH L + GS+EQ Y+P L C
Sbjct: 83 TPSQLFQFFMSYTIARFDVSLVTLLGVHQGLGHNSFLFGGSKEQVAYYIPKLQSHELRTC 142
Query: 172 WALTEPAYGSD-ASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 230
+ALTEP +GSD A L TTA + WIL G+KRWIG + ADV+ ++A + T + G+
Sbjct: 143 FALTEPNHGSDVAGGLETTAVRDGDKWILNGEKRWIGGAHLADVIPVYAVDPETGKPKGF 202
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
+++ D G+ + I+NKI L+IV N +I L V V + +RL +NSF+D +KVL +R
Sbjct: 203 IIRPDQEGVEIDIIQNKIALKIVPNANIKLNNVVVEESERLQNINSFKDIAKVLYSTRAG 262
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
VA+ G G Y+ +RKQFG L+ FQ+ Q+KL M GN+ + + +L ++
Sbjct: 263 VAYMATGAIAGALRATLNYVTQRKQFGKKLSQFQLIQEKLAMMEGNLAHAMSMCAQLARM 322
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
G S K R R++VA+GR + GGNGIL+D+ +A+
Sbjct: 323 QANGEYDEVATSTAKMMNALRLRDSVAMGRGITGGNGILADYDIAR 368
>gi|398867257|ref|ZP_10622722.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM78]
gi|398237539|gb|EJN23290.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM78]
Length = 393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAQQFAADKLAPRVLEAFRHEQTDPAIFREMGETGLLGATIPESYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E KQKYLP LA + I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGNEATKQKYLPKLASGHYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ QI G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDE-GQIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VF P+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPVIHGKVGLRASITGEIVMDNVFCPEENAFPDVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+AW +G + + +Y+ +R QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GIAWGALGAAEDCWHTARQYVLDRNQFGRPLAASQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + L R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARLARDMLGGNGISDEFGVAR 360
>gi|383640179|ref|ZP_09952585.1| glutaryl-CoA dehydrogenase [Sphingomonas elodea ATCC 31461]
Length = 394
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 186/352 (52%), Gaps = 2/352 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + D LT EE+ V+ R+ + E+ P + + + F ++ ++G L + G TI
Sbjct: 11 DPFGLDGELTDEERMVQGAARDYAQGELLPRVTSAYLEERFDREIMAEMGTLGLLGPTIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + E+ RVD+ + + V SSL M I GSEEQ++KYLP LA
Sbjct: 71 ETYGGAGLGYVAYGLVAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRRKYLPKLAS 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD + + T A K++GG+ + G K WI NS ADV V++A++ +
Sbjct: 131 GEWVGCFGLTEPDAGSDPAGMRTRAEKIDGGYRITGAKMWITNSPIADVFVVWAKSDAHD 190
Query: 226 -QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
I G+++++ GLT KIE K+ LR G+I++ V V ++ LP V + L
Sbjct: 191 GAIRGFVLERGMKGLTSPKIEGKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGPFGCL 250
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R +AW +G + + +Y +R QFG PLAA Q+ Q KL M I +
Sbjct: 251 NRARYGIAWGTMGAAEACFHAARQYTLDRHQFGRPLAATQLVQLKLANMQTEIALGLQAA 310
Query: 345 WRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++++ G + P S+ K +A E + R++ GGNGI +DF V +
Sbjct: 311 LRCGRMFDAGTLAPEAISIIKRNNCGKALEIARVARDMHGGNGISADFHVIR 362
>gi|254230755|ref|ZP_04924082.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
gi|124599814|gb|EAY58824.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
Length = 396
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 42 PPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGA 97
PP D D L+S+E AVR VR + + P +A ++E + P + + G
Sbjct: 7 PPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVTPHVAAWFEDGDLPVARDLAKQFGE 66
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G + G+GC G S +A E+ D+ + + V SLAM IA GS+EQK+
Sbjct: 67 LGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIASFGSDEQKR 126
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + + C+ LTEP GSD +A+ T A + W++ G K WI N + ADV ++
Sbjct: 127 QWLPGMATGDLLGCFGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIV 186
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V D PG T I +K+ LR +++L V +P + LPG
Sbjct: 187 WA--ATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGL 244
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y ++R QFG P+A FQ+ Q KLV M +
Sbjct: 245 RAPLACLSEARYGIVWGAMGAARSAWPCALDYARQRTQFGRPIAGFQLTQAKLVDMAVEL 304
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L ++ + P S GK T A + R +LGGNGI ++ V +
Sbjct: 305 HKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALKICRTARTILGGNGISLEYPVIR 363
>gi|70733629|ref|YP_257269.1| glutaryl-CoA dehydrogenase [Pseudomonas protegens Pf-5]
gi|68347928|gb|AAY95534.1| glutaryl-CoA dehydrogenase [Pseudomonas protegens Pf-5]
Length = 393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAEQFAQDKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIAR 360
>gi|398891481|ref|ZP_10644857.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM55]
gi|398187162|gb|EJM74516.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM55]
Length = 393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRILEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ + A KVEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMISRARKVEGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|393759838|ref|ZP_10348650.1| glutaryl-CoA dehydrogenase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393161650|gb|EJC61712.1| glutaryl-CoA dehydrogenase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 397
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 4/346 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L+ EE+ VR ++++ P + E + + + ++G+L + G TI YG G
Sbjct: 19 LSDEERMVRDAAHAYAQEKLLPRVLEAFRHEQTDPAIFAEMGSLGLLGATIPDTYGGAGL 78
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ RVD+ + + V SSL M+ I GSEEQKQKYLP LA I C+
Sbjct: 79 NYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSEEQKQKYLPRLASGEWIGCFG 138
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---NTTTNQINGY 230
LTEP +GSD A+ + A KV+GG+ L G K WI NS ADVLV++A+ +I G+
Sbjct: 139 LTEPNHGSDPGAMESRALKVDGGYRLSGSKTWITNSPIADVLVVWAKVVGGEDDGKIRGF 198
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVM 290
+++K GL+ I K+GLR G+I++ V + D LP V+ + L +R
Sbjct: 199 ILEKGMKGLSTPAIHGKVGLRASLTGEIVMADVEISDSQMLPHVSGLRGPFTCLNSARYG 258
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL 350
+AW +G + + +Y +RKQFG PLAA Q+ Q+KL M I + RL ++
Sbjct: 259 IAWGALGAAESCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRM 318
Query: 351 YEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
++G S+ K +A + L R++LGGNGI +F +A+
Sbjct: 319 KDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIAR 364
>gi|121605031|ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594000|gb|ABM37439.1| acyl-CoA dehydrogenase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 394
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 185/343 (53%), Gaps = 2/343 (0%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT +E+ V R + +AP + E + + + ++G L + G TI + YG G
Sbjct: 21 LTDDERQVADAARAYSQDRLAPRVLEAFRNEKTDAAIFREMGELGLLGATIPEAYGGAGL 80
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ + E+ R+D+ + + V SSL M+ I G+E KQKYLP LA I C+
Sbjct: 81 NYVCYGLVAREVERIDSGYRSMLSVQSSLVMVPINAFGTEATKQKYLPRLATGEFIGCFG 140
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVK 233
LTEP +GSD ++ T A KV GG+ L G K WI NS ADV V++A++ I G++++
Sbjct: 141 LTEPDHGSDPGSMITRARKVPGGYSLSGNKMWITNSPIADVFVVWAKDDE-GAIRGFVLE 199
Query: 234 KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAW 293
K GL+ + K+GLR G+I++ VF P+E+ P V + L +R +AW
Sbjct: 200 KGWKGLSAPAVHGKVGLRASITGEIVMDAVFCPEENAFPEVRGLKGPFTCLNSARYGIAW 259
Query: 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK 353
+G + ++ +Y+ +RKQFG PLAA Q+ Q+KL M+ +I + RL ++ ++
Sbjct: 260 GALGAAEDCFERARQYVLDRKQFGKPLAANQLIQKKLADMMTDISLGLQGCLRLGRMKDE 319
Query: 354 GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
G S+ K +A + L R++LGGNGI +F VA+
Sbjct: 320 GMAAVEVTSIMKRNSCGKALDIARLARDMLGGNGISDEFGVAR 362
>gi|331236165|ref|XP_003330742.1| glutaryl-CoA dehydrogenase, mitochondrial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309309732|gb|EFP86323.1| glutaryl-CoA dehydrogenase, mitochondrial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 429
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 12/379 (3%)
Query: 29 SVAFPQATPASKFPPCASDYYQFDD-------LLTSEEQAVRMKVRECMEKEIAPIMAEY 81
+++ P+ AS+ P + Y ++D LLT +E A++ E ++++ P + E
Sbjct: 21 TISTPRRMLASQAKPASFVEYDWEDPLRLEKSLLTEDELAIKQASHEYCQEKLMPRVLEA 80
Query: 82 WEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
K F +++ ++G L G TI GYGC G S + E+ RVD+ + + V SS
Sbjct: 81 HRKESFDPNILKEMGKLGFLGPTISGYGCAGVSSVAYGLVAREVERVDSGYRSAMSVQSS 140
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATK-VEGGWILE 200
L M I GSEEQK K+LP LA N I C+ LTEP +GSD S + T AT+ GG+IL
Sbjct: 141 LVMHPIYAFGSEEQKSKFLPELASGNMIGCFGLTEPGHGSDPSGMLTRATEDPSGGYILS 200
Query: 201 GQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
G K WI N+ ADV V++A+ +I G++++K GL+ KIE+K+ LR G I +
Sbjct: 201 GSKTWITNAPIADVFVVWAKCDWDQKIRGFILEKGMKGLSAPKIEHKLSLRASATGSIYM 260
Query: 261 KKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPL 320
V VP + LP V + L +R +++ +G Y ER QF PL
Sbjct: 261 DSVPVPSTNVLPKVTGLKGPFACLNSARFGISFGVMGALEECVKRSREYSLERIQFNKPL 320
Query: 321 AAFQINQQKLVQMLGNIQAMI--LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVAL 378
AAFQ+ Q+KLV N +A+I +L ++ + G P SL K +A +
Sbjct: 321 AAFQLIQKKLVD--ANTEAVIGLCAAIQLGRMKDAGTWCPEMVSLLKRNNCGKALHHARI 378
Query: 379 GRELLGGNGILSDFLVAKV 397
++ GGN + ++ + ++
Sbjct: 379 LMDIFGGNAVSDEYHIGRI 397
>gi|257387180|ref|YP_003176953.1| acyl-CoA dehydrogenase [Halomicrobium mukohataei DSM 12286]
gi|257169487|gb|ACV47246.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
12286]
Length = 408
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 23/369 (6%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
DY + L EE+ +R RE +++ + P + E++E P H+ +G L T+
Sbjct: 3 DYLDLESDLDGEERMIRDTAREFVDEHVRPEIGEWFESGTSPDHLFEAMGELDFFAPTLS 62
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
PG S + + E+ D+ + V +L M I GSE Q++++LP LA
Sbjct: 63 WGTLPGVSPRSYGLLMQELEAGDSGVRSMASVQGALVMYPIHEFGSEAQRERWLPDLAAG 122
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR-----N 221
+ + C+ LTEP +GSD +++ TTA G+ L G K WI N+ ADV VI+ +
Sbjct: 123 DAVGCFGLTEPEHGSDPASMETTAVPDGDGYRLSGTKTWITNAPIADVAVIWCKIDDGDA 182
Query: 222 TTTNQINGYLVKKDAPGLT------------------VTKIENKIGLRIVQNGDILLKKV 263
T + + G LV D+ G++ ++I+ K+ +R G+I L+
Sbjct: 183 ETDDPVRGVLVDLDSEGVSEEQGETEPRQTDRSGGVETSEIDGKLSMRASSTGEIHLRDA 242
Query: 264 FVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAF 323
+VP++ LPGV + L +R +AW +G + ++ Y +R+QFG P+A F
Sbjct: 243 WVPEDALLPGVEGMKGPLSCLTEARYGIAWGAVGAARDCFEAAREYATDREQFGGPIARF 302
Query: 324 QINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELL 383
Q+ Q+KL +M I L+ RL L +G + P S+ K ARE RE+L
Sbjct: 303 QLQQEKLAEMATRITTAQLLADRLATLKARGDLRPQQVSMAKRNNVRMAREVAQTAREML 362
Query: 384 GGNGILSDF 392
GGNGI +D+
Sbjct: 363 GGNGITTDY 371
>gi|170724225|ref|YP_001751913.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
putida W619]
gi|169762228|gb|ACA75544.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
Length = 393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLSGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|423098226|ref|ZP_17086022.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Q2-87]
gi|397882153|gb|EJK98640.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Q2-87]
Length = 393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEICLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIAR 360
>gi|148557129|ref|YP_001264711.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
wittichii RW1]
gi|148502319|gb|ABQ70573.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
Length = 394
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 188/357 (52%), Gaps = 4/357 (1%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEI-APIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
SD + +D LT EE+ +R + E+ ++A Y E+ + P + P +GA + G T
Sbjct: 10 SDPFGLEDQLTDEERMIRDAAHGFAQSELQTRVIAAYREEVDAP-ELFPAMGAAGLLGAT 68
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YG S + EI RVD+ + V SSL M I GSEEQK+ YLP L
Sbjct: 69 LPEEYGGANASYVAYGLIAREIERVDSGYRSMASVQSSLVMHPIYAYGSEEQKRHYLPGL 128
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A I C+ LTEP GSD + T A + G++L G K WI N+ FADV V++A++
Sbjct: 129 AAGRLIGCFGLTEPDAGSDPGGMRTVARRDGDGYVLHGSKTWISNAPFADVFVVWAKSEA 188
Query: 224 -TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
QI G++++K GL+ KIE K+ LR G ILL +V V + LP V +
Sbjct: 189 HGGQIRGFILEKGMKGLSAPKIEGKLSLRASTTGMILLDEVKVGADALLPNVEGLKGPFG 248
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L +R ++W +G + + +Y +RKQFG PLAA Q+ Q+KL +M+ +I +
Sbjct: 249 CLNRARYGISWGALGAAEFCFHAARQYGLDRKQFGRPLAATQLYQKKLAEMMCDIGFGLQ 308
Query: 343 VGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L ++G P S+ K +A + R++ GGNGI ++ V + +M
Sbjct: 309 ASLRVGRLMDEGRFAPEMVSMVKRNNVGKALDIARQARDMHGGNGISEEYQVIRHMM 365
>gi|453381191|dbj|GAC84079.1| glutaryl-CoA dehydrogenase [Gordonia paraffinivorans NBRC 108238]
Length = 395
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 182/362 (50%), Gaps = 10/362 (2%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRV 100
P S + D LL EE A+R VR+ + P +A+++E A+ P I + LG +
Sbjct: 4 PSTLSQLFALDSLLEPEEIAIRDTVRDFANARLRPHIADWFEDAKLPVREIARELGGIGA 63
Query: 101 AGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G ++GYGCPG S T +A E+ VD+ + + V SLAM +I GSEEQK ++L
Sbjct: 64 LGMHLEGYGCPGTSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKNEWL 123
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P +A I C+ LTEP +GS+ S + T A + WIL G K WI N + ADV V++A+
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPSGMRTNARRDGEDWILNGTKMWITNGSVADVAVVWAK 183
Query: 221 ---NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
I G++V D PG + +I K+ LR +++L V +P LP
Sbjct: 184 TDLEEGARGIRGFVVPTDTPGFSAPEIGKKMSLRASVTAELVLDDVRLPASAMLPKAQGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R + + IG + + Y + R+ F PLA +Q+ Q KL M +
Sbjct: 244 RGPLSALNEARYGIVFGAIGAARDCLEAAIAYSQSREVFDKPLAGYQLTQAKLADMALEV 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLV 394
L+ + L +L ++G + P S GK RE + + RE +LG NGI ++ V
Sbjct: 304 GKGHLLAYHLGRLKDRGEVRPEQISTGK---LNNTREAIKIARECRTILGANGITLEYPV 360
Query: 395 AK 396
+
Sbjct: 361 IR 362
>gi|253797323|ref|YP_003030324.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis KZN 1435]
gi|297632882|ref|ZP_06950662.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN 4207]
gi|297729857|ref|ZP_06958975.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN R506]
gi|313657186|ref|ZP_07814066.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN V2475]
gi|375294605|ref|YP_005098872.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 4207]
gi|385997170|ref|YP_005915468.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium tuberculosis CTRI-2]
gi|392430815|ref|YP_006471859.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
gi|253318826|gb|ACT23429.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 1435]
gi|328457110|gb|AEB02533.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 4207]
gi|344218216|gb|AEM98846.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium tuberculosis CTRI-2]
gi|392052224|gb|AFM47782.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
Length = 395
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 42 PPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGA 97
PP D D L+S+E AVR VR + + P +A ++E + P + + G
Sbjct: 6 PPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVNPHVAAWFEDGDLPVARDLAKQFGE 65
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G + G+GC G S +A E+ D+ + + V SLAM IA GS+EQK+
Sbjct: 66 LGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIASFGSDEQKR 125
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + + C+ LTEP GSD +A+ T A + W++ G K WI N + ADV ++
Sbjct: 126 QWLPGMATGDLLGCFGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIV 185
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V D PG T I +K+ LR +++L V +P + LPG
Sbjct: 186 WA--ATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y ++R QFG P+A FQ+ Q KLV M +
Sbjct: 244 RAPLACLSEARYGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVEL 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L ++ + P S GK T A + R +LGGNGI ++ V +
Sbjct: 304 HKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALKICRTARTILGGNGISLEYPVIR 362
>gi|429334342|ref|ZP_19215009.1| glutaryl-CoA dehydrogenase [Pseudomonas putida CSV86]
gi|428760986|gb|EKX83233.1| glutaryl-CoA dehydrogenase [Pseudomonas putida CSV86]
Length = 393
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D L+ EE+ VR + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLSEEERMVRDSAYSFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A E L R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALEIARLARDMLGGNGISDEFGVAR 360
>gi|393214548|gb|EJD00041.1| acyl-CoA dehydrogenase domain-containing protein [Fomitiporia
mediterranea MF3/22]
Length = 419
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 189/373 (50%), Gaps = 4/373 (1%)
Query: 28 ISVAFPQATPASKFPPCA-SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
+SV AS F D + LLT EE AVR R ++++ P + E +
Sbjct: 13 VSVHLSSRRHASTFAKYDWEDPLNLESLLTEEEIAVRDTARSYCQEKLLPRVLEAQRTEK 72
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
F ++P++G L + G TIKGYGC G S + E+ R+D+ + + V SSL M
Sbjct: 73 FVPEILPEMGQLGLLGPTIKGYGCAGVSSVAYGLVACEVERIDSGYRSTMSVQSSLVMHP 132
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWI 206
I GS QK+KYLP L + I C+ LTEP +GSD + + T+A V+GG+IL G K WI
Sbjct: 133 IHAFGSASQKEKYLPRLGKGEIIGCFGLTEPNHGSDPAGMETSAEDVDGGFILNGSKTWI 192
Query: 207 GNSTFADVLVIFARNTTTNQINGYLVKK---DAPGLTVTKIENKIGLRIVQNGDILLKKV 263
N+ A +++I+AR +++ G+L+ + PGL + I+NK+ LR+ G + + V
Sbjct: 193 SNAPVAGLILIWARCKWDDKVRGFLIDRSQSSVPGLETSIIKNKLALRVSLTGSVFMDNV 252
Query: 264 FVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAF 323
+P + L G + + L +R ++W +G Y ERKQF P+A+F
Sbjct: 253 RIPKDSLLEGTDGLKSAFSCLNNARYGISWGVMGSLEDCVARTREYALERKQFKRPIASF 312
Query: 324 QINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELL 383
Q+ Q+KLV+ +L ++ +L +K + P S+ K A ++L
Sbjct: 313 QLIQKKLVEASTASAFGLLAALQVGRLKDKDMLAPEMVSMVKRANCVSALTHARTVLDIL 372
Query: 384 GGNGILSDFLVAK 396
GGN ++ V +
Sbjct: 373 GGNACADEYHVGR 385
>gi|393718277|ref|ZP_10338204.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
echinoides ATCC 14820]
Length = 394
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DD L +E+ +R R + ++AP + + ++ + ++GAL + G T+
Sbjct: 10 ADPFFLDDQLEDDERMIRDSARAYAQDKLAPRIIDAFQHEITDPDIFREMGALGLLGPTV 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + E+ RVD+ + + V SSL M I GSEEQK+ YLP LA
Sbjct: 70 PEEYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPILAYGSEEQKRTYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP GSD ++ T A KV+GG++L G K WI NS ADV VI+A++
Sbjct: 130 TGEWIGCFGLTEPDAGSDPGSMTTRAKKVDGGYLLSGAKTWISNSPIADVFVIWAKSEAH 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++V+K A GL KIE K+ LR G IL+ ++ + D+ LP V +
Sbjct: 190 GDGIRGFIVEKGAKGLATPKIEGKLSLRASITGMILMDEIELSDDALLPNVQGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +R QFG PLA Q+ Q+KL M I +
Sbjct: 250 LNRARYGISWGALGAAEFCFHAARQYGLDRNQFGTPLAGRQLYQKKLADMETEIALGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L + G P S+ K +A + R++ GGNGI ++ V + +M
Sbjct: 310 SLRVGRLMDAGKFAPEMISIVKRNNVGKALDIARNARDMHGGNGISGEYQVMRHLM 365
>gi|389680662|ref|ZP_10172012.1| glutaryl-CoA dehydrogenase [Pseudomonas chlororaphis O6]
gi|388555767|gb|EIM19010.1| glutaryl-CoA dehydrogenase [Pseudomonas chlororaphis O6]
Length = 393
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAEQFAQGKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMVTRARKVDGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F +A+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIAR 360
>gi|393725337|ref|ZP_10345264.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas sp.
PAMC 26605]
Length = 394
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 187/356 (52%), Gaps = 2/356 (0%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI 105
+D + DD L +E+ +R R + ++AP + + ++ + ++GA + G T+
Sbjct: 10 ADPFFLDDQLEDDERMIRDAARAYAQDKLAPRIIDAFQNETTDPEIFREMGAQGLLGPTV 69
Query: 106 -KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ YG G S + E+ RVD+ + + V SSL M I GSE QKQKYLP LA
Sbjct: 70 PEEYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIFAYGSEAQKQKYLPKLA 129
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP GSD ++ T A KV+GG++L G K WI NS ADV VI+A++
Sbjct: 130 SGEWIGCFGLTEPDAGSDPGSMTTRAKKVDGGYLLSGAKTWISNSPIADVFVIWAKSEAH 189
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+ I G++V+K A GL KIE K+ LR G IL+ ++ + ++ LP V +
Sbjct: 190 GDGIRGFIVEKGAKGLATPKIEGKLSLRASITGMILMDEIELSEDALLPDVQGLKGPFGC 249
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R ++W +G + + +Y +R QFG PLA Q+ Q+KL M I +
Sbjct: 250 LNRARYGISWGALGAAEFCFHAARQYGLDRNQFGTPLAGRQLYQKKLADMETEIALGLQA 309
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
R+ +L + G P S+ K +A + + R++ GGNGI ++ V + +M
Sbjct: 310 SLRVGRLMDAGKFAPEMISIVKRNNVGKALDIARMSRDMHGGNGISGEYQVMRHMM 365
>gi|443474172|ref|ZP_21064193.1| Glutaryl-CoA dehydrogenase [Pseudomonas pseudoalcaligenes KF707]
gi|442905107|gb|ELS30022.1| Glutaryl-CoA dehydrogenase [Pseudomonas pseudoalcaligenes KF707]
Length = 393
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI YG
Sbjct: 15 LDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMGEVGLLGATIPAEYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I GS+ QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSQAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A++ +I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKD-DAGEIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FILEKGWQGLSAPVIHGKVGLRASITGEIVMDNVFVPEENAFPDVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEYCWHTARQYVLDRNQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ E + R+++GGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLEIARVARDMMGGNGISDEFGVAR 360
>gi|330505673|ref|YP_004382542.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
mendocina NK-01]
gi|328919959|gb|AEB60790.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
mendocina NK-01]
Length = 392
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR ++ + ++AP + E + + + ++G + G TI + YG
Sbjct: 14 LDQQLTEEERMVRDSAQQFADDKLAPRVLEAFRHEQTDPKIFREMGETGLLGATIPEAYG 73
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E KQKYLP LA I
Sbjct: 74 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGNEATKQKYLPKLASGEYI 133
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++A++ +I G
Sbjct: 134 GCFGLTEPNHGSDPGSMVTRAKKVEGGYRLTGSKMWITNSPIADVFVVWAKD-DAGEIRG 192
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VF P+E+ P V + L +R
Sbjct: 193 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFCPEENAFPDVRGLRGPFTCLNSARY 252
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y+ +R QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 253 GISWGALGAAEFCWHTARQYVLDRNQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 312
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F +A+
Sbjct: 313 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGIAR 359
>gi|424920739|ref|ZP_18344100.1| Acyl-CoA dehydrogenase [Pseudomonas fluorescens R124]
gi|404301899|gb|EJZ55861.1| Acyl-CoA dehydrogenase [Pseudomonas fluorescens R124]
Length = 393
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|409048418|gb|EKM57896.1| hypothetical protein PHACADRAFT_139333 [Phanerochaete carnosa
HHB-10118-sp]
Length = 418
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 185/367 (50%), Gaps = 8/367 (2%)
Query: 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK 94
A+ +KF P D D LLT EE+A+R ++ + P + + EF ++P+
Sbjct: 25 ASTIAKFSP--EDPLNLDSLLTEEEKAIRDTAHAFCQERLLPRVLDAQRTEEFNRDLLPE 82
Query: 95 LGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE 154
+G + G TI GYGC G S + E+ RVD+ + V SSL M I G++
Sbjct: 83 MGRFGLLGPTIDGYGCAGVSNVAYGLIAREVERVDSGYRSTFSVQSSLVMNAICDYGTDA 142
Query: 155 QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADV 214
QK YLP LA+ I C+ LTEP +GSD + + T A +VEGG+ L G K WI N+ +D+
Sbjct: 143 QKDIYLPRLAKGEIIGCFGLTEPNHGSDPAGMETIAEEVEGGFKLHGAKTWISNAPVSDL 202
Query: 215 LVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
+I+AR N++ G+LV+K GL I++K+ LR G I L V V LP
Sbjct: 203 FIIWARCKWDNKVRGFLVEKGTKGLDAPAIKHKLALRCSLTGSIFLDNVLVGHNALLPHG 262
Query: 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHR---YLKERKQFGAPLAAFQINQQKLV 331
L +R ++W +G + D HR Y +R QFG PLA+FQ+ Q+K V
Sbjct: 263 KGLAAPFGCLNSARYGISWGAMG---ALEDCIHRTKAYALQRHQFGRPLASFQLVQKKFV 319
Query: 332 QMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSD 391
+ + + ++ +L ++G + P SL K +A E ++LGGN +
Sbjct: 320 DAMSEVALGLQASIQVGRLKDQGKVAPEMISLVKRNNCGKALEHARRVLDILGGNACADE 379
Query: 392 FLVAKVI 398
+ V + +
Sbjct: 380 YHVGRHV 386
>gi|398963803|ref|ZP_10679870.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM30]
gi|398149324|gb|EJM37977.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM30]
Length = 393
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|336450335|ref|ZP_08620786.1| acyl-CoA dehydrogenase [Idiomarina sp. A28L]
gi|336282730|gb|EGN75951.1| acyl-CoA dehydrogenase [Idiomarina sp. A28L]
Length = 391
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 187/354 (52%), Gaps = 3/354 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D +Q + LLT EE+ +R ++ + P + + F ++ ++GAL + G TI
Sbjct: 11 DPFQIESLLTDEERMIRDSAHAYCQENLQPRILMANREEHFHREIMNEMGALGLLGATIP 70
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + E+ RVD+ + + V SSL M I G+EEQ+ +YLP LA
Sbjct: 71 ESYGGAGVNHVCYGLIAREVERVDSGYRSAMSVQSSLVMYPIFEFGTEEQRHRYLPKLAS 130
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
+ C+ LTEP GSD ++ T A KV GG+ L G K WI NS ADV V++A+
Sbjct: 131 GEWVGCFGLTEPDAGSDPGSMKTRAKKVAGGFRLTGSKMWITNSPIADVFVVWAK--LEG 188
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
I G++++K GL+ KIE K LR G+I++ VFVP+++ P + + K L
Sbjct: 189 VIRGFVLEKGMEGLSAPKIEGKFSLRASITGEIVMDNVFVPEKNMFPEITGLKGPFKCLN 248
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R +AW +G + + +Y ER+QFG PLAA Q+ Q+KL M I +L
Sbjct: 249 KARYGIAWGAMGAAEFCWHAARQYTLEREQFGRPLAATQLIQKKLADMQTEISLALLGAL 308
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ ++ + A+ P SL K +A + R++ GGNG+ ++ V + +M
Sbjct: 309 QAGRMADNNALPPETISLIKRNSCGKALDIARTARDMHGGNGVSDEYHVIRHVM 362
>gi|424056817|ref|ZP_17794334.1| hypothetical protein W9I_00143 [Acinetobacter nosocomialis Ab22222]
gi|425740281|ref|ZP_18858455.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-487]
gi|407440350|gb|EKF46867.1| hypothetical protein W9I_00143 [Acinetobacter nosocomialis Ab22222]
gi|425495048|gb|EKU61238.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii WC-487]
Length = 406
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|159036184|ref|YP_001535437.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
arenicola CNS-205]
gi|157915019|gb|ABV96446.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
CNS-205]
Length = 386
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 182/354 (51%), Gaps = 9/354 (2%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGTI 105
D D L++EE+ +R VR+ ++ + P +A ++E+ P + + G L + G +
Sbjct: 5 DLLDVDSSLSAEERQIRGVVRQLVDDRVRPNVAGWYEEGRVPARELAREFGKLGLLGMHL 64
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
GYGC G S +A E+ D+ + + V SLAM I GS EQKQ++LP++A
Sbjct: 65 TGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIWRYGSAEQKQRWLPAMAH 124
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD +++ T A + W+L G K WI N++ ADV VI+AR T
Sbjct: 125 GEAIGCFGLTEPDHGSDPASMATRARRDGDDWVLHGTKMWITNASVADVAVIWAR--TDE 182
Query: 226 QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285
+ G+ V D PG+TV +I +K+ LR G+I L V +P RLP + L
Sbjct: 183 GVCGFAVPMDTPGVTVREIRHKMSLRASVTGEISLDDVRLPAAARLPEAVGLKAPLGCLT 242
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+R + W +G + + Y R QFG PLAAFQ+ Q KL M L+
Sbjct: 243 EARHGIVWGALGAARDCLETALDYATGRTQFGRPLAAFQLTQAKLADMAVEWNKGYLLAL 302
Query: 346 RLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L +L + + P S+GK RE +A+ R+ +LG NG+ D+ V +
Sbjct: 303 HLGRLADARRLRPHQVSVGK---LNNVREALAIARQCRTILGANGVSGDYPVMR 353
>gi|289445938|ref|ZP_06435682.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
gi|289418896|gb|EFD16097.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
Length = 395
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 182/359 (50%), Gaps = 6/359 (1%)
Query: 42 PPC--ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGA 97
PP D D L+S+E AVR VR + + P +A ++E + P + + G
Sbjct: 6 PPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVTPHVAAWFEDGDLPVARDLAKQFGE 65
Query: 98 LRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
L + G + G+GC G S +A E+ D+ + + V SLAM IA GS+EQK+
Sbjct: 66 LGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIASFGSDEQKR 125
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++LP +A + C+ LTEP GSD +A+ T A + W++ G K WI N + ADV ++
Sbjct: 126 QWLPGMATGGLLGCFGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIV 185
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A T + I G++V D PG T I +K+ LR +++L V +P + LPG
Sbjct: 186 WA--ATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGL 243
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + + Y ++R QFG P+A FQ+ Q KLV M +
Sbjct: 244 RAPLACLSEARYGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVEL 303
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ L +L ++ + P S GK T A + R +LGGNGI ++ V +
Sbjct: 304 HKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALKICRTARTILGGNGISLEYPVIR 362
>gi|398851692|ref|ZP_10608372.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM80]
gi|398246144|gb|EJN31641.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM80]
Length = 393
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQQKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|375110522|ref|ZP_09756744.1| acyl-CoA dehydrogenase domain-containing protein [Alishewanella
jeotgali KCTC 22429]
gi|374569466|gb|EHR40627.1| acyl-CoA dehydrogenase domain-containing protein [Alishewanella
jeotgali KCTC 22429]
Length = 391
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 191/356 (53%), Gaps = 7/356 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRE-CMEK-EIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D +QF LLT EE+ +R + C E+ + +MA E F ++ +LG L + G T
Sbjct: 10 DPFQFSQLLTEEERLIRDTAHQYCQERLQTRVLMANREE--HFHREIMNELGELGLLGAT 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGC + + E+ RVD+ + + V SSL M I G+E Q+ KYLP L
Sbjct: 68 LPEKYGCSAVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHEYGTEAQRMKYLPRL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP GSD +++ TTA +++GG++L G K WI NS ADV V++A+
Sbjct: 128 ATGEWVGCFGLTEPDAGSDPASMRTTAKRIDGGYLLNGSKMWITNSPIADVFVVWAK--L 185
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++++K GL+ KIE K LR G+I++ V VP++ LP V+ +
Sbjct: 186 DGEIRGFVLEKGMAGLSAPKIEGKFSLRASITGEIVMDNVAVPEDALLPNVSGLKGPFGC 245
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y +R QFG PLA Q+ Q+KL M I +L
Sbjct: 246 LNKARYGIAWGALGAAEFCWHAARQYTLDRIQFGRPLAQTQLVQKKLADMQTEISIGLLA 305
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L + G + P SL K +A E + R++ GGNGI ++ V + +M
Sbjct: 306 CLQAGRLMDAGLLPPETISLIKRNSCGKALEIARIARDMHGGNGIADEYHVIRHVM 361
>gi|421655773|ref|ZP_16096087.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-72]
gi|408506796|gb|EKK08500.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-72]
Length = 403
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|312129771|ref|YP_003997111.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906317|gb|ADQ16758.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 388
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 192/359 (53%), Gaps = 8/359 (2%)
Query: 40 KFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALR 99
+FP D+Y ++LLT E+ VR V E ++EI PI+ ++ +KA FP H++PK+G +
Sbjct: 3 RFP----DFYGMEELLTEEQLLVRQSVHEFCQREIRPIIEDHAQKATFPRHLVPKMGEMG 58
Query: 100 VAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
+ G TI + YG G + + E+ RVD+ + V SL M I GSE QK K
Sbjct: 59 LFGPTIPETYGGLGADYITYGLMMQELERVDSGIRSTASVQGSLVMFPIFEFGSEAQKAK 118
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGW-ILEGQKRWIGNSTFADVLVI 217
YLP LA + + LTEP +GS+ + T + EG + IL G K WI N+ F D+ V+
Sbjct: 119 YLPKLASGEWLGSFGLTEPDFGSNPGGM-LTHFREEGDFLILNGSKTWISNAPFCDIAVV 177
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A+N +I G +V++ G + +I+NK LR G+++ +V VP + LPG +
Sbjct: 178 WAKNEQ-GRIKGLIVERGMEGFSTPEIKNKWSLRASATGELVFDEVKVPKSNLLPGADGL 236
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ K L +R ++W IG ++ Y +Y ER QF P+A+FQ+ Q+KL + L I
Sbjct: 237 RSPLKCLDNARYGISWGAIGAAVDCYLTAKQYALERIQFDKPIASFQLTQKKLAEFLTEI 296
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
L+ W+L G + S+ K A A R++LGGNGI +F + +
Sbjct: 297 TKAQLLTWKLGVNKNAGKASSAQISMAKRNNVAMALNIAREARQILGGNGITGEFSIMR 355
>gi|398803700|ref|ZP_10562718.1| acyl-CoA dehydrogenase [Polaromonas sp. CF318]
gi|398095953|gb|EJL86284.1| acyl-CoA dehydrogenase [Polaromonas sp. CF318]
Length = 398
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 193/359 (53%), Gaps = 11/359 (3%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAP--IMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D + F + L+ +E+A+ ++++ P +MA EK F ++ + GA+ G T
Sbjct: 9 DPFFFMEQLSEDERAIADAAHAFCQEKLQPRVLMAARHEK--FDREIMNEAGAMGFLGST 66
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
I+GYGC G + + E+ RVD+ + I V SSL M I GSE QKQKYLP LA
Sbjct: 67 IEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPINAYGSEAQKQKYLPKLA 126
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD +++ T A V+GG+IL+G K WI NS ADV +++A+
Sbjct: 127 TGEWVGCFGLTEPNHGSDPASMLTRARPVDGGFILKGAKMWITNSPIADVFIVWAKLQDP 186
Query: 225 N-------QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+ I G++++K GL+ KIE K+ LR G+I++ VFVP+ + LP V+
Sbjct: 187 DGKVGGQESIRGFVLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLLPNVSGL 246
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L +R +AW +G + + +Y +R+QFG PLA Q+ Q+KL M I
Sbjct: 247 KGPFGCLNKARYGIAWGALGAAEDCWFRARQYTLDRQQFGRPLAQNQLIQKKLADMQTEI 306
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L ++ P SL K ++ + + R++ GGNGI ++ V +
Sbjct: 307 TLGLQACLRVGRLMDEDKAVPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIR 365
>gi|421663746|ref|ZP_16103890.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC110]
gi|408713085|gb|EKL58260.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC110]
Length = 403
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTEPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|289740975|gb|ADD19235.1| glutaryl-CoA dehydrogenase [Glossina morsitans morsitans]
Length = 420
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 195/371 (52%), Gaps = 7/371 (1%)
Query: 35 ATPASKFPPCAS--DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVI 92
AT ASK P + D + LT +E A+R R + + P + + + F ++
Sbjct: 20 ATKASKQAPKFNWQDPLNLESQLTEDEIAIRNSFRSFCQDSLLPRITKANREESFDKDIM 79
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+GAL G T+ GYGCPG S + EI RVD++ + + V SSLAM I GS
Sbjct: 80 KDIGALGALGCTLNGYGCPGVSNVAYGLLAREIERVDSAYRSALSVQSSLAMGAIYDFGS 139
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNST 210
++ K+KYLP LAQ I + LTEP +GSD + T A +IL G K WI +S
Sbjct: 140 DKLKEKYLPQLAQGKLIGAFGLTEPNHGSDPGGMETRAKYDNESKCFILNGSKSWITSSP 199
Query: 211 FADVLVIFARNTTTNQINGYLVKKDAP--GLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
ADVL+I+A+ ++ G+LV ++ GL+ KIE K LR G IL+ + VP+E
Sbjct: 200 IADVLIIWAKG-EDGKVRGFLVDREQSKKGLSTPKIEGKFSLRASITGMILMDDLHVPEE 258
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ LP V F L +R +AW +G + ++ +Y+ +RKQFG PLAA Q+ Q+
Sbjct: 259 NLLPNVVGFVGPFTCLNNARYGIAWGALGAAEACVEIARQYVLDRKQFGRPLAANQLIQK 318
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGI 388
KL +I + ++ +L EK TP S+ K +A E + R++LGGNGI
Sbjct: 319 KLADASTDIALGLQACLQVGRLKEKKLHTPEMISMIKRNNAGKALEIARVMRDVLGGNGI 378
Query: 389 LSDFLVAKVIM 399
++ + + +M
Sbjct: 379 SDEYHIIRHVM 389
>gi|148225687|ref|NP_001086623.1| glutaryl-CoA dehydrogenase [Xenopus laevis]
gi|50603795|gb|AAH77194.1| Gcdh-prov protein [Xenopus laevis]
Length = 440
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 190/375 (50%), Gaps = 3/375 (0%)
Query: 27 DISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE 86
DI + + S+ D D LT +E +R R ++++ P +
Sbjct: 34 DIQAQNEKKSSKSQVQFDYQDALGLDSQLTEDEIMIRDSFRSYCQEKLMPRILMANRNEV 93
Query: 87 FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 146
F +I ++G L V G TIKGYGC G S + E+ RVD+S + + V SSL M
Sbjct: 94 FDREIISEMGELGVLGSTIKGYGCAGTSYVAYGLLAREVERVDSSYRSVMSVQSSLVMHP 153
Query: 147 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKR 204
IA GSEEQK+KYLP LA + C+ LTEP +GSD + + T A + L G K
Sbjct: 154 IAAYGSEEQKEKYLPRLASGELLGCFGLTEPNHGSDPAGMETRARYNPSSKTYTLNGSKT 213
Query: 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVF 264
WI NS AD+ V++A ++ G+L+++ GL+ KI+ K LR G IL++ V
Sbjct: 214 WITNSPIADLCVVWA-VCEDGRVRGFLIERGTKGLSTPKIKGKFSLRASATGMILMEDVE 272
Query: 265 VPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
+P+E+ LP ++ L +R ++W +G + + +Y +R QFG PLA Q
Sbjct: 273 IPEENLLPKISGMGGPFGCLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQ 332
Query: 325 INQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLG 384
+ Q+KL ML +I + RL +L ++ P S+ K +A + R++LG
Sbjct: 333 LIQKKLADMLTDITIGLQACLRLGRLKDEKRAAPEMISMLKRNSCGKALDIARQARDMLG 392
Query: 385 GNGILSDFLVAKVIM 399
GNGI ++ + + +M
Sbjct: 393 GNGISDEYHIIRHVM 407
>gi|421809629|ref|ZP_16245462.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC035]
gi|410413989|gb|EKP65796.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC035]
Length = 403
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|388544219|ref|ZP_10147508.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. M47T1]
gi|388278047|gb|EIK97620.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. M47T1]
Length = 393
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMVRTSAEQFAQDKLAPRVLEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G++ QKQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTQAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A VEGG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARSVEGGYRLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGICDEFGVAR 360
>gi|395651439|ref|ZP_10439289.1| glutaryl-CoA dehydrogenase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 393
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + + ++AP + E + + + ++G + G I + YG
Sbjct: 15 LDQQLTEEERMVRDSAEQFAQDKLAPRVLEAFRHEKTDPAIFREMGETGLLGAMIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAESCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|345855303|ref|ZP_08808043.1| glutaryl-CoA dehydrogenase [Streptomyces zinciresistens K42]
gi|345633232|gb|EGX54999.1| glutaryl-CoA dehydrogenase [Streptomyces zinciresistens K42]
Length = 396
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 188/364 (51%), Gaps = 5/364 (1%)
Query: 36 TPASKFPPC-ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVI 92
+ +SK PP +D DDLL E+ AVR VR+ + P +A ++EK E P +
Sbjct: 2 SASSKLPPFDPADPLGVDDLLEPEDLAVRATVRDWAADRVLPHVAGWYEKGELPQIRELA 61
Query: 93 PKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGS 152
+LGAL G ++ GYGC G S +A E+ D+ + + V SLAM + GS
Sbjct: 62 RELGALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYALHRFGS 121
Query: 153 EEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212
EEQK+++LP +A I C+ LTEP +GSD +++ T A + W+L G+K WI N + +
Sbjct: 122 EEQKRRWLPGMAAGEIIGCFGLTEPDHGSDPASMRTHAKRDGTDWVLNGRKMWITNGSVS 181
Query: 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP 272
V V++A+ T + I G++V + G + +I++K+ LR +++L V +P + LP
Sbjct: 182 GVAVVWAQ--TDDGIRGFVVPAGSAGFSAPEIKHKLSLRASVTSELVLDDVRLPADAVLP 239
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
+ L+ +R + W +G + ++ Y + R+QFG P+ FQ+ Q KL
Sbjct: 240 EAVGLKGPLSCLSHARYGIVWGAMGAARSCFEAAVDYARTREQFGRPIGGFQLTQAKLAD 299
Query: 333 MLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDF 392
M + IL+ L + + G + P S GK A + R +LG NGI ++
Sbjct: 300 MALELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTSRTILGANGISLEY 359
Query: 393 LVAK 396
V +
Sbjct: 360 PVMR 363
>gi|332875821|ref|ZP_08443616.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
gi|384141941|ref|YP_005524651.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii MDR-ZJ06]
gi|387125104|ref|YP_006290986.1| acyl-CoA dehydrogenase [Acinetobacter baumannii MDR-TJ]
gi|403675079|ref|ZP_10937276.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. NCTC 10304]
gi|407931587|ref|YP_006847230.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii TYTH-1]
gi|417576695|ref|ZP_12227540.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-17]
gi|417883470|ref|ZP_12527711.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ABNIH4]
gi|421204597|ref|ZP_15661717.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii AC12]
gi|421536818|ref|ZP_15983045.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii AC30]
gi|421687336|ref|ZP_16127063.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-143]
gi|421702393|ref|ZP_16141875.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ZWS1122]
gi|421706131|ref|ZP_16145549.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ZWS1219]
gi|421792967|ref|ZP_16229105.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-2]
gi|424053587|ref|ZP_17791119.1| hypothetical protein W9G_02276 [Acinetobacter baumannii Ab11111]
gi|424062757|ref|ZP_17800242.1| hypothetical protein W9M_00040 [Acinetobacter baumannii Ab44444]
gi|425752696|ref|ZP_18870603.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-113]
gi|445468740|ref|ZP_21450953.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC338]
gi|332736001|gb|EGJ67033.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
gi|342235750|gb|EGU00319.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ABNIH4]
gi|347592434|gb|AEP05155.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii MDR-ZJ06]
gi|385879596|gb|AFI96691.1| acyl-CoA dehydrogenase [Acinetobacter baumannii MDR-TJ]
gi|395569916|gb|EJG30578.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-17]
gi|398325890|gb|EJN42048.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii AC12]
gi|404565522|gb|EKA70688.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii IS-143]
gi|404667725|gb|EKB35638.1| hypothetical protein W9G_02276 [Acinetobacter baumannii Ab11111]
gi|404675127|gb|EKB42843.1| hypothetical protein W9M_00040 [Acinetobacter baumannii Ab44444]
gi|407194135|gb|EKE65279.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ZWS1122]
gi|407194563|gb|EKE65702.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ZWS1219]
gi|407900168|gb|AFU36999.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii TYTH-1]
gi|409985239|gb|EKO41465.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii AC30]
gi|410398227|gb|EKP50449.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-2]
gi|425498927|gb|EKU64993.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii Naval-113]
gi|444774975|gb|ELW99046.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC338]
Length = 406
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|404401208|ref|ZP_10992792.1| glutaryl-CoA dehydrogenase [Pseudomonas fuscovaginae UPB0736]
Length = 393
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYG 109
D LT EE+ +R + + ++AP + E + + ++G + + G TI YG
Sbjct: 15 LDQQLTEEERMIRDTAEQFAQDKLAPRVLEAFRHERTDPAIFREMGEVGLLGATIPVEYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ RVD+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLATGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD A+ T A KV+GG+ L G K WI NS ADV V++A++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGAMITRARKVDGGYSLTGSKMWITNSPIADVFVVWAKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|424061054|ref|ZP_17798545.1| hypothetical protein W9K_02168 [Acinetobacter baumannii Ab33333]
gi|404669006|gb|EKB36915.1| hypothetical protein W9K_02168 [Acinetobacter baumannii Ab33333]
Length = 406
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFLEMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|397171262|ref|ZP_10494671.1| acyl-CoA dehydrogenase domain-containing protein [Alishewanella
aestuarii B11]
gi|396087161|gb|EJI84762.1| acyl-CoA dehydrogenase domain-containing protein [Alishewanella
aestuarii B11]
Length = 391
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 191/356 (53%), Gaps = 7/356 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRE-CMEK-EIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
D +QF LLT EE+ +R + C E+ + +MA E F ++ +LG L + G T
Sbjct: 10 DPFQFSQLLTEEERLIRDTAHQYCQERLQTRVLMANREE--HFHREIMNELGELGLLGAT 67
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
+ + YGC + + E+ RVD+ + + V SSL M I G+E Q+ KYLP L
Sbjct: 68 LPEKYGCSAVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHEYGTEAQRLKYLPKL 127
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A + C+ LTEP GSD +++ TTA +++GG++L G K WI NS ADV V++A+
Sbjct: 128 ASGEWVGCFGLTEPDAGSDPASMRTTAKRIDGGYLLNGSKMWITNSPIADVFVVWAK--L 185
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
+I G++++K GL+ KIE K LR G+I++ V VP++ LP V+ +
Sbjct: 186 DGEIRGFVLEKGMAGLSAPKIEGKFSLRASITGEIVMDNVAVPEDALLPNVSGLKGPFGC 245
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R +AW +G + + +Y +R QFG PLA Q+ Q+KL M I +L
Sbjct: 246 LNKARYGIAWGALGAAEFCWHAARQYTLDRIQFGRPLAQTQLVQKKLADMQTEISIGLLA 305
Query: 344 GWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIM 399
+ +L + G + P SL K +A E + R++ GGNGI ++ V + +M
Sbjct: 306 CLQAGRLMDAGLLPPETISLIKRNSCGKALEIARIARDMHGGNGIADEYHVIRHVM 361
>gi|387878067|ref|YP_006308371.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium sp. MOTT36Y]
gi|386791525|gb|AFJ37644.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium sp. MOTT36Y]
Length = 394
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 181/361 (50%), Gaps = 5/361 (1%)
Query: 39 SKFPPCASDY--YQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-L 95
+K PP Y D L+ +E+AVR VRE + + P +AE++E + P + K
Sbjct: 3 NKTPPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKGF 62
Query: 96 GALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQ 155
G L + G + GYGC G S +A E+ D+ + + V SLAM I GSEEQ
Sbjct: 63 GQLGLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIWNFGSEEQ 122
Query: 156 KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVL 215
KQ++LP +A + C+ LTEP GSD +A+ T A + W+L G+K WI N + ADV
Sbjct: 123 KQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLTGRKLWITNGSVADVA 182
Query: 216 VIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN 275
V++A T + + G++V G + I +K+ LR +++L V +P + LP
Sbjct: 183 VVWA--NTDDGVRGFIVPTKTAGFSANTIHHKLSLRASITSELVLDDVRLPAKAMLPEAK 240
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
+ L+ +R + W +G + + Y +R QFG P+A FQ+ Q KLV M
Sbjct: 241 GLRGPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKLVDMAV 300
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395
+ L+ L +L + + P S GK T A E R +LGGNGI ++ V
Sbjct: 301 ELHKGQLLSLHLGRLKDSVGLRPEQVSFGKLNNTREAIEICRTARTILGGNGISLEYPVI 360
Query: 396 K 396
+
Sbjct: 361 R 361
>gi|296282328|ref|ZP_06860326.1| glutaryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
Length = 391
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 182/357 (50%), Gaps = 2/357 (0%)
Query: 42 PPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVA 101
P A+D ++ DD LT +E+ +R + E+ P + E + + + P +G +
Sbjct: 3 PFDATDPFRLDDQLTEDERMIRESAHAFAQSELQPRVIEAFREETSAPELFPLMGKAGLL 62
Query: 102 GGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYL 160
G TI + YG G + EI RVD+ + V SSL M I GSEEQK+KYL
Sbjct: 63 GATIPEEYGGAGAGYVAYGLIAREIERVDSGYRSMASVQSSLVMYPIHAFGSEEQKKKYL 122
Query: 161 PSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 220
P LA I C+ LTEP GSD + + T A K +++ G K WI NS FADV V++A+
Sbjct: 123 PGLASGELIGCFGLTEPDAGSDPAGMKTVAKKDGDDYVISGSKTWISNSPFADVFVVWAK 182
Query: 221 NTT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQD 279
+ I G++++K GL+ KIE KI LR G I++ +V VP P V +
Sbjct: 183 SEEHGGAIRGFVLEKGMEGLSAPKIEGKISLRASTTGMIMMDEVRVPASAMFPEVQGLKG 242
Query: 280 TSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
L +R ++W +G + D +Y +R+QFG PLA+ Q+ Q KL ML I
Sbjct: 243 PFNCLNRARYGISWGAMGAAEFCMDAAKQYGLDRQQFGVPLASKQLYQLKLADMLTEIAL 302
Query: 340 MILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ R+ +L ++G +P S+ K +A + R++ GGNGI ++ V +
Sbjct: 303 GLQASLRVGRLMDEGNWSPDMVSIVKRNNVGKALNIARVSRDMHGGNGISEEYQVIR 359
>gi|260553825|ref|ZP_05826094.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
gi|260405035|gb|EEW98536.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
Length = 406
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 18 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 77
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 78 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 137
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 138 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEVSAE 197
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 198 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 257
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 258 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQMEIALGL 317
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 318 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 372
>gi|418474132|ref|ZP_13043654.1| acyl CoA dehydrogenase [Streptomyces coelicoflavus ZG0656]
gi|371545251|gb|EHN73889.1| acyl CoA dehydrogenase [Streptomyces coelicoflavus ZG0656]
Length = 397
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 184/359 (51%), Gaps = 7/359 (1%)
Query: 41 FPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGAL 98
F P +D DDLL E+ AVR VR + P +A+++EK E P + +LG +
Sbjct: 10 FDP--ADPLGIDDLLEPEDLAVRDTVRGWAADRVLPYVADWYEKGELPGIRELARELGGI 67
Query: 99 RVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQK 158
G +++GYGC G S +A E+ D+ + + V SLAM I GSEEQK+
Sbjct: 68 GALGMSLEGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKEA 127
Query: 159 YLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVI 217
+LP +A I C+ LTEP +GSD + + T A + GG W+L G+K WI N + A V V+
Sbjct: 128 WLPRMAAGEVIGCFGLTEPDHGSDPANMRTRAKRDAGGDWVLNGRKMWITNGSVAGVAVV 187
Query: 218 FARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
+A+ T I G++V D+ G + +I++K LR ++++ V +P + LP V
Sbjct: 188 WAQ--TEEGIRGFVVPTDSAGFSAPEIKHKWSLRASVTSELVMDDVRLPADAVLPEVTGL 245
Query: 278 QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
+ L+ +R + W +G + ++ Y K R+QFG P+ FQ+ Q KL M +
Sbjct: 246 RGPLSCLSHARYGIVWGSMGAARSSFEAAVEYAKSREQFGRPIGGFQLTQAKLADMAVEL 305
Query: 338 QAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
IL+ L + + G + P S GK A + R +LG NGI ++ V +
Sbjct: 306 HKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTILGANGISLEYPVMR 364
>gi|398934185|ref|ZP_10666200.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM48]
gi|426407023|ref|YP_007027122.1| acyl-CoA dehydrogenase [Pseudomonas sp. UW4]
gi|398159300|gb|EJM47609.1| acyl-CoA dehydrogenase [Pseudomonas sp. GM48]
gi|426265240|gb|AFY17317.1| acyl-CoA dehydrogenase [Pseudomonas sp. UW4]
Length = 393
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ +R + ++ +AP + E + + + ++G + + G TI + YG
Sbjct: 15 LDQQLTEEERMIRDTAAQFAQQSLAPRILEAFRHEKTDPAIFREMGEVGLLGATIPEQYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I G+E QKQKYLP LA I
Sbjct: 75 GSGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP +GSD ++ T A KVEGG+ L G K WI NS ADV V++ ++ + I G
Sbjct: 135 GCFGLTEPNHGSDPGSMITRARKVEGGYSLTGSKMWITNSPIADVFVVWGKDDAGD-IRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G+I++ VFVP+E+ P V + L +R
Sbjct: 194 FVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITMALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K ++ + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSMMKRNSCGKSLDIARMARDMLGGNGISDEFGVAR 360
>gi|445432722|ref|ZP_21439395.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC021]
gi|444758060|gb|ELW82562.1| acyl-CoA dehydrogenase, N-terminal domain protein [Acinetobacter
baumannii OIFC021]
Length = 403
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI- 105
D + + L+ +E+ +R ++ + P + E + + ++G L + G TI
Sbjct: 15 DPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIP 74
Query: 106 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165
+ YG G + + EI VD+ + V SSL M+ I G+EEQKQKYLP LA
Sbjct: 75 EQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLAT 134
Query: 166 LNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN 225
I C+ LTEP +GSD ++ T A KV+GG+ L G K WI NS ADV V++A+ +
Sbjct: 135 GEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLSGAKMWITNSPIADVFVVWAKEISAE 194
Query: 226 ----QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++++K GL+ I K+GLR G+I++ VFVP+E+ P + +
Sbjct: 195 GNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPF 254
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R +AW +G + + H+Y +RKQFG PLAA Q+ Q+KL M I +
Sbjct: 255 TCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGL 314
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
R ++ ++G + SL K +A + + R+++GGNGI +F VA+
Sbjct: 315 QAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVAR 369
>gi|363423744|ref|ZP_09311804.1| glutaryl-CoA dehydrogenase [Rhodococcus pyridinivorans AK37]
gi|359731471|gb|EHK80521.1| glutaryl-CoA dehydrogenase [Rhodococcus pyridinivorans AK37]
Length = 395
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 185/358 (51%), Gaps = 10/358 (2%)
Query: 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPK-LGALRVAGGT 104
+ + D LL EE +R VR+ + I P +A+++E+A+ P + K LG L V G
Sbjct: 8 TQLFALDSLLEQEEIDIRDTVRKFGNERIRPHVAQWFEEAKLPARELAKELGQLGVLGMH 67
Query: 105 IKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 164
+ GYGC G S T +A E+ VD+ + + V SLAM +I GSEEQKQ++LP +A
Sbjct: 68 LDGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMFSIHHWGSEEQKQEWLPRMA 127
Query: 165 QLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---N 221
I C+ LTEP +GS+ + + T A + WIL G K WI N + ADV V++A+
Sbjct: 128 AGEAIGCFGLTEPDFGSNPAGMRTNAKRDGDDWILNGTKMWITNGSIADVAVVWAQTDLE 187
Query: 222 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I G++V D PG + +I +K+ LR +++L V +P +P +
Sbjct: 188 EGAKGIRGFVVPTDTPGFSAPEIHSKMSLRASVTSELILDGVRLPSSAMMPKAEGLRGPL 247
Query: 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMI 341
L +R + + IG + + Y + R+ F PLA +Q+ Q K+ M +
Sbjct: 248 TSLGEARFGIVFGAIGAARDCLETAVEYSQSREVFDKPLAGYQLTQAKIADMALEVGKGH 307
Query: 342 LVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE---LLGGNGILSDFLVAK 396
L+ + L ++ ++G + P SLGK RE +A+ RE +LG NGI ++ V +
Sbjct: 308 LLAYHLGRIKDRGEIAPEQVSLGK---LNNVREAIAIARECRTILGANGITLEYPVIR 362
>gi|333898418|ref|YP_004472291.1| glutaryl-CoA dehydrogenase [Pseudomonas fulva 12-X]
gi|333113683|gb|AEF20197.1| Glutaryl-CoA dehydrogenase [Pseudomonas fulva 12-X]
Length = 393
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 184/347 (53%), Gaps = 2/347 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
D LT EE+ VR + ++AP + E + + + ++G + G TI + YG
Sbjct: 15 LDQQLTEEERMVRDSAEQFAADKLAPRVLEAFRHEKTDPALFREMGETGLLGATIPEAYG 74
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G + + E+ R+D+ + + V SSL M+ I GSE KQKYLP LA I
Sbjct: 75 GSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGSEATKQKYLPKLATGEYI 134
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
C+ LTEP YGSD ++ T A KV+GG+ L G K WI NS ADV V++A++ +I G
Sbjct: 135 GCFGLTEPNYGSDPGSMITRAKKVDGGYRLTGNKMWITNSPIADVFVVWAKD-DAGEIRG 193
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRV 289
++++K GL+ I K+GLR G++++ VF P+E+ P V + L +R
Sbjct: 194 FVLEKGWEGLSAPAIHGKVGLRASITGEVVMDNVFCPEENAFPDVRGLRGPFTCLNSARY 253
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
++W +G + + +Y +R+QFG PLAA Q+ Q+KL M I + RL +
Sbjct: 254 GISWGALGAAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGR 313
Query: 350 LYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 396
+ ++G S+ K +A + + R++LGGNGI +F VA+
Sbjct: 314 MKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR 360
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,471,014,800
Number of Sequences: 23463169
Number of extensions: 255170935
Number of successful extensions: 639546
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19810
Number of HSP's successfully gapped in prelim test: 8446
Number of HSP's that attempted gapping in prelim test: 576929
Number of HSP's gapped (non-prelim): 30004
length of query: 422
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 277
effective length of database: 8,957,035,862
effective search space: 2481098933774
effective search space used: 2481098933774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)