Query 014583
Match_columns 422
No_of_seqs 224 out of 1576
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 14:11:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix5_A Acyl-coenzyme A oxidase 100.0 4.9E-72 1.7E-76 560.7 42.5 385 35-419 35-419 (436)
2 3sf6_A Glutaryl-COA dehydrogen 100.0 9.8E-70 3.3E-74 540.1 39.1 371 47-419 22-393 (403)
3 2d29_A Acyl-COA dehydrogenase; 100.0 5.6E-69 1.9E-73 532.1 41.9 370 50-419 2-380 (387)
4 3swo_A Glutaryl-COA dehydrogen 100.0 2.5E-69 8.7E-74 536.5 38.4 372 46-419 17-388 (399)
5 3ii9_A Glutaryl-COA dehydrogen 100.0 8.9E-70 3E-74 539.3 33.9 375 46-420 10-387 (396)
6 3p4t_A Putative acyl-COA dehyd 100.0 5.4E-69 1.9E-73 534.7 39.3 375 46-420 17-397 (403)
7 2eba_A Putative glutaryl-COA d 100.0 9E-69 3.1E-73 530.3 40.4 373 47-420 3-377 (385)
8 1ukw_A Acyl-COA dehydrogenase; 100.0 1.2E-68 4E-73 528.3 41.0 369 51-420 1-374 (379)
9 2jif_A Short/branched chain sp 100.0 1.2E-68 4.2E-73 532.0 40.9 373 47-420 21-398 (404)
10 3pfd_A Acyl-COA dehydrogenase; 100.0 6.2E-69 2.1E-73 532.7 36.4 373 47-420 11-389 (393)
11 1buc_A Butyryl-COA dehydrogena 100.0 2.1E-68 7.3E-73 527.3 39.8 370 51-420 1-379 (383)
12 2dvl_A Acyl-COA dehydrogenase; 100.0 2.5E-68 8.7E-73 524.7 40.1 365 54-420 2-368 (372)
13 2vig_A Short-chain specific ac 100.0 2.9E-68 1E-72 527.5 39.8 370 51-420 2-376 (391)
14 3r7k_A Probable acyl COA dehyd 100.0 1.7E-68 5.9E-73 531.1 38.2 371 50-420 24-399 (403)
15 3nf4_A Acyl-COA dehydrogenase; 100.0 5E-68 1.7E-72 525.4 40.8 368 52-420 13-383 (387)
16 2pg0_A Acyl-COA dehydrogenase; 100.0 1.1E-67 3.7E-72 522.5 42.2 367 53-421 8-382 (385)
17 1egd_A Medium chain acyl-COA d 100.0 4.1E-68 1.4E-72 527.3 39.1 370 50-420 11-388 (396)
18 1siq_A GCD, glutaryl-COA dehyd 100.0 1.1E-67 3.6E-72 523.8 39.1 373 47-420 6-380 (392)
19 1ivh_A Isovaleryl-COA dehydrog 100.0 1E-67 3.5E-72 524.2 37.9 368 53-420 11-387 (394)
20 1rx0_A Acyl-COA dehydrogenase 100.0 5.9E-67 2E-71 518.4 41.0 368 51-419 15-387 (393)
21 4hr3_A Putative acyl-COA dehyd 100.0 5.1E-67 1.7E-71 522.7 33.7 373 48-420 2-406 (415)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 7E-67 2.4E-71 518.8 33.9 367 51-419 1-378 (397)
23 1r2j_A Protein FKBI; polyketid 100.0 1.2E-66 4.3E-71 511.4 33.7 354 64-420 2-359 (366)
24 3owa_A Acyl-COA dehydrogenase; 100.0 3.1E-66 1E-70 535.2 36.0 367 51-419 29-419 (597)
25 2z1q_A Acyl-COA dehydrogenase; 100.0 2.5E-65 8.6E-70 528.5 37.0 364 55-420 28-410 (577)
26 2uxw_A VERY-long-chain specifi 100.0 8.6E-64 2.9E-68 518.3 37.4 366 51-418 42-424 (607)
27 3mkh_A Nitroalkane oxidase; ox 100.0 2.1E-64 7.3E-69 507.2 31.0 369 50-420 2-412 (438)
28 2wbi_A Acyl-COA dehydrogenase 100.0 3.3E-64 1.1E-68 503.9 30.0 372 47-420 15-414 (428)
29 2c12_A Nitroalkane oxidase; ox 100.0 3.2E-63 1.1E-67 498.7 34.2 368 51-419 2-414 (439)
30 3mxl_A Nitrososynthase; flavin 100.0 6.7E-60 2.3E-64 468.5 29.6 360 50-420 4-389 (395)
31 3m9v_A FAD-dependent oxidoredu 100.0 2.6E-59 8.7E-64 470.4 32.3 361 47-418 12-398 (439)
32 2or0_A Hydroxylase; APC7385, r 100.0 2.9E-59 1E-63 466.5 28.1 352 52-420 15-397 (414)
33 2rfq_A 3-HSA hydroxylase, oxyg 100.0 7.2E-58 2.5E-62 453.7 33.1 344 60-420 10-382 (394)
34 2jbr_A P-hydroxyphenylacetate 100.0 1.5E-57 5.2E-62 455.1 28.7 343 61-420 39-410 (422)
35 1w07_A Acyl-COA oxidase; oxido 100.0 1.3E-55 4.4E-60 461.6 28.4 366 46-420 16-436 (659)
36 2ddh_A Acyl-COA oxidase; beta 100.0 3.5E-53 1.2E-57 442.5 29.2 364 46-420 14-433 (661)
37 3djl_A Protein AIDB; alpha hel 100.0 5.9E-52 2E-56 423.5 28.7 321 89-421 89-438 (541)
38 1u8v_A Gamma-aminobutyrate met 100.0 5.6E-40 1.9E-44 331.3 24.2 248 146-401 119-404 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 8.6E-40 2.9E-44 329.5 22.9 289 84-402 73-396 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 2.4E-34 8.3E-39 289.5 22.5 234 150-390 127-391 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 3.6E-28 1.2E-32 245.0 21.8 241 154-401 134-401 (517)
42 3owa_A Acyl-COA dehydrogenase; 94.6 0.19 6.6E-06 51.4 11.3 88 316-405 482-571 (597)
43 2uxw_A VERY-long-chain specifi 89.9 2.7 9.2E-05 43.0 12.4 70 316-385 506-576 (607)
44 2z1q_A Acyl-COA dehydrogenase; 73.3 28 0.00095 35.1 12.0 72 316-395 468-539 (577)
No 1
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=4.9e-72 Score=560.68 Aligned_cols=385 Identities=80% Similarity=1.257 Sum_probs=360.2
Q ss_pred CCCCCCCCCCCCCcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccccccCCCCCC
Q 014583 35 ATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHS 114 (422)
Q Consensus 35 ~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~ 114 (422)
.++.+.+|+.+.|++.|++.+++++.++++.+++|+++++.|...+.++++.+|.+.|++|+++||+++.+++|||.|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~pe~GG~G~~ 114 (436)
T 2ix5_A 35 ATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLS 114 (436)
T ss_dssp SCCTTSCCCCCSCTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCCSTTCCCCC
T ss_pred cCCCCCCCCcccchhhcCCCCCHHHHHHHHHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCCCCCCCCCC
Confidence 34557778888889999989999999999999999999999988888888899999999999999999977799999999
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEEC
Q 014583 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVE 194 (422)
Q Consensus 115 ~~~~~~~~e~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~ 194 (422)
+.+...+.|+++++|+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|++++
T Consensus 115 ~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~g 194 (436)
T 2ix5_A 115 ITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVE 194 (436)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEET
T ss_pred HHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeC
Confidence 99999999999999999988888887778888999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeEeeecCCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC
Q 014583 195 GGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274 (422)
Q Consensus 195 ~~~~LnG~K~~is~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~ 274 (422)
|||+|||+|.||||+..||+++|+|++++++++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|+..
T Consensus 195 dg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~ 274 (436)
T 2ix5_A 195 GGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV 274 (436)
T ss_dssp TEEEEEEEEEEEETTTTCSEEEEEEEETTTSSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC
T ss_pred CEEEEeeeccCCCCCcccCEEEEEEEECCCCcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc
Confidence 99999999999999999999999999975567899999999999999999999999999999999999999999999887
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 014583 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354 (422)
Q Consensus 275 ~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~ 354 (422)
+++......+..+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++++++.++.+
T Consensus 275 ~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g 354 (436)
T 2ix5_A 275 NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETG 354 (436)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 78888888899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 355 AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 355 ~~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
.....+++++|+++++.+.++++.++|+|||+||+.+++++|+|||++...+++++++++...+.
T Consensus 355 ~~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~ia 419 (436)
T 2ix5_A 355 QMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTG 419 (436)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCChHHHHHHHhhcceeecCHHHHHHHHHH
Confidence 76677889999999999999999999999999999999999999999999988666555554443
No 2
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.8e-70 Score=540.05 Aligned_cols=371 Identities=32% Similarity=0.535 Sum_probs=352.5
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCC-HHHHHHHHhcccccccccccCCCCCCHHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP-FHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~e~l 125 (422)
|...|++.+++++.++++.+++|+++++.|.+.+.++.+.+| .++|++|+++||+++.+++|||.|+++.+...++|++
T Consensus 22 ~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eel 101 (403)
T 3sf6_A 22 DLIGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVAYGLACLEL 101 (403)
T ss_dssp HHHTCGGGSCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHHHHHHHHHH
T ss_pred chhccCCCCCHHHHHHHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999 9999999999999995599999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeee
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~ 205 (422)
++.|+++++.+.+|.+++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|++++|||+|||+|.|
T Consensus 102 a~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 181 (403)
T 3sf6_A 102 EAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMW 181 (403)
T ss_dssp HHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEe
Confidence 99999999988888877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCCCCHHHHHHHhH
Q 014583 206 IGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~~~~~~~~~~l~ 285 (422)
|||+..||+++|+|+++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||...++......+.
T Consensus 182 is~a~~Ad~~~v~ar~~--~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~ 259 (403)
T 3sf6_A 182 ITNGSVADVAVVWARTD--EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRCLN 259 (403)
T ss_dssp EETGGGCSEEEEEEEET--TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHH
T ss_pred ecCCcccCEEEEEEEeC--CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCCChhHHHHHHHHH
Confidence 99999999999999997 5799999999999999999999999999999999999999999999998778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHH
Q 014583 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365 (422)
Q Consensus 286 ~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K 365 (422)
.+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++|
T Consensus 260 ~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK 339 (403)
T 3sf6_A 260 EARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGK 339 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 366 SWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 366 ~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
.++++.+.++++.++|+|||+||+.+++++|+|||++...+++++++++...+.
T Consensus 340 ~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia 393 (403)
T 3sf6_A 340 LNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIG 393 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988666665554443
No 3
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=5.6e-69 Score=532.06 Aligned_cols=370 Identities=31% Similarity=0.427 Sum_probs=346.8
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhc
Q 014583 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARV 128 (422)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~ 128 (422)
.|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+...+.|++++.
T Consensus 2 ~m~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 81 (387)
T 2d29_A 2 GLWFEEGAEERQVLGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY 81 (387)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhh
Confidence 46778999999999999999998899998888999999999999999999999977 89999999999999999999999
Q ss_pred CchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCC
Q 014583 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208 (422)
Q Consensus 129 d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~ 208 (422)
|+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.++.|+|++++|||+|||+|.|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 161 (387)
T 2d29_A 82 DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ 161 (387)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCC
Confidence 99999888888656778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccEEEEEEEecCC-------CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHH
Q 014583 209 STFADVLVIFARNTTT-------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDT 280 (422)
Q Consensus 209 a~~ad~~~v~a~~~~~-------~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~ 280 (422)
+..||+++|+|+++++ .++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++||.. .++...
T Consensus 162 ~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~ 241 (387)
T 2d29_A 162 GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDV 241 (387)
T ss_dssp TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHH
T ss_pred CCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHH
Confidence 9999999999998632 37899999999999999999999999999999999999999999999875 567778
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhh
Q 014583 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360 (422)
Q Consensus 281 ~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~ 360 (422)
...+..+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....
T Consensus 242 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~ 321 (387)
T 2d29_A 242 LRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLE 321 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999987666778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 361 ~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
++++|+++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.
T Consensus 322 ~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia 380 (387)
T 2d29_A 322 AAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIA 380 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999988776665555444
No 4
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.5e-69 Score=536.53 Aligned_cols=372 Identities=28% Similarity=0.505 Sum_probs=353.1
Q ss_pred CCcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccccccCCCCCCHHHHHHHHHHH
Q 014583 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~e~l 125 (422)
.|.++|++.+++++.++++.+++|+++++.|.+.+.++++.+|.++|++|++.||+++.+++|||.|+++.+.+.++|++
T Consensus 17 ~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eel 96 (399)
T 3swo_A 17 LELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMEL 96 (399)
T ss_dssp HHHHTGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTSCSTTCCCCCHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCChhhhCCCCCCHHHHHHHHHHH
Confidence 46778999999999999999999999999999989999999999999999999999995599999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeee
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~ 205 (422)
+++|+++++.+.+|.+++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|++++|||+|||+|.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 176 (399)
T 3swo_A 97 EAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMW 176 (399)
T ss_dssp HHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEe
Confidence 99999998888888777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCCCCHHHHHHHhH
Q 014583 206 IGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLA 285 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~~~~~~~~~~l~ 285 (422)
+||+..||+++|+|+++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||...++......+.
T Consensus 177 vs~a~~Ad~~~v~a~~~--~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~ 254 (399)
T 3swo_A 177 ITNGNLADVATVWAQTD--DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLN 254 (399)
T ss_dssp EETTTTCSEEEEEEBCT--TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTTCCSTHHHHHHHH
T ss_pred ECCCCccCEEEEEEEeC--CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCCChhHHHHHHHHH
Confidence 99999999999999986 5699999999999999999999999999999999999999999999998778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHH
Q 014583 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365 (422)
Q Consensus 286 ~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K 365 (422)
.+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+......++++|
T Consensus 255 ~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK 334 (399)
T 3swo_A 255 EARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGK 334 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877888899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 366 SWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 366 ~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
.++++.+.++++.++|+|||+||+.+++++|+|||++...+++++++++...+.
T Consensus 335 ~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia 388 (399)
T 3swo_A 335 LNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIG 388 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988766665555444
No 5
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=8.9e-70 Score=539.28 Aligned_cols=375 Identities=33% Similarity=0.528 Sum_probs=348.2
Q ss_pred CCcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHH
Q 014583 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAE 124 (422)
Q Consensus 46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~ 124 (422)
.|++.|++.++++++++++.+++|+++++.|...+.++++.+|.++|++|++.||+++.+ ++|||.|+++.+...++|+
T Consensus 10 ~~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~ee 89 (396)
T 3ii9_A 10 DDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIARE 89 (396)
T ss_dssp TSTTCGGGGSCHHHHHHHHHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CcccccCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHH
Confidence 368889999999999999999999999899999999999999999999999999999977 9999999999999999999
Q ss_pred HHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEee
Q 014583 125 IARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKR 204 (422)
Q Consensus 125 la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~ 204 (422)
++++|+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.++.|+|++++|||+|||+|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 169 (396)
T 3ii9_A 90 VERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKM 169 (396)
T ss_dssp HHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEE
T ss_pred HHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEE
Confidence 99999999988888876667789999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcccEEEEEEEecCC--CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCCCCHHHHHH
Q 014583 205 WIGNSTFADVLVIFARNTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282 (422)
Q Consensus 205 ~is~a~~ad~~~v~a~~~~~--~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~~~~~~~~~ 282 (422)
|+||+..||+++|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|+..+++.....
T Consensus 170 ~vs~a~~Ad~~~v~a~~~~~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~~~g~~~~~~ 249 (396)
T 3ii9_A 170 WITNSPIADVFVVWAKLDEDGRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFT 249 (396)
T ss_dssp EEETGGGCSEEEEEEEEEETTEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHH
T ss_pred eECCCccCCEEEEEEEecCCCCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCCChHHHHHHH
Confidence 99999999999999998532 3589999999999999999999999999999999999999999999988788888889
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhh
Q 014583 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHAS 362 (422)
Q Consensus 283 ~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~ 362 (422)
.+...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.+|.+......++
T Consensus 250 ~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~ 329 (396)
T 3ii9_A 250 CLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITS 329 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 363 LGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 363 ~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
++|.++++.+.++++.++|+|||+||+.+++++|+|||++...+++++++++...+.+
T Consensus 330 ~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~ 387 (396)
T 3ii9_A 330 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGR 387 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997766665555543
No 6
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=5.4e-69 Score=534.71 Aligned_cols=375 Identities=21% Similarity=0.248 Sum_probs=350.5
Q ss_pred CCcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHH
Q 014583 46 SDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAE 124 (422)
Q Consensus 46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~ 124 (422)
.++..|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|++.||+++.+ ++|||.|+++.+...+.|+
T Consensus 17 ~~~~~M~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 96 (403)
T 3p4t_A 17 QGPGSMSIWTTAEREALRKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEE 96 (403)
T ss_dssp ------CTTSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHH
Confidence 367778899999999999999999999999999999999999999999999999999977 9999999999999999999
Q ss_pred HHhcCchh-hHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEe
Q 014583 125 IARVDASC-STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203 (422)
Q Consensus 125 la~~d~s~-~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K 203 (422)
+++.|+++ ++.+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|++++|||+|||+|
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K 176 (403)
T 3p4t_A 97 MHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAK 176 (403)
T ss_dssp HHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEE
T ss_pred HHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEE
Confidence 99999998 77788887778888999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCcccEEEEEEEecCC--CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHH
Q 014583 204 RWIGNSTFADVLVIFARNTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDT 280 (422)
Q Consensus 204 ~~is~a~~ad~~~v~a~~~~~--~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~ 280 (422)
.|+||+..||+++|+|+++++ +++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++||.. .++...
T Consensus 177 ~~vs~a~~Ad~~~v~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~ 256 (403)
T 3p4t_A 177 TYITSGVRADYVVTAARTGGPGAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQI 256 (403)
T ss_dssp EEEETTTTCSEEEEEEECSSSSGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHH
T ss_pred EEecCCcccCEEEEEEEeCCCCCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHH
Confidence 999999999999999999753 57899999999999999999999999999999999999999999999876 578888
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-hh
Q 014583 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT-PG 359 (422)
Q Consensus 281 ~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~-~~ 359 (422)
...+..+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+. ..
T Consensus 257 ~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~ 336 (403)
T 3p4t_A 257 AAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIA 336 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchh
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999987766 77
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 360 ~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
.++++|+++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 337 ~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~ 397 (403)
T 3p4t_A 337 EVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAK 397 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999998877777766654
No 7
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=9e-69 Score=530.26 Aligned_cols=373 Identities=33% Similarity=0.592 Sum_probs=346.3
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~l 125 (422)
|++.|++.+++++.++++.+++|+++++.|...+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+...+.|++
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 82 (385)
T 2eba_A 3 DFYALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYEL 82 (385)
T ss_dssp CTTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHH
Confidence 45667888999999999999999999899998888898999999999999999999977 99999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCc-CCCeeEEEEECCEEEEEeEee
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDA-SALNTTATKVEGGWILEGQKR 204 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~-~~~~t~a~~~~~~~~LnG~K~ 204 (422)
++.|+++++.+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+ .+++|+|++++|||+|||+|.
T Consensus 83 a~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~ 162 (385)
T 2eba_A 83 ERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKM 162 (385)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEE
T ss_pred HHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeee
Confidence 9999999988888877777889999999999999999999999999999999999999 899999999999999999999
Q ss_pred ecCCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCCCCHHHHHHHh
Q 014583 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284 (422)
Q Consensus 205 ~is~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~~~~~~~~~~l 284 (422)
|+||+..||+++|+|++++. .+++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|...+++......+
T Consensus 163 ~~s~~~~Ad~~~v~a~~~~g-~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l~~~~g~~~~~~~l 241 (385)
T 2eba_A 163 WITNGNLAHLAVIWAKDEGG-EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCL 241 (385)
T ss_dssp EEETTTTCSEEEEEEECC----EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHH
T ss_pred ccCCCcccCEEEEEEEeCCC-cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHccCCCchHHHHHHHH
Confidence 99999999999999998632 38899999999999999999999999999999999999999999995457888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHH
Q 014583 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364 (422)
Q Consensus 285 ~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~ 364 (422)
...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.+++++++++++++++.++.+......++++
T Consensus 242 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~a 321 (385)
T 2eba_A 242 TQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLA 321 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877777788999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 365 KSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 365 K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
|.++++.+.++++.|+|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 322 K~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~ 377 (385)
T 2eba_A 322 KRQNVWKALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGR 377 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887776666555543
No 8
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.2e-68 Score=528.32 Aligned_cols=369 Identities=29% Similarity=0.426 Sum_probs=346.8
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcC
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD 129 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d 129 (422)
|++.+++++.++++.+++|+++++.|...+.|+.+.+|.+.|++|.++||+++.+ ++|||.|+++.+...+.|++++.|
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~ 80 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYAC 80 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 4567899999999999999998899998888999999999999999999999977 899999999999999999999999
Q ss_pred chhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCC
Q 014583 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (422)
Q Consensus 130 ~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a 209 (422)
+++++.+.+|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||+
T Consensus 81 ~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 159 (379)
T 1ukw_A 81 MGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNG 159 (379)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred chHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCC
Confidence 99988888884 67788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhH
Q 014583 210 TFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLA 285 (422)
Q Consensus 210 ~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~ 285 (422)
..||+++|+|+++++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++......+.
T Consensus 160 ~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~ 239 (379)
T 1ukw_A 160 GEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLN 239 (379)
T ss_dssp TTEEEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHH
T ss_pred CcCCEEEEEEEcCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHH
Confidence 999999999998642 47899999999999999999999999999999999999999999999875 57778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHH
Q 014583 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365 (422)
Q Consensus 286 ~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K 365 (422)
.+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++|
T Consensus 240 ~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK 319 (379)
T 1ukw_A 240 KTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAK 319 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998776777899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 366 SWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 366 ~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
.++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 320 ~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~ 374 (379)
T 1ukw_A 320 AYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIAR 374 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998777766665544
No 9
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.2e-68 Score=531.98 Aligned_cols=373 Identities=29% Similarity=0.419 Sum_probs=347.7
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~l 125 (422)
++..|.+.+++++.++++.+++|+++++.|...+.|+.+.+|.+.|++|++.||+++.+ ++|||.|+++.+.+.+.|++
T Consensus 21 ~~~~~~~~~~~e~~~l~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 100 (404)
T 2jif_A 21 QSMAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEEL 100 (404)
T ss_dssp ---CCTTCCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHH
Confidence 45566677899999999999999999999988888899999999999999999999977 89999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeee
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~ 205 (422)
++.|+++++.+.+|.+++..+|..+|+++||++|||++.+|. ++|+++|||++|||+..++|+|++++|+|+|||+|.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~ 179 (404)
T 2jif_A 101 AKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMW 179 (404)
T ss_dssp HTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEe
Confidence 999999999888888777788999999999999999999986 8999999999999999999999999999999999999
Q ss_pred cCCCCcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHH
Q 014583 206 IGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTS 281 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~ 281 (422)
|||+..||+++|+|+++++ .++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++||.. .++....
T Consensus 180 is~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~ 259 (404)
T 2jif_A 180 ISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAI 259 (404)
T ss_dssp EETTTTCSEEEEEEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHH
T ss_pred ecCCcccCEEEEEEEeCCCCCCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHH
Confidence 9999999999999998532 46899999999999999999999999999999999999999999999875 5677788
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhh
Q 014583 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361 (422)
Q Consensus 282 ~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~ 361 (422)
..+..+|+.+++.++|+++++++.+++|+++|+|||+||.++|.+|++|++|.+++++++++++++++.++.+.+...++
T Consensus 260 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~ 339 (404)
T 2jif_A 260 GSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 339 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999877666778
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 362 ~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+++|+++++.+.++++.|+|+|||.||+.++|++|+|||++...+++++++++...+.+
T Consensus 340 ~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~ 398 (404)
T 2jif_A 340 SMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAK 398 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877777666654
No 10
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=6.2e-69 Score=532.73 Aligned_cols=373 Identities=29% Similarity=0.375 Sum_probs=339.5
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~l 125 (422)
+|.-|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+.+.+.|++
T Consensus 11 ~p~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel 90 (393)
T 3pfd_A 11 NPSFELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEV 90 (393)
T ss_dssp -----------CHHHHHHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHH
Confidence 45568888999999999999999999999999999999999999999999999999977 99999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeee
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~ 205 (422)
++.|+++++.+..|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++|||+|||+|.|
T Consensus 91 a~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~ 169 (393)
T 3pfd_A 91 ARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCW 169 (393)
T ss_dssp HTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEE
Confidence 999999998777775 5666788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHH
Q 014583 206 IGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTS 281 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~ 281 (422)
+||+..||+++|+|+++++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++....
T Consensus 170 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~ 249 (393)
T 3pfd_A 170 ITNGGKSTWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTAL 249 (393)
T ss_dssp EETTTTCSEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHH
T ss_pred ecCCcccCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHH
Confidence 9999999999999998643 57899999999999999999999999999999999999999999999885 6788888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-Chhh
Q 014583 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAM-TPGH 360 (422)
Q Consensus 282 ~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~-~~~~ 360 (422)
..+...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.. ....
T Consensus 250 ~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~ 329 (393)
T 3pfd_A 250 ATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFI 329 (393)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999999999998765 5677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 361 ASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 361 ~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
++++|+++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 330 ~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~ 389 (393)
T 3pfd_A 330 SAASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSR 389 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999887777776666554
No 11
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.1e-68 Score=527.31 Aligned_cols=370 Identities=27% Similarity=0.350 Sum_probs=348.4
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCC---CCHHHHHHHHHHHH
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG---HSVTGAAIAIAEIA 126 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g---~~~~~~~~~~e~la 126 (422)
|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|++.||+++.+ ++|||.| +++.+...+.|+++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~ 80 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELA 80 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHH
Confidence 5567899999999999999998899999889999999999999999999999977 8999999 99999999999999
Q ss_pred hcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE-CCEEEEEeEeee
Q 014583 127 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRW 205 (422)
Q Consensus 127 ~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~-~~~~~LnG~K~~ 205 (422)
++|+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|+++ +|+|+|||+|.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~ 160 (383)
T 1buc_A 81 KYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIF 160 (383)
T ss_dssp HHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEE
T ss_pred hhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEec
Confidence 9999999888888767778899999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCCCCcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHH
Q 014583 206 IGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTS 281 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~ 281 (422)
+||+..||+++|+|+++++ +++++|+||.+.|||++.+.|+++|+++++++.|.|+||+||++++|+.. .++....
T Consensus 161 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~ 240 (383)
T 1buc_A 161 ITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAM 240 (383)
T ss_dssp EETTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHH
T ss_pred cCCCCcCCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHH
Confidence 9999999999999998643 47899999999999999999999999999999999999999999999875 5677778
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhh
Q 014583 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361 (422)
Q Consensus 282 ~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~ 361 (422)
..+...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....+
T Consensus 241 ~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~ 320 (383)
T 1buc_A 241 MTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDA 320 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999877777789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 362 ~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+++|.++++.+.++++.++|+|||.||+.++|++|+|||++...+++++++++...+.+
T Consensus 321 ~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~ 379 (383)
T 1buc_A 321 AIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGG 379 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877777666654
No 12
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-68 Score=524.66 Aligned_cols=365 Identities=31% Similarity=0.431 Sum_probs=344.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCchh
Q 014583 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASC 132 (422)
Q Consensus 54 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~s~ 132 (422)
.+++++.++++.+++|+++++.|.+.+.|+.+.+|.+.|++|++.||+++.+ ++|||.|+++.+...+.|++++.|+++
T Consensus 2 ~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~ 81 (372)
T 2dvl_A 2 TLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSV 81 (372)
T ss_dssp -CCHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHH
Confidence 4689999999999999999899988888888999999999999999999977 899999999999999999999999999
Q ss_pred hHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCCcc
Q 014583 133 STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFA 212 (422)
Q Consensus 133 ~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~~a 212 (422)
++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|++++|||+|||+|.|+||+..|
T Consensus 82 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 161 (372)
T 2dvl_A 82 AVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHA 161 (372)
T ss_dssp HHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred HHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcC
Confidence 98888886567788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhHHHHHHH
Q 014583 213 DVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMV 291 (422)
Q Consensus 213 d~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~~~ 291 (422)
|+++|+|++++ ++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++||.. .++......+...|+.+
T Consensus 162 d~~~v~a~~~~--g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~ 239 (372)
T 2dvl_A 162 HLYVVMARTEK--GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGV 239 (372)
T ss_dssp SEEEEEEEETT--EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeCC--CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHH
Confidence 99999999964 7899999999999999999999999999999999999999999999875 56777788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHHHHHHHH
Q 014583 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITAR 371 (422)
Q Consensus 292 aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K~~~~~~ 371 (422)
++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++|.++++.
T Consensus 240 aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~ 319 (372)
T 2dvl_A 240 AAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAA 319 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998777777899999999999
Q ss_pred HHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 372 ARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 372 ~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 320 a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~ 368 (372)
T 2dvl_A 320 AVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIAR 368 (372)
T ss_dssp HHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988777777666554
No 13
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=2.9e-68 Score=527.51 Aligned_cols=370 Identities=28% Similarity=0.387 Sum_probs=344.3
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcC
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD 129 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d 129 (422)
|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|++.||+++.+ ++|||.|+++.+...+.|+++++|
T Consensus 2 ~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 81 (391)
T 2vig_A 2 QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGC 81 (391)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhc
Confidence 4556899999999999999999899999888999999999999999999999977 999999999999999999999999
Q ss_pred chhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCC
Q 014583 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (422)
Q Consensus 130 ~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a 209 (422)
+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.++.|+|++++|||+|||+|.||||+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 161 (391)
T 2vig_A 82 ASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNA 161 (391)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCC
Confidence 99998888886567788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhH
Q 014583 210 TFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLA 285 (422)
Q Consensus 210 ~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~ 285 (422)
..||+++|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++......+.
T Consensus 162 ~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~ 241 (391)
T 2vig_A 162 WEASAAVVFASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLD 241 (391)
T ss_dssp TTCSEEEEEEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHH
T ss_pred CcCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHH
Confidence 999999999998632 37899999999999999999999999999999999999999999999876 56777788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHH
Q 014583 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365 (422)
Q Consensus 286 ~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K 365 (422)
..|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++|
T Consensus 242 ~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK 321 (391)
T 2vig_A 242 MGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAK 321 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998766677899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 366 SWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 366 ~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
.++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 322 ~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~ 376 (391)
T 2vig_A 322 LAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAG 376 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997776666555543
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.7e-68 Score=531.07 Aligned_cols=371 Identities=20% Similarity=0.281 Sum_probs=349.9
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhc
Q 014583 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARV 128 (422)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~ 128 (422)
.++..+++++.++++.+++|+++++.|...+.|+.+.+|.++|++|++.||+++.+ ++|||.|+++.+...+.|++++.
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 103 (403)
T 3r7k_A 24 APEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAA 103 (403)
T ss_dssp -CGGGGCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhc
Confidence 34566899999999999999999999999999999999999999999999999977 99999999999999999999998
Q ss_pred -CchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecC
Q 014583 129 -DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIG 207 (422)
Q Consensus 129 -d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is 207 (422)
|+++++.+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|++++|||+|||+|.|+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs 183 (403)
T 3r7k_A 104 GGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFIT 183 (403)
T ss_dssp TCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEE
T ss_pred CCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEccc
Confidence 8998887776666788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccEEEEEEEecCC--CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHh
Q 014583 208 NSTFADVLVIFARNTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVL 284 (422)
Q Consensus 208 ~a~~ad~~~v~a~~~~~--~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l 284 (422)
|+..||+++|+|+++++ +++++|+||.+.|||++.+.|+++|++++++++|+|+||+||++++||.. .++......+
T Consensus 184 ~a~~Ad~~~v~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l 263 (403)
T 3r7k_A 184 SGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQF 263 (403)
T ss_dssp TTTTCSEEEEEEECSSSSGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTH
T ss_pred CCccCCEEEEEEEcCCCCCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHH
Confidence 99999999999999653 47899999999999999999999999999999999999999999999876 6788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHH
Q 014583 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364 (422)
Q Consensus 285 ~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~ 364 (422)
..+|+.+++.++|+++++++.+++|+++|+|||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++
T Consensus 264 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~a 343 (403)
T 3r7k_A 264 QAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMA 343 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887778889999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 365 KSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 365 K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
|.++++.+.++++.++|+|||+||+.+++++|+|||++...+++++++++...+.+
T Consensus 344 K~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~ 399 (403)
T 3r7k_A 344 KNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAK 399 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888877776655
No 15
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=5e-68 Score=525.37 Aligned_cols=368 Identities=25% Similarity=0.329 Sum_probs=341.9
Q ss_pred ccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCc
Q 014583 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDA 130 (422)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~ 130 (422)
++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.++|++|++.||+++.+ ++|||.|+++.+...++|++++.|+
T Consensus 13 ~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~ 92 (387)
T 3nf4_A 13 RLLPSQEAAELIELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWA 92 (387)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCc
Confidence 456899999999999999999999999999999999999999999999999977 9999999999999999999999999
Q ss_pred hhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCC
Q 014583 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210 (422)
Q Consensus 131 s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~ 210 (422)
++++.+.+|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||+.
T Consensus 93 ~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~ 171 (387)
T 3nf4_A 93 SVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGG 171 (387)
T ss_dssp HHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTT
T ss_pred hHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCc
Confidence 9999888887 677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEec-CCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhHHHH
Q 014583 211 FADVLVIFARNT-TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSR 288 (422)
Q Consensus 211 ~ad~~~v~a~~~-~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r 288 (422)
.||+++|+|+++ +.+++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++......+..+|
T Consensus 172 ~Ad~~~v~a~~~~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r 251 (387)
T 3nf4_A 172 KADFYTLFARTGEGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGR 251 (387)
T ss_dssp TCSEEEEEEECC--CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHH
T ss_pred ccCEEEEEEEeCCCCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHH
Confidence 999999999986 3367999999999999999999999999999999999999999999999876 57888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHHHHH
Q 014583 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWI 368 (422)
Q Consensus 289 ~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K~~~ 368 (422)
+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++.+++++++.++.+.+....++++|.++
T Consensus 252 ~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a 331 (387)
T 3nf4_A 252 LGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTA 331 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998877778899999999
Q ss_pred HHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 369 TARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 369 ~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 332 ~~~a~~~~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~ 383 (387)
T 3nf4_A 332 TDAAMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIAR 383 (387)
T ss_dssp HHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988877777766654
No 16
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.1e-67 Score=522.54 Aligned_cols=367 Identities=25% Similarity=0.335 Sum_probs=344.7
Q ss_pred cCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcC-c
Q 014583 53 DLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD-A 130 (422)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d-~ 130 (422)
+.+++++.++++.+++|+++++.|...+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+.+.+.|++++.| +
T Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~ 87 (385)
T 2pg0_A 8 RYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSS 87 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCc
Confidence 56899999999999999999999998889999999999999999999999977 899999999999999999999999 8
Q ss_pred hhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCC
Q 014583 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210 (422)
Q Consensus 131 s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~ 210 (422)
++++.+ |..++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||+.
T Consensus 88 ~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~ 165 (385)
T 2pg0_A 88 LVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGI 165 (385)
T ss_dssp GHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTT
T ss_pred hHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCc
Confidence 887655 665677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEecCC-----CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHh
Q 014583 211 FADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVL 284 (422)
Q Consensus 211 ~ad~~~v~a~~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l 284 (422)
+||+++|+|+++++ .++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++|+.. .++......+
T Consensus 166 ~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l 245 (385)
T 2pg0_A 166 HADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKL 245 (385)
T ss_dssp TCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHH
T ss_pred ccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHH
Confidence 99999999998633 26899999999999999999999999999999999999999999999875 6777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHH
Q 014583 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364 (422)
Q Consensus 285 ~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~ 364 (422)
...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....++++
T Consensus 246 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~a 325 (385)
T 2pg0_A 246 QQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMA 325 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877777789999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhhc
Q 014583 365 KSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLKL 421 (422)
Q Consensus 365 K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~l 421 (422)
|.++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+.
T Consensus 326 K~~a~e~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~ 382 (385)
T 2pg0_A 326 KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQ 382 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888777776653
No 17
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=4.1e-68 Score=527.34 Aligned_cols=370 Identities=25% Similarity=0.357 Sum_probs=346.6
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhc
Q 014583 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARV 128 (422)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~ 128 (422)
.|++.+++++.++++.+++|+++++.|...+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+.+.++|++++.
T Consensus 11 ~m~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 90 (396)
T 1egd_A 11 GFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYG 90 (396)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhh
Confidence 57778999999999999999999899988888999999999999999999999977 89999999999999999999999
Q ss_pred CchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCC
Q 014583 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGN 208 (422)
Q Consensus 129 d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~ 208 (422)
|+++++.+ +|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++|||+|||+|.|+||
T Consensus 91 ~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 169 (396)
T 1egd_A 91 CTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITN 169 (396)
T ss_dssp CHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred CccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccC
Confidence 99988876 77766777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccEEEEEEEecCC------CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHH
Q 014583 209 STFADVLVIFARNTTT------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTS 281 (422)
Q Consensus 209 a~~ad~~~v~a~~~~~------~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~ 281 (422)
+..||+++|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++....
T Consensus 170 ~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~ 249 (396)
T 1egd_A 170 GGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAM 249 (396)
T ss_dssp TTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHH
T ss_pred CcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHH
Confidence 9999999999998643 46889999999999999999999999999999999999999999999875 5677788
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhh
Q 014583 282 KVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHA 361 (422)
Q Consensus 282 ~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~ 361 (422)
..+..+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+......+
T Consensus 250 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~ 329 (396)
T 1egd_A 250 GAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYA 329 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999877667788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 362 SLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 362 ~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+++|.++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.+
T Consensus 330 ~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~ 388 (396)
T 1egd_A 330 SIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAR 388 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998777766665544
No 18
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=1.1e-67 Score=523.83 Aligned_cols=373 Identities=33% Similarity=0.494 Sum_probs=347.7
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIA 126 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~e~la 126 (422)
+++.|++.+++++.++++.+++|+++++.|...+.++.+.+|.+.|++|++.||+++.+++|||.|+++.+...+.|+++
T Consensus 6 ~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~eel~ 85 (392)
T 1siq_A 6 DPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELE 85 (392)
T ss_dssp STTCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHHHHH
Confidence 56678888999999999999999999899988888888899999999999999999955899999999999999999999
Q ss_pred hcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE--CCEEEEEeEee
Q 014583 127 RVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKR 204 (422)
Q Consensus 127 ~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~--~~~~~LnG~K~ 204 (422)
+.|+++++.+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|+|+|||+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~ 165 (392)
T 1siq_A 86 RVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKT 165 (392)
T ss_dssp TTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEE
T ss_pred HhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEE
Confidence 9999988877777666677888999999999999999999999999999999999999999999999 99999999999
Q ss_pred ecCCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCCCCHHHHHHHh
Q 014583 205 WIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284 (422)
Q Consensus 205 ~is~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~~~~~~~~~~l 284 (422)
|+||+..||+++|+|++++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|+...++......+
T Consensus 166 ~vs~~~~Ad~~~v~a~~~~-g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l 244 (392)
T 1siq_A 166 WITNSPMADLFVVWARCED-GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCL 244 (392)
T ss_dssp EEETGGGCSEEEEEEEETT-SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCCSSHHHHHHH
T ss_pred eecCCcccCEEEEEEEECC-CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcccCHHHHHHHH
Confidence 9999999999999999963 458999999999999999999999999999999999999999999998777787778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHH
Q 014583 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364 (422)
Q Consensus 285 ~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~ 364 (422)
...|+.+++.++|+++++++.+++|+++|+|||+||.++|.+|++|++|.+++++++.+++++++.++.+......++++
T Consensus 245 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~a 324 (392)
T 1siq_A 245 NNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLL 324 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999877667778999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 365 KSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 365 K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
|.++++.+.++++.++|+|||+||..++|++|+|||++...+|+++++++...+.+
T Consensus 325 K~~~~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~ 380 (392)
T 1siq_A 325 KRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGR 380 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887766666555543
No 19
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1e-67 Score=524.17 Aligned_cols=368 Identities=26% Similarity=0.371 Sum_probs=345.9
Q ss_pred cCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCH--HHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcC
Q 014583 53 DLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF--HVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD 129 (422)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d 129 (422)
+.+++++.++++.+++|+++++.|.+.+.|+.+.+|. +.|++|+++||+++.+ ++|||.|+++.+.+.+.|++++.|
T Consensus 11 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~ 90 (394)
T 1ivh_A 11 NGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRAS 90 (394)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhc
Confidence 4579999999999999999989998888999999999 9999999999999977 999999999999999999999999
Q ss_pred chhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCC
Q 014583 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (422)
Q Consensus 130 ~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a 209 (422)
+++++.+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+..+.|+|++++|||+|||+|.|+||+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~ 170 (394)
T 1ivh_A 91 GAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNG 170 (394)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETG
T ss_pred hhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCC
Confidence 99999888887667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEEEEecCC-----CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHH
Q 014583 210 TFADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKV 283 (422)
Q Consensus 210 ~~ad~~~v~a~~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~ 283 (422)
..||+++|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++||.. .++......
T Consensus 171 ~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~ 250 (394)
T 1ivh_A 171 PDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSG 250 (394)
T ss_dssp GGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHH
T ss_pred CcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHH
Confidence 999999999998643 36899999999999999999999999999999999999999999999875 677788888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhH
Q 014583 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASL 363 (422)
Q Consensus 284 l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~ 363 (422)
+...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.+....+++
T Consensus 251 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~ 330 (394)
T 1ivh_A 251 LDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAG 330 (394)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999987766778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 364 GKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 364 ~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+|.++++.+.++++.++|+|||.||..+++++|+|||++...+++++++++...+.+
T Consensus 331 aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~ 387 (394)
T 1ivh_A 331 VILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 387 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887776666655543
No 20
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.9e-67 Score=518.36 Aligned_cols=368 Identities=26% Similarity=0.341 Sum_probs=341.7
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcC
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD 129 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d 129 (422)
|++.+++++.++++.+++|+++++.|.+.+.|+.+.+|.+.|++|+++||+++.+ ++|||.|+++.+...+.|+++++|
T Consensus 15 ~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~ 94 (393)
T 1rx0_A 15 PSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGC 94 (393)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 3456899999999999999999999988888999999999999999999999977 899999999999999999999999
Q ss_pred chhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCC
Q 014583 130 ASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209 (422)
Q Consensus 130 ~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a 209 (422)
+++++.+.+|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+.++.|+|++++|+|+|||+|.||||+
T Consensus 95 ~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a 173 (393)
T 1rx0_A 95 TSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGA 173 (393)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred cchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCC
Confidence 99988888886 57778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEEEEecCC--CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhHH
Q 014583 210 TFADVLVIFARNTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAV 286 (422)
Q Consensus 210 ~~ad~~~v~a~~~~~--~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~ 286 (422)
..||+++|+|+++++ +++++|+||.+.|||++.+.++++|++++++++|.||||+||++++||.. .++......+..
T Consensus 174 ~~Ad~~~v~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~ 253 (393)
T 1rx0_A 174 GESDIYVVMCRTGGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNG 253 (393)
T ss_dssp TTCSEEEEEEESSSSSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHH
T ss_pred ccCCEEEEEEEcCCCCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHH
Confidence 999999999998643 47899999999999999999999999999999999999999999999875 567777788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhhhhHHH
Q 014583 287 SRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAM-TPGHASLGK 365 (422)
Q Consensus 287 ~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~-~~~~~~~~K 365 (422)
+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+.. ....++++|
T Consensus 254 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK 333 (393)
T 1rx0_A 254 GRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAK 333 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987643 355789999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 366 SWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 366 ~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
.++++.+.++++.++|+|||.||+.+++++|+|||++...+++++++++...+.
T Consensus 334 ~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia 387 (393)
T 1rx0_A 334 LFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILIS 387 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999988666665554443
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5.1e-67 Score=522.74 Aligned_cols=373 Identities=19% Similarity=0.186 Sum_probs=334.6
Q ss_pred cccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhC------------------CCCHHHHHHHHhcccccccc-ccc
Q 014583 48 YYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA------------------EFPFHVIPKLGALRVAGGTI-KGY 108 (422)
Q Consensus 48 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~Gl~~~~~-~~~ 108 (422)
|..|++.+++++.++++.+++|+++++.|...+.++.+ .+|.++|++|+++||+++.+ ++|
T Consensus 2 ~~~M~~~~~~~~~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~ 81 (415)
T 4hr3_A 2 PGSMDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPE 81 (415)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHH
Confidence 44578889999999999999999999888887776643 26789999999999999977 999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCchhhHHHH-HHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCC-CCCCcCCC
Q 014583 109 GCPGHSVTGAAIAIAEIARVDASCSTFIL-VHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASAL 186 (422)
Q Consensus 109 GG~g~~~~~~~~~~e~la~~d~s~~~~~~-~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~-~Gs~~~~~ 186 (422)
||.|+++.+.+.++|++++.|.+..+... .|...+...|..+|+++||++|||++.+|++++|+++|||+ +|||+..+
T Consensus 82 GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~ 161 (415)
T 4hr3_A 82 LGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNM 161 (415)
T ss_dssp TSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGC
T ss_pred CCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhC
Confidence 99999999999999999998855433221 22223446789999999999999999999999999999999 99999999
Q ss_pred eeEEEEECCEEEEEeEeeecCCCCc--ccEEEEEEEecCC----CCeEEEEEeCCCCCeeeecccCcccccccc--ceeE
Q 014583 187 NTTATKVEGGWILEGQKRWIGNSTF--ADVLVIFARNTTT----NQINGYLVKKDAPGLTVTKIENKIGLRIVQ--NGDI 258 (422)
Q Consensus 187 ~t~a~~~~~~~~LnG~K~~is~a~~--ad~~~v~a~~~~~----~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~--~~~l 258 (422)
.|+|++++|||+|||+|.||||+.+ ||+++|+|+++++ +++++|+||.+.|||++.+.|+++|+++++ +++|
T Consensus 162 ~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v 241 (415)
T 4hr3_A 162 AATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVV 241 (415)
T ss_dssp CCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEE
T ss_pred eeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEE
Confidence 9999999999999999999999966 9999999999643 579999999999999999999999999987 9999
Q ss_pred EEceeecCCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHH
Q 014583 259 LLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337 (422)
Q Consensus 259 ~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~ 337 (422)
.|+||+||++++||.. .++......+..+|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.+++
T Consensus 242 ~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~ 321 (415)
T 4hr3_A 242 SFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAI 321 (415)
T ss_dssp EEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHH
T ss_pred EEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHH
Confidence 9999999999999886 678888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc--CCCChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHH
Q 014583 338 QAMILVGWRLCKLYEK--GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIV 415 (422)
Q Consensus 338 ~a~~~~~~~~a~~~d~--~~~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~ 415 (422)
++++++++++++.++. +......++++|+++++.+.++++.++|+|||+||+.+++++|+|||++...+|+++++++.
T Consensus 322 ~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~ 401 (415)
T 4hr3_A 322 NQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHR 401 (415)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHH
Confidence 9999999999999987 44566788999999999999999999999999999999999999999999999987777666
Q ss_pred HHHhh
Q 014583 416 SNYLK 420 (422)
Q Consensus 416 ~~~~~ 420 (422)
..+.+
T Consensus 402 ~~ia~ 406 (415)
T 4hr3_A 402 GVVAR 406 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=7e-67 Score=518.84 Aligned_cols=367 Identities=26% Similarity=0.398 Sum_probs=345.9
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCC-HHHHHHHHhcccccccc-cccCCCCC--CHHHHHHHHHHHH
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP-FHVIPKLGALRVAGGTI-KGYGCPGH--SVTGAAIAIAEIA 126 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gl~~~~~-~~~GG~g~--~~~~~~~~~e~la 126 (422)
|++.+++++.++++.+++|+++++.|.+.+.|+.+.+| .++|++|+++||+++.+ ++|||.|+ +..+...+.|+++
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela 80 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIA 80 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999 99999999999999977 99999999 9999999999999
Q ss_pred hcCchhhHHHHHHhhHHHH-HHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeee
Q 014583 127 RVDASCSTFILVHSSLAML-TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRW 205 (422)
Q Consensus 127 ~~d~s~~~~~~~h~~~~~~-~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~ 205 (422)
+.|+++++.+.+|. ++.. .+..+|+++||++|||++.+|++++|+++|||++|||+.++.|+|++++|||+|||+|.|
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~ 159 (397)
T 3mpi_A 81 RGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTW 159 (397)
T ss_dssp HHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEE
T ss_pred hhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEe
Confidence 99999999888885 5555 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccEEEEEEEecCC---CCeEEEEE-eCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHH
Q 014583 206 IGNSTFADVLVIFARNTTT---NQINGYLV-KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDT 280 (422)
Q Consensus 206 is~a~~ad~~~v~a~~~~~---~~~~~flV-~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~ 280 (422)
+||+..||+++|+|+++++ .++++|+| |.+.|||++ +.|+++|++++++++|.|+||+||++++|+.. .++...
T Consensus 160 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~ 238 (397)
T 3mpi_A 160 ISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIV 238 (397)
T ss_dssp EETTTTCSSEEEEEESCGGGGGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHH
T ss_pred eCCCcccCEEEEEEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHH
Confidence 9999999999999998642 47899999 999999999 99999999999999999999999999999886 577888
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChh
Q 014583 281 SKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-AMTPG 359 (422)
Q Consensus 281 ~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~-~~~~~ 359 (422)
...+...|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+ .....
T Consensus 239 ~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~ 318 (397)
T 3mpi_A 239 FGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGL 318 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999987 56667
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 360 HASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 360 ~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
.++++|.++++.+.++++.++|+|||+||+.++|++|+|||+++..+++++++++...+.
T Consensus 319 ~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia 378 (397)
T 3mpi_A 319 DVAMAKYAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIA 378 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999988877777766665
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.2e-66 Score=511.41 Aligned_cols=354 Identities=21% Similarity=0.241 Sum_probs=322.5
Q ss_pred HHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCchhhHHHHHHhhH
Q 014583 64 MKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 142 (422)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~s~~~~~~~h~~~ 142 (422)
+.+++|+++++.|.+.+.|+.+.+|.+.|++|++.||+++.+ ++|||.|+++.+...+.|++++.|+++++.+.+|..+
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~ 81 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMA 81 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 457889999999998889999999999999999999999977 8999999999999999999999999999888888756
Q ss_pred HHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCCcccEEEEEEEec
Q 014583 143 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 222 (422)
Q Consensus 143 ~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~~ad~~~v~a~~~ 222 (422)
+...|. +|+++||++|||++.+|+ ++|+++|||++|||+.++.|+|++++|||+|||+|.|+||+..||+++|+|+++
T Consensus 82 ~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~ 159 (366)
T 1r2j_A 82 AWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQE 159 (366)
T ss_dssp HHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCS
T ss_pred HHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeC
Confidence 777888 999999999999999999 999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHH-HHHhHHHHHHHHHHHHHHHH
Q 014583 223 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDT-SKVLAVSRVMVAWQPIGISM 300 (422)
Q Consensus 223 ~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~-~~~l~~~r~~~aa~~~G~a~ 300 (422)
+ +++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++||.. .++... ...+...|+.+++.++|+++
T Consensus 160 ~-~g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~ 238 (366)
T 1r2j_A 160 D-GSGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILR 238 (366)
T ss_dssp S-SCCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4 38899999999999999999999999999999999999999999999875 567777 77888999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChhhhhHHHHHHHHHHHHHHHHH
Q 014583 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-AMTPGHASLGKSWITARARETVALG 379 (422)
Q Consensus 301 ~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~-~~~~~~~~~~K~~~~~~~~~v~~~~ 379 (422)
++++.+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+ .+...+++++|.++++.+.++++.+
T Consensus 239 ~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a 318 (366)
T 1r2j_A 239 ACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATA 318 (366)
T ss_dssp HHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988876 5566678999999999999999999
Q ss_pred HHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 380 RELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 380 ~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+|+|||.||+.+++++|+|||++...+|+++++++...+.+
T Consensus 319 ~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~ 359 (366)
T 1r2j_A 319 AQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQ 359 (366)
T ss_dssp HHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred HHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHH
Confidence 99999999999999999999999999887766666555543
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.1e-66 Score=535.24 Aligned_cols=367 Identities=25% Similarity=0.391 Sum_probs=336.4
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhC-CCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhc
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARV 128 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~ 128 (422)
.+..++++++++++.+++|+++++.|...+.++.+ .+|.++|++|+++||+++.+ ++|||.|+++.+...+.|++++.
T Consensus 29 ~p~~lt~eq~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~ 108 (597)
T 3owa_A 29 TPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRA 108 (597)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGG
T ss_pred CccCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHcc
Confidence 34568999999999999999999999888877765 68899999999999999977 99999999999999999999998
Q ss_pred CchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE--CCEEEEEeEeeec
Q 014583 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKRWI 206 (422)
Q Consensus 129 d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~--~~~~~LnG~K~~i 206 (422)
+ +.+..+..|.+++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|+|+|||+|.||
T Consensus 109 ~-~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~i 187 (597)
T 3owa_A 109 G-GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWI 187 (597)
T ss_dssp T-HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEE
T ss_pred c-hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEe
Confidence 6 455566777766667788999999999999999999999999999999999999999999994 5679999999999
Q ss_pred CCCCcccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhH
Q 014583 207 GNSTFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLA 285 (422)
Q Consensus 207 s~a~~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~ 285 (422)
||+.+||+++|+|++++ +++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++||.. +++......++
T Consensus 188 s~a~~Ad~~lV~Art~~-~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~ 266 (597)
T 3owa_A 188 TNSAFADVFIVYAKIDG-EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILN 266 (597)
T ss_dssp ETTTTCSEEEEEEEETT-TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHH
T ss_pred CCCccCCEEEEEEEeCC-CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhH
Confidence 99999999999999864 58999999999999999999999999999999999999999999999876 67888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----------
Q 014583 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGA---------- 355 (422)
Q Consensus 286 ~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~---------- 355 (422)
.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++++++.+|.+.
T Consensus 267 ~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~ 346 (597)
T 3owa_A 267 IGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKD 346 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999888642
Q ss_pred ---------CChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHh
Q 014583 356 ---------MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYL 419 (422)
Q Consensus 356 ---------~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~ 419 (422)
+...+++++|+++++.+.++++.++|+|||+||+.++|++|+|||++..++++|+++++...+.
T Consensus 347 ~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia 419 (597)
T 3owa_A 347 GKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVP 419 (597)
T ss_dssp CHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHH
Confidence 2244678999999999999999999999999999999999999999999988777766655443
No 25
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-65 Score=528.54 Aligned_cols=364 Identities=26% Similarity=0.366 Sum_probs=336.6
Q ss_pred CCHHHHHHHHHHHHHHHhhccccHHHHHHh-CCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCchh
Q 014583 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEK-AEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASC 132 (422)
Q Consensus 55 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~s~ 132 (422)
++++++++++.+++|+++++.|...+.+.. ..+|.++|++|+++||+++.+ ++|||.|++..+...+.|++ ..|+++
T Consensus 28 ~~~e~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~ 106 (577)
T 2z1q_A 28 FDESVKEIARTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGF 106 (577)
T ss_dssp CCHHHHHHHHHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTH
T ss_pred CCHHHHHHHHHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccH
Confidence 588999999999999999888875444322 378999999999999999977 99999999999999999999 779999
Q ss_pred hHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEE--ECCEEEEEeEeeecCCCC
Q 014583 133 STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATK--VEGGWILEGQKRWIGNST 210 (422)
Q Consensus 133 ~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~--~~~~~~LnG~K~~is~a~ 210 (422)
++.+.+|.+++..+|..+|+++||++|||++.+|++++|+++|||++|||+.++.|+|++ ++|+|+|||+|+||||++
T Consensus 107 ~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~ 186 (577)
T 2z1q_A 107 SVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAG 186 (577)
T ss_dssp HHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTT
T ss_pred HHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCC
Confidence 998999987777789999999999999999999999999999999999999999999999 456899999999999999
Q ss_pred cccEEEEEEEecCCCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhHHHHH
Q 014583 211 FADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRV 289 (422)
Q Consensus 211 ~ad~~~v~a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~ 289 (422)
.||+++|+|++++ +++++|+||++.|||++.+.|+++|+++++++.|.|+||+||.+++||.. .++......+..+|+
T Consensus 187 ~Ad~~~V~Ar~~g-~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~ 265 (577)
T 2z1q_A 187 FAHLFTVFAKVDG-EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRY 265 (577)
T ss_dssp TCSEEEEEEEETT-TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHH
T ss_pred ccCEEEEEEEeCC-CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHH
Confidence 9999999999964 68999999999999999999999999999999999999999999999875 788888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------C
Q 014583 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG--------------A 355 (422)
Q Consensus 290 ~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~--------------~ 355 (422)
.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.++++++++++++++..+|.+ .
T Consensus 266 ~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~ 345 (577)
T 2z1q_A 266 KLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIE 345 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999988764 2
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 356 MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 356 ~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
.....++++|+++++.+.++++.|+|+|||+||+.+++++|+|||++..++++|+++++...+.+
T Consensus 346 ~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~ 410 (577)
T 2z1q_A 346 EYAVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPG 410 (577)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHH
Confidence 33456889999999999999999999999999999999999999999999999988887776643
No 26
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=8.6e-64 Score=518.34 Aligned_cols=366 Identities=24% Similarity=0.320 Sum_probs=335.4
Q ss_pred CccCCCHHHHH----HHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHH
Q 014583 51 FDDLLTSEEQA----VRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEI 125 (422)
Q Consensus 51 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~l 125 (422)
++..+++++.+ +++.+++|+++.+.| .+.|+...+|.+.|++|++.||+++.+ ++|||.|++..+...+.|++
T Consensus 42 ~p~~l~~~~~~~~~~l~~~~~~~~~~~~~~--~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l 119 (607)
T 2uxw_A 42 YPSVLNEEQTQFLKELVEPVSRFFEEVNDP--AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIV 119 (607)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHTCCH--HHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhcCH--HHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHH
Confidence 44456777754 889999999997755 345677899999999999999999977 99999999999999999999
Q ss_pred HhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE--CCEEEEEeEe
Q 014583 126 ARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQK 203 (422)
Q Consensus 126 a~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~--~~~~~LnG~K 203 (422)
+++|+++++.+++|.+++...|..+|+++||++|||++.+|++++|+++|||++|||+..+.|+|+++ +++|+|||+|
T Consensus 120 ~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K 199 (607)
T 2uxw_A 120 GMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSK 199 (607)
T ss_dssp HHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEE
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEE
Confidence 99999999988888766677899999999999999999999999999999999999999999999996 4589999999
Q ss_pred eecCCCCcccEEEEEEEecC--------CCCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC-
Q 014583 204 RWIGNSTFADVLVIFARNTT--------TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV- 274 (422)
Q Consensus 204 ~~is~a~~ad~~~v~a~~~~--------~~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~- 274 (422)
+||||+..||+++|+|++++ .+++++|+||++.|||++.+.|+++|+++++++.|.|+||+||.+++||..
T Consensus 200 ~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g 279 (607)
T 2uxw_A 200 LWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVG 279 (607)
T ss_dssp EEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTT
T ss_pred EeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCC
Confidence 99999999999999999852 246899999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 014583 275 NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354 (422)
Q Consensus 275 ~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~ 354 (422)
.++......++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.++++++++++++++..+|.+
T Consensus 280 ~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~ 359 (607)
T 2uxw_A 280 SGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG 359 (607)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 67888888899999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C-CChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHH
Q 014583 355 A-MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNY 418 (422)
Q Consensus 355 ~-~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~ 418 (422)
. .....++++|.++++.+.++++.++|+|||+||+.+++++|+|||+++..+++++++++...+
T Consensus 360 ~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~i 424 (607)
T 2uxw_A 360 ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV 424 (607)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHH
Confidence 3 345678999999999999999999999999999999999999999999999988877665444
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.1e-64 Score=507.19 Aligned_cols=369 Identities=18% Similarity=0.219 Sum_probs=333.3
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhccccHHHHHH----hC-CCC--HHHHHHHHhcccccccc-cccCCCCCCHHHHHHH
Q 014583 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWE----KA-EFP--FHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIA 121 (422)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~--~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~ 121 (422)
.|++.++++++++++.+++|+++++.|...++++ .+ .|| .++|++|+++||+++.+ ++|||.|+++.+...+
T Consensus 2 ~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v 81 (438)
T 3mkh_A 2 AIDFHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAIL 81 (438)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHH
Confidence 4778899999999999999999999888766643 22 465 89999999999999977 9999999999999999
Q ss_pred HHHHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcC--cceeEEeecCCCCCC-----CcCCCeeEEEEEC
Q 014583 122 IAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL--NTIACWALTEPAYGS-----DASALNTTATKVE 194 (422)
Q Consensus 122 ~e~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g--~~~~~~a~tE~~~Gs-----~~~~~~t~a~~~~ 194 (422)
+|++++.|+++++.+..|. ++...+..+|+++ |++|||++.+| +.++|+++|||++|| |+.+++|+|++++
T Consensus 82 ~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g 159 (438)
T 3mkh_A 82 VEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEG 159 (438)
T ss_dssp HHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEET
T ss_pred HHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeC
Confidence 9999999999988776664 5667788899999 99999999996 589999999999998 5889999999999
Q ss_pred CEEEEEeEeeecCCCC-----cccEEEEEEEecC---------CCCeEEEEEeCCC-----CC-eeeecccCcccccccc
Q 014583 195 GGWILEGQKRWIGNST-----FADVLVIFARNTT---------TNQINGYLVKKDA-----PG-LTVTKIENKIGLRIVQ 254 (422)
Q Consensus 195 ~~~~LnG~K~~is~a~-----~ad~~~v~a~~~~---------~~~~~~flV~~~~-----~G-v~~~~~~~~~Gl~~~~ 254 (422)
|+|+|||+|.||||+. .||+++|+|+++. .+++++|+||++. || |++.+.|+++|+++++
T Consensus 160 ~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~ 239 (438)
T 3mkh_A 160 DEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVS 239 (438)
T ss_dssp TEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCC
T ss_pred CEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCC
Confidence 9999999999999997 7999999999853 1468999999875 98 9999999999999999
Q ss_pred ceeEEEceeecCCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-cccccchhhHHHHHH
Q 014583 255 NGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFG-APLAAFQINQQKLVQ 332 (422)
Q Consensus 255 ~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg-~~l~~~~~vq~~La~ 332 (422)
+++|.|+||+||++++||.. .++......+..+|+.+++.++|+++++++.+++|+++|++|| +||+++|.+|++|++
T Consensus 240 ~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~ 319 (438)
T 3mkh_A 240 GPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSG 319 (438)
T ss_dssp CCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHH
T ss_pred ceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHH
Confidence 99999999999999999876 6788888889999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCC----hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHH
Q 014583 333 MLGNIQAMILVGWRLCKLYEKGAMT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHF 408 (422)
Q Consensus 333 ~~~~~~a~~~~~~~~a~~~d~~~~~----~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~ 408 (422)
|.+++++++++++++++.++.+... ...++++|+++++.+.++++.++|+|||+||+.++|++|+|||+++..+++
T Consensus 320 ~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~ 399 (438)
T 3mkh_A 320 VKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFD 399 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeec
Confidence 9999999999999999999886543 223678999999999999999999999999999999999999999999998
Q ss_pred HHH-HHHHHHHhh
Q 014583 409 VCK-NLIVSNYLK 420 (422)
Q Consensus 409 ~~~-~~~~~~~~~ 420 (422)
+++ +++...+.+
T Consensus 400 Gt~~~v~~~~i~r 412 (438)
T 3mkh_A 400 GGNVGIRRRHLQQ 412 (438)
T ss_dssp SCTTTTHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 877 655555544
No 28
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-64 Score=503.95 Aligned_cols=372 Identities=19% Similarity=0.229 Sum_probs=322.8
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHH---HHHHh-----CC-----CCHHHHHHHHhcccccccccccCCCCC
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMA---EYWEK-----AE-----FPFHVIPKLGALRVAGGTIKGYGCPGH 113 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~-----~~~~~~~~l~~~Gl~~~~~~~~GG~g~ 113 (422)
+...|++.+++++.++++.+++|+++++.|... +.++. .. ++.++|++|++.||+++.+++ |.|+
T Consensus 15 ~~~~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~--G~g~ 92 (428)
T 2wbi_A 15 DTTGQLFVQTRKGQEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA--VSGL 92 (428)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH--HHCC
T ss_pred CCccCCCCCCHHHHHHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC--CCCC
Confidence 445577889999999999999999998877665 54432 23 347899999999999998855 7899
Q ss_pred CHHHHHHHHHHHHhcCch-hhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCC-CCCCcCCCeeEEE
Q 014583 114 SVTGAAIAIAEIARVDAS-CSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASALNTTAT 191 (422)
Q Consensus 114 ~~~~~~~~~e~la~~d~s-~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~-~Gs~~~~~~t~a~ 191 (422)
++.+...+.|+++++|.+ .++....|..++...|..+|+++||++|||++.+|++++|+++|||+ +|||+.++.|+|+
T Consensus 93 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~ 172 (428)
T 2wbi_A 93 SHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQ 172 (428)
T ss_dssp CHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEE
T ss_pred CHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEE
Confidence 999999999999998843 22222222224566788999999999999999999999999999999 9999999999999
Q ss_pred EECCEEEEEeEeeecCCCCc--ccEEEEEEEecCC-----CCeEEEEEeCCCCCeeeecccCcccccccc---ceeEEEc
Q 014583 192 KVEGGWILEGQKRWIGNSTF--ADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQ---NGDILLK 261 (422)
Q Consensus 192 ~~~~~~~LnG~K~~is~a~~--ad~~~v~a~~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~---~~~l~f~ 261 (422)
+++|||+|||+|+||||+.+ ||+++|+|+++++ +++++|+||.+.|||++.+.|+++|+++++ +++|.|+
T Consensus 173 ~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 252 (428)
T 2wbi_A 173 RDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFN 252 (428)
T ss_dssp EETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEE
T ss_pred EeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeC
Confidence 99999999999999999987 9999999998643 368999999999999999999999999995 9999999
Q ss_pred eeecCCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHH
Q 014583 262 KVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAM 340 (422)
Q Consensus 262 ~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~ 340 (422)
||+||++++||.. .++......+..+|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.++++++
T Consensus 253 dv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aa 332 (428)
T 2wbi_A 253 QVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKI 332 (428)
T ss_dssp EEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHH
T ss_pred ceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999875 677777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc-C-CCChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHH
Q 014583 341 ILVGWRLCKLYEK-G-AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNY 418 (422)
Q Consensus 341 ~~~~~~~a~~~d~-~-~~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~ 418 (422)
+++++++++.++. + ......++++|+++++.+.++++.++|+|||+||+.+++++|+|||++...+|+++++++...+
T Consensus 333 r~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~i 412 (428)
T 2wbi_A 333 RLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAI 412 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHH
Confidence 9999999998876 2 3455678999999999999999999999999999999999999999999999977776666555
Q ss_pred hh
Q 014583 419 LK 420 (422)
Q Consensus 419 ~~ 420 (422)
.+
T Consensus 413 a~ 414 (428)
T 2wbi_A 413 AT 414 (428)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 29
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=3.2e-63 Score=498.71 Aligned_cols=368 Identities=19% Similarity=0.219 Sum_probs=331.5
Q ss_pred CccCCCHHHHHHHHHHHHHHHhhccccHHHHHHh----CCCC--HHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHH
Q 014583 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK----AEFP--FHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIA 123 (422)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e 123 (422)
|++.+++++.++++.+++|+++++.|...++++. +.+| .++|++|+++||+++.+ ++|||.|+++.+.+.++|
T Consensus 2 M~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 81 (439)
T 2c12_A 2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILE 81 (439)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 5667899999999999999999999887666542 3565 89999999999999977 899999999999999999
Q ss_pred HHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhh--cCcceeEEeecCCCCCC-----CcCCCeeEEEEECCE
Q 014583 124 EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA--QLNTIACWALTEPAYGS-----DASALNTTATKVEGG 196 (422)
Q Consensus 124 ~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~--~g~~~~~~a~tE~~~Gs-----~~~~~~t~a~~~~~~ 196 (422)
++++.|+++++.+.+|. ++...|..+|+++||++|||++. +|++++|+++|||++|| |+.+++|+|++++||
T Consensus 82 ela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g 160 (439)
T 2c12_A 82 ELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNE 160 (439)
T ss_dssp HHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTE
T ss_pred HHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCE
Confidence 99999999998888775 56677899999999999999999 69999999999999998 578889999999999
Q ss_pred EEEEeEeeecCCCC-----cccEEEEEEEe-c----CC-------CCeEEEEEeCCCC------CeeeecccCccccccc
Q 014583 197 WILEGQKRWIGNST-----FADVLVIFARN-T----TT-------NQINGYLVKKDAP------GLTVTKIENKIGLRIV 253 (422)
Q Consensus 197 ~~LnG~K~~is~a~-----~ad~~~v~a~~-~----~~-------~~~~~flV~~~~~------Gv~~~~~~~~~Gl~~~ 253 (422)
|+|||+|.||||+. .||+++|+|++ + ++ .++++|+||.+.| |+++.+.|+++|++++
T Consensus 161 ~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~ 240 (439)
T 2c12_A 161 WVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITT 240 (439)
T ss_dssp EEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTC
T ss_pred EEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCC
Confidence 99999999999997 89999999998 5 21 3689999999988 8889999999999999
Q ss_pred cceeEEEceeecCCCCCCCCC-CCHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCcccccchhhHHHH
Q 014583 254 QNGDILLKKVFVPDEDRLPGV-NSFQ-DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKE-RKQFGAPLAAFQINQQKL 330 (422)
Q Consensus 254 ~~~~l~f~~v~Vp~~~~l~~~-~~~~-~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~-R~~fg~~l~~~~~vq~~L 330 (422)
++++|.|+||+||++++||.. .++. .....+...|+.+++.++|+++++++.+++|+++ |.+||+||.++|.+|++|
T Consensus 241 ~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~l 320 (439)
T 2c12_A 241 SGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKL 320 (439)
T ss_dssp CCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHH
T ss_pred CceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHH
Confidence 999999999999999999875 4666 7778889999999999999999999999999997 788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCC----hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhcccc
Q 014583 331 VQMLGNIQAMILVGWRLCKLYEKGAMT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLD 406 (422)
Q Consensus 331 a~~~~~~~a~~~~~~~~a~~~d~~~~~----~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~ 406 (422)
++|.+++++++++++++++.++.+... ...++++|.++++.+.++++.++|+|||.||..+++++|+|||++...+
T Consensus 321 a~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i 400 (439)
T 2c12_A 321 IDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPL 400 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhccee
Confidence 999999999999999999999876542 2357899999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHh
Q 014583 407 HFVCK-NLIVSNYL 419 (422)
Q Consensus 407 ~~~~~-~~~~~~~~ 419 (422)
+++++ ++....+.
T Consensus 401 ~~G~~~~~~~~~i~ 414 (439)
T 2c12_A 401 FDGGNIGLRRRQMQ 414 (439)
T ss_dssp SSSCTTTTHHHHHH
T ss_pred ecCChHHHHHHHHH
Confidence 87655 34444443
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=6.7e-60 Score=468.51 Aligned_cols=360 Identities=17% Similarity=0.161 Sum_probs=317.9
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCC-CCHHHHHHHHHHHHh
Q 014583 50 QFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG-HSVTGAAIAIAEIAR 127 (422)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g-~~~~~~~~~~e~la~ 127 (422)
++...+++++.++++.+++|+++ +.|.+.+.|+++.+|.++|++|++.||+++.+ ++|||.| .++.+.+.++|++++
T Consensus 4 ~~~~~lt~e~~~~~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~ 82 (395)
T 3mxl_A 4 DLRAPLTPAGRTVVDLLAGVIPR-ISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAE 82 (395)
T ss_dssp SSSSCCSHHHHHHHHHHTTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHHHH-HhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHh
Confidence 46677899999999999999985 88999999999999999999999999999977 9999999 899999999999999
Q ss_pred cCchhhHHHHHHhhHHHHHHH--hcCCHHHH---HhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeE
Q 014583 128 VDASCSTFILVHSSLAMLTIA--LCGSEEQK---QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 202 (422)
Q Consensus 128 ~d~s~~~~~~~h~~~~~~~i~--~~g~~~qk---~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~ 202 (422)
.|+++++.+.+|..++...+. .+|+++|| ++|||++.+|+.++|+++|||++|+ ..++| .++|||+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t---~~~~g~~lnG~ 157 (395)
T 3mxl_A 83 ADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHS---DGAGGWLLSGR 157 (395)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEE---CSSSCEEEEEE
T ss_pred hCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEE---ecCCEEEEeeE
Confidence 999999988888765555443 56999999 9999999999999999999998763 22222 27889999999
Q ss_pred eeecCCCCcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCC--C-CCC
Q 014583 203 KRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP--G-VNS 276 (422)
Q Consensus 203 K~~is~a~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~--~-~~~ 276 (422)
|.||||+..||+++|+|+++++ .++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++|+ . ..+
T Consensus 158 K~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g 237 (395)
T 3mxl_A 158 KVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGAR 237 (395)
T ss_dssp EEEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCC
T ss_pred EEEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCcc
Confidence 9999999999999999998653 357899999999999999999999999999999999999999999997 3 245
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Q 014583 277 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK--- 353 (422)
Q Consensus 277 ~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~--- 353 (422)
+......+...|+.+++.++|+++++++.+++|++ |+|+.++|.+|++|++|.+++++++++++++++.++.
T Consensus 238 ~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~ 312 (395)
T 3mxl_A 238 RDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASV 312 (395)
T ss_dssp CTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 54444445668999999999999999999999998 5689999999999999999999999999999998875
Q ss_pred ---CCCC------hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccc-cHHHHHHHHHHHHhh
Q 014583 354 ---GAMT------PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHL-DHFVCKNLIVSNYLK 420 (422)
Q Consensus 354 ---~~~~------~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~-~~~~~~~~~~~~~~~ 420 (422)
..+. ...++++|.++++.+.++++.++|+|||+||+.++|++|+|||++..+ +|+++++.+...+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~ 389 (395)
T 3mxl_A 313 DLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSG 389 (395)
T ss_dssp TCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHH
T ss_pred ccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHH
Confidence 1111 135678999999999999999999999999999999999999999999 998888777666554
No 31
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=2.6e-59 Score=470.39 Aligned_cols=361 Identities=19% Similarity=0.209 Sum_probs=314.7
Q ss_pred CcccCccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCC-CCHHHHHHHHHH
Q 014583 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG-HSVTGAAIAIAE 124 (422)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g-~~~~~~~~~~e~ 124 (422)
++..|++.+++++.++++.+++|+++ +.|.+.+.|+.+.+|.++|++|++.||+++.+ ++|||.| .++.+++.++|+
T Consensus 12 ~~~~m~~~lt~e~~~l~~~~r~~~~~-~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~ee 90 (439)
T 3m9v_A 12 STTGLYAPVTPAGRVLLDRLAAHLPR-IRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLA 90 (439)
T ss_dssp CCSTTSSCSSHHHHHHHHHHHTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHH-HhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHH
Confidence 45668899999999999999999985 88999999999999999999999999999977 9999999 899999999999
Q ss_pred HHhcCchhhHHHHHHhhHHHHHH--HhcCCHHH---HHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEE
Q 014583 125 IARVDASCSTFILVHSSLAMLTI--ALCGSEEQ---KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWIL 199 (422)
Q Consensus 125 la~~d~s~~~~~~~h~~~~~~~i--~~~g~~~q---k~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~L 199 (422)
+++.|+++++.+.+|.......+ ..+|+++| |++||+++.+|+.++|+++|||+++ ...+.|+ ++|+|+|
T Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t~---~~~g~vl 165 (439)
T 3m9v_A 91 VARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRPD---GAGGWLL 165 (439)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEEC---SSSCEEE
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceeec---cCCEEEE
Confidence 99999999988888876555443 46699999 9999999999999999999999853 3333333 7889999
Q ss_pred EeEeeecCCCCcccEEEEEEEecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCC--CC
Q 014583 200 EGQKRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP--GV 274 (422)
Q Consensus 200 nG~K~~is~a~~ad~~~v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~--~~ 274 (422)
||+|+|+||+.+||+++|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|+ ..
T Consensus 166 nG~K~~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~ 245 (439)
T 3m9v_A 166 SGRKTLVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPV 245 (439)
T ss_dssp EEEEEEETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC-
T ss_pred EeEEEeecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCC
Confidence 9999999999999999999999643 468999999999999999999999999999999999999999999998 32
Q ss_pred -CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 014583 275 -NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK 353 (422)
Q Consensus 275 -~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~ 353 (422)
.++.........+|+.+++.++|+++++++.+++|++ |+|+.++|.+|++|++|.++++++++++++++..++.
T Consensus 246 g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~ 320 (439)
T 3m9v_A 246 GARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADA 320 (439)
T ss_dssp -CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3443333345568999999999999999999999999 4589999999999999999999999999998877764
Q ss_pred ---C---------CCChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccc-cHHHHHHHHHHHH
Q 014583 354 ---G---------AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHL-DHFVCKNLIVSNY 418 (422)
Q Consensus 354 ---~---------~~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~-~~~~~~~~~~~~~ 418 (422)
. ......++++|+++++.+.++++.|+|+|||+||+.+++++|+|||+++.+ +|++.++.....+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i 398 (439)
T 3m9v_A 321 LSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFL 398 (439)
T ss_dssp HHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHH
T ss_pred hccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHH
Confidence 1 111234677899999999999999999999999999999999999999999 8866665544443
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=2.9e-59 Score=466.51 Aligned_cols=352 Identities=14% Similarity=0.063 Sum_probs=310.8
Q ss_pred ccCCCHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCc
Q 014583 52 DDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDA 130 (422)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~ 130 (422)
++.+++++.++++.+++|+++ +.|.+.+.|+.+.+|.++|++|+++||+++.+ ++|||.|+++.+...++|++++.|+
T Consensus 15 ~~~~~~~~~~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~ 93 (414)
T 2or0_A 15 ENLYFQGMGRVLDRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDG 93 (414)
T ss_dssp --------CHHHHHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCH
T ss_pred cCCCCccHHHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 455788899999999999986 88888888999999999999999999999977 9999999999999999999999999
Q ss_pred hhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCC
Q 014583 131 SCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNST 210 (422)
Q Consensus 131 s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~ 210 (422)
++++.+.+|. ++...|..+|+++||++|+| +|+.++|+++| | .|+|++++|||+|||+|.|+||+.
T Consensus 94 ~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~ 159 (414)
T 2or0_A 94 ASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTD 159 (414)
T ss_dssp HHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGG
T ss_pred HHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCc
Confidence 9998888875 67788999999999999999 79999999988 4 589999999999999999999999
Q ss_pred cccEEEEEEEecC---CC---CeEEEEEeCCCCCeeee-cccCccccccccceeEEEceeecCCCCCCCCC---------
Q 014583 211 FADVLVIFARNTT---TN---QINGYLVKKDAPGLTVT-KIENKIGLRIVQNGDILLKKVFVPDEDRLPGV--------- 274 (422)
Q Consensus 211 ~ad~~~v~a~~~~---~~---~~~~flV~~~~~Gv~~~-~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~--------- 274 (422)
.||+++|+|++++ .. ++++|+||.+ ||++. +.|+++|+++++++.|.||||+||++++|+..
T Consensus 160 ~Ad~~~v~a~~~~~~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g 237 (414)
T 2or0_A 160 HCQWAFLGAMVGDGEGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQK 237 (414)
T ss_dssp GCSEEEEEEEECC-----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHH
T ss_pred hhhEEEEEEEecCCCCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCc
Confidence 9999999999863 12 7899999997 89999 99999999999999999999999999999741
Q ss_pred ----CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014583 275 ----NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349 (422)
Q Consensus 275 ----~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~f-g~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~ 349 (422)
.++......+...|+.+++.++|+++++++.+++|+++|++| |+||.++|.+|++|++|.+++++++++++++++
T Consensus 238 ~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~ 317 (414)
T 2or0_A 238 EAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETAD 317 (414)
T ss_dssp HHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123334455678999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHH----cCCCC----hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHH-HHHHHHHHHhh
Q 014583 350 LYE----KGAMT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFV-CKNLIVSNYLK 420 (422)
Q Consensus 350 ~~d----~~~~~----~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~-~~~~~~~~~~~ 420 (422)
.++ .+... ...++++|.++++.+.++++.|+|+|||+||+.+++++|+|||++...+|++ +++++...+.+
T Consensus 318 ~~~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~ 397 (414)
T 2or0_A 318 RFYDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASAL 397 (414)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHH
Confidence 998 55432 2367899999999999999999999999999999999999999999999988 66665555543
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=7.2e-58 Score=453.75 Aligned_cols=344 Identities=14% Similarity=0.090 Sum_probs=309.4
Q ss_pred HHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCchhhHHHHH
Q 014583 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILV 138 (422)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~s~~~~~~~ 138 (422)
.++++.+++|+++ +.|.+.+.|+.+.+|.+.|++|+++||+++.+ ++|||.|+++.+.+.++|++++.|+++++.+.+
T Consensus 10 ~~l~~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~ 88 (394)
T 2rfq_A 10 HEVMQRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSI 88 (394)
T ss_dssp SHHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHH
Confidence 3689999999985 88888888999999999999999999999977 999999999999999999999999999988777
Q ss_pred HhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCCcccEEEEE
Q 014583 139 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIF 218 (422)
Q Consensus 139 h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~~ad~~~v~ 218 (422)
|. ++...|..+|+++||++|+| +|+.++|+++| | .|+|++++|||+|||+|.||||+.+||+++|+
T Consensus 89 ~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ 154 (394)
T 2rfq_A 89 IG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLG 154 (394)
T ss_dssp HH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEE
T ss_pred HH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEe
Confidence 75 67778889999999999999 79999999988 4 58999999999999999999999999999999
Q ss_pred EEecCCC---CeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCC--------C-----CCHHHHHH
Q 014583 219 ARNTTTN---QINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG--------V-----NSFQDTSK 282 (422)
Q Consensus 219 a~~~~~~---~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~--------~-----~~~~~~~~ 282 (422)
|++++++ ++++|+||.+ ||++.+.|+++|++++++++|.|+||+||++++|+. . .++.....
T Consensus 155 a~~~~~g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~ 232 (394)
T 2rfq_A 155 GPVIKDGRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMP 232 (394)
T ss_dssp EEEEETTEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSC
T ss_pred eeecCCCCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCcccccc
Confidence 9984222 7899999997 899999999999999999999999999999999964 1 12334445
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---hcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----cCC
Q 014583 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERK---QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE----KGA 355 (422)
Q Consensus 283 ~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~---~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d----~~~ 355 (422)
.+...|+.+++.++|+++++++.+++|+++|+ +||+||.++|.+|++|++|.+++++++++++++++.++ .+.
T Consensus 233 ~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~ 312 (394)
T 2rfq_A 233 WGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGE 312 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 56789999999999999999999999999999 99999999999999999999999999999999999998 554
Q ss_pred CC----hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHH-HHHHHHHHHhh
Q 014583 356 MT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFV-CKNLIVSNYLK 420 (422)
Q Consensus 356 ~~----~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~-~~~~~~~~~~~ 420 (422)
.. ...++++|.++++.+.++++.|+|+|||+||+.+++++|+|||++...+|++ +.+++...+.+
T Consensus 313 ~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~ 382 (394)
T 2rfq_A 313 EVPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGT 382 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHH
Confidence 32 2357899999999999999999999999999999999999999999999988 66666655544
No 34
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=1.5e-57 Score=455.11 Aligned_cols=343 Identities=13% Similarity=0.074 Sum_probs=308.9
Q ss_pred HHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccc-cccCCCCCCHHHHHHHHHHHHhcCchhhHHHHHH
Q 014583 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVH 139 (422)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~e~la~~d~s~~~~~~~h 139 (422)
++++.+++|+++ +.|.+.+.|+.+.+|.+.|++|.++||+++.+ ++|||.|+++.+...+.|++++.|+++++.+..|
T Consensus 39 ~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~ 117 (422)
T 2jbr_A 39 SMLEKIQQILPQ-IAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLL 117 (422)
T ss_dssp CHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHH
Confidence 578999999984 88888888999999999999999999999977 9999999999999999999999999998877777
Q ss_pred hhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEECCEEEEEeEeeecCCCCcccEEEEEE
Q 014583 140 SSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219 (422)
Q Consensus 140 ~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~~ad~~~v~a 219 (422)
. ++...+..+|+++||++|+|+ |+.++|+++| | .|+|++++|||+|||+|.|+||+.+||+++|+|
T Consensus 118 ~-~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a 183 (422)
T 2jbr_A 118 C-THSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGF 183 (422)
T ss_dssp H-HHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEE
T ss_pred H-HHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEE
Confidence 4 677788999999999999996 8999999988 4 579999999999999999999999999999999
Q ss_pred EecCC---CCeEEEEEeCCCCCeeeecccCccccccccceeEEEceeecCCCCCCCCC---------CC-----HHHHHH
Q 014583 220 RNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV---------NS-----FQDTSK 282 (422)
Q Consensus 220 ~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~---------~~-----~~~~~~ 282 (422)
+++++ .++++|+||.+ ||++.+.|+++|++++++++|.|+||+||++++|+.. .+ +.....
T Consensus 184 ~~~~~~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~ 261 (422)
T 2jbr_A 184 NRFDADGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTP 261 (422)
T ss_dssp EEECTTSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSC
T ss_pred EecCCCCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccc
Confidence 98532 37889999997 8999999999999999999999999999999999752 22 334455
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCC
Q 014583 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERK--QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE----KGAM 356 (422)
Q Consensus 283 ~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~--~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d----~~~~ 356 (422)
.+...|+.+++.++|+++++++.+++|+++|+ +||+||+++|.+|++|++|.+++++++++++++++.++ .+..
T Consensus 262 ~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~ 341 (422)
T 2jbr_A 262 YRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQY 341 (422)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67789999999999999999999999999998 99999999999999999999999999999999999988 5543
Q ss_pred C----hhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhhhccccHHHHH-HHHHHHHhh
Q 014583 357 T----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLFFLHLDHFVCK-NLIVSNYLK 420 (422)
Q Consensus 357 ~----~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~-~~~~~~~~~ 420 (422)
. ...++++|.++++.+.++++.++|+|||.||+.+++++|+|||++...+|++.+ +++...+.+
T Consensus 342 ~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~ 410 (422)
T 2jbr_A 342 PNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGR 410 (422)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHH
Confidence 2 236789999999999999999999999999999999999999999999998877 666555544
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=1.3e-55 Score=461.60 Aligned_cols=366 Identities=21% Similarity=0.231 Sum_probs=311.3
Q ss_pred CCcccCcc-CCC-HHHHHHHHHHHHHHHhhccccHHHHHHhCCCCHHHHHHHHhcccccccccccCCCCCCHHHHHHHHH
Q 014583 46 SDYYQFDD-LLT-SEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIA 123 (422)
Q Consensus 46 ~~~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~e 123 (422)
+|+..|.. ..+ +++.++++.+++|++++.... ...+....++++.|+.|++.|++...++++| .+..+...+.+
T Consensus 16 f~~~~l~~~~~~~~e~~~lr~~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~l~~~p~e~G---~~~~~~~~v~e 91 (659)
T 1w07_A 16 FDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFE-KSNRARLSRKELFKSTLRKCAHAFKRIIELR---LNEEEAGRLRH 91 (659)
T ss_dssp SCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGC-CTTTTSSCHHHHHHHHHHHHHHHHHHHHHTT---CCHHHHHHHHH
T ss_pred CCHHHHHHHHCCChHHHHHHHHHHHHHhcCcccc-cCCccCCChHHHHHHHHHHHHHHHHhHHHhC---CCchHHHHHHH
Confidence 45555432 334 789999999999998853221 1111123567889999999988876557787 35667666655
Q ss_pred HHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE--CCEEEEE-
Q 014583 124 EIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILE- 200 (422)
Q Consensus 124 ~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~--~~~~~Ln- 200 (422)
++ +.+++ +.+|.++++..|..+|+++||++|||++.+|++++|+|+|||++|||+.+++|+|+++ +|+|+||
T Consensus 92 ~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLnt 166 (659)
T 1w07_A 92 FI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHT 166 (659)
T ss_dssp HH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEC
T ss_pred Hh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcC
Confidence 55 45555 6788777888999999999999999999999999999999999999999999999998 6899999
Q ss_pred ----eEeeecCC-CCcccEEEEEEEecCC---CCeEEEEEeC-C------CCCeeeecccCccc---cccccceeEEEce
Q 014583 201 ----GQKRWIGN-STFADVLVIFARNTTT---NQINGYLVKK-D------APGLTVTKIENKIG---LRIVQNGDILLKK 262 (422)
Q Consensus 201 ----G~K~~is~-a~~ad~~~v~a~~~~~---~~~~~flV~~-~------~~Gv~~~~~~~~~G---l~~~~~~~l~f~~ 262 (422)
|+|+|||| +..||+++|+|+++.+ .|+++|+||. + .|||++.++|+++| +++++++.|.|+|
T Consensus 167 P~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~ 246 (659)
T 1w07_A 167 PTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDH 246 (659)
T ss_dssp CSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESS
T ss_pred CCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEecc
Confidence 99999999 7899999999998643 3789999995 4 69999999999999 9999999999999
Q ss_pred eecCCCCCCCC-------CCCH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCc-------cccc
Q 014583 263 VFVPDEDRLPG-------VNSF------QDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGA-------PLAA 322 (422)
Q Consensus 263 v~Vp~~~~l~~-------~~~~------~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~-------~l~~ 322 (422)
|+||++++|+. +.++ ......+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 247 VrVP~~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~ 326 (659)
T 1w07_A 247 VRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVID 326 (659)
T ss_dssp EEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGG
T ss_pred EEECHHHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhc
Confidence 99999999985 2222 23456678999999999999999999999999999999998 8999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCC-----ChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccC
Q 014583 323 FQINQQKLVQMLGNIQAMILVGWRLCKLYE-------KGAM-----TPGHASLGKSWITARARETVALGRELLGGNGILS 390 (422)
Q Consensus 323 ~~~vq~~La~~~~~~~a~~~~~~~~a~~~d-------~~~~-----~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~ 390 (422)
+|.+|++|++|.+++++++.+++++++.++ .+.. ....++++|+++++.+.++++.|+|+|||+||+.
T Consensus 327 ~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~ 406 (659)
T 1w07_A 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLW 406 (659)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 999999999999999999999999988764 2222 2446789999999999999999999999999999
Q ss_pred cchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 391 DFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 391 ~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
+++++|+|||++..++++|+++++..++.+
T Consensus 407 ~~~l~r~~rda~~~~~~eG~~~v~~~~iar 436 (659)
T 1w07_A 407 CSGLPELFAVYVPACTYEGDNVVLQLQVAR 436 (659)
T ss_dssp GGSHHHHHHHHGGGGTTTSCHHHHHHHHHH
T ss_pred ccCHHHHHHhcceeEEEeCChHHHHHHHHH
Confidence 999999999999999999988888777665
No 36
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=3.5e-53 Score=442.52 Aligned_cols=364 Identities=18% Similarity=0.230 Sum_probs=293.8
Q ss_pred CCcccCccCC--CHHHHHHHHHHHHHHHhhccccHHHHHHhCCCCH-H----HHHHHHhcccccccccccCCCCCCHHHH
Q 014583 46 SDYYQFDDLL--TSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPF-H----VIPKLGALRVAGGTIKGYGCPGHSVTGA 118 (422)
Q Consensus 46 ~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~l~~~Gl~~~~~~~~GG~g~~~~~~ 118 (422)
+|+..|...+ +++..++++++++++.++ |.-... ....+.. + ..++++.+. .. ++++||.+ ..+.
T Consensus 14 f~~~~l~~~l~g~~~~~~~r~~~~~~l~~~--p~~~~~-~~~~~~~~e~~~~~~~~~~~l~--~~-~~~~~~~~--~~~~ 85 (661)
T 2ddh_A 14 FNPELITHILDGSPENTRRRREIENLILND--PDFQHE-DYNFLTRSQRYEVAVKKSATMV--KK-MREYGISD--PEEI 85 (661)
T ss_dssp SCHHHHHHHHHTSHHHHHHHHHHHHHHHTC--GGGCCS-CGGGSCHHHHHHHHHHHHHHHH--HH-HHHTTCCC--HHHH
T ss_pred CCHHHHHHHHCCChhHHHHHHHHHHHHhcC--cccccC-CcCCCCHHHHHHHHHHHHHHHH--HH-HHHcCCCC--chHH
Confidence 4666665433 567889999999999875 321100 0001111 1 122222211 11 25677765 3333
Q ss_pred HHHHHHHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhcCcceeEEeecCCCCCCCcCCCeeEEEEE--CCE
Q 014583 119 AIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGG 196 (422)
Q Consensus 119 ~~~~e~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~Gs~~~~~~t~a~~~--~~~ 196 (422)
.+.+++... +++..+.+|+++++..|..+|+++||++|||++.+|++++|+|+|||++|||+.+++|+|+++ +|+
T Consensus 86 -~~~~~~~~~--~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~ 162 (661)
T 2ddh_A 86 -MWFKNSVHR--GHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQE 162 (661)
T ss_dssp -HHHHHHHHT--TCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTE
T ss_pred -HHHHHHhcc--chhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCe
Confidence 336666543 335567788878889999999999999999999999999999999999999999999999998 789
Q ss_pred EEEE-----eEeeecCC-CCcccEEEEEEEecCC---CCeEEEEEeC-C------CCCeeeecccCccccccccceeEEE
Q 014583 197 WILE-----GQKRWIGN-STFADVLVIFARNTTT---NQINGYLVKK-D------APGLTVTKIENKIGLRIVQNGDILL 260 (422)
Q Consensus 197 ~~Ln-----G~K~~is~-a~~ad~~~v~a~~~~~---~~~~~flV~~-~------~~Gv~~~~~~~~~Gl~~~~~~~l~f 260 (422)
|+|| |+|+|+|| +..||+++|+|+++.+ .|+++|+||. + .|||++.++|+++|+++++++.|.|
T Consensus 163 ~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~F 242 (661)
T 2ddh_A 163 FILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKM 242 (661)
T ss_dssp EEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEE
T ss_pred EEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEe
Confidence 9999 99999999 7799999999998532 4789999995 4 7999999999999999999999999
Q ss_pred ceeecCCCCCCCCC-----CC-------HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCc-------ccc
Q 014583 261 KKVFVPDEDRLPGV-----NS-------FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGA-------PLA 321 (422)
Q Consensus 261 ~~v~Vp~~~~l~~~-----~~-------~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~-------~l~ 321 (422)
+||+||++++|+.. .+ +......+..+|+.+++.++|+++++++.+++|+++|+|||+ ||.
T Consensus 243 d~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~ 322 (661)
T 2ddh_A 243 DNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQIL 322 (661)
T ss_dssp SSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGG
T ss_pred ccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCcccccc
Confidence 99999999999863 23 456667788999999999999999999999999999999998 899
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCC-----ChhhhhHHHHHHHHHHHHHHHHHHHHhCCcccc
Q 014583 322 AFQINQQKLVQMLGNIQAMILVGWRLCKLYEK-------GAM-----TPGHASLGKSWITARARETVALGRELLGGNGIL 389 (422)
Q Consensus 322 ~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~-------~~~-----~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~ 389 (422)
++|.+|++|++|.+++++++.+++.+++.++. +.. ....++++|+++++.+.++++.|+++|||+||+
T Consensus 323 ~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~ 402 (661)
T 2ddh_A 323 DFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYS 402 (661)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999998863 221 244678999999999999999999999999999
Q ss_pred CcchHHHHHhhhhccccHHHHHHHHHHHHhh
Q 014583 390 SDFLVAKVIMLFFLHLDHFVCKNLIVSNYLK 420 (422)
Q Consensus 390 ~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~ 420 (422)
.+++++|+|||+++.++++|+++++..++.+
T Consensus 403 ~~~~l~r~~rda~~~~~~eG~~~vl~~~iar 433 (661)
T 2ddh_A 403 HSSGIPNIYVTFTPACTFEGENTVMMLQTAR 433 (661)
T ss_dssp GGGSHHHHHHHHGGGGTSSSCHHHHHHHHHH
T ss_pred ccCcHHHHHHhcceeeEecCchHHHHHHHHH
Confidence 9999999999999999999988888877765
No 37
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=5.9e-52 Score=423.52 Aligned_cols=321 Identities=17% Similarity=0.186 Sum_probs=286.6
Q ss_pred HHHHHHHHhcccccccc---cccCCCCCCHHHHHHHHHHHHhcCchhhHHHHHHhhHHHHHHHhcCCHHHHHhhhhhhhc
Q 014583 89 FHVIPKLGALRVAGGTI---KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQ 165 (422)
Q Consensus 89 ~~~~~~l~~~Gl~~~~~---~~~GG~g~~~~~~~~~~e~la~~d~s~~~~~~~h~~~~~~~i~~~g~~~qk~~~l~~~~~ 165 (422)
.+.++.+.+.||+++.+ +++||.+ ........++..+.+..+...+|++ +...|..+| ++||++|+|++.+
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~----~~~~~~~~~~~~~~~~~~p~~~t~~-~~~~L~~~g-~eqk~~~lp~l~s 162 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFV----ARAARFMLHAQVEAGSLCPITMTFA-ATPLLLQML-PAPFQDWTTPLLS 162 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHH----HHHHHHHHHHHHCSTTHHHHHHHHH-HHHHHHHHC-CGGGGGGHHHHTC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHH----HHHHHHHHHHHHHHhhhcHHHHHHH-HHHHHHHcC-HHHHHHHHHHHhC
Confidence 57888999999999954 6788543 2333333444555666666666764 566788889 9999999999999
Q ss_pred Ccc-------------eeEEeecCCCCCCCcCCCeeEEEEE-CCEEEEEeEeeecCCCCcccEEEEEEEecCCCCeEEEE
Q 014583 166 LNT-------------IACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYL 231 (422)
Q Consensus 166 g~~-------------~~~~a~tE~~~Gs~~~~~~t~a~~~-~~~~~LnG~K~~is~a~~ad~~~v~a~~~~~~~~~~fl 231 (422)
|++ ++|+++|||++|||+.+++|+|+++ +|+|+|||+|+|+| +.+||+++|+|+++ +|+++|+
T Consensus 163 ge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~--~Gis~fl 239 (541)
T 3djl_A 163 DRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA--GGLSCFF 239 (541)
T ss_dssp SCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET--TEEEEEE
T ss_pred CCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC--CceEEEE
Confidence 998 8899999999999999999999999 78999999999999 89999999999996 7899999
Q ss_pred EeCCCC-----CeeeecccCccccccccceeEEEceeecCCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 014583 232 VKKDAP-----GLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDM 305 (422)
Q Consensus 232 V~~~~~-----Gv~~~~~~~~~Gl~~~~~~~l~f~~v~Vp~~~~l~~~-~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 305 (422)
||++.| ||++.+.|+++|++++++++|.|+||+ +++||.. .++......++.+|+.+++.++|+++++++.
T Consensus 240 Vp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~ 316 (541)
T 3djl_A 240 VPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSL 316 (541)
T ss_dssp EESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988 999999999999999999999999996 7899876 6788888999999999999999999999999
Q ss_pred HHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------hhhhhHHHHHHHHHHHHHHHHH
Q 014583 306 CHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT------PGHASLGKSWITARARETVALG 379 (422)
Q Consensus 306 a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~------~~~~~~~K~~~~~~~~~v~~~~ 379 (422)
+++|+++|++||+||.++|.+|++|++|.+++++++++++++++.++.+... ...++++|+++++.+.++++.+
T Consensus 317 a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a 396 (541)
T 3djl_A 317 AIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEA 396 (541)
T ss_dssp HHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876432 2346799999999999999999
Q ss_pred HHHhCCccccCcchHHHHHhhhhccccHHHHHHHHHHHHhhc
Q 014583 380 RELLGGNGILSDFLVAKVIMLFFLHLDHFVCKNLIVSNYLKL 421 (422)
Q Consensus 380 ~~~~Gg~g~~~~~~~~r~~rD~~~~~~~~~~~~~~~~~~~~l 421 (422)
+|+|||+||..+++++|+|||+++.++++|+++++...+.+.
T Consensus 397 ~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~ 438 (541)
T 3djl_A 397 MEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRV 438 (541)
T ss_dssp HHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHH
T ss_pred HHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887764
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.6e-40 Score=331.33 Aligned_cols=248 Identities=17% Similarity=0.144 Sum_probs=205.9
Q ss_pred HHHhcCC--HHHHHhhhhhhhcCcceeEEeecCCCCC--------CCc-CCCeeEEEEECCEEEEEeEeeecCCCCcccE
Q 014583 146 TIALCGS--EEQKQKYLPSLAQLNTIACWALTEPAYG--------SDA-SALNTTATKVEGGWILEGQKRWIGNSTFADV 214 (422)
Q Consensus 146 ~i~~~g~--~~qk~~~l~~~~~g~~~~~~a~tE~~~G--------s~~-~~~~t~a~~~~~~~~LnG~K~~is~a~~ad~ 214 (422)
.+..+|+ ++||++|||++.+|++++|+|+|||+.| ||+ ..+. ++++++|||+|||+|+|+||++.||+
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~ 197 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHE 197 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSE
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCE
Confidence 4558999 9999999999999999999999999874 675 3444 88999999999999999999999999
Q ss_pred EEEEEEecC----CCCeEEEEEeCCCCCeeee---cccCc----------ccc-cc-ccceeEEEceeecCCCCCC--CC
Q 014583 215 LVIFARNTT----TNQINGYLVKKDAPGLTVT---KIENK----------IGL-RI-VQNGDILLKKVFVPDEDRL--PG 273 (422)
Q Consensus 215 ~~v~a~~~~----~~~~~~flV~~~~~Gv~~~---~~~~~----------~Gl-~~-~~~~~l~f~~v~Vp~~~~l--~~ 273 (422)
++|+++++. .++.++|+||.+.|||++. +.+++ +|+ +. .+++.|.||||+||++++| |.
T Consensus 198 ~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~ 277 (490)
T 1u8v_A 198 HIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQE 277 (490)
T ss_dssp EEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESC
T ss_pred EEEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCC
Confidence 999999742 1357899999999999995 44544 666 64 6788999999999999998 44
Q ss_pred C-CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014583 274 V-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE 352 (422)
Q Consensus 274 ~-~~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d 352 (422)
. .++......+...|+.++++++|.++.++..+...... || |.++|.||++|++|.+++++++++++++++..+
T Consensus 278 ~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~~d 352 (490)
T 1u8v_A 278 YDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASHVKDKLIEMTHLNETLYCCGIACSAEGY 352 (490)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3 34555566677888888887777777666666554422 44 899999999999999999999999999999886
Q ss_pred c---CC--CChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhh
Q 014583 353 K---GA--MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKVIMLF 401 (422)
Q Consensus 353 ~---~~--~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~ 401 (422)
. +. +...+++++|+++++.+.++++.++|++||.|+. +|++|+|||.
T Consensus 353 ~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 353 PTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp ECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred ccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 4 22 3455789999999999999999999999999998 6777777777
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=8.6e-40 Score=329.53 Aligned_cols=289 Identities=15% Similarity=0.112 Sum_probs=225.4
Q ss_pred hCCCCHHHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhcCchhhHHHHHHhhHHHHHHHhcC-CHHHHHhhhhh
Q 014583 84 KAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCG-SEEQKQKYLPS 162 (422)
Q Consensus 84 ~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~e~la~~d~s~~~~~~~h~~~~~~~i~~~g-~~~qk~~~l~~ 162 (422)
....+.++.++.+..|+++.. .+|..|.++.-...+.-. ++.. ...++ .++||++|||+
T Consensus 73 ~~~~~~dL~~~~~~~~lw~~~--~~g~~gRs~~~~~~~~~~-----------------~a~~-~~~~~~~~eqk~~~L~~ 132 (481)
T 2yyk_A 73 IPKTKEDLKRRGQAYKLWADQ--NLGMMGRSPDYLNAVVMA-----------------YAAS-ADYFGEFAENVRNYYRY 132 (481)
T ss_dssp CCCSHHHHHHHHHHHHHHHHH--TTTCCCCCTHHHHHHHHH-----------------HHHT-GGGGGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhc--CCcccccChhhHHHHHHh-----------------ccCC-hHHHHHHHHHHHHHHHH
Confidence 345667888888888888754 234333332110011111 1110 01111 47999999999
Q ss_pred hhcCcceeEEeecCCCCC--------CCcCCCeeEEE-EECCEEEEEeEeeecCCCCcccEEEEEEEecC---C-CCeEE
Q 014583 163 LAQLNTIACWALTEPAYG--------SDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIFARNTT---T-NQING 229 (422)
Q Consensus 163 ~~~g~~~~~~a~tE~~~G--------s~~~~~~t~a~-~~~~~~~LnG~K~~is~a~~ad~~~v~a~~~~---~-~~~~~ 229 (422)
+.+|++++|+|+|||+.| ||+. +.|+++ +++|+|+|||+|+|||| +.||+++|+|+++. + +++++
T Consensus 133 l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~~~~~~~~~~s~ 210 (481)
T 2yyk_A 133 LRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSILLQAGSEKYALA 210 (481)
T ss_dssp HHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSCCCTTCGGGCEE
T ss_pred HHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecCCCCCCCCeEEE
Confidence 999999999999999976 6764 667765 68999999999999999 99999999999852 2 35889
Q ss_pred EEEeCCCCCeeee--cccC--------cccccc-ccceeEEEceeecCCCCCC--CCC-CCHHHH--HHHhHHHHHHHHH
Q 014583 230 YLVKKDAPGLTVT--KIEN--------KIGLRI-VQNGDILLKKVFVPDEDRL--PGV-NSFQDT--SKVLAVSRVMVAW 293 (422)
Q Consensus 230 flV~~~~~Gv~~~--~~~~--------~~Gl~~-~~~~~l~f~~v~Vp~~~~l--~~~-~~~~~~--~~~l~~~r~~~aa 293 (422)
|+||.+.|||++. +.+. ++|.+. .+++.|.||||+||++++| |.. .++... ...+..+|+..++
T Consensus 211 flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~~l~~~r~~~~~ 290 (481)
T 2yyk_A 211 FALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATGALNHMAHQVVA 290 (481)
T ss_dssp EEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhhcchhHHHHHHH
Confidence 9999999999995 3333 256774 7889999999999999998 443 223323 4567889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CChhhhhHHHHHH
Q 014583 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK---GA--MTPGHASLGKSWI 368 (422)
Q Consensus 294 ~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~---~~--~~~~~~~~~K~~~ 368 (422)
..+|.++.++..+.+++.. || |.++|.||++|++|.+++++++++++++++..+. +. +...+++++|+++
T Consensus 291 ~~~g~a~~~lg~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~~~~~s~aK~~a 365 (481)
T 2yyk_A 291 LKTAKTEAFLGVAALMAEG---IG--ADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLY 365 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TT--GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh---cC--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHH
Confidence 9999999999999988874 44 9999999999999999999999999999998864 32 3455789999999
Q ss_pred HHHHHHHHHHHHHHhCCccccCcchHHHHHhhhh
Q 014583 369 TARARETVALGRELLGGNGILSDFLVAKVIMLFF 402 (422)
Q Consensus 369 ~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~~ 402 (422)
++.+.++++.++|++||.|+. +|++|+| |.+
T Consensus 366 ~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~ 396 (481)
T 2yyk_A 366 PRLYPRIREILEQIGASGLIT--LPSEKDF-KGP 396 (481)
T ss_dssp HHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HST
T ss_pred HHHHHHHHHHHHHHhCccccc--CccHHHh-Chh
Confidence 999999999999999998777 7888888 774
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=2.4e-34 Score=289.54 Aligned_cols=234 Identities=13% Similarity=0.131 Sum_probs=182.7
Q ss_pred cCC--HHHHHhhhhhhhcCcceeEEeecCCCC--------CCCcCCCeeEEEEECCEEEEEeEeeecCCCCcccEEEEEE
Q 014583 150 CGS--EEQKQKYLPSLAQLNTIACWALTEPAY--------GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 219 (422)
Q Consensus 150 ~g~--~~qk~~~l~~~~~g~~~~~~a~tE~~~--------Gs~~~~~~t~a~~~~~~~~LnG~K~~is~a~~ad~~~v~a 219 (422)
+|+ .+|+++|||++.+|++++|+|+|||+. |||+ .+.++ .+++|||+|||+|.||||+..||+++|+|
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 554 488999999999999999999999986 5777 45443 45789999999999999999999999999
Q ss_pred Ee-cCC--CCeEEEEEeCCCCCeeeecccCcccc-----cc-----ccceeEEEceeecCCCCCC--CCC-CCHHHHHHH
Q 014583 220 RN-TTT--NQINGYLVKKDAPGLTVTKIENKIGL-----RI-----VQNGDILLKKVFVPDEDRL--PGV-NSFQDTSKV 283 (422)
Q Consensus 220 ~~-~~~--~~~~~flV~~~~~Gv~~~~~~~~~Gl-----~~-----~~~~~l~f~~v~Vp~~~~l--~~~-~~~~~~~~~ 283 (422)
++ +.. +.+++|+||.+.|||++.+.+.++|. +. ..++.|.||||+||++++| |.. .++......
T Consensus 205 ~t~~~~~~~~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~ 284 (515)
T 3hwc_A 205 LYRPGIPGEQVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRI 284 (515)
T ss_dssp CCCTTCCGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHH
T ss_pred EecCCCCCCeEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHH
Confidence 98 321 23889999999999999877777663 22 2378999999999999999 554 355444332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CCh
Q 014583 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK---GA--MTP 358 (422)
Q Consensus 284 l~~~r~~~aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~---~~--~~~ 358 (422)
+...+....+..+|.+..++..+..++. .|| |.++|.||++|++|.+.+++++++++++++..+. +. +..
T Consensus 285 ~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~ 359 (515)
T 3hwc_A 285 FDWVHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNP 359 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence 3333211223344555555554444433 244 8999999999999999999999999999988765 22 455
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhCCccccC
Q 014583 359 GHASLGKSWITARARETVALGRELLGGNGILS 390 (422)
Q Consensus 359 ~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~ 390 (422)
..++++|.++++.+.++++.++|++||.+++.
T Consensus 360 ~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~ 391 (515)
T 3hwc_A 360 LIYDFGRAHFLQNQMSVMYELLDLAGRSSLMI 391 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeC
Confidence 67899999999999999999999999999975
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.96 E-value=3.6e-28 Score=245.03 Aligned_cols=241 Identities=12% Similarity=0.051 Sum_probs=189.7
Q ss_pred HHHHhhhhhhhcCcceeEEeecCCCCC-----CCcCCCeeEEE-EECCEEEEEeEeeecCCCCcccEEEEEEEecCC---
Q 014583 154 EQKQKYLPSLAQLNTIACWALTEPAYG-----SDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIFARNTTT--- 224 (422)
Q Consensus 154 ~qk~~~l~~~~~g~~~~~~a~tE~~~G-----s~~~~~~t~a~-~~~~~~~LnG~K~~is~a~~ad~~~v~a~~~~~--- 224 (422)
+...+|+..+.++++..+.++|+|... +....+...++ +++|||||||.|.|+||++.||+++|++++...
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 556789999999999999999999641 11122233444 478999999999999999999999999988542
Q ss_pred CCeEEEEEeCCCCCeeeeccc---------Ccccccccc-ceeEEEceeecCCCCCC--CCCC-CHHHHHHHhHHHHHHH
Q 014583 225 NQINGYLVKKDAPGLTVTKIE---------NKIGLRIVQ-NGDILLKKVFVPDEDRL--PGVN-SFQDTSKVLAVSRVMV 291 (422)
Q Consensus 225 ~~~~~flV~~~~~Gv~~~~~~---------~~~Gl~~~~-~~~l~f~~v~Vp~~~~l--~~~~-~~~~~~~~l~~~r~~~ 291 (422)
++...|+||.++|||++.... .+++.++.. .+.|.||||+||++++| |..+ ++......+...|...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 457889999999999985433 334444433 37899999999999987 5442 4456667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCChhhhhHHHH
Q 014583 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-----AMTPGHASLGKS 366 (422)
Q Consensus 292 aa~~~G~a~~al~~a~~y~~~R~~fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~-----~~~~~~~~~~K~ 366 (422)
++..+|.++.++..+..++... | +.++|+||++|++|.+.+++++++++.++...... .+....++++|.
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8888999999999998888643 4 88999999999999999999999998877643322 244567899999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCcchHHHHHhhh
Q 014583 367 WITARARETVALGRELLGGNGILSDFLVAKVIMLF 401 (422)
Q Consensus 367 ~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~r~~rD~ 401 (422)
++++...+++++++|++||.|++- |.++.|+|-
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~~--Pse~d~~~~ 401 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALIF--ASEDQWNDE 401 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTCC--CCHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHhCCccccC--CCHHHhcCh
Confidence 999999999999999999999983 555555554
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=94.62 E-value=0.19 Score=51.42 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=72.0
Q ss_pred cCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcch
Q 014583 316 FGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK-GAM-TPGHASLGKSWITARARETVALGRELLGGNGILSDFL 393 (422)
Q Consensus 316 fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~-~~~-~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~ 393 (422)
+|+.|.+.|.+..+|+++.+.+|+|.+.+.++.+.+.. +.+ ...+..++++||.+...++-..+.++. .++..+..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 68899999999999999999999999999999988875 543 345688999999999999999999998 56666655
Q ss_pred HHHHHhhhhccc
Q 014583 394 VAKVIMLFFLHL 405 (422)
Q Consensus 394 ~~r~~rD~~~~~ 405 (422)
+..++..++-+.
T Consensus 560 ~~~~~~~~~~~~ 571 (597)
T 3owa_A 560 LRMMLSSLRKLT 571 (597)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555555443
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=89.94 E-value=2.7 Score=42.99 Aligned_cols=70 Identities=19% Similarity=0.123 Sum_probs=59.7
Q ss_pred cCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh-hhhhHHHHHHHHHHHHHHHHHHHHhCC
Q 014583 316 FGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTP-GHASLGKSWITARARETVALGRELLGG 385 (422)
Q Consensus 316 fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~-~~~~~~K~~~~~~~~~v~~~~~~~~Gg 385 (422)
.|..+.+.|.+..||+++...++++...+.++.+.++.+.+.. .+..+++.||.+...++-..+.++..+
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 576 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSD 576 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5778889999999999999999999999888887776665543 357889999999999999999887766
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=73.30 E-value=28 Score=35.09 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=55.5
Q ss_pred cCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhHHHHHHHHHHHHHHHHHHHHhCCccccCcchHH
Q 014583 316 FGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVA 395 (422)
Q Consensus 316 fg~~l~~~~~vq~~La~~~~~~~a~~~~~~~~a~~~d~~~~~~~~~~~~K~~~~~~~~~v~~~~~~~~Gg~g~~~~~~~~ 395 (422)
+|..+.+.|.+-.+++++.+.+++++..+.++.+. .+. ...+++.|+.+...++...+.+++ .++..+.|..
T Consensus 468 ~~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 539 (577)
T 2z1q_A 468 YGQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVL--PRLVEGDEAR 539 (577)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHG--GGTCCTTTTH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCchh
Confidence 35667677899999999999999999988887765 221 788999999999999998888877 3344444433
Done!