Query 014586
Match_columns 422
No_of_seqs 118 out of 139
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 14:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014586.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014586hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vcsa1 a.47.2.1 (A:8-96) Vesi 30.0 16 0.0012 27.7 3.0 19 393-411 55-73 (89)
2 d1jfia_ a.22.1.3 (A:) Negative 29.5 40 0.0029 23.5 5.0 50 161-211 6-55 (66)
3 d2pjqa1 a.211.1.1 (A:1-215) Un 23.4 41 0.003 28.5 4.8 66 186-251 118-206 (215)
4 d1r6ta1 a.16.1.3 (A:7-60) N-te 20.6 60 0.0044 22.8 4.3 48 288-339 2-49 (54)
5 d2bdea1 c.108.1.23 (A:2-459) C 19.7 50 0.0037 31.8 5.0 35 237-271 324-358 (458)
6 d1ugoa_ a.7.7.1 (A:) BAG-famil 19.0 1.3E+02 0.0094 23.0 6.5 37 188-224 19-55 (99)
7 d2o3fa1 a.4.1.20 (A:1-83) Puta 18.2 39 0.0029 24.8 3.0 65 144-219 5-69 (83)
8 d1ku5a_ a.22.1.2 (A:) Archaeal 17.9 52 0.0038 22.8 3.5 43 168-211 12-54 (66)
9 d1zaka1 c.37.1.1 (A:3-127,A:15 15.8 1.5E+02 0.011 23.0 6.3 49 290-338 131-186 (189)
10 d1htaa_ a.22.1.2 (A:) Archaeal 14.0 1.5E+02 0.011 20.3 5.2 52 155-211 4-55 (68)
No 1
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.98 E-value=16 Score=27.73 Aligned_cols=19 Identities=16% Similarity=0.634 Sum_probs=16.8
Q ss_pred hhCchhHHHHHHhhhcccc
Q 014586 393 QSLPPSIKSALRSKLQSFH 411 (422)
Q Consensus 393 ~mLP~sIRsaLRakLr~~~ 411 (422)
+.+|++.|+.+.+|||.|-
T Consensus 55 r~~p~s~R~~~~~klr~Yk 73 (89)
T d1vcsa1 55 REIPPQSRGMYSNRMRSYK 73 (89)
T ss_dssp TTSCTTTHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 3589999999999999875
No 2
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.53 E-value=40 Score=23.54 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=37.2
Q ss_pred HHHhhhccCcccchhhcccChHHHHHHHHHHHHHHHhHHHhhHhhhhccCC
Q 014586 161 RQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (422)
Q Consensus 161 ~rLr~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~~VaRlG~rC~ 211 (422)
.|.|. ||++..=-..||.|--+++.-|+-....+|-.-|..+++-.+|..
T Consensus 6 srVkk-imk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krkt 55 (66)
T d1jfia_ 6 ARIKK-IMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 55 (66)
T ss_dssp HHHHH-HHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---C
T ss_pred HHHHH-HHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44554 444333334899999999999999999999999999998877664
No 3
>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}
Probab=23.41 E-value=41 Score=28.49 Aligned_cols=66 Identities=18% Similarity=0.285 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhH--HHhhHhhh---hccCCCcccc----------------chhHHHHHHhh--hcchhhhhHHHHHHH
Q 014586 186 KIFAADKRDDLKI--FTGEVVRF---GNRSKDPQWH----------------NLGRYFEKISR--ELIPQKQLKQEAELL 242 (422)
Q Consensus 186 ~LA~AEk~eeL~~--~A~~VaRl---G~rC~DP~lh----------------~fdr~F~~l~~--~~~~~~~~~k~ae~k 242 (422)
-+--||+++.|-. +|+..+-- |+.=.||.+. .++|+|++|.. +..--..-++.|+.+
T Consensus 118 Iv~DADrLDalGaiGIaR~f~y~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~i~Hf~eKLl~l~~~m~T~~gk~lA~~R 197 (215)
T d2pjqa1 118 VVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPREHMTREQYRHQPGTAINHFYEKLFKLAALMNTDTAKALAAHR 197 (215)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHTCCSCCTTSCCCSSCCHHHHHHSCCCTTHHHHHTGGGHHHHCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhCCcccCcccccccccchhhhhcCCccHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3567899998886 56665533 3334465432 48888988765 221112235678888
Q ss_pred HHHHHHHHH
Q 014586 243 MEQLMTLVQ 251 (422)
Q Consensus 243 m~kmerlV~ 251 (422)
.+-|+.|++
T Consensus 198 ~~~m~~Fl~ 206 (215)
T d2pjqa1 198 TAVMHEFVD 206 (215)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877764
No 4
>d1r6ta1 a.16.1.3 (A:7-60) N-terminal domain of eukaryotic tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.63 E-value=60 Score=22.80 Aligned_cols=48 Identities=21% Similarity=0.249 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHHHHHHhhhhcccccccHHHHHHHHHHHHHHHHHHHHHhhC
Q 014586 288 SFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFG 339 (422)
Q Consensus 288 ~l~~lqq~l~~QRq~Vk~LK~~SLWsrt~d~vV~kLvriV~~i~~rI~~VFG 339 (422)
++.+|.++|..|=-.||.||..--=....|..|.+|- -+=+..+.+.|
T Consensus 2 S~~eL~~~I~~QGd~VR~LKa~ka~K~~id~aV~~LL----~LK~~yk~~tG 49 (54)
T d1r6ta1 2 SLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLV----SLKMSYKAAAG 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH----HHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH----HHHHHHHHhhC
Confidence 4678999999999999999976433334455555543 33445555555
No 5
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Probab=19.72 E-value=50 Score=31.75 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 014586 237 QEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQ 271 (422)
Q Consensus 237 k~ae~km~kmerlV~~Ta~LY~ELeaL~~lEq~~r 271 (422)
+|.+..++.+.+-......|-.-+..+.+++|.+.
T Consensus 324 ~ELe~Ei~~~~~~~~~~~~l~~l~~~~~~l~~~~~ 358 (458)
T d2bdea1 324 EELGEEIASQIRALPIEKKIGEAMAIKKELEQKYV 358 (458)
T ss_dssp TTHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 55555555444333333333222333445566554
No 6
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.03 E-value=1.3e+02 Score=22.97 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=28.0
Q ss_pred HHHHHHHHHhHHHhhHhhhhccCCCccccchhHHHHH
Q 014586 188 FAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEK 224 (422)
Q Consensus 188 A~AEk~eeL~~~A~~VaRlG~rC~DP~lh~fdr~F~~ 224 (422)
+..+..++++.+...|..|...|.|..+..|+.....
T Consensus 19 ~I~~i~~ev~~L~~~V~~f~~~~~dke~~~L~E~L~~ 55 (99)
T d1ugoa_ 19 RLQEIQREVKAIEPQVVGFSGLSDDKNYKRLERILTK 55 (99)
T ss_dssp HHHHHHHHHHHSHHHHHTCCCCTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 3467788888999999999999999766655554433
No 7
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=18.21 E-value=39 Score=24.82 Aligned_cols=65 Identities=6% Similarity=0.047 Sum_probs=51.4
Q ss_pred HHHHHHHhhhcCChHHHHHHhhhccCcccchhhcccChHHHHHHHHHHHHHHHhHHHhhHhhhhccCCCccccchh
Q 014586 144 TIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLG 219 (422)
Q Consensus 144 tMsK~~~L~~SLSd~eI~rLr~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~~VaRlG~rC~DP~lh~fd 219 (422)
.|.++-..+.+||..|-. |.+-|-++.+.+..+-..|..+...+--.+|.||.+++.=..|..|-
T Consensus 5 ~l~~i~~~~~~Ls~~e~~-----------ia~yil~~~~~~~~~si~~lA~~~~vS~sTi~Rf~kklG~~gf~e~k 69 (83)
T d2o3fa1 5 GLAIIQSMKHKLPPSERK-----------LADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGFQDLK 69 (83)
T ss_dssp HHHHHHHHGGGSCHHHHH-----------HHHHHHHCHHHHHTCCHHHHHHHTTCCHHHHHHHHHHTTCSSHHHHH
T ss_pred HHHHHHHHHhhCCHHHHH-----------HHHHHHcCHHHHHHccHHHHHHHHCCCHHHHHHHHHHhCCCCHHHHH
Confidence 466777778888887653 45667788889999999999999999999999999999855444443
No 8
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=17.91 E-value=52 Score=22.80 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.5
Q ss_pred cCcccchhhcccChHHHHHHHHHHHHHHHhHHHhhHhhhhccCC
Q 014586 168 LPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (422)
Q Consensus 168 L~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~~VaRlG~rC~ 211 (422)
++..|+. -||.|--+++.-||-+..+.|-.-|..++.-++|..
T Consensus 12 ~k~~~~~-ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKT 54 (66)
T d1ku5a_ 12 IRKAGAE-RVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKT 54 (66)
T ss_dssp HHHTTCS-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSE
T ss_pred HHhCccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4445665 489999999999999999999999999998887764
No 9
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=15.79 E-value=1.5e+02 Score=22.96 Aligned_cols=49 Identities=10% Similarity=0.267 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhhhh--cccc-----cccHHHHHHHHHHHHHHHHHHHHHhh
Q 014586 290 AILRAELKSQRKQVKILRK--KSLW-----SRSLEEVMEKLVDIVTFLLLEMHDAF 338 (422)
Q Consensus 290 ~~lqq~l~~QRq~Vk~LK~--~SLW-----srt~d~vV~kLvriV~~i~~rI~~VF 338 (422)
+.+++++...+++++.|.+ ...| +++.|+|.+.+..++-.|+.+....+
T Consensus 131 e~~~~rl~~y~~~~~~l~~~y~~~~~~Id~~~~idev~~~I~~~l~~il~~~~~~~ 186 (189)
T d1zaka1 131 EKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKKNEMV 186 (189)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCCCEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHHHHHHhhhhhhhc
Confidence 4567778888888777755 3566 68999999999999988888877765
No 10
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=14.01 E-value=1.5e+02 Score=20.31 Aligned_cols=52 Identities=12% Similarity=0.236 Sum_probs=43.0
Q ss_pred CChHHHHHHhhhccCcccchhhcccChHHHHHHHHHHHHHHHhHHHhhHhhhhccCC
Q 014586 155 ISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (422)
Q Consensus 155 LSd~eI~rLr~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~~VaRlG~rC~ 211 (422)
|.-..|.|+ +++-|+.+ ||+|--+++.=++-+...+|-.-|..+++=++|..
T Consensus 4 LP~a~I~ri----~k~~~~~r-is~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkT 55 (68)
T d1htaa_ 4 LPIAPIGRI----IKNAGAER-VSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKT 55 (68)
T ss_dssp SCHHHHHHH----HHHTTCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CcHHHHHHH----HHHCCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 455566665 44457776 89999999999999999999999999999888876
Done!