BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014587
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZG9|FKB53_ARATH Peptidyl-prolyl cis-trans isomerase FKBP53 OS=Arabidopsis thaliana
GN=FKBP53 PE=1 SV=1
Length = 477
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 55/74 (74%)
Query: 344 SVMVTENSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVF 403
S V + + A+ K S +RT PNGL++++L GKP+GK A PGK +SV Y GKL++NG++F
Sbjct: 348 SGTVEKQTPADSKSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIF 407
Query: 404 DSNLGSTPLKFHLG 417
DSN+G +P KF LG
Sbjct: 408 DSNIGKSPFKFRLG 421
>sp|F4J9Q6|FKB43_ARATH Peptidyl-prolyl cis-trans isomerase FKBP43 OS=Arabidopsis thaliana
GN=FKBP43 PE=2 SV=1
Length = 499
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
RTL NG++I+ + GK DGK A GKK+S+LYTGKLK+ G +FDSNLG PL+F LG
Sbjct: 387 RTLSNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKDTGNLFDSNLGEDPLRFRLG 443
>sp|Q9FLB3|FK153_ARATH Peptidyl-prolyl cis-trans isomerase FKBP15-3 OS=Arabidopsis
thaliana GN=FKBP15-3 PE=2 SV=1
Length = 143
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 347 VTENSSAEGK---LSLLRTLPN--GLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQ 401
++E ++ E K +S+ + P+ GL++++L G P+GK A PGK++SV YTGKL+ NG+
Sbjct: 13 ISEEATVESKAFSISVEKQTPDLDGLIVEELCMGNPNGKKAEPGKRVSVHYTGKLQGNGK 72
Query: 402 VFDSNLGSTPLKFHL 416
+FDS +G + KF L
Sbjct: 73 IFDSTVGKSRYKFRL 87
>sp|P0CP98|FKBP4_CRYNJ FK506-binding protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=FPR4 PE=3
SV=1
Length = 405
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+TLP+GL+I+ + G DG VA GK++ + Y GKL NG+ FD+N P F LG
Sbjct: 297 KTLPSGLIIEDIKIG--DGPVAKTGKRLGMRYIGKLT-NGKQFDANTSGKPFSFVLG 350
>sp|P0CP99|FKBP4_CRYNB FK506-binding protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=FPR4 PE=3 SV=1
Length = 405
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+TLP+GL+I+ + G DG VA GK++ + Y GKL NG+ FD+N P F LG
Sbjct: 297 KTLPSGLIIEDIKIG--DGPVAKTGKRLGMRYIGKLT-NGKQFDANTSGKPFSFVLG 350
>sp|O74191|FKBP4_SCHPO FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fkbp39 PE=1 SV=1
Length = 361
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
RTL G+V+ + TG G A GKK+ + Y GKL ENG+VFD N P F LG
Sbjct: 253 RTLKGGVVVTDVKTG--SGASATNGKKVEMRYIGKL-ENGKVFDKNTKGKPFAFILG 306
>sp|P0C1J6|FKBP4_RHIO9 FK506-binding protein 4 OS=Rhizopus delemar (strain RA 99-880 /
ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=FKBP4 PE=3
SV=1
Length = 382
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 363 LPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
LPNGL+I+ + G +G G+++ + Y GKL NG+VFD N+ P F LG
Sbjct: 275 LPNGLIIEDIKMG--EGASCKNGQRVGMRYIGKLT-NGKVFDKNVSGKPFSFLLG 326
>sp|P54397|FKB39_DROME 39 kDa FK506-binding nuclear protein OS=Drosophila melanogaster
GN=FK506-bp1 PE=1 SV=2
Length = 357
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
RT+ G+ I GK G+ A GK++SV Y G+L+ N + FDS L P KF LG
Sbjct: 247 RTITGGVKIVDQVVGK--GEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALG 301
>sp|Q6FKH7|FKBP3_CANGA FK506-binding protein 3 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FPR3 PE=3
SV=1
Length = 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
RTL G+VI+ G DG A G ++ + Y GKLK NG+VFD N P F LG
Sbjct: 329 RTLEGGVVIEDRTVG--DGPAAKKGDRVGMRYIGKLK-NGKVFDKNTSGKPFVFKLG 382
>sp|Q6CWE8|FKBP3_KLULA FK506-binding protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=FPR3 PE=3 SV=1
Length = 418
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 362 TLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
L G++I+ TGK GK G K+ + Y GKLK NG+VFD N P F+LG
Sbjct: 311 VLEGGIIIEDRVTGK--GKACKKGSKVGMRYIGKLK-NGKVFDKNTSGKPFVFNLG 363
>sp|Q6FSC1|FKBP2_CANGA FK506-binding protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FPR2 PE=3
SV=1
Length = 136
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 382 AAPGKKISVLYTGKLKENGQVFDSNL-GSTPLKFHLG 417
A PG +SV YTG L ENG+VFDS+L + P++F LG
Sbjct: 42 ALPGDMVSVHYTGSLAENGKVFDSSLRRNEPIQFKLG 78
>sp|P0C1B0|FKBP4_EMENI FK506-binding protein 4 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fpr4 PE=3
SV=2
Length = 479
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 366 GLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
G++I GK G AA G +++ Y GKL ENG+VFDSN P F LG
Sbjct: 376 GVIIDDKKLGK--GPAAASGNTVAMRYIGKL-ENGKVFDSNKKGKPFTFKLG 424
>sp|Q756V1|FKBP3_ASHGO FK506-binding protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=FPR3 PE=3 SV=2
Length = 417
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 362 TLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
L G+VI+ G GK A G ++ + Y GKLK NG+VFD N P F LG
Sbjct: 310 ILEGGVVIEDRVVGS--GKAAKKGARVGMRYIGKLK-NGKVFDKNTSGKPFVFKLG 362
>sp|Q1LJ08|PHNC2_RALME Phosphonates import ATP-binding protein PhnC 2 OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=phnC2 PE=3 SV=1
Length = 279
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 328 DSNMETHPLSMDAMSGSVMVTENSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKK 387
DS + HP S+D G +V +S GK +LLR++ NGLV+ G+V+ PG
Sbjct: 21 DSTVALHPTSLDVKQGEFLVLLGASGAGKSTLLRSI-NGLVL------PTKGEVSIPGLA 73
Query: 388 ISVLYTGKLKEN----GQVFDSN 406
V+ L+E+ G VF +
Sbjct: 74 GGVVNAKTLREHRKRCGMVFQQH 96
>sp|P38911|FKBP3_YEAST FK506-binding nuclear protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FPR3 PE=1 SV=2
Length = 411
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+ L G+VI+ G DG A G ++ + Y GKLK NG+VFD N P F LG
Sbjct: 302 KVLEGGIVIEDRTIG--DGPQAKRGARVGMRYIGKLK-NGKVFDKNTSGKPFAFKLG 355
>sp|Q4PIN7|FKBP4_USTMA FK506-binding protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=FPR4 PE=3 SV=1
Length = 375
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 363 LPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
LP+GLVI++ G G G+K+ + Y GKL NG+VFD P F LG
Sbjct: 269 LPSGLVIEEKSAG--SGPPCKAGQKVGMRYVGKL-TNGKVFDQCTSGKPFYFKLG 320
>sp|Q26486|FKBP4_SPOFR 46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda
GN=FKBP46 PE=2 SV=1
Length = 412
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+ + G+ I+ L G G VA GK + V Y G+LK+N ++FD+ + KF LG
Sbjct: 302 KQIAGGVSIEDLKVG--SGPVAKAGKVVMVYYEGRLKQNNKMFDNCVKGPGFKFRLG 356
>sp|Q10175|FKBPH_SCHPO Probable peptidyl-prolyl cis-trans isomerase C27F1.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC27F1.06c PE=1 SV=1
Length = 362
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 376 KPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
K DG A K++S+ Y G+L NG+VFD N+ P F+LG
Sbjct: 267 KGDGPAAKRKKRVSMRYIGRLT-NGKVFDKNITGKPFTFNLG 307
>sp|Q59VR3|FKBP3_CANAL FK506-binding protein 3 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=FPR3 PE=3 SV=1
Length = 426
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 361 RTLPNGLVIQ--KLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+TL G++ + K+G+G A G K+ + Y GKLK NG+VFD N P F LG
Sbjct: 318 KTLLGGVITEDRKIGSGA----TAKSGAKVGIRYIGKLK-NGKVFDKNTSGKPFSFKLG 371
>sp|Q6FK71|FKBP4_CANGA FK506-binding protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FPR4 PE=3
SV=1
Length = 398
Score = 38.9 bits (89), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKF--HLGD 418
+ L G++I+ G +G A G K+ + Y GKLK NG+VFD N P F H G+
Sbjct: 290 QVLEGGVIIEDRKIG--EGPKAKKGSKVGMRYIGKLK-NGKVFDKNTSGKPFYFKLHRGE 346
Query: 419 IL 420
++
Sbjct: 347 VI 348
>sp|Q7SCN0|FKBP4_NEUCR FK506-binding protein 4 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fpr-4
PE=3 SV=1
Length = 467
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 370 QKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
+K+GTG+ A G ++ + Y GKL +NG+VFDSN P F LG
Sbjct: 370 RKVGTGR----AAKNGDRVGMRYIGKL-QNGKVFDSNKKGAPFSFKLG 412
>sp|Q9C5P7|SEC1A_ARATH Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3
Length = 673
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 177 LENGAKPKKKKKVQSKEGTQVEEKGLQNDTETDKIIQNLPVPNEENQKTSNHVENVGSVN 236
+ N A K +++S++G+++ + LQ KI+Q LP E+ K S HVE G +N
Sbjct: 330 MTNFASKNKAAQMRSRDGSELSTRDLQ------KIVQALPQYGEQVDKLSTHVELAGKIN 383
Query: 237 NAKPKKRKRKEQQKSLEADSVDCTNVIKGDKALHDEVKHDRMGQDT 282
R Q LE D ++ GD D + R QDT
Sbjct: 384 RIIRDTGLRDLGQ--LEQD------LVFGDAGAKDVINFLRTNQDT 421
>sp|Q6BSE7|FKBP3_DEBHA FK506-binding protein 3 OS=Debaryomyces hansenii (strain ATCC 36239
/ CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=FPR3
PE=3 SV=1
Length = 437
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 356 KLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFH 415
+TL G+V + TGK G+ A G K+ + Y GKLK NG+VFD N P F
Sbjct: 328 T----KTLLGGVVTEDRKTGK--GQTAKSGNKVGIRYIGKLK-NGKVFDKNTSGKPFVFG 380
Query: 416 LG 417
LG
Sbjct: 381 LG 382
>sp|Q6C4C9|FKBP3_YARLI FK506-binding protein 3 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=FPR3 PE=3 SV=1
Length = 407
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 361 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLG 417
R L G+ I+ G +G A G K+ V Y GKL NG+VFDSN P F +G
Sbjct: 299 RQLEGGVKIEDRTVG--EGPSAKVGSKVGVRYVGKLA-NGKVFDSNSKGKPFYFSVG 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.126 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,788,942
Number of Sequences: 539616
Number of extensions: 7682874
Number of successful extensions: 26310
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 931
Number of HSP's that attempted gapping in prelim test: 23911
Number of HSP's gapped (non-prelim): 2507
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 63 (28.9 bits)