Query 014590
Match_columns 422
No_of_seqs 630 out of 4006
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 06:37:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014590.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014590hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0281 Beta-TrCP (transducin 100.0 2.5E-50 5.4E-55 333.7 25.5 351 20-418 71-479 (499)
2 KOG0271 Notchless-like WD40 re 100.0 1.3E-48 2.8E-53 327.2 26.6 308 102-414 105-479 (480)
3 KOG0286 G-protein beta subunit 100.0 5.9E-41 1.3E-45 272.0 32.2 274 104-414 47-343 (343)
4 KOG0272 U4/U6 small nuclear ri 100.0 6.9E-43 1.5E-47 296.4 21.9 268 109-414 172-458 (459)
5 KOG0274 Cdc4 and related F-box 100.0 3E-41 6.6E-46 314.0 33.2 358 19-419 103-485 (537)
6 KOG0315 G-protein beta subunit 100.0 3.4E-40 7.4E-45 261.7 29.0 258 124-420 12-292 (311)
7 KOG0271 Notchless-like WD40 re 100.0 5.3E-40 1.2E-44 275.5 22.9 264 103-368 148-467 (480)
8 KOG0279 G protein beta subunit 100.0 9.8E-38 2.1E-42 251.7 32.1 283 103-417 6-314 (315)
9 KOG0295 WD40 repeat-containing 100.0 4.3E-39 9.4E-44 268.5 24.9 282 97-415 93-405 (406)
10 KOG0285 Pleiotropic regulator 100.0 7.4E-38 1.6E-42 260.6 25.5 287 98-416 137-439 (460)
11 KOG0272 U4/U6 small nuclear ri 100.0 5.4E-39 1.2E-43 272.8 18.8 235 103-338 208-458 (459)
12 KOG0318 WD40 repeat stress pro 100.0 8.2E-36 1.8E-40 260.1 34.0 307 106-416 184-602 (603)
13 KOG0319 WD40-repeat-containing 100.0 2.1E-36 4.6E-41 273.6 27.2 309 103-417 95-620 (775)
14 KOG0279 G protein beta subunit 100.0 9.3E-36 2E-40 240.4 25.7 237 102-340 53-313 (315)
15 KOG0282 mRNA splicing factor [ 100.0 5.3E-37 1.2E-41 265.0 18.2 275 103-414 205-503 (503)
16 KOG0316 Conserved WD40 repeat- 100.0 7.2E-35 1.6E-39 229.7 26.2 248 103-352 8-269 (307)
17 KOG0284 Polyadenylation factor 100.0 4.3E-36 9.3E-41 254.1 19.1 272 111-418 95-382 (464)
18 KOG0263 Transcription initiati 100.0 1.9E-35 4.2E-40 269.9 22.7 268 104-418 370-651 (707)
19 KOG0293 WD40 repeat-containing 100.0 4E-35 8.7E-40 248.6 22.4 280 104-420 216-517 (519)
20 KOG0645 WD40 repeat protein [G 100.0 1.6E-33 3.5E-38 226.5 30.5 271 103-416 5-311 (312)
21 cd00200 WD40 WD40 domain, foun 100.0 2E-33 4.3E-38 249.5 34.4 272 105-414 2-289 (289)
22 KOG0273 Beta-transducin family 100.0 7.4E-34 1.6E-38 244.7 30.1 263 112-416 235-523 (524)
23 KOG0273 Beta-transducin family 100.0 3.3E-34 7.1E-39 246.9 27.0 275 106-419 173-485 (524)
24 KOG0296 Angio-associated migra 100.0 9.4E-34 2E-38 236.8 27.8 276 102-416 54-398 (399)
25 KOG0265 U5 snRNP-specific prot 100.0 1.3E-33 2.9E-38 230.2 25.8 271 103-412 38-334 (338)
26 KOG0291 WD40-repeat-containing 100.0 1.7E-32 3.7E-37 248.9 33.7 248 105-353 343-625 (893)
27 KOG0313 Microtubule binding pr 100.0 2.7E-33 5.8E-38 235.2 26.0 268 110-416 103-418 (423)
28 KOG0291 WD40-repeat-containing 100.0 4E-32 8.8E-37 246.5 34.5 312 104-417 137-509 (893)
29 KOG0286 G-protein beta subunit 100.0 1.2E-32 2.7E-37 223.7 27.9 241 145-420 48-307 (343)
30 KOG0266 WD40 repeat-containing 100.0 1E-32 2.2E-37 258.0 30.9 277 105-417 151-455 (456)
31 KOG0278 Serine/threonine kinas 100.0 3.9E-34 8.5E-39 227.5 17.4 277 106-420 8-301 (334)
32 KOG0268 Sof1-like rRNA process 100.0 3.9E-34 8.4E-39 238.9 16.9 278 103-420 57-349 (433)
33 KOG0315 G-protein beta subunit 100.0 3.2E-32 7E-37 216.5 26.9 252 100-353 28-301 (311)
34 KOG0263 Transcription initiati 100.0 8.2E-34 1.8E-38 259.3 20.2 201 101-342 440-651 (707)
35 KOG0318 WD40 repeat stress pro 100.0 2.2E-31 4.7E-36 232.5 33.0 239 104-344 51-354 (603)
36 KOG0281 Beta-TrCP (transducin 100.0 3.5E-34 7.5E-39 238.0 13.8 236 103-345 228-482 (499)
37 PLN00181 protein SPA1-RELATED; 100.0 6.7E-31 1.5E-35 263.7 39.0 281 108-415 479-792 (793)
38 KOG0276 Vesicle coat complex C 100.0 1.9E-31 4.2E-36 237.3 25.3 242 107-350 8-267 (794)
39 KOG0285 Pleiotropic regulator 100.0 2.5E-31 5.3E-36 221.8 22.2 225 195-421 155-394 (460)
40 KOG0295 WD40 repeat-containing 100.0 6.4E-32 1.4E-36 225.8 18.3 236 102-339 140-405 (406)
41 KOG0306 WD40-repeat-containing 100.0 4.1E-31 8.9E-36 239.9 23.9 265 106-417 367-665 (888)
42 KOG0278 Serine/threonine kinas 100.0 4.1E-32 9E-37 216.0 13.7 241 101-344 48-301 (334)
43 KOG0265 U5 snRNP-specific prot 100.0 1.2E-30 2.7E-35 212.9 22.6 234 103-337 81-335 (338)
44 KOG0284 Polyadenylation factor 100.0 5.1E-32 1.1E-36 229.5 14.9 227 152-417 97-338 (464)
45 KOG0283 WD40 repeat-containing 100.0 8.1E-31 1.8E-35 241.7 23.3 279 104-418 258-578 (712)
46 KOG0306 WD40-repeat-containing 100.0 1E-29 2.2E-34 230.8 28.8 315 103-419 98-583 (888)
47 KOG0319 WD40-repeat-containing 100.0 1.8E-30 3.9E-35 235.4 22.9 269 101-371 312-618 (775)
48 KOG0316 Conserved WD40 repeat- 100.0 6.7E-30 1.4E-34 201.7 22.2 235 146-419 11-260 (307)
49 KOG0643 Translation initiation 100.0 1.3E-29 2.9E-34 203.6 24.3 285 107-417 5-318 (327)
50 KOG0292 Vesicle coat complex C 100.0 1.8E-29 3.9E-34 233.1 26.3 252 107-360 4-300 (1202)
51 KOG1446 Histone H3 (Lys4) meth 100.0 8.9E-28 1.9E-32 198.0 32.7 277 104-418 6-305 (311)
52 KOG0266 WD40 repeat-containing 100.0 4.7E-29 1E-33 233.5 28.5 234 152-419 160-412 (456)
53 KOG0296 Angio-associated migra 100.0 3.5E-29 7.6E-34 209.6 24.1 236 102-340 96-398 (399)
54 KOG0274 Cdc4 and related F-box 100.0 3.3E-29 7.2E-34 233.7 26.6 241 103-350 239-492 (537)
55 KOG0643 Translation initiation 100.0 3.7E-29 7.9E-34 201.1 22.7 242 97-340 36-317 (327)
56 KOG0275 Conserved WD40 repeat- 100.0 5E-30 1.1E-34 211.6 17.5 267 110-414 211-507 (508)
57 KOG0288 WD40 repeat protein Ti 100.0 2.3E-30 5E-35 219.8 15.9 272 105-414 168-459 (459)
58 KOG0277 Peroxisomal targeting 100.0 3.1E-29 6.7E-34 200.2 20.7 245 131-415 37-308 (311)
59 KOG0294 WD40 repeat-containing 100.0 1.2E-28 2.6E-33 202.7 23.6 238 104-419 35-284 (362)
60 KOG0282 mRNA splicing factor [ 100.0 8.5E-30 1.8E-34 220.6 17.6 239 98-338 244-503 (503)
61 PLN00181 protein SPA1-RELATED; 100.0 6.4E-28 1.4E-32 242.3 33.3 250 131-418 457-740 (793)
62 KOG0301 Phospholipase A2-activ 100.0 3.2E-28 7E-33 219.4 27.7 271 103-417 5-289 (745)
63 KOG1407 WD40 repeat protein [F 100.0 4.1E-28 8.8E-33 194.5 25.0 243 106-350 14-271 (313)
64 KOG0300 WD40 repeat-containing 100.0 7E-29 1.5E-33 204.3 19.5 282 103-419 139-479 (481)
65 KOG0293 WD40 repeat-containing 100.0 6.2E-29 1.3E-33 211.2 19.7 236 103-340 260-513 (519)
66 cd00200 WD40 WD40 domain, foun 100.0 1.2E-26 2.7E-31 205.8 31.2 234 104-338 43-289 (289)
67 KOG0772 Uncharacterized conser 100.0 1E-27 2.3E-32 209.2 23.0 273 105-414 160-485 (641)
68 KOG1036 Mitotic spindle checkp 100.0 6.2E-27 1.3E-31 192.2 26.1 239 112-353 13-275 (323)
69 KOG0310 Conserved WD40 repeat- 100.0 2.4E-27 5.2E-32 205.8 24.5 268 108-417 22-310 (487)
70 KOG1446 Histone H3 (Lys4) meth 100.0 2.3E-26 4.9E-31 189.8 28.8 237 151-421 14-267 (311)
71 PTZ00420 coronin; Provisional 100.0 2.2E-26 4.7E-31 215.6 32.3 217 128-418 50-295 (568)
72 KOG0276 Vesicle coat complex C 100.0 1.2E-26 2.7E-31 206.9 28.9 245 102-348 45-306 (794)
73 KOG1539 WD repeat protein [Gen 100.0 1.3E-26 2.9E-31 213.1 29.7 314 101-419 191-609 (910)
74 KOG0313 Microtubule binding pr 100.0 4.4E-27 9.5E-32 198.0 22.8 242 96-340 128-418 (423)
75 KOG0640 mRNA cleavage stimulat 100.0 8.5E-27 1.8E-31 191.4 23.7 278 103-416 103-426 (430)
76 KOG0639 Transducin-like enhanc 100.0 1.7E-27 3.6E-32 207.3 20.5 267 110-416 417-704 (705)
77 KOG0305 Anaphase promoting com 100.0 1.5E-26 3.3E-31 208.2 27.1 255 124-417 190-462 (484)
78 PTZ00421 coronin; Provisional 100.0 4.3E-26 9.4E-31 212.7 31.1 205 107-350 70-300 (493)
79 KOG0645 WD40 repeat protein [G 100.0 4.6E-26 1E-30 183.7 25.8 228 109-340 58-311 (312)
80 KOG0289 mRNA splicing factor [ 100.0 1.1E-26 2.4E-31 198.7 22.8 260 113-415 220-505 (506)
81 KOG1407 WD40 repeat protein [F 100.0 2E-26 4.3E-31 184.9 22.3 231 152-420 21-265 (313)
82 KOG1408 WD40 repeat protein [F 100.0 1.4E-26 2.9E-31 209.6 23.8 274 104-417 361-714 (1080)
83 KOG0641 WD40 repeat protein [G 100.0 5E-25 1.1E-29 173.3 29.3 275 108-416 28-349 (350)
84 KOG0305 Anaphase promoting com 100.0 3.2E-26 6.9E-31 206.1 24.8 231 111-342 216-463 (484)
85 KOG2106 Uncharacterized conser 100.0 5.9E-25 1.3E-29 191.6 31.7 304 107-415 240-625 (626)
86 PTZ00421 coronin; Provisional 100.0 1.5E-25 3.2E-30 209.1 30.1 190 194-419 78-293 (493)
87 KOG0647 mRNA export protein (c 100.0 5.3E-26 1.1E-30 186.1 23.5 256 110-368 25-309 (347)
88 KOG0292 Vesicle coat complex C 100.0 8.3E-26 1.8E-30 209.1 27.4 243 103-347 42-328 (1202)
89 KOG0288 WD40 repeat protein Ti 99.9 5.2E-27 1.1E-31 199.5 16.2 232 102-337 209-458 (459)
90 KOG0308 Conserved WD40 repeat- 99.9 1.3E-26 2.9E-31 207.7 17.5 233 110-418 19-287 (735)
91 KOG0264 Nucleosome remodeling 99.9 1E-25 2.2E-30 194.2 21.5 261 104-416 116-404 (422)
92 KOG0973 Histone transcription 99.9 2.5E-25 5.3E-30 210.9 25.2 274 108-418 8-357 (942)
93 KOG0299 U3 snoRNP-associated p 99.9 3.8E-25 8.3E-30 190.8 23.6 267 105-419 135-413 (479)
94 KOG2096 WD40 repeat protein [G 99.9 7.8E-25 1.7E-29 180.6 23.9 272 103-414 77-400 (420)
95 KOG1539 WD repeat protein [Gen 99.9 2.5E-24 5.5E-29 198.2 28.6 184 194-415 451-647 (910)
96 KOG1274 WD40 repeat protein [G 99.9 2.7E-24 5.9E-29 200.1 27.9 231 109-341 10-263 (933)
97 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3.8E-23 8.1E-28 185.5 33.9 257 124-419 3-282 (300)
98 KOG0289 mRNA splicing factor [ 99.9 1.9E-24 4.1E-29 185.2 21.7 235 104-339 253-505 (506)
99 KOG0640 mRNA cleavage stimulat 99.9 3.8E-25 8.3E-30 181.7 16.7 209 152-419 113-338 (430)
100 KOG0650 WD40 repeat nucleolar 99.9 4.8E-24 1E-28 189.6 22.8 296 104-413 392-732 (733)
101 KOG0277 Peroxisomal targeting 99.9 1.6E-24 3.5E-29 173.3 17.1 227 111-339 59-308 (311)
102 PTZ00420 coronin; Provisional 99.9 4.7E-23 1E-27 193.3 29.4 217 104-322 66-318 (568)
103 KOG0646 WD40 repeat protein [G 99.9 8E-24 1.7E-28 183.1 22.2 268 128-418 13-309 (476)
104 KOG0310 Conserved WD40 repeat- 99.9 3.5E-24 7.5E-29 186.3 20.0 228 108-340 64-309 (487)
105 KOG2055 WD40 repeat protein [G 99.9 1.1E-23 2.4E-28 181.9 22.9 287 95-416 190-512 (514)
106 KOG0275 Conserved WD40 repeat- 99.9 2.9E-24 6.3E-29 177.7 17.9 235 152-419 214-470 (508)
107 KOG0299 U3 snoRNP-associated p 99.9 9.6E-24 2.1E-28 182.2 21.0 215 109-329 199-444 (479)
108 KOG1063 RNA polymerase II elon 99.9 3.7E-23 7.9E-28 187.0 25.5 282 103-418 182-650 (764)
109 KOG4283 Transcription-coupled 99.9 7.2E-23 1.6E-27 167.3 24.6 273 107-416 38-365 (397)
110 KOG0301 Phospholipase A2-activ 99.9 9.9E-24 2.1E-28 190.7 21.5 227 104-340 49-288 (745)
111 KOG1408 WD40 repeat protein [F 99.9 1.9E-23 4.2E-28 189.4 23.4 215 205-420 338-630 (1080)
112 KOG1332 Vesicle coat complex C 99.9 8.9E-24 1.9E-28 168.1 18.3 225 194-420 14-290 (299)
113 KOG2445 Nuclear pore complex c 99.9 1.1E-22 2.4E-27 167.2 25.1 254 109-418 10-320 (361)
114 KOG2048 WD40 repeat protein [G 99.9 7.1E-22 1.5E-26 178.4 31.2 238 105-344 18-279 (691)
115 KOG2106 Uncharacterized conser 99.9 9.9E-22 2.2E-26 171.7 30.2 273 104-415 146-520 (626)
116 KOG0646 WD40 repeat protein [G 99.9 1.8E-23 3.9E-28 180.9 19.2 227 122-350 50-317 (476)
117 KOG0283 WD40 repeat-containing 99.9 1.7E-23 3.7E-28 193.7 20.0 196 103-298 360-577 (712)
118 KOG0772 Uncharacterized conser 99.9 2.3E-23 5.1E-28 182.2 19.7 202 146-348 161-403 (641)
119 KOG1036 Mitotic spindle checkp 99.9 1.9E-22 4.2E-27 165.9 22.2 219 109-330 51-294 (323)
120 KOG0269 WD40 repeat-containing 99.9 2.8E-23 6.1E-28 190.0 19.1 260 153-416 41-340 (839)
121 KOG0647 mRNA export protein (c 99.9 2.9E-22 6.2E-27 164.4 23.0 236 152-419 28-284 (347)
122 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 5.6E-21 1.2E-25 171.4 32.0 246 102-351 21-290 (300)
123 KOG0308 Conserved WD40 repeat- 99.9 5E-23 1.1E-27 184.9 17.9 303 104-419 65-396 (735)
124 KOG0268 Sof1-like rRNA process 99.9 3.6E-23 7.7E-28 173.6 14.9 242 103-348 100-353 (433)
125 KOG0321 WD40 repeat-containing 99.9 2.8E-22 6E-27 179.8 21.4 277 105-417 40-392 (720)
126 KOG0270 WD40 repeat-containing 99.9 3.6E-22 7.8E-27 171.9 20.2 222 162-418 191-451 (463)
127 KOG4283 Transcription-coupled 99.9 5.9E-22 1.3E-26 162.0 18.3 196 203-421 56-281 (397)
128 KOG0302 Ribosome Assembly prot 99.9 6.4E-22 1.4E-26 166.9 19.0 211 107-341 146-379 (440)
129 KOG1332 Vesicle coat complex C 99.9 8.4E-22 1.8E-26 157.0 18.4 231 108-340 7-286 (299)
130 KOG0641 WD40 repeat protein [G 99.9 3.3E-20 7.2E-25 146.3 26.6 234 104-340 81-349 (350)
131 KOG0267 Microtubule severing p 99.9 1.6E-23 3.4E-28 190.2 8.9 220 106-366 22-252 (825)
132 KOG2048 WD40 repeat protein [G 99.9 7.9E-21 1.7E-25 171.7 26.1 230 151-419 25-278 (691)
133 KOG0973 Histone transcription 99.9 2.2E-21 4.7E-26 184.4 22.3 231 189-420 11-316 (942)
134 KOG0322 G-protein beta subunit 99.9 6.8E-22 1.5E-26 159.2 14.9 237 102-339 4-322 (323)
135 KOG0264 Nucleosome remodeling 99.9 2.3E-21 4.9E-26 167.6 19.0 196 105-340 170-404 (422)
136 KOG1274 WD40 repeat protein [G 99.9 1.5E-20 3.3E-25 175.5 25.6 231 152-417 14-263 (933)
137 KOG0300 WD40 repeat-containing 99.9 5.6E-22 1.2E-26 163.8 14.4 181 201-418 158-388 (481)
138 KOG0269 WD40 repeat-containing 99.9 3.9E-22 8.4E-27 182.6 14.3 225 117-342 92-342 (839)
139 KOG4378 Nuclear protein COP1 [ 99.9 5.6E-21 1.2E-25 166.7 20.8 252 131-420 11-284 (673)
140 KOG1445 Tumor-specific antigen 99.9 3.1E-21 6.8E-26 173.0 17.8 131 104-234 71-214 (1012)
141 KOG1063 RNA polymerase II elon 99.9 4.9E-20 1.1E-24 167.0 24.5 277 104-415 46-390 (764)
142 KOG1034 Transcriptional repres 99.9 2.8E-20 6E-25 154.5 20.9 270 106-415 32-382 (385)
143 KOG0639 Transducin-like enhanc 99.9 2.7E-21 5.9E-26 168.9 14.7 228 155-421 423-668 (705)
144 KOG0267 Microtubule severing p 99.9 4E-22 8.7E-27 181.2 8.9 178 203-417 40-227 (825)
145 KOG0294 WD40 repeat-containing 99.9 9.2E-20 2E-24 150.6 20.1 192 187-418 37-239 (362)
146 KOG1240 Protein kinase contain 99.9 4E-19 8.6E-24 170.7 26.7 319 96-414 1032-1431(1431)
147 KOG0302 Ribosome Assembly prot 99.9 6.7E-20 1.5E-24 154.8 18.4 175 206-418 168-380 (440)
148 KOG1188 WD40 repeat protein [G 99.9 2E-19 4.3E-24 150.3 20.6 258 124-415 42-345 (376)
149 KOG4328 WD40 protein [Function 99.9 3.8E-19 8.2E-24 154.0 23.0 244 105-350 179-460 (498)
150 KOG1273 WD40 repeat protein [G 99.8 7.5E-19 1.6E-23 145.3 22.6 268 115-421 26-327 (405)
151 KOG2919 Guanine nucleotide-bin 99.8 3.9E-19 8.3E-24 147.5 20.4 228 157-417 55-328 (406)
152 KOG2055 WD40 repeat protein [G 99.8 4.1E-19 8.9E-24 153.9 21.2 234 105-340 250-512 (514)
153 KOG0270 WD40 repeat-containing 99.8 6.1E-20 1.3E-24 158.2 15.4 196 107-303 238-455 (463)
154 KOG0307 Vesicle coat complex C 99.8 3.5E-20 7.6E-25 177.1 15.2 254 129-419 36-330 (1049)
155 KOG0321 WD40 repeat-containing 99.8 3.6E-19 7.8E-24 160.0 20.3 238 105-342 93-393 (720)
156 KOG4378 Nuclear protein COP1 [ 99.8 1.3E-19 2.8E-24 158.3 16.6 198 124-322 93-305 (673)
157 KOG1334 WD40 repeat protein [G 99.8 4.5E-20 9.8E-25 160.8 13.1 281 103-420 133-470 (559)
158 KOG1273 WD40 repeat protein [G 99.8 7.3E-18 1.6E-22 139.5 21.2 235 106-342 59-324 (405)
159 KOG0642 Cell-cycle nuclear pro 99.8 8.7E-19 1.9E-23 155.6 16.4 205 107-352 289-573 (577)
160 KOG2096 WD40 repeat protein [G 99.8 1.1E-17 2.4E-22 138.6 21.2 191 147-340 81-308 (420)
161 KOG1538 Uncharacterized conser 99.8 1.6E-18 3.5E-23 156.7 17.7 234 101-340 42-293 (1081)
162 KOG4227 WD40 repeat protein [G 99.8 9.3E-18 2E-22 142.8 20.1 291 104-415 48-386 (609)
163 KOG1963 WD40 repeat protein [G 99.8 1.7E-16 3.8E-21 148.2 28.8 246 102-348 47-383 (792)
164 KOG2919 Guanine nucleotide-bin 99.8 1.2E-17 2.7E-22 138.6 18.6 207 124-331 125-361 (406)
165 KOG0649 WD40 repeat protein [G 99.8 2.3E-17 5E-22 131.8 19.1 214 198-416 17-274 (325)
166 KOG0649 WD40 repeat protein [G 99.8 1.1E-16 2.4E-21 127.9 22.7 217 99-350 49-283 (325)
167 KOG4328 WD40 protein [Function 99.8 9.4E-18 2E-22 145.4 17.8 237 103-340 225-495 (498)
168 COG2319 FOG: WD40 repeat [Gene 99.8 1.9E-15 4.2E-20 141.9 35.5 275 107-418 60-361 (466)
169 KOG1517 Guanine nucleotide bin 99.8 1.7E-16 3.7E-21 150.7 26.4 275 113-419 1065-1384(1387)
170 KOG2394 WD40 protein DMR-N9 [G 99.8 2.4E-17 5.3E-22 145.7 19.3 205 157-362 129-384 (636)
171 KOG0307 Vesicle coat complex C 99.8 2.3E-18 5.1E-23 164.8 13.8 229 114-343 66-330 (1049)
172 KOG0303 Actin-binding protein 99.8 6.9E-17 1.5E-21 137.6 20.4 158 185-343 76-252 (472)
173 PRK11028 6-phosphogluconolacto 99.8 2.1E-15 4.5E-20 136.9 30.9 258 125-417 5-305 (330)
174 KOG2445 Nuclear pore complex c 99.8 2E-16 4.3E-21 130.7 21.3 191 192-417 14-257 (361)
175 KOG0644 Uncharacterized conser 99.8 9.3E-19 2E-23 161.9 8.3 256 104-366 182-452 (1113)
176 KOG2110 Uncharacterized conser 99.8 1.6E-15 3.4E-20 128.5 26.6 222 157-417 11-249 (391)
177 KOG2110 Uncharacterized conser 99.8 4.4E-15 9.5E-20 125.8 29.2 225 113-343 6-251 (391)
178 KOG1007 WD repeat protein TSSC 99.8 5.6E-16 1.2E-20 127.0 22.8 286 124-420 28-365 (370)
179 KOG1538 Uncharacterized conser 99.8 1.6E-16 3.4E-21 144.0 21.4 259 114-416 14-293 (1081)
180 KOG0290 Conserved WD40 repeat- 99.7 3E-16 6.5E-21 128.6 19.6 239 102-342 35-320 (364)
181 KOG1009 Chromatin assembly com 99.7 6.2E-16 1.3E-20 132.4 21.9 270 112-419 13-375 (434)
182 KOG1445 Tumor-specific antigen 99.7 1.2E-16 2.6E-21 144.0 17.5 232 157-422 585-850 (1012)
183 KOG1517 Guanine nucleotide bin 99.7 2.9E-16 6.2E-21 149.2 20.7 227 113-342 1110-1383(1387)
184 KOG1007 WD repeat protein TSSC 99.7 2.3E-16 5E-21 129.2 16.4 230 104-340 114-361 (370)
185 COG2319 FOG: WD40 repeat [Gene 99.7 7.5E-14 1.6E-18 131.1 35.7 277 102-417 145-443 (466)
186 KOG1034 Transcriptional repres 99.7 1.2E-16 2.6E-21 133.1 14.3 228 111-340 88-383 (385)
187 KOG1188 WD40 repeat protein [G 99.7 3.4E-16 7.4E-21 131.1 16.0 181 205-419 42-245 (376)
188 KOG0642 Cell-cycle nuclear pro 99.7 1.7E-16 3.7E-21 141.2 14.8 185 196-418 299-563 (577)
189 KOG1272 WD40-repeat-containing 99.7 6E-17 1.3E-21 140.8 11.4 194 153-350 131-333 (545)
190 KOG0322 G-protein beta subunit 99.7 3.7E-16 8E-21 126.4 15.1 226 152-415 15-322 (323)
191 KOG1587 Cytoplasmic dynein int 99.7 5.3E-15 1.2E-19 137.9 25.1 248 131-416 221-516 (555)
192 KOG1524 WD40 repeat-containing 99.7 1E-15 2.2E-20 135.5 18.9 195 206-412 78-282 (737)
193 KOG0303 Actin-binding protein 99.7 1.6E-15 3.5E-20 129.4 19.2 194 107-300 76-297 (472)
194 KOG0650 WD40 repeat nucleolar 99.7 4.5E-15 9.7E-20 133.1 20.7 222 186-414 396-678 (733)
195 KOG1310 WD40 repeat protein [G 99.7 8.3E-16 1.8E-20 136.4 14.9 210 100-348 38-311 (758)
196 KOG0771 Prolactin regulatory e 99.7 1.7E-15 3.7E-20 130.5 15.1 186 195-417 148-355 (398)
197 KOG3881 Uncharacterized conser 99.7 7.3E-15 1.6E-19 125.4 18.2 239 110-349 53-329 (412)
198 KOG1587 Cytoplasmic dynein int 99.7 1.8E-14 3.9E-19 134.4 22.6 228 111-340 241-516 (555)
199 KOG2111 Uncharacterized conser 99.7 6.6E-14 1.4E-18 116.6 23.2 224 156-418 10-258 (346)
200 KOG1240 Protein kinase contain 99.7 4.4E-14 9.5E-19 136.6 25.4 265 137-420 1034-1338(1431)
201 KOG2321 WD40 repeat protein [G 99.7 3.2E-14 7E-19 127.2 22.7 270 104-416 44-343 (703)
202 KOG1272 WD40-repeat-containing 99.6 3.7E-15 8E-20 129.8 13.7 218 115-338 132-360 (545)
203 KOG1963 WD40 repeat protein [G 99.6 3.2E-13 6.9E-18 126.7 26.6 258 110-367 203-524 (792)
204 PF02239 Cytochrom_D1: Cytochr 99.6 1.9E-12 4.2E-17 117.4 30.8 182 124-305 8-210 (369)
205 PRK01742 tolB translocation pr 99.6 5.8E-14 1.2E-18 131.5 21.3 215 131-353 183-416 (429)
206 PRK11028 6-phosphogluconolacto 99.6 6.3E-13 1.4E-17 120.7 27.2 234 104-340 27-304 (330)
207 KOG0771 Prolactin regulatory e 99.6 1.3E-14 2.8E-19 125.2 15.0 182 116-340 148-354 (398)
208 PRK01742 tolB translocation pr 99.6 7.2E-14 1.6E-18 130.9 21.0 210 105-321 196-426 (429)
209 KOG1523 Actin-related protein 99.6 2.6E-13 5.6E-18 113.1 21.6 224 106-332 4-270 (361)
210 PF02239 Cytochrom_D1: Cytochr 99.6 2.5E-12 5.5E-17 116.7 28.8 247 103-350 27-357 (369)
211 KOG1523 Actin-related protein 99.6 1.9E-13 4.2E-18 113.9 19.4 191 151-343 10-239 (361)
212 KOG0290 Conserved WD40 repeat- 99.6 5.3E-14 1.1E-18 115.6 15.6 182 231-418 94-320 (364)
213 KOG1009 Chromatin assembly com 99.6 2.3E-13 5.1E-18 116.8 19.5 240 103-344 56-376 (434)
214 TIGR03300 assembly_YfgL outer 99.6 7.3E-12 1.6E-16 115.9 30.4 258 119-419 62-341 (377)
215 TIGR03300 assembly_YfgL outer 99.6 4.9E-12 1.1E-16 117.0 29.0 227 120-351 103-349 (377)
216 KOG3881 Uncharacterized conser 99.6 2.6E-13 5.6E-18 116.0 18.3 211 105-316 98-338 (412)
217 KOG1524 WD40 repeat-containing 99.6 1.2E-13 2.7E-18 122.5 16.5 197 124-336 77-282 (737)
218 KOG2394 WD40 protein DMR-N9 [G 99.6 1.5E-13 3.3E-18 122.0 17.0 93 226-319 283-383 (636)
219 KOG2111 Uncharacterized conser 99.6 2.4E-12 5.1E-17 107.5 23.0 181 115-298 51-257 (346)
220 KOG4227 WD40 repeat protein [G 99.6 2.4E-13 5.1E-18 116.3 17.1 294 34-339 18-386 (609)
221 KOG1409 Uncharacterized conser 99.5 1E-12 2.3E-17 110.6 18.5 240 100-342 12-272 (404)
222 PRK03629 tolB translocation pr 99.5 1.2E-11 2.6E-16 115.6 27.8 216 132-353 179-418 (429)
223 KOG4497 Uncharacterized conser 99.5 1.1E-11 2.4E-16 104.0 24.1 226 113-341 49-392 (447)
224 KOG2321 WD40 repeat protein [G 99.5 8.1E-13 1.8E-17 118.4 17.6 232 147-420 47-306 (703)
225 KOG2139 WD40 repeat protein [G 99.5 4.4E-11 9.6E-16 101.6 25.3 225 114-341 100-384 (445)
226 PRK03629 tolB translocation pr 99.5 1.4E-11 3E-16 115.3 24.5 212 106-320 192-427 (429)
227 PRK04922 tolB translocation pr 99.5 2E-11 4.4E-16 114.6 25.3 213 132-350 184-420 (433)
228 PF08662 eIF2A: Eukaryotic tra 99.5 1E-11 2.3E-16 102.4 19.0 129 215-349 41-187 (194)
229 PRK02889 tolB translocation pr 99.5 5E-11 1.1E-15 111.6 25.3 213 132-350 176-412 (427)
230 KOG0644 Uncharacterized conser 99.4 2.7E-13 5.8E-18 126.4 8.7 233 104-346 224-474 (1113)
231 PRK04922 tolB translocation pr 99.4 3.9E-11 8.4E-16 112.7 23.4 214 104-320 195-432 (433)
232 KOG1334 WD40 repeat protein [G 99.4 2.1E-12 4.6E-17 113.5 13.6 250 146-419 136-427 (559)
233 PF12937 F-box-like: F-box-lik 99.4 1E-13 2.2E-18 85.4 3.7 46 24-69 1-46 (47)
234 PRK05137 tolB translocation pr 99.4 2.5E-10 5.3E-15 107.5 27.0 208 132-344 182-416 (435)
235 KOG4547 WD40 repeat-containing 99.4 2E-11 4.3E-16 110.2 17.4 195 124-340 7-220 (541)
236 KOG0974 WD-repeat protein WDR6 99.4 1.6E-11 3.5E-16 117.5 17.7 262 111-417 6-289 (967)
237 PRK11138 outer membrane biogen 99.4 5.3E-10 1.1E-14 103.9 27.4 257 119-415 117-393 (394)
238 KOG4497 Uncharacterized conser 99.4 5E-11 1.1E-15 100.1 17.7 187 156-347 13-247 (447)
239 PRK05137 tolB translocation pr 99.4 3.1E-10 6.6E-15 106.8 25.1 213 104-320 193-432 (435)
240 PRK02889 tolB translocation pr 99.4 1.5E-10 3.3E-15 108.4 22.9 212 105-320 188-424 (427)
241 TIGR02658 TTQ_MADH_Hv methylam 99.4 3.5E-09 7.7E-14 94.1 29.7 214 130-348 75-338 (352)
242 TIGR02658 TTQ_MADH_Hv methylam 99.4 1.5E-08 3.2E-13 90.2 33.4 246 132-419 27-333 (352)
243 KOG1354 Serine/threonine prote 99.4 8.1E-11 1.8E-15 99.4 17.3 230 111-343 24-362 (433)
244 KOG0974 WD-repeat protein WDR6 99.4 4.4E-11 9.6E-16 114.6 17.6 180 157-340 93-288 (967)
245 KOG2315 Predicted translation 99.4 8.5E-10 1.8E-14 99.2 24.5 258 114-416 36-390 (566)
246 KOG1310 WD40 repeat protein [G 99.3 3.3E-11 7.1E-16 107.7 14.8 145 195-340 54-231 (758)
247 PF13360 PQQ_2: PQQ-like domai 99.3 7.5E-09 1.6E-13 89.4 28.7 210 131-347 2-237 (238)
248 PF08662 eIF2A: Eukaryotic tra 99.3 2E-10 4.3E-15 94.8 17.8 147 155-305 9-186 (194)
249 PRK11138 outer membrane biogen 99.3 5.3E-09 1.1E-13 97.3 29.3 224 119-348 66-320 (394)
250 TIGR02800 propeller_TolB tol-p 99.3 2.8E-09 6.1E-14 100.3 27.4 212 132-349 170-405 (417)
251 KOG2139 WD40 repeat protein [G 99.3 2.5E-10 5.4E-15 97.1 17.1 159 206-367 113-295 (445)
252 KOG4547 WD40 repeat-containing 99.3 7.1E-10 1.5E-14 100.3 20.3 174 205-417 7-221 (541)
253 TIGR02800 propeller_TolB tol-p 99.3 1.5E-09 3.4E-14 102.0 23.9 210 105-316 182-415 (417)
254 PF10282 Lactonase: Lactonase, 99.3 8E-08 1.7E-12 87.5 33.9 256 125-417 2-323 (345)
255 PRK00178 tolB translocation pr 99.3 4.8E-09 1E-13 98.9 26.8 211 133-349 180-414 (430)
256 PRK04792 tolB translocation pr 99.3 6.5E-09 1.4E-13 97.8 27.0 212 133-350 199-434 (448)
257 PF10282 Lactonase: Lactonase, 99.3 9.6E-08 2.1E-12 87.0 33.5 233 114-347 38-331 (345)
258 KOG4190 Uncharacterized conser 99.3 4.7E-11 1E-15 107.0 11.0 208 100-350 723-958 (1034)
259 KOG0280 Uncharacterized conser 99.3 2.1E-09 4.6E-14 89.2 19.6 209 131-342 45-286 (339)
260 KOG1064 RAVE (regulator of V-A 99.2 9.2E-11 2E-15 118.1 13.8 192 108-306 2204-2407(2439)
261 KOG1409 Uncharacterized conser 99.2 6.8E-10 1.5E-14 93.9 16.3 217 162-417 36-271 (404)
262 PRK00178 tolB translocation pr 99.2 7.2E-09 1.6E-13 97.7 24.5 213 105-320 191-427 (430)
263 PF13360 PQQ_2: PQQ-like domai 99.2 1.1E-08 2.4E-13 88.3 23.8 208 171-420 2-234 (238)
264 PRK04792 tolB translocation pr 99.2 7.4E-09 1.6E-13 97.4 23.2 208 110-320 215-446 (448)
265 KOG1354 Serine/threonine prote 99.2 2.2E-09 4.7E-14 91.0 16.5 242 153-419 27-362 (433)
266 KOG0280 Uncharacterized conser 99.2 8.4E-09 1.8E-13 85.7 19.3 228 113-342 70-335 (339)
267 COG2706 3-carboxymuconate cycl 99.1 6.7E-07 1.4E-11 77.0 30.3 254 131-418 15-323 (346)
268 KOG2041 WD40 repeat protein [G 99.1 1.3E-08 2.8E-13 94.4 21.1 241 112-356 14-312 (1189)
269 PLN02919 haloacid dehalogenase 99.1 1.8E-07 3.9E-12 96.4 31.8 238 157-419 573-891 (1057)
270 KOG4714 Nucleoporin [Nuclear s 99.1 2E-09 4.4E-14 87.8 13.9 269 104-414 27-316 (319)
271 PRK01029 tolB translocation pr 99.1 1E-07 2.3E-12 89.0 25.2 212 132-346 165-409 (428)
272 PLN02919 haloacid dehalogenase 99.1 3.7E-07 8.1E-12 94.1 31.2 225 117-344 572-892 (1057)
273 PF04762 IKI3: IKI3 family; I 99.1 4E-07 8.7E-12 92.2 30.5 300 111-418 74-458 (928)
274 KOG1064 RAVE (regulator of V-A 99.1 1.6E-09 3.5E-14 109.5 12.9 181 157-350 2214-2408(2439)
275 KOG0309 Conserved WD40 repeat- 99.1 1.9E-09 4.1E-14 100.0 12.2 269 148-417 21-340 (1081)
276 KOG4532 WD40-like repeat conta 99.1 9.1E-08 2E-12 78.7 20.4 186 165-351 86-293 (344)
277 KOG3914 WD repeat protein WDR4 99.0 3.7E-09 8E-14 91.5 12.0 145 239-420 68-227 (390)
278 KOG2041 WD40 repeat protein [G 99.0 4.8E-08 1E-12 90.7 19.3 232 106-340 65-337 (1189)
279 KOG0882 Cyclophilin-related pe 99.0 1.1E-08 2.4E-13 89.8 14.4 238 111-350 8-315 (558)
280 PF15492 Nbas_N: Neuroblastoma 99.0 2.8E-07 6.1E-12 76.9 21.0 193 157-351 3-270 (282)
281 PF00646 F-box: F-box domain; 99.0 4.1E-10 8.9E-15 69.9 3.2 47 23-69 2-48 (48)
282 cd00216 PQQ_DH Dehydrogenases 99.0 1.2E-06 2.6E-11 83.5 28.0 268 120-419 59-427 (488)
283 KOG4190 Uncharacterized conser 98.9 1.8E-09 3.8E-14 97.1 7.3 144 203-350 747-916 (1034)
284 PF08450 SGL: SMP-30/Gluconola 98.9 9.9E-06 2.2E-10 70.2 30.0 189 157-351 5-223 (246)
285 KOG3914 WD repeat protein WDR4 98.9 6.3E-08 1.4E-12 84.0 15.7 143 124-267 76-228 (390)
286 KOG2315 Predicted translation 98.9 5.7E-07 1.2E-11 81.5 22.1 228 116-348 129-397 (566)
287 PRK01029 tolB translocation pr 98.9 5.4E-07 1.2E-11 84.3 23.2 213 106-321 178-425 (428)
288 KOG2695 WD40 repeat protein [G 98.9 4.2E-09 9E-14 89.4 8.1 140 246-418 226-378 (425)
289 COG4946 Uncharacterized protei 98.9 1.6E-06 3.5E-11 77.1 23.8 186 157-346 272-483 (668)
290 COG5170 CDC55 Serine/threonine 98.9 4.4E-08 9.6E-13 82.1 12.8 228 111-340 25-367 (460)
291 KOG4649 PQQ (pyrrolo-quinoline 98.9 2.6E-05 5.6E-10 64.4 29.9 285 124-418 25-353 (354)
292 smart00256 FBOX A Receptor for 98.9 3.1E-09 6.8E-14 63.5 4.1 40 27-66 1-40 (41)
293 PF15492 Nbas_N: Neuroblastoma 98.9 2.7E-06 5.8E-11 71.2 22.2 189 121-309 7-271 (282)
294 KOG4714 Nucleoporin [Nuclear s 98.8 1.8E-07 3.8E-12 76.7 14.7 218 103-338 80-316 (319)
295 KOG2314 Translation initiation 98.8 1.4E-06 3E-11 78.9 21.5 219 117-341 215-526 (698)
296 KOG0309 Conserved WD40 repeat- 98.8 2.1E-08 4.5E-13 93.3 10.0 198 105-341 107-340 (1081)
297 COG4946 Uncharacterized protei 98.8 3.6E-06 7.8E-11 74.9 23.4 196 129-329 284-507 (668)
298 KOG4532 WD40-like repeat conta 98.8 1.5E-06 3.3E-11 71.7 19.5 217 122-340 84-331 (344)
299 KOG1912 WD40 repeat protein [G 98.8 6.4E-09 1.4E-13 97.1 6.6 114 205-319 439-572 (1062)
300 COG5354 Uncharacterized protei 98.8 1.2E-05 2.5E-10 72.4 25.7 234 113-350 72-359 (561)
301 KOG2695 WD40 repeat protein [G 98.8 2.7E-08 6E-13 84.5 8.8 145 207-353 228-389 (425)
302 cd00216 PQQ_DH Dehydrogenases 98.8 1.3E-05 2.7E-10 76.7 27.4 225 120-350 107-434 (488)
303 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.8 4.2E-05 9E-10 73.4 30.8 181 121-302 68-338 (527)
304 PF00400 WD40: WD domain, G-be 98.8 3.2E-08 6.9E-13 58.3 6.2 39 299-338 1-39 (39)
305 PRK04043 tolB translocation pr 98.8 1.9E-05 4.1E-10 73.5 27.1 210 133-349 170-408 (419)
306 PF07433 DUF1513: Protein of u 98.7 2.1E-05 4.5E-10 68.0 24.7 203 124-330 19-276 (305)
307 KOG1275 PAB-dependent poly(A) 98.7 4.8E-07 1.1E-11 86.5 15.0 174 162-338 146-340 (1118)
308 PF00400 WD40: WD domain, G-be 98.7 7.2E-08 1.6E-12 56.7 6.4 36 103-138 2-39 (39)
309 KOG1832 HIV-1 Vpr-binding prot 98.7 2.2E-08 4.8E-13 95.0 6.1 247 104-365 1093-1373(1516)
310 PF08450 SGL: SMP-30/Gluconola 98.7 0.00011 2.4E-09 63.6 28.8 205 117-328 4-243 (246)
311 KOG2314 Translation initiation 98.7 9.7E-06 2.1E-10 73.7 21.4 224 114-340 251-573 (698)
312 KOG1912 WD40 repeat protein [G 98.7 2.8E-06 6.1E-11 80.0 18.4 228 112-341 15-305 (1062)
313 PRK04043 tolB translocation pr 98.6 4.2E-05 9.1E-10 71.3 24.6 181 114-298 189-401 (419)
314 KOG2066 Vacuolar assembly/sort 98.6 2.5E-06 5.5E-11 80.7 16.2 142 199-352 45-199 (846)
315 PF06433 Me-amine-dh_H: Methyl 98.6 8.7E-05 1.9E-09 65.0 24.5 215 131-350 66-330 (342)
316 COG5170 CDC55 Serine/threonine 98.6 2.3E-06 5E-11 72.1 14.1 200 152-353 27-323 (460)
317 COG2706 3-carboxymuconate cycl 98.6 0.00034 7.4E-09 60.7 28.9 233 107-340 34-321 (346)
318 KOG1275 PAB-dependent poly(A) 98.6 1.2E-06 2.5E-11 84.0 12.9 164 245-414 148-340 (1118)
319 PF04762 IKI3: IKI3 family; I 98.5 0.00026 5.7E-09 72.2 30.1 230 107-340 205-519 (928)
320 KOG1645 RING-finger-containing 98.5 1.4E-05 3.1E-10 69.8 16.7 231 107-340 188-461 (463)
321 KOG2120 SCF ubiquitin ligase, 98.5 1.3E-07 2.9E-12 79.5 4.0 49 19-67 93-141 (419)
322 PF07433 DUF1513: Protein of u 98.4 0.0007 1.5E-08 58.7 25.4 194 154-350 7-257 (305)
323 KOG0882 Cyclophilin-related pe 98.4 6E-06 1.3E-10 73.1 12.9 204 101-305 42-313 (558)
324 KOG2066 Vacuolar assembly/sort 98.4 1.8E-05 3.9E-10 75.2 16.3 164 162-340 48-233 (846)
325 KOG1645 RING-finger-containing 98.4 0.0001 2.2E-09 64.6 19.6 78 189-267 191-271 (463)
326 KOG2114 Vacuolar assembly/sort 98.4 5.1E-05 1.1E-09 72.7 19.0 147 195-344 27-204 (933)
327 PRK02888 nitrous-oxide reducta 98.3 0.00018 3.8E-09 68.3 21.7 87 253-341 295-405 (635)
328 PF11768 DUF3312: Protein of u 98.3 0.00025 5.3E-09 65.7 21.9 74 268-344 260-333 (545)
329 KOG2114 Vacuolar assembly/sort 98.3 4.1E-05 8.8E-10 73.4 17.2 192 155-349 27-252 (933)
330 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.3 0.001 2.2E-08 64.0 26.9 231 119-351 117-501 (527)
331 KOG1920 IkappaB kinase complex 98.3 0.00074 1.6E-08 67.6 25.0 216 112-342 68-324 (1265)
332 PF06433 Me-amine-dh_H: Methyl 98.2 0.0035 7.5E-08 55.2 27.9 247 132-419 17-323 (342)
333 KOG4649 PQQ (pyrrolo-quinoline 98.2 0.0024 5.2E-08 53.1 25.2 185 158-349 17-215 (354)
334 COG5354 Uncharacterized protei 98.1 0.00071 1.5E-08 61.3 20.0 189 135-327 15-239 (561)
335 KOG3621 WD40 repeat-containing 98.1 0.00036 7.8E-09 65.8 18.0 195 151-350 33-255 (726)
336 KOG2997 F-box protein FBX9 [Ge 98.0 3.7E-06 8E-11 71.3 3.6 51 23-73 106-161 (366)
337 KOG3621 WD40 repeat-containing 98.0 0.0015 3.3E-08 61.7 20.8 137 116-252 39-189 (726)
338 PRK02888 nitrous-oxide reducta 98.0 0.00083 1.8E-08 63.9 18.2 193 130-329 213-450 (635)
339 PF00780 CNH: CNH domain; Int 98.0 0.011 2.4E-07 52.1 25.7 217 122-351 7-266 (275)
340 PF11768 DUF3312: Protein of u 98.0 7.7E-05 1.7E-09 68.9 10.5 68 231-298 257-330 (545)
341 PF04053 Coatomer_WDAD: Coatom 97.9 0.016 3.4E-07 54.3 24.8 135 153-297 34-173 (443)
342 PF05096 Glu_cyclase_2: Glutam 97.9 0.012 2.6E-07 50.1 24.6 171 114-286 46-249 (264)
343 PF04841 Vps16_N: Vps16, N-ter 97.9 0.015 3.3E-07 54.2 24.4 170 173-351 62-257 (410)
344 TIGR03074 PQQ_membr_DH membran 97.9 0.0083 1.8E-07 60.0 23.8 228 121-350 193-487 (764)
345 PF14783 BBS2_Mid: Ciliary BBS 97.9 0.0016 3.4E-08 47.2 13.7 98 115-216 2-109 (111)
346 KOG3617 WD40 and TPR repeat-co 97.8 0.0013 2.9E-08 63.4 16.5 187 155-352 19-231 (1416)
347 PF03178 CPSF_A: CPSF A subuni 97.8 0.0083 1.8E-07 54.3 21.2 203 132-337 2-262 (321)
348 KOG1920 IkappaB kinase complex 97.8 0.013 2.7E-07 59.3 23.3 178 153-339 70-273 (1265)
349 PF14783 BBS2_Mid: Ciliary BBS 97.7 0.0038 8.3E-08 45.2 14.2 84 206-292 18-109 (111)
350 KOG1008 Uncharacterized conser 97.7 1.1E-05 2.4E-10 74.7 1.5 131 206-339 73-224 (783)
351 COG3391 Uncharacterized conser 97.7 0.038 8.2E-07 51.2 26.3 219 133-353 54-296 (381)
352 PF08553 VID27: VID27 cytoplas 97.7 0.006 1.3E-07 60.4 19.7 136 125-261 497-646 (794)
353 KOG4640 Anaphase-promoting com 97.7 0.00025 5.5E-09 65.9 9.7 79 268-348 21-100 (665)
354 KOG1008 Uncharacterized conser 97.7 1.6E-05 3.5E-10 73.6 2.1 184 112-297 56-275 (783)
355 PF00780 CNH: CNH domain; Int 97.7 0.026 5.7E-07 49.7 22.3 139 200-348 4-173 (275)
356 PF08596 Lgl_C: Lethal giant l 97.7 0.022 4.9E-07 52.5 21.6 118 230-348 83-251 (395)
357 COG3386 Gluconolactonase [Carb 97.7 0.038 8.2E-07 49.0 23.8 187 159-351 32-253 (307)
358 PF08553 VID27: VID27 cytoplas 97.7 0.0015 3.3E-08 64.4 14.7 129 208-339 499-646 (794)
359 PHA02713 hypothetical protein; 97.6 0.019 4.1E-07 56.0 21.2 176 203-418 304-535 (557)
360 PF04053 Coatomer_WDAD: Coatom 97.6 0.065 1.4E-06 50.3 23.6 216 105-340 25-262 (443)
361 smart00320 WD40 WD40 repeats. 97.6 0.00022 4.7E-09 40.8 5.1 39 299-338 2-40 (40)
362 PF08596 Lgl_C: Lethal giant l 97.6 0.031 6.6E-07 51.6 21.3 214 98-329 72-325 (395)
363 KOG1832 HIV-1 Vpr-binding prot 97.5 0.00012 2.5E-09 70.7 4.3 142 225-371 1093-1249(1516)
364 PHA02713 hypothetical protein; 97.5 0.021 4.6E-07 55.6 19.6 216 132-351 272-544 (557)
365 PF00930 DPPIV_N: Dipeptidyl p 97.4 0.093 2E-06 48.1 24.3 209 131-340 22-315 (353)
366 KOG3617 WD40 and TPR repeat-co 97.4 0.0041 9E-08 60.2 13.7 66 115-180 62-131 (1416)
367 PF03178 CPSF_A: CPSF A subuni 97.4 0.094 2E-06 47.4 25.0 125 213-340 62-202 (321)
368 PF04841 Vps16_N: Vps16, N-ter 97.3 0.15 3.2E-06 47.7 29.0 182 133-316 62-266 (410)
369 smart00320 WD40 WD40 repeats. 97.3 0.00091 2E-08 38.0 5.4 37 224-260 3-40 (40)
370 PF06977 SdiA-regulated: SdiA- 97.3 0.095 2.1E-06 44.9 22.2 180 154-337 24-247 (248)
371 KOG2395 Protein involved in va 97.2 0.0053 1.1E-07 56.4 11.6 139 124-262 348-500 (644)
372 KOG4341 F-box protein containi 97.2 0.00018 3.9E-09 64.0 2.1 45 23-67 71-115 (483)
373 COG3391 Uncharacterized conser 97.2 0.19 4E-06 46.6 22.8 191 117-308 78-294 (381)
374 TIGR03074 PQQ_membr_DH membran 97.2 0.21 4.6E-06 50.2 23.1 104 203-306 194-353 (764)
375 KOG2395 Protein involved in va 97.1 0.009 2E-07 54.9 12.0 131 206-340 349-500 (644)
376 KOG2444 WD40 repeat protein [G 97.1 0.0013 2.8E-08 53.7 6.0 133 206-341 33-178 (238)
377 KOG1897 Damage-specific DNA bi 97.0 0.43 9.4E-06 47.8 25.3 219 124-348 597-864 (1096)
378 KOG4640 Anaphase-promoting com 97.0 0.0034 7.3E-08 58.7 8.3 84 234-319 21-114 (665)
379 KOG2079 Vacuolar assembly/sort 97.0 0.0041 8.9E-08 61.8 9.1 75 278-353 98-173 (1206)
380 COG3490 Uncharacterized protei 97.0 0.13 2.8E-06 44.0 16.3 200 134-338 93-346 (366)
381 KOG4441 Proteins containing BT 96.9 0.27 5.9E-06 48.0 21.3 175 205-417 335-547 (571)
382 COG3386 Gluconolactonase [Carb 96.9 0.27 5.8E-06 43.8 21.4 202 124-330 39-275 (307)
383 PF12894 Apc4_WD40: Anaphase-p 96.8 0.0048 1E-07 37.3 5.1 33 268-301 12-44 (47)
384 KOG4499 Ca2+-binding protein R 96.7 0.26 5.6E-06 40.9 16.0 94 235-328 159-272 (310)
385 PF02897 Peptidase_S9_N: Proly 96.7 0.58 1.3E-05 44.0 29.8 224 118-345 129-409 (414)
386 KOG2079 Vacuolar assembly/sort 96.7 0.052 1.1E-06 54.4 13.9 103 157-261 93-202 (1206)
387 COG3490 Uncharacterized protei 96.7 0.36 7.7E-06 41.4 23.2 225 113-348 35-318 (366)
388 COG0823 TolB Periplasmic compo 96.7 0.15 3.2E-06 47.7 16.4 173 155-330 196-389 (425)
389 KOG2444 WD40 repeat protein [G 96.7 0.0039 8.5E-08 51.0 5.3 135 125-262 33-177 (238)
390 PF14655 RAB3GAP2_N: Rab3 GTPa 96.6 0.32 7E-06 45.0 18.1 86 268-353 308-411 (415)
391 COG3823 Glutamine cyclotransfe 96.6 0.14 3E-06 41.6 13.5 166 117-285 50-247 (262)
392 PF06977 SdiA-regulated: SdiA- 96.6 0.42 9E-06 41.0 20.8 187 105-294 14-247 (248)
393 KOG4499 Ca2+-binding protein R 96.6 0.36 7.8E-06 40.1 17.9 118 235-353 110-254 (310)
394 KOG4441 Proteins containing BT 96.5 0.36 7.8E-06 47.2 18.6 180 116-298 326-547 (571)
395 COG0823 TolB Periplasmic compo 96.5 0.38 8.3E-06 45.0 18.1 154 132-286 218-388 (425)
396 PRK13616 lipoprotein LpqB; Pro 96.4 0.24 5.2E-06 48.5 16.4 98 234-336 350-472 (591)
397 PF05096 Glu_cyclase_2: Glutam 96.3 0.57 1.2E-05 40.2 25.4 181 143-329 34-249 (264)
398 PF14727 PHTB1_N: PTHB1 N-term 96.3 0.91 2E-05 42.2 28.3 135 124-261 39-203 (418)
399 PF14583 Pectate_lyase22: Olig 96.3 0.83 1.8E-05 41.5 23.2 232 138-371 16-301 (386)
400 PHA03098 kelch-like protein; P 96.2 0.65 1.4E-05 45.4 18.9 176 121-299 293-513 (534)
401 PHA03098 kelch-like protein; P 96.2 0.71 1.5E-05 45.1 19.1 94 205-299 297-416 (534)
402 COG1520 FOG: WD40-like repeat 96.1 1.1 2.5E-05 41.3 29.0 189 120-308 66-279 (370)
403 PF14583 Pectate_lyase22: Olig 96.0 1.2 2.6E-05 40.5 33.9 227 101-331 19-303 (386)
404 KOG3926 F-box proteins [Amino 95.9 0.0081 1.7E-07 50.2 3.5 51 22-72 200-251 (332)
405 KOG2280 Vacuolar assembly/sort 95.9 0.42 9.1E-06 46.5 14.9 174 131-306 63-255 (829)
406 PF12894 Apc4_WD40: Anaphase-p 95.9 0.031 6.7E-07 33.8 5.0 35 309-345 11-45 (47)
407 PF06881 Elongin_A: RNA polyme 95.8 0.028 6E-07 41.4 5.6 65 23-89 3-72 (109)
408 KOG2247 WD40 repeat-containing 95.8 0.0018 3.9E-08 58.8 -0.8 132 124-256 48-182 (615)
409 PHA02790 Kelch-like protein; P 95.5 1.8 4E-05 41.5 18.4 93 206-299 275-386 (480)
410 PF14781 BBS2_N: Ciliary BBSom 95.3 0.93 2E-05 34.3 14.0 106 124-229 12-133 (136)
411 PRK13616 lipoprotein LpqB; Pro 95.2 2.6 5.7E-05 41.4 18.3 170 153-332 351-560 (591)
412 KOG3630 Nuclear pore complex, 95.1 0.35 7.5E-06 49.2 11.8 116 206-322 117-256 (1405)
413 COG1520 FOG: WD40-like repeat 94.9 3.2 7E-05 38.3 22.4 191 159-351 65-279 (370)
414 PHA02790 Kelch-like protein; P 94.8 4 8.7E-05 39.2 19.2 142 121-266 270-427 (480)
415 PF13013 F-box-like_2: F-box-l 94.7 0.057 1.2E-06 39.3 4.1 30 23-52 21-50 (109)
416 COG5167 VID27 Protein involved 94.5 0.67 1.4E-05 43.1 11.2 137 124-262 482-632 (776)
417 COG3823 Glutamine cyclotransfe 94.3 2.5 5.4E-05 34.7 14.5 182 143-328 35-247 (262)
418 KOG1916 Nuclear protein, conta 94.2 0.065 1.4E-06 52.8 4.5 116 205-345 197-328 (1283)
419 PF02897 Peptidase_S9_N: Proly 94.1 5.2 0.00011 37.6 27.9 191 156-349 128-366 (414)
420 PF12234 Rav1p_C: RAVE protein 94.1 1.9 4.1E-05 42.2 14.1 70 270-339 32-103 (631)
421 PF07569 Hira: TUP1-like enhan 93.6 0.75 1.6E-05 38.8 9.4 69 115-183 15-98 (219)
422 COG5167 VID27 Protein involved 93.6 6.6 0.00014 36.9 16.2 131 206-340 483-632 (776)
423 PF08728 CRT10: CRT10; InterP 93.6 5.8 0.00013 39.4 16.3 112 269-415 102-245 (717)
424 PF05694 SBP56: 56kDa selenium 93.5 6.3 0.00014 36.5 21.7 175 124-298 89-343 (461)
425 PF08728 CRT10: CRT10; InterP 93.5 6.6 0.00014 39.1 16.6 103 194-297 103-246 (717)
426 COG3204 Uncharacterized protei 93.3 5 0.00011 34.9 14.3 109 231-340 83-210 (316)
427 PF00930 DPPIV_N: Dipeptidyl p 93.2 6.8 0.00015 35.9 21.0 185 160-350 1-228 (353)
428 PLN03215 ascorbic acid mannose 93.1 0.096 2.1E-06 47.4 3.5 38 23-60 3-41 (373)
429 PF14655 RAB3GAP2_N: Rab3 GTPa 93.0 7.7 0.00017 36.2 26.1 44 310-354 308-351 (415)
430 PF10313 DUF2415: Uncharacteri 92.8 0.5 1.1E-05 27.7 5.0 31 268-298 1-34 (43)
431 PF12234 Rav1p_C: RAVE protein 92.6 2.2 4.8E-05 41.7 12.0 88 208-297 46-156 (631)
432 PF10168 Nup88: Nuclear pore c 92.5 2.3 5.1E-05 42.7 12.5 73 268-342 85-181 (717)
433 PF10313 DUF2415: Uncharacteri 92.3 0.78 1.7E-05 26.9 5.3 32 310-342 1-35 (43)
434 PF07569 Hira: TUP1-like enhan 92.2 1.9 4.1E-05 36.4 9.9 64 277-342 20-97 (219)
435 PF05694 SBP56: 56kDa selenium 92.0 10 0.00022 35.2 17.6 107 245-352 88-242 (461)
436 PF03022 MRJP: Major royal jel 92.0 7.3 0.00016 34.5 13.8 126 214-341 35-216 (287)
437 KOG1897 Damage-specific DNA bi 92.0 16 0.00035 37.4 26.7 165 214-416 751-942 (1096)
438 PF14761 HPS3_N: Hermansky-Pud 90.9 8.3 0.00018 32.0 12.7 56 280-337 29-92 (215)
439 PF14870 PSII_BNR: Photosynthe 90.9 11 0.00024 33.5 25.9 135 199-337 152-301 (302)
440 KOG1900 Nuclear pore complex, 90.8 4.9 0.00011 42.2 12.6 130 210-341 96-273 (1311)
441 PRK14131 N-acetylneuraminic ac 90.8 14 0.0003 34.3 21.6 40 213-252 189-230 (376)
442 COG5276 Uncharacterized conser 90.2 12 0.00026 32.7 23.3 151 113-265 87-244 (370)
443 PF11715 Nup160: Nucleoporin N 90.2 1.6 3.5E-05 42.8 8.9 39 311-350 216-258 (547)
444 KOG1916 Nuclear protein, conta 90.2 0.3 6.5E-06 48.4 3.5 126 212-340 110-265 (1283)
445 TIGR03547 muta_rot_YjhT mutatr 90.1 15 0.00032 33.6 20.3 40 213-252 168-209 (346)
446 KOG3630 Nuclear pore complex, 90.0 2.5 5.4E-05 43.5 9.6 114 235-350 102-237 (1405)
447 KOG2063 Vacuolar assembly/sort 90.0 17 0.00036 37.3 15.4 68 117-184 21-100 (877)
448 TIGR03118 PEPCTERM_chp_1 conse 89.7 14 0.00029 32.6 20.9 146 206-353 103-292 (336)
449 PF14269 Arylsulfotran_2: Aryl 89.6 15 0.00032 32.8 13.7 71 268-339 144-219 (299)
450 COG5276 Uncharacterized conser 89.5 14 0.0003 32.3 27.3 176 162-340 95-285 (370)
451 COG4590 ABC-type uncharacteriz 89.5 2.9 6.3E-05 38.5 8.9 148 157-305 226-394 (733)
452 PF14870 PSII_BNR: Photosynthe 89.4 15 0.00033 32.7 30.6 113 231-347 142-267 (302)
453 KOG4460 Nuclear pore complex, 89.1 4.8 0.0001 37.9 10.0 78 268-346 104-204 (741)
454 PF10168 Nup88: Nuclear pore c 88.7 15 0.00032 37.2 14.1 92 310-419 85-182 (717)
455 PF02333 Phytase: Phytase; In 88.3 21 0.00045 32.9 22.4 130 206-340 71-237 (381)
456 PF10647 Gmad1: Lipoprotein Lp 88.2 16 0.00035 31.6 17.3 167 212-408 1-187 (253)
457 smart00564 PQQ beta-propeller 88.1 1.9 4.1E-05 23.4 4.6 28 121-148 5-32 (33)
458 TIGR02276 beta_rpt_yvtn 40-res 87.2 3.8 8.2E-05 23.6 5.8 36 124-159 6-41 (42)
459 KOG1983 Tomosyn and related SN 87.2 18 0.00039 38.2 14.1 33 151-183 35-68 (993)
460 TIGR02276 beta_rpt_yvtn 40-res 86.9 3.9 8.4E-05 23.5 5.8 31 277-307 1-32 (42)
461 PF15390 DUF4613: Domain of un 86.8 31 0.00068 33.4 14.0 106 234-340 20-142 (671)
462 TIGR02604 Piru_Ver_Nterm putat 86.7 26 0.00057 32.3 14.2 58 268-329 72-142 (367)
463 PF14761 HPS3_N: Hermansky-Pud 86.2 18 0.0004 30.1 16.8 102 238-341 22-164 (215)
464 PF15390 DUF4613: Domain of un 85.7 18 0.00038 34.9 11.8 104 235-340 58-186 (671)
465 KOG2247 WD40 repeat-containing 85.4 0.17 3.7E-06 46.6 -1.1 133 200-336 43-184 (615)
466 smart00564 PQQ beta-propeller 83.7 3.1 6.8E-05 22.4 4.0 25 281-305 8-32 (33)
467 PLN02193 nitrile-specifier pro 83.2 45 0.00098 32.1 19.7 126 173-300 194-354 (470)
468 PRK10115 protease 2; Provision 82.9 58 0.0012 33.1 23.8 184 236-420 129-348 (686)
469 PF14781 BBS2_N: Ciliary BBSom 82.8 19 0.00041 27.4 13.0 100 203-305 10-133 (136)
470 PF02333 Phytase: Phytase; In 82.7 40 0.00086 31.1 23.3 186 162-350 67-301 (381)
471 KOG4460 Nuclear pore complex, 82.7 27 0.00058 33.3 11.4 91 311-418 105-200 (741)
472 KOG1900 Nuclear pore complex, 82.5 28 0.0006 37.0 12.6 142 157-298 84-273 (1311)
473 PF11635 Med16: Mediator compl 82.2 65 0.0014 33.2 16.5 67 268-335 260-345 (753)
474 PF07995 GSDH: Glucose / Sorbo 82.0 25 0.00053 32.0 11.3 93 236-330 4-133 (331)
475 TIGR03548 mutarot_permut cycli 82.0 39 0.00084 30.5 22.3 64 203-266 124-198 (323)
476 PF01011 PQQ: PQQ enzyme repea 81.9 4.1 9E-05 23.1 4.1 28 281-308 2-29 (38)
477 PF09372 PRANC: PRANC domain; 81.9 1.6 3.4E-05 31.4 2.9 26 22-47 70-95 (97)
478 PF11715 Nup160: Nucleoporin N 81.8 8.1 0.00018 37.9 8.7 37 269-305 216-256 (547)
479 TIGR03548 mutarot_permut cycli 81.6 40 0.00087 30.4 18.2 137 118-254 69-234 (323)
480 KOG2280 Vacuolar assembly/sort 81.5 61 0.0013 32.4 17.4 39 310-349 217-255 (829)
481 COG3204 Uncharacterized protei 81.3 37 0.00081 29.8 17.3 155 108-262 81-263 (316)
482 PF12341 DUF3639: Protein of u 81.2 4.3 9.4E-05 21.1 3.5 26 113-138 2-27 (27)
483 PF13570 PQQ_3: PQQ-like domai 80.8 6.5 0.00014 22.5 4.8 21 321-341 20-40 (40)
484 TIGR02604 Piru_Ver_Nterm putat 80.1 49 0.0011 30.5 15.4 60 270-331 126-204 (367)
485 PF12768 Rax2: Cortical protei 79.8 33 0.00072 30.2 10.8 86 254-340 16-123 (281)
486 PF12768 Rax2: Cortical protei 79.3 44 0.00095 29.5 13.2 107 212-318 15-145 (281)
487 KOG4659 Uncharacterized conser 79.1 99 0.0021 33.4 18.2 74 108-181 343-436 (1899)
488 PF01011 PQQ: PQQ enzyme repea 79.1 8.9 0.00019 21.7 4.9 29 324-352 2-30 (38)
489 PF07995 GSDH: Glucose / Sorbo 78.0 54 0.0012 29.8 21.1 67 268-335 253-330 (331)
490 TIGR03118 PEPCTERM_chp_1 conse 77.9 50 0.0011 29.3 20.1 102 196-297 27-170 (336)
491 KOG1983 Tomosyn and related SN 77.5 28 0.00062 36.8 11.3 25 395-419 243-267 (993)
492 PLN02153 epithiospecifier prot 76.7 59 0.0013 29.6 23.1 62 122-183 33-112 (341)
493 PF05935 Arylsulfotrans: Aryls 76.6 75 0.0016 30.6 15.2 143 206-353 118-314 (477)
494 KOG3522 Predicted guanine nucl 76.5 36 0.00078 34.4 10.8 131 164-300 549-700 (925)
495 PF12657 TFIIIC_delta: Transcr 75.7 17 0.00036 29.4 7.4 31 268-298 86-122 (173)
496 KOG4408 Putative Mg2+ and Co2+ 74.3 0.62 1.4E-05 40.7 -1.2 56 21-76 5-60 (386)
497 PF12657 TFIIIC_delta: Transcr 73.0 31 0.00067 27.8 8.3 31 310-341 86-122 (173)
498 KOG3522 Predicted guanine nucl 72.9 33 0.00071 34.7 9.5 140 203-348 547-705 (925)
499 KOG2377 Uncharacterized conser 72.9 85 0.0018 29.5 17.3 234 116-353 26-305 (657)
500 PRK14131 N-acetylneuraminic ac 72.8 81 0.0017 29.2 21.6 16 392-407 338-353 (376)
No 1
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=2.5e-50 Score=333.68 Aligned_cols=351 Identities=19% Similarity=0.279 Sum_probs=228.4
Q ss_pred CCccccccC----HHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCC-------------------C
Q 014590 20 PRATIESLN----GDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFS-------------------N 76 (422)
Q Consensus 20 ~~~~~~~Lp----~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~-------------------~ 76 (422)
..||+..|| .++.+.||+|||+.+|+.+.+|||.|+++..+..+||+++.+....- .
T Consensus 71 qrDFi~~lP~~gl~hi~e~ilsyld~~sLc~celv~k~W~r~l~dg~~WKkLie~~vr~dslWrgl~e~rqw~~~lf~~r 150 (499)
T KOG0281|consen 71 QRDFITALPEQGLDHIAENILSYLDALSLCACELVCKEWKRVLSDGMLWKKLIERMVRTDSLWRGLSERRQWDQYLFKNR 150 (499)
T ss_pred HHHHHHhcccccHHHHHHHHHHhcchhhhhHHHHHHHHHHHHhccchHHHHHHHHhcchHHHHhhhhhccCcchhhccCC
Confidence 458999999 99999999999999999999999999999999999999986644110 0
Q ss_pred C-------CCCChHHHHHHHH-HhhhhhhccccceeeEEeec---cccceeEEEecCCeEEEEecCCeEEEEEcCCCeEE
Q 014590 77 T-------SGSSMRLHLEELA-MKHHRFALEEGRIDIDQWKA---HSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCV 145 (422)
Q Consensus 77 ~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~---H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~ 145 (422)
+ ...+...|-+-.. ...-..+|..|+..+..+.. ....|+|+.+.|+.+++|..|.+|+|||..+.+++
T Consensus 151 ~~~~~~~~n~f~~~l~pki~~di~~idsNWr~Gr~~~~rinc~Se~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~ 230 (499)
T KOG0281|consen 151 PNDGGFPPNSFYRLLYPKIIQDIETIESNWRCGRHLLQRINCRSENSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECL 230 (499)
T ss_pred CCcCCcCCCcchhhhhHHHHHHHhhhhcchhccceeeeeecCCcccCCceEEEEecchhhhcccccCceEEeccccHHHH
Confidence 0 1111112211111 12234688999998888875 45689999999999999999999999999998888
Q ss_pred EeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce
Q 014590 146 EEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC 225 (422)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 225 (422)
..+.+|.+ .++++..+.+ .+++|+.|.+|++||.++|++
T Consensus 231 ~~L~GHtG-SVLCLqyd~r----------------------------------------viisGSSDsTvrvWDv~tge~ 269 (499)
T KOG0281|consen 231 KILTGHTG-SVLCLQYDER----------------------------------------VIVSGSSDSTVRVWDVNTGEP 269 (499)
T ss_pred HhhhcCCC-cEEeeeccce----------------------------------------EEEecCCCceEEEEeccCCch
Confidence 88877643 3344444444 455555555555555555555
Q ss_pred eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEE
Q 014590 226 SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWD 295 (422)
Q Consensus 226 ~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd 295 (422)
+.++-+|...|..+.|+ ++++++++.|.++.+||+.....+ ..|+.+.| +.+++++++.|.+|++|+
T Consensus 270 l~tlihHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~ 346 (499)
T KOG0281|consen 270 LNTLIHHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWS 346 (499)
T ss_pred hhHHhhhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecc--ccceEEEecCCceEEEEe
Confidence 55555555555555552 335555555555555555444332 44555555 334555555555555555
Q ss_pred CCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc--------cccCCCCCCeEE
Q 014590 296 LRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA--------SSSSNKVSGVIE 367 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~--------~~~~~s~d~~i~ 367 (422)
+.+++.++++.+|...|.|+. ..++++++|+.|.+|++||+..|.+++.+.+|.+.+ .+++|..||.|+
T Consensus 347 ~st~efvRtl~gHkRGIAClQ---Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~krIVSGaYDGkik 423 (499)
T KOG0281|consen 347 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 423 (499)
T ss_pred ccceeeehhhhcccccceehh---ccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecCceeeeccccceEE
Confidence 555555555555555555544 345555555555555555555555555555555443 345555555555
Q ss_pred eeeccccCCC------cccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccCC
Q 014590 368 RNEGRRLSAG------CCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 368 ~~~~~~~~~~------~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+|+.....++ .++.. ...|++.|..+.||...+++++.|.+|.|||+..+
T Consensus 424 vWdl~aaldpra~~~~~Cl~~-lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 424 VWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNG 479 (499)
T ss_pred EEecccccCCcccccchHHHh-hhhccceeEEEeecceEEEeccCCCeEEEEEcCCC
Confidence 5544433222 11222 24588999999999999999999999999998754
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.3e-48 Score=327.17 Aligned_cols=308 Identities=17% Similarity=0.214 Sum_probs=264.6
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
..+...+.||.++|.|+.| |+| .|+||+.|.++|+||+.+..+..+.++|.. +.+++|+|||+.|+ |+.||+|++|
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 3456678999999999999 567 999999999999999999999999999865 56699999999999 9999999999
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeC-------CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEE
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFD-------PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISG 250 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~ 250 (422)
|.+++++.-....+|...+.++++.. ..+++++.||+|+|||+..++++..+.+|+.+|+|+.|--++++++|
T Consensus 185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySg 264 (480)
T KOG0271|consen 185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSG 264 (480)
T ss_pred cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEec
Confidence 99999988766666666566655432 23999999999999999999999999999999999999766999999
Q ss_pred cCCCcEEEEeCCCCccc-------cceEeEEEe-----------cCCC-------------------------EEEEEeC
Q 014590 251 SSLGSIAISGLSSDQRL-------TGIKTLCYN-----------PCSR-------------------------LVFAGTT 287 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-------~~v~~~~~~-----------~~~~-------------------------~l~~g~~ 287 (422)
+.|++|++|+...|... ..|+.++++ |.++ .|++|+.
T Consensus 265 S~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsD 344 (480)
T KOG0271|consen 265 SQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSD 344 (480)
T ss_pred CCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecC
Confidence 99999999999998776 667777766 3343 4999999
Q ss_pred CCeEEEEECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc----------c
Q 014590 288 AGYASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------S 356 (422)
Q Consensus 288 dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~ 356 (422)
|.++.+|+... .+++.++.+|...|+.+. ||||++++|+++.|..|++||-++|+.+.+|.+|-..+ .
T Consensus 345 d~tlflW~p~~~kkpi~rmtgHq~lVn~V~-fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRL 423 (480)
T KOG0271|consen 345 DFTLFLWNPFKSKKPITRMTGHQALVNHVS-FSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRL 423 (480)
T ss_pred CceEEEecccccccchhhhhchhhheeeEE-ECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccE
Confidence 99999999764 458889999999999999 99999999999999999999999999999999998877 4
Q ss_pred ccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEE
Q 014590 357 SSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 357 ~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~ 414 (422)
++++|.|.++++|+.... ++..-..+|...|.+++| ||+.+++|+.|..+++|.
T Consensus 424 lVS~SkDsTLKvw~V~tk----Kl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 424 LVSGSKDSTLKVWDVRTK----KLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEEcCCCceEEEEEeeee----eecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 566666667766655432 122223579999999999 899999999999999995
No 3
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=5.9e-41 Score=271.99 Aligned_cols=274 Identities=20% Similarity=0.242 Sum_probs=240.7
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
..++|+||.+.|.++.|. |. +++|+|.||.+.|||..+...++.++.+.. +..++|+|.|+.++ |+.|+...||++
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l 126 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL 126 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence 347899999999999994 55 999999999999999999888888887755 45599999999999 899999999999
Q ss_pred CCC--c---eeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEEc
Q 014590 180 NGL--R---SVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISGS 251 (422)
Q Consensus 180 ~~~--~---~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~ 251 (422)
.+. + .+.....+|.....|..+.+ ..|++++.|.++.+||+++++.+..|.+|.+.|.+++++| + +.+++|+
T Consensus 127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~ 206 (343)
T KOG0286|consen 127 STRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGG 206 (343)
T ss_pred ccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecc
Confidence 855 2 33444555555555555544 4499999999999999999999999999999999999998 5 8999999
Q ss_pred CCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC--CCceeeeeeEecCC
Q 014590 252 SLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS--PNVVYSLQHLQNDT 322 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~s~~~ 322 (422)
.|+..++||++.+... ..|+++.|.|+|.-+++|+.|++.++||++..+.+..+... ..+|++++ ||..|
T Consensus 207 cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~-FS~SG 285 (343)
T KOG0286|consen 207 CDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVA-FSKSG 285 (343)
T ss_pred cccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEE-Ecccc
Confidence 9999999999999877 89999999999999999999999999999998888777643 36899999 99999
Q ss_pred CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEE
Q 014590 323 STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKK 400 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~ 400 (422)
++|++|..|..+.+||.-.++....+.+ |.+.|+|+.. ||..
T Consensus 286 RlLfagy~d~~c~vWDtlk~e~vg~L~G------------------------------------HeNRvScl~~s~DG~a 329 (343)
T KOG0286|consen 286 RLLFAGYDDFTCNVWDTLKGERVGVLAG------------------------------------HENRVSCLGVSPDGMA 329 (343)
T ss_pred cEEEeeecCCceeEeeccccceEEEeec------------------------------------cCCeeEEEEECCCCcE
Confidence 9999999999999999998998888865 5558999888 7899
Q ss_pred EEEEeCCCeEEEEE
Q 014590 401 VVTTHNSKYIRLWK 414 (422)
Q Consensus 401 l~s~s~Dg~i~iW~ 414 (422)
++|||.|.+++||.
T Consensus 330 v~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 330 VATGSWDSTLRIWA 343 (343)
T ss_pred EEecchhHheeecC
Confidence 99999999999994
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=6.9e-43 Score=296.40 Aligned_cols=268 Identities=14% Similarity=0.238 Sum_probs=242.0
Q ss_pred eccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecC--CCeEE-EecCCeEEEEECCCC
Q 014590 109 KAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFD--ESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 109 ~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~--~~~l~-~~~~~~i~~w~~~~~ 182 (422)
-|-+.+|..+.|+ ++ .|+|||.+|.++||+..+...+.+|.+|... ..+.|+|. +..++ ++.||++++|++++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 3667899999994 55 9999999999999999999999999998654 55999997 55677 999999999999987
Q ss_pred cee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEE
Q 014590 183 RSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAIS 259 (422)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iw 259 (422)
..+ +..|. ..+..+++.+.+.+|++++.|.+-++||+++++.+...++|...|.+++|.++ .++++|+.|..-++|
T Consensus 252 ~~l~~l~gH~-~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvW 330 (459)
T KOG0272|consen 252 TPLQDLEGHL-ARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVW 330 (459)
T ss_pred cchhhhhcch-hhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhhee
Confidence 644 44444 44557888899999999999999999999999998888999999999999987 899999999999999
Q ss_pred eCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec-CCCEEEEEecC
Q 014590 260 GLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN-DTSTLVVGGID 331 (422)
Q Consensus 260 d~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~-~~~~l~s~~~d 331 (422)
|+++|.++ .+|.+|+|+|+|..||+|+.|++++|||++..+.+.++.+|.+.|+.+. |+| .|.+|+|++.|
T Consensus 331 DlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk-~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 331 DLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVK-YSPQEGYFLVTASYD 409 (459)
T ss_pred ecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheE-ecccCCeEEEEcccC
Confidence 99999998 8999999999999999999999999999999999999999999999999 988 78899999999
Q ss_pred CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCe
Q 014590 332 GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKY 409 (422)
Q Consensus 332 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~ 409 (422)
++++||...++.+++.+.+ |.+.|.+++. |++.++|++.|.+
T Consensus 410 ~t~kiWs~~~~~~~ksLaG------------------------------------He~kV~s~Dis~d~~~i~t~s~DRT 453 (459)
T KOG0272|consen 410 NTVKIWSTRTWSPLKSLAG------------------------------------HEGKVISLDISPDSQAIATSSFDRT 453 (459)
T ss_pred cceeeecCCCcccchhhcC------------------------------------CccceEEEEeccCCceEEEeccCce
Confidence 9999999999999999866 5558888888 7899999999999
Q ss_pred EEEEE
Q 014590 410 IRLWK 414 (422)
Q Consensus 410 i~iW~ 414 (422)
+++|.
T Consensus 454 ~KLW~ 458 (459)
T KOG0272|consen 454 IKLWR 458 (459)
T ss_pred eeecc
Confidence 99996
No 5
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=3e-41 Score=314.04 Aligned_cols=358 Identities=20% Similarity=0.287 Sum_probs=295.7
Q ss_pred CCCccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCCCC-C-----------CCChHHHH
Q 014590 19 KPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNT-S-----------GSSMRLHL 86 (422)
Q Consensus 19 ~~~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~-~-----------~~~~~~~~ 86 (422)
..++++..||.|+.++||.|||+++|..+++||+.|+.+++++..|...+.+......+ . ..++++..
T Consensus 103 ~~~dfi~~lp~el~~~il~~Ld~~~l~~~~~v~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~ 182 (537)
T KOG0274|consen 103 GQRDFLSLLPSELSLHILSFLDGRDLLAVRQVCRNWNKLLDDDKVWWRMCRELIGRLPPKCEKGLPLKSGFKGRPWKSFY 182 (537)
T ss_pred cccchhhcccchhcccccccCCHHHhhhhhhhcchhhhhhhccchhhhhhhhhcccCCcccCcccccccccccchhhhhh
Confidence 36689999999999999999999999999999999999999999888777665544332 1 12444433
Q ss_pred HHHHHhhhhhhcccccee-eEEeec-cccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEe-eeCCCce-eeEEEecC
Q 014590 87 EELAMKHHRFALEEGRID-IDQWKA-HSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEE-YSLPNAA-SLVDFDFD 162 (422)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~-~~~l~~-H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~-~~~~~~~~ 162 (422)
.+..... .+|...... .+.+.+ |...+.+..+.++++++++.|++|++||..++..+.. +.+|.+. ..+++..-
T Consensus 183 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~ 260 (537)
T KOG0274|consen 183 RRRFRLS--KNWRKLFRRGYKVLLGTDDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSG 260 (537)
T ss_pred hhhhhcc--ccccccccccceeecccCcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecC
Confidence 3222211 222222222 344454 6778888889989999999999999999999999888 8888654 44777765
Q ss_pred CCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEe
Q 014590 163 ESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSL 241 (422)
Q Consensus 163 ~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 241 (422)
+..++ |+.|.++++||..++.+..... ++...+.++......+++|+.|.+|++|++++++++..+.+|.++|+++..
T Consensus 261 ~~~lvsgS~D~t~rvWd~~sg~C~~~l~-gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~ 339 (537)
T KOG0274|consen 261 GDKLVSGSTDKTERVWDCSTGECTHSLQ-GHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQL 339 (537)
T ss_pred CCEEEEEecCCcEEeEecCCCcEEEEec-CCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEe
Confidence 67777 9999999999999988653222 555557788777778999999999999999999999999999999999999
Q ss_pred cCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCcee
Q 014590 242 SEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVY 313 (422)
Q Consensus 242 ~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~ 313 (422)
+ +.++++|+.|++|++||+.+++++ ..|.++.+.+. ..+++|+.|+.|++||+++. +++.++.+|...+.
T Consensus 340 ~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~ 417 (537)
T KOG0274|consen 340 D-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVS 417 (537)
T ss_pred c-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccc
Confidence 6 789999999999999999999888 88999988554 89999999999999999999 99999999999888
Q ss_pred eeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEE
Q 014590 314 SLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITC 393 (422)
Q Consensus 314 ~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 393 (422)
++. ..+++|++++.|++|++||..++++++++..+ |...|++
T Consensus 418 ~l~---~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-----------------------------------~~~~v~~ 459 (537)
T KOG0274|consen 418 SLL---LRDNFLVSSSADGTIKLWDAEEGECLRTLEGR-----------------------------------HVGGVSA 459 (537)
T ss_pred ccc---cccceeEeccccccEEEeecccCceeeeeccC-----------------------------------CcccEEE
Confidence 777 46789999999999999999999999998662 3457888
Q ss_pred EEecCEEEEEEeCCCeEEEEEccCCC
Q 014590 394 LAVGMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 394 i~~~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
+++....+++++.||++++||+++++
T Consensus 460 l~~~~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 460 LALGKEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred eecCcceEEEEecCCeeEEEecccCc
Confidence 88877889999999999999998765
No 6
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.4e-40 Score=261.69 Aligned_cols=258 Identities=17% Similarity=0.288 Sum_probs=225.1
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEEECCCCce----eeecCCCceeeeEE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIWRRNGLRS----VFPSREGTFMKGLC 198 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~----~~~~~~~~~~~~~~ 198 (422)
+|+|+|.|.+||+|...+|.+..++++++. +..+.+.||++.|+++....|++||+.+... .+..+.+. +..+.
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVg 90 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKN-VTAVG 90 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCc-eEEEE
Confidence 899999999999999999999999998754 5569999999999999999999999988764 24444443 34677
Q ss_pred EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cc
Q 014590 199 MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TG 269 (422)
Q Consensus 199 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~ 269 (422)
|..++..+++|++||+++|||++...+.+.++ |.++|+++..+|+ ..|++|..+|.|++||+.+.... ..
T Consensus 91 F~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~ 169 (311)
T KOG0315|consen 91 FQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTS 169 (311)
T ss_pred EeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcc
Confidence 78888889999999999999999977777666 6799999999998 78999999999999999887543 88
Q ss_pred eEeEEEecCCCEEEEEeCCCeEEEEECCCC------eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC-
Q 014590 270 IKTLCYNPCSRLVFAGTTAGYASCWDLRTM------KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG- 342 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~- 342 (422)
|.++...|||.+++++...|..++|++-+. +++.+++.|++-+.... +||++++|+++|.|.+++||+.++.
T Consensus 170 i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~-lSPd~k~lat~ssdktv~iwn~~~~~ 248 (311)
T KOG0315|consen 170 IQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCL-LSPDVKYLATCSSDKTVKIWNTDDFF 248 (311)
T ss_pred eeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEE-ECCCCcEEEeecCCceEEEEecCCce
Confidence 999999999999999999999999998753 56778899999999998 9999999999999999999999866
Q ss_pred ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 343 EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
+....+ .+|...++..+| |+.||+||+.|+.+++|++..+++
T Consensus 249 kle~~l------------------------------------~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~ 292 (311)
T KOG0315|consen 249 KLELVL------------------------------------TGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKE 292 (311)
T ss_pred eeEEEe------------------------------------ecCCceEEeeeeccCccEEEecCCCCceeecccccCce
Confidence 222333 456679999999 799999999999999999998874
No 7
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.3e-40 Score=275.55 Aligned_cols=264 Identities=19% Similarity=0.209 Sum_probs=230.6
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEE-EeeeCCCc-eeeEEEec-----CCCeEE-EecCC
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCV-EEYSLPNA-ASLVDFDF-----DESKIV-GLIGT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~-~~~~~~~~-----~~~~l~-~~~~~ 172 (422)
.+.++.+||...|.|++| ||| .||||+.||+|++||.++|+++ ..+.+|.. +..++|.| ..+.++ ++.||
T Consensus 148 Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg 227 (480)
T KOG0271|consen 148 TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDG 227 (480)
T ss_pred CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCC
Confidence 467889999999999999 688 9999999999999999998766 56677654 45577765 456677 88999
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC--------
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-------- 243 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-------- 243 (422)
.++|||+..+..+ ....+|...+.|+..-+.. +++|+.|++|++|+...|.+...+++|...|+.++.+-
T Consensus 228 ~vrIWd~~~~~~~-~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtga 306 (480)
T KOG0271|consen 228 SVRIWDTKLGTCV-RTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGA 306 (480)
T ss_pred CEEEEEccCceEE-EEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccc
Confidence 9999999887754 3344556667888887554 99999999999999999999999999999999998861
Q ss_pred ----C-------------------------CEEEEEcCCCcEEEEeCCCCc-cc-------cceEeEEEecCCCEEEEEe
Q 014590 244 ----D-------------------------QLIISGSSLGSIAISGLSSDQ-RL-------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 244 ----~-------------------------~~l~s~~~dg~i~iwd~~~~~-~~-------~~v~~~~~~~~~~~l~~g~ 286 (422)
+ ..+++|+.|.++.+|+-...+ .+ .-|+.+.||||++++|+++
T Consensus 307 f~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaS 386 (480)
T KOG0271|consen 307 FDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASAS 386 (480)
T ss_pred cccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEee
Confidence 1 249999999999999976544 33 7899999999999999999
Q ss_pred CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeE
Q 014590 287 TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVI 366 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i 366 (422)
-|..|++||.++|+.+.++++|-+.|+.++ |+.|.++|++|+.|.+++|||+++.+....+++|.+.++.+-+++||..
T Consensus 387 FDkSVkLW~g~tGk~lasfRGHv~~VYqva-wsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~r 465 (480)
T KOG0271|consen 387 FDKSVKLWDGRTGKFLASFRGHVAAVYQVA-WSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQR 465 (480)
T ss_pred cccceeeeeCCCcchhhhhhhccceeEEEE-eccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCce
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999876
Q ss_pred Ee
Q 014590 367 ER 368 (422)
Q Consensus 367 ~~ 368 (422)
..
T Consensus 466 V~ 467 (480)
T KOG0271|consen 466 VA 467 (480)
T ss_pred ee
Confidence 43
No 8
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-38 Score=251.75 Aligned_cols=283 Identities=18% Similarity=0.222 Sum_probs=229.9
Q ss_pred eeeEEeeccccceeEEEec-C--CeEEEEecCCeEEEEEcCC-----CeEEEeeeCCCceee-EEEecCCCeEE-EecCC
Q 014590 103 IDIDQWKAHSVGVDQCRMK-R--GLILTGVGDKVMRLWSLEG-----YKCVEEYSLPNAASL-VDFDFDESKIV-GLIGT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~--~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~ 172 (422)
....+|+||++.|+.++.. . +.+++++.|.++.+|++.. |..++.+.+|+.... +..++||++.+ ++.|+
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~ 85 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG 85 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc
Confidence 4556899999999999983 3 3999999999999998753 677899999766554 99999999998 99999
Q ss_pred eEEEEECCCCce--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC--CccEEEEEecCC---C
Q 014590 173 RICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--CAPVTSLSLSED---Q 245 (422)
Q Consensus 173 ~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~~~---~ 245 (422)
++++||+.+++. .+.+|...+ ..+++++++..+++|+.|++|++|++- +.+..++..+ .+.|.|+.|+|+ .
T Consensus 86 ~lrlWDl~~g~~t~~f~GH~~dV-lsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p 163 (315)
T KOG0279|consen 86 TLRLWDLATGESTRRFVGHTKDV-LSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNP 163 (315)
T ss_pred eEEEEEecCCcEEEEEEecCCce-EEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCc
Confidence 999999999763 355555543 466777777789999999999999985 4555555433 789999999986 5
Q ss_pred EEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeE
Q 014590 246 LIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 318 (422)
++++++.|+++++||+++.+.. +.++.+++||||...++|+.||.+.+||++.++.++.+. |...|.+++ |
T Consensus 164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~-f 241 (315)
T KOG0279|consen 164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLC-F 241 (315)
T ss_pred EEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEE-e
Confidence 8999999999999999987766 889999999999999999999999999999999987774 668899999 9
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-- 396 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-- 396 (422)
+|+.-.|+.+.. ..|+|||+.++.++..+....... ..+.-...-.+++|
T Consensus 242 spnrywL~~at~-~sIkIwdl~~~~~v~~l~~d~~g~---------------------------s~~~~~~~clslaws~ 293 (315)
T KOG0279|consen 242 SPNRYWLCAATA-TSIKIWDLESKAVVEELKLDGIGP---------------------------SSKAGDPICLSLAWSA 293 (315)
T ss_pred cCCceeEeeccC-CceEEEeccchhhhhhcccccccc---------------------------ccccCCcEEEEEEEcC
Confidence 998777766654 459999999999988876532210 00111122345666
Q ss_pred cCEEEEEEeCCCeEEEEEccC
Q 014590 397 GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 397 ~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
||..|++|-.|+.|++|.+..
T Consensus 294 dG~tLf~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 294 DGQTLFAGYTDNVIRVWQVAK 314 (315)
T ss_pred CCcEEEeeecCCcEEEEEeec
Confidence 699999999999999999753
No 9
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.3e-39 Score=268.48 Aligned_cols=282 Identities=13% Similarity=0.153 Sum_probs=249.0
Q ss_pred hccccceeeEEeeccccceeEEEecC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCC
Q 014590 97 ALEEGRIDIDQWKAHSVGVDQCRMKR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 97 ~~~~~~~~~~~l~~H~~~v~~v~~~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~ 172 (422)
.|.....+.+.+.||..+|+.+-|.+ - .+++++.|++|++||..+|++...+++|... ..++|+..|+.++ ++.|-
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl 172 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL 172 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc
Confidence 35566667888999999999999954 4 8899999999999999999999999998655 4499999999999 88888
Q ss_pred eEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 173 RICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 173 ~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
.+++||.++.... ......+.+..+++.+.+..+++++.|.+|+.|++.+|-+++++.+|...|..+..+.| .++++
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As 252 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS 252 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe
Confidence 8999999885422 23334566778888889999999999999999999999999999999999999999966 89999
Q ss_pred EcCCCcEEEEeCCCCccc-------cceEeEEEecC---------------CCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 250 GSSLGSIAISGLSSDQRL-------TGIKTLCYNPC---------------SRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~---------------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
++.|.++++|-+.++++. .+|.+++|.|. +.++.+++.|++|++||+.++.++.++.+
T Consensus 253 ~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g 332 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG 332 (406)
T ss_pred cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec
Confidence 999999999999998554 78888888763 25899999999999999999999999999
Q ss_pred CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCC
Q 014590 308 SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTI 387 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h 387 (422)
|.+.|..++ |+|.|+||+++.+|+++++||+++++++.++.. |
T Consensus 333 hdnwVr~~a-f~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a------------------------------------h 375 (406)
T KOG0295|consen 333 HDNWVRGVA-FSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA------------------------------------H 375 (406)
T ss_pred ccceeeeeE-EcCCCeEEEEEecCCcEEEEEeccceeeeccCC------------------------------------C
Confidence 999999999 999999999999999999999999999999865 4
Q ss_pred CCCeEEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 388 RPPITCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 388 ~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
...|++++| +..+++||+-|.++++|.-
T Consensus 376 ~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 376 EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cceeEEEecCCCCceEEeccccceeeeeec
Confidence 458999999 4679999999999999974
No 10
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=7.4e-38 Score=260.58 Aligned_cols=287 Identities=18% Similarity=0.266 Sum_probs=242.6
Q ss_pred ccccceeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCe
Q 014590 98 LEEGRIDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 98 ~~~~~~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
|...-.+.+.+.||.+.|.|+++. .+ +|+||+.|++|+|||+.+|++..++.+|- .+.-+++|+--.+++ ++.|++
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCe
Confidence 333445678899999999999994 44 99999999999999999999999999874 445599999888888 899999
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-CCEEEEE
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-DQLIISG 250 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~ 250 (422)
|+.||++..+.+ ....||...+.|+... -..|++|+.|.++++||+++...+..+.+|..+|.++.+.| +..+++|
T Consensus 217 VKCwDLe~nkvI-R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~ 295 (460)
T KOG0285|consen 217 VKCWDLEYNKVI-RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITG 295 (460)
T ss_pred eEEEechhhhhH-HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEe
Confidence 999999988744 4555666666666655 44599999999999999999999999999999999999986 4799999
Q ss_pred cCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 251 SSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
|.|++|++||++.|+.. ..+.+++.+|....+|+++.|. |+-|++..+..+..+.+|...|++++ ...| .
T Consensus 296 S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~-~nsD-~ 372 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLS-VNSD-G 372 (460)
T ss_pred cCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccceeeeee-eccC-c
Confidence 99999999999999876 7899999999999999999887 99999999999999999999999998 6544 4
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEEE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKV 401 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l 401 (422)
++++|+++|.+.+||.++|-..+....-.+ -|.+ .....|.+.+|| +..|
T Consensus 373 v~~~G~dng~~~fwdwksg~nyQ~~~t~vq---------pGSl-------------------~sEagI~as~fDktg~rl 424 (460)
T KOG0285|consen 373 VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQ---------PGSL-------------------ESEAGIFASCFDKTGSRL 424 (460)
T ss_pred eEEEcCCceEEEEEecCcCccccccccccc---------CCcc-------------------ccccceeEEeecccCceE
Confidence 899999999999999999877666532111 0000 113578999995 8999
Q ss_pred EEEeCCCeEEEEEcc
Q 014590 402 VTTHNSKYIRLWKFN 416 (422)
Q Consensus 402 ~s~s~Dg~i~iW~~~ 416 (422)
+||..|.+|++|.-+
T Consensus 425 it~eadKtIk~~keD 439 (460)
T KOG0285|consen 425 ITGEADKTIKMYKED 439 (460)
T ss_pred EeccCCcceEEEecc
Confidence 999999999999854
No 11
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=5.4e-39 Score=272.77 Aligned_cols=235 Identities=16% Similarity=0.227 Sum_probs=214.4
Q ss_pred eeeEEeeccccceeEEEe-cC--C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KR--G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~--~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~ 176 (422)
..+.+|.||++.|.++.| |. + .+|||+.||++++|++++..++..+.+|..... ++|+|+|++|+ ++.|.+-++
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRl 287 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRL 287 (459)
T ss_pred ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhh
Confidence 678899999999999999 43 4 999999999999999999899999998865544 99999999999 999999999
Q ss_pred EECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 177 WRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 177 w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
||+.++..+ .+.-....+..+++.+++..+++|+.|..-+|||+++|.++..+.+|..+|.+++|+|+ ..+++|+.|+
T Consensus 288 WD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 288 WDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred cccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCC
Confidence 999998865 33333344567788888899999999999999999999999999999999999999998 7899999999
Q ss_pred cEEEEeCCCCccc-------cceEeEEEec-CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEE
Q 014590 255 SIAISGLSSDQRL-------TGIKTLCYNP-CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLV 326 (422)
Q Consensus 255 ~i~iwd~~~~~~~-------~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~ 326 (422)
+++|||++..+.+ .-|+.+.|+| .|.+|++++.|+++++|..+++.++..+.||++.|.++. +++++++++
T Consensus 368 t~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~D-is~d~~~i~ 446 (459)
T KOG0272|consen 368 TCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLD-ISPDSQAIA 446 (459)
T ss_pred cEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEE-eccCCceEE
Confidence 9999999987766 7889999998 789999999999999999999999999999999999999 999999999
Q ss_pred EEecCCeEEEEE
Q 014590 327 VGGIDGVLRVLD 338 (422)
Q Consensus 327 s~~~dg~v~vwd 338 (422)
+++.|.++++|.
T Consensus 447 t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 447 TSSFDRTIKLWR 458 (459)
T ss_pred EeccCceeeecc
Confidence 999999999995
No 12
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=8.2e-36 Score=260.06 Aligned_cols=307 Identities=16% Similarity=0.131 Sum_probs=254.5
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee---CCC-ceeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS---LPN-AASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
.+++.|..-|.|+.| ||| +++|++.||+|.+||-.+|+.+..+. .|. ++..++|+||+..++ ++.|.++++||
T Consensus 184 ~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWd 263 (603)
T KOG0318|consen 184 SSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWD 263 (603)
T ss_pred ecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEE
Confidence 456789999999999 677 99999999999999999999999998 443 456699999999999 99999999999
Q ss_pred CCCCceeeecCCCc--eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 179 RNGLRSVFPSREGT--FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
+.+.+.+.....+. ....+...+.+..|++.+.+|+|.+++.....+++.+.+|...|+++..+|+ .++++|+.||.
T Consensus 264 Vs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~ 343 (603)
T KOG0318|consen 264 VSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGH 343 (603)
T ss_pred eeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCce
Confidence 99887542222221 1234455556777999999999999999999999999999999999999987 89999999999
Q ss_pred EEEEeCCCCccc--------------------------------------------------------------------
Q 014590 256 IAISGLSSDQRL-------------------------------------------------------------------- 267 (422)
Q Consensus 256 i~iwd~~~~~~~-------------------------------------------------------------------- 267 (422)
|.-||..++..-
T Consensus 344 I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~ 423 (603)
T KOG0318|consen 344 INSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVA 423 (603)
T ss_pred EEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEE
Confidence 999998776432
Q ss_pred --------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee--eeeeccCCCceeeeeeEecCCCEE
Q 014590 268 --------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS--LWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 268 --------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
....+++++|++..+++|++|++|++|.+..+.. ...+..|.++|++++ +|||+.+|
T Consensus 424 ~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~va-ySpd~~yl 502 (603)
T KOG0318|consen 424 CISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVA-YSPDGAYL 502 (603)
T ss_pred ecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEE-ECCCCcEE
Confidence 4567899999999999999999999999986543 345667999999999 99999999
Q ss_pred EEEecCCeEEEEECCCCceE-EEeeecCCcccccCCCCCC----------eEEeeeccccCCCcccccCCCCCCCCeEEE
Q 014590 326 VVGGIDGVLRVLDQNTGEVL-SRCVMDIGSASSSSNKVSG----------VIERNEGRRLSAGCCIDRIPKTIRPPITCL 394 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~~~~~~~s~d~----------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i 394 (422)
|+|...+.+.+||+.+.+.. .....|...+..+++++++ .|.+ +.+..+.....+..+|...|+.+
T Consensus 503 a~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Vii---ysv~kP~~~i~iknAH~~gVn~v 579 (603)
T KOG0318|consen 503 AAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVII---YSVKKPAKHIIIKNAHLGGVNSV 579 (603)
T ss_pred EEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEE---EEccChhhheEeccccccCceeE
Confidence 99999999999999987763 3344566666555555554 4444 44555555566778899999999
Q ss_pred Ee-cCEEEEEEeCCCeEEEEEcc
Q 014590 395 AV-GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 395 ~~-~~~~l~s~s~Dg~i~iW~~~ 416 (422)
.| |...++|.|.|-.|++|.+.
T Consensus 580 ~wlde~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 580 AWLDESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred EEecCceEEeccCcceeEEeccc
Confidence 99 89999999999999999975
No 13
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.1e-36 Score=273.63 Aligned_cols=309 Identities=19% Similarity=0.262 Sum_probs=238.8
Q ss_pred eeeEEeec-cccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCe--EE-EecCCeEE
Q 014590 103 IDIDQWKA-HSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESK--IV-GLIGTRIC 175 (422)
Q Consensus 103 ~~~~~l~~-H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~--l~-~~~~~~i~ 175 (422)
..++.+++ |++||.-++|. .+ .+++|+.|+.++|||+..+.+.+.|+++.++.+ +.|.|+... |+ +..|++++
T Consensus 95 k~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~ 174 (775)
T KOG0319|consen 95 KLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVR 174 (775)
T ss_pred hHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEE
Confidence 56777888 99999999994 44 999999999999999999999999999777665 999998776 33 88899999
Q ss_pred EEECCCCce---eeecCCCceeeeEEEeeeCC----------------------------------------------eE
Q 014590 176 IWRRNGLRS---VFPSREGTFMKGLCMRYFDP----------------------------------------------EA 206 (422)
Q Consensus 176 ~w~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------------------------------------------~l 206 (422)
+||+.+... +...|...+ ..+.+..++. ++
T Consensus 175 vwnl~~~~tcl~~~~~H~S~v-tsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~ 253 (775)
T KOG0319|consen 175 VWNLNDKRTCLHTMILHKSAV-TSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYI 253 (775)
T ss_pred EEEcccCchHHHHHHhhhhhe-eeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEE
Confidence 999985443 122222211 1222333333 34
Q ss_pred EEecCCCeEEEEeCCCcceeee----------------------------------------------------------
Q 014590 207 VVGCEDGTARVFDMYSRKCSQI---------------------------------------------------------- 228 (422)
Q Consensus 207 ~~~~~d~~i~iwd~~~~~~~~~---------------------------------------------------------- 228 (422)
++++.+|.+++||.++++++..
T Consensus 254 ~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG 333 (775)
T KOG0319|consen 254 ITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLG 333 (775)
T ss_pred EEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecC
Confidence 5555555555555544332110
Q ss_pred ---------------------------eecCCccEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc-------------
Q 014590 229 ---------------------------IRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL------------- 267 (422)
Q Consensus 229 ---------------------------~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~------------- 267 (422)
+.+|+..|.+++.. .+.++++|+.|.++++|.+.++...
T Consensus 334 ~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~s 413 (775)
T KOG0319|consen 334 PEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNS 413 (775)
T ss_pred CccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccc
Confidence 34677777777633 3457777777777777766333221
Q ss_pred --------------------------------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 268 --------------------------------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 268 --------------------------------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
..|++++++|+..++|+|+.|.+.+||+++
T Consensus 414 vgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le 493 (775)
T KOG0319|consen 414 VGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE 493 (775)
T ss_pred cceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeeccc
Confidence 679999999999999999999999999999
Q ss_pred CCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEE
Q 014590 298 TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIE 367 (422)
Q Consensus 298 ~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~ 367 (422)
......++.+|...|+++. |+|..+.++|+|.|++|+||.+.+..|+++|.+|...+ .+++++.||.++
T Consensus 494 ~~~l~~vLsGH~RGvw~V~-Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliK 572 (775)
T KOG0319|consen 494 QLRLLGVLSGHTRGVWCVS-FSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIK 572 (775)
T ss_pred CceEEEEeeCCccceEEEE-eccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEE
Confidence 9999999999999999999 99999999999999999999999999999999999876 567888899888
Q ss_pred eeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 368 RNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
+|+.. +..+...+ ..|...|++++. ...+++||+.||.|.+|.=.+
T Consensus 573 lWnik---t~eC~~tl-D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 573 LWNIK---TNECEMTL-DAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred EEecc---chhhhhhh-hhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 76554 34444443 679999999999 467999999999999997544
No 14
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-36 Score=240.36 Aligned_cols=237 Identities=22% Similarity=0.344 Sum_probs=205.0
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+..++.|+||...|..+.. +|| +.++++.|+++++||+.+++..+.|.+|... ..++|++|++.++ ++.|.+|++|
T Consensus 53 G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklw 132 (315)
T KOG0279|consen 53 GVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLW 132 (315)
T ss_pred CceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeee
Confidence 4578899999999999988 577 9999999999999999999999999998765 4599999999999 9999999999
Q ss_pred ECCCCceeeecCC--CceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 178 RRNGLRSVFPSRE--GTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 178 ~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
++.+....-.... ..-+.+++|.+. .+.+++++.|++|++||+++-+....+.+|++.++.++++|| .++++|+.
T Consensus 133 nt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgk 212 (315)
T KOG0279|consen 133 NTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGK 212 (315)
T ss_pred eecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCC
Confidence 9988775433322 455667777776 567999999999999999999999999999999999999998 89999999
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC---------CCceeeeee
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS---------PNVVYSLQH 317 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---------~~~v~~l~~ 317 (422)
||.+.+||++.++.+ ..|.+++|+|+...|+.+...+ |+|||+.++..+.+++.. .....+++
T Consensus 213 dg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~~s-IkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clsla- 290 (315)
T KOG0279|consen 213 DGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATS-IKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLA- 290 (315)
T ss_pred CceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccCCc-eEEEeccchhhhhhccccccccccccCCcEEEEEE-
Confidence 999999999999887 8999999999987777776554 999999998877665431 22345677
Q ss_pred EecCCCEEEEEecCCeEEEEECC
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
|+++|+.|++|-.|+.|++|.+.
T Consensus 291 ws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 291 WSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EcCCCcEEEeeecCCcEEEEEee
Confidence 89999999999999999999875
No 15
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=5.3e-37 Score=264.98 Aligned_cols=275 Identities=17% Similarity=0.222 Sum_probs=244.2
Q ss_pred eeeEEeeccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCC-CeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEG-YKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
..++++.||+..|+++.| + .+ +|++++.|+.|+||++-. ++++++|.+|... ..++|+.+|..++ ++-|+.+++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL 284 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence 467899999999999998 4 45 999999999999999876 8999999998655 4599999999998 999999999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
||+++++.+...+.+....++.+.+++ +.+++|+.|+.|+.||+++++.++.+..|-+.|..+.|-++ ..+++.+.|+
T Consensus 285 wDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk 364 (503)
T KOG0282|consen 285 WDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK 364 (503)
T ss_pred eccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCc
Confidence 999999999999999998889999888 44999999999999999999999999999999999999976 8999999999
Q ss_pred cEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC---eeeeeeccCC--CceeeeeeEecC
Q 014590 255 SIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM---KSLWETRISP--NVVYSLQHLQND 321 (422)
Q Consensus 255 ~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~---~~~~~~~~~~--~~v~~l~~~s~~ 321 (422)
++++|+.+.+..+ ....++..+|++.++++-+.|+.|.+|.+... .....+.+|. +--..+. ||||
T Consensus 365 s~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~-fSpD 443 (503)
T KOG0282|consen 365 SVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVD-FSPD 443 (503)
T ss_pred cEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEE-EcCC
Confidence 9999999887766 66778999999999999999999999987642 3334577776 4455677 9999
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec---C
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---M 398 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~ 398 (422)
|.+|++|..||.+.+||.++-+.+..++.| .+++..+.|. .
T Consensus 444 G~~l~SGdsdG~v~~wdwkt~kl~~~lkah------------------------------------~~~ci~v~wHP~e~ 487 (503)
T KOG0282|consen 444 GRTLCSGDSDGKVNFWDWKTTKLVSKLKAH------------------------------------DQPCIGVDWHPVEP 487 (503)
T ss_pred CCeEEeecCCccEEEeechhhhhhhccccC------------------------------------CcceEEEEecCCCc
Confidence 999999999999999999998888888654 4588999993 5
Q ss_pred EEEEEEeCCCeEEEEE
Q 014590 399 KKVVTTHNSKYIRLWK 414 (422)
Q Consensus 399 ~~l~s~s~Dg~i~iW~ 414 (422)
..++|+|.||.|++|+
T Consensus 488 Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 488 SKVATCGWDGLIKIWD 503 (503)
T ss_pred ceeEecccCceeEecC
Confidence 7899999999999996
No 16
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.2e-35 Score=229.69 Aligned_cols=248 Identities=19% Similarity=0.209 Sum_probs=215.9
Q ss_pred eeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
.+.+.|.+|.++|.++.|+ +| |.++++.|++|++|+...|.+++++.+|..... ++.+.|+..++ ++.|..+.+||
T Consensus 8 kr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwD 87 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWD 87 (307)
T ss_pred hhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEE
Confidence 3667899999999999995 66 999999999999999999999999999876655 88999999999 89999999999
Q ss_pred CCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc--ceeeeeecCCccEEEEEecCCCEEEEEcCCC
Q 014590 179 RNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR--KCSQIIRMHCAPVTSLSLSEDQLIISGSSLG 254 (422)
Q Consensus 179 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg 254 (422)
+++++.. +.+|.+.+ ..+.++.....+++|+.|.++++||.++. ++++.+....+.|.++.. .+..+++|+.||
T Consensus 88 V~TGkv~Rr~rgH~aqV-NtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v-~~heIvaGS~DG 165 (307)
T KOG0316|consen 88 VNTGKVDRRFRGHLAQV-NTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV-AEHEIVAGSVDG 165 (307)
T ss_pred cccCeeeeeccccccee-eEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe-cccEEEeeccCC
Confidence 9999854 55665553 35555556666999999999999998765 588888888889999988 467899999999
Q ss_pred cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee-eEecCCCEEEEE
Q 014590 255 SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ-HLQNDTSTLVVG 328 (422)
Q Consensus 255 ~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~-~~s~~~~~l~s~ 328 (422)
+++.||++.|+.. .+|++++|++|++..++++.|+++++.|-.+|+++..+++|.+.-+.+. ++......+++|
T Consensus 166 tvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sg 245 (307)
T KOG0316|consen 166 TVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSG 245 (307)
T ss_pred cEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEec
Confidence 9999999999887 8999999999999999999999999999999999999999987655554 255666799999
Q ss_pred ecCCeEEEEECCCCceEEEeeecC
Q 014590 329 GIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
++||.|++||+.....+..+..+.
T Consensus 246 SEDG~Vy~wdLvd~~~~sk~~~~~ 269 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDETQISKLSVVS 269 (307)
T ss_pred cCCceEEEEEeccceeeeeeccCC
Confidence 999999999999888888876543
No 17
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=4.3e-36 Score=254.09 Aligned_cols=272 Identities=22% Similarity=0.303 Sum_probs=233.9
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCc-ee
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLR-SV 185 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~-~~ 185 (422)
-..+|..|.| ++| .|++|+..|.+.+|+..+-.....+..|+ .+..+.+++++..++ +..+|.|++|+..... ..
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~ 174 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI 174 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH
Confidence 3457888999 777 99999999999999974322222233444 456699999999999 8889999999987655 45
Q ss_pred eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCC
Q 014590 186 FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~ 264 (422)
++.+....+..+++++.+..+++++.||+|+|||....+....+.+|.-.|.+++|+|. .++++|+.|..|++||.+++
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg 254 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG 254 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc
Confidence 67777677778888887777999999999999999999888889999999999999998 89999999999999999999
Q ss_pred ccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC-CCEEEEEecCCeEEE
Q 014590 265 QRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND-TSTLVVGGIDGVLRV 336 (422)
Q Consensus 265 ~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~-~~~l~s~~~dg~v~v 336 (422)
+++ ..|..+.|+|++++|++++.|..++++|+++++.+.++++|+..|+++. |+|- ..+|.+|+.||.|..
T Consensus 255 ~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~-WhP~~~~lftsgg~Dgsvvh 333 (464)
T KOG0284|consen 255 SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT-WHPLNESLFTSGGSDGSVVH 333 (464)
T ss_pred chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec-cccccccceeeccCCCceEE
Confidence 998 8899999999999999999999999999999999999999999999999 6664 568889999999999
Q ss_pred EECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEE
Q 014590 337 LDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 337 wd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~ 414 (422)
|.+...+++..+ ..+|...|++++|+ |..|+||+.|.++++|.
T Consensus 334 ~~v~~~~p~~~i-----------------------------------~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 334 WVVGLEEPLGEI-----------------------------------PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred EeccccccccCC-----------------------------------CcccccceeeeeccccceeEeecCCCcceeeec
Confidence 998744443333 45688999999996 89999999999999997
Q ss_pred ccCC
Q 014590 415 FNYS 418 (422)
Q Consensus 415 ~~~~ 418 (422)
-..+
T Consensus 379 r~rp 382 (464)
T KOG0284|consen 379 RNRP 382 (464)
T ss_pred cCCC
Confidence 6543
No 18
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.9e-35 Score=269.94 Aligned_cols=268 Identities=16% Similarity=0.248 Sum_probs=220.6
Q ss_pred eeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCC
Q 014590 104 DIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG 181 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~ 181 (422)
...++..-...++|..|+|+ .||.|-.|..|++|.+... .++.++......-.. ..+.|-.+.+.|...
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~-kl~~lk~~~~l~~~d--------~~sad~~~~~~D~~~ 440 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPK-KLKKLKDASDLSNID--------TESADVDVDMLDDDS 440 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchh-hhccccchhhhcccc--------ccccchhhhhccccC
Confidence 45667777778999999655 8999999999999998753 333333221110000 012222233333333
Q ss_pred Cc--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEE
Q 014590 182 LR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAI 258 (422)
Q Consensus 182 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~i 258 (422)
.. ..+.+|.+++ ....++++..+|+++|+|+++|+|.+.+..++-.+++|..||+.+.|+|- -+|+|++.|++.++
T Consensus 441 ~~~~~~L~GH~GPV-yg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArL 519 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPV-YGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARL 519 (707)
T ss_pred CceeEEeecCCCce-eeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeee
Confidence 22 3366676665 36778888888999999999999999999999999999999999999986 79999999999999
Q ss_pred EeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 259 SGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 259 wd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
|.......+ ..|.|+.|+|+.+|+++|+.|.+|++||..+|..++.+.||.++|.+++ |||+|++|++|+.|
T Consensus 520 Ws~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~-~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 520 WSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALA-FSPCGRYLASGDED 598 (707)
T ss_pred eecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEE-EcCCCceEeecccC
Confidence 998876665 8999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCe
Q 014590 332 GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKY 409 (422)
Q Consensus 332 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~ 409 (422)
|.|++||+.+++.+..+.+| ++.|.++.| +|..||+||.|.+
T Consensus 599 ~~I~iWDl~~~~~v~~l~~H------------------------------------t~ti~SlsFS~dg~vLasgg~Dns 642 (707)
T KOG0263|consen 599 GLIKIWDLANGSLVKQLKGH------------------------------------TGTIYSLSFSRDGNVLASGGADNS 642 (707)
T ss_pred CcEEEEEcCCCcchhhhhcc------------------------------------cCceeEEEEecCCCEEEecCCCCe
Confidence 99999999999999888664 468999999 7999999999999
Q ss_pred EEEEEccCC
Q 014590 410 IRLWKFNYS 418 (422)
Q Consensus 410 i~iW~~~~~ 418 (422)
|++||+...
T Consensus 643 V~lWD~~~~ 651 (707)
T KOG0263|consen 643 VRLWDLTKV 651 (707)
T ss_pred EEEEEchhh
Confidence 999998653
No 19
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4e-35 Score=248.57 Aligned_cols=280 Identities=13% Similarity=0.137 Sum_probs=231.9
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC---eEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
..+.|..|++.|+-+.| ++| ||||++.|.+..+|++... +..+++.+|.. +..+.||||.++++ ++.+..+.+
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l 295 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL 295 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence 45678899999999999 567 9999999999999997654 34677777654 45599999999998 778888999
Q ss_pred EECCCCceee--ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC-CccEEEEEecCC-CEEEEEcC
Q 014590 177 WRRNGLRSVF--PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH-CAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 177 w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~~~-~~l~s~~~ 252 (422)
||+.++.... ....+......+|.+++..+++|+.|+++..||+. |+.....++- ...|.++++.+| .++++.+.
T Consensus 296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~ 374 (519)
T KOG0293|consen 296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTV 374 (519)
T ss_pred ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEec
Confidence 9999988543 22235666788899999999999999999999985 5555555443 246899999976 88888899
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee-eEe-cCCCE
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ-HLQ-NDTST 324 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~-~~s-~~~~~ 324 (422)
|..|++++.++.... .+|+++++|.+++++++.-.+..+.+||+...+.+.++.||+..-.-+. ||. .+..+
T Consensus 375 d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~f 454 (519)
T KOG0293|consen 375 DKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKF 454 (519)
T ss_pred ccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcce
Confidence 999999998765544 8999999999999999999999999999999999999999985433222 243 34579
Q ss_pred EEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe---cCEEE
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---GMKKV 401 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~~~~l 401 (422)
+++||+|+.|+||+..+|+++..+.+ |...|+|++| +..++
T Consensus 455 iaSGSED~kvyIWhr~sgkll~~LsG------------------------------------Hs~~vNcVswNP~~p~m~ 498 (519)
T KOG0293|consen 455 IASGSEDSKVYIWHRISGKLLAVLSG------------------------------------HSKTVNCVSWNPADPEMF 498 (519)
T ss_pred EEecCCCceEEEEEccCCceeEeecC------------------------------------CcceeeEEecCCCCHHHh
Confidence 99999999999999999999999866 5568999999 57899
Q ss_pred EEEeCCCeEEEEEccCCCC
Q 014590 402 VTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 402 ~s~s~Dg~i~iW~~~~~~~ 420 (422)
||||+||+||||......+
T Consensus 499 ASasDDgtIRIWg~~~~~r 517 (519)
T KOG0293|consen 499 ASASDDGTIRIWGPSDNNR 517 (519)
T ss_pred hccCCCCeEEEecCCcccc
Confidence 9999999999999876543
No 20
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=226.55 Aligned_cols=271 Identities=15% Similarity=0.200 Sum_probs=217.1
Q ss_pred eeeEEeeccccceeEEEecC--C-eEEEEecCCeEEEEEcCC---CeEEEeeeC-C-CceeeEEEecCCCeEEEecCCeE
Q 014590 103 IDIDQWKAHSVGVDQCRMKR--G-LILTGVGDKVMRLWSLEG---YKCVEEYSL-P-NAASLVDFDFDESKIVGLIGTRI 174 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~--~-~l~s~~~dg~v~iwd~~~---~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~i 174 (422)
..++.++||++.|..++++. | .||||+.|+.||+|+... -.+...+.. | ..+..++++|.|++
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~--------- 75 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRY--------- 75 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcE---------
Confidence 46788999999999999954 4 899999999999999884 334444432 2 23444666666654
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc--ceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR--KCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
|++||.|.++.||.-..+ +++.++++|...|.+++|+++ ++|++++
T Consensus 76 -------------------------------La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCS 124 (312)
T KOG0645|consen 76 -------------------------------LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCS 124 (312)
T ss_pred -------------------------------EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEee
Confidence 788888888888876544 588999999999999999965 9999999
Q ss_pred CCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECC---CCeeeeeeccCCCceeeeeeE
Q 014590 252 SLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR---TMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~l~~~ 318 (422)
.|+.+-+|.+..+... ..|..+.|+|...+|++++.|++|++|+-. ..+++.++.+|.+.|.+++ |
T Consensus 125 RDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~-F 203 (312)
T KOG0645|consen 125 RDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLA-F 203 (312)
T ss_pred CCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEE-e
Confidence 9999999999865544 788999999999999999999999999766 3578999999999999999 9
Q ss_pred ecCCCEEEEEecCCeEEEEECCCC------ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCc---ccccCCCCCCC
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTG------EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGC---CIDRIPKTIRP 389 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~------~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~---~~~~~~~~h~~ 389 (422)
++.|..|++++.|++|+||-..+. ..+..+.-. .-.+++++.|+.+++.....-+.+. .+......|..
T Consensus 204 ~~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~ 281 (312)
T KOG0645|consen 204 DNIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEV 281 (312)
T ss_pred cCCCceEEEecCCcceEeeeeccCcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhccccc
Confidence 999999999999999999985421 122323222 2367888899988876665443332 33345578999
Q ss_pred CeEEEEec---CEEEEEEeCCCeEEEEEcc
Q 014590 390 PITCLAVG---MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 390 ~v~~i~~~---~~~l~s~s~Dg~i~iW~~~ 416 (422)
.|++++|+ .++|++||.||.|++|.+.
T Consensus 282 dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 282 DVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999995 5899999999999999875
No 21
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2e-33 Score=249.51 Aligned_cols=272 Identities=24% Similarity=0.359 Sum_probs=230.3
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-EecCCeEEEEECC
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
++++++|.++|.+++| +++ ++++++.||.+++|++.+++....+..+.... .+.++++++.++ ++.++.+++|++.
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 3568899999999999 454 99999999999999999988877777765554 799999998887 7889999999999
Q ss_pred CCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 181 GLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
+++.. +..+.. ....+.+.+.+..+++++.++.|.+||+.+++....+..|...+.+++++|+ .++++++.|+.++
T Consensus 82 ~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 160 (289)
T cd00200 82 TGECVRTLTGHTS-YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK 160 (289)
T ss_pred cccceEEEeccCC-cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence 86433 333332 2344555555566777777999999999989988888889999999999986 7777777799999
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+||+++++.. ..+.+++|+|+++.+++++.++.|++||+++++.+..+..|...+.++. ++|++.++++++.
T Consensus 161 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~ 239 (289)
T cd00200 161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVA-FSPDGYLLASGSE 239 (289)
T ss_pred EEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEE-EcCCCcEEEEEcC
Confidence 9999877665 5899999999999999999999999999999999988888988999999 9999888988888
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
||.|++||+.+++....+.. |...|.+++| ++.+|++++.||
T Consensus 240 ~~~i~i~~~~~~~~~~~~~~------------------------------------~~~~i~~~~~~~~~~~l~~~~~d~ 283 (289)
T cd00200 240 DGTIRVWDLRTGECVQTLSG------------------------------------HTNSVTSLAWSPDGKRLASGSADG 283 (289)
T ss_pred CCcEEEEEcCCceeEEEccc------------------------------------cCCcEEEEEECCCCCEEEEecCCC
Confidence 99999999998887777653 4458999999 458999999999
Q ss_pred eEEEEE
Q 014590 409 YIRLWK 414 (422)
Q Consensus 409 ~i~iW~ 414 (422)
.|++|+
T Consensus 284 ~i~iw~ 289 (289)
T cd00200 284 TIRIWD 289 (289)
T ss_pred eEEecC
Confidence 999996
No 22
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=7.4e-34 Score=244.75 Aligned_cols=263 Identities=16% Similarity=0.243 Sum_probs=227.7
Q ss_pred ccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEECCCCce--e
Q 014590 112 SVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLRS--V 185 (422)
Q Consensus 112 ~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~--~ 185 (422)
...|++++|+ +| .||+|+.||.+++|+.. |..+.++..|.+. ..+.|+..|++|+ ++.|+++.+||..++.. .
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 4579999995 66 99999999999999975 6777888776554 5599999999999 89999999999987763 3
Q ss_pred eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCC
Q 014590 186 FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~ 263 (422)
+..+... .+.+.+.+.. +++++.|+.|+++.+....++.++.+|.++|.++.|+|. .+|+++|.|+++++|+...
T Consensus 314 f~~~s~~---~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~ 390 (524)
T KOG0273|consen 314 FEFHSAP---ALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ 390 (524)
T ss_pred eeeccCC---ccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence 4444444 2334444443 999999999999999888999999999999999999985 8999999999999999876
Q ss_pred Cccc-------cceEeEEEecCC---------CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEE
Q 014590 264 DQRL-------TGIKTLCYNPCS---------RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 264 ~~~~-------~~v~~~~~~~~~---------~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s 327 (422)
.... ..|..+.|+|+| ..+++++.|++|++||+..+.++.++..|..+|++++ |+|+|+++|+
T Consensus 391 ~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysva-fS~~g~ylAs 469 (524)
T KOG0273|consen 391 SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVA-FSPNGRYLAS 469 (524)
T ss_pred CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEE-ecCCCcEEEe
Confidence 6655 778999999876 5789999999999999999999999999999999999 9999999999
Q ss_pred EecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEe
Q 014590 328 GGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTH 405 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s 405 (422)
|+.||.|.+|+.++++..+.+.. .+.|..+.| +|.+|..+-
T Consensus 470 Gs~dg~V~iws~~~~~l~~s~~~-------------------------------------~~~Ifel~Wn~~G~kl~~~~ 512 (524)
T KOG0273|consen 470 GSLDGCVHIWSTKTGKLVKSYQG-------------------------------------TGGIFELCWNAAGDKLGACA 512 (524)
T ss_pred cCCCCeeEeccccchheeEeecC-------------------------------------CCeEEEEEEcCCCCEEEEEe
Confidence 99999999999999999998865 245888999 589999999
Q ss_pred CCCeEEEEEcc
Q 014590 406 NSKYIRLWKFN 416 (422)
Q Consensus 406 ~Dg~i~iW~~~ 416 (422)
.||.+++-|+.
T Consensus 513 sd~~vcvldlr 523 (524)
T KOG0273|consen 513 SDGSVCVLDLR 523 (524)
T ss_pred cCCCceEEEec
Confidence 99999998874
No 23
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=3.3e-34 Score=246.92 Aligned_cols=275 Identities=17% Similarity=0.335 Sum_probs=237.7
Q ss_pred EEeeccccceeEEEec---CCeEEEEecCCeEEEEEcCCC----eEE-----------EeeeCCCceeeEEEecCCCeEE
Q 014590 106 DQWKAHSVGVDQCRMK---RGLILTGVGDKVMRLWSLEGY----KCV-----------EEYSLPNAASLVDFDFDESKIV 167 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~~----~~~-----------~~~~~~~~~~~~~~~~~~~~l~ 167 (422)
+.+. |+.+|.+.+|. ++.+++|+.|-+.++|++... ... +.......+..++|+.+|..|+
T Consensus 173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 3444 99999999993 449999999999999998741 111 1122235577899999999999
Q ss_pred -EecCCeEEEEECCCCce-eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCC
Q 014590 168 -GLIGTRICIWRRNGLRS-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQ 245 (422)
Q Consensus 168 -~~~~~~i~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~ 245 (422)
|..+|.+++|+..+... .+..|.+++ ..+.+...+.+|++++.|+++.+||..+|+..+.+..|..+-..+.|-.+.
T Consensus 252 tG~~~G~~riw~~~G~l~~tl~~HkgPI-~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~ 330 (524)
T KOG0273|consen 252 TGSEDGEARIWNKDGNLISTLGQHKGPI-FSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND 330 (524)
T ss_pred EeecCcEEEEEecCchhhhhhhccCCce-EEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc
Confidence 99999999999998874 456666654 356677777889999999999999999999999999999887889998888
Q ss_pred EEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeE
Q 014590 246 LIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 318 (422)
.|++.+.|+.|+++-+....++ +.|.++.|+|.|.+|++++.|++++||+.........+.+|...|+.+. |
T Consensus 331 ~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~-w 409 (524)
T KOG0273|consen 331 EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIK-W 409 (524)
T ss_pred eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEe-e
Confidence 9999999999999998766665 8999999999999999999999999999998999999999999999998 8
Q ss_pred ecCCC---------EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCC
Q 014590 319 QNDTS---------TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRP 389 (422)
Q Consensus 319 s~~~~---------~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~ 389 (422)
+|.|. .+++++.|++|++||+..|.++.+|.. |..
T Consensus 410 sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k------------------------------------H~~ 453 (524)
T KOG0273|consen 410 SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK------------------------------------HQE 453 (524)
T ss_pred cCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc------------------------------------CCC
Confidence 88754 889999999999999999999999865 455
Q ss_pred CeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 390 PITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 390 ~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
+|.+++| ++.++++|+.||.|.+|+.+.++
T Consensus 454 pVysvafS~~g~ylAsGs~dg~V~iws~~~~~ 485 (524)
T KOG0273|consen 454 PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK 485 (524)
T ss_pred ceEEEEecCCCcEEEecCCCCeeEeccccchh
Confidence 9999999 69999999999999999998765
No 24
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=9.4e-34 Score=236.83 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=232.5
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
...+.+|..|++.|.+++. |+. +++||+.|....+|++.+|+....+.+|. .+.++.|+.||.+|+ |..+|.|.+|
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~ 133 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF 133 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence 3467889999999999999 444 99999999999999999999988888874 566799999999999 8999999999
Q ss_pred ECCCCceeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 178 RRNGLRSVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 178 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
...++....... ......-+++.+-...|++|+.||.+-+|.+.++...+.+.+|+.++++-.|.|+ +.++++..||+
T Consensus 134 ~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgt 213 (399)
T KOG0296|consen 134 KVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGT 213 (399)
T ss_pred EcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCce
Confidence 999987554332 3333345666676677999999999999999988889999999999999999987 89999999999
Q ss_pred EEEEeCCCCccc-------------------------------------------------------------cceEeEE
Q 014590 256 IAISGLSSDQRL-------------------------------------------------------------TGIKTLC 274 (422)
Q Consensus 256 i~iwd~~~~~~~-------------------------------------------------------------~~v~~~~ 274 (422)
|++||..+++.+ ..|.++.
T Consensus 214 i~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~ 293 (399)
T KOG0296|consen 214 IIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIP 293 (399)
T ss_pred EEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcc
Confidence 999999998766 1122233
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCc
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGS 354 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 354 (422)
++..-.+.|+|+-||+|.|||+...++...+ .|+..|..+. |-+ ..+|++++.||.|+.||.++|+++.++.+|.
T Consensus 294 ~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~-w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~-- 368 (399)
T KOG0296|consen 294 SSSKLPLAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLK-WLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQ-- 368 (399)
T ss_pred cccccchhhcccccceEEEEecccchhheec-cCCCceEEEE-EcC-cchheeeccCceEEeeeccccceEEEEecCc--
Confidence 3334467889999999999999976655444 5778899999 666 7899999999999999999999999997754
Q ss_pred ccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 355 ASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 355 ~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
..|.+++. +.++++|+|.|++.+|++++
T Consensus 369 ----------------------------------~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 369 ----------------------------------MGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ----------------------------------hheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 48888888 78999999999999999875
No 25
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.3e-33 Score=230.16 Aligned_cols=271 Identities=15% Similarity=0.219 Sum_probs=223.8
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcC-CCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE-GYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w 177 (422)
.++..+.||++.|..+.| |+| +||||+.|..|.+|+.. ..+....+++|.+... +.+..|++.++ ++.|.+++.|
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w 117 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW 117 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence 456788999999999999 777 99999999999999954 3455666777766554 99999999999 8999999999
Q ss_pred ECCCCceee--ecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC
Q 014590 178 RRNGLRSVF--PSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 178 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
|+++++... +.+. ..+..++....++. +.+|+.|+++++||+++.++++++. ..-+++++.|... ..+.+|+-|
T Consensus 118 D~~tG~~~rk~k~h~-~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggId 195 (338)
T KOG0265|consen 118 DAETGKRIRKHKGHT-SFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGID 195 (338)
T ss_pred ecccceeeehhcccc-ceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeecccc
Confidence 999998663 3333 23334444444444 8899999999999999999988875 3567899999865 889999999
Q ss_pred CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC----eeeeeeccCC--Cc--eeeeeeE
Q 014590 254 GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM----KSLWETRISP--NV--VYSLQHL 318 (422)
Q Consensus 254 g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~~~--~~--v~~l~~~ 318 (422)
+.|++||++.+... ..|+.+..+|+|.++.+-+.|.++++||++.. .++..+.+|. -. ....+ |
T Consensus 196 n~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cs-w 274 (338)
T KOG0265|consen 196 NDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCS-W 274 (338)
T ss_pred CceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceee-c
Confidence 99999999887766 89999999999999999999999999999853 4466666653 22 33445 8
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-- 396 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-- 396 (422)
+|++..+.+|+.|..+++||..+...+..+++ |.+.|++++|
T Consensus 275 sp~~~~i~ags~dr~vyvwd~~~r~~lyklpG------------------------------------h~gsvn~~~Fhp 318 (338)
T KOG0265|consen 275 SPNGTKITAGSADRFVYVWDTTSRRILYKLPG------------------------------------HYGSVNEVDFHP 318 (338)
T ss_pred cCCCCccccccccceEEEeecccccEEEEcCC------------------------------------cceeEEEeeecC
Confidence 99999999999999999999988788888866 4558999999
Q ss_pred cCEEEEEEeCCCeEEE
Q 014590 397 GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 397 ~~~~l~s~s~Dg~i~i 412 (422)
....|.+++.|.+|.+
T Consensus 319 ~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 319 TEPIILSCSSDKTIYL 334 (338)
T ss_pred CCcEEEEeccCceeEe
Confidence 4789999999999976
No 26
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.7e-32 Score=248.89 Aligned_cols=248 Identities=18% Similarity=0.286 Sum_probs=211.9
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
+...+||...+.|+++ ||| ++|||+.||.|+|||..+|-|..+|..|.. +..+.|+..++.++ ++.||+|+.||+.
T Consensus 343 VlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 343 VLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred eeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 4556899999999999 677 999999999999999999999999998765 45599999999999 8999999999998
Q ss_pred CCce--eeecCCCceeeeEEEeeeCCeEEEecCCC-eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcE
Q 014590 181 GLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDG-TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (422)
Q Consensus 181 ~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i 256 (422)
..+. .+..+......++++.+.+..+++|+.|. .|.+|++++|+.+..+.+|.+||.+++|+|. +.++++|.|.+|
T Consensus 423 RYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTV 502 (893)
T KOG0291|consen 423 RYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTV 502 (893)
T ss_pred ccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceE
Confidence 8764 45555555555666666677788888774 6999999999999999999999999999986 899999999999
Q ss_pred EEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--------------------CC
Q 014590 257 AISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI--------------------SP 309 (422)
Q Consensus 257 ~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--------------------~~ 309 (422)
++||+-..... ..+..++|+|+|+.+++++-||.|.+||...+..+..+.+ ..
T Consensus 503 RiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~ 582 (893)
T KOG0291|consen 503 RIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKG 582 (893)
T ss_pred EEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccC
Confidence 99998654222 8899999999999999999999999999987655533221 12
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
...+.++ +++||..|++|+..+.|++|++.++..++.+....+
T Consensus 583 K~Ftti~-ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N 625 (893)
T KOG0291|consen 583 KTFTTIC-YSADGKCILAGGESNSICIYDVPEGVLLKKFQISDN 625 (893)
T ss_pred CceEEEE-EcCCCCEEEecCCcccEEEEECchhheeeeEEeccc
Confidence 4578888 999999999999999999999999999999887555
No 27
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.7e-33 Score=235.20 Aligned_cols=268 Identities=19% Similarity=0.219 Sum_probs=220.9
Q ss_pred ccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEe-cCCC--eEE-EecCCeEEEEECCCCce
Q 014590 110 AHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFD-FDES--KIV-GLIGTRICIWRRNGLRS 184 (422)
Q Consensus 110 ~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~-~~~~--~l~-~~~~~~i~~w~~~~~~~ 184 (422)
-|.+.|.++....+.++||+.||.+++||.. |+..+.+.+|.+... +++. ++.. .++ ++.|.++++|..+.+..
T Consensus 103 ~hdDWVSsv~~~~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~ 181 (423)
T KOG0313|consen 103 LHDDWVSSVKGASKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGEN 181 (423)
T ss_pred cchhhhhhhcccCceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchh
Confidence 4889999998887799999999999999976 799999998866543 4443 3332 355 99999999999887653
Q ss_pred e------eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC-------------------------CcceeeeeecCC
Q 014590 185 V------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-------------------------SRKCSQIIRMHC 233 (422)
Q Consensus 185 ~------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-------------------------~~~~~~~~~~~~ 233 (422)
. ..+|...+ ..+.+..++..+++|+.|.+|.||+.+ ++.++-++.+|.
T Consensus 182 ~~~~~~~~~GHk~~V-~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt 260 (423)
T KOG0313|consen 182 KVKALKVCRGHKRSV-DSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHT 260 (423)
T ss_pred hhhHHhHhcccccce-eEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccc
Confidence 3 22333332 345555677779999999999999931 122556678999
Q ss_pred ccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC---eeeee
Q 014590 234 APVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM---KSLWE 304 (422)
Q Consensus 234 ~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~---~~~~~ 304 (422)
++|.++.|++...+++++.|.+|+.||+.++... ..+++++++|..++|++|+.|..|++||.+++ -...+
T Consensus 261 ~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s 340 (423)
T KOG0313|consen 261 EPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQS 340 (423)
T ss_pred cceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEe
Confidence 9999999988789999999999999999999887 78999999999999999999999999999975 34567
Q ss_pred eccCCCceeeeeeEecCCC-EEEEEecCCeEEEEECCCCc-eEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 305 TRISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTGE-VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 305 ~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
+.+|.+.|.++. ++|... .|++|+.|+++++||+++.+ ++..+.+|
T Consensus 341 ~~gH~nwVssvk-wsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h------------------------------- 388 (423)
T KOG0313|consen 341 LIGHKNWVSSVK-WSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGH------------------------------- 388 (423)
T ss_pred eecchhhhhhee-cCCCCceEEEEEecCCeEEEEEeccCCCcceeeccC-------------------------------
Confidence 899999999999 777665 68899999999999999877 88888664
Q ss_pred CCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEcc
Q 014590 383 IPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 383 ~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~ 416 (422)
...|.++.| ++.+|+|||.|.+|+|+.-.
T Consensus 389 -----~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 389 -----NDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred -----CceEEEEeccCCceEEeccCcceEEEeccc
Confidence 458999999 57799999999999998754
No 28
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4e-32 Score=246.49 Aligned_cols=312 Identities=15% Similarity=0.202 Sum_probs=243.5
Q ss_pred eeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeE--EEeeeCCCceee-EEEecCCCeEE-EecCCeEEEE
Q 014590 104 DIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKC--VEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+.+++.||-+.|.++.|+++ +|++||.|-++++|+++..+- ...+.+|....+ .-|..+...++ .+.||.+.+|
T Consensus 137 l~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W 216 (893)
T KOG0291|consen 137 LHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVW 216 (893)
T ss_pred EeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEE
Confidence 55788999999999999655 999999999999999987666 455566655544 55666777777 9999999999
Q ss_pred ECCCC-----------------------ce-----eeecC-----CCceeeeEEEeee--CCeEEEecCCCeEEEEeCCC
Q 014590 178 RRNGL-----------------------RS-----VFPSR-----EGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYS 222 (422)
Q Consensus 178 ~~~~~-----------------------~~-----~~~~~-----~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~ 222 (422)
..... +. .+... ......+.|..+. ...|++|-..|...+|++..
T Consensus 217 ~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~ 296 (893)
T KOG0291|consen 217 TCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPD 296 (893)
T ss_pred EecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCC
Confidence 76511 00 00000 0000222333332 23489999999999999999
Q ss_pred cceeeeeecCCccEEEEEecC-CCEEEEEcCC-CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEE
Q 014590 223 RKCSQIIRMHCAPVTSLSLSE-DQLIISGSSL-GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASC 293 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d-g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~i 293 (422)
-.+++.+.-...+|..++|+. ++.++.|+.. |++.+|+.++...+ ..+++++++|||+++|+|++||+|+|
T Consensus 297 f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKv 376 (893)
T KOG0291|consen 297 FNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKV 376 (893)
T ss_pred ceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEE
Confidence 999999987788999999984 5888888654 89999999877665 78999999999999999999999999
Q ss_pred EECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc-cccCCCCCCeEE-----
Q 014590 294 WDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA-SSSSNKVSGVIE----- 367 (422)
Q Consensus 294 wd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~-~~~~~s~d~~i~----- 367 (422)
||..++-++.++..|+..|+.+. |+..|+.+++.|-||+|+.||+...+..++|....... ..++..+.|.+.
T Consensus 377 Wn~~SgfC~vTFteHts~Vt~v~-f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~ 455 (893)
T KOG0291|consen 377 WNTQSGFCFVTFTEHTSGVTAVQ-FTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQ 455 (893)
T ss_pred EeccCceEEEEeccCCCceEEEE-EEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeecc
Confidence 99999999999999999999999 99999999999999999999999999988887654432 233333334332
Q ss_pred ---eeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 368 ---RNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 368 ---~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
....|.+.++..+. ...+|.++|.+++| ++..|+|+|.|.+||+|++=.
T Consensus 456 d~F~IfvWS~qTGqllD-iLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 456 DSFEIFVWSVQTGQLLD-ILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFS 509 (893)
T ss_pred ceEEEEEEEeecCeeee-hhcCCCCcceeeEEccccCeEEeccccceEEEEEeec
Confidence 12234444444343 45889999999888 689999999999999999743
No 29
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=223.74 Aligned_cols=241 Identities=15% Similarity=0.183 Sum_probs=210.9
Q ss_pred EEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC
Q 014590 145 VEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY 221 (422)
Q Consensus 145 ~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 221 (422)
.+++++|. .+..+.|++|.++++ ++.||.+.|||.-+...+ .......-+...+++|.++.++.|+.|+...||++.
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls 127 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLS 127 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecc
Confidence 36677764 456699999999999 999999999998766543 334444445567788889999999999999999997
Q ss_pred Cc------ceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEec-CCCEEEEEeC
Q 014590 222 SR------KCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNP-CSRLVFAGTT 287 (422)
Q Consensus 222 ~~------~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~-~~~~l~~g~~ 287 (422)
+. +..+.+.+|.+.+.+..|.+|+.++++|.|.++.+||+++++.+ +.|.+++++| +++.+++|+-
T Consensus 128 ~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~c 207 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGC 207 (343)
T ss_pred cccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccc
Confidence 55 34566889999999999998999999999999999999999988 8999999999 9999999999
Q ss_pred CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEE
Q 014590 288 AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIE 367 (422)
Q Consensus 288 dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 367 (422)
|+..++||++.+.+++++.+|+..|+++. |.|+|.-+++|++|++.++||++..+.+..|.....
T Consensus 208 D~~aklWD~R~~~c~qtF~ghesDINsv~-ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~-------------- 272 (343)
T KOG0286|consen 208 DKSAKLWDVRSGQCVQTFEGHESDINSVR-FFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSI-------------- 272 (343)
T ss_pred ccceeeeeccCcceeEeecccccccceEE-EccCCCeeeecCCCceeEEEeecCCcEEeeeccCcc--------------
Confidence 99999999999999999999999999999 779999999999999999999999988888864222
Q ss_pred eeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 368 RNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
..+|++++| .|++|+.|..|.++.+||.-.++.
T Consensus 273 --------------------~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~ 307 (343)
T KOG0286|consen 273 --------------------ICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGER 307 (343)
T ss_pred --------------------cCCceeEEEcccccEEEeeecCCceeEeeccccce
Confidence 358999999 699999999999999999876653
No 30
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1e-32 Score=258.01 Aligned_cols=277 Identities=23% Similarity=0.395 Sum_probs=232.8
Q ss_pred eEEeecc-ccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe--EEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 105 IDQWKAH-SVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 105 ~~~l~~H-~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
...+.+| ...|.++.| ++| ++++++.|+.+++|+..+++ .+..+.+|.. +..++|+|++..++ ++.|+++++|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIW 230 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEe
Confidence 4556565 889999999 577 99999999999999998777 6677666544 45599999999999 9999999999
Q ss_pred ECCCC-c--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC
Q 014590 178 RRNGL-R--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 178 ~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
|+... . .++.+|...+ ..+++.+.+..+++|+.|++|++||+++++++..+.+|.+.|.+++|+++ +++++++.|
T Consensus 231 d~~~~~~~~~~l~gH~~~v-~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d 309 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYV-TSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYD 309 (456)
T ss_pred eccCCCeEEEEecCCCCce-EEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCC
Confidence 99544 3 2344454444 56777777877999999999999999999999999999999999999976 899999999
Q ss_pred CcEEEEeCCCCc--cc--------c-ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee--eEec
Q 014590 254 GSIAISGLSSDQ--RL--------T-GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ--HLQN 320 (422)
Q Consensus 254 g~i~iwd~~~~~--~~--------~-~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~--~~s~ 320 (422)
+.|++||+.++. +. . .++++.|+|++.++++++.|+.+++||+..+..+..+.+|...+.++. ..++
T Consensus 310 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (456)
T KOG0266|consen 310 GTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLST 389 (456)
T ss_pred ccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccC
Confidence 999999999998 22 3 689999999999999999999999999999999999999987544432 1467
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cC
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GM 398 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~ 398 (422)
.+.++++|+.|+.|++||+.++..+..+.+|. ...+..+++ ..
T Consensus 390 ~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-----------------------------------~~~~~~~~~~~~~ 434 (456)
T KOG0266|consen 390 GGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS-----------------------------------KAAVSDLSSHPTE 434 (456)
T ss_pred CCCeEEEEeCCceEEEEeCCccchhhhhcCCC-----------------------------------CCceeccccCCCc
Confidence 89999999999999999999988888876642 346777777 47
Q ss_pred EEEEEEe--CCCeEEEEEccC
Q 014590 399 KKVVTTH--NSKYIRLWKFNY 417 (422)
Q Consensus 399 ~~l~s~s--~Dg~i~iW~~~~ 417 (422)
+++++++ .|+.+++|..+.
T Consensus 435 ~~~~s~s~~~d~~~~~w~~~~ 455 (456)
T KOG0266|consen 435 NLIASSSFEGDGLIRLWKYDF 455 (456)
T ss_pred CeeeecCcCCCceEEEecCCC
Confidence 8888888 799999998653
No 31
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-34 Score=227.48 Aligned_cols=277 Identities=16% Similarity=0.208 Sum_probs=241.8
Q ss_pred EEeeccccceeEEEe----cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEEEE
Q 014590 106 DQWKAHSVGVDQCRM----KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~----~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
.+-.||+.+|..++| ++| +|++++.|+.=.+-+-++|..+.+|.+|.+..- ..+..+....+ ++.|-+.++||
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD 87 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence 467899999999999 477 999999999999999999999999999977654 55555555555 88899999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-eeeeeecCCccEEEEEec-CCCEEEEEcCCCcE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-CSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSI 256 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i 256 (422)
.-++..+......|++..+++..+.++|++|+.+..++++|++..+ +...+.+|++.|..+.|. .++.+++.+.|++|
T Consensus 88 a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tV 167 (334)
T KOG0278|consen 88 AVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTV 167 (334)
T ss_pred hhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCce
Confidence 9999988888888999999999999999999999999999998764 567788999999999998 45889999999999
Q ss_pred EEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 257 AISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 257 ~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
++||.+++..+ .+|+++.++++|+++.++.. +.|..||..+..++..+... ..|.+.. .+|+...+++|++
T Consensus 168 RLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~g-ssV~Fwdaksf~~lKs~k~P-~nV~SAS-L~P~k~~fVaGge 244 (334)
T KOG0278|consen 168 RLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYG-SSVKFWDAKSFGLLKSYKMP-CNVESAS-LHPKKEFFVAGGE 244 (334)
T ss_pred EEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecC-ceeEEeccccccceeeccCc-ccccccc-ccCCCceEEecCc
Confidence 99999999887 89999999999998877764 56999999998888877654 4588888 8999999999999
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
|+.++.||..+|+.+..+ .++|-++|-|+.| +|...++||+||
T Consensus 245 d~~~~kfDy~TgeEi~~~-----------------------------------nkgh~gpVhcVrFSPdGE~yAsGSEDG 289 (334)
T KOG0278|consen 245 DFKVYKFDYNTGEEIGSY-----------------------------------NKGHFGPVHCVRFSPDGELYASGSEDG 289 (334)
T ss_pred ceEEEEEeccCCceeeec-----------------------------------ccCCCCceEEEEECCCCceeeccCCCc
Confidence 999999999999988775 1456679999999 789999999999
Q ss_pred eEEEEEccCCCC
Q 014590 409 YIRLWKFNYSDK 420 (422)
Q Consensus 409 ~i~iW~~~~~~~ 420 (422)
+|++|....++.
T Consensus 290 TirlWQt~~~~~ 301 (334)
T KOG0278|consen 290 TIRLWQTTPGKT 301 (334)
T ss_pred eEEEEEecCCCc
Confidence 999999876654
No 32
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.9e-34 Score=238.88 Aligned_cols=278 Identities=16% Similarity=0.234 Sum_probs=226.0
Q ss_pred eeeEEeeccccceeEEEecCC---eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEEEecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRMKRG---LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~---~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
..+..|.||.+.|.|++-+.+ .++||+.||.|+|||+...+++.++..|.+.. -+++.. +..+.++.|.+|+.|.
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK~wk 135 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVKQWK 135 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCcceeeee
Confidence 356788999999999998544 89999999999999999999999999987543 377766 5555599999999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSI 256 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i 256 (422)
++.+. ....+.......+.....+..+++++. .|.|||.+...++..+.--.+.|.++.|+|. ..|++++.|+.|
T Consensus 136 ~~~~p-~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsI 212 (433)
T KOG0268|consen 136 IDGPP-LHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSI 212 (433)
T ss_pred ccCCc-ceeeeccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCce
Confidence 88742 111111222223333334445777765 5999999988999999877889999999986 788999999999
Q ss_pred EEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 257 AISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 257 ~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
.+||++++..+ ..-+.++|+|.+-.+++|++|..++.||++.. .++....+|.+.|.+++ |||.|+-+++||
T Consensus 213 vLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVd-fsptG~Efvsgs 291 (433)
T KOG0268|consen 213 VLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVD-FSPTGQEFVSGS 291 (433)
T ss_pred EEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEec-cCCCcchhcccc
Confidence 99999999887 67788999998888999999999999999964 67788899999999999 999999999999
Q ss_pred cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCC
Q 014590 330 IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNS 407 (422)
Q Consensus 330 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~D 407 (422)
.|.+|+||....+.....+.... -+.|.|+.| |.++++|||+|
T Consensus 292 yDksIRIf~~~~~~SRdiYhtkR-----------------------------------Mq~V~~Vk~S~Dskyi~SGSdd 336 (433)
T KOG0268|consen 292 YDKSIRIFPVNHGHSRDIYHTKR-----------------------------------MQHVFCVKYSMDSKYIISGSDD 336 (433)
T ss_pred ccceEEEeecCCCcchhhhhHhh-----------------------------------hheeeEEEEeccccEEEecCCC
Confidence 99999999998665444332211 157899999 79999999999
Q ss_pred CeEEEEEccCCCC
Q 014590 408 KYIRLWKFNYSDK 420 (422)
Q Consensus 408 g~i~iW~~~~~~~ 420 (422)
+.|++|.....++
T Consensus 337 ~nvRlWka~Asek 349 (433)
T KOG0268|consen 337 GNVRLWKAKASEK 349 (433)
T ss_pred cceeeeecchhhh
Confidence 9999999776544
No 33
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.2e-32 Score=216.46 Aligned_cols=252 Identities=15% Similarity=0.192 Sum_probs=213.6
Q ss_pred ccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe--EEEeeeCC-CceeeEEEecCCCeEE-EecCCe
Q 014590 100 EGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLP-NAASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 100 ~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
..+.+.++++-..+.|..+.. +++ .||+++. ..||+||+.++. ++.+|.+| ..+.++.|..+|+.++ ++.||+
T Consensus 28 ~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt 106 (311)
T KOG0315|consen 28 LTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGT 106 (311)
T ss_pred hcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCce
Confidence 356788999988899999999 666 6776664 689999998864 68899998 6677899999999999 999999
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCccEEEEEecCC-CEEEEEc
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
++|||+........-.....+..+.+.+....|++|..+|.|++||+....+...+ .....+|.++...|+ .+++.+.
T Consensus 107 ~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~n 186 (311)
T KOG0315|consen 107 VKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAAN 186 (311)
T ss_pred EEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEec
Confidence 99999998653322222244556677777777999999999999999887665544 344568999999987 7899999
Q ss_pred CCCcEEEEeCCCCccc-------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeee
Q 014590 252 SLGSIAISGLSSDQRL-------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQH 317 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~ 317 (422)
..|.+++|++-+.+.. +.+..+.+|||+++||+++.|.+++||++++. +....+.+|+..++..+
T Consensus 187 nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~- 265 (311)
T KOG0315|consen 187 NKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCA- 265 (311)
T ss_pred CCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeee-
Confidence 9999999999775543 78899999999999999999999999999987 66678899999999999
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
||.||+||++|+.|+.+++||+..++.++.+.+|..
T Consensus 266 FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K 301 (311)
T KOG0315|consen 266 FSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHK 301 (311)
T ss_pred eccCccEEEecCCCCceeecccccCceeeecCCccc
Confidence 999999999999999999999999999999977665
No 34
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=8.2e-34 Score=259.33 Aligned_cols=201 Identities=24% Similarity=0.381 Sum_probs=182.9
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEEEecCCeEEEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIW 177 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~w 177 (422)
.....++|.||.++|..+.| |+. +|+++|.|++||+|.+.+..++-.+++|...+. +.|+|-
T Consensus 440 ~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~--------------- 504 (707)
T KOG0263|consen 440 SSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR--------------- 504 (707)
T ss_pred CCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC---------------
Confidence 34456779999999999999 555 999999999999999999999988888754432 444444
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcE
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i 256 (422)
+-++|+++.|++-++|.....++++.+.+|.+.|.|+.|+|+ +++++||.|.++
T Consensus 505 -------------------------GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tV 559 (707)
T KOG0263|consen 505 -------------------------GYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTV 559 (707)
T ss_pred -------------------------ceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceE
Confidence 444899999999999999999999999999999999999998 899999999999
Q ss_pred EEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 257 AISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 257 ~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
++||+.+|..+ ++|.+++|+|+|++|++|+.||.|.+||+.+++++..+.+|++.|+++. |+.+|..||+|+
T Consensus 560 RlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~Sls-FS~dg~vLasgg 638 (707)
T KOG0263|consen 560 RLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLS-FSRDGNVLASGG 638 (707)
T ss_pred EEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEE-EecCCCEEEecC
Confidence 99999999987 9999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCCeEEEEECCCC
Q 014590 330 IDGVLRVLDQNTG 342 (422)
Q Consensus 330 ~dg~v~vwd~~~~ 342 (422)
.|.+|++||+..-
T Consensus 639 ~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 639 ADNSVRLWDLTKV 651 (707)
T ss_pred CCCeEEEEEchhh
Confidence 9999999998743
No 35
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2.2e-31 Score=232.54 Aligned_cols=239 Identities=19% Similarity=0.305 Sum_probs=194.8
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEE--EeeeC-CCceeeEEEecCCCeEEEecC-----Ce
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCV--EEYSL-PNAASLVDFDFDESKIVGLIG-----TR 173 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~~~~-----~~ 173 (422)
....+.+|..+++-..| |.| |+|+|...|+|||||....+.+ .+|+. ...+.-++|++|+..|++..+ |.
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~ 130 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGH 130 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeE
Confidence 45677899999999999 667 9999999999999998653332 33333 233455999999999995444 35
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
+.+||..+..-.+.++... +..+.+.+..|+ +++|+.|++|.+|+-.--+...+++.|...|+++.|+|| .+|++++
T Consensus 131 ~F~~DSG~SvGei~GhSr~-ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~g 209 (603)
T KOG0318|consen 131 VFLWDSGNSVGEITGHSRR-INSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAG 209 (603)
T ss_pred EEEecCCCccceeecccee-EeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEec
Confidence 7778776654444444433 335566666676 999999999999997766777788899999999999998 8999999
Q ss_pred CCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee--------------------
Q 014590 252 SLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS-------------------- 301 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-------------------- 301 (422)
.||++.+||=.+++.+ +.|.+++|+||+..+++++.|.+++|||+.+.++
T Consensus 210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq 289 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ 289 (603)
T ss_pred CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe
Confidence 9999999999999877 8999999999999999999999999999876532
Q ss_pred -----------------------eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 302 -----------------------LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 302 -----------------------~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
+..+.+|...|+++. .+|++++|++|+.||.|.-|+..+|..
T Consensus 290 kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt-v~~d~~~i~SgsyDG~I~~W~~~~g~~ 354 (603)
T KOG0318|consen 290 KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT-VSPDGKTIYSGSYDGHINSWDSGSGTS 354 (603)
T ss_pred CCeEEEEEcCcEEEEecccCCChhheecccccceeEEE-EcCCCCEEEeeccCceEEEEecCCccc
Confidence 234568888999999 999999999999999999999887643
No 36
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=3.5e-34 Score=237.99 Aligned_cols=236 Identities=17% Similarity=0.256 Sum_probs=203.0
Q ss_pred eeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCC
Q 014590 103 IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG 181 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~ 181 (422)
...+.|.||++.|.|+.|.+..+++||.|.+|+|||.++|+++.++-+|. ..++.+-..+.+++ ++.|.++.+||+..
T Consensus 228 ~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHc-eaVLhlrf~ng~mvtcSkDrsiaVWdm~s 306 (499)
T KOG0281|consen 228 ECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHC-EAVLHLRFSNGYMVTCSKDRSIAVWDMAS 306 (499)
T ss_pred HHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhc-ceeEEEEEeCCEEEEecCCceeEEEeccC
Confidence 45678999999999999998899999999999999999999999988764 34555666677777 99999999999987
Q ss_pred Ccee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEE
Q 014590 182 LRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAIS 259 (422)
Q Consensus 182 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iw 259 (422)
+..+ .....||...+..+.++++++++++.|.+|++|++.+++.+.++.+|...|.|+.+ .+.++++|+.|.+|++|
T Consensus 307 ps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlw 385 (499)
T KOG0281|consen 307 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLW 385 (499)
T ss_pred chHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhc-cCeEEEecCCCceEEEE
Confidence 7632 23334555556677788889999999999999999999999999999999999988 67899999999999999
Q ss_pred eCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe---------eeeeeccCCCceeeeeeEecCCC
Q 014590 260 GLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK---------SLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 260 d~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
|+..|.++ .-|.++.| |.+.+++|..||+|++||+.++. ++.++..|.+.|..+. | |..
T Consensus 386 di~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQ-F--D~f 460 (499)
T KOG0281|consen 386 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ-F--DEF 460 (499)
T ss_pred eccccHHHHHHhchHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEe-e--cce
Confidence 99999988 77999999 67799999999999999998753 3456677899999999 6 677
Q ss_pred EEEEEecCCeEEEEECCCCceE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
.+++++.|.+|.|||+.++.+-
T Consensus 461 qIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 461 QIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred EEEeccCCCeEEEEEcCCCCcc
Confidence 8999999999999999877554
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=6.7e-31 Score=263.74 Aligned_cols=281 Identities=13% Similarity=0.127 Sum_probs=218.4
Q ss_pred eeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC----e----EEEeeeCCCceeeEEEec-CCCeEE-EecCCeEE
Q 014590 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY----K----CVEEYSLPNAASLVDFDF-DESKIV-GLIGTRIC 175 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~----~----~~~~~~~~~~~~~~~~~~-~~~~l~-~~~~~~i~ 175 (422)
+.+|.+.|.+++| ++| +||||+.|+.|+|||..+. . ....+..+..+..++|++ ++..++ ++.|++|+
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~ 558 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQ 558 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEE
Confidence 4569999999999 566 9999999999999997542 1 223334445556688877 466777 88899999
Q ss_pred EEECCCCcee--eecCCCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEE
Q 014590 176 IWRRNGLRSV--FPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISG 250 (422)
Q Consensus 176 ~w~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~ 250 (422)
+||+.+++.+ +..+.+. +..+++.+ .+..|++|+.|++|++||+++++.+..+..+ ..+.++.|++ + .++++|
T Consensus 559 lWd~~~~~~~~~~~~H~~~-V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latg 636 (793)
T PLN00181 559 VWDVARSQLVTEMKEHEKR-VWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFG 636 (793)
T ss_pred EEECCCCeEEEEecCCCCC-EEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEE
Confidence 9999887644 3333332 33455553 4456999999999999999999988888754 6789999964 3 799999
Q ss_pred cCCCcEEEEeCCCCcc-c-------cceEeEEEecCCCEEEEEeCCCeEEEEECCC------CeeeeeeccCCCceeeee
Q 014590 251 SSLGSIAISGLSSDQR-L-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT------MKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~-~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~------~~~~~~~~~~~~~v~~l~ 316 (422)
+.||.|++||++++.. . ..|.++.|. ++.++++++.|+.|++||++. ..++.++.+|...+.+++
T Consensus 637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~ 715 (793)
T PLN00181 637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVG 715 (793)
T ss_pred eCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEE
Confidence 9999999999987653 2 689999996 788999999999999999974 356788999999999998
Q ss_pred eEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe
Q 014590 317 HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV 396 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~ 396 (422)
++|++++|++|+.||.|++|+.....++..+....... + .......|...|.+++|
T Consensus 716 -~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~----------~-------------~~~~~~~~~~~V~~v~w 771 (793)
T PLN00181 716 -LSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDP----------V-------------SGLEVDDASQFISSVCW 771 (793)
T ss_pred -EcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCc----------c-------------cccccCCCCcEEEEEEE
Confidence 99999999999999999999987776555443211100 0 00001345678999999
Q ss_pred --cCEEEEEEeCCCeEEEEEc
Q 014590 397 --GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 397 --~~~~l~s~s~Dg~i~iW~~ 415 (422)
++..|++|+.||.|+||++
T Consensus 772 s~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 772 RGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred cCCCCeEEEecCCCcEEEEec
Confidence 5789999999999999986
No 38
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-31 Score=237.35 Aligned_cols=242 Identities=17% Similarity=0.261 Sum_probs=211.5
Q ss_pred EeeccccceeEEEecC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 107 QWKAHSVGVDQCRMKR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
++..|++.|.++.+++ . .++++-..|.|.|||.++...++.|... .++....|-.--+.++ |+.|..|++|+.++.
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ 87 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG 87 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccc
Confidence 4556899999999954 4 8888899999999999999999999875 3456688888888888 999999999999998
Q ss_pred cee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEE
Q 014590 183 RSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIA 257 (422)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~ 257 (422)
+.+ +..|.+ .+..+++.+..|+++++|.|-+|++||.+.+ .+.+++++|+..|.+++|+|. +.+++++-|++|+
T Consensus 88 ekV~~FeAH~D-yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVK 166 (794)
T KOG0276|consen 88 EKVKTFEAHSD-YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVK 166 (794)
T ss_pred eeeEEeecccc-ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEE
Confidence 865 455544 4568889999999999999999999999765 688999999999999999985 8999999999999
Q ss_pred EEeCCCCccc-------cceEeEEEecCC--CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCS--RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
+|.+.+.... ..|+|+++-+-| .+|++|+.|.+|+|||..+..+++++.+|...|..+. |+|.-..+++|
T Consensus 167 VWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~-fhp~lpiiisg 245 (794)
T KOG0276|consen 167 VWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVF-FHPELPIIISG 245 (794)
T ss_pred EEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEE-ecCCCcEEEEe
Confidence 9999876655 889999997654 6999999999999999999999999999999999998 99999999999
Q ss_pred ecCCeEEEEECCCCceEEEeee
Q 014590 329 GIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
++||+|+||+..+-+...++..
T Consensus 246 sEDGTvriWhs~Ty~lE~tLn~ 267 (794)
T KOG0276|consen 246 SEDGTVRIWNSKTYKLEKTLNY 267 (794)
T ss_pred cCCccEEEecCcceehhhhhhc
Confidence 9999999999887666555544
No 39
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=2.5e-31 Score=221.82 Aligned_cols=225 Identities=16% Similarity=0.238 Sum_probs=195.7
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------ 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------ 267 (422)
.++++.+.+..+++|+.|++|+|||+.+|+...++.+|-..|..+++++- .++++++.|++|+.||++..+.+
T Consensus 155 r~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGH 234 (460)
T KOG0285|consen 155 RSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGH 234 (460)
T ss_pred EEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccc
Confidence 34555566667999999999999999999999999999999999999976 89999999999999999998887
Q ss_pred -cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEE
Q 014590 268 -TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 268 -~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 346 (422)
+.|.+++.+|.-..|++|+.|.++++||+++...+..+.+|..+|.++. +.|-...+++||.|++|++||+..|+...
T Consensus 235 lS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~-~~~~dpqvit~S~D~tvrlWDl~agkt~~ 313 (460)
T KOG0285|consen 235 LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVM-CQPTDPQVITGSHDSTVRLWDLRAGKTMI 313 (460)
T ss_pred cceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEE-eecCCCceEEecCCceEEEeeeccCceeE
Confidence 8999999999999999999999999999999999999999999999998 88878889999999999999999999988
Q ss_pred EeeecCCcccccCCCCCCeEE------eeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccCCC
Q 014590 347 RCVMDIGSASSSSNKVSGVIE------RNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 347 ~~~~~~~~~~~~~~s~d~~i~------~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
++..|...+..++..++.... ....|.++.+..+.. ..+|...|++++. +..++++|++.|.+.+||..++.
T Consensus 314 tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~n-lsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 314 TLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQN-LSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred eeecccceeeEEecCCchhhhhccCCccceeccCCccchhhc-cccccceeeeeeeccCceEEEcCCceEEEEEecCcCc
Confidence 888877766555444433332 123456666666666 5789999999999 57899999999999999998876
Q ss_pred CC
Q 014590 420 KY 421 (422)
Q Consensus 420 ~~ 421 (422)
+|
T Consensus 393 ny 394 (460)
T KOG0285|consen 393 NY 394 (460)
T ss_pred cc
Confidence 54
No 40
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.4e-32 Score=225.77 Aligned_cols=236 Identities=19% Similarity=0.311 Sum_probs=209.4
Q ss_pred ceeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCC-CeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEG-YKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
++..+.|+||++.|..++|+ .| ++++++.|-.+++||.++ .++++...+|+. +..+.|-|.|.+++ ++.|.+|+.
T Consensus 140 g~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~ 219 (406)
T KOG0295|consen 140 GELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA 219 (406)
T ss_pred hhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence 34567789999999999995 55 999999999999999987 466666666644 45699999999999 999999999
Q ss_pred EECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-----------
Q 014590 177 WRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE----------- 243 (422)
Q Consensus 177 w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~----------- 243 (422)
|+..++..+ +..+.. -+..+.+..++..+++++.|.++++|-+.++++...++.|..+|.+++|.|
T Consensus 220 We~~tg~cv~t~~~h~e-wvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at 298 (406)
T KOG0295|consen 220 WECDTGYCVKTFPGHSE-WVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEAT 298 (406)
T ss_pred EecccceeEEeccCchH-hEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhcc
Confidence 999999865 444444 456777777777899999999999999999999999999999999999865
Q ss_pred C-----CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCc
Q 014590 244 D-----QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNV 311 (422)
Q Consensus 244 ~-----~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 311 (422)
+ +++.+++.|++|++||+.++.++ ..|..++|+|.|+||+++..|+++++||+++++++.++..|+.-
T Consensus 299 ~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hf 378 (406)
T KOG0295|consen 299 GSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHF 378 (406)
T ss_pred CCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcce
Confidence 1 48999999999999999999988 89999999999999999999999999999999999999999999
Q ss_pred eeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 312 VYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
|+++. |+.+..++++|+-|.++++|..
T Consensus 379 vt~lD-fh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 379 VTSLD-FHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred eEEEe-cCCCCceEEeccccceeeeeec
Confidence 99999 9888899999999999999974
No 41
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.1e-31 Score=239.88 Aligned_cols=265 Identities=20% Similarity=0.276 Sum_probs=224.5
Q ss_pred EEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCc
Q 014590 106 DQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~ 183 (422)
.++.||...|.+++++++ .++|| ..+.+++|+..+.+++.++... ..
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~kciRTi~~~-y~----------------------------- 415 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTLKCIRTITCG-YI----------------------------- 415 (888)
T ss_pred eeeccchhheeEEEeecCceeeeec-CCCcEEEEEccCcceeEEeccc-cE-----------------------------
Confidence 456789999999999655 44444 4578999999999999888654 11
Q ss_pred eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC
Q 014590 184 SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~ 262 (422)
-..++.+.+.++++|...|.+.++|+.+...+.++++|.+.|++++.+|+ ..+++||.|.+|++||..
T Consensus 416 -----------l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~ 484 (888)
T KOG0306|consen 416 -----------LASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFK 484 (888)
T ss_pred -----------EEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEE
Confidence 23445555566899999999999999999999999999999999999988 789999999999999974
Q ss_pred CCcc--------c-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 263 SDQR--------L-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 263 ~~~~--------~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
--.. + ..|.|+.+||||++|+++--|++|++|-+.+.+..-.+.||.-+|.|+. .|||++
T Consensus 485 l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smD-IS~DSk 563 (888)
T KOG0306|consen 485 LVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMD-ISPDSK 563 (888)
T ss_pred EEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEe-ccCCcC
Confidence 2111 1 8899999999999999999999999999999999999999999999999 999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITC 393 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 393 (422)
.++|||.|..|+||-+.=|.|-+.+.+|.+.+ ...+.+.|+.++-|++..+.. +. ...+|...|+|
T Consensus 564 livTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~---iq-~L~~H~~ev~c 639 (888)
T KOG0306|consen 564 LIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEE---IQ-KLDGHHSEVWC 639 (888)
T ss_pred eEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhh---he-eeccchheeee
Confidence 99999999999999999999999999988875 456777888888877766543 22 23678889999
Q ss_pred EEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 394 LAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 394 i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
++. +|.+++|+|.|.+|++|.-..
T Consensus 640 Lav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 640 LAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred eEEcCCCCeEEeccCCceeEeeeccC
Confidence 998 799999999999999998654
No 42
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.98 E-value=4.1e-32 Score=215.99 Aligned_cols=241 Identities=17% Similarity=0.188 Sum_probs=211.7
Q ss_pred cceeeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
.+.-+.+|+||.++|++.....+ ..++++.|=+.+|||.-+|..++.|.+.+-+..++|+.|.+.|+ ++.+.-+++|
T Consensus 48 tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvf 127 (334)
T KOG0278|consen 48 TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVF 127 (334)
T ss_pred CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhh
Confidence 35678899999999999999655 88999999999999999999999999988888999999999999 8999999999
Q ss_pred ECCCCceee---ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCC
Q 014590 178 RRNGLRSVF---PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLG 254 (422)
Q Consensus 178 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg 254 (422)
|++..+... ..+.+.+ ..+-|+...+.+++.+.|++||+||.+++..++++. ...+|+++.+++++.+++....+
T Consensus 128 dln~p~App~E~~ghtg~I-r~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gs 205 (334)
T KOG0278|consen 128 DLNRPKAPPKEISGHTGGI-RTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGS 205 (334)
T ss_pred hccCCCCCchhhcCCCCcc-eeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCc
Confidence 999877543 4444443 234445556668888999999999999999999987 46789999999987788888889
Q ss_pred cEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee-ccCCCceeeeeeEecCCCEEEE
Q 014590 255 SIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET-RISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 255 ~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~s~~~~~l~s 327 (422)
.|.+||..+...+ ..|.+..++|+...+++|++|..++.||..+++.+..+ ++|.++|.|+. |+|+|..-++
T Consensus 206 sV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVr-FSPdGE~yAs 284 (334)
T KOG0278|consen 206 SVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVR-FSPDGELYAS 284 (334)
T ss_pred eeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEE-ECCCCceeec
Confidence 9999999887776 78899999999999999999999999999999998886 89999999999 9999999999
Q ss_pred EecCCeEEEEECCCCce
Q 014590 328 GGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~ 344 (422)
||+||+|++|....++.
T Consensus 285 GSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 285 GSEDGTIRLWQTTPGKT 301 (334)
T ss_pred cCCCceEEEEEecCCCc
Confidence 99999999999876554
No 43
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.98 E-value=1.2e-30 Score=212.92 Aligned_cols=234 Identities=16% Similarity=0.201 Sum_probs=202.9
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE--EecCCeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV--GLIGTRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~~~~~~i~~w 177 (422)
+....++||.++|..+.| .|+ .+++++.|++|+.||.++|++++.+++|..... +.-+.-|..++ ++.|+++++|
T Consensus 81 eN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~ 160 (338)
T KOG0265|consen 81 ENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLW 160 (338)
T ss_pred cceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEE
Confidence 345678899999999999 566 999999999999999999999999999876644 55444566666 7889999999
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcE
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i 256 (422)
|+.+...+...........+++...+..+.+|+-|+.|++||++.+....++.+|.++|+.+..+++ .++.+-+.|.++
T Consensus 161 D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tv 240 (338)
T KOG0265|consen 161 DIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTV 240 (338)
T ss_pred eecccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceE
Confidence 9998776544444445556777777778999999999999999999999999999999999999986 899999999999
Q ss_pred EEEeCCCCcc----c-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC
Q 014590 257 AISGLSSDQR----L-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 257 ~iwd~~~~~~----~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
++||++-... + .....++|+|+++.+.+|+.|..+++||......+..+.+|.+.|++++ |+|.
T Consensus 241 rvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~-Fhp~ 319 (338)
T KOG0265|consen 241 RVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVD-FHPT 319 (338)
T ss_pred EEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEee-ecCC
Confidence 9999975332 2 4456788999999999999999999999998899999999999999999 9999
Q ss_pred CCEEEEEecCCeEEEE
Q 014590 322 TSTLVVGGIDGVLRVL 337 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vw 337 (422)
...|.+++.|.+|++=
T Consensus 320 e~iils~~sdk~i~lg 335 (338)
T KOG0265|consen 320 EPIILSCSSDKTIYLG 335 (338)
T ss_pred CcEEEEeccCceeEee
Confidence 9999999999999863
No 44
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.98 E-value=5.1e-32 Score=229.49 Aligned_cols=227 Identities=15% Similarity=0.258 Sum_probs=197.5
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCc--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI 228 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 228 (422)
..+..+.|.|+|+.|+ |+..|.+.+|+..+.. .+.+.|+ ..+..+.++.++..+++|..+|.|++|+..... ++.
T Consensus 97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHD-s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-Vk~ 174 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHD-SPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-VKI 174 (464)
T ss_pred cceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhc-ccceeEEEccCCCEEEEcCCCceEEecccchhh-hHH
Confidence 4567799999999998 9999999999986543 2344444 455678888889999999999999999986444 444
Q ss_pred eec-CCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC
Q 014590 229 IRM-HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM 299 (422)
Q Consensus 229 ~~~-~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 299 (422)
+.+ |...|++++|+|+ ..|++++.||+|+|||....+.. ..|.+++|+|....+++|+.|..|++||.+++
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg 254 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG 254 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc
Confidence 444 4589999999986 89999999999999999876653 78999999999999999999999999999999
Q ss_pred eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcc
Q 014590 300 KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCC 379 (422)
Q Consensus 300 ~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~ 379 (422)
+++.++.+|+..|..+. |++++++|+++|.|..++++|+++.+.+.++++
T Consensus 255 ~cl~tlh~HKntVl~~~-f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~----------------------------- 304 (464)
T KOG0284|consen 255 SCLATLHGHKNTVLAVK-FNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG----------------------------- 304 (464)
T ss_pred chhhhhhhccceEEEEE-EcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-----------------------------
Confidence 99999999999999999 999999999999999999999998888888755
Q ss_pred cccCCCCCCCCeEEEEe---cCEEEEEEeCCCeEEEEEccC
Q 014590 380 IDRIPKTIRPPITCLAV---GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 380 ~~~~~~~h~~~v~~i~~---~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
|+..|++++| +..+|++|+.||.|..|.+..
T Consensus 305 -------Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~ 338 (464)
T KOG0284|consen 305 -------HKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGL 338 (464)
T ss_pred -------chhhheeeccccccccceeeccCCCceEEEeccc
Confidence 5568999999 579999999999999999874
No 45
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=8.1e-31 Score=241.74 Aligned_cols=279 Identities=17% Similarity=0.298 Sum_probs=202.0
Q ss_pred eeEEee-ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEE-----------ec---CCCe
Q 014590 104 DIDQWK-AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDF-----------DF---DESK 165 (422)
Q Consensus 104 ~~~~l~-~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~-----------~~---~~~~ 165 (422)
..+.+. +|.++|+++.| +|| ||||||.|+.|+||.+...+.. ...... ......+ +. .+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~-~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERM-RVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchh-cccccccchhhhhhhhccccCccccccccccccc
Confidence 345566 89999999999 588 9999999999999998763331 111100 0000000 00 0011
Q ss_pred EE---EecCCeEEEEECCCC---ceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEE
Q 014590 166 IV---GLIGTRICIWRRNGL---RSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTS 238 (422)
Q Consensus 166 l~---~~~~~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 238 (422)
.. +..... .+.+.... ...+....||...++.+++..+. |++++.|.+|++|++...++++.|. |.+.|+|
T Consensus 337 s~~~~~~~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 337 SSSRKGSQSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred cccccccCCcc-ccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 11 111111 11111111 12234445666667888876655 9999999999999999999999987 9999999
Q ss_pred EEecC--CCEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--C
Q 014590 239 LSLSE--DQLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI--S 308 (422)
Q Consensus 239 l~~~~--~~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~ 308 (422)
++|+| |++|++|+-||.|+||++...+.+ .-|++++|.|||++.++|+.+|.+++|++...+....... |
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 99997 389999999999999999888777 8899999999999999999999999999997766544322 1
Q ss_pred ------CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 309 ------PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 309 ------~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
...|+++.|+..+...+++.+.|..|+|+|.+..+++..|++..+.
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~---------------------------- 546 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT---------------------------- 546 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccC----------------------------
Confidence 2379999955444456888889999999999888888888875541
Q ss_pred CCCCCCCCeE-EEEecCEEEEEEeCCCeEEEEEccCC
Q 014590 383 IPKTIRPPIT-CLAVGMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 383 ~~~~h~~~v~-~i~~~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+ ..+. ++.-||++|++|++|..|.+|+.+..
T Consensus 547 ----~-SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 547 ----S-SQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred ----C-cceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 1 1122 23338999999999999999998543
No 46
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.98 E-value=1e-29 Score=230.84 Aligned_cols=315 Identities=17% Similarity=0.193 Sum_probs=245.5
Q ss_pred eeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...-++.||..+|+++.|+ .| .|+|||.|+.|.+||+-...-+..+.+|..... .-|..+.+.++ .+.|+.|++||
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~Wd 177 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWD 177 (888)
T ss_pred ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEe
Confidence 5667899999999999994 55 999999999999999988778888988765544 55666667777 89999999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC----------------c--------ceeee------
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS----------------R--------KCSQI------ 228 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~----------------~--------~~~~~------ 228 (422)
+++..+. ..+-++...+.++...++.+++++.|+.+++|++.. | +.+..
T Consensus 178 L~tqhCf-~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~ 256 (888)
T KOG0306|consen 178 LETQHCF-ETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSD 256 (888)
T ss_pred cccceee-eEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcc
Confidence 9987643 444444444566666667789999999999998810 0 00000
Q ss_pred --------------------------------------------------------------------------------
Q 014590 229 -------------------------------------------------------------------------------- 228 (422)
Q Consensus 229 -------------------------------------------------------------------------------- 228 (422)
T Consensus 257 r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~ 336 (888)
T KOG0306|consen 257 RFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTEN 336 (888)
T ss_pred cEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcce
Confidence
Q ss_pred --------------------------------eecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-----cceE
Q 014590 229 --------------------------------IRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-----TGIK 271 (422)
Q Consensus 229 --------------------------------~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~v~ 271 (422)
+.+|...|.+++++.++.++..+..+.+++|+..+.+++ ..+.
T Consensus 337 ~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l 416 (888)
T KOG0306|consen 337 TLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYIL 416 (888)
T ss_pred eEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEE
Confidence 236777889999998876666667789999999999988 7888
Q ss_pred eEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC-----CceEE
Q 014590 272 TLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-----GEVLS 346 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-----~~~~~ 346 (422)
+..|-|.++++++|..+|.+.+||+.+...+.+.+.|.+.|++++ .+||++.+++||.|.+|++||..- |...+
T Consensus 417 ~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~-~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k 495 (888)
T KOG0306|consen 417 ASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSIS-LSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKK 495 (888)
T ss_pred EEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeee-ecCCCCceEEecCCcEEEEEeEEEEeccCcccce
Confidence 999999999999999999999999999999999999999999999 999999999999999999999741 22212
Q ss_pred Eeeec-------CCcccccCCCCCCeEEeeeccc------cCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEE
Q 014590 347 RCVMD-------IGSASSSSNKVSGVIERNEGRR------LSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIR 411 (422)
Q Consensus 347 ~~~~~-------~~~~~~~~~s~d~~i~~~~~~~------~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~ 411 (422)
.+..+ .+.+.+++.|+||.......-+ +....++.-..-+|.-||.|++. |+++++|||.|.+|+
T Consensus 496 ~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVK 575 (888)
T KOG0306|consen 496 VLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVK 575 (888)
T ss_pred eeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceE
Confidence 12222 2345778889988654221111 11223344445789999999887 899999999999999
Q ss_pred EEEccCCC
Q 014590 412 LWKFNYSD 419 (422)
Q Consensus 412 iW~~~~~~ 419 (422)
||-++.|+
T Consensus 576 iWGLdFGD 583 (888)
T KOG0306|consen 576 IWGLDFGD 583 (888)
T ss_pred Eeccccch
Confidence 99988764
No 47
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.8e-30 Score=235.41 Aligned_cols=269 Identities=15% Similarity=0.160 Sum_probs=218.6
Q ss_pred cceeeEEeeccccceeEEEe--cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM--KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~--~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
....++.+-|..+.|..++| ++. +||.++..+.+|+++..+..+. .+.+|.. +.+++...+|..|+ ++.|.+++
T Consensus 312 ~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svi 390 (775)
T KOG0319|consen 312 ELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVI 390 (775)
T ss_pred ccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEE
Confidence 34566778899999999999 444 9999999999999999987776 5666643 33355456777888 99999999
Q ss_pred EEECCCCcee---eecCCCceee--eEEEeeeC-CeEEEecCCCeEEEEeCCCcc-----ee----eeeecCCccEEEEE
Q 014590 176 IWRRNGLRSV---FPSREGTFMK--GLCMRYFD-PEAVVGCEDGTARVFDMYSRK-----CS----QIIRMHCAPVTSLS 240 (422)
Q Consensus 176 ~w~~~~~~~~---~~~~~~~~~~--~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~-----~~----~~~~~~~~~v~~l~ 240 (422)
+|.++.+... .....+|... .++++..+ +.++++|.|+++++|++...+ .. .+...|...|++++
T Consensus 391 lWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Va 470 (775)
T KOG0319|consen 391 LWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVA 470 (775)
T ss_pred EEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceE
Confidence 9998554422 2233333333 33333333 349999999999999987522 11 13357999999999
Q ss_pred ecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce
Q 014590 241 LSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV 312 (422)
Q Consensus 241 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v 312 (422)
++|+ .++++||.|++.++|+++..... ..|.++.|+|..+.+++++.|++|+||.+.+..++.++.||...|
T Consensus 471 ia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV 550 (775)
T KOG0319|consen 471 IAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV 550 (775)
T ss_pred ecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee
Confidence 9987 89999999999999999976665 889999999999999999999999999999999999999999999
Q ss_pred eeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEEeeec
Q 014590 313 YSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIERNEG 371 (422)
Q Consensus 313 ~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~~~~~ 371 (422)
..+. |-.+++.|++++.||.+++|++++++|+.++..|.+.+ .+++|+.||.+..|..
T Consensus 551 lra~-F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 551 LRAS-FIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred Eeee-eeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeec
Confidence 9999 77889999999999999999999999999999998866 4577888888876644
No 48
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=6.7e-30 Score=201.73 Aligned_cols=235 Identities=16% Similarity=0.201 Sum_probs=196.2
Q ss_pred EeeeCC-CceeeEEEecCCCeEE-EecCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC
Q 014590 146 EEYSLP-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS 222 (422)
Q Consensus 146 ~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 222 (422)
..+..+ ..+..+.|+-||++.+ ++.|.+|++|+...+..+ .....++.+...+...++..+++|+.|+.|.+||+++
T Consensus 11 ~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T 90 (307)
T KOG0316|consen 11 SILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT 90 (307)
T ss_pred eeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEccc
Confidence 344444 3456699999999988 899999999999887644 2334455555666777777899999999999999999
Q ss_pred cceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEE
Q 014590 223 RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYAS 292 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~ 292 (422)
|+.++.+++|.+.|+.+.|+.+ ..+++|+.|.++++||.++.... ..|.++.. .+..+++|+.||+++
T Consensus 91 Gkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v--~~heIvaGS~DGtvR 168 (307)
T KOG0316|consen 91 GKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV--AEHEIVAGSVDGTVR 168 (307)
T ss_pred CeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe--cccEEEeeccCCcEE
Confidence 9999999999999999999976 89999999999999999876543 77888877 567899999999999
Q ss_pred EEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeecc
Q 014590 293 CWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGR 372 (422)
Q Consensus 293 iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~ 372 (422)
.||++.|+....+-+| +|+++. |+++++..+.++-|+++++.|-.+|+.++.+++|.+.-
T Consensus 169 tydiR~G~l~sDy~g~--pit~vs-~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e----------------- 228 (307)
T KOG0316|consen 169 TYDIRKGTLSSDYFGH--PITSVS-FSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME----------------- 228 (307)
T ss_pred EEEeecceeehhhcCC--cceeEE-ecCCCCEEEEeeccceeeecccchhHHHHHhcccccce-----------------
Confidence 9999999988777665 599999 99999999999999999999999999999998877611
Q ss_pred ccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 373 RLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+ ...+ ....+++||+||.|.+||+..+.
T Consensus 229 ----------------ykl-dc~l~qsdthV~sgSEDG~Vy~wdLvd~~ 260 (307)
T KOG0316|consen 229 ----------------YKL-DCCLNQSDTHVFSGSEDGKVYFWDLVDET 260 (307)
T ss_pred ----------------eee-eeeecccceeEEeccCCceEEEEEeccce
Confidence 112 2223 46789999999999999986543
No 49
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-29 Score=203.65 Aligned_cols=285 Identities=19% Similarity=0.241 Sum_probs=230.9
Q ss_pred EeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 107 QWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
.|+||..+++.+.++ +| +|+|++.|.+..||-..+|+.+.++.+|.+.. +++.+.+.+.++ ++.|.++++||++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 478999999999994 66 99999999999999999999999999987654 589999999999 999999999999999
Q ss_pred ceeeecCCCceeeeEEEeeeCCeEEEecC-----CCeEEEEeCC-------CcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCE-----DGTARVFDMY-------SRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~iwd~~-------~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
+++.....+..+..+.+.+.++.++.... .+.|.++|++ ..++...+..+...++.+.|.|- +.+++
T Consensus 85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~ 164 (327)
T KOG0643|consen 85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIA 164 (327)
T ss_pred cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEE
Confidence 99988888888888888888887555543 4789999987 44567777888899999999974 89999
Q ss_pred EcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC
Q 014590 250 GSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
|..||.|..||+++|+.. ..|+.++++||..++++|+.|.+-++||..+.+.+.++.. ..+|++.+ ++|.
T Consensus 165 Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-e~PvN~aa-isP~ 242 (327)
T KOG0643|consen 165 GHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-ERPVNTAA-ISPL 242 (327)
T ss_pred ecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee-ccccccee-cccc
Confidence 999999999999998765 8899999999999999999999999999999999988875 46899999 8898
Q ss_pred CCEEEEEecCCeEEE--EECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--c
Q 014590 322 TSTLVVGGIDGVLRV--LDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--G 397 (422)
Q Consensus 322 ~~~l~s~~~dg~v~v--wd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~ 397 (422)
..+++.|+.....-| =+.+.|+-...|. .+...+++.. .++|-++|++++| +
T Consensus 243 ~d~VilgGGqeA~dVTTT~~r~GKFEArFy-----------------------h~i~eEEigr-vkGHFGPINsvAfhPd 298 (327)
T KOG0643|consen 243 LDHVILGGGQEAMDVTTTSTRAGKFEARFY-----------------------HLIFEEEIGR-VKGHFGPINSVAFHPD 298 (327)
T ss_pred cceEEecCCceeeeeeeecccccchhhhHH-----------------------HHHHHHHhcc-ccccccCcceeEECCC
Confidence 877777654322211 1122222222211 0000111111 2678999999999 7
Q ss_pred CEEEEEEeCCCeEEEEEccC
Q 014590 398 MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 398 ~~~l~s~s~Dg~i~iW~~~~ 417 (422)
|+..+||++||.|++.-++.
T Consensus 299 GksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 299 GKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred CcccccCCCCceEEEEEecc
Confidence 99999999999999987654
No 50
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.8e-29 Score=233.07 Aligned_cols=252 Identities=18% Similarity=0.275 Sum_probs=212.9
Q ss_pred EeeccccceeEEEecC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 107 QWKAHSVGVDQCRMKR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
.|+..+..|..++|++ . .++++--.|.|++||..-+.++..|..|++. .-++|+|+...++ |+.|-.|++|+.++.
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r 83 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR 83 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence 3455677889999954 4 9999999999999999999999999988765 4599999999999 888999999999998
Q ss_pred ceeee--cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEE
Q 014590 183 RSVFP--SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAIS 259 (422)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iw 259 (422)
++++. +|.+ .+..+.+...-|.++++|.|.+|+||+.++++++..+.+|...|.|..|+|. ..++++|-|.+|++|
T Consensus 84 rclftL~GHlD-YVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW 162 (1202)
T KOG0292|consen 84 RCLFTLLGHLD-YVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW 162 (1202)
T ss_pred eehhhhccccc-eeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence 87643 3333 3345556666677999999999999999999999999999999999999995 899999999999999
Q ss_pred eCCCCccc------------------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe--e
Q 014590 260 GLSSDQRL------------------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK--S 301 (422)
Q Consensus 260 d~~~~~~~------------------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~ 301 (422)
|+..-+.. ..|+-++|+|.-..+++|+.|..|++|.+...+ .
T Consensus 163 DisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWE 242 (1202)
T KOG0292|consen 163 DISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 242 (1202)
T ss_pred eecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccccee
Confidence 98632211 678899999999999999999999999987433 3
Q ss_pred eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCC
Q 014590 302 LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSN 360 (422)
Q Consensus 302 ~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 360 (422)
+-+.++|.+.|.++- |+|...++++.|+|++|+|||+...+.++++....+...+++.
T Consensus 243 vDtcrgH~nnVssvl-fhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laa 300 (1202)
T KOG0292|consen 243 VDTCRGHYNNVSSVL-FHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAA 300 (1202)
T ss_pred ehhhhcccCCcceEE-ecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEe
Confidence 556789999999998 9999999999999999999999988888888765554433333
No 51
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=8.9e-28 Score=198.05 Aligned_cols=277 Identities=16% Similarity=0.234 Sum_probs=225.7
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-Eec--CCeEEEE
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLI--GTRICIW 177 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~--~~~i~~w 177 (422)
..+.|..-.+.|.++.|+ +| +|++++.|.+++|||..+++.++++..+. ++..+.|......++ ++. |.+|+..
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryL 85 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYL 85 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEE
Confidence 344566678899999994 56 99999999999999999999999998764 456688888777766 555 7899999
Q ss_pred ECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCC-EEEEEcCCC
Q 014590 178 RRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQ-LIISGSSLG 254 (422)
Q Consensus 178 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~l~s~~~dg 254 (422)
++.+.+.+ +.+|... +..+++++.++.+++++.|++|++||++..++...+.....+ ..+|+|.+ ++|++....
T Consensus 86 sl~dNkylRYF~GH~~~-V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~ 162 (311)
T KOG1446|consen 86 SLHDNKYLRYFPGHKKR-VNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSE 162 (311)
T ss_pred EeecCceEEEcCCCCce-EEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCC
Confidence 99998855 5555554 457888888888999999999999999988887777544333 57788875 556666556
Q ss_pred cEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCc--eeeeeeEec
Q 014590 255 SIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNV--VYSLQHLQN 320 (422)
Q Consensus 255 ~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~l~~~s~ 320 (422)
.|++||++.-..- ...+.+.|+|||++|+.++..+.+++.|.-+|..+.++..+... +.--++|+|
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftP 242 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTP 242 (311)
T ss_pred eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECC
Confidence 9999999875321 67889999999999999999999999999999998888877532 333334999
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEE
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKK 400 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 400 (422)
|++++++|+.||+|.+|++++|..+..+.+. +.+++.++.|++++
T Consensus 243 ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~-----------------------------------~~~~~~~~~fnP~~ 287 (311)
T KOG1446|consen 243 DSKFVLSGSDDGTIHVWNLETGKKVAVLRGP-----------------------------------NGGPVSCVRFNPRY 287 (311)
T ss_pred CCcEEEEecCCCcEEEEEcCCCcEeeEecCC-----------------------------------CCCCccccccCCce
Confidence 9999999999999999999999999888663 34688999999998
Q ss_pred EEEEeCCCeEEEEEccCC
Q 014590 401 VVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 401 l~s~s~Dg~i~iW~~~~~ 418 (422)
..-++.+..+.+|=.+..
T Consensus 288 ~mf~sa~s~l~fw~p~~~ 305 (311)
T KOG1446|consen 288 AMFVSASSNLVFWLPDED 305 (311)
T ss_pred eeeeecCceEEEEecccc
Confidence 888888999999977643
No 52
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=4.7e-29 Score=233.45 Aligned_cols=234 Identities=21% Similarity=0.320 Sum_probs=199.4
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCc--eeee-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeC-CCccee
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR--SVFP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM-YSRKCS 226 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~-~~~~~~ 226 (422)
..+.++.|+++|+.++ ++.++.+++|+..+.. .... ......+..+++.+++..+++++.|++|++||+ ..+..+
T Consensus 160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~ 239 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNL 239 (456)
T ss_pred CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEE
Confidence 4566799999999998 8899999999996655 2211 223445567888888889999999999999999 556899
Q ss_pred eeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 227 QIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
+++++|...|++++|+|. +++++|+.|++|++||+++++.. ..|++++|++++++|++++.|+.|++||+.+
T Consensus 240 ~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 240 KTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred EEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 999999999999999987 79999999999999999998877 8999999999999999999999999999999
Q ss_pred Ce--eeeeeccCCCc--eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeecccc
Q 014590 299 MK--SLWETRISPNV--VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRL 374 (422)
Q Consensus 299 ~~--~~~~~~~~~~~--v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~ 374 (422)
+. +...+..+... ++++. |+|++.++++++.|+.+++||+..+.+...+..|....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~------------------- 379 (456)
T KOG0266|consen 320 GSKLCLKLLSGAENSAPVTSVQ-FSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLV------------------- 379 (456)
T ss_pred CceeeeecccCCCCCCceeEEE-ECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcc-------------------
Confidence 98 56777777655 88998 99999999999999999999999999999998876610
Q ss_pred CCCcccccCCCCCCCCeEEEE-e-cCEEEEEEeCCCeEEEEEccCCC
Q 014590 375 SAGCCIDRIPKTIRPPITCLA-V-GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 375 ~~~~~~~~~~~~h~~~v~~i~-~-~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+.+.. + ++.++++|+.|+.|.+|++.+++
T Consensus 380 --------------~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~ 412 (456)
T KOG0266|consen 380 --------------RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGG 412 (456)
T ss_pred --------------eeEecccccCCCCeEEEEeCCceEEEEeCCccc
Confidence 1222222 2 68999999999999999998754
No 53
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=3.5e-29 Score=209.58 Aligned_cols=236 Identities=15% Similarity=0.156 Sum_probs=196.2
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+..+.++.||.+.|+|+.| .+| +||||+.+|.|+||+..++.....+.. -+...-+.|+|-+..|+ |+.||.+.+|
T Consensus 96 ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw 175 (399)
T KOG0296|consen 96 GEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMW 175 (399)
T ss_pred CcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEE
Confidence 3467889999999999999 477 999999999999999999988888864 34456699999998887 9999999999
Q ss_pred ECCCCc--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee-------------------------
Q 014590 178 RRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR------------------------- 230 (422)
Q Consensus 178 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------------------------- 230 (422)
.+..+. +++.++... ...=.+.++++.++++..||+|++||+.+++++..+.
T Consensus 176 ~ip~~~~~kv~~Gh~~~-ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e 254 (399)
T KOG0296|consen 176 QIPSQALCKVMSGHNSP-CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSE 254 (399)
T ss_pred ECCCcceeeEecCCCCC-cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCC
Confidence 998843 345554433 3345677788999999999999999999998776543
Q ss_pred --------------------------cCCccEEEEEecC---C-CEEEEEcCCCcEEEEeCCCCccc------cceEeEE
Q 014590 231 --------------------------MHCAPVTSLSLSE---D-QLIISGSSLGSIAISGLSSDQRL------TGIKTLC 274 (422)
Q Consensus 231 --------------------------~~~~~v~~l~~~~---~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~ 274 (422)
.+...+.++.+.| . .+.++|+.||+|.+||+...... .+|..+.
T Consensus 255 ~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~ 334 (399)
T KOG0296|consen 255 GVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLK 334 (399)
T ss_pred ccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEE
Confidence 1111223333333 2 57888999999999999876655 8899999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
|-+ ..+|++++.+|.|+.||.++|+++.++.+|...|.+++ ++|+.++++++|.|++.+||++.
T Consensus 335 w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~-ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 335 WLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFA-LSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEE-EcCCCcEEEEecCCCeEEEEecC
Confidence 988 68999999999999999999999999999999999999 99999999999999999999875
No 54
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=3.3e-29 Score=233.71 Aligned_cols=241 Identities=20% Similarity=0.283 Sum_probs=204.1
Q ss_pred eeeEE-eeccccceeEEEec--CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQ-WKAHSVGVDQCRMK--RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~-l~~H~~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
..+.. +.||.+.|++++++ ++++++|+.|.++++||..+|++...+.+|. ..+.++...+..++ |+.|.+|++|+
T Consensus 239 ~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~-stv~~~~~~~~~~~sgs~D~tVkVW~ 317 (537)
T KOG0274|consen 239 YLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHT-SSVRCLTIDPFLLVSGSRDNTVKVWD 317 (537)
T ss_pred eEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCC-ceEEEEEccCceEeeccCCceEEEEe
Confidence 44555 99999999999997 5599999999999999999999999999774 34455566666666 79999999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAI 258 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~i 258 (422)
++++..+.... ++...+.++...++.+++|+.|++|++||+.++++++++.+|...|.++.+.+.+.+++|+.|++|++
T Consensus 318 v~n~~~l~l~~-~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~Ikv 396 (537)
T KOG0274|consen 318 VTNGACLNLLR-GHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKV 396 (537)
T ss_pred ccCcceEEEec-cccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEe
Confidence 99887542222 14445677777899999999999999999999999999999999999998865589999999999999
Q ss_pred EeCCCC-ccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-CCCceeeeeeEecCCCEEEEEe
Q 014590 259 SGLSSD-QRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-SPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 259 wd~~~~-~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
||++++ +++ ..+..+. ..++++++++.|++|++||..+++++.++.+ |...|.+++ +. ...+++++
T Consensus 397 Wdl~~~~~c~~tl~~h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~-~~--~~~il~s~ 471 (537)
T KOG0274|consen 397 WDLRTKRKCIHTLQGHTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALA-LG--KEEILCSS 471 (537)
T ss_pred ecCCchhhhhhhhcCCcccccccc--cccceeEeccccccEEEeecccCceeeeeccCCcccEEEee-cC--cceEEEEe
Confidence 999999 666 4444444 4778999999999999999999999999998 668888887 43 46789999
Q ss_pred cCCeEEEEECCCCceEEEeee
Q 014590 330 IDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 330 ~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.||.+++||+++++..+.+..
T Consensus 472 ~~~~~~l~dl~~~~~~~~l~~ 492 (537)
T KOG0274|consen 472 DDGSVKLWDLRSGTLIRTLLS 492 (537)
T ss_pred cCCeeEEEecccCchhhhhhh
Confidence 999999999999998887733
No 55
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-29 Score=201.12 Aligned_cols=242 Identities=17% Similarity=0.271 Sum_probs=199.6
Q ss_pred hccc-cceeeEEeeccccceeEEEecC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecC--
Q 014590 97 ALEE-GRIDIDQWKAHSVGVDQCRMKR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIG-- 171 (422)
Q Consensus 97 ~~~~-~~~~~~~l~~H~~~v~~v~~~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-- 171 (422)
-|.. .++++-++.||+++|+|+..+. . +++||+.|.++++||+++|+++..++.+..+..+.|+++|+.++.+.|
T Consensus 36 vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~ 115 (327)
T KOG0643|consen 36 VWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQ 115 (327)
T ss_pred EEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhh
Confidence 3444 7889999999999999999953 3 999999999999999999999999999999999999999999885444
Q ss_pred ----CeEEEEECCCC-------cee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-eeeeeecCCccEE
Q 014590 172 ----TRICIWRRNGL-------RSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-CSQIIRMHCAPVT 237 (422)
Q Consensus 172 ----~~i~~w~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~ 237 (422)
+.|.++|+... .+. ...+. ......-|.+.+..|++|..||.|.+||+++|+ .+..-+.|...|+
T Consensus 116 mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~-skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~In 194 (327)
T KOG0643|consen 116 MGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD-SKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKIN 194 (327)
T ss_pred cCcceEEEEEEccCChhhhcccCceEEecCCc-cceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccc
Confidence 57999998732 222 22223 334466777888889999999999999999984 5666688999999
Q ss_pred EEEecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEE--EECCCC---------
Q 014590 238 SLSLSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASC--WDLRTM--------- 299 (422)
Q Consensus 238 ~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~i--wd~~~~--------- 299 (422)
.+.++++ .++++++.|.+-++||.++.+.+ .+|++.+++|....++.|+.....-+ =+.+.|
T Consensus 195 d~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~ 274 (327)
T KOG0643|consen 195 DLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL 274 (327)
T ss_pred cccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHH
Confidence 9999988 89999999999999999998877 89999999998888777764322222 122222
Q ss_pred ---eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 300 ---KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 300 ---~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+.+..+++|-++|++++ |+|+|+..++|++||.|++.-+.
T Consensus 275 i~eEEigrvkGHFGPINsvA-fhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 275 IFEEEIGRVKGHFGPINSVA-FHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred HHHHHhccccccccCcceeE-ECCCCcccccCCCCceEEEEEec
Confidence 45677899999999999 99999999999999999998654
No 56
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=5e-30 Score=211.56 Aligned_cols=267 Identities=16% Similarity=0.227 Sum_probs=219.2
Q ss_pred ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeC---------CCceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL---------PNAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
|...-+.|..| ||| ||++|+.||-|.+||..+|+..+.++- ...+.++.|+.|...++ |+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 44566788888 677 999999999999999999987765542 34567799999999999 9999999999
Q ss_pred ECCCCceeeecCCCcee--eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 178 RRNGLRSVFPSREGTFM--KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
.+.++.++......|.. .++.++.++..+++++.|.++++.-+.+|++++.+++|+..|+...|.++ +.+++++.||
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 99999977544444433 34445556666999999999999999999999999999999999999976 8999999999
Q ss_pred cEEEEeCCCCccc---------cceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeeeccCC---CceeeeeeEecC
Q 014590 255 SIAISGLSSDQRL---------TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWETRISP---NVVYSLQHLQND 321 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~l~~~s~~ 321 (422)
+|++|+..+.+++ .+|.++-.-|. ...++++...++|++.++. |+.++.+.... +...+.. .+|.
T Consensus 371 tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~-lSpk 448 (508)
T KOG0275|consen 371 TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAI-LSPK 448 (508)
T ss_pred cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEE-ecCC
Confidence 9999999998887 66777776664 4678888889999999987 78887775432 3333344 8999
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCE
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMK 399 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~ 399 (422)
|.++.+.++|+.++.|.+.+|+...++..|.. .|..++- +.+
T Consensus 449 GewiYcigED~vlYCF~~~sG~LE~tl~VhEk------------------------------------dvIGl~HHPHqN 492 (508)
T KOG0275|consen 449 GEWIYCIGEDGVLYCFSVLSGKLERTLPVHEK------------------------------------DVIGLTHHPHQN 492 (508)
T ss_pred CcEEEEEccCcEEEEEEeecCceeeeeecccc------------------------------------cccccccCcccc
Confidence 99999999999999999999999999877544 4444444 356
Q ss_pred EEEEEeCCCeEEEEE
Q 014590 400 KVVTTHNSKYIRLWK 414 (422)
Q Consensus 400 ~l~s~s~Dg~i~iW~ 414 (422)
.|+|-++||.+++|.
T Consensus 493 llAsYsEDgllKLWk 507 (508)
T KOG0275|consen 493 LLASYSEDGLLKLWK 507 (508)
T ss_pred hhhhhcccchhhhcC
Confidence 799999999999996
No 57
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=2.3e-30 Score=219.85 Aligned_cols=272 Identities=17% Similarity=0.268 Sum_probs=221.7
Q ss_pred eEEeeccccceeEEEe-cC-CeEEEEecCCeEEEEEcCCCe--EEEeeeCC-CceeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KR-GLILTGVGDKVMRLWSLEGYK--CVEEYSLP-NAASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~-~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...+..|.+.|..+.| ++ +.|++|+.|..|++|+...++ .+.++.+. ..+..+.|.+++.+++ ++.|+.+++|+
T Consensus 168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wn 247 (459)
T KOG0288|consen 168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWN 247 (459)
T ss_pred hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeee
Confidence 3567889999999999 44 499999999999999987665 55566554 4456799999999987 89999999999
Q ss_pred CCCCce--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcE
Q 014590 179 RNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSI 256 (422)
Q Consensus 179 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i 256 (422)
++..+. .+.+|.+.+. ...+..+...+++|+.|.+|++||+....+.+++. ....+..++.. ...+++|..|+.|
T Consensus 248 vd~~r~~~TLsGHtdkVt-~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~-~~~~~SgH~Dkkv 324 (459)
T KOG0288|consen 248 VDSLRLRHTLSGHTDKVT-AAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS-ISDVISGHFDKKV 324 (459)
T ss_pred ccchhhhhhhccccccee-eehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec-ceeeeecccccce
Confidence 998763 3555555432 22223333449999999999999999988887764 34556667664 5678999999999
Q ss_pred EEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC----CceeeeeeEecCCCEEE
Q 014590 257 AISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP----NVVYSLQHLQNDTSTLV 326 (422)
Q Consensus 257 ~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----~~v~~l~~~s~~~~~l~ 326 (422)
++||.++.... +.|+++..+++|..+.+.+.|.++.+.|+++.+....+.... ...+.+. |||++.|++
T Consensus 325 RfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvv-fSpd~~Yva 403 (459)
T KOG0288|consen 325 RFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVV-FSPDGSYVA 403 (459)
T ss_pred EEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeE-ECCCCceee
Confidence 99999988776 899999999999999999999999999999988777665422 2366676 999999999
Q ss_pred EEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEEEEEE
Q 014590 327 VGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTT 404 (422)
Q Consensus 327 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~ 404 (422)
+||.||.|+||++.++++...+..... ...|++++|+ |..|+++
T Consensus 404 AGS~dgsv~iW~v~tgKlE~~l~~s~s----------------------------------~~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 404 AGSADGSVYIWSVFTGKLEKVLSLSTS----------------------------------NAAITSLSWNPSGSGLLSA 449 (459)
T ss_pred eccCCCcEEEEEccCceEEEEeccCCC----------------------------------CcceEEEEEcCCCchhhcc
Confidence 999999999999999999888865333 2379999994 8999999
Q ss_pred eCCCeEEEEE
Q 014590 405 HNSKYIRLWK 414 (422)
Q Consensus 405 s~Dg~i~iW~ 414 (422)
+.++.+.+|.
T Consensus 450 dk~~~v~lW~ 459 (459)
T KOG0288|consen 450 DKQKAVTLWT 459 (459)
T ss_pred cCCcceEecC
Confidence 9999999994
No 58
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.1e-29 Score=200.15 Aligned_cols=245 Identities=13% Similarity=0.164 Sum_probs=195.6
Q ss_pred CCeEEEEEcCCCe---EEEeeeCCCceeeEEEecCCCeE--EEecCCeEEEEECCCCcee---eecCCCceeeeEEEeee
Q 014590 131 DKVMRLWSLEGYK---CVEEYSLPNAASLVDFDFDESKI--VGLIGTRICIWRRNGLRSV---FPSREGTFMKGLCMRYF 202 (422)
Q Consensus 131 dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~w~~~~~~~~---~~~~~~~~~~~~~~~~~ 202 (422)
.|.+.|-++..++ ....+.......-++|++..... +++.||++++||+...... ++.|..+ +.++...
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~E---V~Svdwn 113 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKRE---VYSVDWN 113 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhh---eEEeccc
Confidence 6889999986443 44555556666779999865443 3999999999997655433 4444444 3444433
Q ss_pred --C-CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCc-cc------cce
Q 014590 203 --D-PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQ-RL------TGI 270 (422)
Q Consensus 203 --~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~-~~------~~v 270 (422)
. ..++++|.|++|++|+...++.+.++.+|...|...+|+|. +.++++|.|+++++||++..- .+ ..|
T Consensus 114 ~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Ei 193 (311)
T KOG0277|consen 114 TVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEI 193 (311)
T ss_pred cccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecccee
Confidence 2 23888899999999999999999999999999999999985 899999999999999997643 22 689
Q ss_pred EeEEEec-CCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCC-EEEEEecCCeEEEEECCCCce-EE
Q 014590 271 KTLCYNP-CSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTGEV-LS 346 (422)
Q Consensus 271 ~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~-~~ 346 (422)
.++.|+. +.+.+++|+.|+.|+.||+++. .++.++.+|.-.|..++ |||... .|++++.|-+++|||...+.. +.
T Consensus 194 l~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk-~Sph~~~lLaSasYDmT~riw~~~~~ds~~e 272 (311)
T KOG0277|consen 194 LCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVK-FSPHHASLLASASYDMTVRIWDPERQDSAIE 272 (311)
T ss_pred EeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEe-cCcchhhHhhhccccceEEecccccchhhhh
Confidence 9999986 5678999999999999999974 57889999999999999 888754 899999999999999874432 33
Q ss_pred EeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe---cCEEEEEEeCCCeEEEEEc
Q 014590 347 RCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 347 ~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~~~~l~s~s~Dg~i~iW~~ 415 (422)
+. ..|+..|..++| ++.++++++-|+.+.||+.
T Consensus 273 ~~------------------------------------~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 273 TV------------------------------------DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hh------------------------------------hccceEEeccccccccCceeeecccccceeeecc
Confidence 33 235667888888 5899999999999999985
No 59
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.2e-28 Score=202.69 Aligned_cols=238 Identities=15% Similarity=0.232 Sum_probs=197.1
Q ss_pred eeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 104 DIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
++..+..|.++|++++.+.-++||||.|-+|+|||+.+...+..+..|.+ +.++.|.+.-.
T Consensus 35 ~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S------------------ 96 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLS------------------ 96 (362)
T ss_pred ccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcc------------------
Confidence 46778999999999999988999999999999999998888877766643 23344443211
Q ss_pred ceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeC
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~ 261 (422)
...|++|+.||.|.+|+....+++.++++|.+.|+.++++|. .+.++.+.|+.+++||+
T Consensus 97 --------------------~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 97 --------------------KSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred --------------------hhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehh
Confidence 113899999999999999999999999999999999999997 78888899999999999
Q ss_pred CCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEE
Q 014590 262 SSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLR 335 (422)
Q Consensus 262 ~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~ 335 (422)
-.|+.. ...+.+.|+|.|.+++.+..++ |-+|.+.+-....++... ..+.++. | -++..|++|+.|+.|.
T Consensus 157 V~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~-~r~l~~~-~-l~~~~L~vG~d~~~i~ 232 (362)
T KOG0294|consen 157 VRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP-KRILCAT-F-LDGSELLVGGDNEWIS 232 (362)
T ss_pred hcCccceeeccCCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc-ccceeee-e-cCCceEEEecCCceEE
Confidence 888765 5566699999999999998776 999999877666655443 4466666 4 4677899999999999
Q ss_pred EEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe----cCEEEEEEeCCCeEE
Q 014590 336 VLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV----GMKKVVTTHNSKYIR 411 (422)
Q Consensus 336 vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~----~~~~l~s~s~Dg~i~ 411 (422)
+||..++.+...+.+| ...|-++.+ ++.+|+|+|.||.|+
T Consensus 233 ~~D~ds~~~~~~~~AH------------------------------------~~RVK~i~~~~~~~~~~lvTaSSDG~I~ 276 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLAH------------------------------------ENRVKDIASYTNPEHEYLVTASSDGFIK 276 (362)
T ss_pred EeccCCCccceeeecc------------------------------------hhheeeeEEEecCCceEEEEeccCceEE
Confidence 9999988888887664 458888886 368999999999999
Q ss_pred EEEccCCC
Q 014590 412 LWKFNYSD 419 (422)
Q Consensus 412 iW~~~~~~ 419 (422)
|||++...
T Consensus 277 vWd~~~~~ 284 (362)
T KOG0294|consen 277 VWDIDMET 284 (362)
T ss_pred EEEccccc
Confidence 99998763
No 60
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=8.5e-30 Score=220.60 Aligned_cols=239 Identities=18% Similarity=0.281 Sum_probs=200.9
Q ss_pred ccccceeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCC-CeEE-EecCCe
Q 014590 98 LEEGRIDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE-SKIV-GLIGTR 173 (422)
Q Consensus 98 ~~~~~~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~~~~~ 173 (422)
+...+.+++++.||..+|.+++|+ +| .++|+|.|+.+++||+++|+++..+.......++.|.||+ +.++ |..|+.
T Consensus 244 vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~k 323 (503)
T KOG0282|consen 244 VYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKK 323 (503)
T ss_pred EecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCc
Confidence 344567889999999999999995 66 9999999999999999999999999999889999999998 4444 999999
Q ss_pred EEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee-cCCccEEEEEecCC-CEEEE
Q 014590 174 ICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 174 i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~-~~l~s 249 (422)
|+.||+++++.+ +..+-+. +..+.+..++..+++.+.|++++||+.+.+-.++.+. .+.....++..+|+ .+++.
T Consensus 324 i~~wDiRs~kvvqeYd~hLg~-i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a 402 (503)
T KOG0282|consen 324 IRQWDIRSGKVVQEYDRHLGA-ILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA 402 (503)
T ss_pred EEEEeccchHHHHHHHhhhhh-eeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh
Confidence 999999998843 2223333 2345566677789999999999999998876655442 23345668888887 89999
Q ss_pred EcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 250 GSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
-+.|..|.++.+...-.. +.-..+.|||||++|++|+.||.+.+||.++-+.+..++.|...+..+.
T Consensus 403 Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~- 481 (503)
T KOG0282|consen 403 QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVD- 481 (503)
T ss_pred hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEE-
Confidence 999999999987644333 7778899999999999999999999999999999999999999999999
Q ss_pred EecCC-CEEEEEecCCeEEEEE
Q 014590 318 LQNDT-STLVVGGIDGVLRVLD 338 (422)
Q Consensus 318 ~s~~~-~~l~s~~~dg~v~vwd 338 (422)
|+|.. ..+|+++.||.|++||
T Consensus 482 wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 482 WHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ecCCCcceeEecccCceeEecC
Confidence 77765 4899999999999996
No 61
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=6.4e-28 Score=242.31 Aligned_cols=250 Identities=17% Similarity=0.250 Sum_probs=198.5
Q ss_pred CCeEEEEEcCCCeEEEeeeC-----C-CceeeEEEecCCCeEE-EecCCeEEEEECCCCc--------eeeecCCCceee
Q 014590 131 DKVMRLWSLEGYKCVEEYSL-----P-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR--------SVFPSREGTFMK 195 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~--------~~~~~~~~~~~~ 195 (422)
+|.+++|+..+.+....+.. | ..+..++|++++++++ ++.|+.|++|+..... ..........+.
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 536 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLS 536 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCcee
Confidence 67788999887655544432 2 3455699999999998 8999999999975421 111111122233
Q ss_pred eEEEeee-CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCccc-----
Q 014590 196 GLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 196 ~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~----- 267 (422)
.+++.+. +..+++++.||+|++||+.+++.+..+.+|.+.|++++|+| + .+|++|+.|++|++||++++..+
T Consensus 537 ~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~ 616 (793)
T PLN00181 537 GICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 616 (793)
T ss_pred eEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 4555543 45699999999999999999999999999999999999996 4 79999999999999999987765
Q ss_pred -cceEeEEEe-cCCCEEEEEeCCCeEEEEECCCCe-eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC--
Q 014590 268 -TGIKTLCYN-PCSRLVFAGTTAGYASCWDLRTMK-SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG-- 342 (422)
Q Consensus 268 -~~v~~~~~~-~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~-- 342 (422)
..+.++.|+ ++|.++++|+.||.|++||+++.+ ++..+.+|...|.++. |. ++.+|++++.|++|++||+..+
T Consensus 617 ~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~-f~-~~~~lvs~s~D~~ikiWd~~~~~~ 694 (793)
T PLN00181 617 KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVR-FV-DSSTLVSSSTDNTLKLWDLSMSIS 694 (793)
T ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEE-Ee-CCCEEEEEECCCEEEEEeCCCCcc
Confidence 578899995 579999999999999999998765 5677889999999999 75 6789999999999999998743
Q ss_pred ----ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 343 ----EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 343 ----~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+++..+ .+|...+.+++| ++.+|++|+.|+.|++|+..
T Consensus 695 ~~~~~~l~~~------------------------------------~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 695 GINETPLHSF------------------------------------MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred ccCCcceEEE------------------------------------cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 223333 346668888888 58999999999999999975
Q ss_pred CC
Q 014590 417 YS 418 (422)
Q Consensus 417 ~~ 418 (422)
.+
T Consensus 739 ~~ 740 (793)
T PLN00181 739 FP 740 (793)
T ss_pred CC
Confidence 43
No 62
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.97 E-value=3.2e-28 Score=219.44 Aligned_cols=271 Identities=18% Similarity=0.264 Sum_probs=216.1
Q ss_pred eeeEEeeccccceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEE--eeeCCCceee--EEEec-CCCeEE-EecCCeEE
Q 014590 103 IDIDQWKAHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVE--EYSLPNAASL--VDFDF-DESKIV-GLIGTRIC 175 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~--~~~~~-~~~~l~-~~~~~~i~ 175 (422)
..-+.+.||..-|..+++.++ .++++|.||++++|+-..++.+. .+..|.+... +++.+ ++..++ ++.|..|.
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~ 84 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTII 84 (745)
T ss_pred eeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEE
Confidence 456789999999999999665 89999999999999987666554 4555544332 45544 333344 99999999
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCC
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLG 254 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg 254 (422)
+|...+.... ....+|...+++++..... +++||.|.++++|-. +++...+++|+..|++++.-|++.+++|+.|.
T Consensus 85 v~~~~~~~P~-~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDK 161 (745)
T KOG0301|consen 85 VFKLSQAEPL-YTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPENTYVTGSADK 161 (745)
T ss_pred EEecCCCCch-hhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCcchheeeeeecCCCcEEeccCcc
Confidence 9999887754 2333444446677654443 899999999999985 67778899999999999999999999999999
Q ss_pred cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 255 SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 255 ~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
+|++|.-.+-... ..|+.+++-+++ .+++++.||.|++|++ +|+.+.++.+|++-|++++ ..+++..+++++
T Consensus 162 tIklWk~~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis-~~~~~~~Ivs~g 238 (745)
T KOG0301|consen 162 TIKLWKGGTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSIS-MALSDGLIVSTG 238 (745)
T ss_pred eeeeccCCchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEE-ecCCCCeEEEec
Confidence 9999986332222 889999998765 5788899999999999 6899999999999999999 888899999999
Q ss_pred cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCC
Q 014590 330 IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSK 408 (422)
Q Consensus 330 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg 408 (422)
+|++++||+.. ++.+.+.... ..|+++.+ .+.-|++|+.||
T Consensus 239 EDrtlriW~~~--e~~q~I~lPt------------------------------------tsiWsa~~L~NgDIvvg~SDG 280 (745)
T KOG0301|consen 239 EDRTLRIWKKD--ECVQVITLPT------------------------------------TSIWSAKVLLNGDIVVGGSDG 280 (745)
T ss_pred CCceEEEeecC--ceEEEEecCc------------------------------------cceEEEEEeeCCCEEEeccCc
Confidence 99999999975 6766664322 26787777 566689999999
Q ss_pred eEEEEEccC
Q 014590 409 YIRLWKFNY 417 (422)
Q Consensus 409 ~i~iW~~~~ 417 (422)
.|+||..+.
T Consensus 281 ~VrVfT~~k 289 (745)
T KOG0301|consen 281 RVRVFTVDK 289 (745)
T ss_pred eEEEEEecc
Confidence 999998764
No 63
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=4.1e-28 Score=194.50 Aligned_cols=243 Identities=16% Similarity=0.175 Sum_probs=205.2
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee--CCC-ceeeEEEec-CCCeEE-EecCCeEEEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS--LPN-AASLVDFDF-DESKIV-GLIGTRICIWR 178 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~-~~~~~~~~~-~~~~l~-~~~~~~i~~w~ 178 (422)
+.+++|.+.|.+|+| .+| .|++|+.|+++++|+++..+...... +|. .+.-++++| .+..++ ++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 567899999999999 477 99999999999999998876554443 343 344477777 455566 89999999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec-CCCEEEEEcCCCcEE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIA 257 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~ 257 (422)
...++++.........-.+++.+.+.+++++..|..|.+.|.++.+.....+ ....++.++|+ ++++++.....|+|.
T Consensus 94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ 172 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVE 172 (313)
T ss_pred eccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEE
Confidence 9999887666555545578899999999999999999999999888777655 34567788888 457777777789999
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
|......+.+ ....|+.|+|+|+++|+|+.|..+.+||+...-+++.+.-+.-+|..+. |+.+|++||+||+
T Consensus 173 ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlS-FS~dg~~lASaSE 251 (313)
T KOG1407|consen 173 ILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLS-FSHDGRMLASASE 251 (313)
T ss_pred EEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEE-eccCcceeeccCc
Confidence 9988877666 6677889999999999999999999999999989999999999999999 9999999999999
Q ss_pred CCeEEEEECCCCceEEEeee
Q 014590 331 DGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~ 350 (422)
|..|-|=++++|..+..++.
T Consensus 252 Dh~IDIA~vetGd~~~eI~~ 271 (313)
T KOG1407|consen 252 DHFIDIAEVETGDRVWEIPC 271 (313)
T ss_pred cceEEeEecccCCeEEEeec
Confidence 99999999999999988754
No 64
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=7e-29 Score=204.28 Aligned_cols=282 Identities=18% Similarity=0.248 Sum_probs=226.1
Q ss_pred eeeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
..++.|.||.+.|+.++...+ .+.+++.|.+.+||.+++|.|+..|.+|.+ +.++.|++.+..++ ++.|++..||.
T Consensus 139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHH
Confidence 356788999999999998544 999999999999999999999999999854 56799999999988 99999999996
Q ss_pred C----CCCc-----------e------------------------eeecCCCcee--eeEEEeeeCCeEEEecCCCeEEE
Q 014590 179 R----NGLR-----------S------------------------VFPSREGTFM--KGLCMRYFDPEAVVGCEDGTARV 217 (422)
Q Consensus 179 ~----~~~~-----------~------------------------~~~~~~~~~~--~~~~~~~~~~~l~~~~~d~~i~i 217 (422)
. +.++ . .+....+|.. ....|...+..+++++.|.+..+
T Consensus 219 ~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnl 298 (481)
T KOG0300|consen 219 AAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANL 298 (481)
T ss_pred HhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecccccee
Confidence 1 1100 0 0001112211 12223344566999999999999
Q ss_pred EeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCC
Q 014590 218 FDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTA 288 (422)
Q Consensus 218 wd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~d 288 (422)
||+++|+.+..+.+|....+.++-+|. .++++.+.|.+.++||++..-.. ..|+++.|..+ ..+++|+.|
T Consensus 299 wDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDD 377 (481)
T KOG0300|consen 299 WDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDD 377 (481)
T ss_pred eeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC-CceeecCCC
Confidence 999999999999999999999999998 78889999999999999843322 78999999765 468899999
Q ss_pred CeEEEEECCCCe-eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEE
Q 014590 289 GYASCWDLRTMK-SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIE 367 (422)
Q Consensus 289 g~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 367 (422)
.+|++||++++. ++.+++. ..+++-++ .+..+..|+.--.+..|++||+. |..+..++...
T Consensus 378 rTvKvWdLrNMRsplATIRt-dS~~NRva-vs~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrts--------------- 439 (481)
T KOG0300|consen 378 RTVKVWDLRNMRSPLATIRT-DSPANRVA-VSKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRTS--------------- 439 (481)
T ss_pred ceEEEeeeccccCcceeeec-CCccceeE-eecCCceEEeccCCceEEEEecC-CCccccCCccc---------------
Confidence 999999999864 5566654 46788888 88888899999999999999986 66666665432
Q ss_pred eeeccccCCCcccccCCCCCCCCeEEEEe-c---CEEEEEEeCCCeEEEEEccCCC
Q 014590 368 RNEGRRLSAGCCIDRIPKTIRPPITCLAV-G---MKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~---~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+|...|+|++| + -.-|+|+|.|..+.-|++..+.
T Consensus 440 ----------------RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 440 ----------------RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ----------------ccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 2679999999999 2 2568999999999999998764
No 65
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=6.2e-29 Score=211.17 Aligned_cols=236 Identities=17% Similarity=0.208 Sum_probs=201.2
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCC--CceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
...+++.||..+|..+.| ||+ +|++++.|..+.+||+.+|.+...+... ..+.+.+|.|||..++ |+.|+++..|
T Consensus 260 kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~w 339 (519)
T KOG0293|consen 260 KLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMW 339 (519)
T ss_pred eeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEe
Confidence 457899999999999999 555 9999999999999999999999988876 4567799999999998 9999999999
Q ss_pred ECCCCc-eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 178 RRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 178 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
|+++.. ..++....+.+..+++.++++.+++...|..|++++.++......+.. ..+|++++++.+ .++++.-.+..
T Consensus 340 dlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise-~~~its~~iS~d~k~~LvnL~~qe 418 (519)
T KOG0293|consen 340 DLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISE-EQPITSFSISKDGKLALVNLQDQE 418 (519)
T ss_pred cCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccc-cCceeEEEEcCCCcEEEEEcccCe
Confidence 999876 345666667778889999999999889999999999987766655443 468999999976 78888889999
Q ss_pred EEEEeCCCCccc---------cceEeEEEe-cCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-E
Q 014590 256 IAISGLSSDQRL---------TGIKTLCYN-PCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-T 324 (422)
Q Consensus 256 i~iwd~~~~~~~---------~~v~~~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~ 324 (422)
+++||++....+ ..+..-+|. .+..++++|++|+.|+||+..+++++.++.||...|++++ ++|... .
T Consensus 419 i~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVs-wNP~~p~m 497 (519)
T KOG0293|consen 419 IHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVS-WNPADPEM 497 (519)
T ss_pred eEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEe-cCCCCHHH
Confidence 999999966655 334444554 3558999999999999999999999999999999999999 877654 7
Q ss_pred EEEEecCCeEEEEECC
Q 014590 325 LVVGGIDGVLRVLDQN 340 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~ 340 (422)
+|++|.||+|+||...
T Consensus 498 ~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 498 FASASDDGTIRIWGPS 513 (519)
T ss_pred hhccCCCCeEEEecCC
Confidence 8999999999999765
No 66
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=1.2e-26 Score=205.78 Aligned_cols=234 Identities=26% Similarity=0.418 Sum_probs=199.3
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEEEec-CCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIVGLI-GTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~-~~~i~~w~~ 179 (422)
....+.+|...+..+.| +++ ++++++.||.|++||+.+++.+..+..+. .+..+.+++++..++++. ++.+.+||+
T Consensus 43 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 122 (289)
T cd00200 43 LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122 (289)
T ss_pred cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 55678899999989988 566 99999999999999999888888887765 566799999988888554 999999999
Q ss_pred CCCceeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 180 NGLRSVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 180 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
.+.+...... ....+..+.+.+.+..+++++.++.|++||+++++.+..+..|...+.++.++|+ +.+++++.|+.++
T Consensus 123 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 202 (289)
T cd00200 123 ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIK 202 (289)
T ss_pred CCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEE
Confidence 8766442222 2223445566666566777777999999999999999999999999999999987 5888999999999
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+||++.++.. ..+.+++|+|++.++++++.+|.|++||+.+++....+..|...+.+++ |+|++++|++++.
T Consensus 203 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~~~~~ 281 (289)
T cd00200 203 LWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLA-WSPDGKRLASGSA 281 (289)
T ss_pred EEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEE-ECCCCCEEEEecC
Confidence 9999877665 6899999999998999888899999999999999999999999999999 9999999999999
Q ss_pred CCeEEEEE
Q 014590 331 DGVLRVLD 338 (422)
Q Consensus 331 dg~v~vwd 338 (422)
||.+++|+
T Consensus 282 d~~i~iw~ 289 (289)
T cd00200 282 DGTIRIWD 289 (289)
T ss_pred CCeEEecC
Confidence 99999996
No 67
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=1e-27 Score=209.17 Aligned_cols=273 Identities=18% Similarity=0.241 Sum_probs=206.9
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeE----EEeeeC--CCceeeEEEecCCCeEE-EecCCeEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKC----VEEYSL--PNAASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~----~~~~~~--~~~~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
--+|++|+..|.++++ +.| .|+|||.|-+|++||+..... .+.+.. .+.+.++.|++.+..|+ .+...+.+
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK 239 (641)
T ss_pred eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence 3478999999999999 677 999999999999999975421 122221 34677899999999887 88899999
Q ss_pred EEECCCCcee-----------eecCCCceeeeEE--EeeeCCe-EEEecCCCeEEEEeCCCcc-eeeeee-----cCCcc
Q 014590 176 IWRRNGLRSV-----------FPSREGTFMKGLC--MRYFDPE-AVVGCEDGTARVFDMYSRK-CSQIIR-----MHCAP 235 (422)
Q Consensus 176 ~w~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~-l~~~~~d~~i~iwd~~~~~-~~~~~~-----~~~~~ 235 (422)
++|.++.... +....||+....| |.++... +++++.||++++||+...+ ..+.++ +..-+
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~ 319 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP 319 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence 9998875532 2233456544444 4444443 9999999999999997654 333332 22346
Q ss_pred EEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-ee
Q 014590 236 VTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-KS 301 (422)
Q Consensus 236 v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~ 301 (422)
+.+.+|+++ ..+++|..||.|.+|+....... ..|+|+.||+||++|++-+.|+++++||+++. ++
T Consensus 320 ~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred ceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 789999987 88999999999999998543322 58999999999999999999999999999974 45
Q ss_pred eeeeccCC--CceeeeeeEecCCCEEEEEec------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccc
Q 014590 302 LWETRISP--NVVYSLQHLQNDTSTLVVGGI------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRR 373 (422)
Q Consensus 302 ~~~~~~~~--~~v~~l~~~s~~~~~l~s~~~------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~ 373 (422)
+....+-. ..-+.++ |||+.++|++|+. .|.+.+||..+.+.++.+....
T Consensus 400 L~~~tgL~t~~~~tdc~-FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~--------------------- 457 (641)
T KOG0772|consen 400 LNVRTGLPTPFPGTDCC-FSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST--------------------- 457 (641)
T ss_pred hhhhcCCCccCCCCccc-cCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCC---------------------
Confidence 54443322 2344555 9999999999874 5789999999888888875532
Q ss_pred cCCCcccccCCCCCCCCeEEEEecC--EEEEEEeCCCeEEEEE
Q 014590 374 LSAGCCIDRIPKTIRPPITCLAVGM--KKVVTTHNSKYIRLWK 414 (422)
Q Consensus 374 ~~~~~~~~~~~~~h~~~v~~i~~~~--~~l~s~s~Dg~i~iW~ 414 (422)
..|..+.|+. +.|+.|+.||+++++-
T Consensus 458 ---------------aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 458 ---------------ASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred ---------------ceEEEEeecchhhheeeecCCCceEEEE
Confidence 3677778864 6788888899998864
No 68
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.2e-27 Score=192.22 Aligned_cols=239 Identities=12% Similarity=0.116 Sum_probs=196.9
Q ss_pred ccceeEEEec--CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecC
Q 014590 112 SVGVDQCRMK--RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 112 ~~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
.+.|.+|.|. .+.|+.++.||++++||....+....+....+...++|.++...+.++.||.|+.+|+.++.....+.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igt 92 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGT 92 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCcceeecc
Confidence 6789999994 33888888999999999999888888888777788999887777779999999999999988765555
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc--
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-- 267 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-- 267 (422)
.+..+.+++..+....+++|+.|++|++||.+.......+.. ...|.++.. .++.|++|+.|..+.+||+++....
T Consensus 93 h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v-~g~~LvVg~~~r~v~iyDLRn~~~~~q 170 (323)
T KOG1036|consen 93 HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDV-SGNRLVVGTSDRKVLIYDLRNLDEPFQ 170 (323)
T ss_pred CCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEec-cCCEEEEeecCceEEEEEcccccchhh
Confidence 555556666666677799999999999999987655655543 447888887 4568889999999999999986654
Q ss_pred -------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC----eeeeeeccCC---------CceeeeeeEecCCCEEEE
Q 014590 268 -------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM----KSLWETRISP---------NVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 268 -------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~~~---------~~v~~l~~~s~~~~~l~s 327 (422)
..+.++++-|++.-.++++-||.|.+=.++.. +.-..++.|. -+|++|+ |+|-.+.++|
T Consensus 171 ~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~-Fhp~~~tfaT 249 (323)
T KOG1036|consen 171 RRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA-FHPIHGTFAT 249 (323)
T ss_pred hccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE-eccccceEEe
Confidence 78999999999999999999999988666654 3445666665 2689999 9999999999
Q ss_pred EecCCeEEEEECCCCceEEEeeecCC
Q 014590 328 GGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
|+.||.|.+||+.+.+.+..+.....
T Consensus 250 gGsDG~V~~Wd~~~rKrl~q~~~~~~ 275 (323)
T KOG1036|consen 250 GGSDGIVNIWDLFNRKRLKQLAKYET 275 (323)
T ss_pred cCCCceEEEccCcchhhhhhccCCCC
Confidence 99999999999998888888755433
No 69
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.4e-27 Score=205.77 Aligned_cols=268 Identities=17% Similarity=0.209 Sum_probs=213.8
Q ss_pred eeccccceeEEEecC----CeEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecCCeEEEEECCC
Q 014590 108 WKAHSVGVDQCRMKR----GLILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIGTRICIWRRNG 181 (422)
Q Consensus 108 l~~H~~~v~~v~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~ 181 (422)
+....+.|.+++|++ ++.+|+|. .+.||+..+....+++.. ...+..+.|..||..++ |...|.|+++|..+
T Consensus 22 ~~ke~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 22 VHKEHNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cccccCcceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 344456899999943 35666654 799999988777776554 44566699999999999 88889999999555
Q ss_pred Cce--eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcE
Q 014590 182 LRS--VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSI 256 (422)
Q Consensus 182 ~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i 256 (422)
... .+..++.+ +..+.+.+.++. +++|+.|+.+++||+.+......+.+|++.|.|.+++|. .++++|+.||.|
T Consensus 100 r~iLR~~~ah~ap-v~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 100 RVILRQLYAHQAP-VHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred HHHHHHHhhccCc-eeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 221 23444433 345666665555 889999999999999988876688999999999999975 689999999999
Q ss_pred EEEeCCCCc-cc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 257 AISGLSSDQ-RL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 257 ~iwd~~~~~-~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
++||++... .+ .+|..+.+-|.|..+++++.+ .|++||+.+| +.+.....|...|+|+. +..++..|++|
T Consensus 179 rl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~-l~s~~~rLlS~ 256 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLR-LASDSTRLLSG 256 (487)
T ss_pred EEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEE-eecCCceEeec
Confidence 999998873 33 899999999999999998855 5999999954 55556666999999999 88899999999
Q ss_pred ecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeC
Q 014590 329 GIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHN 406 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~ 406 (422)
+-|+.|++||+.+.+.+..+.. .++|.+++. +++.++.|..
T Consensus 257 sLD~~VKVfd~t~~Kvv~s~~~-------------------------------------~~pvLsiavs~dd~t~viGms 299 (487)
T KOG0310|consen 257 SLDRHVKVFDTTNYKVVHSWKY-------------------------------------PGPVLSIAVSPDDQTVVIGMS 299 (487)
T ss_pred ccccceEEEEccceEEEEeeec-------------------------------------ccceeeEEecCCCceEEEecc
Confidence 9999999999988888887755 357888888 5789999999
Q ss_pred CCeEEEEEccC
Q 014590 407 SKYIRLWKFNY 417 (422)
Q Consensus 407 Dg~i~iW~~~~ 417 (422)
||.+.+=+...
T Consensus 300 nGlv~~rr~~~ 310 (487)
T KOG0310|consen 300 NGLVSIRRREV 310 (487)
T ss_pred cceeeeehhhc
Confidence 99887654433
No 70
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.3e-26 Score=189.79 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=195.3
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC-CCceeeeEEEeeeCCeEEEecC--CCeEEEEeCCCccee
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR-EGTFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCS 226 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~ 226 (422)
...+..+.|+.+|..++ ++.|.++++||..+++.+.... ....+...++......++.++. |.+|+..++.+.+.+
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl 93 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL 93 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE
Confidence 34567799999999999 6888899999999888653332 2233446677777777777766 889999999999999
Q ss_pred eeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-
Q 014590 227 QIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM- 299 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~- 299 (422)
+.+.+|...|++++.+|. +.+++++.|++|++||++..++. ..-...+|+|+|-++|++...+.|++||++..
T Consensus 94 RYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~d 173 (311)
T KOG1446|consen 94 RYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFD 173 (311)
T ss_pred EEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccC
Confidence 999999999999999986 89999999999999999977776 56667899999999999998889999999963
Q ss_pred -eeeeeeccC---CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccC
Q 014590 300 -KSLWETRIS---PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLS 375 (422)
Q Consensus 300 -~~~~~~~~~---~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~ 375 (422)
.+..++... ....+.|. |||||++|+.+...+.+++.|.-+|..+.++..++...
T Consensus 174 kgPF~tf~i~~~~~~ew~~l~-FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~-------------------- 232 (311)
T KOG1446|consen 174 KGPFTTFSITDNDEAEWTDLE-FSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAG-------------------- 232 (311)
T ss_pred CCCceeEccCCCCccceeeeE-EcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCC--------------------
Confidence 444444433 56788999 99999999999999999999999999999998876610
Q ss_pred CCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCCC
Q 014590 376 AGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDKY 421 (422)
Q Consensus 376 ~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~~ 421 (422)
.-+ ....| |++++++|+.||+|.+|+++++.+.
T Consensus 233 ------------~~~-~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v 267 (311)
T KOG1446|consen 233 ------------NLP-LSATFTPDSKFVLSGSDDGTIHVWNLETGKKV 267 (311)
T ss_pred ------------Ccc-eeEEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence 012 23334 8999999999999999999988763
No 71
>PTZ00420 coronin; Provisional
Probab=99.96 E-value=2.2e-26 Score=215.63 Aligned_cols=217 Identities=14% Similarity=0.088 Sum_probs=162.3
Q ss_pred EecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecC-CCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCe
Q 014590 128 GVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFD-ESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE 205 (422)
Q Consensus 128 ~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~-~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (422)
|+.++.|++|+......+..+.+|.. +..++|+|+ +..
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~l---------------------------------------- 89 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEI---------------------------------------- 89 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCE----------------------------------------
Confidence 56678888888777667777776643 344666664 344
Q ss_pred EEEecCCCeEEEEeCCCc--------ceeeeeecCCccEEEEEecCC-C-EEEEEcCCCcEEEEeCCCCccc------cc
Q 014590 206 AVVGCEDGTARVFDMYSR--------KCSQIIRMHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSDQRL------TG 269 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~v~~l~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~------~~ 269 (422)
|++|+.|++|++||+.++ .++..+.+|...|.+++|+|+ . .+++++.|++|++||+++++.. ..
T Consensus 90 LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~ 169 (568)
T PTZ00420 90 LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKK 169 (568)
T ss_pred EEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCc
Confidence 555666666666665432 234456789999999999986 3 5679999999999999988754 67
Q ss_pred eEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee----EecCCCEEEEEecCC----eEEEEECCC
Q 014590 270 IKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH----LQNDTSTLVVGGIDG----VLRVLDQNT 341 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~----~s~~~~~l~s~~~dg----~v~vwd~~~ 341 (422)
|.+++|+|+|.+|++++.|+.|++||+++++.+.++.+|.+.+.+..+ |++++.+|++++.|+ +|+|||+++
T Consensus 170 V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 170 LSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred EEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 999999999999999999999999999999999999999876554332 458889999988774 799999985
Q ss_pred -CceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 342 -GEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 342 -~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
++++..+..+.. .+.+..... ++.++++|+.|++|++|++..+
T Consensus 250 ~~~pl~~~~ld~~----------------------------------~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 250 TTSALVTMSIDNA----------------------------------SAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred CCCceEEEEecCC----------------------------------ccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence 556655533221 122222222 4788999999999999999754
No 72
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.2e-26 Score=206.89 Aligned_cols=245 Identities=14% Similarity=0.203 Sum_probs=206.4
Q ss_pred ceeeEEeeccccceeEEEe-c-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-K-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
...++.++--.-+|.+..| . .+.+++|+.|..|+|++..+++.++.|..|.. +.+++.+|...+++ ++.|-+|++|
T Consensus 45 qtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW 124 (794)
T KOG0276|consen 45 QTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLW 124 (794)
T ss_pred ceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEe
Confidence 3466777778889999999 3 44999999999999999999999999998754 57799999888888 8889999999
Q ss_pred ECCCCceeeecCCCceeeeEE--EeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC---CEEEEEc
Q 014590 178 RRNGLRSVFPSREGTFMKGLC--MRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLIISGS 251 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~l~s~~ 251 (422)
|.+..-...+...||.-.+++ +.+.++. +++++.|++|++|.+.+..+..++++|...|+|+++-++ .++++|+
T Consensus 125 ~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsga 204 (794)
T KOG0276|consen 125 DWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGA 204 (794)
T ss_pred eccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecC
Confidence 999876554444444444444 4443333 999999999999999999999999999999999999865 4999999
Q ss_pred CCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 252 SLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
.|.++++||.++..++ ..|..+.|+|.-..+++|++||+++||+..+.+...++.-.-..++|++ -.+.++.
T Consensus 205 DD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~-~~k~~~~ 283 (794)
T KOG0276|consen 205 DDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIA-AHKGDGK 283 (794)
T ss_pred CCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEe-ecCCCCe
Confidence 9999999999999887 8899999999999999999999999999999998888888889999999 7788888
Q ss_pred EEEEecCCeEEEEECCCCceEEEe
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
++.|..+|.| +..+...++...+
T Consensus 284 i~vG~Deg~i-~v~lgreeP~vsM 306 (794)
T KOG0276|consen 284 IAVGFDEGSV-TVKLGREEPAVSM 306 (794)
T ss_pred EEEeccCCcE-EEEccCCCCceee
Confidence 9999888865 4455444444443
No 73
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.96 E-value=1.3e-26 Score=213.08 Aligned_cols=314 Identities=14% Similarity=0.169 Sum_probs=249.8
Q ss_pred cceeeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE--EecCCeEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV--GLIGTRIC 175 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~--~~~~~~i~ 175 (422)
.+..+++++++...|+++.-.+- .+|.|..+|+|.++|++.++.+.+|+.. ..+..++|..||..++ ++..|.+.
T Consensus 191 t~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~ 270 (910)
T KOG1539|consen 191 TGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMA 270 (910)
T ss_pred cCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEE
Confidence 35688999999999999988544 9999999999999999999999999996 6778899999999876 56669999
Q ss_pred EEECCCCceeeecCCCc--eeeeEEEeeeCCeEEEecCCCeEEEEeCCCc----ceeeeeecCCccEEEEEecC--CCEE
Q 014590 176 IWRRNGLRSVFPSREGT--FMKGLCMRYFDPEAVVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSLSLSE--DQLI 247 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~l~~~~--~~~l 247 (422)
+||++..+........| .+....+.+..|.+++++.|+.+++|=..++ +.++.-.+|..|..++.|.. +..+
T Consensus 271 ~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~i 350 (910)
T KOG1539|consen 271 FWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFI 350 (910)
T ss_pred EEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEE
Confidence 99999987543333222 2234455566677999999999998865544 34555678999999999973 3788
Q ss_pred EEEcCCCcEEEEeCCCCcc---------------c---------------------------------------------
Q 014590 248 ISGSSLGSIAISGLSSDQR---------------L--------------------------------------------- 267 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~---------------~--------------------------------------------- 267 (422)
.+++.|++.+.+++..... +
T Consensus 351 lsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~ 430 (910)
T KOG1539|consen 351 LSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFR 430 (910)
T ss_pred EecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEecc
Confidence 8999998887776542110 0
Q ss_pred ------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee---ccCCCceeeeeeEecCCCEEE
Q 014590 268 ------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET---RISPNVVYSLQHLQNDTSTLV 326 (422)
Q Consensus 268 ------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~s~~~~~l~ 326 (422)
..+++++.++.|++.+.|+..|.|.+|++.+|-...++ ..|.++|++++ .+.-++.++
T Consensus 431 n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla-~D~~n~~~v 509 (910)
T KOG1539|consen 431 NKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLA-VDGTNRLLV 509 (910)
T ss_pred CcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEE-ecCCCceEE
Confidence 56889999999999999999999999999999888888 58999999999 888888999
Q ss_pred EEecCCeEEEEECCCCceEEEeeecC---------CcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-
Q 014590 327 VGGIDGVLRVLDQNTGEVLSRCVMDI---------GSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV- 396 (422)
Q Consensus 327 s~~~dg~v~vwd~~~~~~~~~~~~~~---------~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~- 396 (422)
+++.+|.+++||......+..+.... ..-.++.+..|-.|.+.+...- ++.+...+|...|++++|
T Consensus 510 sa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~----kvvR~f~gh~nritd~~FS 585 (910)
T KOG1539|consen 510 SAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTR----KVVREFWGHGNRITDMTFS 585 (910)
T ss_pred EccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhh----hhhHHhhccccceeeeEeC
Confidence 99999999999998877666655432 2335566666766665443321 233345789999999999
Q ss_pred -cCEEEEEEeCCCeEEEEEccCCC
Q 014590 397 -GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 397 -~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
||++|++++.|++|++||+.++.
T Consensus 586 ~DgrWlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 586 PDGRWLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred CCCcEEEEeecCCcEEEEeccCcc
Confidence 79999999999999999998764
No 74
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=4.4e-27 Score=198.00 Aligned_cols=242 Identities=19% Similarity=0.246 Sum_probs=196.5
Q ss_pred hhccccceeeEEeeccccceeEEEe--cCC---eEEEEecCCeEEEEEcCCCeEE----EeeeCCC-ceeeEEEecCCCe
Q 014590 96 FALEEGRIDIDQWKAHSVGVDQCRM--KRG---LILTGVGDKVMRLWSLEGYKCV----EEYSLPN-AASLVDFDFDESK 165 (422)
Q Consensus 96 ~~~~~~~~~~~~l~~H~~~v~~v~~--~~~---~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~-~~~~~~~~~~~~~ 165 (422)
+.|...|..++++.||.++|.++++ ++. .|+++|.|.++++|..+.++.. +.-.+|. .+.+++..++|..
T Consensus 128 riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr 207 (423)
T KOG0313|consen 128 RIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTR 207 (423)
T ss_pred EEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCe
Confidence 4567778899999999999999888 333 7999999999999999877543 2333554 3556999999999
Q ss_pred EE-EecCCeEEEEECCCCc------------------------eeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEe
Q 014590 166 IV-GLIGTRICIWRRNGLR------------------------SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFD 219 (422)
Q Consensus 166 l~-~~~~~~i~~w~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd 219 (422)
++ ++.|.++.+|+..+.. ..+....||...+.++.+..+. +++++.|.+|+.||
T Consensus 208 ~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WD 287 (423)
T KOG0313|consen 208 FCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWD 287 (423)
T ss_pred EEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEE
Confidence 99 9999999999932200 0122334455555555555544 99999999999999
Q ss_pred CCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCC-CEEEEEeC
Q 014590 220 MYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCS-RLVFAGTT 287 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~-~~l~~g~~ 287 (422)
++++....++.+ ...++++..+|. +++++|+.|..|++||.+++.-. ..|.++.|+|.. ..|++|+.
T Consensus 288 letg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~ 366 (423)
T KOG0313|consen 288 LETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSY 366 (423)
T ss_pred eecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEec
Confidence 999998888775 467899999987 89999999999999999987543 789999999965 56788999
Q ss_pred CCeEEEEECCCCe-eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 288 AGYASCWDLRTMK-SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 288 dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
|+++++||+++.+ +++.+.+|...|.++. | .++..|++|+.|.+|+|+.-.
T Consensus 367 D~t~klWDvRS~k~plydI~~h~DKvl~vd-W-~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 367 DNTVKLWDVRSTKAPLYDIAGHNDKVLSVD-W-NEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred CCeEEEEEeccCCCcceeeccCCceEEEEe-c-cCCceEEeccCcceEEEeccc
Confidence 9999999999876 9999999999999999 6 367799999999999998643
No 75
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=8.5e-27 Score=191.40 Aligned_cols=278 Identities=13% Similarity=0.194 Sum_probs=222.4
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC------------C------eEEEeeeC-CCceeeEEEec
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG------------Y------KCVEEYSL-PNAASLVDFDF 161 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~------------~------~~~~~~~~-~~~~~~~~~~~ 161 (422)
.+...+..|.+++.+.+| +|| +++||+.|..|+|.|++. | -.++++-. -+.+..+.|+|
T Consensus 103 yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP 182 (430)
T KOG0640|consen 103 YETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP 182 (430)
T ss_pred cceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc
Confidence 356678899999999999 588 999999999999999872 1 12333333 34566799999
Q ss_pred CCCeEE-EecCCeEEEEECCCCce--ee-ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee---ecCCc
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRS--VF-PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII---RMHCA 234 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~ 234 (422)
....|+ ++.|++|+++|...... .+ ...+.+.+..+.+.+.+.++++|..-.++++||+++-++.-.- ..|++
T Consensus 183 re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ 262 (430)
T KOG0640|consen 183 RETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTG 262 (430)
T ss_pred hhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccc
Confidence 999999 99999999999876431 11 2233455667888888999999999999999999998876443 46899
Q ss_pred cEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeee
Q 014590 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWE 304 (422)
Q Consensus 235 ~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 304 (422)
.|+++.+++. ++.++|+.||.|++||--+++++ ..|.+..|..+|+++++.+.|..+++|.+.+++++.+
T Consensus 263 ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~ 342 (430)
T KOG0640|consen 263 AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKE 342 (430)
T ss_pred ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEE
Confidence 9999999976 89999999999999998888887 8899999999999999999999999999999999988
Q ss_pred eccCC--C---ceeeeeeEecCCCEEEEEe-cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCc
Q 014590 305 TRISP--N---VVYSLQHLQNDTSTLVVGG-IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGC 378 (422)
Q Consensus 305 ~~~~~--~---~v~~l~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~ 378 (422)
+.+.. + --+... |...+.+++.-. ..+.+.-||.+++.....+.
T Consensus 343 YtGAg~tgrq~~rtqAv-FNhtEdyVl~pDEas~slcsWdaRtadr~~l~s----------------------------- 392 (430)
T KOG0640|consen 343 YTGAGTTGRQKHRTQAV-FNHTEDYVLFPDEASNSLCSWDARTADRVALLS----------------------------- 392 (430)
T ss_pred EecCCcccchhhhhhhh-hcCccceEEccccccCceeeccccchhhhhhcc-----------------------------
Confidence 87641 1 112222 666667766554 35779999999877655542
Q ss_pred ccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 379 CIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 379 ~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
.+|.+++..+.- .+.-++|||.|..+++|--.
T Consensus 393 ------lgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 393 ------LGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred ------cCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 467788888877 47889999999999999743
No 76
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.96 E-value=1.7e-27 Score=207.28 Aligned_cols=267 Identities=15% Similarity=0.211 Sum_probs=221.3
Q ss_pred ccccceeEEEecC-C-eEEEEecCCeEEEEEcCCC---eEEEeeeC---CCceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 110 AHSVGVDQCRMKR-G-LILTGVGDKVMRLWSLEGY---KCVEEYSL---PNAASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 110 ~H~~~v~~v~~~~-~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~---~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
.|.+.|.++..++ . +++||+. |.|+|||+... ..+..+.. .+....+.+.+||+.|+ |+.-.++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 5888888888853 3 9999986 89999998643 22333332 34456688999999988 8888999999998
Q ss_pred CCceeeec---CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcE
Q 014590 181 GLRSVFPS---REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (422)
Q Consensus 181 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i 256 (422)
.....+.. ..+.....++++++.+..+++..||.|.|||+.+...+..|++|++.+.|+.++++ ..|.+|+-|.++
T Consensus 496 apTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntv 575 (705)
T KOG0639|consen 496 APTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTV 575 (705)
T ss_pred CCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccce
Confidence 77643322 22334456677778888899999999999999999999999999999999999976 789999999999
Q ss_pred EEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 257 AISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 257 ~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+.||+++++.+ +.|.++..+|++.++++|-+++.+.+.... +...+.+..|+.-|.++. |.+-|+++++.+.
T Consensus 576 RcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlK-Fa~cGkwfvStGk 653 (705)
T KOG0639|consen 576 RCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLK-FAYCGKWFVSTGK 653 (705)
T ss_pred eehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEE-ecccCceeeecCc
Confidence 99999999887 899999999999999999999999988866 445567778999999999 9999999999999
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
|+.+..|...-|..+...+. .+.|.+++. |+++|||||.|.
T Consensus 654 DnlLnawrtPyGasiFqskE-------------------------------------~SsVlsCDIS~ddkyIVTGSGdk 696 (705)
T KOG0639|consen 654 DNLLNAWRTPYGASIFQSKE-------------------------------------SSSVLSCDISFDDKYIVTGSGDK 696 (705)
T ss_pred hhhhhhccCccccceeeccc-------------------------------------cCcceeeeeccCceEEEecCCCc
Confidence 99999999888877666543 246776555 899999999999
Q ss_pred eEEEEEcc
Q 014590 409 YIRLWKFN 416 (422)
Q Consensus 409 ~i~iW~~~ 416 (422)
...||.+.
T Consensus 697 kATVYeV~ 704 (705)
T KOG0639|consen 697 KATVYEVI 704 (705)
T ss_pred ceEEEEEe
Confidence 99999864
No 77
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.5e-26 Score=208.24 Aligned_cols=255 Identities=17% Similarity=0.208 Sum_probs=211.6
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
.|+.|. ...|.+|+..+++....... .+.+..+.++++|.+|+ |..+|.|.+||....+.+......+...+-++..
T Consensus 190 ~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW 268 (484)
T KOG0305|consen 190 VLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAW 268 (484)
T ss_pred eEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEec
Confidence 566554 46899999999987766666 56677899999999999 9999999999998887654444435555667777
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEe
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKT 272 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~ 272 (422)
....+.+|+.|+.|..+|++..+.... +.+|...|..+.|+++ .++++|+.|+.+.|||....... ..|.+
T Consensus 269 ~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA 348 (484)
T KOG0305|consen 269 NSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKA 348 (484)
T ss_pred cCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeE
Confidence 788899999999999999998875544 8899999999999987 89999999999999999655554 89999
Q ss_pred EEEec-CCCEEEEEe--CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE--ecCCeEEEEECCCCceEEE
Q 014590 273 LCYNP-CSRLVFAGT--TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG--GIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 273 ~~~~~-~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~--~~dg~v~vwd~~~~~~~~~ 347 (422)
++|+| ....||+|+ .|+.|++||..++..+..+... ..|.+|. |++..+-|+++ ..++.|.||+..+.+.+..
T Consensus 349 ~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-sQVcsL~-Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~ 426 (484)
T KOG0305|consen 349 LAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-SQVCSLI-WSKKYKELLSTHGYSENQITLWKYPSMKLVAE 426 (484)
T ss_pred eeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC-CceeeEE-EcCCCCEEEEecCCCCCcEEEEeccccceeee
Confidence 99999 456788765 6999999999999999877544 7799999 99988766664 3577899999998877777
Q ss_pred eeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 348 CVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 348 ~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
+.+ |...|..+++ ||..+++|+.|.++++|++-.
T Consensus 427 l~g------------------------------------H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 427 LLG------------------------------------HTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred ecC------------------------------------CcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 755 5558888888 789999999999999999754
No 78
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=4.3e-26 Score=212.66 Aligned_cols=205 Identities=14% Similarity=0.166 Sum_probs=157.0
Q ss_pred EeeccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCCCe-------EEEeeeCCCc-eeeEEEecCCCeEEEecCCeEE
Q 014590 107 QWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYK-------CVEEYSLPNA-ASLVDFDFDESKIVGLIGTRIC 175 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~ 175 (422)
.+.||.+.|.+++| + ++ +|++|+.|++|++||+.++. .+..+.+|.. +..++|+|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~------------ 137 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA------------ 137 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC------------
Confidence 57899999999999 4 55 99999999999999997643 2334444322 2224444332
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
++.|++|+.|++|++||+++++.+..+.+|...|.+++|+|+ .++++++.|+
T Consensus 138 ---------------------------~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg 190 (493)
T PTZ00421 138 ---------------------------MNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDK 190 (493)
T ss_pred ---------------------------CCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCC
Confidence 134889999999999999999999999999999999999987 8999999999
Q ss_pred cEEEEeCCCCccc--------cceEeEEEecCCCEEEEEe----CCCeEEEEECCCCe-eeeeeccCCCceeeeeeEecC
Q 014590 255 SIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGT----TAGYASCWDLRTMK-SLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 255 ~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~----~dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~s~~ 321 (422)
+|++||+++++.+ ..+..+.|.+++..+++++ .|+.|++||+++.. ++.....+......+.+|+++
T Consensus 191 ~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d 270 (493)
T PTZ00421 191 KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDED 270 (493)
T ss_pred EEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCC
Confidence 9999999998765 2244677888887777654 47899999998754 443343343333333348999
Q ss_pred CCEEEEEe-cCCeEEEEECCCCceEEEeee
Q 014590 322 TSTLVVGG-IDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 322 ~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+++|++++ .|+.|++||+.+++.+.....
T Consensus 271 ~~~L~lggkgDg~Iriwdl~~~~~~~~~~~ 300 (493)
T PTZ00421 271 TNLLYIGSKGEGNIRCFELMNERLTFCSSY 300 (493)
T ss_pred CCEEEEEEeCCCeEEEEEeeCCceEEEeec
Confidence 99999887 499999999999887766543
No 79
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=4.6e-26 Score=183.71 Aligned_cols=228 Identities=17% Similarity=0.212 Sum_probs=185.6
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC--eEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
.+|+..|.+++| |.| +|++||.|.++.||.-..+ +++.++++|+. +.+++|+++|++|+ ++.|..|.+|.+...
T Consensus 58 ~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ded 137 (312)
T KOG0645|consen 58 DGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDED 137 (312)
T ss_pred ccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCC
Confidence 479999999999 566 9999999999999987654 78899999865 56799999999999 999999999998854
Q ss_pred c--e---eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC---cceeeeeecCCccEEEEEecCC-CEEEEEcCC
Q 014590 183 R--S---VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS---RKCSQIIRMHCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 183 ~--~---~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
. . +++.|... +..+.+.+....|++++.|++|++|+-.. -++++++.+|...|.+++|+|. ..+++++.|
T Consensus 138 dEfec~aVL~~HtqD-VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD 216 (312)
T KOG0645|consen 138 DEFECIAVLQEHTQD-VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDD 216 (312)
T ss_pred CcEEEEeeecccccc-ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCC
Confidence 3 2 24444333 33556666667799999999999998762 3589999999999999999985 799999999
Q ss_pred CcEEEEeCCCCccc---cceEeEEEecCCCEEEEEeCCCeEEEEECCCC------eeee-eeccCCCceeeeeeEecC-C
Q 014590 254 GSIAISGLSSDQRL---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM------KSLW-ETRISPNVVYSLQHLQND-T 322 (422)
Q Consensus 254 g~i~iwd~~~~~~~---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~------~~~~-~~~~~~~~v~~l~~~s~~-~ 322 (422)
+++++|-..+.-.. ..+..++|. ...|++++.|+.|++|.-... +.+. .-..|...|++++ +.|. .
T Consensus 217 ~tv~Iw~~~~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~-w~p~~~ 293 (312)
T KOG0645|consen 217 GTVSIWRLYTDLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQ-WNPKVS 293 (312)
T ss_pred cceEeeeeccCcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEE-EcCCCC
Confidence 99999986543322 788889997 558999999999999976532 1222 3356888999999 8884 6
Q ss_pred CEEEEEecCCeEEEEECC
Q 014590 323 STLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~ 340 (422)
.+|++|+.||.|++|.+.
T Consensus 294 ~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 294 NRLASGGDDGIVNFWELE 311 (312)
T ss_pred CceeecCCCceEEEEEec
Confidence 799999999999999874
No 80
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=1.1e-26 Score=198.69 Aligned_cols=260 Identities=19% Similarity=0.197 Sum_probs=208.0
Q ss_pred cceeEEEec-C-CeEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEEEecCCeEEEEECCCCceeeecC
Q 014590 113 VGVDQCRMK-R-GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 113 ~~v~~v~~~-~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
..+.++... . ..++||+.|..+.++|..+++.+..|++|..... +.++++..
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~------------------------- 274 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLD------------------------- 274 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchh-------------------------
Confidence 345666553 3 4999999999999999999999999998754322 44443322
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~- 267 (422)
.+++++.|..|++|.............|.++|+.+..+|. .+|++++.||+..+.|++++..+
T Consensus 275 ---------------~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt 339 (506)
T KOG0289|consen 275 ---------------TVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLT 339 (506)
T ss_pred ---------------heeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEE
Confidence 2788999999999998877777788899999999999986 89999999999999999999987
Q ss_pred --------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 268 --------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 268 --------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
..+++.+|+|||..+.+|..||.|++||+.++..+..|.+|.++|.+++ |+.+|-+|+++++|+.|++||+
T Consensus 340 ~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~-FsENGY~Lat~add~~V~lwDL 418 (506)
T KOG0289|consen 340 VVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAIS-FSENGYWLATAADDGSVKLWDL 418 (506)
T ss_pred EEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEE-eccCceEEEEEecCCeEEEEEe
Confidence 3489999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCceEEEeeecCC-----------cccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeC
Q 014590 340 NTGEVLSRCVMDIG-----------SASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHN 406 (422)
Q Consensus 340 ~~~~~~~~~~~~~~-----------~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~ 406 (422)
+..+..+++..... ..+++.++.|-.|+......... .++. ....|.+..+++.| +.++++++|.
T Consensus 419 RKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W-~~~~-~~~~~sg~st~v~Fg~~aq~l~s~sm 496 (506)
T KOG0289|consen 419 RKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSW-TEIK-ELADHSGLSTGVRFGEHAQYLASTSM 496 (506)
T ss_pred hhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccc-eeee-hhhhcccccceeeecccceEEeeccc
Confidence 97776666654332 33455555555555433111000 1111 12457788999999 5799999999
Q ss_pred CCeEEEEEc
Q 014590 407 SKYIRLWKF 415 (422)
Q Consensus 407 Dg~i~iW~~ 415 (422)
|..++++.+
T Consensus 497 d~~l~~~a~ 505 (506)
T KOG0289|consen 497 DAILRLYAL 505 (506)
T ss_pred hhheEEeec
Confidence 999999865
No 81
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=2e-26 Score=184.87 Aligned_cols=231 Identities=14% Similarity=0.236 Sum_probs=195.1
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCcee----eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV----FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS 226 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 226 (422)
..+..++|+.+|..++ ++.|+++.+|+++..+.. ..++.+.+....+....++.+++++.|.+|++||+++++++
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~ 100 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCT 100 (313)
T ss_pred hcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEE
Confidence 3456799999999999 999999999999876532 34455444433333344556999999999999999999999
Q ss_pred eeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC
Q 014590 227 QIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM 299 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 299 (422)
..+....+.+. +.|+|+ +++++++.|..|.+.|.++.+.. ..+..++|+.++.+++.....|+|.|......
T Consensus 101 ~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsL 179 (313)
T KOG1407|consen 101 ARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSL 179 (313)
T ss_pred EEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEecccc
Confidence 98876555554 667765 99999999999999999987766 77888999988888888888899999999999
Q ss_pred eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcc
Q 014590 300 KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCC 379 (422)
Q Consensus 300 ~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~ 379 (422)
+++..++.|.....|+. |+|+|+++|+|+.|-.+.+||+...-|++.+..+
T Consensus 180 kpv~si~AH~snCicI~-f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRl---------------------------- 230 (313)
T KOG1407|consen 180 KPVQSIKAHPSNCICIE-FDPDGRYFATGSADALVSLWDVDELICERCISRL---------------------------- 230 (313)
T ss_pred ccccccccCCcceEEEE-ECCCCceEeeccccceeeccChhHhhhheeeccc----------------------------
Confidence 99999999999999999 9999999999999999999999988888887553
Q ss_pred cccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 380 IDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 380 ~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.-+|..++| ||++|++||+|..|-|=++++|++
T Consensus 231 --------dwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~ 265 (313)
T KOG1407|consen 231 --------DWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDR 265 (313)
T ss_pred --------cCceEEEEeccCcceeeccCccceEEeEecccCCe
Confidence 458999999 799999999999998877777765
No 82
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.4e-26 Score=209.61 Aligned_cols=274 Identities=18% Similarity=0.222 Sum_probs=219.7
Q ss_pred eeEEeeccccceeEEEe-------------cCCeEEEEecCCeEEEEEcCCCeEEEe-----------------------
Q 014590 104 DIDQWKAHSVGVDQCRM-------------KRGLILTGVGDKVMRLWSLEGYKCVEE----------------------- 147 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-------------~~~~l~s~~~dg~v~iwd~~~~~~~~~----------------------- 147 (422)
+...+-.|...|+.+.. +.+.++|++.|++||+||++.+..-..
T Consensus 361 k~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~ 440 (1080)
T KOG1408|consen 361 KCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIM 440 (1080)
T ss_pred ceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhh
Confidence 44556678888888753 235799999999999999976311111
Q ss_pred ---------------eeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCe----
Q 014590 148 ---------------YSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPE---- 205 (422)
Q Consensus 148 ---------------~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---- 205 (422)
+....+..+++++|+|.+|+ |...|++++|++...+.+ ...|+ ..+.|+.+..+.
T Consensus 441 ~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHe---sEilcLeyS~p~~~~k 517 (1080)
T KOG1408|consen 441 HDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHE---SEILCLEYSFPVLTNK 517 (1080)
T ss_pred hhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheeccc---ceeEEEeecCchhhhH
Confidence 01123467799999999999 888999999999876643 33333 346777776554
Q ss_pred -EEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEec-CC--CEEEEEcCCCcEEEEeCCC---Cccc---------c
Q 014590 206 -AVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLS-ED--QLIISGSSLGSIAISGLSS---DQRL---------T 268 (422)
Q Consensus 206 -l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~-~~--~~l~s~~~dg~i~iwd~~~---~~~~---------~ 268 (422)
|++++.|..|+++|.... .+++++.+|...|+++.|. .+ ..+++++.|..|.+--.+. |... .
T Consensus 518 LLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~kt 597 (1080)
T KOG1408|consen 518 LLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKT 597 (1080)
T ss_pred hhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccc
Confidence 899999999999998543 5788999999999999998 44 5789999998875432221 2111 7
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc---CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI---SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
.+..|+..|..+++++++.|..|+|||+.+++....+++ |.+....+. .+|.|.||++.+.|.++.++|..+|+++
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~-lDPSgiY~atScsdktl~~~Df~sgEcv 676 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVI-LDPSGIYLATSCSDKTLCFVDFVSGECV 676 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEE-ECCCccEEEEeecCCceEEEEeccchhh
Confidence 889999999999999999999999999999999998876 557777787 8999999999999999999999999999
Q ss_pred EEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 346 SRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.+..+ |+..|+.+.| |-++|++++.||.|.||.+..
T Consensus 677 A~m~G------------------------------------HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 677 AQMTG------------------------------------HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred hhhcC------------------------------------cchheeeeeecccchhheeecCCceEEEEECch
Confidence 98866 4558999999 679999999999999999864
No 83
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=5e-25 Score=173.33 Aligned_cols=275 Identities=13% Similarity=0.153 Sum_probs=212.9
Q ss_pred eeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC------Ce--------EE-EeeeCC-CceeeEEEecCCCeEE-E
Q 014590 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG------YK--------CV-EEYSLP-NAASLVDFDFDESKIV-G 168 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~------~~--------~~-~~~~~~-~~~~~~~~~~~~~~l~-~ 168 (422)
+-..+.+|.+++| |.| +.+.|+..++.+|.-... +. .+ +.-++| ..+.+.+|+|+|..++ +
T Consensus 28 ~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatg 107 (350)
T KOG0641|consen 28 ILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATG 107 (350)
T ss_pred EecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEec
Confidence 3346778999999 555 889999999999874321 11 11 111222 4567799999999999 9
Q ss_pred ecCCeEEEEECCCCc-------eeeecCCCceeeeEEEeeeCCe----EEEe-cCCCeEEEEeCCCcceeeeeecCCccE
Q 014590 169 LIGTRICIWRRNGLR-------SVFPSREGTFMKGLCMRYFDPE----AVVG-CEDGTARVFDMYSRKCSQIIRMHCAPV 236 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~v 236 (422)
+.|.+|++...+... ..+..+.+.+ ..+++...... |+++ ..|..|++-|..+|+..+.+.+|++-|
T Consensus 108 sndk~ik~l~fn~dt~~~~g~dle~nmhdgti-rdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghi 186 (350)
T KOG0641|consen 108 SNDKTIKVLPFNADTCNATGHDLEFNMHDGTI-RDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHI 186 (350)
T ss_pred CCCceEEEEecccccccccCcceeeeecCCce-eeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccE
Confidence 999999997654322 2345555543 45555543322 5554 457788888999999999999999999
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee
Q 014590 237 TSLSLSEDQLIISGSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 237 ~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
.++---.+-++++|+.|.+|++||++-..++ +.|.+++..|.|++|++|-.|....+||++.++.+
T Consensus 187 lalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~i 266 (350)
T KOG0641|consen 187 LALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMI 266 (350)
T ss_pred EEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCcee
Confidence 8886547789999999999999999877665 78999999999999999999999999999999999
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
+.+..|...|.|+. |+|...++++++.|..|++-|+. |...+.+.. .
T Consensus 267 q~f~phsadir~vr-fsp~a~yllt~syd~~ikltdlq-gdla~el~~-------------------------------~ 313 (350)
T KOG0641|consen 267 QRFHPHSADIRCVR-FSPGAHYLLTCSYDMKIKLTDLQ-GDLAHELPI-------------------------------M 313 (350)
T ss_pred eeeCCCccceeEEE-eCCCceEEEEecccceEEEeecc-cchhhcCce-------------------------------E
Confidence 99999999999999 99999999999999999999987 544433321 0
Q ss_pred CCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEcc
Q 014590 383 IPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 383 ~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~ 416 (422)
....|...+..+.|. .-.+++.+.|.++.+|-+.
T Consensus 314 vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 314 VVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 013456667777784 4568899999999999764
No 84
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3.2e-26 Score=206.14 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=202.1
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeee
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFP 187 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~ 187 (422)
+.+.|+++.| ++| +|+.|..+|.|.|||..+.+.+..+.+++...+.+++..+..+. |+.++.|..+|+...+....
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~ 295 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVS 295 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhh
Confidence 4899999999 466 99999999999999999999999998855566656666677777 99999999999998775543
Q ss_pred --cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEE--cCCCcEEEEeC
Q 014590 188 --SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISG--SSLGSIAISGL 261 (422)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~--~~dg~i~iwd~ 261 (422)
......+..+.+++++..+++|+.|+.+.|||....++...+..|.+.|.+++|+|- ++||+| +.|++|++||.
T Consensus 296 ~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~ 375 (484)
T KOG0305|consen 296 TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNT 375 (484)
T ss_pred hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEc
Confidence 233445567788888899999999999999999888899999999999999999985 789987 47999999999
Q ss_pred CCCccc------cceEeEEEecCCCEEEEE--eCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCe
Q 014590 262 SSDQRL------TGIKTLCYNPCSRLVFAG--TTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGV 333 (422)
Q Consensus 262 ~~~~~~------~~v~~~~~~~~~~~l~~g--~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~ 333 (422)
.++..+ ..|.++.|++..+.|+++ ..++.|.||+..+.+.+..+.+|...|..++ ++|||..+++|+.|.+
T Consensus 376 ~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la-~SPdg~~i~t~a~DET 454 (484)
T KOG0305|consen 376 NTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLA-LSPDGETIVTGAADET 454 (484)
T ss_pred CCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEE-ECCCCCEEEEecccCc
Confidence 999888 899999999999777764 4577899999999999999999999999999 9999999999999999
Q ss_pred EEEEECCCC
Q 014590 334 LRVLDQNTG 342 (422)
Q Consensus 334 v~vwd~~~~ 342 (422)
+++|++-..
T Consensus 455 lrfw~~f~~ 463 (484)
T KOG0305|consen 455 LRFWNLFDE 463 (484)
T ss_pred EEeccccCC
Confidence 999998754
No 85
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.95 E-value=5.9e-25 Score=191.61 Aligned_cols=304 Identities=13% Similarity=0.131 Sum_probs=227.7
Q ss_pred Eeeccc-cceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEEEecCCeEEEEECCCCc
Q 014590 107 QWKAHS-VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (422)
Q Consensus 107 ~l~~H~-~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~ 183 (422)
.++++. .-|.|++| ++|-++||.++|.|.||+..+.+..+....| .++.++++-.+|..+.++.|..|..||-+-.+
T Consensus 240 ~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k 319 (626)
T KOG2106|consen 240 IFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRK 319 (626)
T ss_pred ccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccc
Confidence 345443 57999999 5779999999999999999887776655555 45566999999999889999999999822100
Q ss_pred --------------eeeec---------------------------CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC
Q 014590 184 --------------SVFPS---------------------------REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS 222 (422)
Q Consensus 184 --------------~~~~~---------------------------~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 222 (422)
.+.+. ..+.....++..++.+.+++++.|+.+++|+ .
T Consensus 320 ~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~ 397 (626)
T KOG2106|consen 320 LRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--D 397 (626)
T ss_pred cccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--C
Confidence 00000 0111234455556666799999999999999 4
Q ss_pred cceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 223 RKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
.+++.+.. -..+..|+.|+|.+.++.|+..|...+.|.++...+ .++++++|+|+|.++|.|+.|+.|++|.+
T Consensus 398 ~k~~wt~~-~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 398 HKLEWTKI-IEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred CceeEEEE-ecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence 55555543 457889999999889999999999999999986665 89999999999999999999999999988
Q ss_pred CC-Ceeeeeec-cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE---ee--------------ecCC----
Q 014590 297 RT-MKSLWETR-ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR---CV--------------MDIG---- 353 (422)
Q Consensus 297 ~~-~~~~~~~~-~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~---~~--------------~~~~---- 353 (422)
.. +....... .+..+|+.+. ||+|+++|.+-+.|-.|..|....-+.+.. ++ ...+
T Consensus 477 s~~g~~y~r~~k~~gs~ithLD-wS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~ 555 (626)
T KOG2106|consen 477 SANGRKYSRVGKCSGSPITHLD-WSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDIN 555 (626)
T ss_pred CCCCcEEEEeeeecCceeEEee-ecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHH
Confidence 74 33333332 2348899999 999999999999999999994332211111 11 0000
Q ss_pred -------cccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 354 -------SASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 354 -------~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
.-.++++.+.|.+.+....+....+..... .+|++.|++++| +..++++.+.|.+|..|++
T Consensus 556 a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~-~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 556 AVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEY-GGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred HhhhhhhhhhhhccccCceEEEEccccCCCcccceee-ccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 116678888888888877776665554444 779999999999 5677777779999999986
No 86
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=1.5e-25 Score=209.11 Aligned_cols=190 Identities=11% Similarity=0.067 Sum_probs=150.6
Q ss_pred eeeEEEee-eCCeEEEecCCCeEEEEeCCCc-------ceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCC
Q 014590 194 MKGLCMRY-FDPEAVVGCEDGTARVFDMYSR-------KCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 194 ~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~ 263 (422)
+..+++++ ++..|++|+.|++|++||+.++ +++..+.+|...|.+++|+|+ +++++++.|++|++||+.+
T Consensus 78 V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t 157 (493)
T PTZ00421 78 IIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER 157 (493)
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC
Confidence 34556666 4556999999999999999765 356778899999999999985 6899999999999999998
Q ss_pred Cccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCcee-eeeeEecCCCEEEEEe----cC
Q 014590 264 DQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVY-SLQHLQNDTSTLVVGG----ID 331 (422)
Q Consensus 264 ~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~s~~~~~l~s~~----~d 331 (422)
++.. ..|.+++|+|+|.+|++++.|+.|++||+++++.+.++.+|.+.+. .+. |.+++..+++++ .|
T Consensus 158 g~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~-w~~~~~~ivt~G~s~s~D 236 (493)
T PTZ00421 158 GKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCL-WAKRKDLIITLGCSKSQQ 236 (493)
T ss_pred CeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEE-EcCCCCeEEEEecCCCCC
Confidence 8765 6799999999999999999999999999999999999999876543 454 778877777654 47
Q ss_pred CeEEEEECCCCce-EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEe-CC
Q 014590 332 GVLRVLDQNTGEV-LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTH-NS 407 (422)
Q Consensus 332 g~v~vwd~~~~~~-~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s-~D 407 (422)
+.|++||+++... +.....+ +...+....| ++++|++++ .|
T Consensus 237 r~VklWDlr~~~~p~~~~~~d-----------------------------------~~~~~~~~~~d~d~~~L~lggkgD 281 (493)
T PTZ00421 237 RQIMLWDTRKMASPYSTVDLD-----------------------------------QSSALFIPFFDEDTNLLYIGSKGE 281 (493)
T ss_pred CeEEEEeCCCCCCceeEeccC-----------------------------------CCCceEEEEEcCCCCEEEEEEeCC
Confidence 9999999986542 2222111 1234444555 577888877 59
Q ss_pred CeEEEEEccCCC
Q 014590 408 KYIRLWKFNYSD 419 (422)
Q Consensus 408 g~i~iW~~~~~~ 419 (422)
+.|++||+..++
T Consensus 282 g~Iriwdl~~~~ 293 (493)
T PTZ00421 282 GNIRCFELMNER 293 (493)
T ss_pred CeEEEEEeeCCc
Confidence 999999998754
No 87
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=5.3e-26 Score=186.10 Aligned_cols=256 Identities=15% Similarity=0.154 Sum_probs=200.2
Q ss_pred ccccceeEEEecC--C-eEEEEecCCeEEEEEcCC-CeEEEe--eeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 110 AHSVGVDQCRMKR--G-LILTGVGDKVMRLWSLEG-YKCVEE--YSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 110 ~H~~~v~~v~~~~--~-~l~s~~~dg~v~iwd~~~-~~~~~~--~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
.-.+.|.+++|+. + .++.||.|++||+|+++. |..... ......+..++|+.||..++ ++.|+++++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 3578899999943 3 777999999999999986 344322 22234456699999999988 999999999999999
Q ss_pred cee-eecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEe
Q 014590 183 RSV-FPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISG 260 (422)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd 260 (422)
+.. +..|.+.+..+..+.... +.|++||.|++|+.||+++..++.++.- .+.+.++.. ...+++++..++.|.+|+
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L-PeRvYa~Dv-~~pm~vVata~r~i~vyn 182 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL-PERVYAADV-LYPMAVVATAERHIAVYN 182 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec-cceeeehhc-cCceeEEEecCCcEEEEE
Confidence 754 566666654333333322 2489999999999999999888888764 456777665 336888899999999999
Q ss_pred CCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC--eeeeeeccCCC---------ceeeeeeEec
Q 014590 261 LSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM--KSLWETRISPN---------VVYSLQHLQN 320 (422)
Q Consensus 261 ~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~---------~v~~l~~~s~ 320 (422)
++++... ..+.|++..+|....+.|+-+|.+.+..+..+ +.-.+++.|.. .|++|+ |+|
T Consensus 183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~-FhP 261 (347)
T KOG0647|consen 183 LENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIA-FHP 261 (347)
T ss_pred cCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceE-eec
Confidence 9876554 78999999999988999999999999988875 33456667752 477888 999
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEe
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIER 368 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~ 368 (422)
.-..|++++.||++.+||-.....+.+.+.+...+...+++.+|.+..
T Consensus 262 ~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifa 309 (347)
T KOG0647|consen 262 VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFA 309 (347)
T ss_pred ccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEE
Confidence 999999999999999999887777888877777666666666666643
No 88
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=8.3e-26 Score=209.05 Aligned_cols=243 Identities=15% Similarity=0.249 Sum_probs=200.3
Q ss_pred eeeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
.++..|.+|.++|..++|+ .+ +++||+.|-.|+||+.++.+++.++.+|- .+..+.|++.-.+++ ++.|.+|++|+
T Consensus 42 tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWN 121 (1202)
T KOG0292|consen 42 TLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWN 121 (1202)
T ss_pred hHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEe
Confidence 4677899999999999995 55 99999999999999999999999999884 456699999999999 89999999999
Q ss_pred CCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-----------------------------eeee
Q 014590 179 RNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-----------------------------CSQI 228 (422)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------------------------~~~~ 228 (422)
..+...+ .....+|.+.+..+.+....++++|.|.+|++||+..-+ ..+.
T Consensus 122 wqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~V 201 (1202)
T KOG0292|consen 122 WQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHV 201 (1202)
T ss_pred ccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeee
Confidence 9988865 233334544444455555669999999999999984210 1234
Q ss_pred eecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 229 IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 229 ~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
+.+|...|+-++|+|. ..+++|+.|..|++|.....+.= ..|.++-|+|..+.+++.++|+.|++||+..
T Consensus 202 LEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~k 281 (1202)
T KOG0292|consen 202 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTK 281 (1202)
T ss_pred ecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEeccc
Confidence 5789999999999997 89999999999999998654321 8999999999999999999999999999999
Q ss_pred CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE
Q 014590 299 MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
.+.+.+++-..+.-+.++ .+|..+++++|- |+-+.||.++.-.+...
T Consensus 282 Rt~v~tfrrendRFW~la-ahP~lNLfAAgH-DsGm~VFkleRErpa~~ 328 (1202)
T KOG0292|consen 282 RTSVQTFRRENDRFWILA-AHPELNLFAAGH-DSGMIVFKLERERPAYA 328 (1202)
T ss_pred ccceeeeeccCCeEEEEE-ecCCcceeeeec-CCceEEEEEcccCceEE
Confidence 999999987778899999 899998777665 55588888875444433
No 89
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=5.2e-27 Score=199.53 Aligned_cols=232 Identities=18% Similarity=0.247 Sum_probs=195.1
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
...+.+|.|-.++|+++.| +++ ++++++.|+.+++|++...+...++.+|... ..+.|......++ ++.|.+|+.|
T Consensus 209 ~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~W 288 (459)
T KOG0288|consen 209 SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLW 288 (459)
T ss_pred hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhh
Confidence 3467889999999999999 566 9999999999999999999999999997554 4477776666566 9999999999
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcE
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i 256 (422)
|+....+.-....+.....++. ....+++|..|+.|++||.++..+......+. .|.++..+++ ..+.+.+.|.++
T Consensus 289 Dl~k~~C~kt~l~~S~cnDI~~--~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl 365 (459)
T KOG0288|consen 289 DLQKAYCSKTVLPGSQCNDIVC--SISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTL 365 (459)
T ss_pred hhhhhheeccccccccccceEe--cceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCce
Confidence 9988665433333332222222 24458999999999999999999999988765 8999999977 678888999999
Q ss_pred EEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCC--ceeeeeeEecCCC
Q 014590 257 AISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPN--VVYSLQHLQNDTS 323 (422)
Q Consensus 257 ~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~s~~~~ 323 (422)
.+.|+++.+.. ...+.+.|||++.|+++|+.||.|+||++.++++...+..... .|++++ |+|.|.
T Consensus 366 ~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~-W~~sG~ 444 (459)
T KOG0288|consen 366 KVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLS-WNPSGS 444 (459)
T ss_pred eeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEE-EcCCCc
Confidence 99999987765 6788999999999999999999999999999999888876543 599999 999999
Q ss_pred EEEEEecCCeEEEE
Q 014590 324 TLVVGGIDGVLRVL 337 (422)
Q Consensus 324 ~l~s~~~dg~v~vw 337 (422)
.|++++.++.+.+|
T Consensus 445 ~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 445 GLLSADKQKAVTLW 458 (459)
T ss_pred hhhcccCCcceEec
Confidence 99999999999998
No 90
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.3e-26 Score=207.66 Aligned_cols=233 Identities=20% Similarity=0.316 Sum_probs=188.0
Q ss_pred cccccee---EEEe--cCC-eEEEEecCCeEEEEEcCCCeE------EEeeeCCCceeeEEEecCCCeEEEecCCeEEEE
Q 014590 110 AHSVGVD---QCRM--KRG-LILTGVGDKVMRLWSLEGYKC------VEEYSLPNAASLVDFDFDESKIVGLIGTRICIW 177 (422)
Q Consensus 110 ~H~~~v~---~v~~--~~~-~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w 177 (422)
.|...|. ++.. +++ ||+|||.||.|++|+...... +..++.|.
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~Hs------------------------- 73 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHS------------------------- 73 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhH-------------------------
Confidence 3455555 3333 455 899999999999999754211 22222221
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc--ceeeeeecCCccEEEEEe-cCC-CEEEEEcCC
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR--KCSQIIRMHCAPVTSLSL-SED-QLIISGSSL 253 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~-~~~-~~l~s~~~d 253 (422)
+ -+..+.++..++.++++|.|-+|++|+...+ -++.++..|.+.|.|+++ .++ ..+++|+-|
T Consensus 74 -------------D-WVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD 139 (735)
T KOG0308|consen 74 -------------D-WVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLD 139 (735)
T ss_pred -------------h-HHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCC
Confidence 1 1112333444556999999999999999877 578889999999999999 455 799999999
Q ss_pred CcEEEEeCCCCcc--c----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeee
Q 014590 254 GSIAISGLSSDQR--L----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSL 315 (422)
Q Consensus 254 g~i~iwd~~~~~~--~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 315 (422)
+.|.+||+.++.. + ..|++++.++.|..+++|+..+.+++||.++++.+..+++|+..|..+
T Consensus 140 ~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~l 219 (735)
T KOG0308|consen 140 RKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVL 219 (735)
T ss_pred ccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEE
Confidence 9999999998733 1 789999999999999999999999999999999999999999999999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
. .++||..++++|.||+|++||+...+|+.++..|.. .|+++.
T Consensus 220 l-~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e------------------------------------~VWaL~ 262 (735)
T KOG0308|consen 220 L-VNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKE------------------------------------GVWALQ 262 (735)
T ss_pred E-EcCCCCeEeecCCCceEEeeeccccceeeeEEeccC------------------------------------ceEEEe
Confidence 8 999999999999999999999999999999977655 577777
Q ss_pred ec--CEEEEEEeCCCeEEEEEccCC
Q 014590 396 VG--MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 396 ~~--~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.+ -..+.+|+.||.|..=|+...
T Consensus 263 ~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 263 SSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eCCCcceEEecCCCCcEEecccCCc
Confidence 73 478899999998887776653
No 91
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=1e-25 Score=194.19 Aligned_cols=261 Identities=16% Similarity=0.177 Sum_probs=189.7
Q ss_pred eeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRN 180 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~ 180 (422)
.+...-.|.+.|..+.+ |.+ .+++++..+.|.|||..+..-.....+ .+.|+
T Consensus 116 ~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~-------~~~Pd------------------ 170 (422)
T KOG0264|consen 116 EISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG-------ECRPD------------------ 170 (422)
T ss_pred EEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc-------cCCCc------------------
Confidence 44445569999999988 533 899999999999999865322211110 11111
Q ss_pred CCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc-------eeeeeecCCccEEEEEecCC--CEEEEE
Q 014590 181 GLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-------CSQIIRMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
..+.+|.+. ...++|+...+. +++++.|++|.+||+.... +...+.+|...|..++|++- ..|+++
T Consensus 171 ---l~L~gH~~e-g~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv 246 (422)
T KOG0264|consen 171 ---LRLKGHEKE-GYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSV 246 (422)
T ss_pred ---eEEEeeccc-ccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheee
Confidence 011222221 123444444443 8999999999999986432 34667899999999999973 899999
Q ss_pred cCCCcEEEEeCCCCc--cc-------cceEeEEEecC-CCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEe
Q 014590 251 SSLGSIAISGLSSDQ--RL-------TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~--~~-------~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s 319 (422)
+.|+.+.|||++++. .. ..|.|++|+|- +..||+|+.|++|.+||+|+. +++.++.+|...|.++. |+
T Consensus 247 ~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~-WS 325 (422)
T KOG0264|consen 247 GDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVE-WS 325 (422)
T ss_pred cCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEE-eC
Confidence 999999999999632 21 89999999994 567889999999999999974 57889999999999999 88
Q ss_pred cCCC-EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec-
Q 014590 320 NDTS-TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG- 397 (422)
Q Consensus 320 ~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~- 397 (422)
|+.. .||+++.|+.+.|||+..-...+.-.... | .+..+.-..+||...|..++|+
T Consensus 326 Ph~etvLASSg~D~rl~vWDls~ig~eq~~eda~----------d------------gppEllF~HgGH~~kV~DfsWnp 383 (422)
T KOG0264|consen 326 PHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAE----------D------------GPPELLFIHGGHTAKVSDFSWNP 383 (422)
T ss_pred CCCCceeEecccCCcEEEEeccccccccChhhhc----------c------------CCcceeEEecCcccccccccCCC
Confidence 8765 78999999999999997432222210000 0 0111222357899999999994
Q ss_pred --CEEEEEEeCCCeEEEEEcc
Q 014590 398 --MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 398 --~~~l~s~s~Dg~i~iW~~~ 416 (422)
.-.|+|+++|+.+.||+..
T Consensus 384 ~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 384 NEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCCeEEEEecCCceEEEeecc
Confidence 6799999999999999986
No 92
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=2.5e-25 Score=210.94 Aligned_cols=274 Identities=16% Similarity=0.099 Sum_probs=217.5
Q ss_pred eecc-ccceeEEEe-cCC-eEEEEe--cCCeEEEEEcCC------------CeEEEeeeCC-CceeeEEEecCCCeEE-E
Q 014590 108 WKAH-SVGVDQCRM-KRG-LILTGV--GDKVMRLWSLEG------------YKCVEEYSLP-NAASLVDFDFDESKIV-G 168 (422)
Q Consensus 108 l~~H-~~~v~~v~~-~~~-~l~s~~--~dg~v~iwd~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~l~-~ 168 (422)
+-+| ...|.++.. ++| .++||+ .|+.++||+.+. .+.+.....| ..+.++.|++||.+|+ |
T Consensus 8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG 87 (942)
T KOG0973|consen 8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASG 87 (942)
T ss_pred ccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeec
Confidence 3344 456888988 677 999999 899999998653 1122223333 4567799999999999 8
Q ss_pred ecCCeEEEEECCC-----------C---------ceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee
Q 014590 169 LIGTRICIWRRNG-----------L---------RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI 228 (422)
Q Consensus 169 ~~~~~i~~w~~~~-----------~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 228 (422)
+.|+.|.+|.... + ..++..|.+.+ ..++|.+++..+++++.|++|.+|+..+.+.+..
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV-~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~v 166 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDV-LDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKV 166 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCcc-ceeccCCCccEEEEecccceEEEEccccceeeee
Confidence 9999999998772 0 01244444443 3577778888899999999999999999999999
Q ss_pred eecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------cceEeEEEecCCCEEEEEe----CCCe
Q 014590 229 IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------TGIKTLCYNPCSRLVFAGT----TAGY 290 (422)
Q Consensus 229 ~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~~l~~g~----~dg~ 290 (422)
+++|.+.|..+.|+|- ++|++-+.|++|++|++.+-... .....+.|||||.+|++.. .-..
T Consensus 167 l~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~ 246 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKST 246 (942)
T ss_pred eecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcce
Confidence 9999999999999984 99999999999999997663322 6788899999999999874 2346
Q ss_pred EEEEECCCCeeeeeeccCCCceeeeeeEecC-----CC------------EEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 291 ASCWDLRTMKSLWETRISPNVVYSLQHLQND-----TS------------TLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 291 i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~-----~~------------~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
+.|.+-.+.+.-..+-+|..++.++. |+|. .+ .+|+|+.|++|.||.....+++.....-
T Consensus 247 ~~IieR~tWk~~~~LvGH~~p~evvr-FnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l-- 323 (942)
T KOG0973|consen 247 IAIIERGTWKVDKDLVGHSAPVEVVR-FNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL-- 323 (942)
T ss_pred eEEEecCCceeeeeeecCCCceEEEE-eChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh--
Confidence 88888888888889999999999999 7652 11 6789999999999998777666554221
Q ss_pred cccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 354 SASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 354 ~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
....|..++| ||-.|+.+|.||+|.+..++.+
T Consensus 324 ---------------------------------f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 324 ---------------------------------FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred ---------------------------------hcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 1258999999 6999999999999999998754
No 93
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=3.8e-25 Score=190.78 Aligned_cols=267 Identities=15% Similarity=0.137 Sum_probs=204.9
Q ss_pred eEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 105 IDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
+..+..|.-+|.||+++ ++ +.++++.|++|.-|++.+++....+-....+.-..+.|-
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~-------------------- 194 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPL-------------------- 194 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCC--------------------
Confidence 56788999999999994 55 999999999999999999876522211100000000000
Q ss_pred ceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeC
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~ 261 (422)
+.....|..+ +-.+++++++.+|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.+ +.+++++.|+++++|++
T Consensus 195 k~~r~~h~ke-il~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 195 KESRKGHVKE-ILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred Ccccccccce-eEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEeh
Confidence 0000122222 235667778888999999999999999999999999999999999999876 78999999999999999
Q ss_pred CCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeE
Q 014590 262 SSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVL 334 (422)
Q Consensus 262 ~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v 334 (422)
.....+ ..|..+....-++.+-+|+.|.++++|++.. +....+.+|.+.+-|++++ +...+++|+.||.|
T Consensus 274 ~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~I--n~~HfvsGSdnG~I 350 (479)
T KOG0299|consen 274 DQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFI--NDEHFVSGSDNGSI 350 (479)
T ss_pred hHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEe--cccceeeccCCceE
Confidence 877665 7888888888888888899999999999964 3334678888899999943 55689999999999
Q ss_pred EEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEE
Q 014590 335 RVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~i 412 (422)
.+|++...+++.+....++..... -+-.+...|++++. ...+++||+.+|.|++
T Consensus 351 aLWs~~KKkplf~~~~AHgv~~~~------------------------~~~~~~~Witsla~i~~sdL~asGS~~G~vrL 406 (479)
T KOG0299|consen 351 ALWSLLKKKPLFTSRLAHGVIPEL------------------------DPVNGNFWITSLAVIPGSDLLASGSWSGCVRL 406 (479)
T ss_pred EEeeecccCceeEeeccccccCCc------------------------cccccccceeeeEecccCceEEecCCCCceEE
Confidence 999999999998877654411000 00122358899988 6799999999999999
Q ss_pred EEccCCC
Q 014590 413 WKFNYSD 419 (422)
Q Consensus 413 W~~~~~~ 419 (422)
|.+..+-
T Consensus 407 W~i~~g~ 413 (479)
T KOG0299|consen 407 WKIEDGL 413 (479)
T ss_pred EEecCCc
Confidence 9998773
No 94
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=7.8e-25 Score=180.56 Aligned_cols=272 Identities=16% Similarity=0.230 Sum_probs=199.8
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe-----EE-EeeeCCCceeeEEEecCCCeEE--EecCC
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK-----CV-EEYSLPNAASLVDFDFDESKIV--GLIGT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~l~--~~~~~ 172 (422)
-.+..|+||.+.|++++| +|| +|+|++.|++|++|++..-+ ++ ..++. .....+.|+||-+.++ .....
T Consensus 77 l~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~-dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 77 LNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY-DHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccC-CCceEEEECCCcceEEEEEccCC
Confidence 356789999999999999 577 99999999999999987632 11 11221 2456799999988876 55678
Q ss_pred eEEEEECCCCc----ee-------eecCCCceeee--EEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEE
Q 014590 173 RICIWRRNGLR----SV-------FPSREGTFMKG--LCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSL 239 (422)
Q Consensus 173 ~i~~w~~~~~~----~~-------~~~~~~~~~~~--~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l 239 (422)
++++|.+...+ .. +..+..+.+.+ +.....+.++++++.|..|.+|++. |+.+..+......-...
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~a 234 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDA 234 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccce
Confidence 89999764322 11 11122222222 3333445569999999999999997 99999888777777788
Q ss_pred EecCC-CEEEEEcCCCcEEEEeCC---CCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC----C
Q 014590 240 SLSED-QLIISGSSLGSIAISGLS---SDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT----M 299 (422)
Q Consensus 240 ~~~~~-~~l~s~~~dg~i~iwd~~---~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----~ 299 (422)
+.+|+ +++++++..-.+++|.+- .|... ..|..++|+++...+++.+.||++++||+.- +
T Consensus 235 avSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~ 314 (420)
T KOG2096|consen 235 AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG 314 (420)
T ss_pred eeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence 89987 889999999999999863 33222 8899999999999999999999999999862 1
Q ss_pred ---eeeeee----ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeecc
Q 014590 300 ---KSLWET----RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGR 372 (422)
Q Consensus 300 ---~~~~~~----~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~ 372 (422)
+.+.+. ....+....++ .+|+|+.|+.+. ...++++..++|+....+.
T Consensus 315 qDpk~Lk~g~~pl~aag~~p~RL~-lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e----------------------- 369 (420)
T KOG2096|consen 315 QDPKILKEGSAPLHAAGSEPVRLE-LSPSGDSLAVSF-GSDLKVFASEDGKDYPELE----------------------- 369 (420)
T ss_pred CCchHhhcCCcchhhcCCCceEEE-eCCCCcEEEeec-CCceEEEEcccCccchhHH-----------------------
Confidence 122221 11123334677 899999888765 4469999988887665553
Q ss_pred ccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEE
Q 014590 373 RLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~ 414 (422)
..|...|++|+| +|++++|+| |..+++..
T Consensus 370 ------------~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 370 ------------DIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred ------------HhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 347789999999 689999987 56677765
No 95
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.94 E-value=2.5e-24 Score=198.24 Aligned_cols=184 Identities=21% Similarity=0.297 Sum_probs=165.0
Q ss_pred eeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee---ecCCccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc--
Q 014590 194 MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-- 267 (422)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-- 267 (422)
...+++++.++..+.|+..|+|.+|++++|-....+ ..|.++|..++... ++.+++++.+|.+++||..+...+
T Consensus 451 ~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~ 530 (910)
T KOG1539|consen 451 ATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKS 530 (910)
T ss_pred eEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeee
Confidence 456777888888999999999999999999888888 58999999999974 479999999999999999887754
Q ss_pred ----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 268 ----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 268 ----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
..+.++..+.....++.+..|-.|.++|..+.+.++.+.+|.+.|+.++ |||||++|++++.|++|++||+.++.
T Consensus 531 l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~-FS~DgrWlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 531 LRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMT-FSPDGRWLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred eccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeE-eCCCCcEEEEeecCCcEEEEeccCcc
Confidence 7888888888888999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCC-CeEEEEEc
Q 014590 344 VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNS-KYIRLWKF 415 (422)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~D-g~i~iW~~ 415 (422)
++..+... .+.+++.| +|.+|+|+..| .-|.+|.-
T Consensus 610 lID~~~vd-------------------------------------~~~~sls~SPngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 610 LIDGLLVD-------------------------------------SPCTSLSFSPNGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred eeeeEecC-------------------------------------CcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence 98887542 46777888 68999999998 67999963
No 96
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2.7e-24 Score=200.10 Aligned_cols=231 Identities=16% Similarity=0.188 Sum_probs=193.0
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC-eEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCce
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY-KCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRS 184 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~ 184 (422)
.+|+..-+.++| ++| +|++++.||.|++|+.... +....+.. .+..+.++...+.+++ ++.+++|.+|....+..
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~-~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDI-SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEE 88 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhc-cCceeEEEeecccceEEeeccceEEEeeCCCCCc
Confidence 479999999999 566 9999999999999997665 33333332 3445566666666776 99999999999987763
Q ss_pred e-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC
Q 014590 185 V-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 185 ~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~ 262 (422)
- .-....-....+++...+..++.|+.|-.|++.++.+......+++|.++|.++.++|. +++++.+.||.|++||+.
T Consensus 89 ~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 89 DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred cceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 2 22222333457888888899999999999999999999999999999999999999987 899999999999999999
Q ss_pred CCccc---------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--CCCceeeeeeEecCCCEE
Q 014590 263 SDQRL---------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI--SPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 263 ~~~~~---------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~s~~~~~l 325 (422)
++... ..+..++|+|+|..+++...|+.|++|+..+++....+.. +...+..+. |+|+|+||
T Consensus 169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~-wsPnG~Yi 247 (933)
T KOG1274|consen 169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQ-WSPNGKYI 247 (933)
T ss_pred cchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEE-EcCCCcEE
Confidence 88765 5567789999999999999999999999999988888765 334478888 99999999
Q ss_pred EEEecCCeEEEEECCC
Q 014590 326 VVGGIDGVLRVLDQNT 341 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~ 341 (422)
|+++.||.|.|||+++
T Consensus 248 AAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 248 AASTLDGQILVWNVDT 263 (933)
T ss_pred eeeccCCcEEEEeccc
Confidence 9999999999999986
No 97
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.94 E-value=3.8e-23 Score=185.50 Aligned_cols=257 Identities=14% Similarity=0.104 Sum_probs=193.1
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
.++|++.|+.+++||+.+++.+..+..+.....++|+|++..++ +..++.|.+||..+++.......+.....+++.+
T Consensus 3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 82 (300)
T TIGR03866 3 AYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHP 82 (300)
T ss_pred EEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECC
Confidence 68899999999999999999999998776667799999999774 5678999999999876543222222234566777
Q ss_pred eCCeEE-EecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC-cEEEEeCCCCccc------cceEe
Q 014590 202 FDPEAV-VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG-SIAISGLSSDQRL------TGIKT 272 (422)
Q Consensus 202 ~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg-~i~iwd~~~~~~~------~~v~~ 272 (422)
.++.++ +++.++.+++||+.+++.+..+.. ...+.+++++|+ ..+++++.++ .+.+||..+++.. ..+.+
T Consensus 83 ~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 161 (300)
T TIGR03866 83 NGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRF 161 (300)
T ss_pred CCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccE
Confidence 777654 455689999999998887777653 234678999987 6777777665 5677898877654 45678
Q ss_pred EEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCC-----C--ceeeeeeEecCCCEEEE-EecCCeEEEEECCCCc
Q 014590 273 LCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISP-----N--VVYSLQHLQNDTSTLVV-GGIDGVLRVLDQNTGE 343 (422)
Q Consensus 273 ~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~-----~--~v~~l~~~s~~~~~l~s-~~~dg~v~vwd~~~~~ 343 (422)
++|+|+++++++++ .++.|++||+.+++.+..+..+. . ....++ ++|++++++. .+.++.+.+||+.+++
T Consensus 162 ~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~s~dg~~~~~~~~~~~~i~v~d~~~~~ 240 (300)
T TIGR03866 162 AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIK-LTKDGKTAFVALGPANRVAVVDAKTYE 240 (300)
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceE-ECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 99999999886554 68999999999988776654321 1 234577 8999998554 4557789999999887
Q ss_pred eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEE-eCCCeEEEEEccCCC
Q 014590 344 VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTT-HNSKYIRLWKFNYSD 419 (422)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~-s~Dg~i~iW~~~~~~ 419 (422)
....+.. ...+.+++| ++++|+++ +.+|.|++||+..++
T Consensus 241 ~~~~~~~-------------------------------------~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 241 VLDYLLV-------------------------------------GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred EEEEEEe-------------------------------------CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 7655422 125778888 67788776 569999999998765
No 98
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.93 E-value=1.9e-24 Score=185.17 Aligned_cols=235 Identities=11% Similarity=0.149 Sum_probs=198.0
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
.+..|+||...|+.+.++ +. .+++++.|..|+||......+......|+ .+..+..+|.|.+|+ ++.|+...+.|.
T Consensus 253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~ 332 (506)
T KOG0289|consen 253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDI 332 (506)
T ss_pred hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEc
Confidence 456789999999999995 44 99999999999999988776666665554 456699999999999 899999999999
Q ss_pred CCCceeeecCC---CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 180 NGLRSVFPSRE---GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 180 ~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
.++..+..... +.......+.+++-.+.+|..|+.|+|||+.++..+..|.+|+++|..++|+.+ -++++++.|+.
T Consensus 333 ~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~ 412 (506)
T KOG0289|consen 333 SSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGS 412 (506)
T ss_pred cCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCe
Confidence 99886533222 233455667777777999999999999999999999999999999999999966 78999999999
Q ss_pred EEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECC--CCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 256 IAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR--TMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 256 i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
|++||++..+.. ..+.++.|.+.|.+|+.++.|=.|++++-. +...+..+..|.+..+++. |....+++
T Consensus 413 V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~-Fg~~aq~l 491 (506)
T KOG0289|consen 413 VKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVR-FGEHAQYL 491 (506)
T ss_pred EEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceee-ecccceEE
Confidence 999999987655 569999999999999999888777777633 4677778888988889998 98899999
Q ss_pred EEEecCCeEEEEEC
Q 014590 326 VVGGIDGVLRVLDQ 339 (422)
Q Consensus 326 ~s~~~dg~v~vwd~ 339 (422)
+++|.|..++++.+
T Consensus 492 ~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 492 ASTSMDAILRLYAL 505 (506)
T ss_pred eeccchhheEEeec
Confidence 99999999888764
No 99
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.93 E-value=3.8e-25 Score=181.75 Aligned_cols=209 Identities=15% Similarity=0.263 Sum_probs=168.2
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeee
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQII 229 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~ 229 (422)
....+.+|++||..++ |+.|..|++.|++...... .+. .+..+. .+.+ -.++++
T Consensus 113 ~~cR~aafs~DG~lvATGsaD~SIKildvermlaks-~~~--------------em~~~~---------~qa~hPvIRTl 168 (430)
T KOG0640|consen 113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKS-KPK--------------EMISGD---------TQARHPVIRTL 168 (430)
T ss_pred cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhc-chh--------------hhccCC---------cccCCceEeeh
Confidence 4456688999999888 8888888888876422110 000 011111 1112 346777
Q ss_pred ecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC
Q 014590 230 RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM 299 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 299 (422)
-.|.++|+++.|+|. .++++|+.|++|++||+...... .+|.++.|+|.|.++++|..-..+++||+.+.
T Consensus 169 YDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~ 248 (430)
T KOG0640|consen 169 YDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTY 248 (430)
T ss_pred hhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccce
Confidence 789999999999986 89999999999999999765433 89999999999999999999999999999998
Q ss_pred eeeeee---ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCC
Q 014590 300 KSLWET---RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSA 376 (422)
Q Consensus 300 ~~~~~~---~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~ 376 (422)
++...- ..|.+.|+++. +++.+++.++|+.||.|++||=-+++|+.++...++
T Consensus 249 QcfvsanPd~qht~ai~~V~-Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~----------------------- 304 (430)
T KOG0640|consen 249 QCFVSANPDDQHTGAITQVR-YSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG----------------------- 304 (430)
T ss_pred eEeeecCcccccccceeEEE-ecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC-----------------------
Confidence 876543 45889999999 999999999999999999999988999988865333
Q ss_pred CcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 377 GCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 377 ~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
...|.+..| +++++++.|.|..+++|.+.++.
T Consensus 305 -----------gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 305 -----------GSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGR 338 (430)
T ss_pred -----------CceeeeEEEccCCeEEeecCCcceeeeeeecCCc
Confidence 357888889 89999999999999999998763
No 100
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.93 E-value=4.8e-24 Score=189.60 Aligned_cols=296 Identities=12% Similarity=0.113 Sum_probs=221.0
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCe--EEEecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK--IVGLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~i~~w~~ 179 (422)
+...++||++.|.|+.. +.| +|++|+.||+|+||.+.+|.|+.++.....+.+++|+|.+.. |+++.+..+.+.+.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 34568999999999999 556 999999999999999999999999999988999999997765 34555555666664
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCeEEEe----cCCCeEEEEeCCCcc----eeeeeecCCccEEEEEecC-CCEEEEE
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPEAVVG----CEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLSE-DQLIISG 250 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~-~~~l~s~ 250 (422)
.=+..+....... .|+++ ..++.+..|.-...+ -+...-.|..+|..+.|+. +.+|++.
T Consensus 472 ~~G~~~e~~~t~e------------ll~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV 539 (733)
T KOG0650|consen 472 IFGDRLEVGPTKE------------LLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATV 539 (733)
T ss_pred cccchhhhcchhh------------hhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEe
Confidence 4332211111110 02222 345678888754221 1334456889999999994 5888887
Q ss_pred cCC---CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 251 SSL---GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 251 ~~d---g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
..+ ..|.|.++...... +.|.++.|+|...+|++++.. .|++||+..++.+.++......|.+++ .+|
T Consensus 540 ~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~ms-ihp 617 (733)
T KOG0650|consen 540 MPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMS-IHP 617 (733)
T ss_pred ccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeee-ecC
Confidence 554 57889998766554 889999999999999999865 599999999888888887788999999 999
Q ss_pred CCCEEEEEecCCeEEEEECCCC-ceEEEeeecCC----------cccccCCCCCCeEEeeecccc---CCCc--ccccCC
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTG-EVLSRCVMDIG----------SASSSSNKVSGVIERNEGRRL---SAGC--CIDRIP 384 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~-~~~~~~~~~~~----------~~~~~~~s~d~~i~~~~~~~~---~~~~--~~~~~~ 384 (422)
.|..|+.|+.|+.+..||+.-+ ++.+++..|.. ....+++++||.+.+..+... .++. ......
T Consensus 618 ~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L 697 (733)
T KOG0650|consen 618 NGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRL 697 (733)
T ss_pred CCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeec
Confidence 9999999999999999999743 44555554444 447789999999887655432 2221 112233
Q ss_pred CCCCCC----eEEEEec--CEEEEEEeCCCeEEEE
Q 014590 385 KTIRPP----ITCLAVG--MKKVVTTHNSKYIRLW 413 (422)
Q Consensus 385 ~~h~~~----v~~i~~~--~~~l~s~s~Dg~i~iW 413 (422)
.+|... |..+.|+ ..+|+|+|.||+|++|
T Consensus 698 ~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 698 RGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 556544 7788885 5799999999999998
No 101
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.6e-24 Score=173.32 Aligned_cols=227 Identities=16% Similarity=0.232 Sum_probs=178.8
Q ss_pred cccceeEEEec---CCeEEEEecCCeEEEEEcCC-CeEEEeeeCCCce-eeEEEecCCCe-EE-EecCCeEEEEECCCCc
Q 014590 111 HSVGVDQCRMK---RGLILTGVGDKVMRLWSLEG-YKCVEEYSLPNAA-SLVDFDFDESK-IV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 111 H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~-~~~~~~~~~~~-l~-~~~~~~i~~w~~~~~~ 183 (422)
-.+.+..|+|+ ++.+++++.||++++||... ..++..++.|... .++.+++-.+. ++ ++.|++|++|+...+.
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~ 138 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN 138 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence 35677888884 23899999999999999643 3577888877554 55888885544 44 8999999999988776
Q ss_pred ee--eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC--CCEEEEEcCCCcEEE
Q 014590 184 SV--FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE--DQLIISGSSLGSIAI 258 (422)
Q Consensus 184 ~~--~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~dg~i~i 258 (422)
.+ +.++. ..+....+++..+. ++++|.|+++++||++..-....+..|...+.++.|+. .+.+++|+.|+.|+.
T Consensus 139 Sv~Tf~gh~-~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~ 217 (311)
T KOG0277|consen 139 SVQTFNGHN-SCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRG 217 (311)
T ss_pred ceEeecCCc-cEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEE
Confidence 44 44433 33344555655544 89999999999999986544455899999999999994 389999999999999
Q ss_pred EeCCCCccc--------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEec-CCCEEEE
Q 014590 259 SGLSSDQRL--------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQN-DTSTLVV 327 (422)
Q Consensus 259 wd~~~~~~~--------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~-~~~~l~s 327 (422)
||+++.+.. ..|..+.|||.. ..|++++.|-+++|||...+ ..+.+...|+.-|..+. |++ ++.++|+
T Consensus 218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~D-ws~~~~~~vAs 296 (311)
T KOG0277|consen 218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLD-WSLFDPGQVAS 296 (311)
T ss_pred EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccc-cccccCceeee
Confidence 999986654 789999999965 68899999999999999844 45666778889999999 654 5669999
Q ss_pred EecCCeEEEEEC
Q 014590 328 GGIDGVLRVLDQ 339 (422)
Q Consensus 328 ~~~dg~v~vwd~ 339 (422)
.+.|+.++||+.
T Consensus 297 ~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 297 TGWDELLYVWNP 308 (311)
T ss_pred cccccceeeecc
Confidence 999999999984
No 102
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=4.7e-23 Score=193.29 Aligned_cols=217 Identities=12% Similarity=0.141 Sum_probs=162.7
Q ss_pred eeEEeeccccceeEEEec-C-C-eEEEEecCCeEEEEEcCCCe--------EEEeeeCCC-ceeeEEEecCCCeE-E-Ee
Q 014590 104 DIDQWKAHSVGVDQCRMK-R-G-LILTGVGDKVMRLWSLEGYK--------CVEEYSLPN-AASLVDFDFDESKI-V-GL 169 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~-~-~l~s~~~dg~v~iwd~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~l-~-~~ 169 (422)
.+..+.+|.+.|.+++|+ + + +|+||+.||+|+|||+.++. .+..+.+|. .+..++|+|++..+ + ++
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe
Confidence 567899999999999994 3 4 99999999999999997642 233455554 45669999998865 4 78
Q ss_pred cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEE-----ecCC
Q 014590 170 IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS-----LSED 244 (422)
Q Consensus 170 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~-----~~~~ 244 (422)
.|++|++||+.+++..........+..+++++++..|++++.|+.|++||+++++.+..+.+|.+.+.+.. |+++
T Consensus 146 ~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d 225 (568)
T PTZ00420 146 FDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD 225 (568)
T ss_pred CCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC
Confidence 89999999999887554333334456777888888899999999999999999999999999987654433 3455
Q ss_pred -CEEEEEcCCC----cEEEEeCCCC-ccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--
Q 014590 245 -QLIISGSSLG----SIAISGLSSD-QRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-- 307 (422)
Q Consensus 245 -~~l~s~~~dg----~i~iwd~~~~-~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-- 307 (422)
+++++++.|+ +|++||+++. ..+ +.+...-..++|.++++|+.|+.|++|++..+. +..+..
T Consensus 226 ~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~ 304 (568)
T PTZ00420 226 DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYK 304 (568)
T ss_pred CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-EEeecccc
Confidence 7888877764 7999999863 333 222223334568899999999999999998763 222222
Q ss_pred CCCceeeeeeEecCC
Q 014590 308 SPNVVYSLQHLQNDT 322 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~ 322 (422)
+..++.+++ |.|..
T Consensus 305 s~~p~~g~~-f~Pkr 318 (568)
T PTZ00420 305 SCSPFRSFG-FLPKQ 318 (568)
T ss_pred cCCCccceE-Ecccc
Confidence 446677888 77754
No 103
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=8e-24 Score=183.05 Aligned_cols=268 Identities=15% Similarity=0.166 Sum_probs=193.0
Q ss_pred EecC-CeEEEEEcCCCeEEEeeeCCCceee--EEEecCCCeEE--EecCCeEEEEECCCCceee-ecCCCceeeeEEEee
Q 014590 128 GVGD-KVMRLWSLEGYKCVEEYSLPNAASL--VDFDFDESKIV--GLIGTRICIWRRNGLRSVF-PSREGTFMKGLCMRY 201 (422)
Q Consensus 128 ~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~ 201 (422)
++.| .++.+||+.+|.....|++...... +..- .+.+++ ......+.+|.+....... ...-...+..+...+
T Consensus 13 sS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n 91 (476)
T KOG0646|consen 13 SSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSN 91 (476)
T ss_pred cCCCCcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecCC
Confidence 3344 4599999999999999987522211 1111 234555 3344678999987765432 122222233455555
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------------- 267 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------------- 267 (422)
.+.+++.|+..|.+++|.+.+|..+..+.+|...|+++.|+.| .++++|+.||.|.+|++.+--..
T Consensus 92 ~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~ 171 (476)
T KOG0646|consen 92 LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS 171 (476)
T ss_pred CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeec
Confidence 6666888879999999999999999999999999999999965 89999999999999987532111
Q ss_pred ---cceEeEEEecC--CCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 268 ---TGIKTLCYNPC--SRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 268 ---~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
-+|+.+...+. ..++++++.|.++++||+..+..+.++.- ...+.+++ .+|.+..++.|+.+|.|.+.++...
T Consensus 172 ~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si~av~-lDpae~~~yiGt~~G~I~~~~~~~~ 249 (476)
T KOG0646|consen 172 DHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSIKAVA-LDPAERVVYIGTEEGKIFQNLLFKL 249 (476)
T ss_pred cCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCcceeEE-EcccccEEEecCCcceEEeeehhcC
Confidence 66777776654 46899999999999999999998887754 46789999 9999999999999999999887643
Q ss_pred ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCC--CeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 343 EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRP--PITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~--~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
..... .+..=.+..+++ -.....+|.+ +|+|++. ||.+|++|+.||.++|||+.+.
T Consensus 250 ~~~~~------~v~~k~~~~~~t--------------~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~ 309 (476)
T KOG0646|consen 250 SGQSA------GVNQKGRHEENT--------------QINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSK 309 (476)
T ss_pred Ccccc------cccccccccccc--------------eeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchH
Confidence 32110 000000001110 1112356666 9999888 8999999999999999998753
No 104
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3.5e-24 Score=186.27 Aligned_cols=228 Identities=17% Similarity=0.236 Sum_probs=182.3
Q ss_pred eeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE--EecCCeEEEEECCCC
Q 014590 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV--GLIGTRICIWRRNGL 182 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~ 182 (422)
+.-..+.|.++.| +|| +|+.|+..|.|+|+|.++...+..+..|.. +..+.|+|+++.++ |+.|+.+++||+.+.
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a 143 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA 143 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence 4445678999999 688 999999999999999776556666766644 55699999777665 778899999999988
Q ss_pred ceeeecCCCcee--eeEEEeeeC-CeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 183 RSVFPSREGTFM--KGLCMRYFD-PEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 183 ~~~~~~~~~~~~--~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
.. .....++.. .+.++.+.. ..+++|+.||.|++||++.. ..+..+. |..+|..+.+-|+ ..+++++ ...++
T Consensus 144 ~v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-Gn~vk 220 (487)
T KOG0310|consen 144 YV-QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAG-GNSVK 220 (487)
T ss_pred EE-EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcC-CCeEE
Confidence 74 223333333 333344433 35999999999999999877 5555554 8999999999987 6777765 46899
Q ss_pred EEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 258 ISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 258 iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
+||+.+|... ..|+|+++..++..|++|+-|+.|++||+.+.+.+..+.- .++|.+++ .+|+++.++.|.
T Consensus 221 VWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~-~~pvLsia-vs~dd~t~viGm 298 (487)
T KOG0310|consen 221 VWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY-PGPVLSIA-VSPDDQTVVIGM 298 (487)
T ss_pred EEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeec-ccceeeEE-ecCCCceEEEec
Confidence 9999866655 7899999999999999999999999999988888888764 58899999 999999999999
Q ss_pred cCCeEEEEECC
Q 014590 330 IDGVLRVLDQN 340 (422)
Q Consensus 330 ~dg~v~vwd~~ 340 (422)
.||.+.+=+..
T Consensus 299 snGlv~~rr~~ 309 (487)
T KOG0310|consen 299 SNGLVSIRRRE 309 (487)
T ss_pred ccceeeeehhh
Confidence 99988776443
No 105
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.1e-23 Score=181.88 Aligned_cols=287 Identities=15% Similarity=0.213 Sum_probs=225.8
Q ss_pred hhhccccceeeEEeec------cccceeEEEecCC--eEEEEecCCeEEEEEcCC--CeEEEeeeCC-CceeeEEEecCC
Q 014590 95 RFALEEGRIDIDQWKA------HSVGVDQCRMKRG--LILTGVGDKVMRLWSLEG--YKCVEEYSLP-NAASLVDFDFDE 163 (422)
Q Consensus 95 ~~~~~~~~~~~~~l~~------H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~--~~~~~~~~~~-~~~~~~~~~~~~ 163 (422)
...+.++.-.+..++. -.+.|++|.|+.+ .|++|+.||+++||.++. ...++.+... -++...+|.|+|
T Consensus 190 s~~Lp~~tl~~krlkDaNa~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G 269 (514)
T KOG2055|consen 190 SKLLPPGTLNIKRLKDANAAHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNG 269 (514)
T ss_pred cccCCCceeeeEeecccccCCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCC
Confidence 3445555555555542 3468999999655 999999999999998864 2344444432 345669999999
Q ss_pred C-eEE-EecCCeEEEEECCCCcee----eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEE
Q 014590 164 S-KIV-GLIGTRICIWRRNGLRSV----FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVT 237 (422)
Q Consensus 164 ~-~l~-~~~~~~i~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 237 (422)
. .++ ++....++.||+.+.+.. ..+.......-..++++++.++..+..|.|.+....+++.+.+++ -.+.|.
T Consensus 270 ~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~ 348 (514)
T KOG2055|consen 270 HSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVS 348 (514)
T ss_pred ceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEe
Confidence 9 555 777788999999887632 233334455667788899999999999999999999999998887 468899
Q ss_pred EEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCC------Ceee
Q 014590 238 SLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT------MKSL 302 (422)
Q Consensus 238 ~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~------~~~~ 302 (422)
.++|+.+ ..+++.+.+|.|.+||++...++ ..-++++.+++|.++|+|+..|.|.|||..+ .+++
T Consensus 349 ~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPi 428 (514)
T KOG2055|consen 349 DFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPI 428 (514)
T ss_pred eEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCch
Confidence 9999965 78888888999999999998776 3456778889999999999999999999763 3667
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEec--CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccc
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGI--DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCI 380 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~ 380 (422)
.++..-...|+++. |+++.+.||.+|. +..+++-.+.+......++....
T Consensus 429 k~~dNLtt~Itsl~-Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~--------------------------- 480 (514)
T KOG2055|consen 429 KTVDNLTTAITSLQ-FNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNT--------------------------- 480 (514)
T ss_pred hhhhhhheeeeeee-eCcchhhhhhhhhccccceEEEeccceeeeccCCCCCC---------------------------
Confidence 77776678899999 9999999888774 67899988887777666655322
Q ss_pred ccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 381 DRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 381 ~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
--+.|+|++| ++.+|+.|..+|.+.+|.+.
T Consensus 481 ------~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 481 ------KVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred ------cccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 1257999999 58999999999999999874
No 106
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=2.9e-24 Score=177.68 Aligned_cols=235 Identities=16% Similarity=0.213 Sum_probs=191.6
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCcee----eecC-----CCceeeeEEEeeeCCeEEEecCCCeEEEEeCC
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV----FPSR-----EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY 221 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 221 (422)
..+.+..|+|||.+|+ ++.||-|.+||..+++.. ++.. .+..+.+++++.++..+++|+.||.|++|.++
T Consensus 214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 3456789999999999 999999999999887622 1111 12334455666666779999999999999999
Q ss_pred Ccceeeeee-cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEE
Q 014590 222 SRKCSQIIR-MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYAS 292 (422)
Q Consensus 222 ~~~~~~~~~-~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~ 292 (422)
+|.++..|. +|+..|+++.|+.| ..+++++.|.++++.-+.+|+.+ +.|+...|.+||..+++++.||+|+
T Consensus 294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvk 373 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVK 373 (508)
T ss_pred cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEE
Confidence 999999986 89999999999966 78999999999999999999988 8899999999999999999999999
Q ss_pred EEECCCCeeeeeeccC--CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeee
Q 014590 293 CWDLRTMKSLWETRIS--PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNE 370 (422)
Q Consensus 293 iwd~~~~~~~~~~~~~--~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~ 370 (422)
+|+..+.+++.+++.. ..+|+++..+..+...++.+...++|+|.++. |+.++.+.....
T Consensus 374 vW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkR----------------- 435 (508)
T KOG0275|consen 374 VWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKR----------------- 435 (508)
T ss_pred EecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCc-----------------
Confidence 9999999999888653 46788887565566789999999999999987 888888754322
Q ss_pred ccccCCCcccccCCCCCCCCeEEE-EecCEEEEEEeCCCeEEEEEccCCC
Q 014590 371 GRRLSAGCCIDRIPKTIRPPITCL-AVGMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 371 ~~~~~~~~~~~~~~~~h~~~v~~i-~~~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.-...|.++ +..|.++.+.++|+.+..+.+.++.
T Consensus 436 ---------------EgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~ 470 (508)
T KOG0275|consen 436 ---------------EGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGK 470 (508)
T ss_pred ---------------cCCceEEEEecCCCcEEEEEccCcEEEEEEeecCc
Confidence 011344443 3368999999999999988887653
No 107
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=9.6e-24 Score=182.22 Aligned_cols=215 Identities=21% Similarity=0.323 Sum_probs=178.6
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-EecCCeEEEEECCCCce
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLRS 184 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~ 184 (422)
++|...|.+++. +|| |||+|+.|..|.||+..+.+.++.+.+|.... .++|-.....++ ++.|+++++|+++....
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~ 278 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY 278 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH
Confidence 499999999999 577 99999999999999999999999999886554 489988777777 99999999999987663
Q ss_pred --eeecCCCceeeeEEEeeeCC--eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEe
Q 014590 185 --VFPSREGTFMKGLCMRYFDP--EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISG 260 (422)
Q Consensus 185 --~~~~~~~~~~~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd 260 (422)
.+.+|++.+ ..+...+. .+-+|+.|+++++|++. .+....+.+|.+.+-|++|-++..+++|+.+|.|.+|+
T Consensus 279 vetlyGHqd~v---~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs 354 (479)
T KOG0299|consen 279 VETLYGHQDGV---LGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWS 354 (479)
T ss_pred HHHHhCCccce---eeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEee
Confidence 355555543 44444333 35566699999999994 44555678899999999999999999999999999999
Q ss_pred CCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC----eeeeeeccCCCceeeeee
Q 014590 261 LSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM----KSLWETRISPNVVYSLQH 317 (422)
Q Consensus 261 ~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~l~~ 317 (422)
+...+.+ ..|++++..|...++++|+.+|.|++|-+..+ +++..+. -.+.|++++
T Consensus 355 ~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~- 432 (479)
T KOG0299|consen 355 LLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLA- 432 (479)
T ss_pred ecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEE-
Confidence 9888776 27999999999999999999999999998876 4555655 458899999
Q ss_pred EecCCCEEEEEe
Q 014590 318 LQNDTSTLVVGG 329 (422)
Q Consensus 318 ~s~~~~~l~s~~ 329 (422)
|+++|+.|++|.
T Consensus 433 f~~sgk~ivagi 444 (479)
T KOG0299|consen 433 FSNSGKRIVAGI 444 (479)
T ss_pred EccCCCEEEEec
Confidence 999999766663
No 108
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.92 E-value=3.7e-23 Score=187.00 Aligned_cols=282 Identities=12% Similarity=0.131 Sum_probs=214.4
Q ss_pred eeeEEeeccccceeEEEec---C-C-eEEEEecCCeEEEEEcCCCe---------------------EEEee--------
Q 014590 103 IDIDQWKAHSVGVDQCRMK---R-G-LILTGVGDKVMRLWSLEGYK---------------------CVEEY-------- 148 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~---~-~-~l~s~~~dg~v~iwd~~~~~---------------------~~~~~-------- 148 (422)
..+..++||.+.|.+++|. . . +|+|+|.|..||||.+.-+. ....+
T Consensus 182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 4678899999999999992 2 3 99999999999999864221 11111
Q ss_pred --eCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCCcee------eecCCCce--eeeEEEeeeCCeEEEecCCCeEE
Q 014590 149 --SLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV------FPSREGTF--MKGLCMRYFDPEAVVGCEDGTAR 216 (422)
Q Consensus 149 --~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~ 216 (422)
.+|+. +..+.|+|.+..|+ ++.|.++.+|..+...-+ +....+.. ....-+.++++.+++-+..|..+
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence 13433 45689999996666 999999999998776322 11112222 23344555666688999999999
Q ss_pred EEeCCCc---ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------------------
Q 014590 217 VFDMYSR---KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------------------------- 267 (422)
Q Consensus 217 iwd~~~~---~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------------------------- 267 (422)
+|..... .....+.+|.+.|.+++|+|. .++++.+.|.+-++|--- |+..
T Consensus 342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w-g~q~~wHEiaRPQiHGyDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW-GRQQEWHEIARPQIHGYDLTCLSFVNEDL 420 (764)
T ss_pred EEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccc-ccccceeeecccccccccceeeehccCCc
Confidence 9984332 234556789999999999975 899999999988887543 1100
Q ss_pred --------------------------------------------------------------------------------
Q 014590 268 -------------------------------------------------------------------------------- 267 (422)
Q Consensus 268 -------------------------------------------------------------------------------- 267 (422)
T Consensus 421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L 500 (764)
T KOG1063|consen 421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL 500 (764)
T ss_pred eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence
Q ss_pred -------------------------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 268 -------------------------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 268 -------------------------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
..|.+++.+|+|+++|+++.. ..|++|+..+...+..+.+|.-.|+.++
T Consensus 501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~- 579 (764)
T KOG1063|consen 501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLA- 579 (764)
T ss_pred cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEE-
Confidence 679999999999999999854 3589999999988889999999999999
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV- 396 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~- 396 (422)
|||||++|++.|.|.++.+|....... ..+.. ...+.|+..|.+.+|
T Consensus 580 FSpdg~~LLsvsRDRt~sl~~~~~~~~-~e~~f-------------------------------a~~k~HtRIIWdcsW~ 627 (764)
T KOG1063|consen 580 FSPDGRYLLSVSRDRTVSLYEVQEDIK-DEFRF-------------------------------ACLKAHTRIIWDCSWS 627 (764)
T ss_pred ECCCCcEEEEeecCceEEeeeeecccc-hhhhh-------------------------------ccccccceEEEEcccC
Confidence 999999999999999999998753221 11111 013678999999999
Q ss_pred -cCEEEEEEeCCCeEEEEEccCC
Q 014590 397 -GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 397 -~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
++.+++|+|.|.+|++|.....
T Consensus 628 pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 628 PDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred cccceeEEecCCceEEEEeccCc
Confidence 6788999999999999998765
No 109
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.92 E-value=7.2e-23 Score=167.33 Aligned_cols=273 Identities=18% Similarity=0.256 Sum_probs=193.1
Q ss_pred EeeccccceeEEEec--CC-eEEEEecCCeEEEEEcCCCe------------EEEeeeC---CC-ceeeEEEec-CCCeE
Q 014590 107 QWKAHSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYK------------CVEEYSL---PN-AASLVDFDF-DESKI 166 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~------------~~~~~~~---~~-~~~~~~~~~-~~~~l 166 (422)
.-..|.+.|.++... .| |+++|+.||.|.+||++... ++-...+ |. .+..+.|-| |...+
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF 117 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF 117 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence 345689999999983 45 99999999999999997632 1100111 11 233466666 44445
Q ss_pred E-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCC---eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec
Q 014590 167 V-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDP---EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 167 ~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 242 (422)
. ++.|.++++||.++.+..........+...++++... .+++|..+-.|++-|+.+|...+++.+|.+.|.++.|+
T Consensus 118 tssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Ws 197 (397)
T KOG4283|consen 118 TSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWS 197 (397)
T ss_pred ecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEec
Confidence 5 8899999999999987553332222233344444322 38889999999999999999999999999999999999
Q ss_pred CC--CEEEEEcCCCcEEEEeCCCCcc-c---------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 243 ED--QLIISGSSLGSIAISGLSSDQR-L---------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 243 ~~--~~l~s~~~dg~i~iwd~~~~~~-~---------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
|. -.+++|+.||.|++||++...- . +.+..++|+.++.++++.+.|..+++|+..+
T Consensus 198 p~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~ 277 (397)
T KOG4283|consen 198 PSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMES 277 (397)
T ss_pred cCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeeccc
Confidence 86 4789999999999999986411 1 7899999999999999999999999999988
Q ss_pred Ceeeeeec---cCCCceeeeee--EecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccc
Q 014590 299 MKSLWETR---ISPNVVYSLQH--LQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRR 373 (422)
Q Consensus 299 ~~~~~~~~---~~~~~v~~l~~--~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~ 373 (422)
|+....-. .|+. -.+.++ -+.+...++---.++.+.++++-+|..+..+..|-
T Consensus 278 G~ntl~~~g~~~~n~-~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~--------------------- 335 (397)
T KOG4283|consen 278 GRNTLREFGPIIHNQ-TTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHL--------------------- 335 (397)
T ss_pred Ccccccccccccccc-cccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeeccc---------------------
Confidence 75332111 1211 111110 11222333333345778888888888888876652
Q ss_pred cCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 374 LSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 374 ~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
..|.|.++ +-+...+|..|+.|..|-+.
T Consensus 336 ---------------k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 336 ---------------KRINCAAYRPDFEQCFTGDMNGNIYMWSPA 365 (397)
T ss_pred ---------------ceeeEEeecCchhhhhccccCCcccccccc
Confidence 36777777 34667888888888888764
No 110
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.92 E-value=9.9e-24 Score=190.70 Aligned_cols=227 Identities=15% Similarity=0.207 Sum_probs=189.3
Q ss_pred eeEEeeccccceeE-EEec--CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEEEecCCeEEEEE
Q 014590 104 DIDQWKAHSVGVDQ-CRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 104 ~~~~l~~H~~~v~~-v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
....+++|.+.|.+ +++. ++ .+++|+.|++|.+|......++..+.+|....+ ++...++..+-++.|.++++|.
T Consensus 49 ~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~ 128 (745)
T KOG0301|consen 49 ETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWR 128 (745)
T ss_pred cceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEec
Confidence 34568899999888 8883 44 899999999999999999999999999976655 6656667644499999999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIA 257 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~ 257 (422)
.......+.+|... +.++...+. .+++|+.|.+|++|.- ++.++++.+|.+.|+.+++-|+..|++++.||.|+
T Consensus 129 ~~~l~~~l~gH~as---VWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir 203 (745)
T KOG0301|consen 129 IGELVYSLQGHTAS---VWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIR 203 (745)
T ss_pred chhhhcccCCcchh---eeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEE
Confidence 87766555555544 555555554 4999999999999985 88999999999999999999998999999999999
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+|++ +|+.+ ..+.+++..+++..++++++|+++++|+.. ++.+.+......|+++. +-++|. |++|+.
T Consensus 204 ~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~-~L~NgD-Ivvg~S 278 (745)
T KOG0301|consen 204 LWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAK-VLLNGD-IVVGGS 278 (745)
T ss_pred EEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEE-EeeCCC-EEEecc
Confidence 9999 55555 788899977888999999999999999977 67777776666899998 556665 788999
Q ss_pred CCeEEEEECC
Q 014590 331 DGVLRVLDQN 340 (422)
Q Consensus 331 dg~v~vwd~~ 340 (422)
||.||||...
T Consensus 279 DG~VrVfT~~ 288 (745)
T KOG0301|consen 279 DGRVRVFTVD 288 (745)
T ss_pred CceEEEEEec
Confidence 9999999875
No 111
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=1.9e-23 Score=189.38 Aligned_cols=215 Identities=17% Similarity=0.169 Sum_probs=155.4
Q ss_pred eEEEecCCCeEEEEeCCCcce---eeeeecCCccEEEEEecC------------CCEEEEEcCCCcEEEEeCCCCccc--
Q 014590 205 EAVVGCEDGTARVFDMYSRKC---SQIIRMHCAPVTSLSLSE------------DQLIISGSSLGSIAISGLSSDQRL-- 267 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~~------------~~~l~s~~~dg~i~iwd~~~~~~~-- 267 (422)
.+.....|..+++||++.-+. ...+-.|..-|+.+..-| ...|++++.|++|++||+..+..-
T Consensus 338 klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~v 417 (1080)
T KOG1408|consen 338 KLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQV 417 (1080)
T ss_pred eEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccce
Confidence 377778889999999876543 234456777777765433 357999999999999999762210
Q ss_pred ------------------------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 268 ------------------------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 268 ------------------------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
..+.+++.+|+|++||+|..-|++++||+.+.+....+
T Consensus 418 yrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~ 497 (1080)
T KOG1408|consen 418 YRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFM 497 (1080)
T ss_pred eecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhhe
Confidence 77999999999999999999999999999999888899
Q ss_pred ccCCCceeeeeeEec---CCCEEEEEecCCeEEEEECCC-CceEEEeeecCCccccc------------CCCCCCeEEee
Q 014590 306 RISPNVVYSLQHLQN---DTSTLVVGGIDGVLRVLDQNT-GEVLSRCVMDIGSASSS------------SNKVSGVIERN 369 (422)
Q Consensus 306 ~~~~~~v~~l~~~s~---~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~------------~~s~d~~i~~~ 369 (422)
..|+..|.|+. ++. ..++||+++.|..|+|||+.. -.+++++.+|...+..+ +.+.|..+...
T Consensus 498 eAHesEilcLe-yS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr 576 (1080)
T KOG1408|consen 498 EAHESEILCLE-YSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFR 576 (1080)
T ss_pred ecccceeEEEe-ecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhee
Confidence 99999999999 653 246899999999999999964 45667888877766333 22333333221
Q ss_pred eccccCCCccc-ccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccCCCC
Q 014590 370 EGRRLSAGCCI-DRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 370 ~~~~~~~~~~~-~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.......+... ......-...+..++.| .+++++++.|..|+||+++.+++
T Consensus 577 ~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq 630 (1080)
T KOG1408|consen 577 VNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ 630 (1080)
T ss_pred hhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccce
Confidence 11111111100 00001112457778885 68999999999999999998764
No 112
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=8.9e-24 Score=168.15 Aligned_cols=225 Identities=14% Similarity=0.162 Sum_probs=179.8
Q ss_pred eeeEEEeeeCCeEEEecCCCeEEEEeCCCc---ceeeeeecCCccEEEEEec-C--CCEEEEEcCCCcEEEEeCCCCccc
Q 014590 194 MKGLCMRYFDPEAVVGCEDGTARVFDMYSR---KCSQIIRMHCAPVTSLSLS-E--DQLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~-~--~~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
+....+.+.+..|++++.|++|+|+..+.. +.+.++.+|.+||+.++|. | +++|++++.||.|.+|.-.+++-.
T Consensus 14 IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~ 93 (299)
T KOG1332|consen 14 IHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWT 93 (299)
T ss_pred hhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchh
Confidence 344566778888999999999999998754 4678899999999999998 6 389999999999999999888543
Q ss_pred ---------cceEeEEEecC--CCEEEEEeCCCeEEEEECCCC---eeeeeeccCCCceeeeeeEecC---C--------
Q 014590 268 ---------TGIKTLCYNPC--SRLVFAGTTAGYASCWDLRTM---KSLWETRISPNVVYSLQHLQND---T-------- 322 (422)
Q Consensus 268 ---------~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~s~~---~-------- 322 (422)
..|++++|.|. |-.|++++.||.|.|.+.++. ........|.-.|++++ +.|. |
T Consensus 94 k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVs-wapa~~~g~~~~~~~~ 172 (299)
T KOG1332|consen 94 KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVS-WAPASAPGSLVDQGPA 172 (299)
T ss_pred hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceee-ecCcCCCccccccCcc
Confidence 88999999885 468999999999999988753 22334567998999998 7665 4
Q ss_pred ---CEEEEEecCCeEEEEECCCCc--eEEEeeecCCcc--------------cccCCCCCCeEEeeeccccCCCcccccC
Q 014590 323 ---STLVVGGIDGVLRVLDQNTGE--VLSRCVMDIGSA--------------SSSSNKVSGVIERNEGRRLSAGCCIDRI 383 (422)
Q Consensus 323 ---~~l~s~~~dg~v~vwd~~~~~--~~~~~~~~~~~~--------------~~~~~s~d~~i~~~~~~~~~~~~~~~~~ 383 (422)
+.|++|+.|..|+||+..+++ ...++..|.+.+ .+++++.||++.+|+.. ...+.--.++
T Consensus 173 ~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~-~e~e~wk~tl 251 (299)
T KOG1332|consen 173 AKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD-EEYEPWKKTL 251 (299)
T ss_pred cccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec-CccCcccccc
Confidence 579999999999999988753 345577777744 67899999999988776 2222222333
Q ss_pred CCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 384 PKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 384 ~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.......+..++| .|+.|+.++.|..+.+|.-....|
T Consensus 252 l~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gk 290 (299)
T KOG1332|consen 252 LEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGK 290 (299)
T ss_pred cccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCc
Confidence 3445678999999 699999999999999998765544
No 113
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=1.1e-22 Score=167.23 Aligned_cols=254 Identities=13% Similarity=0.167 Sum_probs=175.5
Q ss_pred eccccceeEEEec-CC-eEEEEecCCeEEEEEcCCC----eEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 109 KAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 109 ~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
.+|.+-|.++.|+ -| .+|||+.|++|+|||..+. .+....+.|++
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~----------------------------- 60 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDG----------------------------- 60 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCC-----------------------------
Confidence 4799999999993 55 9999999999999996543 33333443322
Q ss_pred ceeeecCCCceeeeEEEe-eeCCeEEEecCCCeEEEEeCCCc---------ceeeeeecCCccEEEEEecCC---CEEEE
Q 014590 183 RSVFPSREGTFMKGLCMR-YFDPEAVVGCEDGTARVFDMYSR---------KCSQIIRMHCAPVTSLSLSED---QLIIS 249 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~v~~l~~~~~---~~l~s 249 (422)
.+..+.-.. .++..+++++.|+++.||.-... ....++....+.|+++.|.|. =.+++
T Consensus 61 ---------Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~ 131 (361)
T KOG2445|consen 61 ---------SIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAA 131 (361)
T ss_pred ---------cEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEE
Confidence 221111111 24555899999999999975211 133455666789999999985 47999
Q ss_pred EcCCCcEEEEeCCCCccc--------------------cceEeEEEecCC---CEEEEEeCC-----CeEEEEECCCC--
Q 014590 250 GSSLGSIAISGLSSDQRL--------------------TGIKTLCYNPCS---RLVFAGTTA-----GYASCWDLRTM-- 299 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~--------------------~~v~~~~~~~~~---~~l~~g~~d-----g~i~iwd~~~~-- 299 (422)
++.||.++||+..+...+ .+-.|+.|+|.. .+||+|+.+ +.++||.....
T Consensus 132 ~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~r 211 (361)
T KOG2445|consen 132 ASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGR 211 (361)
T ss_pred eccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcc
Confidence 999999999997654433 566788888743 678888866 46888876532
Q ss_pred --eeeeeeccCCCceeeeeeEecCC----CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccc
Q 014590 300 --KSLWETRISPNVVYSLQHLQNDT----STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRR 373 (422)
Q Consensus 300 --~~~~~~~~~~~~v~~l~~~s~~~----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~ 373 (422)
..+.++.+|..+|+.++ |.|+- ..||+++.|| |+||.+...... .... + + .+...-+.
T Consensus 212 Kw~kva~L~d~~dpI~di~-wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~-i~~e--e-~--~~~~~~~~-------- 275 (361)
T KOG2445|consen 212 KWLKVAELPDHTDPIRDIS-WAPNIGRSYHLLAVATKDG-VRIFKVKVARSA-IEEE--E-V--LAPDLMTD-------- 275 (361)
T ss_pred eeeeehhcCCCCCcceeee-eccccCCceeeEEEeecCc-EEEEEEeeccch-hhhh--c-c--cCCCCccc--------
Confidence 45667889999999999 88863 3799999999 999998732110 0000 0 0 00000000
Q ss_pred cCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccCC
Q 014590 374 LSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 374 ~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
-+.........|.+.|..+.|| |..|++.|.||.||+|+....
T Consensus 276 --l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~ 320 (361)
T KOG2445|consen 276 --LPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYN 320 (361)
T ss_pred --cceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhh
Confidence 0111223346799999999995 999999999999999987654
No 114
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=7.1e-22 Score=178.41 Aligned_cols=238 Identities=16% Similarity=0.191 Sum_probs=194.0
Q ss_pred eEEeeccccceeEEEec--CCeEEEEecCCeEEEEEcCCCeE-EEeeeCCC--ceeeEEEecCCCeEEEecCCeEEEEEC
Q 014590 105 IDQWKAHSVGVDQCRMK--RGLILTGVGDKVMRLWSLEGYKC-VEEYSLPN--AASLVDFDFDESKIVGLIGTRICIWRR 179 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~w~~ 179 (422)
.+-+.--..+|.+++|+ ++.||.+-.||.|.+|++..+-. ...+.++. .+..++|++.++.+-.+.+|.|.-||+
T Consensus 18 crf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl 97 (691)
T KOG2048|consen 18 CRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDL 97 (691)
T ss_pred EEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEec
Confidence 34455567899999994 44999999999999999987643 34455543 345699996666666999999999999
Q ss_pred CCCceee-ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceee--eeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 180 NGLRSVF-PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 180 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
.+.+... ....+..+..++.++.+..++.|+.||.+..++...++... .+....+.|.+++|+|+ ..+++|+.||.
T Consensus 98 ~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 98 HTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV 177 (691)
T ss_pred ccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCce
Confidence 9988664 45567777888888888889999999988888887766543 33445689999999987 56999999999
Q ss_pred EEEEeCCCCccc---------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 256 IAISGLSSDQRL---------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 256 i~iwd~~~~~~~---------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
|++||..++..+ .-|.++.|-.+ ..+++|...|+|.+||...+.++..+..|...|.+++ ..+
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~La-v~~ 255 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALA-VAD 255 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEE-EcC
Confidence 999999988765 34666666644 4799999999999999999999999999999999999 999
Q ss_pred CCCEEEEEecCCeEEEEECCCCce
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
++.++++++.|+.|.-|...+++.
T Consensus 256 ~~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 256 NEDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred CCCeEEEccCCCceEEEEecCCcc
Confidence 999999999999999888776544
No 115
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.92 E-value=9.9e-22 Score=171.67 Aligned_cols=273 Identities=18% Similarity=0.227 Sum_probs=195.1
Q ss_pred eeEEeeccccceeEEEec---CC-eEEEE--ecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEE
Q 014590 104 DIDQWKAHSVGVDQCRMK---RG-LILTG--VGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~---~~-~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
.++.+..-...|.|++|+ .| +++.- +.+..+.+||...+......+..+.+ ....|.|.+..++ ....+.+.
T Consensus 146 TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~ 225 (626)
T KOG2106|consen 146 TLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLY 225 (626)
T ss_pred eeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEE
Confidence 345555677889999993 34 44443 45678899999988777777654444 4589999666555 88899999
Q ss_pred EEECCCCce-----eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEE
Q 014590 176 IWRRNGLRS-----VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIIS 249 (422)
Q Consensus 176 ~w~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s 249 (422)
+|+.+++.. ++..++.. .+.|+.+..+. +++|..+|.|.||+..+.+..+....|.+.|.+++...+..+++
T Consensus 226 Fw~~~~~~l~k~~~~fek~ekk--~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS 303 (626)
T KOG2106|consen 226 FWTLRGGSLVKRQGIFEKREKK--FVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS 303 (626)
T ss_pred EEEccCCceEEEeeccccccce--EEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee
Confidence 999987652 34555553 45566554443 99999999999999988887777779999999999988888888
Q ss_pred EcCCCcEEEEeCCCCc--cc------------------------------------------------------------
Q 014590 250 GSSLGSIAISGLSSDQ--RL------------------------------------------------------------ 267 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~--~~------------------------------------------------------------ 267 (422)
|+.|..|..||-.-.+ .+
T Consensus 304 GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~ 383 (626)
T KOG2106|consen 304 GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQL 383 (626)
T ss_pred cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhhe
Confidence 9999999999822111 00
Q ss_pred ------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 268 ------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 268 ------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
.+..|++|+|.| .+|.|+..|...+.|.++...+..-.. ..+++++. |+|+|.
T Consensus 384 ~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~-ysp~G~ 460 (626)
T KOG2106|consen 384 LTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVR-YSPDGA 460 (626)
T ss_pred eeccCcceEEEccCCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEE-EcCCCC
Confidence 444455555555 555555555555555555333333333 67888998 999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKV 401 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l 401 (422)
+||.|+.|+.|++|-+..........+ ..|.++|+.++| |+++|
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~~y~r~~----------------------------------k~~gs~ithLDwS~Ds~~~ 506 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGRKYSRVG----------------------------------KCSGSPITHLDWSSDSQFL 506 (626)
T ss_pred EEEEecCCCeEEEEEECCCCcEEEEee----------------------------------eecCceeEEeeecCCCceE
Confidence 999999999999998865433333222 112368999999 78999
Q ss_pred EEEeCCCeEEEEEc
Q 014590 402 VTTHNSKYIRLWKF 415 (422)
Q Consensus 402 ~s~s~Dg~i~iW~~ 415 (422)
.+-+.|--|..|..
T Consensus 507 ~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 507 VSNSGDYEILYWKP 520 (626)
T ss_pred EeccCceEEEEEcc
Confidence 99999999999943
No 116
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.8e-23 Score=180.91 Aligned_cols=227 Identities=19% Similarity=0.218 Sum_probs=185.6
Q ss_pred CCeEEEEec-CCeEEEEEcCCCeEEE-eeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeee--
Q 014590 122 RGLILTGVG-DKVMRLWSLEGYKCVE-EYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKG-- 196 (422)
Q Consensus 122 ~~~l~s~~~-dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~-- 196 (422)
+.|++++.. -..+.+|.+....... .+..+..+.+++-+|+|.+++ ++-.|.+++|.+.++..+... ..|...+
T Consensus 50 ~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~-~aHYQ~ITc 128 (476)
T KOG0646|consen 50 NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVL-SAHYQSITC 128 (476)
T ss_pred hhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHH-HhhccceeE
Confidence 346666654 4578899987654433 555677788899999999999 459999999999999854222 3343334
Q ss_pred EEEeeeCCeEEEecCCCeEEEEeCC---------CcceeeeeecCCccEEEEEecCC---CEEEEEcCCCcEEEEeCCCC
Q 014590 197 LCMRYFDPEAVVGCEDGTARVFDMY---------SRKCSQIIRMHCAPVTSLSLSED---QLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 197 ~~~~~~~~~l~~~~~d~~i~iwd~~---------~~~~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg~i~iwd~~~~ 264 (422)
+.+..++..+++|+.||.|.+|++. +-+++..+..|.-+|+++...++ ..++++|.|.++++||+..+
T Consensus 129 L~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g 208 (476)
T KOG0646|consen 129 LKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG 208 (476)
T ss_pred EEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc
Confidence 4445566679999999999999863 34578888999999999999865 69999999999999999999
Q ss_pred ccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC----------------eeeeeeccCCC--ceeeeeeEec
Q 014590 265 QRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM----------------KSLWETRISPN--VVYSLQHLQN 320 (422)
Q Consensus 265 ~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----------------~~~~~~~~~~~--~v~~l~~~s~ 320 (422)
..+ ..+.+++.+|.++.+++|+.+|.|.+.++.+. ..+..+.+|.+ .|+|++ .+.
T Consensus 209 ~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa-is~ 287 (476)
T KOG0646|consen 209 VLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA-IST 287 (476)
T ss_pred eeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE-Eec
Confidence 887 89999999999999999999999999877532 23456778887 999999 999
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
||..|++|+.||.|.|||+.+.++++++..
T Consensus 288 DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~ 317 (476)
T KOG0646|consen 288 DGTLLLSGDEDGKVCVWDIYSKQCIRTLQT 317 (476)
T ss_pred CccEEEeeCCCCCEEEEecchHHHHHHHhh
Confidence 999999999999999999999999888763
No 117
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.7e-23 Score=193.69 Aligned_cols=196 Identities=16% Similarity=0.291 Sum_probs=169.8
Q ss_pred eeeEEeeccccceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEec-CCCeEE-EecCCeEEEEEC
Q 014590 103 IDIDQWKAHSVGVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDF-DESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~~~~i~~w~~ 179 (422)
.+++.|.||.+.|..+.|+ +++|+|+|.|++||+|++...++++.|.+.+-+.+++|+| |.++++ |+-|+.+++|++
T Consensus 360 kP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI 439 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSI 439 (712)
T ss_pred cchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeec
Confidence 4678899999999999996 5599999999999999999999999999999999999999 667777 999999999999
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--C------CccEEEEEecCC--CEEEE
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--H------CAPVTSLSLSED--QLIIS 249 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~------~~~v~~l~~~~~--~~l~s 249 (422)
...+.+....-...+..+|+.++|+..++|+.+|.+++|++...+....... | ...|+.+.|.|+ ..+++
T Consensus 440 ~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLV 519 (712)
T KOG0283|consen 440 SDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLV 519 (712)
T ss_pred CcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEE
Confidence 9998876666667888999999999999999999999999987665544321 1 237999999986 56888
Q ss_pred EcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 250 GSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
.+.|..|+|+|.++...+ ..-....|+.||++|+++++|..|++|+...
T Consensus 520 TSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 520 TSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred ecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 899999999999776665 4445668899999999999999999999854
No 118
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.92 E-value=2.3e-23 Score=182.19 Aligned_cols=202 Identities=17% Similarity=0.208 Sum_probs=162.4
Q ss_pred EeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEECCCCc------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEE
Q 014590 146 EEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLR------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARV 217 (422)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 217 (422)
-.+.++... ..+++.|.|..++ |+.|..|++||+.+.. ..+.....|.+..+.++..+..+++.+.....++
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 344555444 4499999999999 9999999999998754 2356667888889999999998888888889999
Q ss_pred EeCCCcceee------------eeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------------cce
Q 014590 218 FDMYSRKCSQ------------IIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------------TGI 270 (422)
Q Consensus 218 wd~~~~~~~~------------~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------------~~v 270 (422)
+|-...+... ..++|...++|.+|+|. +.|++++.||++++||+.+.+.. ..+
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 9964333222 23689999999999986 78999999999999999765433 788
Q ss_pred EeEEEecCCCEEEEEeCCCeEEEEECCCCe--e-eeeeccCCC--ceeeeeeEecCCCEEEEEecCCeEEEEECCCC-ce
Q 014590 271 KTLCYNPCSRLVFAGTTAGYASCWDLRTMK--S-LWETRISPN--VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG-EV 344 (422)
Q Consensus 271 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~-~~~~~~~~~--~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~-~~ 344 (422)
+.++|+|||+.+|+|+.||.|.+|+..... + ...-..|.. .|+||. ||++|++|++-+.|+++++||++.. ++
T Consensus 321 tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~-FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 321 TSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSIS-FSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred eeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEE-eccccchhhhccCCCceeeeeccccccc
Confidence 999999999999999999999999986432 2 223346765 899999 9999999999999999999999864 34
Q ss_pred EEEe
Q 014590 345 LSRC 348 (422)
Q Consensus 345 ~~~~ 348 (422)
+...
T Consensus 400 L~~~ 403 (641)
T KOG0772|consen 400 LNVR 403 (641)
T ss_pred hhhh
Confidence 4443
No 119
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.9e-22 Score=165.92 Aligned_cols=219 Identities=18% Similarity=0.243 Sum_probs=180.8
Q ss_pred eccccceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceee
Q 014590 109 KAHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVF 186 (422)
Q Consensus 109 ~~H~~~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~ 186 (422)
-.|..++.+++|.|. .+++|+.||.|+.+|+.+++....-.+...+.++..++....++ |+.|++|++||..+.....
T Consensus 51 ~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~ 130 (323)
T KOG1036|consen 51 FKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG 130 (323)
T ss_pred eecCCceeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc
Confidence 459999999999766 99999999999999999998887777778888899998666666 9999999999998755443
Q ss_pred ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee--cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCC
Q 014590 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~ 263 (422)
....+. .+.++...++.|++|+.+..|.+||+++.....+.+ ...-.+.++++.|+ .=++.++-||.|.+=.+..
T Consensus 131 ~~d~~k--kVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~ 208 (323)
T KOG1036|consen 131 TFDQGK--KVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDD 208 (323)
T ss_pred ccccCc--eEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCC
Confidence 333333 578888889999999999999999998765433221 23456889999986 5677788999987755544
Q ss_pred Cccc--------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 264 DQRL--------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 264 ~~~~--------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
.+.. .+|++++|+|-...+++|+.||.|.+||+.+.+.+..+...+..|.+++ |+.+|.
T Consensus 209 s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~sls-fs~dG~ 287 (323)
T KOG1036|consen 209 SEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLS-FSMDGS 287 (323)
T ss_pred chHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEE-eccCCC
Confidence 3111 8999999999999999999999999999999999988888878899999 999999
Q ss_pred EEEEEec
Q 014590 324 TLVVGGI 330 (422)
Q Consensus 324 ~l~s~~~ 330 (422)
.||.++.
T Consensus 288 ~LAia~s 294 (323)
T KOG1036|consen 288 LLAIASS 294 (323)
T ss_pred eEEEEec
Confidence 9999873
No 120
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=2.8e-23 Score=189.97 Aligned_cols=260 Identities=16% Similarity=0.191 Sum_probs=188.4
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCc----eee--ecCCCceeeeEE--Ee-eeCCeEEEecCCCeEEEEeCCC-
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLR----SVF--PSREGTFMKGLC--MR-YFDPEAVVGCEDGTARVFDMYS- 222 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~----~~~--~~~~~~~~~~~~--~~-~~~~~l~~~~~d~~i~iwd~~~- 222 (422)
....++..++...++......+++|.+.... ... .........+.. |. ...+.|++++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~ 120 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKS 120 (839)
T ss_pred ccceEeecCCcceeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCcc
Confidence 3455666777777776666677777654322 111 111121111111 22 2344599999999999999976
Q ss_pred --cceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEec-CCCEEEEEeCCCe
Q 014590 223 --RKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNP-CSRLVFAGTTAGY 290 (422)
Q Consensus 223 --~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~-~~~~l~~g~~dg~ 290 (422)
.+.+..|..|...+++++|++- +++++|+.||+|++||++..+.. ..|..+.|+| .+.+++++...|.
T Consensus 121 ~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~ 200 (839)
T KOG0269|consen 121 IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGY 200 (839)
T ss_pred ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCce
Confidence 5567788999999999999964 89999999999999999987766 7899999998 5678999999999
Q ss_pred EEEEECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE-----------EEeeecCCcc-cc
Q 014590 291 ASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL-----------SRCVMDIGSA-SS 357 (422)
Q Consensus 291 i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-----------~~~~~~~~~~-~~ 357 (422)
+.+||++. .++...+..|.++|.|+. |+|++.+|||||.|+.|+|||+.+++.. ..++-.+... .+
T Consensus 201 lqlWDlRqp~r~~~k~~AH~GpV~c~n-whPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hL 279 (839)
T KOG0269|consen 201 LQLWDLRQPDRCEKKLTAHNGPVLCLN-WHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHL 279 (839)
T ss_pred EEEeeccCchhHHHHhhcccCceEEEe-ecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchh
Confidence 99999995 466778899999999999 9999999999999999999998754322 2222222222 22
Q ss_pred cCC--CCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec---CEEEEEEeCCCeEEEEEcc
Q 014590 358 SSN--KVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 358 ~~~--s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~~~l~s~s~Dg~i~iW~~~ 416 (422)
++. -.|..|.+|+... +.........|+..++.++|+ ...+.+++.||+|..-.++
T Consensus 280 Atcsmv~dtsV~VWDvrR---PYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~k 340 (839)
T KOG0269|consen 280 ATCSMVVDTSVHVWDVRR---PYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFK 340 (839)
T ss_pred hhhhccccceEEEEeecc---ccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhh
Confidence 222 2355666655433 333344456799999999993 5789999999988654443
No 121
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=2.9e-22 Score=164.37 Aligned_cols=236 Identities=14% Similarity=0.192 Sum_probs=175.8
Q ss_pred CceeeEEEecC-CCeEE-EecCCeEEEEECCCC-cee---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce
Q 014590 152 NAASLVDFDFD-ESKIV-GLIGTRICIWRRNGL-RSV---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC 225 (422)
Q Consensus 152 ~~~~~~~~~~~-~~~l~-~~~~~~i~~w~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 225 (422)
..+..++|||. ...++ ++.|++|++|+++.. ... ...+.+. +-.++|+.++..+++|+.|+.+++||+.+++
T Consensus 28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~P-vL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q- 105 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGP-VLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ- 105 (347)
T ss_pred cchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCC-eEEEEEccCCceEEeeccCCceEEEEccCCC-
Confidence 34566999994 44453 899999999999873 322 2333443 3467777788889999999999999999995
Q ss_pred eeeeecCCccEEEEEecCC---CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 226 SQIIRMHCAPVTSLSLSED---QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 226 ~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
+..+..|.++|.++.|-++ ..|++||.|++|+.||.+....+ ..+.++.. -...++++..+..|.+|++
T Consensus 106 ~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv--~~pm~vVata~r~i~vynL 183 (347)
T KOG0647|consen 106 VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV--LYPMAVVATAERHIAVYNL 183 (347)
T ss_pred eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc--cCceeEEEecCCcEEEEEc
Confidence 4556789999999999865 58999999999999999987766 56666554 4457888888999999999
Q ss_pred CCCeeeeeec--cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC--ceEEEeeecCCcccccCCCCCCeEEeeecc
Q 014590 297 RTMKSLWETR--ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG--EVLSRCVMDIGSASSSSNKVSGVIERNEGR 372 (422)
Q Consensus 297 ~~~~~~~~~~--~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~--~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~ 372 (422)
+++....... .-+-.+.|+++| ++....+.|+.+|.+-|..+..+ +.-.+|+.|...- +.++.|
T Consensus 184 ~n~~te~k~~~SpLk~Q~R~va~f-~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~-----~~~~~V------ 251 (347)
T KOG0647|consen 184 ENPPTEFKRIESPLKWQTRCVACF-QDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTN-----SVNDDV------ 251 (347)
T ss_pred CCCcchhhhhcCcccceeeEEEEE-ecCCceEeeeecceEEEEecCCCCccCceeEEEeccCC-----CCCCce------
Confidence 8654332211 122457888844 66666699999999999988876 5556777776511 011112
Q ss_pred ccCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccCCC
Q 014590 373 RLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.+|++|+|+ ...|+|+|.||+..+||-+...
T Consensus 252 ----------------YaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~ 284 (347)
T KOG0647|consen 252 ----------------YAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART 284 (347)
T ss_pred ----------------EEecceEeecccceEEEecCCceEEEecchhhh
Confidence 378999995 5789999999999999976543
No 122
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.91 E-value=5.6e-21 Score=171.36 Aligned_cols=246 Identities=11% Similarity=0.087 Sum_probs=184.1
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eE-EEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-E-ecCCeEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICI 176 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~~ 176 (422)
+..+..+.+|.. +.+++| +++ .+ ++++.++.|++||..+++.+..+..+.....++++|+++.++ + ..++.+++
T Consensus 21 ~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~ 99 (300)
T TIGR03866 21 LEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTV 99 (300)
T ss_pred CceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEE
Confidence 345667776654 677888 566 54 677889999999999998888777666666789999999876 3 45799999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCC-eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE-EEcCC
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG-TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSL 253 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~-s~~~d 253 (422)
||+.+.+.+.....+.....+++.+++..+++++.++ .+.+||..+++....+.. ......++|+|+ +.++ ++..+
T Consensus 100 ~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~ 178 (300)
T TIGR03866 100 IDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIG 178 (300)
T ss_pred EECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCC
Confidence 9998876543332233334577778888888877764 577889988877655443 234577899987 5564 44569
Q ss_pred CcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEE-eCCCeEEEEECCCCeeeeeeccCCCceeeeeeE
Q 014590 254 GSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRTMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 254 g~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 318 (422)
+.|++||+.+++.+ .....++|+|++++++++ ..++.+.+||+++++.+..+. +...+.+++ |
T Consensus 179 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~-~ 256 (300)
T TIGR03866 179 GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLA-F 256 (300)
T ss_pred CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEE-E
Confidence 99999999987654 123468899999986554 456789999999888775553 345688998 9
Q ss_pred ecCCCEEEEE-ecCCeEEEEECCCCceEEEeeec
Q 014590 319 QNDTSTLVVG-GIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 319 s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
+|+|++|+++ +.+|.|++||+.+++++.++..+
T Consensus 257 ~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 257 TPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 9999999886 46899999999999999988754
No 123
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=5e-23 Score=184.87 Aligned_cols=303 Identities=18% Similarity=0.198 Sum_probs=212.8
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC--eEEEeeeCCC-ceeeEEE-ecCCCeEE-EecCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPN-AASLVDF-DFDESKIV-GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~-~~~~~~~-~~~~~~l~-~~~~~~i~~ 176 (422)
.+..++.|.+.|..++. .++ .|+|+|.|-+|++|+...+ -++.++..|. .+.++++ .++...++ |+-|+.|.+
T Consensus 65 ~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~Ifl 144 (735)
T KOG0308|consen 65 YIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFL 144 (735)
T ss_pred hhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEE
Confidence 36678999999999988 455 9999999999999999876 5666676654 4566887 55666666 889999999
Q ss_pred EECCCCce--e-------eec-CCCceeeeEE--EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC
Q 014590 177 WRRNGLRS--V-------FPS-REGTFMKGLC--MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED 244 (422)
Q Consensus 177 w~~~~~~~--~-------~~~-~~~~~~~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 244 (422)
||++++.. + ... ..|+...+.+ +...+..+++|+..+.+++||.++++.+..+++|+..|..+..+++
T Consensus 145 WDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dD 224 (735)
T KOG0308|consen 145 WDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDD 224 (735)
T ss_pred EEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCC
Confidence 99997632 1 111 1144433444 4444446999999999999999999999999999999999999976
Q ss_pred -CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee
Q 014590 245 -QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 245 -~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
..++++|.||+|++||+...+++ ..|.++..+|+-..+++|+.||.|..=|+++......+-....+|..+.
T Consensus 225 Gt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~ 304 (735)
T KOG0308|consen 225 GTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLH 304 (735)
T ss_pred CCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhh
Confidence 89999999999999999988877 6799999999999999999999999999987433222323345677776
Q ss_pred eEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe
Q 014590 317 HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV 396 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~ 396 (422)
.+...+-+-+++.|+.|+-|..+- ...+........ .+.+...-...... ++ ....+++ .+|..-+.
T Consensus 305 -~~~~~~~~WvtTtds~I~rW~~~~---~~~l~~s~~~~~---~~T~~~~~~~~~~~--tp--~~vi~Gg--~ai~k~~m 371 (735)
T KOG0308|consen 305 -LHEHDNSVWVTTTDSSIKRWKLEP---DIALSVSGDLDF---FSTDSNNHSCDLTN--TP--DSVIPGG--AAIKKHAM 371 (735)
T ss_pred -hccccCCceeeeccccceecCCcc---ccccccCCCCCc---ccccCCCccccccC--CC--ceeccCc--hhhhhhhh
Confidence 554445557788899999997652 222211111000 11111110000000 00 0001111 22333333
Q ss_pred --cCEEEEEEeCCCeEEEEEccCCC
Q 014590 397 --GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 397 --~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
|.++++|-..+|.+.+||+-..+
T Consensus 372 L~dkRhVlTkDa~gnv~lwDIl~~~ 396 (735)
T KOG0308|consen 372 LNDKRHVLTKDAKGNVALWDILACV 396 (735)
T ss_pred hcCcceEeeecCCCCEEEEEeeeee
Confidence 67899999999999999986543
No 124
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=3.6e-23 Score=173.59 Aligned_cols=242 Identities=13% Similarity=0.158 Sum_probs=181.9
Q ss_pred eeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 103 IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
.++.+|++|.+.|..+++..+.++|++.|++|+.|.++. ..++++.+.....-+.-+..+. ..++.+..|.+||....
T Consensus 100 ~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~~tilg~s~~~gIdh~~~~~-~FaTcGe~i~IWD~~R~ 177 (433)
T KOG0268|consen 100 ECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPLHTILGKSVYLGIDHHRKNS-VFATCGEQIDIWDEQRD 177 (433)
T ss_pred hhhheeecccCceeeEEecccceEEecCCcceeeeeccC-Ccceeeeccccccccccccccc-cccccCceeeecccccC
Confidence 467899999999999999889999999999999999875 4666666543332233332222 33556678999998765
Q ss_pred ceeeecCC-CceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEE
Q 014590 183 RSVFPSRE-GTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAIS 259 (422)
Q Consensus 183 ~~~~~~~~-~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iw 259 (422)
.++....- ...+..+.+++.... |+++..|+.|.+||++++++++.+.. ...-+.++|+|+ -.|++|+.|..++.+
T Consensus 178 ~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~ 256 (433)
T KOG0268|consen 178 NPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTY 256 (433)
T ss_pred CccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-eccccceecCccccceeeccccccceeh
Confidence 54322211 122233444444443 78888999999999999998876642 345678999997 678899999999999
Q ss_pred eCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-CCCceeeeeeEecCCCEEEEEec
Q 014590 260 GLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-SPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 260 d~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
|++..... +.|..++|||.|+-+++|+.|.+|+||..+.+...-.+.. .-..|.|+. ||.|.+++++||.
T Consensus 257 DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk-~S~Dskyi~SGSd 335 (433)
T KOG0268|consen 257 DMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVK-YSMDSKYIISGSD 335 (433)
T ss_pred hhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEE-EeccccEEEecCC
Confidence 99876654 8899999999999999999999999999987655433321 125699999 9999999999999
Q ss_pred CCeEEEEECCCCceEEEe
Q 014590 331 DGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~ 348 (422)
|+.|++|.....+.+..+
T Consensus 336 d~nvRlWka~Aseklgv~ 353 (433)
T KOG0268|consen 336 DGNVRLWKAKASEKLGVI 353 (433)
T ss_pred CcceeeeecchhhhcCCC
Confidence 999999987655444433
No 125
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.90 E-value=2.8e-22 Score=179.77 Aligned_cols=277 Identities=16% Similarity=0.204 Sum_probs=197.3
Q ss_pred eEEeeccccceeE--EEec--CC---eEEEEecCCeEEEEEcCCCeEE------EeeeCCCceee-EEEecCCCeEE-Ee
Q 014590 105 IDQWKAHSVGVDQ--CRMK--RG---LILTGVGDKVMRLWSLEGYKCV------EEYSLPNAASL-VDFDFDESKIV-GL 169 (422)
Q Consensus 105 ~~~l~~H~~~v~~--v~~~--~~---~l~s~~~dg~v~iwd~~~~~~~------~~~~~~~~~~~-~~~~~~~~~l~-~~ 169 (422)
+.....|.-++.- +.|+ ++ .|+.+..||.|.++|....+.. ..+..|..... +.+.|-...|+ ++
T Consensus 40 ~~s~~~~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsas 119 (720)
T KOG0321|consen 40 ITSYANDGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSAS 119 (720)
T ss_pred ccccccCCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEcc
Confidence 3444555556655 5662 22 8999999999999998653222 33444555444 88888555666 89
Q ss_pred cCCeEEEEECCCCce----eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc--------------------
Q 014590 170 IGTRICIWRRNGLRS----VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-------------------- 224 (422)
Q Consensus 170 ~~~~i~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~-------------------- 224 (422)
.|.++++||+++... ++.+|.+.+ ...|+..+++. +++|+.||.|.|||++-..
T Consensus 120 GDsT~r~Wdvk~s~l~G~~~~~GH~~Sv-kS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~pt 198 (720)
T KOG0321|consen 120 GDSTIRPWDVKTSRLVGGRLNLGHTGSV-KSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPT 198 (720)
T ss_pred CCceeeeeeeccceeecceeeccccccc-chhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCC
Confidence 999999999998764 355666554 35666666666 9999999999999985322
Q ss_pred ee-------eeeecCCcc----EEEEEecCCCEEEEEcC-CCcEEEEeCCCCccc------------------cceEeEE
Q 014590 225 CS-------QIIRMHCAP----VTSLSLSEDQLIISGSS-LGSIAISGLSSDQRL------------------TGIKTLC 274 (422)
Q Consensus 225 ~~-------~~~~~~~~~----v~~l~~~~~~~l~s~~~-dg~i~iwd~~~~~~~------------------~~v~~~~ 274 (422)
+. ..-..+... |+.+.|-++..|++++. |+.|++||++..... ..+.++.
T Consensus 199 pskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~ 278 (720)
T KOG0321|consen 199 PSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLI 278 (720)
T ss_pred CCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEE
Confidence 00 001123333 44555545588998887 999999999986654 5678888
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCC--eeeeeeccCCCc-eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTM--KSLWETRISPNV-VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~~-v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
....|.++++.+.|+.|++|++.+. .++..+.++... .+--...+|++.++++|+.|...++|.+.+.+.--.+
T Consensus 279 lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~--- 355 (720)
T KOG0321|consen 279 LDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPAL--- 355 (720)
T ss_pred ecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhh---
Confidence 8888999999999999999999853 345555554421 2211236899999999999999999998754432111
Q ss_pred CCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe---cCEEEEEEeCCCeEEEEEccC
Q 014590 352 IGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 352 ~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
..+|...|++++| +-.-++|+++|.++++|++..
T Consensus 356 --------------------------------l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 356 --------------------------------LLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred --------------------------------hhCcceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 2467789999999 346688889999999999854
No 126
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=3.6e-22 Score=171.87 Aligned_cols=222 Identities=18% Similarity=0.298 Sum_probs=168.2
Q ss_pred CCCeEE-EecCCeEEEEECCCCcee-----ee---------------cCCCceeeeEEEee---eCCeEEEecCCCeEEE
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSV-----FP---------------SREGTFMKGLCMRY---FDPEAVVGCEDGTARV 217 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~-----~~---------------~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~i 217 (422)
.|++++ |+.+..|.|||+.=...+ +. ...+|...+..+.. +.+.|++|+.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 356787 999999999997632111 10 01123322233333 3344999999999999
Q ss_pred EeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEeC
Q 014590 218 FDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGTT 287 (422)
Q Consensus 218 wd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~~ 287 (422)
||+.++++..++..|.+.|.++.|+|. ..+++|+.|+++.+.|.+..... +.|..++|.|.. ..+++++.
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecC
Confidence 999999999999999999999999985 79999999999999999964433 899999999855 57788889
Q ss_pred CCeEEEEECCC-CeeeeeeccCCCceeeeeeEec-CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCe
Q 014590 288 AGYASCWDLRT-MKSLWETRISPNVVYSLQHLQN-DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGV 365 (422)
Q Consensus 288 dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~ 365 (422)
||+|+-+|+|. ++++++++.|.+.|.+|+ +++ ...++++++.|+.|++|++......... .|.-
T Consensus 351 dG~v~~~D~R~~~~~vwt~~AHd~~ISgl~-~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~-~~~~------------ 416 (463)
T KOG0270|consen 351 DGTVYYFDIRNPGKPVWTLKAHDDEISGLS-VNIQTPGLLSTASTDKVVKLWKFDVDSPKSVK-EHSF------------ 416 (463)
T ss_pred CceEEeeecCCCCCceeEEEeccCCcceEE-ecCCCCcceeeccccceEEEEeecCCCCcccc-cccc------------
Confidence 99999999996 499999999999999999 544 4458999999999999998743321111 1100
Q ss_pred EEeeeccccCCCcccccCCCCCCCCeEEEEec---CEEEEEEeCCCeEEEEEccCC
Q 014590 366 IERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 366 i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.-+...|.+++ .-.++.||..+.++|||+...
T Consensus 417 ---------------------~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~ 451 (463)
T KOG0270|consen 417 ---------------------KLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN 451 (463)
T ss_pred ---------------------cccceeecccCCCcceEEEecCccceEEEeecccC
Confidence 00234455553 467889999999999998764
No 127
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.90 E-value=5.9e-22 Score=162.01 Aligned_cols=196 Identities=17% Similarity=0.172 Sum_probs=159.4
Q ss_pred CCeEEEecCCCeEEEEeCCCcc------------ee---eeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCc
Q 014590 203 DPEAVVGCEDGTARVFDMYSRK------------CS---QIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQ 265 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~------------~~---~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~~ 265 (422)
+.++++|+.||.|.+||++... ++ ..-.+|.-.|.++.|-| | .+|.+++.|.++++||..+.+
T Consensus 56 grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ 135 (397)
T KOG4283|consen 56 GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQ 135 (397)
T ss_pred ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccce
Confidence 4459999999999999997532 10 11135777899999997 4 899999999999999999887
Q ss_pred cc------cceEeEEEecC---CCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEEecCCeEE
Q 014590 266 RL------TGIKTLCYNPC---SRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVGGIDGVLR 335 (422)
Q Consensus 266 ~~------~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~ 335 (422)
.. +.|.+-+++|- ..++|+|..+-.|++.|+.+|..-.++.+|.+.|.++. |+|... .|++|+.||.|+
T Consensus 136 ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~-Wsp~~e~vLatgsaDg~ir 214 (397)
T KOG4283|consen 136 EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE-WSPSSEWVLATGSADGAIR 214 (397)
T ss_pred eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE-eccCceeEEEecCCCceEE
Confidence 66 77888788773 45888999999999999999999999999999999999 888776 578999999999
Q ss_pred EEECCCC-ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEE
Q 014590 336 VLDQNTG-EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 336 vwd~~~~-~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~i 412 (422)
+||++.. -++..+..|... .+. ..+...+|.+.|++++| ++.++++++.|..+++
T Consensus 215 lWDiRrasgcf~~lD~hn~k---------------------~~p-~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 215 LWDIRRASGCFRVLDQHNTK---------------------RPP-ILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEEeecccceeEEeecccCc---------------------cCc-cccccccccceeeeeeecccchhhhhccCccceEE
Confidence 9999865 577777666530 000 11123568899999999 7999999999999999
Q ss_pred EEccCCCCC
Q 014590 413 WKFNYSDKY 421 (422)
Q Consensus 413 W~~~~~~~~ 421 (422)
|+...++..
T Consensus 273 wn~~~G~nt 281 (397)
T KOG4283|consen 273 WNMESGRNT 281 (397)
T ss_pred eecccCccc
Confidence 999887654
No 128
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.89 E-value=6.4e-22 Score=166.93 Aligned_cols=211 Identities=18% Similarity=0.215 Sum_probs=153.7
Q ss_pred EeeccccceeEEEe---cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 107 QWKAHSVGVDQCRM---KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 107 ~l~~H~~~v~~v~~---~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
...+|.+.+.-+.. .+. +.++=+..|.|.||++.. .++.+..+... +..+....
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~--~l~~l~~~~~~--~~~s~~~P------------------ 203 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAP--HLNALSEPGLE--VKDSEFRP------------------ 203 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchh--hhhhhcCcccc--ccccccCc------------------
Confidence 34568888888766 233 788888899999999853 22222211100 00000000
Q ss_pred ceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcce---eeeeecCCccEEEEEecCC--CEEEEEcCCCcE
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKC---SQIIRMHCAPVTSLSLSED--QLIISGSSLGSI 256 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i 256 (422)
...+..+. .....++|++.... +++|..-+.|++|...+|.- ...+.+|+..|-.++|+|. +.|++||.||+|
T Consensus 204 l~t~~ghk-~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 204 LFTFNGHK-GEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred eEEecccC-ccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 00111222 12234555543332 88888888999999888752 2345679999999999985 899999999999
Q ss_pred EEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCC---CeeeeeeccCCCceeeeeeEecCC-C
Q 014590 257 AISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT---MKSLWETRISPNVVYSLQHLQNDT-S 323 (422)
Q Consensus 257 ~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~---~~~~~~~~~~~~~v~~l~~~s~~~-~ 323 (422)
+|||++.+... +.|+.+.|+....+||+|+.||+++|||+++ ++++.+++-|..+|+++. |+|.. .
T Consensus 283 rIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsie-W~p~e~s 361 (440)
T KOG0302|consen 283 RIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIE-WHPHEDS 361 (440)
T ss_pred EEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEE-eccccCc
Confidence 99999998433 8899999999888999999999999999985 678899999999999999 77765 5
Q ss_pred EEEEEecCCeEEEEECCC
Q 014590 324 TLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~ 341 (422)
.|++++.|.+|.+||+.-
T Consensus 362 ~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLSV 379 (440)
T ss_pred eEEeccCCCcEEEEEeec
Confidence 788899999999999863
No 129
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=8.4e-22 Score=156.96 Aligned_cols=231 Identities=15% Similarity=0.202 Sum_probs=178.3
Q ss_pred eeccccceeEEEec--CCeEEEEecCCeEEEEEcCCC---eEEEeeeCCCceee-EEEec--CCCeEE-EecCCeEEEEE
Q 014590 108 WKAHSVGVDQCRMK--RGLILTGVGDKVMRLWSLEGY---KCVEEYSLPNAASL-VDFDF--DESKIV-GLIGTRICIWR 178 (422)
Q Consensus 108 l~~H~~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~-~~~~~--~~~~l~-~~~~~~i~~w~ 178 (422)
-.+|.+.|..+..+ +..|||++.|++|+|+...+. +.+.++.+|.+..- ++|.. -|..|+ ++.||.|.+|.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 35699999988774 449999999999999998764 56788888877655 77765 788899 89999999999
Q ss_pred CCCCce-e---eecCCCceeeeEEEeee--CCeEEEecCCCeEEEEeCCCc---ceeeeeecCCccEEEEEecCC-----
Q 014590 179 RNGLRS-V---FPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSR---KCSQIIRMHCAPVTSLSLSED----- 244 (422)
Q Consensus 179 ~~~~~~-~---~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~----- 244 (422)
-++++- . +..|... +..+++.+. +..|++++.||.|.+.+.++. ...+....|.-.|++++|.|.
T Consensus 87 e~~g~w~k~~e~~~h~~S-VNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~ 165 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSAS-VNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGS 165 (299)
T ss_pred cCCCchhhhhhhhhhccc-ceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcc
Confidence 988852 1 2333332 234444443 334999999999999987654 233455789999999999863
Q ss_pred ----------CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCC----CEEEEEeCCCeEEEEECCCCee
Q 014590 245 ----------QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCS----RLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 245 ----------~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~----~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
..|++|+.|..|++|+..+++-. ..|+.++|.|.- .+||++++||++.||..+....
T Consensus 166 ~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e 245 (299)
T KOG1332|consen 166 LVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYE 245 (299)
T ss_pred ccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccC
Confidence 35999999999999999886443 789999999864 5899999999999998763211
Q ss_pred ---eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 302 ---LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 302 ---~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
...+......++.+. ||+.|+.|+.++.|+.|.+|.-.
T Consensus 246 ~wk~tll~~f~~~~w~vS-WS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 246 PWKKTLLEEFPDVVWRVS-WSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cccccccccCCcceEEEE-EeccccEEEEecCCcEEEEEEeC
Confidence 112233457799999 99999999999999999999643
No 130
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=3.3e-20 Score=146.29 Aligned_cols=234 Identities=15% Similarity=0.218 Sum_probs=179.9
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEE-----EeeeCCCc-eeeEEEecCC----CeEE--Ee
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCV-----EEYSLPNA-ASLVDFDFDE----SKIV--GL 169 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~-~~~~~~~~~~----~~l~--~~ 169 (422)
+.+.-+.|.+.|.|.+| ++| ++++|+.|++|++--++...+. .+|..|.+ +.-++|-.+. ..|+ +.
T Consensus 81 ~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ga 160 (350)
T KOG0641|consen 81 LCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGA 160 (350)
T ss_pred EeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCC
Confidence 44556779999999999 566 9999999999999766543221 33444444 3447776542 3344 45
Q ss_pred cCCeEEEEECCCCc--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--C-----CccEEEEE
Q 014590 170 IGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--H-----CAPVTSLS 240 (422)
Q Consensus 170 ~~~~i~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~-----~~~v~~l~ 240 (422)
.|..|++-|-..++ ..+.++.+++.... .+.+-.+++|+.|.+|++||++-..++.++.. | ...|.+++
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilaly--swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~ 238 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILALY--SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVA 238 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEEE--EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEE
Confidence 56777777776665 44667777754332 33455699999999999999998888777631 2 35789999
Q ss_pred ecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC----eeeeeeccC
Q 014590 241 LSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM----KSLWETRIS 308 (422)
Q Consensus 241 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~~ 308 (422)
..|. +++++|-.|....+||++.++.+ ..|.++.|+|...++++++.|..|++-|+... -++.....|
T Consensus 239 vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~eh 318 (350)
T KOG0641|consen 239 VDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEH 318 (350)
T ss_pred ECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEec
Confidence 9986 89999999999999999999887 88999999999999999999999999998731 233445568
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
...+..+. |+|..-.+++.+.|.++.+|-+.
T Consensus 319 kdk~i~~r-wh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 319 KDKAIQCR-WHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cCceEEEE-ecCccceeeeccCcceEEEeccC
Confidence 88888888 89999899999999999999753
No 131
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.6e-23 Score=190.24 Aligned_cols=220 Identities=23% Similarity=0.290 Sum_probs=185.6
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEEEecCCeEEEEECCCC
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIVGLIGTRICIWRRNGL 182 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~w~~~~~ 182 (422)
+.+..|...|.++.. ..+ .+++|+.|..+-+|.+..--.+..|.+|+.. .++.|+++.
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E------------------- 82 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSE------------------- 82 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcch-------------------
Confidence 456679999999887 333 9999999999999998776666666665432 334444433
Q ss_pred ceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeC
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~ 261 (422)
..+++|+.+|+|++||++.++.++++.+|...+.++.|+|- .++++|+.|+.+++||+
T Consensus 83 ---------------------~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~ 141 (825)
T KOG0267|consen 83 ---------------------RLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDI 141 (825)
T ss_pred ---------------------hhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhh
Confidence 33788999999999999999999999999999999999996 78899999999999999
Q ss_pred CCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeE
Q 014590 262 SSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVL 334 (422)
Q Consensus 262 ~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v 334 (422)
+...+. ..+..+.|+|+|++++.|++|..++|||+..|+...+|..|++.+.++. |+|..-++++|+.|++|
T Consensus 142 Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle-~hp~e~Lla~Gs~d~tv 220 (825)
T KOG0267|consen 142 RKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLE-FHPLEVLLAPGSSDRTV 220 (825)
T ss_pred hccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccc-cCchhhhhccCCCCcee
Confidence 955554 5688999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EEEECCCCceEEEeeecCCcccccCCCCCCeE
Q 014590 335 RVLDQNTGEVLSRCVMDIGSASSSSNKVSGVI 366 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i 366 (422)
++||+++.+.+.........+....+.+++..
T Consensus 221 ~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~ 252 (825)
T KOG0267|consen 221 RFWDLETFEVISSGKPETDGVRSLAFNPDGKI 252 (825)
T ss_pred eeeccceeEEeeccCCccCCceeeeecCCcee
Confidence 99999988888777666665666666666654
No 132
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=7.9e-21 Score=171.73 Aligned_cols=230 Identities=17% Similarity=0.272 Sum_probs=192.7
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCc---eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR---SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS 226 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 226 (422)
+..+.++|++.+.+.|+ +-.+|.|.+|++...- .++.++.+..+..++|+ .+..|++.+.+|.|.-||+.+++..
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~ 103 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQK 103 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCcee
Confidence 56678899999999998 8889999999998864 44666666666777777 5666999999999999999999999
Q ss_pred eeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 227 QIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
..+....+.|++++.+|. ..++.|+.||.+..++...+... +.+.+++|+|++..+++|+.||.|++||.
T Consensus 104 ~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~ 183 (691)
T KOG2048|consen 104 YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDV 183 (691)
T ss_pred EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEc
Confidence 999999999999999986 78999999998888887766654 89999999999999999999999999999
Q ss_pred CCCeeeee-------ecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEe
Q 014590 297 RTMKSLWE-------TRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIER 368 (422)
Q Consensus 297 ~~~~~~~~-------~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~ 368 (422)
.++..+.. +.. ...-|+++.+. . ...|++|..-|+|.+||...|..++.+..
T Consensus 184 ~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-r-d~tI~sgDS~G~V~FWd~~~gTLiqS~~~------------------ 243 (691)
T KOG2048|consen 184 KSGQTLHIITMQLDRLSKREPTIVWSVLFL-R-DSTIASGDSAGTVTFWDSIFGTLIQSHSC------------------ 243 (691)
T ss_pred CCCceEEEeeecccccccCCceEEEEEEEe-e-cCcEEEecCCceEEEEcccCcchhhhhhh------------------
Confidence 98876651 111 23457888844 3 34799999999999999999998888755
Q ss_pred eeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 369 NEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
|...|.+++. ++.+++++|.|+.|.-+......
T Consensus 244 ------------------h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 244 ------------------HDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred ------------------hhcceeEEEEcCCCCeEEEccCCCceEEEEecCCc
Confidence 4458999988 46899999999999988877654
No 133
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.89 E-value=2.2e-21 Score=184.43 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=179.0
Q ss_pred CCCceeeeEEEeeeCCeEEEec--CCCeEEEEeCCC------------cceeeeeecCCccEEEEEecCC-CEEEEEcCC
Q 014590 189 REGTFMKGLCMRYFDPEAVVGC--EDGTARVFDMYS------------RKCSQIIRMHCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~------------~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
|.+..+..+.+.+++..+++|+ .|+.++||+.+. .+.+.++..|.+.|+|+.|+|| .+||+|+.|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 3333444555666666699999 899999998642 2245566789999999999987 899999999
Q ss_pred CcEEEEeCCCC----------ccc---------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC
Q 014590 254 GSIAISGLSSD----------QRL---------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 254 g~i~iwd~~~~----------~~~---------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
+.|.+|..... ... ..|..++|+|++.++++++.|++|.+||..+.+.+..+.+|
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc
Confidence 99999998730 000 88999999999999999999999999999999999999999
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCc------ccccCCCCCCeEEeeec-cc--------
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGS------ASSSSNKVSGVIERNEG-RR-------- 373 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~------~~~~~~s~d~~i~~~~~-~~-------- 373 (422)
.+.|..+. |+|-|+|||+-+.|++|+||.+.+....+.+..+.+. ..-.++|+||......- ..
T Consensus 171 ~s~VKGvs-~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~I 249 (942)
T KOG0973|consen 171 QSLVKGVS-WDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAI 249 (942)
T ss_pred cccccceE-ECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEE
Confidence 99999999 9999999999999999999998777677766655442 25578999997642100 00
Q ss_pred cCCC-cccccCCCCCCCCeEEEEec-------CE------------EEEEEeCCCeEEEEEccCCCC
Q 014590 374 LSAG-CCIDRIPKTIRPPITCLAVG-------MK------------KVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 374 ~~~~-~~~~~~~~~h~~~v~~i~~~-------~~------------~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
+..+ -......-+|..++.++.|+ .+ .+++||.|++|.||.......
T Consensus 250 ieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RP 316 (942)
T KOG0973|consen 250 IERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRP 316 (942)
T ss_pred EecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCc
Confidence 0000 01122346799999999992 12 688999999999999865543
No 134
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.88 E-value=6.8e-22 Score=159.23 Aligned_cols=237 Identities=14% Similarity=0.167 Sum_probs=181.5
Q ss_pred ceeeEEeeccccceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce--eeEEEecCCCeEEEecCCeEEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA--SLVDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
+.+...|++|.+.|+++.|. +++|.+|..-|.|++|++.+......+..+... ..+..-|++....-+.|..+.+|+
T Consensus 4 PdP~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ 83 (323)
T KOG0322|consen 4 PDPFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWT 83 (323)
T ss_pred CCCeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEE
Confidence 35677899999999999995 569999999999999999998877777744333 235555664444477778888887
Q ss_pred CCCCc------------------------ee---ee-------------------------cCCCceeeeEEEeee---C
Q 014590 179 RNGLR------------------------SV---FP-------------------------SREGTFMKGLCMRYF---D 203 (422)
Q Consensus 179 ~~~~~------------------------~~---~~-------------------------~~~~~~~~~~~~~~~---~ 203 (422)
+.... .. .. ...+....++|.... +
T Consensus 84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~ 163 (323)
T KOG0322|consen 84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG 163 (323)
T ss_pred ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence 64310 00 00 000111223343311 1
Q ss_pred C--eEEEecCCCeEEEEeCCCcce----------eeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCC--ccc-
Q 014590 204 P--EAVVGCEDGTARVFDMYSRKC----------SQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD--QRL- 267 (422)
Q Consensus 204 ~--~l~~~~~d~~i~iwd~~~~~~----------~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~--~~~- 267 (422)
. .+++|.++|.+.+||+.++.. ......|..+|.++.+.+. +.=++|+.+..+..|++... ...
T Consensus 164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence 2 288999999999999998733 3334568899999999864 56678888888999988643 222
Q ss_pred --------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 268 --------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 268 --------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
..|..+.+-||++.+|+++.|+.|+||+.++++++..++.|.+.|++++ |+|+...+|+++.|+.|.+|++
T Consensus 244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vA-fspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVA-FSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEE-eCCCCchhhhccCCceEEeeec
Confidence 7788899999999999999999999999999999999999999999999 9999999999999999999986
No 135
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.88 E-value=2.3e-21 Score=167.57 Aligned_cols=196 Identities=16% Similarity=0.234 Sum_probs=156.1
Q ss_pred eEEeeccccceeEEEec---CCeEEEEecCCeEEEEEcCCCeE-------EEeeeCCCceeeEEEecCCCeEEEecCCeE
Q 014590 105 IDQWKAHSVGVDQCRMK---RGLILTGVGDKVMRLWSLEGYKC-------VEEYSLPNAASLVDFDFDESKIVGLIGTRI 174 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 174 (422)
-..|.||.+.=+.++|+ .|+|++|+.|++|++||+..... ...+.+|..
T Consensus 170 dl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~--------------------- 228 (422)
T KOG0264|consen 170 DLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHED--------------------- 228 (422)
T ss_pred ceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCc---------------------
Confidence 34799999988889994 45999999999999999875322 122222221
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCC--CcceeeeeecCCccEEEEEecCC--CEEEE
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMY--SRKCSQIIRMHCAPVTSLSLSED--QLIIS 249 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~~~--~~l~s 249 (422)
.+..+++.+.... +++++.|+.+.|||++ +.++.+...+|.+.|+|++|+|- ..||+
T Consensus 229 ------------------~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT 290 (422)
T KOG0264|consen 229 ------------------VVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILAT 290 (422)
T ss_pred ------------------ceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEe
Confidence 2223444444433 8899999999999999 55677788899999999999973 79999
Q ss_pred EcCCCcEEEEeCCCCccc--------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCC--------------eeeeeec
Q 014590 250 GSSLGSIAISGLSSDQRL--------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTM--------------KSLWETR 306 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~--------------~~~~~~~ 306 (422)
||.|++|.+||+|+.... ..|..+.|+|.. ..||+++.|+.+.+||+..- +++..-.
T Consensus 291 ~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~Hg 370 (422)
T KOG0264|consen 291 GSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHG 370 (422)
T ss_pred ccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEec
Confidence 999999999999987665 899999999965 67888899999999998741 2446677
Q ss_pred cCCCceeeeeeEecCCC-EEEEEecCCeEEEEECC
Q 014590 307 ISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 307 ~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~ 340 (422)
||...|..+. |+|+.. .|++.++|+.+.||...
T Consensus 371 GH~~kV~Dfs-Wnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 371 GHTAKVSDFS-WNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred Cccccccccc-CCCCCCeEEEEecCCceEEEeecc
Confidence 8999999999 888876 57888999999999875
No 136
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1.5e-20 Score=175.46 Aligned_cols=231 Identities=16% Similarity=0.200 Sum_probs=187.8
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 230 (422)
.+-..+++.++|..|+ ++.||.|++|+.......-.........+.++...+..+++|+.+++|.+|.+.+++.-..+.
T Consensus 14 ~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~ 93 (933)
T KOG1274|consen 14 GGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILA 93 (933)
T ss_pred CceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceee
Confidence 4456699999999988 999999999987665311111111233456666777789999999999999998887665666
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
..+-++.+++++-+ .+++.||.|-.|++-+..+.... .+|.++.|+|.+++||+.+.||.|++||+.++.+.
T Consensus 94 Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 94 RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILS 173 (933)
T ss_pred eeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhh
Confidence 66788999999854 89999999999999998876655 99999999999999999999999999999998776
Q ss_pred eeeccC--------CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeecccc
Q 014590 303 WETRIS--------PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRL 374 (422)
Q Consensus 303 ~~~~~~--------~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~ 374 (422)
.++.+- ...+..++ |+|+|..++..+.|+.|++|+..+++....+....
T Consensus 174 ~tl~~v~k~n~~~~s~i~~~~a-W~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~---------------------- 230 (933)
T KOG1274|consen 174 KTLTGVDKDNEFILSRICTRLA-WHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKL---------------------- 230 (933)
T ss_pred hhcccCCccccccccceeeeee-ecCCCCeEEeeccCCeEEEEccCCceeheeecccc----------------------
Confidence 665431 23445666 99999989999999999999999998888886532
Q ss_pred CCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 375 SAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 375 ~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
|...+.+++| +|+||++++.||.|.|||+++
T Consensus 231 ------------~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 231 ------------SSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred ------------cccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 3345888999 699999999999999999985
No 137
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=5.6e-22 Score=163.79 Aligned_cols=181 Identities=14% Similarity=0.182 Sum_probs=154.7
Q ss_pred eeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC----CCccc--------
Q 014590 201 YFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS----SDQRL-------- 267 (422)
Q Consensus 201 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~----~~~~~-------- 267 (422)
...|.+.+++.|.+.+||.+++|.++.++.+|.+.|++++|++. .++++++.|++..||... ..+..
T Consensus 158 ~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsE 237 (481)
T KOG0300|consen 158 STQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSE 237 (481)
T ss_pred cCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCch
Confidence 34455889999999999999999999999999999999999976 789999999999999721 11100
Q ss_pred -----------------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce
Q 014590 268 -----------------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV 312 (422)
Q Consensus 268 -----------------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v 312 (422)
..|.+..|-..|+.+++++.|.+..+||+++++++..+.+|....
T Consensus 238 eE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~EL 317 (481)
T KOG0300|consen 238 EEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSEL 317 (481)
T ss_pred hhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhc
Confidence 556677787889999999999999999999999999999999999
Q ss_pred eeeeeEecCCCEEEEEecCCeEEEEECCCCc-eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCe
Q 014590 313 YSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE-VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPI 391 (422)
Q Consensus 313 ~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v 391 (422)
+.++ -+|..+++++++.|-+.++||++..- .+..| ++|...|
T Consensus 318 tHcs-tHptQrLVvTsSrDtTFRLWDFReaI~sV~VF------------------------------------QGHtdtV 360 (481)
T KOG0300|consen 318 THCS-THPTQRLVVTSSRDTTFRLWDFREAIQSVAVF------------------------------------QGHTDTV 360 (481)
T ss_pred cccc-cCCcceEEEEeccCceeEeccchhhcceeeee------------------------------------cccccce
Confidence 9988 88999999999999999999997321 22333 5577799
Q ss_pred EEEEec-CEEEEEEeCCCeEEEEEccCC
Q 014590 392 TCLAVG-MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 392 ~~i~~~-~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+++.|+ +..+++|++|.+|+|||+..-
T Consensus 361 TS~vF~~dd~vVSgSDDrTvKvWdLrNM 388 (481)
T KOG0300|consen 361 TSVVFNTDDRVVSGSDDRTVKVWDLRNM 388 (481)
T ss_pred eEEEEecCCceeecCCCceEEEeeeccc
Confidence 999994 888999999999999998753
No 138
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=3.9e-22 Score=182.61 Aligned_cols=225 Identities=15% Similarity=0.232 Sum_probs=177.1
Q ss_pred EEEe---cCCeEEEEecCCeEEEEEcCC---CeEEEeeeCCCc-eeeEEEecCCCe-EE-EecCCeEEEEECCCCcee--
Q 014590 117 QCRM---KRGLILTGVGDKVMRLWSLEG---YKCVEEYSLPNA-ASLVDFDFDESK-IV-GLIGTRICIWRRNGLRSV-- 185 (422)
Q Consensus 117 ~v~~---~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~~~~-~~~~~~~~~~~~-l~-~~~~~~i~~w~~~~~~~~-- 185 (422)
.|.| .+++|||++..|.|.+||+.. .+.+..|..|+. +..+.|++.... |+ |+.||.|++||++..+..
T Consensus 92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t 171 (839)
T KOG0269|consen 92 DVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKST 171 (839)
T ss_pred hcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccc
Confidence 3555 244999999999999999987 566667777755 455999986554 45 999999999999876633
Q ss_pred eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC
Q 014590 186 FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~ 262 (422)
+.. ....+..+.|++..++ ++++...|.+++||++.. ++...+.+|.++|.|+.|+|+ .+|++|+.|++|+|||..
T Consensus 172 ~~~-nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 172 FRS-NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred ccc-cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 344 3444455666665444 999999999999999865 467888999999999999998 899999999999999998
Q ss_pred CCccc--------cceEeEEEecCCCE-EEEEe--CCCeEEEEECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 263 SDQRL--------TGIKTLCYNPCSRL-VFAGT--TAGYASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 263 ~~~~~--------~~v~~~~~~~~~~~-l~~g~--~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+++.- .++.++.|-|+..+ |++++ .|-.|+|||++. .-+..++..|...++.++|-+.|...+.+++.
T Consensus 251 ~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sK 330 (839)
T KOG0269|consen 251 DSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSK 330 (839)
T ss_pred CCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecC
Confidence 65543 89999999998765 44444 477899999984 45677889999999999954545668999999
Q ss_pred CCeEEEEECCCC
Q 014590 331 DGVLRVLDQNTG 342 (422)
Q Consensus 331 dg~v~vwd~~~~ 342 (422)
||+|..-.++++
T Consensus 331 D~tv~qh~~kna 342 (839)
T KOG0269|consen 331 DGTVLQHLFKNA 342 (839)
T ss_pred ccHHHHhhhhcc
Confidence 998876655544
No 139
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.88 E-value=5.6e-21 Score=166.71 Aligned_cols=252 Identities=15% Similarity=0.235 Sum_probs=194.8
Q ss_pred CCeEEEEEcCCCeEEEeeeCC---CceeeEEEecCCCeEE--EecCCeEEEEECCCCc---eeeecCCCceeeeEEEeee
Q 014590 131 DKVMRLWSLEGYKCVEEYSLP---NAASLVDFDFDESKIV--GLIGTRICIWRRNGLR---SVFPSREGTFMKGLCMRYF 202 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (422)
...+++||+...+....+..+ .++..+.|+......+ .+.|..+.+|.-.+.. .+.....+....+++...+
T Consensus 11 gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~ 90 (673)
T KOG4378|consen 11 GDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQ 90 (673)
T ss_pred CCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhc
Confidence 347999999876666555543 2334455555554333 4567789999876652 3344444444445555556
Q ss_pred CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc--------cceEeE
Q 014590 203 DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL--------TGIKTL 273 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~ 273 (422)
+-++++|+..+.|+|||++...+.+.+++|...|+++.++ .|.++++++..|.|.+..+.++... ..|.-+
T Consensus 91 S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll 170 (673)
T KOG4378|consen 91 SLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLL 170 (673)
T ss_pred ceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEe
Confidence 6779999999999999999777888889999999999998 4589999999999999999887765 556789
Q ss_pred EEecCCCE-EEEEeCCCeEEEEECCCCeeeeee-ccCCCceeeeeeEecCC-CEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 274 CYNPCSRL-VFAGTTAGYASCWDLRTMKSLWET-RISPNVVYSLQHLQNDT-STLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 274 ~~~~~~~~-l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.|+|..+. |.+++.+|.|.+||+....++..+ ..|..+...++ |+|.. .+|++.+.|..|.+||..+.+....+..
T Consensus 171 ~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gic-fspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y 249 (673)
T KOG4378|consen 171 RYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGIC-FSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY 249 (673)
T ss_pred ecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcce-ecCCccceEEEecccceEEEeecccccccceeee
Confidence 99998765 557889999999999987776554 56888889998 77765 4788999999999999987666666544
Q ss_pred cCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 351 DIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 351 ~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
..+.++++| +|.+|+.|...|.|..||+...+.
T Consensus 250 -------------------------------------~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 250 -------------------------------------SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA 284 (673)
T ss_pred -------------------------------------cCCcceeeecCCceEEEeecCCceEEEEecccCCC
Confidence 246788999 689999999999999999986554
No 140
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.88 E-value=3.1e-21 Score=173.03 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=98.3
Q ss_pred eeEEeeccccceeEEEe---cCCeEEEEecCCeEEEEEcCCCeEEEe-----eeCCCc--eeeEEEecCCCeEE-EecCC
Q 014590 104 DIDQWKAHSVGVDQCRM---KRGLILTGVGDKVMRLWSLEGYKCVEE-----YSLPNA--ASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~---~~~~l~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~l~-~~~~~ 172 (422)
.+..|.+|.+.|+.+.| .|++|||||.|..|+||.+..|-.... ..++.. +.++.|+|...-|+ .+..|
T Consensus 71 ~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g 150 (1012)
T KOG1445|consen 71 DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHG 150 (1012)
T ss_pred ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCc
Confidence 45668899999999998 366999999999999999985422211 122333 35589999766665 88899
Q ss_pred eEEEEECCCCceeee-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-cceeeeeecCCc
Q 014590 173 RICIWRRNGLRSVFP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKCSQIIRMHCA 234 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~ 234 (422)
.+++||+.+.+..+. ......+....|..++..+++++.|+.|+|||.+. ++.++..++|.+
T Consensus 151 ~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~ 214 (1012)
T KOG1445|consen 151 SVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGG 214 (1012)
T ss_pred eEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCcccccccccc
Confidence 999999999886543 22344455677888899999999999999999875 456666666643
No 141
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.87 E-value=4.9e-20 Score=167.01 Aligned_cols=277 Identities=10% Similarity=0.068 Sum_probs=200.3
Q ss_pred eeEEeeccccceeEEEe-cCC----eEEEEecCCeEEEEEcCCCeE--EEeeeCCCceeeEEEecCCCeEE-EecCCeEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG----LILTGVGDKVMRLWSLEGYKC--VEEYSLPNAASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~----~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
....+.||.++|+|+.+ +.. +++||+.|+.|.+|.+..... +..+.+ ....++++........ .+.++.+.
T Consensus 46 i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g-~~~~~~cv~a~~~~~~~~~ad~~v~ 124 (764)
T KOG1063|consen 46 IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQG-HCKECVCVVARSSVMTCKAADGTVS 124 (764)
T ss_pred eEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecC-cceeEEEEEeeeeEEEeeccCceEE
Confidence 45678999999999999 432 799999999999999985444 444555 3556667665555554 47899999
Q ss_pred EEECCCCcee----eecCCCc-eeeeEEEeeeCCe--EEEecCCCeEEEEeCCCc--ceeeeeecCCccEEEEEec-CC-
Q 014590 176 IWRRNGLRSV----FPSREGT-FMKGLCMRYFDPE--AVVGCEDGTARVFDMYSR--KCSQIIRMHCAPVTSLSLS-ED- 244 (422)
Q Consensus 176 ~w~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~--l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~-~~- 244 (422)
+||.+..+.. +....+. ...+++..+..+. ++.|+.+..|.++.-... +.+..+.+|.+.|.+++|. ++
T Consensus 125 vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~ 204 (764)
T KOG1063|consen 125 VWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGG 204 (764)
T ss_pred EeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCC
Confidence 9999555411 1111111 1112222332222 778888888888876544 3567789999999999998 33
Q ss_pred --CEEEEEcCCCcEEEEeCCCCccc--------------------------------------cceEeEEEecCCCEEEE
Q 014590 245 --QLIISGSSLGSIAISGLSSDQRL--------------------------------------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 245 --~~l~s~~~dg~i~iwd~~~~~~~--------------------------------------~~v~~~~~~~~~~~l~~ 284 (422)
-+++++|.|..|++|.+.-+... ..|.++.|+|.+..|++
T Consensus 205 ~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLS 284 (764)
T KOG1063|consen 205 DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLS 284 (764)
T ss_pred CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhhee
Confidence 48999999999999987533300 78999999999999999
Q ss_pred EeCCCeEEEEECCCCe-------eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccc
Q 014590 285 GTTAGYASCWDLRTMK-------SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASS 357 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 357 (422)
++.|.++.+|...+.. .+..+.+..+.-++.. |+|++..+++-+..|..++|...... ..+..
T Consensus 285 ASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~l-w~~n~~~ii~~g~~Gg~hlWkt~d~~-~w~~~-------- 354 (764)
T KOG1063|consen 285 ASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGL-WSPNSNVIIAHGRTGGFHLWKTKDKT-FWTQE-------- 354 (764)
T ss_pred cccCcceEEEecCCccceEEEEEEeecccccccceeeEE-EcCCCCEEEEecccCcEEEEeccCcc-ceeec--------
Confidence 9999999999876542 1223333345567777 89999999999999999999832211 11111
Q ss_pred cCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEc
Q 014590 358 SSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 358 ~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~ 415 (422)
....+|...|..++|+ |.+|+|+|.|.+-|++-.
T Consensus 355 ------------------------~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~ 390 (764)
T KOG1063|consen 355 ------------------------PVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFAR 390 (764)
T ss_pred ------------------------cccccccccceeeeecCCCCEEEEeccccceeeecc
Confidence 1136788999999996 999999999999999754
No 142
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.87 E-value=2.8e-20 Score=154.49 Aligned_cols=270 Identities=14% Similarity=0.158 Sum_probs=195.6
Q ss_pred EEeeccccceeEEEec-----CC--eEEEEecCCeEEEEEcCCC---eEEEeeeCCC---ceeeEEEecCCCeEEEecCC
Q 014590 106 DQWKAHSVGVDQCRMK-----RG--LILTGVGDKVMRLWSLEGY---KCVEEYSLPN---AASLVDFDFDESKIVGLIGT 172 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~-----~~--~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~ 172 (422)
+..++|..+|..++|. +. .++|++. ..+.+|+.... ..++.+...+ ....++|+.|-
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~--------- 101 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDS--------- 101 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecC---------
Confidence 3456899999999993 22 6666665 47888876542 2333333221 11112222211
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEE
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
...++.+++|+.-|.|+|.|+.++++...+.+|...|+.+.++|. ++++++
T Consensus 102 ---------------------------~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~ 154 (385)
T KOG1034|consen 102 ---------------------------NTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSA 154 (385)
T ss_pred ---------------------------CCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEe
Confidence 112455888999999999999999999999999999999999997 699999
Q ss_pred cCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe------ee------------
Q 014590 251 SSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK------SL------------ 302 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~------~~------------ 302 (422)
|.|..|++||+++..++ ..|.++.|+++|.++++++.|..|++|++...+ ..
T Consensus 155 SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pf 234 (385)
T KOG1034|consen 155 SKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPF 234 (385)
T ss_pred cCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcC
Confidence 99999999999999887 889999999999999999999999999998321 00
Q ss_pred ----------eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC-CCCce-------------EEEeeecCC-----
Q 014590 303 ----------WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ-NTGEV-------------LSRCVMDIG----- 353 (422)
Q Consensus 303 ----------~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~-~~~~~-------------~~~~~~~~~----- 353 (422)
.+-..|...|-|+.|| |.++++-|-++.|..|.. +-++. +.++.....
T Consensus 235 pt~~~~fp~fst~diHrnyVDCvrw~---gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfi 311 (385)
T KOG1034|consen 235 PTPKTHFPDFSTTDIHRNYVDCVRWF---GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFI 311 (385)
T ss_pred CccccccccccccccccchHHHHHHH---hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEE
Confidence 0223466777777754 578999888999999986 21111 122222211
Q ss_pred -------cccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 354 -------SASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 354 -------~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
...++.|...|.+++|+....+++.........-...|...+| |+..|+...+|++|.-||.
T Consensus 312 rf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 312 RFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred EEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 1267889999999998887776653322222223457788888 8999999999999999985
No 143
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.87 E-value=2.7e-21 Score=168.88 Aligned_cols=228 Identities=16% Similarity=0.215 Sum_probs=182.7
Q ss_pred eeEEEecCCCeEEEecCCeEEEEECCCCcee-----eec-CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee--
Q 014590 155 SLVDFDFDESKIVGLIGTRICIWRRNGLRSV-----FPS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-- 226 (422)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-- 226 (422)
..++++...+++..+..|-|+|||+...... +.. ..+..+..+.+.+++..|++|++-.++.|||+....+.
T Consensus 423 cAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprik 502 (705)
T KOG0639|consen 423 CAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIK 502 (705)
T ss_pred EEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchh
Confidence 3378888888899999999999999765321 222 24566677778888889999999999999999765432
Q ss_pred eeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 227 QIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
..+....-....++.+|| +..+++..||.|.|||+.+...+ ..+.|+.+++||..|.+|+-|++|+.||+++
T Consensus 503 aeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlre 582 (705)
T KOG0639|consen 503 AELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLRE 582 (705)
T ss_pred hhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhh
Confidence 222222235677888998 88899999999999999987776 8899999999999999999999999999999
Q ss_pred CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCc
Q 014590 299 MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGC 378 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~ 378 (422)
++.+.... ....|.++. ..|++.+|+.|-+++.+-|-... +...+.+
T Consensus 583 grqlqqhd-F~SQIfSLg-~cP~~dWlavGMens~vevlh~s-kp~kyql------------------------------ 629 (705)
T KOG0639|consen 583 GRQLQQHD-FSSQIFSLG-YCPTGDWLAVGMENSNVEVLHTS-KPEKYQL------------------------------ 629 (705)
T ss_pred hhhhhhhh-hhhhheecc-cCCCccceeeecccCcEEEEecC-Cccceee------------------------------
Confidence 87765433 247799998 88999999999999988887654 3333333
Q ss_pred ccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCCC
Q 014590 379 CIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDKY 421 (422)
Q Consensus 379 ~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~~ 421 (422)
.-|.+.|.++.| .|+++++.|.|..+..|....+.+.
T Consensus 630 ------hlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasi 668 (705)
T KOG0639|consen 630 ------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 668 (705)
T ss_pred ------cccccEEEEEEecccCceeeecCchhhhhhccCccccce
Confidence 235678999999 6999999999999999999887654
No 144
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=4e-22 Score=181.16 Aligned_cols=178 Identities=19% Similarity=0.350 Sum_probs=160.2
Q ss_pred CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEE
Q 014590 203 DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLC 274 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~ 274 (422)
+..+++|+.|..+-+|.+.....+..+.+|..+|.++.|++. .++++|+.+|+|++||+..++.+ ..+.++.
T Consensus 40 ~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~ 119 (825)
T KOG0267|consen 40 SRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVD 119 (825)
T ss_pred ceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceee
Confidence 344899999999999998777777789999999999999976 78999999999999999988755 8899999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCc
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGS 354 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 354 (422)
|+|-+.+.+.|+.|+.+++||++...+...+.+|...|..+. |+|+|+++++|++|.+++|||...|+.+..|..|
T Consensus 120 f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~-lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~--- 195 (825)
T KOG0267|consen 120 FHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLR-LSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSH--- 195 (825)
T ss_pred eccceEEeccccccccceehhhhccCceeeecCCcceeEEEe-ecCCCceeeccCCcceeeeecccccccccccccc---
Confidence 999999999999999999999998889999999999999999 9999999999999999999999999999998664
Q ss_pred ccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccC
Q 014590 355 ASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 355 ~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.+.|.++.|+ .-++++||.|+++++||+++
T Consensus 196 ---------------------------------e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet 227 (825)
T KOG0267|consen 196 ---------------------------------EGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET 227 (825)
T ss_pred ---------------------------------cccccccccCchhhhhccCCCCceeeeeccce
Confidence 4477777784 56788999999999999884
No 145
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.86 E-value=9.2e-20 Score=150.63 Aligned_cols=192 Identities=17% Similarity=0.237 Sum_probs=161.6
Q ss_pred ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC---CEEEEEcCCCcEEEEeCCC
Q 014590 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg~i~iwd~~~ 263 (422)
.....|...+.++...++++++|+.|.+|+|||+++...+..+-.|.+.|+++.|.+. +.|++|+.||.|.+|+...
T Consensus 37 F~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~ 116 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS 116 (362)
T ss_pred ccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCC
Confidence 3445566668888889999999999999999999999999999999999999999965 4899999999999999988
Q ss_pred Cccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 264 DQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 264 ~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
-..+ ..|+.++++|.|++.++.+.|+.+++||+-+|+.-..++.... -+.+. |+|.|.+++.++.++ |-+
T Consensus 117 W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~-at~v~-w~~~Gd~F~v~~~~~-i~i 193 (362)
T KOG0294|consen 117 WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK-ATLVS-WSPQGDHFVVSGRNK-IDI 193 (362)
T ss_pred eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc-ceeeE-EcCCCCEEEEEeccE-EEE
Confidence 7665 7799999999999999999999999999998876655544322 23477 899999998888776 999
Q ss_pred EECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEc
Q 014590 337 LDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 337 wd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~ 415 (422)
|.+.+......+... ..+.|+.| ++..|++|++|+.|++||.
T Consensus 194 ~q~d~A~v~~~i~~~-------------------------------------~r~l~~~~l~~~~L~vG~d~~~i~~~D~ 236 (362)
T KOG0294|consen 194 YQLDNASVFREIENP-------------------------------------KRILCATFLDGSELLVGGDNEWISLKDT 236 (362)
T ss_pred EecccHhHhhhhhcc-------------------------------------ccceeeeecCCceEEEecCCceEEEecc
Confidence 999877666655331 25778888 7899999999999999998
Q ss_pred cCC
Q 014590 416 NYS 418 (422)
Q Consensus 416 ~~~ 418 (422)
+..
T Consensus 237 ds~ 239 (362)
T KOG0294|consen 237 DSD 239 (362)
T ss_pred CCC
Confidence 753
No 146
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4e-19 Score=170.65 Aligned_cols=319 Identities=15% Similarity=0.172 Sum_probs=208.8
Q ss_pred hhccccceeeEEeeccccceeEEEec--CC-eEEEEecCCeEEEEEcCC-------CeEEEeee-CCCceeeEEEecCCC
Q 014590 96 FALEEGRIDIDQWKAHSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEG-------YKCVEEYS-LPNAASLVDFDFDES 164 (422)
Q Consensus 96 ~~~~~~~~~~~~l~~H~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~-------~~~~~~~~-~~~~~~~~~~~~~~~ 164 (422)
..|...|..+..|..|...|..++.. ++ +++|||.||+|++||... .+...++. ....+..+.+.+.++
T Consensus 1032 ~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1032 PGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred CCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence 45788889999999999999999883 43 999999999999999864 23344454 455667789999999
Q ss_pred eEE-EecCCeEEEEECCCC--cee-----ee---cCCCceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeee-
Q 014590 165 KIV-GLIGTRICIWRRNGL--RSV-----FP---SREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIR- 230 (422)
Q Consensus 165 ~l~-~~~~~~i~~w~~~~~--~~~-----~~---~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~- 230 (422)
.++ ++.||.|.+.+++.. ... .. ...+..+...++... ++.++.+...+.|..||+++....++++
T Consensus 1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 998 999999999998762 111 11 112232222222222 1247788888999999998876655543
Q ss_pred -cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCC---CEEEEEe--CCCeEEEEE
Q 014590 231 -MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCS---RLVFAGT--TAGYASCWD 295 (422)
Q Consensus 231 -~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~---~~l~~g~--~dg~i~iwd 295 (422)
...+.|++++.+|. ++++.|+..|.+.+||++-+..+ .+++.+..+|-. ...++++ ..+.|.+|+
T Consensus 1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred CccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 33578999999987 89999999999999999988776 677888777643 3444444 477899999
Q ss_pred CCCCeeeeeeccC-----------------CCceeeee-eEecCCCEEEEEecCCeEEEEECCCCceE-EEeeecCCccc
Q 014590 296 LRTMKSLWETRIS-----------------PNVVYSLQ-HLQNDTSTLVVGGIDGVLRVLDQNTGEVL-SRCVMDIGSAS 356 (422)
Q Consensus 296 ~~~~~~~~~~~~~-----------------~~~v~~l~-~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~~~ 356 (422)
+.+|.....+-.. ...+..+. .+...+..+.+|+.|+.|+.||....+.. ..+.+......
T Consensus 1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~ 1351 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYS 1351 (1431)
T ss_pred cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCcccccc
Confidence 9988655544322 01111111 12233458899999999999998755433 22222211111
Q ss_pred ccCCCCCCeEE---------eeeccccC------CCccc----ccCCCCCCCCeEEEEe---cCEEEEEEeCCCeEEEEE
Q 014590 357 SSSNKVSGVIE---------RNEGRRLS------AGCCI----DRIPKTIRPPITCLAV---GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 357 ~~~~s~d~~i~---------~~~~~~~~------~~~~~----~~~~~~h~~~v~~i~~---~~~~l~s~s~Dg~i~iW~ 414 (422)
..+-+.+-.+. +....... +...+ ......|..+|+++++ +-.+|++++.||.|+||.
T Consensus 1352 ~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1352 TNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred ccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 11111111100 00000000 01111 1123458889999998 456999999999999995
No 147
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.85 E-value=6.7e-20 Score=154.84 Aligned_cols=175 Identities=18% Similarity=0.284 Sum_probs=146.6
Q ss_pred EEEecCCCeEEEEeCCC----------------cceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc
Q 014590 206 AVVGCEDGTARVFDMYS----------------RKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~----------------~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
.++=+..|.|+|||+.. .+++.++.+|.+.=..++|+|- ..+++|..-+.|++|...++.-.
T Consensus 168 ~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~ 247 (440)
T KOG0302|consen 168 CASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWK 247 (440)
T ss_pred eeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCcee
Confidence 56667889999999742 2366778899988899999984 67999999999999999887654
Q ss_pred ----------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCC---eeeeeeccCCCceeeeeeEecCCCEEEEEecCCe
Q 014590 268 ----------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTM---KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGV 333 (422)
Q Consensus 268 ----------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~ 333 (422)
..|..++|||.. ..+++++.||+|+|||++.+ .++. .+.|.+.|+.|. |+....+||+|+.||+
T Consensus 248 vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVIS-Wnr~~~lLasG~DdGt 325 (440)
T KOG0302|consen 248 VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVIS-WNRREPLLASGGDDGT 325 (440)
T ss_pred ecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEE-ccCCcceeeecCCCce
Confidence 778899999976 57889999999999999987 3343 378999999999 8888889999999999
Q ss_pred EEEEECCC---CceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec---CEEEEEEeCC
Q 014590 334 LRVLDQNT---GEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---MKKVVTTHNS 407 (422)
Q Consensus 334 v~vwd~~~---~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~~~l~s~s~D 407 (422)
++|||+++ ++++..|.. |..+|++|.|+ ...|+++|.|
T Consensus 326 ~~iwDLR~~~~~~pVA~fk~------------------------------------Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 326 LSIWDLRQFKSGQPVATFKY------------------------------------HKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred EEEEEhhhccCCCcceeEEe------------------------------------ccCCeeEEEeccccCceEEeccCC
Confidence 99999975 456666655 56699999994 7889999999
Q ss_pred CeEEEEEccCC
Q 014590 408 KYIRLWKFNYS 418 (422)
Q Consensus 408 g~i~iW~~~~~ 418 (422)
..|.+||+...
T Consensus 370 ~QitiWDlsvE 380 (440)
T KOG0302|consen 370 NQITIWDLSVE 380 (440)
T ss_pred CcEEEEEeecc
Confidence 99999998753
No 148
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=2e-19 Score=150.26 Aligned_cols=258 Identities=15% Similarity=0.187 Sum_probs=176.2
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEec--CCCeEE-EecCCeEEEEECCCCcee----eecCCCceee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDF--DESKIV-GLIGTRICIWRRNGLRSV----FPSREGTFMK 195 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~--~~~~l~-~~~~~~i~~w~~~~~~~~----~~~~~~~~~~ 195 (422)
.+|++-..|.|++||..+++.+..|+++.... -+.|.. .+..+. ++.||+|++||++..... +..+.+....
T Consensus 42 ~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~ 121 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFI 121 (376)
T ss_pred eEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcce
Confidence 68888889999999999999999999875543 377776 344455 999999999999876533 2333322322
Q ss_pred eEEEeeeCCeEEEecC----CCeEEEEeCCCcce-eeee-ecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc
Q 014590 196 GLCMRYFDPEAVVGCE----DGTARVFDMYSRKC-SQII-RMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~-~~~~-~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
.+.....+..+++|.. +-.|.+||++..+. +..+ ..|.+.|+++.|+|. +++++||.||-+.+||+.....-
T Consensus 122 ~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~Ee 201 (376)
T KOG1188|consen 122 CLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEE 201 (376)
T ss_pred EeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcch
Confidence 2333334444666643 56799999987765 4443 679999999999985 89999999999999999765432
Q ss_pred ----------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCC-------------CceeeeeeEecCCC
Q 014590 268 ----------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISP-------------NVVYSLQHLQNDTS 323 (422)
Q Consensus 268 ----------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~l~~~s~~~~ 323 (422)
..|.++.|..++ +.+.+-+..+...+|+++.+.+...+.... .-|.+. ...++.
T Consensus 202 DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~--~~~~~~ 279 (376)
T KOG1188|consen 202 DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH--SPGDKD 279 (376)
T ss_pred hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc--cCCCcc
Confidence 679999998777 458888888999999999877554443221 011111 112233
Q ss_pred EEEEEec-CCeEEEEECC---CCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--
Q 014590 324 TLVVGGI-DGVLRVLDQN---TGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG-- 397 (422)
Q Consensus 324 ~l~s~~~-dg~v~vwd~~---~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~-- 397 (422)
..+.++. -|...++-+. ++..... ...+.++|...|.++.|+
T Consensus 280 ~~~l~g~~~n~~~~~~~~~~~s~~~~~~--------------------------------~a~l~g~~~eiVR~i~~~~~ 327 (376)
T KOG1188|consen 280 TCALAGTDSNKGTIFPLVDTSSGSLLTE--------------------------------PAILQGGHEEIVRDILFDVK 327 (376)
T ss_pred eEEEeccccCceeEEEeeecccccccCc--------------------------------cccccCCcHHHHHHHhhhcc
Confidence 4444333 4444444322 1211111 122345577888898884
Q ss_pred CEEEEEEeCCCeEEEEEc
Q 014590 398 MKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 398 ~~~l~s~s~Dg~i~iW~~ 415 (422)
+.++.|||+||.+.+|..
T Consensus 328 ~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 328 NDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred cceeeccCCCceEEEEec
Confidence 789999999999999994
No 149
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.85 E-value=3.8e-19 Score=153.95 Aligned_cols=244 Identities=15% Similarity=0.184 Sum_probs=180.0
Q ss_pred eEEeeccccceeEEEec---C-CeEEEEecCCeEEEEEcCCCe----EEEeeeCC-CceeeEEEecCCC-eEE-EecCCe
Q 014590 105 IDQWKAHSVGVDQCRMK---R-GLILTGVGDKVMRLWSLEGYK----CVEEYSLP-NAASLVDFDFDES-KIV-GLIGTR 173 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~---~-~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~-~~~~~~~~~~~~~-~l~-~~~~~~ 173 (422)
....+-|.+.|++++|. + ..+|+|+.-|+|-+||+.+.+ -+..+..| ..+..+.|+|.+. .++ ++.||+
T Consensus 179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt 258 (498)
T KOG4328|consen 179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT 258 (498)
T ss_pred cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence 34567799999999993 2 289999999999999995322 23334444 3455699999543 344 899999
Q ss_pred EEEEECCCCc--eeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce-eeeeecCCccEEEEEecCC--CEE
Q 014590 174 ICIWRRNGLR--SVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQIIRMHCAPVTSLSLSED--QLI 247 (422)
Q Consensus 174 i~~w~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~--~~l 247 (422)
|+.-|+++.. .++... .......+.+....+.++.+..=|...+||.+++.. ...+..|...|.+++++|- .++
T Consensus 259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~l 338 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFL 338 (498)
T ss_pred eeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhe
Confidence 9999998865 222221 122223334444555577777777999999998754 6667788899999999985 799
Q ss_pred EEEcCCCcEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCCeEEEEECC----CCeeeeeeccCC---
Q 014590 248 ISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR----TMKSLWETRISP--- 309 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~----~~~~~~~~~~~~--- 309 (422)
++++.|++.+|||++..... ..|.+..|||++..|++.+.|..|+|||.. .-.+..++. |.
T Consensus 339 aT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t 417 (498)
T KOG4328|consen 339 ATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRT 417 (498)
T ss_pred eecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcc
Confidence 99999999999999863322 789999999999889999999999999983 333444433 22
Q ss_pred -C--ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 310 -N--VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 310 -~--~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
. ...... |.|+..++++|..-..|-|+|-..++.+..+..
T Consensus 418 ~RwlT~fKA~-W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~ 460 (498)
T KOG4328|consen 418 GRWLTPFKAA-WDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHD 460 (498)
T ss_pred cccccchhhe-eCCCccEEEEeccCcceeEEcCCCCEEeeeccC
Confidence 1 123344 899999999999999999999888877776643
No 150
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=7.5e-19 Score=145.29 Aligned_cols=268 Identities=11% Similarity=0.153 Sum_probs=189.0
Q ss_pred eeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCC
Q 014590 115 VDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSRE 190 (422)
Q Consensus 115 v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~ 190 (422)
-.|+.|+ -| +||+|..||.|.|||+.|...-+.+..|- .+.+++||+||+.|+ ++.|..|.+||+..+..+.+..-
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 6788994 55 99999999999999999988777777764 456699999999999 99999999999999886655555
Q ss_pred CceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeec--CCc----cEEEEEecC-CCEEEEEcCCCcEEEEeCC
Q 014590 191 GTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRM--HCA----PVTSLSLSE-DQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 191 ~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~----~v~~l~~~~-~~~l~s~~~dg~i~iwd~~ 262 (422)
...+....+.+.... .++.-.+..-.+.++..+ .+.+-. ..+ .-.+..|.+ ++++++|...|.+.++|..
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred cCccceeeeccccCCeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 555555555554433 333333333344444332 111110 011 112234554 4899999999999999999
Q ss_pred CCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-------e--eeeeecc--CCCceeeeeeEecCCC
Q 014590 263 SDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-------K--SLWETRI--SPNVVYSLQHLQNDTS 323 (422)
Q Consensus 263 ~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-------~--~~~~~~~--~~~~v~~l~~~s~~~~ 323 (422)
+.+++ ..|..+.++..|++++.-+.|..|+.|+++.- + +.++++. ....=.+++ |+.+|.
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~cc-fs~dge 262 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCC-FSGDGE 262 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhee-ecCCcc
Confidence 98877 67888999999999999999999999998731 1 1122221 111123444 999999
Q ss_pred EEEEEec-CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecC--EE
Q 014590 324 TLVVGGI-DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGM--KK 400 (422)
Q Consensus 324 ~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~--~~ 400 (422)
|++.|+. -..++||....|..++.+.+..+ .....+.|+. ..
T Consensus 263 Yv~a~s~~aHaLYIWE~~~GsLVKILhG~kg-----------------------------------E~l~DV~whp~rp~ 307 (405)
T KOG1273|consen 263 YVCAGSARAHALYIWEKSIGSLVKILHGTKG-----------------------------------EELLDVNWHPVRPI 307 (405)
T ss_pred EEEeccccceeEEEEecCCcceeeeecCCch-----------------------------------hheeecccccceee
Confidence 9988774 46799999999999999877543 2345566653 33
Q ss_pred EEEEeCCCeEEEEEccCCCCC
Q 014590 401 VVTTHNSKYIRLWKFNYSDKY 421 (422)
Q Consensus 401 l~s~s~Dg~i~iW~~~~~~~~ 421 (422)
+++- ..|.+.||.....+++
T Consensus 308 i~si-~sg~v~iw~~~~~enw 327 (405)
T KOG1273|consen 308 IASI-ASGVVYIWAVVQVENW 327 (405)
T ss_pred eeec-cCCceEEEEeecccch
Confidence 4444 7789999998877664
No 151
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.84 E-value=3.9e-19 Score=147.48 Aligned_cols=228 Identities=15% Similarity=0.143 Sum_probs=172.5
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCC--------------ceeeecCCCceeeeEEEee-------eCCeEEEecCCCe
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGL--------------RSVFPSREGTFMKGLCMRY-------FDPEAVVGCEDGT 214 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~--------------~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~d~~ 214 (422)
..|+|||..|+ -+.|..+.+|++... ...+.-..+..+...++-. ....+++.+.+..
T Consensus 55 ckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~P 134 (406)
T KOG2919|consen 55 CKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQP 134 (406)
T ss_pred ceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCc
Confidence 68999999998 888999999987421 1123444555555555432 2234888999999
Q ss_pred EEEEeCCCcceeeeeec--CCc---cEEEEEecCCCEEEEEcCCCcEEEEeC-CCCccc--------------cceEeEE
Q 014590 215 ARVFDMYSRKCSQIIRM--HCA---PVTSLSLSEDQLIISGSSLGSIAISGL-SSDQRL--------------TGIKTLC 274 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~--~~~---~v~~l~~~~~~~l~s~~~dg~i~iwd~-~~~~~~--------------~~v~~~~ 274 (422)
|++||.-+|+....+.+ |.+ .-.+++|+||..-+.++....|++||+ +.|..- +-+.+++
T Consensus 135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a 214 (406)
T KOG2919|consen 135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFA 214 (406)
T ss_pred eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeee
Confidence 99999999998777653 333 336899999844444567789999999 555432 7788999
Q ss_pred EecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec-CCeEEEEECCC-CceEEEeeec
Q 014590 275 YNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI-DGVLRVLDQNT-GEVLSRCVMD 351 (422)
Q Consensus 275 ~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~~-~~~~~~~~~~ 351 (422)
|+|-. ..+++|+....+-||.-..+.++..+.+|.+.|+.+. |.++|+.|.+|+. |-.|..||++. +.++..+..|
T Consensus 215 ~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~-~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rh 293 (406)
T KOG2919|consen 215 FSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQ-WCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERH 293 (406)
T ss_pred ccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEE-eccCcCeecccccCCCeEEEEeehhccchhhhhhhh
Confidence 99965 4899999999999999888999999999999999999 9999999999985 77899999984 4456666554
Q ss_pred CCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCC-eEEEEecCEEEEEEeCCCeEEEEEccC
Q 014590 352 IGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPP-ITCLAVGMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 352 ~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~-v~~i~~~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
... -... ...++-+++.|++|+.||.|++||++.
T Consensus 294 v~~--------------------------------TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 294 VGD--------------------------------TNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred ccC--------------------------------ccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 330 0011 123333689999999999999999987
No 152
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=4.1e-19 Score=153.87 Aligned_cols=234 Identities=15% Similarity=0.165 Sum_probs=183.8
Q ss_pred eEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEe--eeCCC--ceeeEEEecCCCeEE-EecCCeEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEE--YSLPN--AASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~--~~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
++.+.--.-+|.+.+| ++| .+++++.-.....||+.+.+..+. ..+.+ ......+++++++|+ .+..|.|.+
T Consensus 250 lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~l 329 (514)
T KOG2055|consen 250 LQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHL 329 (514)
T ss_pred heeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEe
Confidence 3344444567888888 566 799999999999999998766533 22333 344588999999998 999999999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccE--EEEEecCC-CEEEEEcCC
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV--TSLSLSED-QLIISGSSL 253 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~l~~~~~-~~l~s~~~d 253 (422)
....+++.+........+..+++..++..|++.+.+|.|.+||+++..+++.+.. .+.| ++++.+++ .++++|+..
T Consensus 330 LhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~ 408 (514)
T KOG2055|consen 330 LHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYLATGSDS 408 (514)
T ss_pred ehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceEEeccCc
Confidence 9999888665544455566788888888899999999999999999999888864 3444 45565655 899999999
Q ss_pred CcEEEEeCCCC------ccc-------cceEeEEEecCCCEEEEEeC--CCeEEEEECCCCeeeeeeccCC---Cceeee
Q 014590 254 GSIAISGLSSD------QRL-------TGIKTLCYNPCSRLVFAGTT--AGYASCWDLRTMKSLWETRISP---NVVYSL 315 (422)
Q Consensus 254 g~i~iwd~~~~------~~~-------~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~~~---~~v~~l 315 (422)
|.|.|||..+- +.+ ..|+++.|+||++.||.++. +..+++-.+.+......+.... +.|+|+
T Consensus 409 GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~ 488 (514)
T KOG2055|consen 409 GIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCM 488 (514)
T ss_pred ceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEE
Confidence 99999996542 222 88999999999999998874 6679998888766555554332 568999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECC
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+ |||.+.+||.|..+|.|.+|.+.
T Consensus 489 a-FSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 489 A-FSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred E-ecCCCceEEeecCCCceeeEeec
Confidence 9 99999999999999999999874
No 153
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.84 E-value=6.1e-20 Score=158.23 Aligned_cols=196 Identities=16% Similarity=0.219 Sum_probs=157.1
Q ss_pred EeeccccceeEEEec---CCeEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCC-CeEE-EecCCeEEEEECC
Q 014590 107 QWKAHSVGVDQCRMK---RGLILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDE-SKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~-~~~~~~i~~w~~~ 180 (422)
.-.||+++|.++++. .+.|||||.|.+|++||+.+|++..++..+ ..+..++|+|.. ..|+ |+.|+++.+.|.+
T Consensus 238 ~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 238 SASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred ccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence 346899999999995 339999999999999999999999999965 456679999954 4555 9999999999998
Q ss_pred CCcee--eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC--CEEEEEcCCC
Q 014590 181 GLRSV--FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED--QLIISGSSLG 254 (422)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg 254 (422)
..... .-...+. +..+.|.++.+. ++++..||+|+-+|++.. +++.++++|.++|.++++++. +++++++.|+
T Consensus 318 ~~~~s~~~wk~~g~-VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~ 396 (463)
T KOG0270|consen 318 DPSNSGKEWKFDGE-VEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDK 396 (463)
T ss_pred CccccCceEEeccc-eEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccc
Confidence 53321 1112222 346777777776 888899999999999875 899999999999999999965 7999999999
Q ss_pred cEEEEeCCCCccc---------cceEeEEEecCCC-EEEEEeCCCeEEEEECCCCeeee
Q 014590 255 SIAISGLSSDQRL---------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
.+++|++...... +...|.++.|+-. .++.|+..+.+++||+.+...+.
T Consensus 397 ~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 397 VVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred eEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 9999998754442 6677778877654 56778888889999998876654
No 154
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=3.5e-20 Score=177.12 Aligned_cols=254 Identities=19% Similarity=0.232 Sum_probs=193.1
Q ss_pred ecCCeEEEEEcCC--C----eEEEeeeCCCceeeEEEecCCCe----EE-EecCCeEEEEECCCC---c--ee---eecC
Q 014590 129 VGDKVMRLWSLEG--Y----KCVEEYSLPNAASLVDFDFDESK----IV-GLIGTRICIWRRNGL---R--SV---FPSR 189 (422)
Q Consensus 129 ~~dg~v~iwd~~~--~----~~~~~~~~~~~~~~~~~~~~~~~----l~-~~~~~~i~~w~~~~~---~--~~---~~~~ 189 (422)
+.+.++-||.+.. . +.+..+.......-++|.+.+.. |+ |..||.|-+||.... . .+ ...|
T Consensus 36 st~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h 115 (1049)
T KOG0307|consen 36 STSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKH 115 (1049)
T ss_pred ccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhccc
Confidence 3455666665532 2 23444444455566889887766 66 788999999998652 1 22 4556
Q ss_pred CCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeee--ecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCC
Q 014590 190 EGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQII--RMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~ 264 (422)
.|++. .+.++.+.+ .|++|+.||.|.|||+..-+.-.+. ....+.|.+++|+.. +.|++++.+|.+.+||++..
T Consensus 116 ~G~V~-gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~ 194 (1049)
T KOG0307|consen 116 TGPVL-GLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK 194 (1049)
T ss_pred CCcee-eeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCC
Confidence 66654 377777766 5999999999999999765433333 224578999999854 78999999999999999988
Q ss_pred ccc---------cceEeEEEecCC-CEEEEEeCCC---eEEEEECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 265 QRL---------TGIKTLCYNPCS-RLVFAGTTAG---YASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 265 ~~~---------~~v~~~~~~~~~-~~l~~g~~dg---~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+.+ ..+..++|+|+. ..+++++.|. .|.+||+|. ..+++++++|...|.++.|...|..+|++++.
T Consensus 195 ~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgk 274 (1049)
T KOG0307|consen 195 KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGK 274 (1049)
T ss_pred CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccC
Confidence 766 447789999987 4566666543 589999984 56778889999999999955555589999999
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe---cCEEEEEEeCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---GMKKVVTTHNS 407 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~~~~l~s~s~D 407 (422)
|+.|.+|+..+|+.+..+.... ..+..+.| +...++.++-|
T Consensus 275 D~~ii~wN~~tgEvl~~~p~~~------------------------------------nW~fdv~w~pr~P~~~A~asfd 318 (1049)
T KOG0307|consen 275 DNRIICWNPNTGEVLGELPAQG------------------------------------NWCFDVQWCPRNPSVMAAASFD 318 (1049)
T ss_pred CCCeeEecCCCceEeeecCCCC------------------------------------cceeeeeecCCCcchhhhheec
Confidence 9999999999999999986632 46788888 56789999999
Q ss_pred CeEEEEEccCCC
Q 014590 408 KYIRLWKFNYSD 419 (422)
Q Consensus 408 g~i~iW~~~~~~ 419 (422)
|.|.|+.+....
T Consensus 319 gkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 319 GKISIYSLQGTD 330 (1049)
T ss_pred cceeeeeeecCC
Confidence 999999987543
No 155
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.84 E-value=3.6e-19 Score=160.02 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=168.3
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEe--eeCCC-ceeeEEEecCCCeEE--EecCCeEEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEE--YSLPN-AASLVDFDFDESKIV--GLIGTRICIW 177 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~--~~~~~~i~~w 177 (422)
++....|..+|..+.+ +.. .|++++.|.++++||+++++++.. +.+|. .+..++|.+.+..++ |+.||.|.+|
T Consensus 93 lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illW 172 (720)
T KOG0321|consen 93 LKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLW 172 (720)
T ss_pred hcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEE
Confidence 4567789999999999 533 999999999999999999988866 66664 456699999776654 8999999999
Q ss_pred ECCCCc---------eeeec--------------------CCCceeeeEEEee--eCCeEEEecC-CCeEEEEeCCCcce
Q 014590 178 RRNGLR---------SVFPS--------------------REGTFMKGLCMRY--FDPEAVVGCE-DGTARVFDMYSRKC 225 (422)
Q Consensus 178 ~~~~~~---------~~~~~--------------------~~~~~~~~~~~~~--~~~~l~~~~~-d~~i~iwd~~~~~~ 225 (422)
|+.-.. ..... ..+.+...+.+.. +...|++++. |+.|++||++....
T Consensus 173 D~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~ 252 (720)
T KOG0321|consen 173 DCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYT 252 (720)
T ss_pred EEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccc
Confidence 975211 00111 1111222222333 3344888887 99999999986543
Q ss_pred ee------e--eecC---CccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc-----------cceEeEEEecCCCEE
Q 014590 226 SQ------I--IRMH---CAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLV 282 (422)
Q Consensus 226 ~~------~--~~~~---~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l 282 (422)
.. . +..| .-.+.++.... +.++.+.+.|+.|++||+.+.... ..-..-..+|++.++
T Consensus 253 ~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l 332 (720)
T KOG0321|consen 253 AYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSL 332 (720)
T ss_pred ccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceE
Confidence 22 1 2223 22455666653 456666666999999999865433 112223457999999
Q ss_pred EEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 283 FAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 283 ~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
++|+.|...++|.+.+. .....+.+|...|++++|....-.-++++++|-.+++|++..+
T Consensus 333 ~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 333 LSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred eccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 99999999999999864 4456678999999999943333345788899999999998654
No 156
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-19 Score=158.26 Aligned_cols=198 Identities=16% Similarity=0.223 Sum_probs=166.8
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCce--eeecCCCceeeeEEE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRS--VFPSREGTFMKGLCM 199 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~ 199 (422)
|+++|+..+.|+|||+....+.+.++.|. .+..+.+.....+|+ ++..|.|.+-.+.++.. .+....+..+..+.+
T Consensus 93 y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~y 172 (673)
T KOG4378|consen 93 YEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRY 172 (673)
T ss_pred eeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeec
Confidence 99999999999999999655556666664 345588899999999 88889999999988764 356666777777777
Q ss_pred eeeCCe-EEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc------cc
Q 014590 200 RYFDPE-AVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL------TG 269 (422)
Q Consensus 200 ~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~------~~ 269 (422)
+++... |.+++.+|.|.+||+....++.. ...|..+...++|+|. .+|++.+.|..|.+||++..... .+
T Consensus 173 s~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~P 252 (673)
T KOG4378|consen 173 SPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHP 252 (673)
T ss_pred ccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCC
Confidence 777766 78899999999999976666544 3679999999999985 68999999999999999876655 88
Q ss_pred eEeEEEecCCCEEEEEeCCCeEEEEECCC-CeeeeeeccCCCceeeeeeEecCC
Q 014590 270 IKTLCYNPCSRLVFAGTTAGYASCWDLRT-MKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
...++|+++|.+|++|+..|.|..||++. ..++..+..|...|++++ |-|..
T Consensus 253 lstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~va-fq~s~ 305 (673)
T KOG4378|consen 253 LSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVA-FQPSP 305 (673)
T ss_pred cceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEE-eeecc
Confidence 99999999999999999999999999995 567888999999999999 76553
No 157
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=4.5e-20 Score=160.84 Aligned_cols=281 Identities=12% Similarity=0.139 Sum_probs=213.2
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee--EEEec--CCCeEE-EecCCeEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL--VDFDF--DESKIV-GLIGTRIC 175 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~--~~~~l~-~~~~~~i~ 175 (422)
.....|.+|.+.|..|.| ..| .|+|||.|..|.+||+..++....|...+...+ ..|-| +...++ ++.||+++
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr 212 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVR 212 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCcee
Confidence 345678999999999999 455 999999999999999999998888876433222 44555 223344 88999999
Q ss_pred EEECCCCc-----eeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeee---ecCCc---cEEEEEecC
Q 014590 176 IWRRNGLR-----SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQII---RMHCA---PVTSLSLSE 243 (422)
Q Consensus 176 ~w~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~---~v~~l~~~~ 243 (422)
+=.+.... ..+..+.+++ ..+++.++.+. +.+++.|+.+.-+|++++.+...+ ..+.. ...+++.+|
T Consensus 213 ~s~i~~t~~~e~t~rl~~h~g~v-hklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P 291 (559)
T KOG1334|consen 213 VSEILETGYVENTKRLAPHEGPV-HKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDP 291 (559)
T ss_pred eeeeccccceecceecccccCcc-ceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCC
Confidence 87664322 2244555554 56778888877 999999999999999887654333 22233 457788887
Q ss_pred C--CEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC--C-
Q 014590 244 D--QLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT--M- 299 (422)
Q Consensus 244 ~--~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--~- 299 (422)
- +.+++|+.|..+++||.+.-... ..|++++|+.++.-++++..|-.|+++.-.. |
T Consensus 292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 4 68999999999999998753221 7899999998888888888888899995432 2
Q ss_pred ---------eee-eeeccCC--CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEE
Q 014590 300 ---------KSL-WETRISP--NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIE 367 (422)
Q Consensus 300 ---------~~~-~~~~~~~--~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 367 (422)
..+ ..+++|. ..|.++-||-|...++++|+.-|.|.||+-.+++.++-+.+...
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~-------------- 437 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH-------------- 437 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc--------------
Confidence 112 2377886 45788889999999999999999999999999988877765322
Q ss_pred eeeccccCCCcccccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccCCCC
Q 014590 368 RNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.|+|+.-+ -..|+|.|-|.-|+||-....++
T Consensus 438 ----------------------VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er 470 (559)
T KOG1334|consen 438 ----------------------VVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER 470 (559)
T ss_pred ----------------------eEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence 67888874 57899999999999998855443
No 158
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=7.3e-18 Score=139.51 Aligned_cols=235 Identities=13% Similarity=0.170 Sum_probs=182.8
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCC--eEEEecCCeEEEEECCC
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDES--KIVGLIGTRICIWRRNG 181 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~i~~w~~~~ 181 (422)
+.|.+|..+|++++| ++| .|+|+|.|..|.+||+..|.+++.+.....+....|+|... .++.-.+..-.+-++..
T Consensus 59 r~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~ 138 (405)
T KOG1273|consen 59 RMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSD 138 (405)
T ss_pred hhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecC
Confidence 467899999999999 577 99999999999999999999999999998888899998443 33454555555666554
Q ss_pred Ccee-eecC-CCcee---eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC-ccEEEEEecC-CCEEEEEcCCC
Q 014590 182 LRSV-FPSR-EGTFM---KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-APVTSLSLSE-DQLIISGSSLG 254 (422)
Q Consensus 182 ~~~~-~~~~-~~~~~---~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~-~~~l~s~~~dg 254 (422)
+... +... .+... ....+...++++++|...|.+.++|.++.+++..++... ..|..+.++. +..++.-+.|.
T Consensus 139 ~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDR 218 (405)
T KOG1273|consen 139 PKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDR 218 (405)
T ss_pred CceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCc
Confidence 4432 2211 11111 111245567779999999999999999999998887665 7888898984 58999999999
Q ss_pred cEEEEeCCCC----c--cc------------cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccCC-Cceee
Q 014590 255 SIAISGLSSD----Q--RL------------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRISP-NVVYS 314 (422)
Q Consensus 255 ~i~iwd~~~~----~--~~------------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~ 314 (422)
.|+.|+++.- + .+ ..-.+++|+.+|.|+++|+. ...++||....|.+++.+.|.+ .....
T Consensus 219 vIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~D 298 (405)
T KOG1273|consen 219 VIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLD 298 (405)
T ss_pred eEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheee
Confidence 9999998721 1 11 45568899999999988874 4569999999999999998877 56677
Q ss_pred eeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 315 LQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 315 l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
+. |+|-...+++- ..|.|+||.....
T Consensus 299 V~-whp~rp~i~si-~sg~v~iw~~~~~ 324 (405)
T KOG1273|consen 299 VN-WHPVRPIIASI-ASGVVYIWAVVQV 324 (405)
T ss_pred cc-cccceeeeeec-cCCceEEEEeecc
Confidence 88 88888878777 7889999987543
No 159
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=8.7e-19 Score=155.60 Aligned_cols=205 Identities=18% Similarity=0.242 Sum_probs=162.8
Q ss_pred EeeccccceeEEEecC--CeEEEEecCCeEEEEEcCC--------CeEEEeeeCCCce-eeEEEecCCCeEEEecCCeEE
Q 014590 107 QWKAHSVGVDQCRMKR--GLILTGVGDKVMRLWSLEG--------YKCVEEYSLPNAA-SLVDFDFDESKIVGLIGTRIC 175 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~~--~~l~s~~~dg~v~iwd~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~ 175 (422)
++..|.+.|+.++|+. ..|++++.||++++|+++. -+.+.+|.+|.+. .++++..
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~-------------- 354 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS-------------- 354 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC--------------
Confidence 8889999999999953 3999999999999999943 1344555555433 2233333
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc----------ceeeeeecCCccEEEEEecCC-
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR----------KCSQIIRMHCAPVTSLSLSED- 244 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----------~~~~~~~~~~~~v~~l~~~~~- 244 (422)
.+..+++|+.||+|+.|++... .....+.+|.+.|+.+++++.
T Consensus 355 --------------------------n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~ 408 (577)
T KOG0642|consen 355 --------------------------NGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTK 408 (577)
T ss_pred --------------------------CceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccc
Confidence 3444666777777777743211 234567899999999999976
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc---------------------------------------------------------
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL--------------------------------------------------------- 267 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~--------------------------------------------------------- 267 (422)
..|++++.||+++.|+.......
T Consensus 409 ~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~ 488 (577)
T KOG0642|consen 409 DRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRR 488 (577)
T ss_pred cceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccc
Confidence 78999999999999998765541
Q ss_pred -cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEE
Q 014590 268 -TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 268 -~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 346 (422)
..+.-+..+|.+.+.+++..|+.|+++|..+++++.....|...+++++ +.|+|.+|++++.|+.+++|.+....++.
T Consensus 489 ~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtsla-i~~ng~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 489 YPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLA-IDPNGPYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred cCccceEEecCCCCeeEecccCCceecccccccccchheeeccceeccee-ecCCCceEEeecCCceeehhhccchheee
Confidence 4466677888899999999999999999999999999999999999999 99999999999999999999998777777
Q ss_pred EeeecC
Q 014590 347 RCVMDI 352 (422)
Q Consensus 347 ~~~~~~ 352 (422)
....|.
T Consensus 568 es~~~r 573 (577)
T KOG0642|consen 568 ESTAHR 573 (577)
T ss_pred cccccc
Confidence 665554
No 160
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=1.1e-17 Score=138.64 Aligned_cols=191 Identities=15% Similarity=0.167 Sum_probs=141.1
Q ss_pred eeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCce-----eee-cCCCceeeeEEEeeeCCe-EEEecCCCeEEE
Q 014590 147 EYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRS-----VFP-SREGTFMKGLCMRYFDPE-AVVGCEDGTARV 217 (422)
Q Consensus 147 ~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~i 217 (422)
.+++|. .+..++|+.||+.|+ ++.|++|++|+++.... +.. ...++. ..+.+.++-.. +++.-...++++
T Consensus 81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhp-T~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHP-TRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCc-eEEEECCCcceEEEEEccCCEEEE
Confidence 345554 456699999999999 99999999999876431 111 122232 34455555444 555666778999
Q ss_pred EeCCCcc---eee---------eeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEec
Q 014590 218 FDMYSRK---CSQ---------IIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNP 277 (422)
Q Consensus 218 wd~~~~~---~~~---------~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~ 277 (422)
|.+...+ ... .-+.|.-.+..+-...+ .++++++.|..|.+|+++ |+.+ ..-+..+.||
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP 238 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSP 238 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCC
Confidence 9764322 111 11345556666666555 799999999999999998 7766 5556678999
Q ss_pred CCCEEEEEeCCCeEEEEECC---CC-----eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 278 CSRLVFAGTTAGYASCWDLR---TM-----KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 278 ~~~~l~~g~~dg~i~iwd~~---~~-----~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+|+++++++-.-.|++|.+- .| ..+..+++|...|..++ |+++...+++.|.||+++|||..
T Consensus 239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~a-Fsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAA-FSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeee-eCCCcceeEEEecCCcEEEeecc
Confidence 99999999988889999863 22 34567899999999999 99999999999999999999975
No 161
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.81 E-value=1.6e-18 Score=156.67 Aligned_cols=234 Identities=14% Similarity=0.165 Sum_probs=189.8
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
.+....+|+||.+.|.|+++ .|| .++||+.|+.|.+|+.+- +-+..+.+.+.+.++.|+|-...++++.=...-+|.
T Consensus 42 dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS 120 (1081)
T KOG1538|consen 42 DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWS 120 (1081)
T ss_pred CcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeeeccCCeeeEeecCchHHHhhhcchhhccccC
Confidence 45677899999999999999 477 999999999999999653 555667778888999999999999977777888898
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee---cCCccEEEEEecCC------CEEEE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR---MHCAPVTSLSLSED------QLIIS 249 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~~~------~~l~s 249 (422)
.+.....-. .........+|..++.+++.|-.+|+|.+-+- +++....++ +...+|++++|+|. ..+++
T Consensus 121 ~~qK~V~K~-kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV 198 (1081)
T KOG1538|consen 121 PEQKSVSKH-KSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAV 198 (1081)
T ss_pred hhhhhHHhh-hhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEE
Confidence 766542211 12222345667778888999999999999875 455433333 46789999999973 58888
Q ss_pred EcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 250 GSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
.....++.++.+. |+.+ ....|+.+-++|.+++.|+.|+.+.+|- +.|-.+.++.....+|++++ ..|++
T Consensus 199 ~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~-~~PNs 275 (1081)
T KOG1538|consen 199 ADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQ-AKPNS 275 (1081)
T ss_pred EeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEE-EccCC
Confidence 9999999999884 4433 6778899999999999999999999986 55888888877889999999 99999
Q ss_pred CEEEEEecCCeEEEEECC
Q 014590 323 STLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~ 340 (422)
++++.|+.||+|-.|++.
T Consensus 276 Q~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 276 QYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred ceEEEEEccCeeehhhhH
Confidence 999999999999999864
No 162
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=9.3e-18 Score=142.76 Aligned_cols=291 Identities=11% Similarity=0.116 Sum_probs=205.4
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCC------CeEEEeeeCCC--ceeeEEEecCCCeEE-EecCC
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEG------YKCVEEYSLPN--AASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~------~~~~~~~~~~~--~~~~~~~~~~~~~l~-~~~~~ 172 (422)
..+.+.+|.+.|.++.|+ ++ +|++|+.|..+++|+++. .+++.....|+ .+.+++|...+..++ |..++
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG 127 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence 445678999999999995 45 999999999999999853 35555555544 456688888888888 88899
Q ss_pred eEEEEECCCCceeeecCCCc---eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-eeeee-e-cCCccEEEEEecCC--
Q 014590 173 RICIWRRNGLRSVFPSREGT---FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-CSQII-R-MHCAPVTSLSLSED-- 244 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~-~-~~~~~v~~l~~~~~-- 244 (422)
+|..-|+++.+.+....... .+..+...+..+.+++.+.++.|.+||.+... .+..+ . .......++-|+|.
T Consensus 128 ~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P 207 (609)
T KOG4227|consen 128 TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETP 207 (609)
T ss_pred eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCc
Confidence 99999999988764332222 34456666777779999999999999997654 22211 1 22345678889986
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee-eeeccCC
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL-WETRISP 309 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~ 309 (422)
.++++.+..+-+-+||.+..+.. ..-.++.|+|+|+.+.+--....-.+||+-+..+. ..+. |.
T Consensus 208 ~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D-~N 286 (609)
T KOG4227|consen 208 ALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD-HN 286 (609)
T ss_pred eeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc-CC
Confidence 78999999999999999876543 22367889999999888776666778888764443 2332 22
Q ss_pred -------CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEe--eecCCcccccCCCCCCeEEeeeccccCCCc--
Q 014590 310 -------NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC--VMDIGSASSSSNKVSGVIERNEGRRLSAGC-- 378 (422)
Q Consensus 310 -------~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~-- 378 (422)
..+.+++ |- +...+++|+.+-.|++|.+........| .+|.. ...+...
T Consensus 287 ~~GY~N~~T~KS~~-F~-~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~------------------~~~~~~~~i 346 (609)
T KOG4227|consen 287 PNGYCNIKTIKSMT-FI-DDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDE------------------EEMPSEIFI 346 (609)
T ss_pred CCcceeeeeeeeee-ee-cceeeeccCcccceEEEecCCCccccCccccCcch------------------hhCchhhee
Confidence 2355565 53 4455999999999999988643222221 11111 0111110
Q ss_pred -ccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 379 -CIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 379 -~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
.-.....+|.+.++.+.| +..+|++.|-...+++|..
T Consensus 347 ~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 347 EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred cceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 112335789999999999 4688999999999999964
No 163
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=1.7e-16 Score=148.21 Aligned_cols=246 Identities=13% Similarity=0.143 Sum_probs=174.1
Q ss_pred ceeeEEeeccccceeEEEe-c--C--CeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEE-----------------
Q 014590 102 RIDIDQWKAHSVGVDQCRM-K--R--GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDF----------------- 159 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~--~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~----------------- 159 (422)
+.+++.|++|..+++.+.+ + . .++++++.||.|++||...+++++++..+-.+..+.+
T Consensus 47 g~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~ 126 (792)
T KOG1963|consen 47 GECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVED 126 (792)
T ss_pred HhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeeccc
Confidence 4567789999999999988 2 3 2888999999999999999998888765433222211
Q ss_pred ------------------------------------------ecCCCeEEEecCCeEEEEECCCCcee---eecCCCce-
Q 014590 160 ------------------------------------------DFDESKIVGLIGTRICIWRRNGLRSV---FPSREGTF- 193 (422)
Q Consensus 160 ------------------------------------------~~~~~~l~~~~~~~i~~w~~~~~~~~---~~~~~~~~- 193 (422)
++.+.......+..+.+|+....... ......|.
T Consensus 127 ~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf 206 (792)
T KOG1963|consen 127 YSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTF 206 (792)
T ss_pred ceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcc
Confidence 11111111222334555555543211 11111222
Q ss_pred -eeeEEEeeeCCeEEEecCCCeEEEEeCCC--c--ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc
Q 014590 194 -MKGLCMRYFDPEAVVGCEDGTARVFDMYS--R--KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 194 -~~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~--~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
..+.++++.+..+++|..||.|.+|.--. + .....+.-|...|.+++|+++ .++++|+.+|.+.+|.+.+++..
T Consensus 207 ~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kq 286 (792)
T KOG1963|consen 207 NITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQ 286 (792)
T ss_pred cceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcc
Confidence 35677888888899999999999996432 1 234556678899999999976 89999999999999999988755
Q ss_pred ------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC-----------CCceeeeeeEecCCCEEEEEec
Q 014590 268 ------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS-----------PNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 268 ------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
++|..+.++||+.+.+....|+.|.+....+.+...++.+- .+-.+.+. ++|.-+.++-.+.
T Consensus 287 fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~-idpr~~~~vln~~ 365 (792)
T KOG1963|consen 287 FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVS-IDPRTNSLVLNGH 365 (792)
T ss_pred cccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEE-EcCCCCceeecCC
Confidence 99999999999999999999999999988665544333321 23345555 7776667777888
Q ss_pred CCeEEEEECCCCceEEEe
Q 014590 331 DGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~ 348 (422)
.|.|.+||+.+.+.+..+
T Consensus 366 ~g~vQ~ydl~td~~i~~~ 383 (792)
T KOG1963|consen 366 PGHVQFYDLYTDSTIYKL 383 (792)
T ss_pred CceEEEEeccccceeeeE
Confidence 888888888765554444
No 164
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.79 E-value=1.2e-17 Score=138.63 Aligned_cols=207 Identities=18% Similarity=0.218 Sum_probs=165.9
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCC------CceeeEEEecCCCeEEEecCCeEEEEECC-CCc--ee----eecCC
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLP------NAASLVDFDFDESKIVGLIGTRICIWRRN-GLR--SV----FPSRE 190 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~i~~w~~~-~~~--~~----~~~~~ 190 (422)
++++.+.|.-|++||.-+|+....+..- ....+++|+|||..|+++....|+++|+. .++ .+ .....
T Consensus 125 l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~ 204 (406)
T KOG2919|consen 125 LFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKF 204 (406)
T ss_pred eeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccc
Confidence 8999999999999999999998888752 23467999999999999999999999984 333 11 11122
Q ss_pred --CceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCCcEEEEeCCCCc
Q 014590 191 --GTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGSIAISGLSSDQ 265 (422)
Q Consensus 191 --~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg~i~iwd~~~~~ 265 (422)
..++..+++++... .++.|+....+-|+.-..+.++..+.+|.+.|+.+.|.++ +.|.+|+ .|..|..||++.-.
T Consensus 205 gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 205 GQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR 284 (406)
T ss_pred cccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc
Confidence 23344555555544 4999999999999998889999999999999999999986 7788876 47789999998755
Q ss_pred cc---------cceEeE--EEecCCCEEEEEeCCCeEEEEECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 266 RL---------TGIKTL--CYNPCSRLVFAGTTAGYASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 266 ~~---------~~v~~~--~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
.. ..-..| ...|++++|++|+.||.|++||+++ +..+..+..|...++.++ ++|--..+++++..
T Consensus 285 ~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvs-lnP~mpilatssGq 361 (406)
T KOG2919|consen 285 DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVS-LNPIMPILATSSGQ 361 (406)
T ss_pred chhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccccccccee-cCcccceeeeccCc
Confidence 44 122333 4468999999999999999999998 777888888999999999 99987788877644
No 165
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2.3e-17 Score=131.80 Aligned_cols=214 Identities=16% Similarity=0.135 Sum_probs=149.9
Q ss_pred EEeeeCCeEEEecCCCeEEEEeCCC---------c-ceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc
Q 014590 198 CMRYFDPEAVVGCEDGTARVFDMYS---------R-KCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 198 ~~~~~~~~l~~~~~d~~i~iwd~~~---------~-~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
++++...++++|..+|.|.+..+.+ + ..+-..++|.++++.++|. +.++++|+ ||.|+-|.-+.....
T Consensus 17 a~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~-d~~Lls~g-dG~V~gw~W~E~~es 94 (325)
T KOG0649|consen 17 AISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH-DDFLLSGG-DGLVYGWEWNEEEES 94 (325)
T ss_pred hhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee-hhheeecc-CceEEEeeehhhhhh
Confidence 4455566699999999999998743 1 2445568999999999997 55677765 499998876543321
Q ss_pred --------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEE
Q 014590 268 --------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 268 --------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s 327 (422)
..|++|...|..+-++.++.|+.++-||+++|+..+++++|+..|.++. --.....+++
T Consensus 95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv-~R~~~~qils 173 (325)
T KOG0649|consen 95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVV-GRNANGQILS 173 (325)
T ss_pred ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeee-ecccCcceee
Confidence 6789999999888888888999999999999999999999999999998 5344456999
Q ss_pred EecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEE----eeeccccCCCcccccCCCCCCCCeEE
Q 014590 328 GGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIE----RNEGRRLSAGCCIDRIPKTIRPPITC 393 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~----~~~~~~~~~~~~~~~~~~~h~~~v~~ 393 (422)
|++||++++||.++++++..+....... ..+++++|=.+- ....|.++...+...++ ...+|..
T Consensus 174 G~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~lslwhLrsse~t~vfp--ipa~v~~ 251 (325)
T KOG0649|consen 174 GAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPKLSLWHLRSSESTCVFP--IPARVHL 251 (325)
T ss_pred cCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCCCceeEEeccCCCceEEEe--cccceeE
Confidence 9999999999999999988876533311 111222221110 01112233322233222 2355666
Q ss_pred EEecCEEEEEEeCCCeEEEEEcc
Q 014590 394 LAVGMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 394 i~~~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+.|..+.++++|....+.-|.+.
T Consensus 252 v~F~~d~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 252 VDFVDDCVLIGGEGNHVQSYTLN 274 (325)
T ss_pred eeeecceEEEeccccceeeeeec
Confidence 77777777777777777777654
No 166
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=1.1e-16 Score=127.93 Aligned_cols=217 Identities=16% Similarity=0.189 Sum_probs=154.7
Q ss_pred cccceeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEE
Q 014590 99 EEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 99 ~~~~~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
.++...+-..++|.++|+.++|.|.+|++|+. |.|+=|.......-... =.+|.
T Consensus 49 ~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E~~es~~~-------------------------K~lwe 102 (325)
T KOG0649|consen 49 PPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNEEEESLAT-------------------------KRLWE 102 (325)
T ss_pred CCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeehhhhhhccc-------------------------hhhhh
Confidence 45556677789999999999999998888875 99999987643221000 01122
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec-CCCEEEEEcCCCcEE
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIA 257 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~ 257 (422)
+..+..+- ..+-+.+..+.+.+..+.++.++.|+.++.||+++|+....+++|++.|.++.-- .+..+++|+.||+++
T Consensus 103 ~~~P~~~~-~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvR 181 (325)
T KOG0649|consen 103 VKIPMQVD-AVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVR 181 (325)
T ss_pred hcCccccC-cccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEE
Confidence 21111110 0111122344455555557777799999999999999999999999999999984 457899999999999
Q ss_pred EEeCCCCccc-----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 258 ISGLSSDQRL-----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 258 iwd~~~~~~~-----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
+||.++++.+ ..|.+++. +..++++|+. ..+.+|+++..++...+... ..+..+. |
T Consensus 182 vWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLrsse~t~vfpip-a~v~~v~-F-- 254 (325)
T KOG0649|consen 182 VWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLRSSESTCVFPIP-ARVHLVD-F-- 254 (325)
T ss_pred EEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEeccCCCceEEEecc-cceeEee-e--
Confidence 9999999876 44666665 5668888875 45999999998888777543 4566666 5
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 321 DTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
....+++++..+.|.-|.+. |......+.
T Consensus 255 ~~d~vl~~G~g~~v~~~~l~-Gvl~a~ip~ 283 (325)
T KOG0649|consen 255 VDDCVLIGGEGNHVQSYTLN-GVLQANIPV 283 (325)
T ss_pred ecceEEEeccccceeeeeec-cEEEEeccC
Confidence 34578888888889989875 555444443
No 167
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.79 E-value=9.4e-18 Score=145.40 Aligned_cols=237 Identities=18% Similarity=0.155 Sum_probs=177.0
Q ss_pred eeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeC--CCce-eeEEEecCCCeEE-EecCCeEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSL--PNAA-SLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~-~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
..+..+..|.++|.++.| +.+ .+++.|.||+|++=|++++.....+.. .... ..+.|+.+...++ +..=|.+.
T Consensus 225 d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~ 304 (498)
T KOG4328|consen 225 DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFN 304 (498)
T ss_pred CceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceE
Confidence 456778899999999999 433 999999999999999987644333333 2222 2366777665555 76667999
Q ss_pred EEECCCCcee---eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc----eeeeeecCCccEEEEEecCC-CE
Q 014590 176 IWRRNGLRSV---FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLSED-QL 246 (422)
Q Consensus 176 ~w~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~-~~ 246 (422)
+||..++... +..+.. .+..+++++..+. +++++.|++.+|||++.-. ++-....|...|.+..|+|. ..
T Consensus 305 ~iD~R~~~s~~~~~~lh~k-KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt 383 (498)
T KOG4328|consen 305 VIDLRTDGSEYENLRLHKK-KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT 383 (498)
T ss_pred EEEeecCCccchhhhhhhc-ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc
Confidence 9999887642 333443 4556777777776 9999999999999997533 22333469999999999986 66
Q ss_pred EEEEcCCCcEEEEeCC----CCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-
Q 014590 247 IISGSSLGSIAISGLS----SDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP- 309 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~----~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~- 309 (422)
+++.+.|..|++||.. ..... -......|.|+..++++|-.-..|-|+|-..++.+.++....
T Consensus 384 l~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~ 463 (498)
T KOG4328|consen 384 LLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPES 463 (498)
T ss_pred eEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccc
Confidence 9999999999999984 11111 334456899999999999999999999999888888876554
Q ss_pred CceeeeeeEecCCCEEE-EEecCCeEEEEECC
Q 014590 310 NVVYSLQHLQNDTSTLV-VGGIDGVLRVLDQN 340 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~-s~~~dg~v~vwd~~ 340 (422)
..|.++--|+|-+..++ .++..|.|+||--+
T Consensus 464 ~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 464 STIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred cccccceeecccccceeccCCccceEEEEecC
Confidence 36777766899888444 45567889988644
No 168
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.79 E-value=1.9e-15 Score=141.93 Aligned_cols=275 Identities=25% Similarity=0.416 Sum_probs=205.8
Q ss_pred EeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCe-EEEeeeCCC--ceeeEEE-ecCCC-eEE-E-ecCCeEEEE
Q 014590 107 QWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYK-CVEEYSLPN--AASLVDF-DFDES-KIV-G-LIGTRICIW 177 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~--~~~~~~~-~~~~~-~l~-~-~~~~~i~~w 177 (422)
.+.+|...+.++.+. .+ .++.++.|+.+.+|+...+. ....+.... ....+.+ .+++. .++ . ..++.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 567899999999994 55 88888899999999998876 666666633 3334445 77777 444 3 448999999
Q ss_pred ECCC-Cc-e-eeecCCCceeeeEEEeeeCCeEEEecC-CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-C-EEEEEc
Q 014590 178 RRNG-LR-S-VFPSREGTFMKGLCMRYFDPEAVVGCE-DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGS 251 (422)
Q Consensus 178 ~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-~l~s~~ 251 (422)
+... .. . .+..+... +..+++.+.+..+++++. |+.+++|+...+..+..+..|...|.+++++|+ . .+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 218 (466)
T COG2319 140 DLSTPGKLIRTLEGHSES-VTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS 218 (466)
T ss_pred EecCCCeEEEEEecCccc-EEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec
Confidence 9987 33 2 23344333 346777777777888875 999999999988889999999999999999977 4 555559
Q ss_pred CCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee-eeeeccCCCceeeeeeEecCC
Q 014590 252 SLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS-LWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~s~~~ 322 (422)
.|+.+++||...+... ... ...|+|++.++++++.|+.+++|+...... +..+..|...+.++. +.|++
T Consensus 219 ~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~ 296 (466)
T COG2319 219 SDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVA-FSPDG 296 (466)
T ss_pred CCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEE-ECCCC
Confidence 9999999988755543 221 227999998999999999999999986654 444467888999998 99988
Q ss_pred CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--CEE
Q 014590 323 STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--MKK 400 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~ 400 (422)
..+++++.|+.+.+||..+......... ..|...+..+.+. +..
T Consensus 297 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~ 342 (466)
T COG2319 297 KLLASGSSDGTVRLWDLETGKLLSSLTL----------------------------------KGHEGPVSSLSFSPDGSL 342 (466)
T ss_pred CEEEEeeCCCcEEEEEcCCCceEEEeee----------------------------------cccCCceEEEEECCCCCE
Confidence 8888899999999999887776666540 1233456666662 134
Q ss_pred EEEE-eCCCeEEEEEccCC
Q 014590 401 VVTT-HNSKYIRLWKFNYS 418 (422)
Q Consensus 401 l~s~-s~Dg~i~iW~~~~~ 418 (422)
++.+ ..|+.+.+|+....
T Consensus 343 ~~~~~~~d~~~~~~~~~~~ 361 (466)
T COG2319 343 LVSGGSDDGTIRLWDLRTG 361 (466)
T ss_pred EEEeecCCCcEEeeecCCC
Confidence 4444 67788888887654
No 169
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=1.7e-16 Score=150.68 Aligned_cols=275 Identities=14% Similarity=0.153 Sum_probs=194.1
Q ss_pred cceeEEEec--CCeEEEEecCCeEEEEEcCCCeEEEeeeCCC----ceeeEEEec--CCCeEE-EecCCeEEEEECCCC-
Q 014590 113 VGVDQCRMK--RGLILTGVGDKVMRLWSLEGYKCVEEYSLPN----AASLVDFDF--DESKIV-GLIGTRICIWRRNGL- 182 (422)
Q Consensus 113 ~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~--~~~~l~-~~~~~~i~~w~~~~~- 182 (422)
.+-..+.|. ...+++++..-.|+|||.+.++.+..|..+. .+..+.+-. |...++ ++.||.|++|+--..
T Consensus 1065 ~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~ 1144 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADK 1144 (1387)
T ss_pred CCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccc
Confidence 345556663 2378888877799999999999998887643 334455544 223333 999999999974221
Q ss_pred ----cee--eecCCC------ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec-CCccEEEEEec-C-CCEE
Q 014590 183 ----RSV--FPSREG------TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-HCAPVTSLSLS-E-DQLI 247 (422)
Q Consensus 183 ----~~~--~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~-~-~~~l 247 (422)
+.+ +....+ ....++.|......|++++.-..|+|||....+.+..+.. ....|+++.-+ + ++.+
T Consensus 1145 ~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i 1224 (1387)
T KOG1517|consen 1145 WKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNII 1224 (1387)
T ss_pred cCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceE
Confidence 111 111111 1123455555666677777789999999987777766643 33456666655 2 3899
Q ss_pred EEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCC-EEEEEeCCCeEEEEECCCCeee--eeeccCC--C
Q 014590 248 ISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRTMKSL--WETRISP--N 310 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~--~~~~~~~--~ 310 (422)
++|..||.|++||.+....- .+|..+.+.+.|- .|++|+.+|.|++||++..... .+...|. +
T Consensus 1225 ~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yG 1304 (1387)
T KOG1517|consen 1225 AAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYG 1304 (1387)
T ss_pred EEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccC
Confidence 99999999999998865442 4489999988775 4999999999999999974222 2223332 3
Q ss_pred -ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCC
Q 014590 311 -VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRP 389 (422)
Q Consensus 311 -~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~ 389 (422)
..+++. .+++...+|+|+. +.|+||++. |+.+..++.+... .....+
T Consensus 1305 s~lTal~-VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F-----------------------------~~q~~g 1352 (1387)
T KOG1517|consen 1305 SALTALT-VHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGF-----------------------------MGQRIG 1352 (1387)
T ss_pred ccceeee-eccCCCeeeecCc-ceEEEEecC-hhhhcccccCccc-----------------------------ccCcCC
Confidence 489998 9999999999998 999999987 7777777654331 122235
Q ss_pred CeEEEEec--CEEEEEEeCCCeEEEEEccCCC
Q 014590 390 PITCLAVG--MKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 390 ~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.+.|++|+ .-+++.|+.|.+|.||..+.+.
T Consensus 1353 s~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1353 SVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred CcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 77999996 4578889999999999987654
No 170
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.78 E-value=2.4e-17 Score=145.66 Aligned_cols=205 Identities=13% Similarity=0.166 Sum_probs=153.0
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCceeee-----cCCCceeeeEEEee-----eCCeEEEecCCCeEEEEeCCCccee
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLRSVFP-----SREGTFMKGLCMRY-----FDPEAVVGCEDGTARVFDMYSRKCS 226 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~ 226 (422)
...+-.|+.|+-.....+.+|+..+...+.. ...+....+..+.. .+-.++.|-..|.|.+.|....+..
T Consensus 129 ~~~~~~gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~~s 208 (636)
T KOG2394|consen 129 TNQSGKGDRLCFNVGRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFEVS 208 (636)
T ss_pred ccccCCCCEEEEecCCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchhhHHH
Confidence 3344466777766777888888775332211 11111111222211 1223888888999999998663322
Q ss_pred eeee----cCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc---------------------------------
Q 014590 227 QIIR----MHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL--------------------------------- 267 (422)
Q Consensus 227 ~~~~----~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~--------------------------------- 267 (422)
+.+. .....|+++.|-|+ ..++++-.+|.++++|.......
T Consensus 209 klfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~ 288 (636)
T KOG2394|consen 209 KLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHI 288 (636)
T ss_pred HhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEe
Confidence 2221 12468999999975 78888999999999976321110
Q ss_pred --cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
+.|...+|+|||++||+.+.||.++|||..+.+++..++..-+...|++ |||||++|++|++|--|.||.+...+.+
T Consensus 289 ~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvc-WSPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 289 GEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVC-WSPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred ccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEE-EcCCccEEEecCCcceEEEEEeccceEE
Confidence 7889999999999999999999999999999998888887778899998 9999999999999999999999999999
Q ss_pred EEeeecCCcccccCCCC
Q 014590 346 SRCVMDIGSASSSSNKV 362 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~ 362 (422)
..-.+|..-+..+++.+
T Consensus 368 ARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 368 ARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EeccccccceeeEeecc
Confidence 99999999887776664
No 171
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.78 E-value=2.3e-18 Score=164.84 Aligned_cols=229 Identities=18% Similarity=0.256 Sum_probs=175.6
Q ss_pred ceeEEEe-c-----CCeEEEEecCCeEEEEEcCC---C---eEEEeeeCCCc-eeeEEEecCCC-eEE-EecCCeEEEEE
Q 014590 114 GVDQCRM-K-----RGLILTGVGDKVMRLWSLEG---Y---KCVEEYSLPNA-ASLVDFDFDES-KIV-GLIGTRICIWR 178 (422)
Q Consensus 114 ~v~~v~~-~-----~~~l~s~~~dg~v~iwd~~~---~---~~~~~~~~~~~-~~~~~~~~~~~-~l~-~~~~~~i~~w~ 178 (422)
.-..++| + .|.+|.|..||.|.+||... + ..+.++..|++ +..+.|++... .|+ |+.+|.|.|||
T Consensus 66 rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWD 145 (1049)
T KOG0307|consen 66 RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWD 145 (1049)
T ss_pred cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEec
Confidence 3456666 2 24799999999999999865 2 23444544544 45599999766 667 88899999999
Q ss_pred CCCCceeeec-CCCceeeeEEEeeeCCe---EEEecCCCeEEEEeCCCcceeeeeecCCc--cEEEEEecCC--CEEEEE
Q 014590 179 RNGLRSVFPS-REGTFMKGLCMRYFDPE---AVVGCEDGTARVFDMYSRKCSQIIRMHCA--PVTSLSLSED--QLIISG 250 (422)
Q Consensus 179 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~~~--~~l~s~ 250 (422)
+...+.-+.. .......+.++.++.+. |++++.+|.+.|||++..+.+-.+..+.+ .+..+.|+|+ ..++++
T Consensus 146 lnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~A 225 (1049)
T KOG0307|consen 146 LNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVA 225 (1049)
T ss_pred cCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeee
Confidence 9886644322 22233345555555443 99999999999999998887777765544 4678999987 567777
Q ss_pred cCCC---cEEEEeCCCCccc--------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeE
Q 014590 251 SSLG---SIAISGLSSDQRL--------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 251 ~~dg---~i~iwd~~~~~~~--------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 318 (422)
+.|. .|.+||+|....- ..|.++.|++.+ .++++++.|+.|.+|+.++++.+.++....+++..+. |
T Consensus 226 s~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~-w 304 (1049)
T KOG0307|consen 226 SGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQ-W 304 (1049)
T ss_pred cCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeee-e
Confidence 6654 5999998754432 789999999876 8999999999999999999999999998889999999 6
Q ss_pred ecCCC-EEEEEecCCeEEEEECCCCc
Q 014590 319 QNDTS-TLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 319 s~~~~-~l~s~~~dg~v~vwd~~~~~ 343 (422)
.|... .+++++-||.|.|+.+....
T Consensus 305 ~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 305 CPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cCCCcchhhhheeccceeeeeeecCC
Confidence 66555 88889999999999987543
No 172
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.77 E-value=6.9e-17 Score=137.61 Aligned_cols=158 Identities=13% Similarity=0.106 Sum_probs=127.9
Q ss_pred eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCc-------ceeeeeecCCccEEEEEecCC--CEEEEEcCCC
Q 014590 185 VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSR-------KCSQIIRMHCAPVTSLSLSED--QLIISGSSLG 254 (422)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg 254 (422)
.+.+|.+.+. .+.|++++.. +++||.|.+|.||++..+ +++..+.+|...|-.++|+|- +.|++++.|.
T Consensus 76 ~v~GHt~~vL-Di~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVL-DIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCcccccc-ccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 4555555543 4566666655 999999999999998654 356778899999999999986 8999999999
Q ss_pred cEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 255 SIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 255 ~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
+|.+||+.+|+.+ ..|.+++|+.||.++++.+.|.+|+|||.++++.+.+-.+|.+.-..=+.|-.+|..+-+|
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999866 8899999999999999999999999999999999998888875433322366778844444
Q ss_pred e---cCCeEEEEECCCCc
Q 014590 329 G---IDGVLRVLDQNTGE 343 (422)
Q Consensus 329 ~---~dg~v~vwd~~~~~ 343 (422)
- .+..+-+||..+.+
T Consensus 235 fsr~seRq~aLwdp~nl~ 252 (472)
T KOG0303|consen 235 FSRMSERQIALWDPNNLE 252 (472)
T ss_pred cccccccceeccCccccc
Confidence 3 47789999876543
No 173
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.77 E-value=2.1e-15 Score=136.87 Aligned_cols=258 Identities=11% Similarity=0.125 Sum_probs=168.4
Q ss_pred EEEEecCCeEEEEEcCC-C--eEEEeeeCCCceeeEEEecCCCeEE-E-ecCCeEEEEECCC-Cce-eee-cCCCceeee
Q 014590 125 ILTGVGDKVMRLWSLEG-Y--KCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNG-LRS-VFP-SREGTFMKG 196 (422)
Q Consensus 125 l~s~~~dg~v~iwd~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~~w~~~~-~~~-~~~-~~~~~~~~~ 196 (422)
+++...|+.|.+|++.+ + +.+..+........++++|+++.|+ + ..++.|.+|+++. +.. ... ...+.....
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~ 84 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTH 84 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceE
Confidence 34446789999999964 4 3556666555667799999999886 3 4578999999863 322 111 111212345
Q ss_pred EEEeeeCCeEEEec-CCCeEEEEeCCC-cc---eeeeeecCCccEEEEEecCC-CEE-EEEcCCCcEEEEeCCCCccc--
Q 014590 197 LCMRYFDPEAVVGC-EDGTARVFDMYS-RK---CSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSIAISGLSSDQRL-- 267 (422)
Q Consensus 197 ~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~---~~~~~~~~~~~v~~l~~~~~-~~l-~s~~~dg~i~iwd~~~~~~~-- 267 (422)
+++.++++.+++++ .++.|.+|++.+ +. .+..+.+ ......++++|+ +++ ++...++.|.+||+.+...+
T Consensus 85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~ 163 (330)
T PRK11028 85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVA 163 (330)
T ss_pred EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccc
Confidence 67777787766665 488999999864 32 2233322 234567888987 555 45556799999999763211
Q ss_pred -----------cceEeEEEecCCCEEEEEeC-CCeEEEEECCC--C--eeeeeeccC------CCceeeeeeEecCCCEE
Q 014590 268 -----------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRT--M--KSLWETRIS------PNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 268 -----------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~--~--~~~~~~~~~------~~~v~~l~~~s~~~~~l 325 (422)
.....++|+|+|++++++.. ++.|.+|++.. + +.+.++..+ ......+. ++|+++++
T Consensus 164 ~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~-~~pdg~~l 242 (330)
T PRK11028 164 QEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIH-ITPDGRHL 242 (330)
T ss_pred cCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEE-ECCCCCEE
Confidence 44578999999999988876 89999999973 2 233333221 11233577 89999999
Q ss_pred EEEec-CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEE
Q 014590 326 VVGGI-DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVV 402 (422)
Q Consensus 326 ~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~ 402 (422)
+++.. ++.|.+|++.+.....++..+.. .+ .....+.+ ||++|+
T Consensus 243 yv~~~~~~~I~v~~i~~~~~~~~~~~~~~-------------------------------~~--~~p~~~~~~~dg~~l~ 289 (330)
T PRK11028 243 YACDRTASLISVFSVSEDGSVLSFEGHQP-------------------------------TE--TQPRGFNIDHSGKYLI 289 (330)
T ss_pred EEecCCCCeEEEEEEeCCCCeEEEeEEEe-------------------------------cc--ccCCceEECCCCCEEE
Confidence 88854 78999999864332222222111 00 12234555 687777
Q ss_pred EEeC-CCeEEEEEccC
Q 014590 403 TTHN-SKYIRLWKFNY 417 (422)
Q Consensus 403 s~s~-Dg~i~iW~~~~ 417 (422)
++.. +++|.+|+++.
T Consensus 290 va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 290 AAGQKSHHISVYEIDG 305 (330)
T ss_pred EEEccCCcEEEEEEcC
Confidence 7665 89999998863
No 174
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=2e-16 Score=130.66 Aligned_cols=191 Identities=11% Similarity=0.229 Sum_probs=142.2
Q ss_pred ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc----ceeeeeecCCccEEEEEec-CC--CEEEEEcCCCcEEEEeCCCC
Q 014590 192 TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSLSLS-ED--QLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~l~~~-~~--~~l~s~~~dg~i~iwd~~~~ 264 (422)
..+..+.+.+.+..+++|+.|++|+|||.+.. .+....+.|.+.|..+.|. |. +.+++++.|+++.+|.-...
T Consensus 14 DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~ 93 (361)
T KOG2445|consen 14 DLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEK 93 (361)
T ss_pred ceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccc
Confidence 45567778888889999999999999996543 3566778999999999998 54 89999999999999986321
Q ss_pred ccc----------------cceEeEEEecC--CCEEEEEeCCCeEEEEECCC------Ceeeeeec-------cCCCcee
Q 014590 265 QRL----------------TGIKTLCYNPC--SRLVFAGTTAGYASCWDLRT------MKSLWETR-------ISPNVVY 313 (422)
Q Consensus 265 ~~~----------------~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~------~~~~~~~~-------~~~~~v~ 313 (422)
..- +.|+.+.|.|. |-.||+++.||.++||+... ..+..+++ .+..+..
T Consensus 94 ~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~ 173 (361)
T KOG2445|consen 94 SEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCF 173 (361)
T ss_pred ccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcce
Confidence 111 88999999985 67899999999999998753 23333333 3456677
Q ss_pred eeeeEecC---CCEEEEEecC-----CeEEEEECCCCc-eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCC
Q 014590 314 SLQHLQND---TSTLVVGGID-----GVLRVLDQNTGE-VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIP 384 (422)
Q Consensus 314 ~l~~~s~~---~~~l~s~~~d-----g~v~vwd~~~~~-~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~ 384 (422)
|+. |+|. ..+||.|+.+ +.++||....+. ..... ..+
T Consensus 174 Cvs-Wn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kv--------------------------------a~L- 219 (361)
T KOG2445|consen 174 CVS-WNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKV--------------------------------AEL- 219 (361)
T ss_pred EEe-eccccccCceEEEEcccCCccccceEEEEecCCcceeeee--------------------------------hhc-
Confidence 888 6654 3478888866 468888764322 11111 111
Q ss_pred CCCCCCeEEEEec------CEEEEEEeCCCeEEEEEccC
Q 014590 385 KTIRPPITCLAVG------MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 385 ~~h~~~v~~i~~~------~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.+|..+|++|+|. -.+|++++.|| |+||.+..
T Consensus 220 ~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 220 PDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred CCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence 3577899999992 37899999999 99999874
No 175
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.76 E-value=9.3e-19 Score=161.89 Aligned_cols=256 Identities=17% Similarity=0.248 Sum_probs=174.4
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
.++.|.||..+|+|+.|. .| ++++|+.|..|+||..+++.++....+|.+... ++.+..+..++ ++.|..|++|.+
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl 261 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL 261 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence 456788999999999995 55 999999999999999999999999999876655 77777777766 777778888887
Q ss_pred CCCce--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec-----CCccEEEEEecCC-CEEEEEc
Q 014590 180 NGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-----HCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 180 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~~-~~l~s~~ 251 (422)
..+.. ++.++.|.+. .+++++ ..+.+.||++++||.+ -.++..... ...-+.++.+..+ ..+++++
T Consensus 262 ~~~~pvsvLrghtgavt-aiafsP----~~sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs 335 (1113)
T KOG0644|consen 262 PDGAPVSVLRGHTGAVT-AIAFSP----RASSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGS 335 (1113)
T ss_pred CCCchHHHHhcccccee-eeccCc----cccCCCCCceEecccc-ccccccCCCCCCcccccceeeeecccccccccccc
Confidence 77663 3566666532 233333 3366777888888875 222222110 1123344444433 5677777
Q ss_pred CCCcEEEEeCCCCccc-cceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEE
Q 014590 252 SLGSIAISGLSSDQRL-TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVG 328 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~ 328 (422)
.|+.-..|........ ..+.-+..+.+ ..+.+++-.+-.+++|++.+|...+.+.+|...++.+. ++|-+. ...++
T Consensus 336 ~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd-~Hpfn~ri~msa 414 (1113)
T KOG0644|consen 336 RDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLD-VHPFNPRIAMSA 414 (1113)
T ss_pred CCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeee-ecCCCcHhhhhc
Confidence 7777766654322111 11111111111 13455555677789999999999999999999999999 777554 56688
Q ss_pred ecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeE
Q 014590 329 GIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVI 366 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i 366 (422)
+.||...|||+-.|.+++.+........-..+|.||+-
T Consensus 415 g~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts 452 (1113)
T KOG0644|consen 415 GYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTS 452 (1113)
T ss_pred cCCCceEeeecccCCcceeeecccceeeccccCCCCce
Confidence 99999999999999988877654444444555666543
No 176
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.76 E-value=1.6e-15 Score=128.53 Aligned_cols=222 Identities=14% Similarity=0.161 Sum_probs=165.5
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCC--CeEEEEeCCCcceeeeeecCCc
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCED--GTARVFDMYSRKCSQIIRMHCA 234 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~ 234 (422)
+.|..+...|..+.....++|+.+...... ........++.+.+....++..+.+ +.+++.++..+..+..+. ...
T Consensus 11 ~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k~~-~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt 88 (391)
T KOG2110|consen 11 IGFNQDSTLLSVGSKDGYKIFSCSPFEKCF-SKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIF-FPT 88 (391)
T ss_pred eeeccceeEEEccCCCceeEEecCchHHhh-cccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEe-cCC
Confidence 445666666663333445666655444322 2222233466667777765555544 458999998887776665 356
Q ss_pred cEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEe--CCCeEEEEECCCCeee
Q 014590 235 PVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGT--TAGYASCWDLRTMKSL 302 (422)
Q Consensus 235 ~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~--~dg~i~iwd~~~~~~~ 302 (422)
+|.++.++..++++ +-. ..|++||+++.+.+ ..+.++++++.+.+++--+ ..|.|.+||+.+.+++
T Consensus 89 ~IL~VrmNr~RLvV-~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v 166 (391)
T KOG2110|consen 89 SILAVRMNRKRLVV-CLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPV 166 (391)
T ss_pred ceEEEEEccceEEE-EEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceee
Confidence 79999996555444 433 34999999999887 4466666666777888643 5789999999999999
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCe-EEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccc
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGV-LRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCID 381 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~ 381 (422)
..+..|.+.+.+++ |+++|.+||++|+.|+ |||+.+.+|+.+.+|.....
T Consensus 167 ~~I~aH~~~lAala-fs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~---------------------------- 217 (391)
T KOG2110|consen 167 NTINAHKGPLAALA-FSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY---------------------------- 217 (391)
T ss_pred eEEEecCCceeEEE-ECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce----------------------------
Confidence 99999999999999 9999999999999997 58999999999999976433
Q ss_pred cCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 382 RIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 382 ~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
-..|.+++| |+++|++.|..++|.+++++.
T Consensus 218 ------~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 218 ------PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred ------eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 136889999 689999999999999999875
No 177
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.76 E-value=4.4e-15 Score=125.84 Aligned_cols=225 Identities=15% Similarity=0.188 Sum_probs=162.6
Q ss_pred cceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC--CeEEEEECCCCceeee
Q 014590 113 VGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG--TRICIWRRNGLRSVFP 187 (422)
Q Consensus 113 ~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~--~~i~~w~~~~~~~~~~ 187 (422)
..+..+.|. +. .|..|+.|| -++++.+.-... .-...++..++..-+....++ .+.+ ..+++++.+....+..
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~-~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe 83 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKC-FSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICE 83 (391)
T ss_pred cceeeeeeccceeEEEccCCCc-eeEEecCchHHh-hcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEE
Confidence 345556674 33 666677776 567776543221 111223455566666666666 4433 4588888887765533
Q ss_pred cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec---CCccEEEEEecCC-CEEEEE--cCCCcEEEEeC
Q 014590 188 SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM---HCAPVTSLSLSED-QLIISG--SSLGSIAISGL 261 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~l~~~~~-~~l~s~--~~dg~i~iwd~ 261 (422)
..-.. .++++.-+.+.|+++-.+. |+|||+.+-+.++++.. +...+.++.++++ .+++.- ...|.|.+||+
T Consensus 84 ~~fpt--~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~ 160 (391)
T KOG2110|consen 84 IFFPT--SILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDT 160 (391)
T ss_pred EecCC--ceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEc
Confidence 33222 3567777777788877664 99999999998888753 4445666666544 455543 34689999999
Q ss_pred CCCccc-------cceEeEEEecCCCEEEEEeCCCe-EEEEECCCCeeeeeeccCC--CceeeeeeEecCCCEEEEEecC
Q 014590 262 SSDQRL-------TGIKTLCYNPCSRLVFAGTTAGY-ASCWDLRTMKSLWETRISP--NVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 262 ~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~~~--~~v~~l~~~s~~~~~l~s~~~d 331 (422)
.+-+.. +.+.+++|+++|.+||++++.|+ |+|+.+.+|+.+.+++-.. ..|++++ |+|++++|++.|..
T Consensus 161 ~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~-Fs~ds~~L~~sS~T 239 (391)
T KOG2110|consen 161 INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLS-FSPDSQFLAASSNT 239 (391)
T ss_pred ccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEE-ECCCCCeEEEecCC
Confidence 887766 89999999999999999999998 7999999999999987543 5688999 99999999999999
Q ss_pred CeEEEEECCCCc
Q 014590 332 GVLRVLDQNTGE 343 (422)
Q Consensus 332 g~v~vwd~~~~~ 343 (422)
++|+||.+....
T Consensus 240 eTVHiFKL~~~~ 251 (391)
T KOG2110|consen 240 ETVHIFKLEKVS 251 (391)
T ss_pred CeEEEEEecccc
Confidence 999999987543
No 178
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.76 E-value=5.6e-16 Score=126.97 Aligned_cols=286 Identities=13% Similarity=0.103 Sum_probs=184.6
Q ss_pred eEEEEec----CCeEEEEEcCCC--eEE-EeeeCCCce-eeEEEecCCCeEE--Eec---C----CeEEEEECCCCcee-
Q 014590 124 LILTGVG----DKVMRLWSLEGY--KCV-EEYSLPNAA-SLVDFDFDESKIV--GLI---G----TRICIWRRNGLRSV- 185 (422)
Q Consensus 124 ~l~s~~~----dg~v~iwd~~~~--~~~-~~~~~~~~~-~~~~~~~~~~~l~--~~~---~----~~i~~w~~~~~~~~- 185 (422)
.+++|.. |+.|.+.+++.+ ... +.|.++.+. -.++-+|-...++ +.. + ..+.+|.+......
T Consensus 28 cFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S 107 (370)
T KOG1007|consen 28 CFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS 107 (370)
T ss_pred EEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc
Confidence 4555543 677877776553 232 334444333 3377777555544 222 1 24789988654311
Q ss_pred ----------ee-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce-eeeee-----cCCccEEEEEecC--C-C
Q 014590 186 ----------FP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQIIR-----MHCAPVTSLSLSE--D-Q 245 (422)
Q Consensus 186 ----------~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~-----~~~~~v~~l~~~~--~-~ 245 (422)
+. ...+ .+.++-|.+++..+++-. |..|.+|+++.+.. +..+. .+....++-+|+| + +
T Consensus 108 ~~~tlE~v~~Ldteavg-~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgn 185 (370)
T KOG1007|consen 108 NSSTLECVASLDTEAVG-KINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGN 185 (370)
T ss_pred ccchhhHhhcCCHHHhC-ceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccc
Confidence 11 1112 335566667666676655 88999999987754 33332 3455678888998 3 4
Q ss_pred EEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCC-EEEEEeCCCeEEEEECCC-CeeeeeeccCCCceeee
Q 014590 246 LIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRT-MKSLWETRISPNVVYSL 315 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l 315 (422)
.+++ ..|+++..||+++.... ..|..+.|+|+.+ +|++++.||.|++||.+. ..++.++.+|...|+++
T Consensus 186 qv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~V 264 (370)
T KOG1007|consen 186 QVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAV 264 (370)
T ss_pred eEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEE
Confidence 5544 57899999999987766 6699999999875 678889999999999984 57889999999999999
Q ss_pred eeEecC-CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEE
Q 014590 316 QHLQND-TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCL 394 (422)
Q Consensus 316 ~~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i 394 (422)
. |.|. .++|++|+.|..|.+|...+-.....+....+. +-++|.... .......+..+.+ ...|...|.++
T Consensus 265 R-fn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~de----se~e~~dse--er~kpL~dg~l~t-ydehEDSVY~~ 336 (370)
T KOG1007|consen 265 R-FNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDE----SESEDEDSE--ERVKPLQDGQLET-YDEHEDSVYAL 336 (370)
T ss_pred E-ecCccceEEEecCCCceeEEEecccccccccccccccc----ccCcchhhH--Hhccccccccccc-ccccccceEEE
Confidence 9 7664 568999999999999987644333333222110 000000000 0000011111222 24588999999
Q ss_pred Ee---cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 395 AV---GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 395 ~~---~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
+| |+-.+++-|.||++.|=.++..-|
T Consensus 337 aWSsadPWiFASLSYDGRviIs~V~r~~k 365 (370)
T KOG1007|consen 337 AWSSADPWIFASLSYDGRVIISSVPRFLK 365 (370)
T ss_pred eeccCCCeeEEEeccCceEEeecCChhhh
Confidence 99 678999999999999987765443
No 179
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.76 E-value=1.6e-16 Score=144.04 Aligned_cols=259 Identities=13% Similarity=0.178 Sum_probs=195.6
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
.|..++| ||| .|+.+. +..+.+||...|..++++++|.. +.+++++.||+.++ |+.|..|.+|+..-.-.+...|
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH 92 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSH 92 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeecc
Confidence 8999999 788 444443 35899999999999999999855 56699999999999 9999999999876554444444
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~- 267 (422)
.+ .+.++.+++....+++++.+ ..-+|..+.....+ .+ ....+.+.+|..| ++++.|-.+|+|.+-+.......
T Consensus 93 ~D-~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K-~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~ 168 (1081)
T KOG1538|consen 93 ND-AIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK-HK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVK 168 (1081)
T ss_pred CC-eeeEeecCchHHHhhhcchh-hccccChhhhhHHh-hh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceE
Confidence 44 34456666666668888765 57789876544332 22 2456788889865 89999999999999875433322
Q ss_pred --------cceEeEEEecCC-----CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeE
Q 014590 268 --------TGIKTLCYNPCS-----RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVL 334 (422)
Q Consensus 268 --------~~v~~~~~~~~~-----~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v 334 (422)
++|.+++|+|.. ..+++...+.++..|.+. |+.+..-+.-.-...|+. +-++|.+++.|+.|+.+
T Consensus 169 I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~Cis-Yf~NGEy~LiGGsdk~L 246 (1081)
T KOG1538|consen 169 IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCIS-YFTNGEYILLGGSDKQL 246 (1081)
T ss_pred EeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhhe-eccCCcEEEEccCCCce
Confidence 889999999864 578888888888888876 555554343344556788 55899999999999999
Q ss_pred EEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEE
Q 014590 335 RVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~i 412 (422)
++|-. .|-.+.++.. ....|+.++. ++++++.|..||+|--
T Consensus 247 ~~fTR-~GvrLGTvg~------------------------------------~D~WIWtV~~~PNsQ~v~~GCqDGTiAC 289 (1081)
T KOG1538|consen 247 SLFTR-DGVRLGTVGE------------------------------------QDSWIWTVQAKPNSQYVVVGCQDGTIAC 289 (1081)
T ss_pred EEEee-cCeEEeeccc------------------------------------cceeEEEEEEccCCceEEEEEccCeeeh
Confidence 99964 4766666533 2347888888 7899999999999998
Q ss_pred EEcc
Q 014590 413 WKFN 416 (422)
Q Consensus 413 W~~~ 416 (422)
|++-
T Consensus 290 yNl~ 293 (1081)
T KOG1538|consen 290 YNLI 293 (1081)
T ss_pred hhhH
Confidence 8764
No 180
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.75 E-value=3e-16 Score=128.64 Aligned_cols=239 Identities=15% Similarity=0.158 Sum_probs=172.8
Q ss_pred ceeeEEeeccccceeEEEec---C-C-eEEEEec----CCeEEEEEc--CCCeEEE--eeeCCCceeeEEEecCCCe---
Q 014590 102 RIDIDQWKAHSVGVDQCRMK---R-G-LILTGVG----DKVMRLWSL--EGYKCVE--EYSLPNAASLVDFDFDESK--- 165 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~---~-~-~l~s~~~----dg~v~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 165 (422)
++.+..+..|- ++.++.|+ + + +|+.|+. .+.|.|-.+ ++++.+. .|.++-...-+.|.|+...
T Consensus 35 ~~eiy~Y~ap~-~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~p 113 (364)
T KOG0290|consen 35 RKEIYTYNAPW-PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYP 113 (364)
T ss_pred cceEEEecCCC-ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCc
Confidence 34555665543 56788884 2 3 8888875 456666544 3454443 3455555666899998752
Q ss_pred -EEEecCCeEEEEECCCCce------eee----cCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcce---eeeee
Q 014590 166 -IVGLIGTRICIWRRNGLRS------VFP----SREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKC---SQIIR 230 (422)
Q Consensus 166 -l~~~~~~~i~~w~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~---~~~~~ 230 (422)
++++.+..+++|.+..... ++. .+.........|+...+. +.+.+-|.+..|||++++.. ...+-
T Consensus 114 dlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLI 193 (364)
T KOG0290|consen 114 DLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLI 193 (364)
T ss_pred chhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEE
Confidence 5588889999999874221 111 112222334444444444 88999999999999998743 45567
Q ss_pred cCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecC-CCEEEEEeC-CCeEEEEEC
Q 014590 231 MHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPC-SRLVFAGTT-AGYASCWDL 296 (422)
Q Consensus 231 ~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~-~~~l~~g~~-dg~i~iwd~ 296 (422)
+|...|..++|..+ +.|++.+.||.+++||++..+.. .+...++|++. -+++|+-.. ...|.|.|+
T Consensus 194 AHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDi 273 (364)
T KOG0290|consen 194 AHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDI 273 (364)
T ss_pred ecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEe
Confidence 89999999999965 89999999999999999986654 56777888864 467776554 456999999
Q ss_pred CC-CeeeeeeccCCCceeeeeeEecC-CCEEEEEecCCeEEEEECCCC
Q 014590 297 RT-MKSLWETRISPNVVYSLQHLQND-TSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 297 ~~-~~~~~~~~~~~~~v~~l~~~s~~-~~~l~s~~~dg~v~vwd~~~~ 342 (422)
+. ..++.++++|.+.|++++ |.|. ...|++++.|..+.+||+.+.
T Consensus 274 R~P~tpva~L~~H~a~VNgIa-WaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 274 RVPCTPVARLRNHQASVNGIA-WAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred cCCCcceehhhcCcccccceE-ecCCCCceeeecCCcceEEEEecccc
Confidence 95 578899999999999999 6665 458999999999999999743
No 181
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.75 E-value=6.2e-16 Score=132.36 Aligned_cols=270 Identities=16% Similarity=0.168 Sum_probs=187.9
Q ss_pred ccceeEEEec--CC-eEEEEecCCeEEEEEcCCCe---------EEEeeeCC-CceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 112 SVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYK---------CVEEYSLP-NAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 112 ~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
..+|.++.|. +. .++||+.|..|++|-+..++ .+..+..| ..+.++.|+|+|+.|+ |+.+|.+.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 4588999993 22 89999999999999876532 22334444 4466799999999999 8888999999
Q ss_pred ECC--------C-----Cc--ee---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEE
Q 014590 178 RRN--------G-----LR--SV---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSL 239 (422)
Q Consensus 178 ~~~--------~-----~~--~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l 239 (422)
... + .+ .+ +..+. ..+.-++|.+++..+++++.|+.+++||+..|+....+..|...+..+
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~-~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgv 171 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHR-DDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGV 171 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccc-cchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccccee
Confidence 766 2 11 11 22222 223457788888889999999999999999999999999999999999
Q ss_pred EecCC-CEEEEEcCCCcEEEEeCCCCccc------------------------------cceEeEEEecCCCEEEEEeC-
Q 014590 240 SLSED-QLIISGSSLGSIAISGLSSDQRL------------------------------TGIKTLCYNPCSRLVFAGTT- 287 (422)
Q Consensus 240 ~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------------------------------~~v~~~~~~~~~~~l~~g~~- 287 (422)
+|.|- +++++-+.|...+.+++...+.+ .-...++|+|+|.++++...
T Consensus 172 awDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~ 251 (434)
T KOG1009|consen 172 AWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGL 251 (434)
T ss_pred ecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccce
Confidence 99985 88888888887776666543332 44556889999999887642
Q ss_pred ---CC-----eEEEEECCC-CeeeeeeccCCCceeeeeeEe------------------cCCCEEEEEecCCeEEEEECC
Q 014590 288 ---AG-----YASCWDLRT-MKSLWETRISPNVVYSLQHLQ------------------NDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 288 ---dg-----~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s------------------~~~~~l~s~~~dg~v~vwd~~ 340 (422)
.+ ..++|+-.. .++...+.+...++..+. |+ |.+-.+|.++.| .|+|||.+
T Consensus 252 ~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr-~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq 329 (434)
T KOG1009|consen 252 FKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVR-FSPVYYELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQ 329 (434)
T ss_pred eeeCCceeeceeEeeccccccCceeecCCCCcceEEEE-eeeeEEEeccccccccccccccceEEEEeecc-eEEEeccc
Confidence 22 234444332 233334443333333333 21 233345555544 59999988
Q ss_pred CCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 341 TGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+.+++..... -|-..|+.++| ||..|+..|.||-..+-.++..
T Consensus 330 ~~~P~~~v~n-----------------------------------ihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~ 374 (434)
T KOG1009|consen 330 TLEPLAVVDN-----------------------------------IHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPW 374 (434)
T ss_pred cccceEEEee-----------------------------------eeeeeecceeecCCCcEEEEeccCCceEEEEEcch
Confidence 7777665532 25578999999 6889999999998777665544
Q ss_pred C
Q 014590 419 D 419 (422)
Q Consensus 419 ~ 419 (422)
|
T Consensus 375 e 375 (434)
T KOG1009|consen 375 E 375 (434)
T ss_pred h
Confidence 3
No 182
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.74 E-value=1.2e-16 Score=144.02 Aligned_cols=232 Identities=18% Similarity=0.275 Sum_probs=167.8
Q ss_pred EEEecCCCeEE---EecCCeEEEEECCCCcee-----eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCc----
Q 014590 157 VDFDFDESKIV---GLIGTRICIWRRNGLRSV-----FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSR---- 223 (422)
Q Consensus 157 ~~~~~~~~~l~---~~~~~~i~~w~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~---- 223 (422)
-.|+.+...++ ++..|.|.||++...-.+ -...++..+..+.|.++++. |++++.||.|++|.+..+
T Consensus 585 nGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e 664 (1012)
T KOG1445|consen 585 NGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE 664 (1012)
T ss_pred CceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc
Confidence 34555566655 677899999999865432 22335566667777777765 999999999999998654
Q ss_pred ---ceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeE
Q 014590 224 ---KCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYA 291 (422)
Q Consensus 224 ---~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i 291 (422)
.+...+..|...|.++.|+|= +.+++++.|-+|++||++++... +.|..++|+|+|+.+|+.+.||+|
T Consensus 665 ~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~ 744 (1012)
T KOG1445|consen 665 NEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTL 744 (1012)
T ss_pred ccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceE
Confidence 355678899999999999984 89999999999999999988765 899999999999999999999999
Q ss_pred EEEECCCCe-eeeeeccCC-CceeeeeeEecCCCEEEEEecCC----eEEEEECCCC--ceEEEeeecCCcccccCCCCC
Q 014590 292 SCWDLRTMK-SLWETRISP-NVVYSLQHLQNDTSTLVVGGIDG----VLRVLDQNTG--EVLSRCVMDIGSASSSSNKVS 363 (422)
Q Consensus 292 ~iwd~~~~~-~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg----~v~vwd~~~~--~~~~~~~~~~~~~~~~~~s~d 363 (422)
++|+.++++ ++++-.+.. ..-..+. |.-+|+++++.+.|. .|.+||..+- .++.+...+...
T Consensus 745 rVy~Prs~e~pv~Eg~gpvgtRgARi~-wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvap--------- 814 (1012)
T KOG1445|consen 745 RVYEPRSREQPVYEGKGPVGTRGARIL-WACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAP--------- 814 (1012)
T ss_pred EEeCCCCCCCccccCCCCccCcceeEE-EEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccC---------
Confidence 999998764 344433321 1112344 667899888877654 5778887642 334433221110
Q ss_pred CeEEeeeccccCCCcccccCCCCCCCCeEEEEec-CEEEEEEeCCCeEEEEEccCCCCCC
Q 014590 364 GVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG-MKKVVTTHNSKYIRLWKFNYSDKYL 422 (422)
Q Consensus 364 ~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~-~~~l~s~s~Dg~i~iW~~~~~~~~~ 422 (422)
+.-|-..+.| +-+++||-.|..|.+|.+-..+.||
T Consensus 815 ------------------------s~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy~ 850 (1012)
T KOG1445|consen 815 ------------------------SPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPYL 850 (1012)
T ss_pred ------------------------ccccccccCCCceEEEecCCCceEEEEEecCCCcee
Confidence 0112223333 5678899999999999988776654
No 183
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=2.9e-16 Score=149.22 Aligned_cols=227 Identities=19% Similarity=0.245 Sum_probs=170.3
Q ss_pred cceeEEEe-c--CC-eEEEEecCCeEEEEEcC-----CCeEEEeeeC-------C-CceeeEEEecCCCeEE-EecCCeE
Q 014590 113 VGVDQCRM-K--RG-LILTGVGDKVMRLWSLE-----GYKCVEEYSL-------P-NAASLVDFDFDESKIV-GLIGTRI 174 (422)
Q Consensus 113 ~~v~~v~~-~--~~-~l~s~~~dg~v~iwd~~-----~~~~~~~~~~-------~-~~~~~~~~~~~~~~l~-~~~~~~i 174 (422)
..|+.+.+ + |. ++++|+.||.||||+-- +.+.+..+.. . +...+++|.....+|+ ++.-..|
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~I 1189 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSI 1189 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEE
Confidence 46888888 2 23 99999999999999742 2233433321 1 1224467777666776 5557899
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeee---CCeEEEecCCCeEEEEeCCCcc---eeeeeecCCcc--EEEEEecC-C-
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYF---DPEAVVGCEDGTARVFDMYSRK---CSQIIRMHCAP--VTSLSLSE-D- 244 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~--v~~l~~~~-~- 244 (422)
++||......+.....+....+.+++.+ ++.+++|..||.|++||.+... .+...+.|+.. |..+.+.+ +
T Consensus 1190 RIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1190 RIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred EEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCC
Confidence 9999998887655555544445555543 4559999999999999987543 56777889887 99999986 3
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc-----------c-ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC----
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL-----------T-GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS---- 308 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~-----------~-~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---- 308 (422)
..+++|+.||.|++||++..... + ..+++..++....+|+|+. +.|+||++. |+.+..++.+
T Consensus 1270 ~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~ 1347 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFM 1347 (1387)
T ss_pred cceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccc
Confidence 68999999999999999974222 2 4999999999999999998 899999987 4444433322
Q ss_pred ---CCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 309 ---PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 309 ---~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
.+.+.|++ |+|..-.+|+|+.|..|.||.....
T Consensus 1348 ~q~~gs~scL~-FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1348 GQRIGSVSCLA-FHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred cCcCCCcceee-ecchhHhhhhccCCceEEEeecCCc
Confidence 25678999 9999999999999999999987644
No 184
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.73 E-value=2.3e-16 Score=129.21 Aligned_cols=230 Identities=15% Similarity=0.124 Sum_probs=158.4
Q ss_pred eeEEee-ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeE-EEeeeCC------CceeeEEEec--CCCeEEEecC
Q 014590 104 DIDQWK-AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKC-VEEYSLP------NAASLVDFDF--DESKIVGLIG 171 (422)
Q Consensus 104 ~~~~l~-~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~-~~~~~~~------~~~~~~~~~~--~~~~l~~~~~ 171 (422)
.+..|. .|-+.|.|+.| |++ .+++-. |..|.+|+++.+.. ...+... .....-+|+| +++.+++..+
T Consensus 114 ~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d 192 (370)
T KOG1007|consen 114 CVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD 192 (370)
T ss_pred HhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC
Confidence 344454 46678999999 665 777665 88999999988765 4444332 1223467777 7888889999
Q ss_pred CeEEEEECCCCceeeecCCCceeeeEEEeeeCCe---EEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC--C
Q 014590 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE---AVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED--Q 245 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~--~ 245 (422)
+++..||+++..........|...+..+.++.+. |++|+.||.|++||.+.. .+++.+.+|...|+++.|+|. +
T Consensus 193 ~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdq 272 (370)
T KOG1007|consen 193 STLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQ 272 (370)
T ss_pred CcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccce
Confidence 9999999999887766666555445555544443 999999999999999865 478999999999999999984 8
Q ss_pred EEEEEcCCCcEEEEeCCCCccccceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 246 LIISGSSLGSIAISGLSSDQRLTGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
++++|+.|..|.+|....-.. -..+.+..|..-.-.....-.++ -+. ...+.++..|+..|++++|-+.+.-.+
T Consensus 273 LiLs~~SDs~V~Lsca~svSS---E~qi~~~~dese~e~~dseer~k--pL~-dg~l~tydehEDSVY~~aWSsadPWiF 346 (370)
T KOG1007|consen 273 LILSGGSDSAVNLSCASSVSS---EQQIEFEDDESESEDEDSEERVK--PLQ-DGQLETYDEHEDSVYALAWSSADPWIF 346 (370)
T ss_pred EEEecCCCceeEEEecccccc---ccccccccccccCcchhhHHhcc--ccc-ccccccccccccceEEEeeccCCCeeE
Confidence 999999999999997643211 00111211110000000000111 111 124457888999999999555566678
Q ss_pred EEEecCCeEEEEECC
Q 014590 326 VVGGIDGVLRVLDQN 340 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~ 340 (422)
|+-+.||.+.|=.+.
T Consensus 347 ASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 347 ASLSYDGRVIISSVP 361 (370)
T ss_pred EEeccCceEEeecCC
Confidence 899999999886654
No 185
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.73 E-value=7.5e-14 Score=131.12 Aligned_cols=277 Identities=25% Similarity=0.356 Sum_probs=203.9
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEec-CCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCC-eEEE-ecCCeEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVG-DKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDES-KIVG-LIGTRIC 175 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~-~l~~-~~~~~i~ 175 (422)
......+.+|...|.++.| +++ ++++++. |+.+++|+..++..+..+..|.. +..++++|++. .+++ +.|+.+.
T Consensus 145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 224 (466)
T COG2319 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224 (466)
T ss_pred CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence 4677889999999999999 566 7888875 99999999998888888887544 56699999998 4444 8899999
Q ss_pred EEECCCCceeeecCCCceee-eEEEeeeCCeEEEecCCCeEEEEeCCCcce-eeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 176 IWRRNGLRSVFPSREGTFMK-GLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
+||...+........++... ...+.+.+..+++++.|+.+++|+...... ...+..|...+.++.+.|+ ..+++++.
T Consensus 225 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 304 (466)
T COG2319 225 LWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSS 304 (466)
T ss_pred EEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeC
Confidence 99887555433122222221 225666666788999999999999986664 4444678899999999984 77777888
Q ss_pred CCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEE-eCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 253 LGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 253 dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
|+.+.+||..+.... ..+..+.+.+++..++.+ ..|+.+.+|+............. ..+..+. +++ .
T Consensus 305 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~ 381 (466)
T COG2319 305 DGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVS-FSP-D 381 (466)
T ss_pred CCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCC-ceEEEEE-ECC-C
Confidence 899999998876544 348888883333556655 67889999999877633333322 2277887 666 4
Q ss_pred CEEEE-EecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCE
Q 014590 323 STLVV-GGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMK 399 (422)
Q Consensus 323 ~~l~s-~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~ 399 (422)
..++. +..++.+.+|+............+. ..+....+ ++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~ 425 (466)
T COG2319 382 GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT------------------------------------SRVTSLDFSPDGK 425 (466)
T ss_pred CCEEEEecCCCceEEEecccCeeeeeccCCC------------------------------------CcEEEEEECCCCc
Confidence 44444 6889999999998777666654321 34555555 577
Q ss_pred EEEEEeCCCeEEEEEccC
Q 014590 400 KVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 400 ~l~s~s~Dg~i~iW~~~~ 417 (422)
.+++++.++.+++|+...
T Consensus 426 ~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 426 SLASGSSDNTIRLWDLKT 443 (466)
T ss_pred EEEEecCCCcEEEEeccC
Confidence 888899999999999765
No 186
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.73 E-value=1.2e-16 Score=133.09 Aligned_cols=228 Identities=17% Similarity=0.239 Sum_probs=171.0
Q ss_pred cccceeEEEe----cC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE--EecCCeEEEEECCC
Q 014590 111 HSVGVDQCRM----KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV--GLIGTRICIWRRNG 181 (422)
Q Consensus 111 H~~~v~~v~~----~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~~~~~~i~~w~~~~ 181 (422)
|.+.-..++| .+ + ++|.|+.-|.|+|.|+.++++...+.+|..... +.+.|+...|+ ++.|..|++|++++
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 6777777777 22 3 899999999999999999999999998866544 99999875554 89999999999999
Q ss_pred Ccee--eecCCCceeeeEEEee--eCCeEEEecCCCeEEEEeCCCcceee----------------------------ee
Q 014590 182 LRSV--FPSREGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQ----------------------------II 229 (422)
Q Consensus 182 ~~~~--~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~----------------------------~~ 229 (422)
...+ +.+..+|...++.+.+ .+..+++++.|.++++|++...+... +-
T Consensus 168 ~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~ 247 (385)
T KOG1034|consen 168 DVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTT 247 (385)
T ss_pred CeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccc
Confidence 8854 6677777666666655 55669999999999999997432110 11
Q ss_pred ecCCccEEEEEecCCCEEEEEcCCCcEEEEeC-CCCccc--------------------cceEe--EEEecCCCEEEEEe
Q 014590 230 RMHCAPVTSLSLSEDQLIISGSSLGSIAISGL-SSDQRL--------------------TGIKT--LCYNPCSRLVFAGT 286 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~-~~~~~~--------------------~~v~~--~~~~~~~~~l~~g~ 286 (422)
.-|...|-|+.|- ++++++-|.++.|..|-. +-++.+ ..|.- .+|+|-++.||.|.
T Consensus 248 diHrnyVDCvrw~-gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gn 326 (385)
T KOG1034|consen 248 DIHRNYVDCVRWF-GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGN 326 (385)
T ss_pred ccccchHHHHHHH-hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhcc
Confidence 2344455555553 468999999999999987 212111 33333 45667789999999
Q ss_pred CCCeEEEEECCCCeee--eeecc--CCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 287 TAGYASCWDLRTMKSL--WETRI--SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~~--~~~~~--~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+.|.|++||++..++. .++.. ....|...+ |+.|+..|+..++|++|.-||..
T Consensus 327 q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~s-fS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 327 QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTS-FSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred CCCcEEEEECCCCCCccCceEEeccccceeeeee-ecccCcEEEEEeCCCcEEEEEee
Confidence 9999999999976653 22222 235677887 99999999999999999999864
No 187
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=3.4e-16 Score=131.12 Aligned_cols=181 Identities=16% Similarity=0.238 Sum_probs=143.3
Q ss_pred eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC--C-CEEEEEcCCCcEEEEeCCCCccc----------cceE
Q 014590 205 EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE--D-QLIISGSSLGSIAISGLSSDQRL----------TGIK 271 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~--~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~ 271 (422)
.++++...|+|++||..+++.+..++++...++.+.|.. . +.+.+++.||+|++||++..... .+..
T Consensus 42 ~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~ 121 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFI 121 (376)
T ss_pred eEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcce
Confidence 388999999999999999999999999999999999985 3 78999999999999999987665 3566
Q ss_pred eEEEecCCCEEEEEeC----CCeEEEEECCCCee-eeee-ccCCCceeeeeeEecC-CCEEEEEecCCeEEEEECCCCce
Q 014590 272 TLCYNPCSRLVFAGTT----AGYASCWDLRTMKS-LWET-RISPNVVYSLQHLQND-TSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~----dg~i~iwd~~~~~~-~~~~-~~~~~~v~~l~~~s~~-~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
+++.+-.++.+++|+. +-.|.+||.+..+. +..+ ..|...|+++. |+|. .+.|++||.||.|.+||+.....
T Consensus 122 ~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lr-FHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 122 CLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLR-FHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred EeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEE-ecCCCCCeEEeecccceEEeeecCCCcc
Confidence 6776667888888873 67799999997665 5554 45889999999 7665 46999999999999999874311
Q ss_pred EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--C-EEEEEEeCCCeEEEEEccCCC
Q 014590 345 LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG--M-KKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~-~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
...+.. ...|...|.++.|. + +.|.+-+..++..+|+++.+.
T Consensus 201 eDaL~~---------------------------------viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 201 EDALLH---------------------------------VINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred hhhHHH---------------------------------hhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 111100 02345678999993 2 478899999999999997653
No 188
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.7e-16 Score=141.18 Aligned_cols=185 Identities=18% Similarity=0.298 Sum_probs=133.6
Q ss_pred eEEEeeeCCeEEEecCCCeEEEEeCCC--------cceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCcc
Q 014590 196 GLCMRYFDPEAVVGCEDGTARVFDMYS--------RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR 266 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~d~~i~iwd~~~--------~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 266 (422)
...+.+..+.+++++.||++.+|+++. -+++.++++|.++|.|+++.++ ..+++|+-||+|+.|++....-
T Consensus 299 ~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~d 378 (577)
T KOG0642|consen 299 ALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQD 378 (577)
T ss_pred hhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCC
Confidence 344445556699999999999999932 2478889999999999999866 8999999999999997652211
Q ss_pred c-----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC--Cc----------------
Q 014590 267 L-----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP--NV---------------- 311 (422)
Q Consensus 267 ~-----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~~---------------- 311 (422)
. ..+..+++|+....|++++.||+++.|+.....+ .++.... +.
T Consensus 379 p~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~ 457 (577)
T KOG0642|consen 379 PDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLA 457 (577)
T ss_pred cccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhh
Confidence 1 7888999999999999999999999998775444 1221110 11
Q ss_pred ----------------------------------eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccc
Q 014590 312 ----------------------------------VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASS 357 (422)
Q Consensus 312 ----------------------------------v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 357 (422)
+.-+. ..|...+.+++..|+.|+++|..+++.+.....
T Consensus 458 s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vV-s~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a------- 529 (577)
T KOG0642|consen 458 SFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVV-SHPTADITFTAHEDRSIRFFDNKTGKILHSMVA------- 529 (577)
T ss_pred hcccccccchhhhhhhheeeccccCCCcccccCccceEE-ecCCCCeeEecccCCceecccccccccchheee-------
Confidence 22222 334444555555555555555555555444433
Q ss_pred cCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 358 SSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 358 ~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
|...++++++ +|.+|++++.|+.+++|.++.+
T Consensus 530 -----------------------------~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 530 -----------------------------HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred -----------------------------ccceecceeecCCCceEEeecCCceeehhhccch
Confidence 5568999999 6899999999999999998653
No 189
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.71 E-value=6e-17 Score=140.78 Aligned_cols=194 Identities=13% Similarity=0.173 Sum_probs=163.9
Q ss_pred ceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec
Q 014590 153 AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM 231 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 231 (422)
+...+.++.+|.+++ ++..|.+..+|..++...+...-...+..+.+.....+++++ ....++|||- .|..++-++.
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtElHClk~ 208 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTELHCLKR 208 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcEEeehhh
Confidence 456689999999998 999999999999998877666655555555555444445544 5668999995 5777777775
Q ss_pred CCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 232 HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 232 ~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
| ..|..+.|-|. -+|++++..|.++.-|+.+|+.+ +.+..|+-+|-...+-+|..+|+|.+|.....+++.
T Consensus 209 ~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv 287 (545)
T KOG1272|consen 209 H-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV 287 (545)
T ss_pred c-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH
Confidence 5 56889999998 56778889999999999999988 888899999999999999999999999999999999
Q ss_pred eeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 304 ETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 304 ~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.+..|.++|.+++ +.++|+|++|.+.|..++|||+++-..+.++..
T Consensus 288 KiLcH~g~V~siA-v~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 288 KILCHRGPVSSIA-VDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred HHHhcCCCcceEE-ECCCCcEEeecccccceeEeeeccccccceeec
Confidence 9999999999999 999999999999999999999998776666544
No 190
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.71 E-value=3.7e-16 Score=126.43 Aligned_cols=226 Identities=17% Similarity=0.192 Sum_probs=160.8
Q ss_pred CceeeEEEecCCCeEEEecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee-
Q 014590 152 NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI- 228 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~- 228 (422)
..+.++.|..++..+.+...|.+++|++.+.+.. +.......+..+...+. ..+.+-+.|+.+.+|++..+..+..
T Consensus 15 ~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~ 93 (323)
T KOG0322|consen 15 SSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIH 93 (323)
T ss_pred chheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEe
Confidence 3455677777777666999999999999987744 34333333322222222 3478888888888888754221100
Q ss_pred ------------------------e----------------------------ecCCccEEEEEecC--C--CEEEEEcC
Q 014590 229 ------------------------I----------------------------RMHCAPVTSLSLSE--D--QLIISGSS 252 (422)
Q Consensus 229 ------------------------~----------------------------~~~~~~v~~l~~~~--~--~~l~s~~~ 252 (422)
. .+..+.+.+..+.- + -++++|..
T Consensus 94 Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyE 173 (323)
T KOG0322|consen 94 SIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYE 173 (323)
T ss_pred eeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEecc
Confidence 0 01123455555431 2 26778889
Q ss_pred CCcEEEEeCCCCccc-----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC--Cee--eeeeccCCCc
Q 014590 253 LGSIAISGLSSDQRL-----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT--MKS--LWETRISPNV 311 (422)
Q Consensus 253 dg~i~iwd~~~~~~~-----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--~~~--~~~~~~~~~~ 311 (422)
+|.+.+||+.++..+ .+|.++.+.+.-..=++|+.+..+..|++.. +.+ ..+.......
T Consensus 174 sghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpG 253 (323)
T KOG0322|consen 174 SGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPG 253 (323)
T ss_pred CCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCC
Confidence 999999999987332 8899999987666667788888899998863 221 1222233355
Q ss_pred eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCe
Q 014590 312 VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPI 391 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v 391 (422)
|..+. +-||++.+|+++.|+.||||..+++.++..++.| +..|
T Consensus 254 v~gvr-IRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyH------------------------------------sagv 296 (323)
T KOG0322|consen 254 VSGVR-IRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYH------------------------------------SAGV 296 (323)
T ss_pred ccceE-EccCCcEEeecccCCcEEEEEeccCCchhhhhhh------------------------------------hcce
Confidence 77887 8899999999999999999999999999988664 4589
Q ss_pred EEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 392 TCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 392 ~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
++++| +...++.+|.|++|.+|++
T Consensus 297 n~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 297 NAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eEEEeCCCCchhhhccCCceEEeeec
Confidence 99999 4589999999999999986
No 191
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.71 E-value=5.3e-15 Score=137.86 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=178.0
Q ss_pred CCeEEEEEcCCC-eEEEeeeCCCceeeEEEec-CCCeEE-EecCCeEEEEECCCCcee--------eecCCCceeeeEEE
Q 014590 131 DKVMRLWSLEGY-KCVEEYSLPNAASLVDFDF-DESKIV-GLIGTRICIWRRNGLRSV--------FPSREGTFMKGLCM 199 (422)
Q Consensus 131 dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~~~~i~~w~~~~~~~~--------~~~~~~~~~~~~~~ 199 (422)
++.+.||++... .....+.....+.++.|+| ++..++ |+.+|+|.+||+...... ...|.... ..+.+
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v-~~vvW 299 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPV-TAVVW 299 (555)
T ss_pred CceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCe-EEEEE
Confidence 357999999875 6667788888899999999 455566 888999999999876541 11222222 23333
Q ss_pred eeeCC--eEEEecCCCeEEEEeCCCcce-e-----eeee------cCCccEEEEEecCC--CEEEEEcCCCcEEE---Ee
Q 014590 200 RYFDP--EAVVGCEDGTARVFDMYSRKC-S-----QIIR------MHCAPVTSLSLSED--QLIISGSSLGSIAI---SG 260 (422)
Q Consensus 200 ~~~~~--~l~~~~~d~~i~iwd~~~~~~-~-----~~~~------~~~~~v~~l~~~~~--~~l~s~~~dg~i~i---wd 260 (422)
..... .+++++.||.|..|+++.-.. . .... .....+++++|.+. +.++.|+.+|.|.- ++
T Consensus 300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g 379 (555)
T KOG1587|consen 300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG 379 (555)
T ss_pred eccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence 33222 399999999999998764321 1 1111 11236788999864 78999999999877 33
Q ss_pred CCCCc------c-c-----cceEeEEEecCCCEEEEEeCCCeEEEEECC-CCeeeeeeccCCCceeeeeeEecCCC-EEE
Q 014590 261 LSSDQ------R-L-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLR-TMKSLWETRISPNVVYSLQHLQNDTS-TLV 326 (422)
Q Consensus 261 ~~~~~------~-~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~ 326 (422)
.+... . . +.|.++.++|-+..++..+.|-+++||... ...++..+..+...|++++ |||... .++
T Consensus 380 ~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~va-WSptrpavF~ 458 (555)
T KOG1587|consen 380 YTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVA-WSPTRPAVFA 458 (555)
T ss_pred CcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeE-EcCcCceEEE
Confidence 33333 1 0 899999999988666655559999999988 6778888888888899999 998765 677
Q ss_pred EEecCCeEEEEECCCCc--eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEE
Q 014590 327 VGGIDGVLRVLDQNTGE--VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVV 402 (422)
Q Consensus 327 s~~~dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~ 402 (422)
++..||.+.+||+.... ++.+... +....+.+.| +++.|+
T Consensus 459 ~~d~~G~l~iWDLl~~~~~Pv~s~~~------------------------------------~~~~l~~~~~s~~g~~la 502 (555)
T KOG1587|consen 459 TVDGDGNLDIWDLLQDDEEPVLSQKV------------------------------------CSPALTRVRWSPNGKLLA 502 (555)
T ss_pred EEcCCCceehhhhhccccCCcccccc------------------------------------cccccceeecCCCCcEEE
Confidence 78889999999996432 2222222 1234556666 488999
Q ss_pred EEeCCCeEEEEEcc
Q 014590 403 TTHNSKYIRLWKFN 416 (422)
Q Consensus 403 s~s~Dg~i~iW~~~ 416 (422)
.|...|++.+|++.
T Consensus 503 vGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 503 VGDANGTTHILKLS 516 (555)
T ss_pred EecCCCcEEEEEcC
Confidence 99999999999985
No 192
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.71 E-value=1e-15 Score=135.52 Aligned_cols=195 Identities=16% Similarity=0.133 Sum_probs=158.6
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEec
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNP 277 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~ 277 (422)
++.++.||.+.+.+- .++....+.+|.+.+.+-.|+|+ .-+++++.||.|++|.- +|... .+|.|++|.|
T Consensus 78 ~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p 155 (737)
T KOG1524|consen 78 LLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAP 155 (737)
T ss_pred EEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECC
Confidence 888899999999874 67888888999999999999987 67999999999999984 44433 8999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccc
Q 014590 278 CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASS 357 (422)
Q Consensus 278 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 357 (422)
+.+.++-+. .+.+.|=.+.....+-..+.|.+-|.++. |++....+++|++|-..+|||.. |..+.+-..|.-++..
T Consensus 156 ~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~-W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITS 232 (737)
T KOG1524|consen 156 NSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLS-WSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITS 232 (737)
T ss_pred CCCceEEec-CCeEEEeecccccceeEEeccCcEEEEee-cCccccceeecCCceeEEeeccc-CcccccCChhccceee
Confidence 987666554 34577777776666778899999999999 99999999999999999999976 8888888888888888
Q ss_pred cCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEE
Q 014590 358 SSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 358 ~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~i 412 (422)
+++.+|....++....+. +.....+.|..++| ||..++.|...|.+.+
T Consensus 233 va~npd~~~~v~S~nt~R-------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 233 VAFNPEKDYLLWSYNTAR-------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeeccccceeeeeeeeee-------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 999998433333322221 33445688999999 8999999998887754
No 193
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.71 E-value=1.6e-15 Score=129.35 Aligned_cols=194 Identities=14% Similarity=0.182 Sum_probs=146.9
Q ss_pred EeeccccceeEEEe-c--CCeEEEEecCCeEEEEEcCCC-------eEEEeeeCCCc-eeeEEEecCCCe-EE-EecCCe
Q 014590 107 QWKAHSVGVDQCRM-K--RGLILTGVGDKVMRLWSLEGY-------KCVEEYSLPNA-ASLVDFDFDESK-IV-GLIGTR 173 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~--~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~-l~-~~~~~~ 173 (422)
.+.||+++|..++| + |..+||||.|.+|.||++..+ +.+..+.+|.. +..++|+|.... |+ ++.|++
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 45799999999999 3 449999999999999998764 34555666654 455999996554 44 899999
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccE-EEEEecCC-CEEEEE-
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV-TSLSLSED-QLIISG- 250 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~-~~l~s~- 250 (422)
|.+||+.++..++.......+..++++.++..+++.+.|+.|+|||.++++.+..-.+|.+.- ..+.|-.+ ..+-+|
T Consensus 156 v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGf 235 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGF 235 (472)
T ss_pred EEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeecc
Confidence 999999999977665555666778888899999999999999999999999998887786632 23334444 544333
Q ss_pred --cCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEE-EeCCCeEEEEECCCCe
Q 014590 251 --SSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFA-GTTAGYASCWDLRTMK 300 (422)
Q Consensus 251 --~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~-g~~dg~i~iwd~~~~~ 300 (422)
..+.++-+||..+.+.. ..|.---|.+|.+.+.. |-.|+.|+.|.+.+..
T Consensus 236 sr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 236 SRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred ccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 25788999998765443 45555556777777665 4479999999987654
No 194
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=4.5e-15 Score=133.11 Aligned_cols=222 Identities=11% Similarity=0.133 Sum_probs=163.3
Q ss_pred eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCC
Q 014590 186 FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~ 263 (422)
+.+|.+. +..+.+.+.+..|++|+.||+|+||.+.+|.+++++.. .+.|.|++|+|. ..+++++.+..+.+.+..-
T Consensus 396 yrGHtg~-Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~ 473 (733)
T KOG0650|consen 396 YRGHTGL-VRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIF 473 (733)
T ss_pred EeccCCe-EEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEecCceEEeCccc
Confidence 4445444 34666677778899999999999999999999999874 568999999985 3333333444455555433
Q ss_pred Cccc--------------------------------------------cceEeEEEecCCCEEEEEeCC---CeEEEEEC
Q 014590 264 DQRL--------------------------------------------TGIKTLCYNPCSRLVFAGTTA---GYASCWDL 296 (422)
Q Consensus 264 ~~~~--------------------------------------------~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~ 296 (422)
|..+ ..|..+.|+..|.||++...+ ..|.|+++
T Consensus 474 G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQL 553 (733)
T KOG0650|consen 474 GDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQL 553 (733)
T ss_pred cchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEec
Confidence 3111 678899999999999987653 46899999
Q ss_pred CCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc----------eEEEeeecCCcccccCCCCCCeE
Q 014590 297 RTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE----------VLSRCVMDIGSASSSSNKVSGVI 366 (422)
Q Consensus 297 ~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~----------~~~~~~~~~~~~~~~~~s~d~~i 366 (422)
........|+...+.|.++. |+|...+|+.++.. .|+|||+...+ .+..+..|+..-.++.++.|+.+
T Consensus 554 SK~~sQ~PF~kskG~vq~v~-FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~ 631 (733)
T KOG0650|consen 554 SKRKSQSPFRKSKGLVQRVK-FHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKM 631 (733)
T ss_pred ccccccCchhhcCCceeEEE-ecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCee
Confidence 87666666666668899999 99999999888754 59999987543 45566667777778888888877
Q ss_pred EeeeccccCCCcccccCCCCCCCCeEEEEecC--EEEEEEeCCCeEEEEE
Q 014590 367 ERNEGRRLSAGCCIDRIPKTIRPPITCLAVGM--KKVVTTHNSKYIRLWK 414 (422)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~--~~l~s~s~Dg~i~iW~ 414 (422)
.-.+.. -..+.......|...|++|+|++ .++++|+.||++.|+-
T Consensus 632 ~WfDld---lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 632 CWFDLD---LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred EEEEcc---cCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence 543222 22223334567999999999964 7899999999999874
No 195
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.68 E-value=8.3e-16 Score=136.43 Aligned_cols=210 Identities=16% Similarity=0.178 Sum_probs=149.2
Q ss_pred ccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc--eeeEEEecCCCeEEEecCCeEE
Q 014590 100 EGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA--ASLVDFDFDESKIVGLIGTRIC 175 (422)
Q Consensus 100 ~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~i~ 175 (422)
.+...-++|.||++.|.|+.| .+| +|+|||.|-.+.|||....+.++.+...+. +.++.|-|..+
T Consensus 38 rrL~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tn----------- 106 (758)
T KOG1310|consen 38 RRLDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTN----------- 106 (758)
T ss_pred hhcchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCC-----------
Confidence 334455689999999999999 477 999999999999999998888888765432 23344544211
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC----------cceeeeeecCCccEEEEEecCC-
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS----------RKCSQIIRMHCAPVTSLSLSED- 244 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v~~l~~~~~- 244 (422)
+..+++|+.|..|+++|+.. .+....+..|...|..++..|+
T Consensus 107 ---------------------------nriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~ 159 (758)
T KOG1310|consen 107 ---------------------------NRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNG 159 (758)
T ss_pred ---------------------------CeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCC
Confidence 11267777777777777753 1234445678889999998876
Q ss_pred -CEEEEEcCCCcEEEEeCCCCccc-----------------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCC------
Q 014590 245 -QLIISGSSLGSIAISGLSSDQRL-----------------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTM------ 299 (422)
Q Consensus 245 -~~l~s~~~dg~i~iwd~~~~~~~-----------------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~------ 299 (422)
+.+.+++.||+|+-+|++....- -...++.++|.. .+|++|+.|-..++||.+..
T Consensus 160 PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s 239 (758)
T KOG1310|consen 160 PHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRS 239 (758)
T ss_pred CceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCC
Confidence 79999999999999999874322 567788999865 68899999999999995421
Q ss_pred --e----------eeeee-ccCC--------Cc---eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEe
Q 014590 300 --K----------SLWET-RISP--------NV---VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 300 --~----------~~~~~-~~~~--------~~---v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
. ++.-+ .+|- .. ++-+. |+|+|.-|+..-....|+++|+..++....+
T Consensus 240 ~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt-fnpNGtElLvs~~gEhVYlfdvn~~~~~~~y 311 (758)
T KOG1310|consen 240 DGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT-FNPNGTELLVSWGGEHVYLFDVNEDKSPTPY 311 (758)
T ss_pred CccccCCCCcccchhheecCccccCcccccccceeeeEEEE-ECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence 0 11111 1121 11 34555 8999987666655667999999877655443
No 196
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.67 E-value=1.7e-15 Score=130.49 Aligned_cols=186 Identities=18% Similarity=0.158 Sum_probs=144.6
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------ 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------ 267 (422)
.++++..++..+++|+.||++|+|+..+.+.+.....|.+.|.++.|+|| .++++.+.| ..++|+++++..+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 57778888888999999999999998777777777889999999999998 699999999 9999999999555
Q ss_pred ---cceEeEEEecCC---C--EEEEEeCCCeEEEEECCCCee-----eeeeccCCCceeeeeeEecCCCEEEEEecCCeE
Q 014590 268 ---TGIKTLCYNPCS---R--LVFAGTTAGYASCWDLRTMKS-----LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVL 334 (422)
Q Consensus 268 ---~~v~~~~~~~~~---~--~l~~g~~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v 334 (422)
.....+.|+.|+ . .++....-+.|..||+....- ..+.......|.+++ .+++|++++.|+.||.|
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~-VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLA-VSDDGKFLALGTMDGSV 305 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEE-EcCCCcEEEEeccCCcE
Confidence 445567777666 2 223333455677766653211 112222235799999 99999999999999999
Q ss_pred EEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEE
Q 014590 335 RVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRL 412 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~i 412 (422)
-|++..+.+.++-.+ ..|...|+.+.| |.+++++.+.|..+.|
T Consensus 306 ai~~~~~lq~~~~vk-----------------------------------~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v 350 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVK-----------------------------------EAHLGFVTGLTFSPDSRYLASVSSDNEAAV 350 (398)
T ss_pred EEEEeceeeeeEeeh-----------------------------------hhheeeeeeEEEcCCcCcccccccCCceeE
Confidence 999998776665542 457788999999 6788888999988888
Q ss_pred EEccC
Q 014590 413 WKFNY 417 (422)
Q Consensus 413 W~~~~ 417 (422)
-.+..
T Consensus 351 ~~l~v 355 (398)
T KOG0771|consen 351 TKLAV 355 (398)
T ss_pred EEEee
Confidence 87765
No 197
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.67 E-value=7.3e-15 Score=125.36 Aligned_cols=239 Identities=14% Similarity=0.177 Sum_probs=170.8
Q ss_pred ccccceeEEEe-cCC---eEEEEecCCeEEEEEcCCCeEEEeee-----CCCceeeEEEec-CCCeEEEecCCeEEEEEC
Q 014590 110 AHSVGVDQCRM-KRG---LILTGVGDKVMRLWSLEGYKCVEEYS-----LPNAASLVDFDF-DESKIVGLIGTRICIWRR 179 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~---~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~~i~~w~~ 179 (422)
.-...|.+++| .++ .+...+.|..+....+....+..... ......+..... |+..+.+..+|.+.+|..
T Consensus 53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHD 132 (412)
T ss_pred chhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEec
Confidence 34557788888 333 44444477777777776655544431 111222233333 444555999999999998
Q ss_pred CCCc----eeeecCCCceeeeEEEeeeCCe-EEEecCC--CeEEEEeCCCcceeeeeecC---------CccEEEEEecC
Q 014590 180 NGLR----SVFPSREGTFMKGLCMRYFDPE-AVVGCED--GTARVFDMYSRKCSQIIRMH---------CAPVTSLSLSE 243 (422)
Q Consensus 180 ~~~~----~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d--~~i~iwd~~~~~~~~~~~~~---------~~~v~~l~~~~ 243 (422)
+.+. .+.....+.....+.-....+. +++|+.. ..+.+||+++.+.+..-+.- .-+++++.|-+
T Consensus 133 k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~ 212 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLE 212 (412)
T ss_pred cCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecC
Confidence 7433 1122222222223333334444 6679988 89999999887555443211 12456778875
Q ss_pred C---CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeee-eccCCCc
Q 014590 244 D---QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWE-TRISPNV 311 (422)
Q Consensus 244 ~---~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~ 311 (422)
+ ..|++++.-+.+++||.+.++.. .+++++...|+|+++++|..-|.+..||++.++.... +.+-.+.
T Consensus 213 g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGs 292 (412)
T KOG3881|consen 213 GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGS 292 (412)
T ss_pred CCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCC
Confidence 4 68999999999999999977655 8899999999999999999999999999999988776 8888999
Q ss_pred eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 312 VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
|.++. .+|..++|++++-|..|||+|+++.+.+....
T Consensus 293 irsih-~hp~~~~las~GLDRyvRIhD~ktrkll~kvY 329 (412)
T KOG3881|consen 293 IRSIH-CHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY 329 (412)
T ss_pred cceEE-EcCCCceEEeeccceeEEEeecccchhhhhhh
Confidence 99999 99999999999999999999999876665543
No 198
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.67 E-value=1.8e-14 Score=134.35 Aligned_cols=228 Identities=16% Similarity=0.202 Sum_probs=158.3
Q ss_pred cccceeEEEe-c-C-CeEEEEecCCeEEEEEcCCCeE--EEee---eC--CCceeeEEEecCCC--eEE-EecCCeEEEE
Q 014590 111 HSVGVDQCRM-K-R-GLILTGVGDKVMRLWSLEGYKC--VEEY---SL--PNAASLVDFDFDES--KIV-GLIGTRICIW 177 (422)
Q Consensus 111 H~~~v~~v~~-~-~-~~l~s~~~dg~v~iwd~~~~~~--~~~~---~~--~~~~~~~~~~~~~~--~l~-~~~~~~i~~w 177 (422)
-...|.|+.| + + .+++.|..+|.|.+||+..+.. ...+ .+ ...+..+.|..+.. -++ ++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 3567899999 3 3 3999999999999999987655 2222 22 23333455544333 365 8889999999
Q ss_pred ECCCCcee-----ee--c------CCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc--------eeeeeecCCcc
Q 014590 178 RRNGLRSV-----FP--S------REGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK--------CSQIIRMHCAP 235 (422)
Q Consensus 178 ~~~~~~~~-----~~--~------~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~ 235 (422)
+++.-... .. . ........+.+.+..+. +++|+.+|.|.--+-...+ ....+..|.++
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 87653321 11 1 11222334555555555 9999999999873322211 23355678899
Q ss_pred EEEEEecCC--CEEEEEcCCCcEEEEeCC-CCccc-------cceEeEEEecCC-CEEEEEeCCCeEEEEECCC--Ceee
Q 014590 236 VTSLSLSED--QLIISGSSLGSIAISGLS-SDQRL-------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRT--MKSL 302 (422)
Q Consensus 236 v~~l~~~~~--~~l~s~~~dg~i~iwd~~-~~~~~-------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~--~~~~ 302 (422)
|.++.++|= ..+++++ |.++++|... ....+ ..+++++|||.. ..++++..||.|.+||+.. ..++
T Consensus 401 v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv 479 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPV 479 (555)
T ss_pred eEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCc
Confidence 999999984 5566655 9999999977 44444 569999999977 4677778899999999974 3555
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
.+...+....+.+. ++++|+.|++|...|.+++|++.
T Consensus 480 ~s~~~~~~~l~~~~-~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 480 LSQKVCSPALTRVR-WSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred ccccccccccceee-cCCCCcEEEEecCCCcEEEEEcC
Confidence 55555544455555 88999999999999999999986
No 199
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.67 E-value=6.6e-14 Score=116.56 Aligned_cols=224 Identities=16% Similarity=0.261 Sum_probs=162.4
Q ss_pred eEEEecCCCeEEEecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeE-EEecCC------CeEEEEeCCCccee
Q 014590 156 LVDFDFDESKIVGLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEA-VVGCED------GTARVFDMYSRKCS 226 (422)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l-~~~~~d------~~i~iwd~~~~~~~ 226 (422)
.++|..|...++.+.+...++|+.+--+.. .+...+. ...+.+.+-.+.+ ++|+.+ +.|.|||-...+++
T Consensus 10 svs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G-~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i 88 (346)
T KOG2111|consen 10 SVSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGG-FKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCI 88 (346)
T ss_pred EEEEccCCceEEEEecCceEEEecCchhhhhhhccccCc-hhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEE
Confidence 378888888888888888889887764432 1111121 3344444445553 334333 57999997667777
Q ss_pred eeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCC-Cccc---------cceEeEEEecCCCEEEE-EeCCCeEEEEE
Q 014590 227 QIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSS-DQRL---------TGIKTLCYNPCSRLVFA-GTTAGYASCWD 295 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~-~~~~---------~~v~~~~~~~~~~~l~~-g~~dg~i~iwd 295 (422)
..+. ...+|.++.+.++..+++ .++.|.+|...+ .+.+ ....+++-+.+..+||. |..-|.|.|-|
T Consensus 89 ~el~-f~~~I~~V~l~r~riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~d 165 (346)
T KOG2111|consen 89 IELS-FNSEIKAVKLRRDRIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVD 165 (346)
T ss_pred EEEE-eccceeeEEEcCCeEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEE
Confidence 7775 578999999988766555 467999999874 3333 22333332223334444 34568999999
Q ss_pred CCCCee--eeeeccCCCceeeeeeEecCCCEEEEEecCCe-EEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeecc
Q 014590 296 LRTMKS--LWETRISPNVVYSLQHLQNDTSTLVVGGIDGV-LRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGR 372 (422)
Q Consensus 296 ~~~~~~--~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~ 372 (422)
+...+. ...+..|...|.|++ .+.+|..+||+|..|+ |||||..+|+.++++....+
T Consensus 166 L~~~~~~~p~~I~AH~s~Iacv~-Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d------------------- 225 (346)
T KOG2111|consen 166 LASTKPNAPSIINAHDSDIACVA-LNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD------------------- 225 (346)
T ss_pred hhhcCcCCceEEEcccCceeEEE-EcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc-------------------
Confidence 986544 467889999999999 9999999999999997 69999999999999977544
Q ss_pred ccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 373 RLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...|.+++| +..+|+.+|+-|+|.|+.+...
T Consensus 226 ---------------~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 226 ---------------RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred ---------------hheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 458999999 6899999999999999998753
No 200
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.67 E-value=4.4e-14 Score=136.61 Aligned_cols=265 Identities=17% Similarity=0.162 Sum_probs=175.1
Q ss_pred EEcCCCeEEEeeeCCCcee-eEEEec-CCCeEE-EecCCeEEEEECCCCc--------eeeecCCCceeeeEEEeeeCCe
Q 014590 137 WSLEGYKCVEEYSLPNAAS-LVDFDF-DESKIV-GLIGTRICIWRRNGLR--------SVFPSREGTFMKGLCMRYFDPE 205 (422)
Q Consensus 137 wd~~~~~~~~~~~~~~~~~-~~~~~~-~~~~l~-~~~~~~i~~w~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 205 (422)
|+.. |..+..+..|.... -++.++ ++.+++ ++.||+|++|+..... .......+.....+.++..+..
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 5543 56777766665443 356555 447888 9999999999975421 1122335556667888888888
Q ss_pred EEEecCCCeEEEEeCCCc--c-----eeeeeecC-CccEEEE-EecCC--C-EEEEEcCCCcEEEEeCCCCccc------
Q 014590 206 AVVGCEDGTARVFDMYSR--K-----CSQIIRMH-CAPVTSL-SLSED--Q-LIISGSSLGSIAISGLSSDQRL------ 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~--~-----~~~~~~~~-~~~v~~l-~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~------ 267 (422)
+|.++.||.|++.++... + +......+ .+.+.++ ++... . .++.+..-+.|..||++.....
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 999999999999998652 1 11111112 2333333 33322 3 7888888999999999876554
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-CCCceeeeeeEec---CCCEEEEEe--cCCeEEEEE
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-SPNVVYSLQHLQN---DTSTLVVGG--IDGVLRVLD 338 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~s~---~~~~l~s~~--~dg~v~vwd 338 (422)
+.|++++.+|.+++++.|+..|.+.+||++-+.++..+.. +..++..+. ..| .+...++++ ..+.|.+|+
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~-~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW-LCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE-eeccCCCCceEEEecccCCCceeeee
Confidence 9999999999999999999999999999998887766542 336676665 433 334555444 578899999
Q ss_pred CCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 339 QNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+.+|.+...+....+...+--..+.+ ...+.+.-......+ .+..+.+|+.|+.|+.||..
T Consensus 1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~-----------------~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSN-----------------DARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred cccCcceEEEEcCCCCcchhhhcccc-----------------cCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 99998887776642211110000000 000112212222222 47889999999999999998
Q ss_pred CCCC
Q 014590 417 YSDK 420 (422)
Q Consensus 417 ~~~~ 420 (422)
.++.
T Consensus 1335 ~p~~ 1338 (1431)
T KOG1240|consen 1335 RPEI 1338 (1431)
T ss_pred Cccc
Confidence 7753
No 201
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=3.2e-14 Score=127.16 Aligned_cols=270 Identities=14% Similarity=0.169 Sum_probs=189.2
Q ss_pred eeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCC---ceeeEEEecCCCeEE-EecCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
+++.| +|...-+.+.. +|| .++||-.--.|++||+..-.+ .|.-|- .+.+.-++-|-..++ -..|.+|.+
T Consensus 44 LiQdf-e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSL--KFERhlDae~V~feiLsDD~SK~v~L~~DR~Ief 120 (703)
T KOG2321|consen 44 LIQDF-EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSL--KFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEF 120 (703)
T ss_pred HHHhc-CCccccceeEecCCCcEEEEecccCCceEEEEccccee--eeeecccccceeEEEeccchhhheEeecCceeee
Confidence 33334 37778888888 677 778888888999999976433 233332 223344444555555 666777665
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
-..-+.......+. ....++.+..+-.|+.++....|+-++++.|..+..+....+.++++..++- +++++|+.+|.
T Consensus 121 Hak~G~hy~~RIP~--~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 121 HAKYGRHYRTRIPK--FGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGV 198 (703)
T ss_pred hhhcCeeeeeecCc--CCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCce
Confidence 43322221111111 1123344444445777777788999999999999999888899999999976 89999999999
Q ss_pred EEEEeCCCCccc------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee-ccCCCceeeee
Q 014590 256 IAISGLSSDQRL------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET-RISPNVVYSLQ 316 (422)
Q Consensus 256 i~iwd~~~~~~~------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~ 316 (422)
+..||.+....+ ..|+++.|+.+|-.+++|+.+|.+.|||+++.+++..- .+..-+|..+.
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~ 278 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD 278 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence 999999887655 45999999999999999999999999999998877442 23346788888
Q ss_pred eEecCCC-EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 317 HLQNDTS-TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 317 ~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
|...+++ .+++ .....++|||-.+|+....+... ..++.++
T Consensus 279 ~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEpt-------------------------------------~~lND~C 320 (703)
T KOG2321|consen 279 WQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEPT-------------------------------------SDLNDFC 320 (703)
T ss_pred ccccCCCceEEe-cchHHhhhcccccCCceeecccc-------------------------------------CCcCcee
Confidence 4333333 4444 45667999999999988777542 2456555
Q ss_pred e--cCEEEEEEeCCCeEEEEEcc
Q 014590 396 V--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 396 ~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+ ++.++++|-.++.+..|-++
T Consensus 321 ~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 321 FVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred eecCCceEEEecCCCcceeEEcc
Confidence 5 67888888888777766554
No 202
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.64 E-value=3.7e-15 Score=129.78 Aligned_cols=218 Identities=16% Similarity=0.165 Sum_probs=175.5
Q ss_pred eeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCcee-eecCCC
Q 014590 115 VDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-FPSREG 191 (422)
Q Consensus 115 v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-~~~~~~ 191 (422)
-..+.+ .+| +|+.|+.-|.+-.+|..++++...+...+.+..+.|-.+..+++......+++||-.+-+.- +..+..
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~~~ 211 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRHIR 211 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhcCc
Confidence 355666 466 99999999999999999999999999888888899999999999999999999998765522 222221
Q ss_pred ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---
Q 014590 192 TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--- 267 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--- 267 (422)
+.-+.+.+..-.|++++..|.++--|+.+|+.+..+..-.+.+..++-+|- ..+-+|...|+|.+|.....+.+
T Consensus 212 --v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKi 289 (545)
T KOG1272|consen 212 --VARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKI 289 (545)
T ss_pred --hhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHH
Confidence 123444444555899999999999999999999999888888888888885 68889999999999999888776
Q ss_pred ----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 268 ----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 268 ----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
++|.++++.++|+|+++.+.|..++|||+++...+.++.. ......++ +|..| .|| .+....|.||.
T Consensus 290 LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls-~Sqkg-lLA-~~~G~~v~iw~ 360 (545)
T KOG1272|consen 290 LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLS-LSQKG-LLA-LSYGDHVQIWK 360 (545)
T ss_pred HhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccc-ccccc-cee-eecCCeeeeeh
Confidence 9999999999999999999999999999998776666654 34456666 65544 344 44555699994
No 203
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.63 E-value=3.2e-13 Score=126.72 Aligned_cols=258 Identities=12% Similarity=0.137 Sum_probs=186.0
Q ss_pred ccccceeEEEec-CC-eEEEEecCCeEEEEEcCC--C--eEEEeee-CCCceeeEEEecCCCeEE-EecCCeEEEEECCC
Q 014590 110 AHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEG--Y--KCVEEYS-LPNAASLVDFDFDESKIV-GLIGTRICIWRRNG 181 (422)
Q Consensus 110 ~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~ 181 (422)
.|+-.++|.+++ .+ ++|+|..||.|.+|.--. + .....+. ++..+.+++|+++|.+|+ |+..+.+-+|.+++
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 477778999994 55 999999999999997432 1 1223333 356778899999999999 99999999999999
Q ss_pred CceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec-----------CCccEEEEEecCC-CEEEE
Q 014590 182 LRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-----------HCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----------~~~~v~~l~~~~~-~~l~s 249 (422)
++..+-..-+..+..+.+++++...+....|+.|.+..+.+.+...++.+ ..+-.+.++++|- +.++-
T Consensus 283 ~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vl 362 (792)
T KOG1963|consen 283 GKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVL 362 (792)
T ss_pred CCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceee
Confidence 99887777788777888888998888888899999998766554433322 2344567888885 78888
Q ss_pred EcCCCcEEEEeCCCCccc------------------cceEeEEEecCCCEEEEEe--------CCC--eEEEEECCCCe-
Q 014590 250 GSSLGSIAISGLSSDQRL------------------TGIKTLCYNPCSRLVFAGT--------TAG--YASCWDLRTMK- 300 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~------------------~~v~~~~~~~~~~~l~~g~--------~dg--~i~iwd~~~~~- 300 (422)
.+..|.|.+||+.+...+ ..+++++.+..|.+++++- .|| .+++|-.....
T Consensus 363 n~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~k 442 (792)
T KOG1963|consen 363 NGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSK 442 (792)
T ss_pred cCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcc
Confidence 889999999999877655 4577788888899998874 233 46778665332
Q ss_pred ---eeee-eccCCCceeeeeeEecCCC-EEEEEecCCeEEEEECCC------C----ceEEEeeecCCcccccCCCCCCe
Q 014590 301 ---SLWE-TRISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNT------G----EVLSRCVMDIGSASSSSNKVSGV 365 (422)
Q Consensus 301 ---~~~~-~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~------~----~~~~~~~~~~~~~~~~~~s~d~~ 365 (422)
+... ...|...+...++.++... ..++++.||.++||-+.. . .+...-..|...+..++++.||+
T Consensus 443 t~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGs 522 (792)
T KOG1963|consen 443 TFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGS 522 (792)
T ss_pred eeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCc
Confidence 2222 2457766666654555444 899999999999998732 1 12222223555567777888886
Q ss_pred EE
Q 014590 366 IE 367 (422)
Q Consensus 366 i~ 367 (422)
+.
T Consensus 523 ll 524 (792)
T KOG1963|consen 523 LL 524 (792)
T ss_pred EE
Confidence 64
No 204
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.63 E-value=1.9e-12 Score=117.42 Aligned_cols=182 Identities=15% Similarity=0.090 Sum_probs=131.1
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
++++-..++.|.+.|..+.+.+.++....... .+.+++||++++ ++.||.|.++|+.+.+.+-....+.....+++++
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~ 87 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSP 87 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--
T ss_pred EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcC
Confidence 44566678999999999999999998765543 478999999987 8889999999999999776667777777899999
Q ss_pred eCCeEEEe-cCCCeEEEEeCCCcceeeeeecC-------CccEEEEEecCC-CEEE-EEcCCCcEEEEeCCCCccc----
Q 014590 202 FDPEAVVG-CEDGTARVFDMYSRKCSQIIRMH-------CAPVTSLSLSED-QLII-SGSSLGSIAISGLSSDQRL---- 267 (422)
Q Consensus 202 ~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~l~~~~~-~~l~-s~~~dg~i~iwd~~~~~~~---- 267 (422)
++.+++++ ...+.+.++|.++.+.++.+... ...+..+..+|. ..++ +.-..+.|.+.|..+.+.+
T Consensus 88 DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~ 167 (369)
T PF02239_consen 88 DGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTT 167 (369)
T ss_dssp TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEE
T ss_pred CCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceee
Confidence 99996655 56899999999999998887533 345677777766 5444 4445588988898776544
Q ss_pred ----cceEeEEEecCCCEEEEE-eCCCeEEEEECCCCeeeeee
Q 014590 268 ----TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 268 ----~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~ 305 (422)
.......|+|++++++++ ..++.|.++|..+++.+..+
T Consensus 168 i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i 210 (369)
T PF02239_consen 168 IKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALI 210 (369)
T ss_dssp EE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred ecccccccccccCcccceeeecccccceeEEEeeccceEEEEe
Confidence 566778999999987665 46778999999887766543
No 205
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=5.8e-14 Score=131.50 Aligned_cols=215 Identities=13% Similarity=0.073 Sum_probs=146.6
Q ss_pred CCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecC---CeEEEEECCCCce-eeecCCCceeeeEEEeeeCC
Q 014590 131 DKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIG---TRICIWRRNGLRS-VFPSREGTFMKGLCMRYFDP 204 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~---~~i~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 204 (422)
+..|.+||..... ...+.. ...+...+|+|||+.++ ++.+ ..|++||+.++.. .+....++. ....+++++.
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~-~~~~wSPDG~ 260 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN-GAPAFSPDGS 260 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc-CceeECCCCC
Confidence 4689999987554 344444 33456699999999998 4432 4799999988753 233333332 3567888888
Q ss_pred eEEEe-cCCCeEEE--EeCCCcceeeeeecCCccEEEEEecCC-CEEEE-EcCCCcEEEEeCCC--Cccc----cceEeE
Q 014590 205 EAVVG-CEDGTARV--FDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS-GSSLGSIAISGLSS--DQRL----TGIKTL 273 (422)
Q Consensus 205 ~l~~~-~~d~~i~i--wd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s-~~~dg~i~iwd~~~--~~~~----~~v~~~ 273 (422)
.|+.+ +.+|.+.| ||+.+++. ..+..+...+....|+|+ +.++. +..+|...+|++.. +... .. ...
T Consensus 261 ~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~-~~~ 338 (429)
T PRK01742 261 RLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG-YSA 338 (429)
T ss_pred EEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC-CCc
Confidence 87765 46776555 46666554 445556677888999987 55554 44678888887643 2211 12 457
Q ss_pred EEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC--CCCceEEEeeec
Q 014590 274 CYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ--NTGEVLSRCVMD 351 (422)
Q Consensus 274 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~--~~~~~~~~~~~~ 351 (422)
+|+|||++++.++.++ +.+||+.+++.......+ ...++. |+|+|++|+.++.+|.+.+|++ .+|+....+..+
T Consensus 339 ~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~-~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~ 414 (429)
T PRK01742 339 QISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPS-ISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGS 414 (429)
T ss_pred cCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCce-ECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCC
Confidence 8999999999888765 666999887654322222 235667 9999999999999998888875 357778887655
Q ss_pred CC
Q 014590 352 IG 353 (422)
Q Consensus 352 ~~ 353 (422)
.+
T Consensus 415 ~g 416 (429)
T PRK01742 415 DG 416 (429)
T ss_pred CC
Confidence 44
No 206
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.62 E-value=6.3e-13 Score=120.69 Aligned_cols=234 Identities=9% Similarity=0.036 Sum_probs=151.3
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEE-ecCCeEEEEEcC-CCeE--EEeeeCCCceeeEEEecCCCeEE-E-ecCCeEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTG-VGDKVMRLWSLE-GYKC--VEEYSLPNAASLVDFDFDESKIV-G-LIGTRIC 175 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~-~~dg~v~iwd~~-~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~ 175 (422)
.+.++. +.+....+++ +++ +|+.+ ..++.|.+|++. +++. +...........++++|+++.++ + ..++.|.
T Consensus 27 ~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~ 105 (330)
T PRK11028 27 LLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVS 105 (330)
T ss_pred eeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEE
Confidence 444554 3455677888 566 66554 458899999986 3432 33333333456699999999988 3 3479999
Q ss_pred EEECCCCce---eeecC-CCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCcceee-------eeecCCccEEEEEecC
Q 014590 176 IWRRNGLRS---VFPSR-EGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQ-------IIRMHCAPVTSLSLSE 243 (422)
Q Consensus 176 ~w~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~-------~~~~~~~~v~~l~~~~ 243 (422)
+|++++... ..... .......+++.+++..+ ++...++.|.+||+.+...+. .... ......++|+|
T Consensus 106 v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~p 184 (330)
T PRK11028 106 VSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHP 184 (330)
T ss_pred EEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECC
Confidence 999874321 11111 11122345667777775 556667999999997632221 1111 23456889998
Q ss_pred C-CEEEEEcC-CCcEEEEeCCC--Ccc--c-------------cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeee
Q 014590 244 D-QLIISGSS-LGSIAISGLSS--DQR--L-------------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLW 303 (422)
Q Consensus 244 ~-~~l~s~~~-dg~i~iwd~~~--~~~--~-------------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~ 303 (422)
+ ++++++.. +++|.+|++.. ++. + .....+.++|+|++++++.. ++.|.+|++.......
T Consensus 185 dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~ 264 (330)
T PRK11028 185 NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVL 264 (330)
T ss_pred CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeE
Confidence 7 67766655 89999999973 222 1 11225889999999999864 7889999986432211
Q ss_pred eeccCC---CceeeeeeEecCCCEEEEEec-CCeEEEEECC
Q 014590 304 ETRISP---NVVYSLQHLQNDTSTLVVGGI-DGVLRVLDQN 340 (422)
Q Consensus 304 ~~~~~~---~~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~ 340 (422)
++.++. .....+. ++|+|++|+++.. +++|.+|++.
T Consensus 265 ~~~~~~~~~~~p~~~~-~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 265 SFEGHQPTETQPRGFN-IDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEeEEEeccccCCceE-ECCCCCEEEEEEccCCcEEEEEEc
Confidence 222221 2345677 9999999998775 8999999874
No 207
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=1.3e-14 Score=125.19 Aligned_cols=182 Identities=17% Similarity=0.176 Sum_probs=122.9
Q ss_pred eEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee-CCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCC
Q 014590 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS-LPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREG 191 (422)
Q Consensus 116 ~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~ 191 (422)
.+++| .+| .|++|+.||++|||+....+.+.... ++..+..+.|+|||+.|+ .+.| ...+|+++++..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~------- 219 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAA------- 219 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCch-------
Confidence 67788 455 99999999999999977666554444 455667799999998876 4444 666666655532
Q ss_pred ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--CCccEEEEEecCCC-----E-EEEEcCCCcEEEEeCCC
Q 014590 192 TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--HCAPVTSLSLSEDQ-----L-IISGSSLGSIAISGLSS 263 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~~-----~-l~s~~~dg~i~iwd~~~ 263 (422)
+..... -......+.|+.++ + ++.....+.|+.||+..
T Consensus 220 ----------------------------------~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~ 265 (398)
T KOG0771|consen 220 ----------------------------------LARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISL 265 (398)
T ss_pred ----------------------------------hhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeee
Confidence 221110 00111122222111 1 11112223333333221
Q ss_pred ---------Cccc---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee-ccCCCceeeeeeEecCCCEEEEEec
Q 014590 264 ---------DQRL---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET-RISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 264 ---------~~~~---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
.+.+ ..|.+++.+++|++++.|+.||.|.|++..+.+.++-. +.|...|+.+. |+|+.+++++-+.
T Consensus 266 w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~lt-F~Pdsr~~~svSs 344 (398)
T KOG0771|consen 266 WSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLT-FSPDSRYLASVSS 344 (398)
T ss_pred eccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEE-EcCCcCccccccc
Confidence 1111 68999999999999999999999999999988776544 56899999999 9999999999999
Q ss_pred CCeEEEEECC
Q 014590 331 DGVLRVLDQN 340 (422)
Q Consensus 331 dg~v~vwd~~ 340 (422)
|....|..+.
T Consensus 345 ~~~~~v~~l~ 354 (398)
T KOG0771|consen 345 DNEAAVTKLA 354 (398)
T ss_pred CCceeEEEEe
Confidence 9988888765
No 208
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=7.2e-14 Score=130.87 Aligned_cols=210 Identities=11% Similarity=-0.011 Sum_probs=143.5
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecC---CeEEEEEcCCCeE--EEeeeCCCceeeEEEecCCCeEE-E-ecCCeEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGD---KVMRLWSLEGYKC--VEEYSLPNAASLVDFDFDESKIV-G-LIGTRIC 175 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~d---g~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~ 175 (422)
.+.+..|...+.+..| +|| .|+.++.+ ..|.+||+.+++. +..+.+ .....+|+|||+.|+ + ..+|.+.
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g--~~~~~~wSPDG~~La~~~~~~g~~~ 273 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG--HNGAPAFSPDGSRLAFASSKDGVLN 273 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC--ccCceeECCCCCEEEEEEecCCcEE
Confidence 4556778888999999 577 77776653 3799999988754 333333 234589999999988 4 3577655
Q ss_pred E--EECCCCceeeecCCCceeeeEEEeeeCCeEEEe-cCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEE
Q 014590 176 I--WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 176 ~--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
+ ||+.++................+.+++..++.+ ..++...||++... .....+ .+.. ....|+|+ +.++.+
T Consensus 274 Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~ 350 (429)
T PRK01742 274 IYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMI 350 (429)
T ss_pred EEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEE
Confidence 5 566665533222222334467788888876544 45788888876432 222222 3333 45778987 777777
Q ss_pred cCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECC--CCeeeeeeccCCCceeeeeeEecC
Q 014590 251 SSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLR--TMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
+.++ +.+||+.+++.. .....++|+|+|++|+.++.++.+.+|++. +++...++..|.+.+...+ |+|-
T Consensus 351 ~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~-wsp~ 426 (429)
T PRK01742 351 NGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPA-WSPY 426 (429)
T ss_pred cCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcc-cCCC
Confidence 6654 566999887643 234567899999999999999988887753 5778888888888888888 8774
No 209
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.62 E-value=2.6e-13 Score=113.14 Aligned_cols=224 Identities=13% Similarity=0.099 Sum_probs=164.4
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC---eEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
..+.--.++|+|.+| +|+ .+|.+-....|.||..... +..+++..|... ..++|+|..+.|+ ++.|..-++|.
T Consensus 4 ~~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 4 VVFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT 83 (361)
T ss_pred EEeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence 344445679999999 466 8899988899999987664 466777777554 5599999999999 99999999999
Q ss_pred C-CCCc----eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee----eeeecCCccEEEEEecCC-CEEE
Q 014590 179 R-NGLR----SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS----QIIRMHCAPVTSLSLSED-QLII 248 (422)
Q Consensus 179 ~-~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~v~~l~~~~~-~~l~ 248 (422)
. +++. .++..+ +.....+.+++..+.+++|+....|.||-.+..+-- +.-+.+...|.+++|+|+ -+++
T Consensus 84 ~~~~~~WkptlvLlRi-NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLla 162 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRI-NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLA 162 (361)
T ss_pred cCCCCeeccceeEEEe-ccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceec
Confidence 8 4443 223333 334457888888888999999999999988654322 122456778999999987 5888
Q ss_pred EEcCCCcEEEEeCCCCc------------cc-------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe-ee
Q 014590 249 SGSSLGSIAISGLSSDQ------------RL-------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK-SL 302 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~------------~~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~ 302 (422)
+|+.|+..++|..--.. .. +.+..+.|+|+|+.|+-.+.|+.+.+-|..... .+
T Consensus 163 aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v 242 (361)
T KOG1523|consen 163 AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERV 242 (361)
T ss_pred ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhc
Confidence 89999999998642110 00 789999999999999999999999999877543 34
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCC
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDG 332 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg 332 (422)
..+....-+..++.|.+ .+.++.++.|.
T Consensus 243 ~~~~~~~lP~ls~~~is--e~~vv~ag~~c 270 (361)
T KOG1523|consen 243 QSVATAQLPLLSVSWIS--ENSVVAAGYDC 270 (361)
T ss_pred cchhhccCCceeeEeec--CCceeecCCCC
Confidence 44433336667777433 23455566663
No 210
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.60 E-value=2.5e-12 Score=116.69 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=159.8
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~ 178 (422)
+.+.++....+.-..+.| +|| ++++++.||.|.++|+.+++.+.++........+++++||++++ ....+.+.++|
T Consensus 27 ~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D 106 (369)
T PF02239_consen 27 KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVID 106 (369)
T ss_dssp SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEec
Confidence 456667655444344667 567 88888999999999999999999999988888899999999998 44689999999
Q ss_pred CCCCceeeecCCC------ceee--eEEEeeeCCeEEEe-cCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEE
Q 014590 179 RNGLRSVFPSREG------TFMK--GLCMRYFDPEAVVG-CEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLI 247 (422)
Q Consensus 179 ~~~~~~~~~~~~~------~~~~--~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l 247 (422)
.++.+.+.....+ .... .+...+..+.++.. -..+.|-+.|....+.+.. ...-........|+|+ +++
T Consensus 107 ~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~ 186 (369)
T PF02239_consen 107 AETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYF 186 (369)
T ss_dssp TTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEE
T ss_pred cccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCccccee
Confidence 9998755322211 1112 22233455544444 4458888888766543322 2223445678888887 655
Q ss_pred EE-EcCCCcEEEEeCCCCccc-----------------------------------------------------------
Q 014590 248 IS-GSSLGSIAISGLSSDQRL----------------------------------------------------------- 267 (422)
Q Consensus 248 ~s-~~~dg~i~iwd~~~~~~~----------------------------------------------------------- 267 (422)
++ ...+..|-++|..+++..
T Consensus 187 ~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~ 266 (369)
T PF02239_consen 187 LVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIP 266 (369)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE
T ss_pred eecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEE
Confidence 44 455668888888776543
Q ss_pred --cceEeEEEecCCCEEEEE----eCCCeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEEec--CCeEEEEE
Q 014590 268 --TGIKTLCYNPCSRLVFAG----TTAGYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVGGI--DGVLRVLD 338 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g----~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~--dg~v~vwd 338 (422)
+.-.-+..+|+++++++. ...+.|.++|.++.+.+.++.... ..+..+. |+++|+.+..+.. ++.|.|||
T Consensus 267 ~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~e-f~~dG~~v~vS~~~~~~~i~v~D 345 (369)
T PF02239_consen 267 TQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHME-FNPDGKEVWVSVWDGNGAIVVYD 345 (369)
T ss_dssp -SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEE-E-TTSSEEEEEEE--TTEEEEEE
T ss_pred CCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccE-ECCCCCEEEEEEecCCCEEEEEE
Confidence 222556778999999998 455889999999998877775332 3588898 9999997665554 34799999
Q ss_pred CCCCceEEEeee
Q 014590 339 QNTGEVLSRCVM 350 (422)
Q Consensus 339 ~~~~~~~~~~~~ 350 (422)
..+.+.+..+..
T Consensus 346 ~~Tl~~~~~i~~ 357 (369)
T PF02239_consen 346 AKTLKEKKRIPV 357 (369)
T ss_dssp TTTTEEEEEEE-
T ss_pred CCCcEEEEEEEe
Confidence 999999998873
No 211
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.60 E-value=1.9e-13 Score=113.87 Aligned_cols=191 Identities=15% Similarity=0.168 Sum_probs=153.9
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCc-----eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC-Cc
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR-----SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-SR 223 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~ 223 (422)
.+.+.+.+|++|+..++ +..+..+.||...+.. ..+..|... +..+++.+..+.|++++.|..-++|... .+
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~-vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKI-VTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcc-eeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 35678899999999999 7777899999987766 234444444 4568999999999999999999999983 33
Q ss_pred --ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCcc----------c-cceEeEEEecCCCEEEEEeCCC
Q 014590 224 --KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR----------L-TGIKTLCYNPCSRLVFAGTTAG 289 (422)
Q Consensus 224 --~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~----------~-~~v~~~~~~~~~~~l~~g~~dg 289 (422)
++.-.+..+....+++.|+|. +.|++|+....|.+|-++.... + +.|++++|+|++-++++|+.|+
T Consensus 89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~ 168 (361)
T KOG1523|consen 89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG 168 (361)
T ss_pred eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCc
Confidence 345556678899999999987 8999999999999987754321 1 8899999999999999999999
Q ss_pred eEEEEECC-----C-------------CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 290 YASCWDLR-----T-------------MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 290 ~i~iwd~~-----~-------------~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
..++|..- . |+++.++....+.+..+. |+|+|..|+-.+.|+.+.+=|.....
T Consensus 169 k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~-fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 169 KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVL-FSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeE-eCCCCCEeeEecCCCceEEeecCCCc
Confidence 99998542 1 234445555668899999 99999999999999999999876443
No 212
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.60 E-value=5.3e-14 Score=115.64 Aligned_cols=182 Identities=15% Similarity=0.184 Sum_probs=131.5
Q ss_pred cCCccEEEEEecCCC------EEEEEcCCCcEEEEeCCCCcc--c--------------cceEeEEEec-CCCEEEEEeC
Q 014590 231 MHCAPVTSLSLSEDQ------LIISGSSLGSIAISGLSSDQR--L--------------TGIKTLCYNP-CSRLVFAGTT 287 (422)
Q Consensus 231 ~~~~~v~~l~~~~~~------~l~s~~~dg~i~iwd~~~~~~--~--------------~~v~~~~~~~-~~~~l~~g~~ 287 (422)
.|.-+++.+-|.|+. ++++. +..+++|.+...+. . .++++..|+. +-+++.+.+-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 578899999999862 45443 45899999874221 1 7888988875 5578999999
Q ss_pred CCeEEEEECCCCee---eeeeccCCCceeeeeeEecCC-CEEEEEecCCeEEEEECCCCceEEEeeecCC----------
Q 014590 288 AGYASCWDLRTMKS---LWETRISPNVVYSLQHLQNDT-STLVVGGIDGVLRVLDQNTGEVLSRCVMDIG---------- 353 (422)
Q Consensus 288 dg~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------- 353 (422)
|-+..|||+.++.. ...+-.|...|+.++ |...+ +.+|+.+.||.||+||++..+.-..+...+.
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa-f~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA-FLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEE-eccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeecc
Confidence 99999999998633 556788999999999 76654 4889999999999999997665444433322
Q ss_pred ----cccccCCCCCC-eEEeeeccccCCCcccccCCCCCCCCeEEEEe---cCEEEEEEeCCCeEEEEEccCC
Q 014590 354 ----SASSSSNKVSG-VIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 354 ----~~~~~~~s~d~-~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
..+++++..|. .|.+.+... +.....-..+|.+.|++|+| ....|+|+|+|..+.+||+++.
T Consensus 251 nkqDpnymATf~~dS~~V~iLDiR~---P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 251 NKQDPNYMATFAMDSNKVVILDIRV---PCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred CcCCchHHhhhhcCCceEEEEEecC---CCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 11344444443 233222221 11112224779999999999 5799999999999999999864
No 213
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.59 E-value=2.3e-13 Score=116.80 Aligned_cols=240 Identities=15% Similarity=0.214 Sum_probs=164.8
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcC--------C--------CeEEEeeeCCCce-eeEEEecCC
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE--------G--------YKCVEEYSLPNAA-SLVDFDFDE 163 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~--------~--------~~~~~~~~~~~~~-~~~~~~~~~ 163 (422)
.....|..|..+|+++.| ++| .||||+.+|.|.+|... + ....+.+.+|... .-++|++++
T Consensus 56 ~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~ 135 (434)
T KOG1009|consen 56 EYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS 135 (434)
T ss_pred EEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC
Confidence 345678899999999999 566 99999999999999876 2 1233444555444 449999999
Q ss_pred CeEE-EecCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee-----------
Q 014590 164 SKIV-GLIGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR----------- 230 (422)
Q Consensus 164 ~~l~-~~~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------- 230 (422)
..++ ++.|+.+++||+..+... ......+.+..+++.+.+.++++-+.|...+.+.+...+.++...
T Consensus 136 ~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 215 (434)
T KOG1009|consen 136 NFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNE 215 (434)
T ss_pred ceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCC
Confidence 9998 999999999999998854 344556667788898888888888888866666654332221110
Q ss_pred --------cCC----ccEEEEEecCC-CEEEEEcC----CC-----cEEEEeCCCCccc--------cceEeEEEe----
Q 014590 231 --------MHC----APVTSLSLSED-QLIISGSS----LG-----SIAISGLSSDQRL--------TGIKTLCYN---- 276 (422)
Q Consensus 231 --------~~~----~~v~~l~~~~~-~~l~s~~~----dg-----~i~iwd~~~~~~~--------~~v~~~~~~---- 276 (422)
.|. .....++|+|+ .++++.+. ++ +.++++-...+.. .+...+.|+
T Consensus 216 ~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~ 295 (434)
T KOG1009|consen 216 REGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYY 295 (434)
T ss_pred CCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEE
Confidence 111 13355778887 45554421 22 2244432221111 233333333
Q ss_pred --------------cCCCEEEEEeCCCeEEEEECCCCeeeeeec-cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 277 --------------PCSRLVFAGTTAGYASCWDLRTMKSLWETR-ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 277 --------------~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
|.+-.+|+++.+ .|++||..+..++.... .|-..++.++ |+++|..|+..|.||...+-.++.
T Consensus 296 elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~nihy~~iTDia-ws~dg~~l~vSS~DGyCS~vtfe~ 373 (434)
T KOG1009|consen 296 ELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNIHYSAITDIA-WSDDGSVLLVSSTDGFCSLVTFEP 373 (434)
T ss_pred EeccccccccccccccceEEEEeecc-eEEEeccccccceEEEeeeeeeeeccee-ecCCCcEEEEeccCCceEEEEEcc
Confidence 333456666655 59999999988887654 4778999999 999999999999999888877765
Q ss_pred Cce
Q 014590 342 GEV 344 (422)
Q Consensus 342 ~~~ 344 (422)
.+.
T Consensus 374 ~el 376 (434)
T KOG1009|consen 374 WEL 376 (434)
T ss_pred hhc
Confidence 443
No 214
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.58 E-value=7.3e-12 Score=115.91 Aligned_cols=258 Identities=18% Similarity=0.137 Sum_probs=172.2
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeE
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGL 197 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 197 (422)
...++.++.++.+|.+..+|..+|+.+..+..+..... ....++..++ ++.++.+..+|.++++.++......... .
T Consensus 62 ~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~-~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~-~ 139 (377)
T TIGR03300 62 AVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSG-GVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVL-S 139 (377)
T ss_pred EEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCccc-ceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceee-c
Confidence 34577888999999999999999999988776544322 1122445554 8889999999999988775544332211 1
Q ss_pred EEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEE-----EEEecCCCEEEEEcCCCcEEEEeCCCCccc--cce
Q 014590 198 CMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVT-----SLSLSEDQLIISGSSLGSIAISGLSSDQRL--TGI 270 (422)
Q Consensus 198 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-----~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~v 270 (422)
.....+..++.++.++.+..+|.++|+.+..+......+. +... .++.++.+..++.+..+|.++|+.+ ..+
T Consensus 140 ~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~-~~~~v~~~~~~g~v~ald~~tG~~~W~~~~ 218 (377)
T TIGR03300 140 PPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI-ADGGVLVGFAGGKLVALDLQTGQPLWEQRV 218 (377)
T ss_pred CCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecc
Confidence 1112345678888899999999999998887654332211 1111 1357788888999999999988765 000
Q ss_pred ------------EeEEEec--CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 271 ------------KTLCYNP--CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 271 ------------~~~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
..+.-+| .+..+++++.+|.++.+|..+++.++...... ..... ..+..++.++.||.+..
T Consensus 219 ~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~--~~~p~---~~~~~vyv~~~~G~l~~ 293 (377)
T TIGR03300 219 ALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS--YQGPA---VDDNRLYVTDADGVVVA 293 (377)
T ss_pred ccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC--ccCce---EeCCEEEEECCCCeEEE
Confidence 0000011 35678888889999999999998887765221 22222 34677888889999999
Q ss_pred EECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEcc
Q 014590 337 LDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 337 wd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+|..+|+.+.....-.. ....+....+..|++++.||.|.++|..
T Consensus 294 ~d~~tG~~~W~~~~~~~-----------------------------------~~~ssp~i~g~~l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 294 LDRRSGSELWKNDELKY-----------------------------------RQLTAPAVVGGYLVVGDFEGYLHWLSRE 338 (377)
T ss_pred EECCCCcEEEccccccC-----------------------------------CccccCEEECCEEEEEeCCCEEEEEECC
Confidence 99999987765522111 0111222345677788888888888877
Q ss_pred CCC
Q 014590 417 YSD 419 (422)
Q Consensus 417 ~~~ 419 (422)
+++
T Consensus 339 tG~ 341 (377)
T TIGR03300 339 DGS 341 (377)
T ss_pred CCC
Confidence 664
No 215
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.58 E-value=4.9e-12 Score=117.03 Aligned_cols=227 Identities=16% Similarity=0.144 Sum_probs=152.9
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCcee----e
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFM----K 195 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~----~ 195 (422)
..++.++.++.++.+..+|..+|+.+................++..+++..++.+..+|.++++.++........ .
T Consensus 103 v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~ 182 (377)
T TIGR03300 103 ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRG 182 (377)
T ss_pred EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecC
Confidence 345678888899999999999999988776654332211222444445888999999999988866543322110 0
Q ss_pred eEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-------cEEEEEec---CCCEEEEEcCCCcEEEEeCCCCc
Q 014590 196 GLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA-------PVTSLSLS---EDQLIISGSSLGSIAISGLSSDQ 265 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~l~~~---~~~~l~s~~~dg~i~iwd~~~~~ 265 (422)
.......+..++.+..++.+..+|.++|+.+........ ....+.-+ .++.++.++.+|.+..+|..+|+
T Consensus 183 ~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~ 262 (377)
T TIGR03300 183 SASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGR 262 (377)
T ss_pred CCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCc
Confidence 011112334678888899999999999987765431100 00011111 24678888889999999999998
Q ss_pred cc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 266 RL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 266 ~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
.+ ....... .++..+++++.+|.+..+|..+++.+.+..... ....+.. . .+..|++++.+|.|+++|.
T Consensus 263 ~~W~~~~~~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~-i--~g~~l~~~~~~G~l~~~d~ 337 (377)
T TIGR03300 263 VLWKRDASSYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPA-V--VGGYLVVGDFEGYLHWLSR 337 (377)
T ss_pred EEEeeccCCccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCE-E--ECCEEEEEeCCCEEEEEEC
Confidence 76 1111222 356788888899999999999998887663222 2222222 2 4668999999999999999
Q ss_pred CCCceEEEeeec
Q 014590 340 NTGEVLSRCVMD 351 (422)
Q Consensus 340 ~~~~~~~~~~~~ 351 (422)
.+|+.+.++..+
T Consensus 338 ~tG~~~~~~~~~ 349 (377)
T TIGR03300 338 EDGSFVARLKTD 349 (377)
T ss_pred CCCCEEEEEEcC
Confidence 999999888654
No 216
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.58 E-value=2.6e-13 Score=116.04 Aligned_cols=211 Identities=13% Similarity=0.175 Sum_probs=162.4
Q ss_pred eEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCC----eEEEeeeCCCceeeEEEecCCCeEE--EecC--CeEEE
Q 014590 105 IDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY----KCVEEYSLPNAASLVDFDFDESKIV--GLIG--TRICI 176 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~--~~i~~ 176 (422)
+....+-+++|..++..||.|++|-.+|.+.+|..+.+ ..+..+..+.+...+.-++....++ |+.. ..+.+
T Consensus 98 ~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lki 177 (412)
T KOG3881|consen 98 AKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKI 177 (412)
T ss_pred ccccccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceee
Confidence 33556677788888888999999999999999998843 3344455555666677777655555 6666 78999
Q ss_pred EECCCCceeeecCCC--------ceeeeEEEeeeCC----eEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecC
Q 014590 177 WRRNGLRSVFPSREG--------TFMKGLCMRYFDP----EAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSE 243 (422)
Q Consensus 177 w~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~ 243 (422)
||+++.++++....- ..+....+.+..+ .+++++.-+.+++||++.+ +++..+..-..++.++...|
T Consensus 178 wdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p 257 (412)
T KOG3881|consen 178 WDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTP 257 (412)
T ss_pred eecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecC
Confidence 999998777654321 1223333333322 3999999999999999866 47788877788999999998
Q ss_pred C-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceee
Q 014590 244 D-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYS 314 (422)
Q Consensus 244 ~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 314 (422)
+ +++++|..-|.+..||++.++.. +.|.++..+|.+.++++++-|..|+|+|+.+.+++..... ...+++
T Consensus 258 ~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt~ 336 (412)
T KOG3881|consen 258 SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLTF 336 (412)
T ss_pred CCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh-hccccE
Confidence 7 89999999999999999998877 8999999999999999999999999999998766654432 234555
Q ss_pred ee
Q 014590 315 LQ 316 (422)
Q Consensus 315 l~ 316 (422)
+.
T Consensus 337 il 338 (412)
T KOG3881|consen 337 IL 338 (412)
T ss_pred EE
Confidence 55
No 217
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.57 E-value=1.2e-13 Score=122.54 Aligned_cols=197 Identities=18% Similarity=0.136 Sum_probs=151.2
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
.|+.++.||.+.+-+- .++....+..|.+. .+-.|+|||.-|+ ++.||.|++|...+.........+..+.+.+|.+
T Consensus 77 ~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p 155 (737)
T KOG1524|consen 77 TLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAP 155 (737)
T ss_pred eEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECC
Confidence 7888889999999874 46777777777554 4488999999999 9999999999987765444445566667788888
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEE
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLC 274 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~ 274 (422)
+++.++-+. .+.+.|=-+.....+-..++|.+-|.++.|++. +++++|+.|-..++||....... .+|++++
T Consensus 156 ~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva 234 (737)
T KOG1524|consen 156 NSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVA 234 (737)
T ss_pred CCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeee
Confidence 877755443 345666566556566677899999999999975 89999999999999997543332 8999999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
|+|+ ..++.++.+ ++++ -....+.|..++ ||+||..+++|+..|.+.+
T Consensus 235 ~npd-~~~~v~S~n-t~R~-----------~~p~~GSifnls-WS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 235 FNPE-KDYLLWSYN-TARF-----------SSPRVGSIFNLS-WSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eccc-cceeeeeee-eeee-----------cCCCccceEEEE-EcCCCceeeccccCceEEE
Confidence 9999 666666643 3331 122347899999 9999999999999998754
No 218
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.57 E-value=1.5e-13 Score=122.02 Aligned_cols=93 Identities=13% Similarity=0.293 Sum_probs=83.7
Q ss_pred eeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 226 SQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 226 ~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
+..+..-.+.|+..+|+|| .++++.+.||.++|||..+.+.+ +...|++|||||++|++|++|.-|.||.+.
T Consensus 283 v~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 283 VARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred cceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence 3333334568999999987 89999999999999999988777 899999999999999999999999999999
Q ss_pred CCeeeeeeccCCCceeeeeeEe
Q 014590 298 TMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 298 ~~~~~~~~~~~~~~v~~l~~~s 319 (422)
..+.+..-++|+.+|..++ |+
T Consensus 363 erRVVARGqGHkSWVs~Va-FD 383 (636)
T KOG2394|consen 363 ERRVVARGQGHKSWVSVVA-FD 383 (636)
T ss_pred cceEEEeccccccceeeEe-ec
Confidence 9999999999999999999 76
No 219
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.57 E-value=2.4e-12 Score=107.45 Aligned_cols=181 Identities=19% Similarity=0.319 Sum_probs=133.9
Q ss_pred eeEEEecCC-eEEEEecC------CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCC-cee-
Q 014590 115 VDQCRMKRG-LILTGVGD------KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL-RSV- 185 (422)
Q Consensus 115 v~~v~~~~~-~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~-~~~- 185 (422)
+.-+-|..+ +.+.||.+ ..|.|||=...+++.++.....+..+.+. ...++.-..+.|.+|...+. +.+
T Consensus 51 ~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~el~f~~~I~~V~l~--r~riVvvl~~~I~VytF~~n~k~l~ 128 (346)
T KOG2111|consen 51 IVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCIIELSFNSEIKAVKLR--RDRIVVVLENKIYVYTFPDNPKLLH 128 (346)
T ss_pred hhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEEEEEeccceeeEEEc--CCeEEEEecCeEEEEEcCCChhhee
Confidence 334445555 33344433 57999997777888888776655555554 56788888999999998743 332
Q ss_pred -eecCCCceeeeEEEeeeCCe--E-EEecCCCeEEEEeCCCcce--eeeeecCCccEEEEEec-CCCEEEEEcCCCc-EE
Q 014590 186 -FPSREGTFMKGLCMRYFDPE--A-VVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLS-EDQLIISGSSLGS-IA 257 (422)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~--l-~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~-i~ 257 (422)
+....++. ...++.+.... | +-|-.-|.|+|-|+...+. ...+.+|...|.|++.+ ++..+|++|..|+ |+
T Consensus 129 ~~et~~NPk-GlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIR 207 (346)
T KOG2111|consen 129 VIETRSNPK-GLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIR 207 (346)
T ss_pred eeecccCCC-ceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEE
Confidence 22322222 13444443333 2 3455679999999976655 47789999999999999 5689999999997 79
Q ss_pred EEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 258 ISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 258 iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
+||..+|..+ ..|.+++|||+..+|++++..|++.||.++.
T Consensus 208 IFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 208 IFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 9999999887 8899999999999999999999999998874
No 220
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=2.4e-13 Score=116.27 Aligned_cols=294 Identities=14% Similarity=0.098 Sum_probs=196.0
Q ss_pred HHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhc----CCCCC--------------CCCChHHHHHHHHHhhhh
Q 014590 34 MIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH----GFSNT--------------SGSSMRLHLEELAMKHHR 95 (422)
Q Consensus 34 ~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~----~~~~~--------------~~~~~~~~~~~~~~~~~~ 95 (422)
+|-+||.-+.|.....|-+.|+.-.. -|.+|++.. ...+. .+.-.+.|-..-...
T Consensus 18 ~i~~FL~QR~i~~~~~~~k~F~~~~~----~R~~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~--- 90 (609)
T KOG4227|consen 18 KIESFLCQREIGSVKSVVKTFRPDFQ----HRPFCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMV--- 90 (609)
T ss_pred eeeeeeeecccCCChhhhhhhchhhh----hcchhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHh---
Confidence 46678888888777777777765333 344554432 22111 111222332211111
Q ss_pred hhccccceeeEEee-ccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC---ceeeEEEecCCCeEE-E
Q 014590 96 FALEEGRIDIDQWK-AHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV-G 168 (422)
Q Consensus 96 ~~~~~~~~~~~~l~-~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-~ 168 (422)
.+..++|.... .|...|.|++|. .+ ++++|+.+++|.+-|+++.+.+..+.... .+..+..+|..+.++ .
T Consensus 91 ---~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~ 167 (609)
T KOG4227|consen 91 ---RKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVV 167 (609)
T ss_pred ---hcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEE
Confidence 11223444333 355899999995 34 99999999999999999999998887754 556688999877777 8
Q ss_pred ecCCeEEEEECCCCc----eeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc-eeee------eecCCccE
Q 014590 169 LIGTRICIWRRNGLR----SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-CSQI------IRMHCAPV 236 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~-~~~~------~~~~~~~v 236 (422)
+.++.|.+||..... .++....+......-+.+..|. |++.+..+-+-+||.+..+ .+.. ++.....-
T Consensus 168 t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~ 247 (609)
T KOG4227|consen 168 TRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEW 247 (609)
T ss_pred ecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhh
Confidence 889999999987654 2333333433344455555554 7888888999999987543 1211 11111223
Q ss_pred EEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC---
Q 014590 237 TSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT--- 298 (422)
Q Consensus 237 ~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--- 298 (422)
.++.|+|+ +.+++--....-.+||+-+..+. ..+.+++|-.|. .+++|+.+=.|++|.+..
T Consensus 248 M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~d 326 (609)
T KOG4227|consen 248 MGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRAND 326 (609)
T ss_pred hheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCcc
Confidence 56778875 66666655555666776654332 567788886554 599999998999998752
Q ss_pred --C------------------eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 299 --M------------------KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 299 --~------------------~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
| +.+..+++|...++.+. |+|...+|++.+-.+.+++|.-
T Consensus 327 s~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVR-F~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 327 SYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVR-FSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred ccCccccCcchhhCchhheecceeEEEeccccccccee-ecCCcceEeccchhhheecccc
Confidence 1 13456889999999999 9999999999999999999964
No 221
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.54 E-value=1e-12 Score=110.60 Aligned_cols=240 Identities=14% Similarity=0.190 Sum_probs=157.4
Q ss_pred ccceeeEEeeccccceeEEEe-cC-CeEEEEecCCeEEEEE-cCCCeEEEeeeC--CCceeeEEEecCCCeEE-EecCCe
Q 014590 100 EGRIDIDQWKAHSVGVDQCRM-KR-GLILTGVGDKVMRLWS-LEGYKCVEEYSL--PNAASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 100 ~~~~~~~~l~~H~~~v~~v~~-~~-~~l~s~~~dg~v~iwd-~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
.....++.++||.+.|+.... +. .-+++.+.|.++|||- .+.++.-..+.. +....++++.++...|+ +-.+|+
T Consensus 12 ~kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngt 91 (404)
T KOG1409|consen 12 KKPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGT 91 (404)
T ss_pred cchhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecce
Confidence 334567789999999999766 53 3899999999999995 344554444433 55677788998888888 778899
Q ss_pred EEEEECCCCc---eeeecCCCceeeeEEEee--eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEE
Q 014590 174 ICIWRRNGLR---SVFPSREGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLII 248 (422)
Q Consensus 174 i~~w~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~ 248 (422)
+.-+.+...- ...+....+...+....+ ....+++.+.|..+.---.+.+..+..+.-- ..-.++.+.- .+..
T Consensus 92 vtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~-~~~t~~~~d~-~~~f 169 (404)
T KOG1409|consen 92 VTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFE-TPASALQFDA-LYAF 169 (404)
T ss_pred EEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEee-ccCCCCceee-EEEE
Confidence 9888765422 112222233333333333 3344888888877654444555443322110 0001111110 1444
Q ss_pred EEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe-eeeeeccCCCceeeeeeE
Q 014590 249 SGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK-SLWETRISPNVVYSLQHL 318 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~ 318 (422)
.|...|.|.+-.+...... ..+.+++|.|....+.+|..|..+.+||+.-.+ ...++.+|...|..+. .
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~-~ 248 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALS-Y 248 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhh-h
Confidence 4555555544443222211 889999999999999999999999999997433 3457888999999887 6
Q ss_pred ecCCCEEEEEecCCeEEEEECCCC
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
-+.-+.+.+++.||.|.+||....
T Consensus 249 ~~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 249 AQHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred hhhheeeeeccCCCeEEEEeccce
Confidence 667788999999999999998743
No 222
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=1.2e-11 Score=115.63 Aligned_cols=216 Identities=13% Similarity=0.059 Sum_probs=143.5
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee---cCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL---IGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
..|.+||.+.........+.......+|+|||+.|+ .+ .+..+.+|++.+++.. +....++ .....+++++..|
T Consensus 179 ~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~-~~~~~~SPDG~~L 257 (429)
T PRK03629 179 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH-NGAPAFSPDGSKL 257 (429)
T ss_pred eeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCC-cCCeEECCCCCEE
Confidence 378899987654444344445566799999999988 43 2457999999887633 2222232 2346788888886
Q ss_pred EEe-cCCC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC-CCc--EEEEeCCCCccc------cceEeE
Q 014590 207 VVG-CEDG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-LGS--IAISGLSSDQRL------TGIKTL 273 (422)
Q Consensus 207 ~~~-~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-dg~--i~iwd~~~~~~~------~~v~~~ 273 (422)
+.. +.+| .|.+||+.+++...... +...+....|+|+ +.++..+. ++. |..+|+.++... ......
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~~lt~-~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~ 336 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDA 336 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEccC-CCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCE
Confidence 644 4444 58899998877654433 4456778899987 66666554 344 555577665433 345678
Q ss_pred EEecCCCEEEEEeCC---CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCe---EEEEECCCCceEEE
Q 014590 274 CYNPCSRLVFAGTTA---GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGV---LRVLDQNTGEVLSR 347 (422)
Q Consensus 274 ~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~---v~vwd~~~~~~~~~ 347 (422)
.|+|||++++..+.+ ..|.+||+.+++.. .+... ....... |+|||+.|+.++.++. +.++++. |.....
T Consensus 337 ~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~-~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~ 412 (429)
T PRK03629 337 DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPS-IAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKAR 412 (429)
T ss_pred EECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCce-ECCCCCEEEEEEcCCCceEEEEEECC-CCCeEE
Confidence 999999999876543 35888999877543 33321 2234566 8999999999887764 6777774 666666
Q ss_pred eeecCC
Q 014590 348 CVMDIG 353 (422)
Q Consensus 348 ~~~~~~ 353 (422)
+..+..
T Consensus 413 l~~~~~ 418 (429)
T PRK03629 413 LPATDG 418 (429)
T ss_pred CccCCC
Confidence 665444
No 223
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.53 E-value=1.1e-11 Score=103.97 Aligned_cols=226 Identities=15% Similarity=0.119 Sum_probs=161.7
Q ss_pred cceeEEEec-CC--eEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE--EecCCeEEEEECCCCceee
Q 014590 113 VGVDQCRMK-RG--LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVF 186 (422)
Q Consensus 113 ~~v~~v~~~-~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~ 186 (422)
+.|.-+.|. |. .|.....|+.|.+|++...+....+... .+....+|||||+.++ +..+-.|.+|.+.+.....
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~ 128 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL 128 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence 345566664 33 5666778999999999988877777654 5566799999998887 6678899999999988777
Q ss_pred ecCCCceeeeEEEeeeCCeEEEecC------------------------------------CCeEEEEeCCCcceeeeee
Q 014590 187 PSREGTFMKGLCMRYFDPEAVVGCE------------------------------------DGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~------------------------------------d~~i~iwd~~~~~~~~~~~ 230 (422)
..+..+.....++.+++.+.+..+. +..+.+||..-.-.+..+.
T Consensus 129 ~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe 208 (447)
T KOG4497|consen 129 LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE 208 (447)
T ss_pred ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee
Confidence 7776666677888777776433321 2334555532111122222
Q ss_pred cCCccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc------------------------------------------
Q 014590 231 MHCAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL------------------------------------------ 267 (422)
Q Consensus 231 ~~~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~------------------------------------------ 267 (422)
-.-.+..+.|+| +++++.|+.|+.+++.+--+-+..
T Consensus 209 -~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~ 287 (447)
T KOG4497|consen 209 -RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAH 287 (447)
T ss_pred -eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccC
Confidence 124678899999 599999999999988664332211
Q ss_pred -------------------------------cceEeEEEecCCCEEEEEeCC--CeEEEEECCCCeeeeeeccCCCceee
Q 014590 268 -------------------------------TGIKTLCYNPCSRLVFAGTTA--GYASCWDLRTMKSLWETRISPNVVYS 314 (422)
Q Consensus 268 -------------------------------~~v~~~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~ 314 (422)
..+--++|++|..++++-... +.+-+||++..+....+ ....+|..
T Consensus 288 ~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~pira 366 (447)
T KOG4497|consen 288 IWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPIRA 366 (447)
T ss_pred ccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccceeE
Confidence 446678999999998887643 56999999976655443 34567888
Q ss_pred eeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 315 LQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 315 l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.. |+|....|+.+.....+++|...-
T Consensus 367 f~-WdP~~prL~vctg~srLY~W~psg 392 (447)
T KOG4497|consen 367 FE-WDPGRPRLVVCTGKSRLYFWAPSG 392 (447)
T ss_pred EE-eCCCCceEEEEcCCceEEEEcCCC
Confidence 88 999988888888888899998763
No 224
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.52 E-value=8.1e-13 Score=118.36 Aligned_cols=232 Identities=16% Similarity=0.193 Sum_probs=159.8
Q ss_pred eeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeC---CeEEEecCCCeEEEEeCC
Q 014590 147 EYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFD---PEAVVGCEDGTARVFDMY 221 (422)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~d~~i~iwd~~ 221 (422)
.|..+.....+.++|||.+++ |.-.-.|++||+.+....+..+.... ++.+.... ..++.-..|.+|.+...
T Consensus 47 dfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae--~V~feiLsDD~SK~v~L~~DR~IefHak- 123 (703)
T KOG2321|consen 47 DFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAE--VVDFEILSDDYSKSVFLQNDRTIEFHAK- 123 (703)
T ss_pred hcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeeccccc--ceeEEEeccchhhheEeecCceeeehhh-
Confidence 344555566699999999988 55578999999998876666555433 22222222 12444455666655432
Q ss_pred CcceeeeeecCCccEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEE
Q 014590 222 SRKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASC 293 (422)
Q Consensus 222 ~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~i 293 (422)
-|... .++. ...-..++++ |..-++.++....|+-+++..|..+ +.++++..++...+|++|+.+|.|..
T Consensus 124 ~G~hy-~~RI-P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEf 201 (703)
T KOG2321|consen 124 YGRHY-RTRI-PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEF 201 (703)
T ss_pred cCeee-eeec-CcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEE
Confidence 22111 1111 1233567777 5544455555678999999999887 88999999999999999999999999
Q ss_pred EECCCCeeeeeecc------CCC-----ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCC
Q 014590 294 WDLRTMKSLWETRI------SPN-----VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKV 362 (422)
Q Consensus 294 wd~~~~~~~~~~~~------~~~-----~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~ 362 (422)
||.++...+.++.. |.+ .|+++. |+.+|-.+++|+.+|.|.|||+++.+++..- .|..
T Consensus 202 wDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~-F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~--------- 270 (703)
T KOG2321|consen 202 WDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALK-FRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGY--------- 270 (703)
T ss_pred ecchhhhhheeeecccccCCCccccccCcceEEE-ecCCceeEEeeccCCcEEEEEcccCCceeec-ccCC---------
Confidence 99998665554432 333 499999 9888999999999999999999988776543 2222
Q ss_pred CCeEEeeeccccCCCcccccCCCCCCCCeEEEEe---c-CEEEEEEeCCCeEEEEEccCCCC
Q 014590 363 SGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV---G-MKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 363 d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---~-~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.-+|..+.| + .+.++|. +...++|||-.+++.
T Consensus 271 -------------------------e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~ 306 (703)
T KOG2321|consen 271 -------------------------ELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKP 306 (703)
T ss_pred -------------------------ccceeeecccccCCCceEEec-chHHhhhcccccCCc
Confidence 247788888 2 3455543 456789999887764
No 225
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.50 E-value=4.4e-11 Score=101.62 Aligned_cols=225 Identities=11% Similarity=0.133 Sum_probs=152.8
Q ss_pred ceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeC--CCceeeEEEecCCC-eEEEecCCeEEEEECCCCc-----
Q 014590 114 GVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSL--PNAASLVDFDFDES-KIVGLIGTRICIWRRNGLR----- 183 (422)
Q Consensus 114 ~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~~~~~i~~w~~~~~~----- 183 (422)
.+..++|+.- .++++..|-.|++||-.. ++...++. ...+.+++|-|.+. .|+.+..+.|++|..+...
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~ 178 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRN 178 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccc
Confidence 3555667544 788899999999999776 55555554 34567899999654 4557778889999764311
Q ss_pred ---------eeeecCCCceeeeEEEeeeCCeEEEecC-CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 184 ---------SVFPSREGTFMKGLCMRYFDPEAVVGCE-DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 184 ---------~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
.+++......+..+.+..++..+++++. |..|.|||..++..+.....-.+.+.-+.|+|+ .++++++.
T Consensus 179 ~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~ 258 (445)
T KOG2139|consen 179 IRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATC 258 (445)
T ss_pred cccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecc
Confidence 1233333345566777777777887775 578999999999876655445677889999998 89999999
Q ss_pred CCcEEEEeCCCCc-cc------cceEeEEEecCCCEEEEEeCCCeEEEEECCC-Ce--------------eeeee-----
Q 014590 253 LGSIAISGLSSDQ-RL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT-MK--------------SLWET----- 305 (422)
Q Consensus 253 dg~i~iwd~~~~~-~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~--------------~~~~~----- 305 (422)
|+..++|+..... .. +.|...+|+|+|++|+..... .-.+|.+.- ++ ++..+
T Consensus 259 davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sg-sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti 337 (445)
T KOG2139|consen 259 DAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSG-SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTI 337 (445)
T ss_pred cceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcC-CceEEEEeecCCCccccCcccceeeeeeccchhhhh
Confidence 9999999654322 11 889999999999987765532 233443321 00 11111
Q ss_pred -cc---CCCceeeeeeEecCCCEEEEEecCC--------eEEEEECCC
Q 014590 306 -RI---SPNVVYSLQHLQNDTSTLVVGGIDG--------VLRVLDQNT 341 (422)
Q Consensus 306 -~~---~~~~v~~l~~~s~~~~~l~s~~~dg--------~v~vwd~~~ 341 (422)
.+ -.+.+.+++ |+|.|.+||+.-..+ .|.+||.+.
T Consensus 338 ~ag~~l~cgeaq~la-wDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 338 CAGQRLCCGEAQCLA-WDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred hcCcccccCccceee-ECCCCCEEEEEEcCCchhhhhhhhhhhhcccc
Confidence 11 135678888 999999998865443 355666553
No 226
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.4e-11 Score=115.26 Aligned_cols=212 Identities=11% Similarity=-0.019 Sum_probs=141.0
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEe---cCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-E-ecCC--eEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGV---GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGT--RICI 176 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~--~i~~ 176 (422)
+.+..+...+.+.+| +|| .|+..+ .+..+.+|++.+++..............+|+|||+.|+ . ..++ .|.+
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~ 271 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 271 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEE
Confidence 445556667888899 677 666543 24579999999886544333333344589999999988 3 3344 5889
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCC-C--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCED-G--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
||++++................+++++..|+..+.+ + .|.++|+.+++.. .+..+........|+|+ +.++..+.
T Consensus 272 ~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~~~ 350 (429)
T PRK03629 272 MDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSS 350 (429)
T ss_pred EECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEEc
Confidence 999887643222222233456788888887666543 4 4555577666543 33334445567889987 66666543
Q ss_pred C---CcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCe---EEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 253 L---GSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGY---ASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 253 d---g~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~---i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
+ ..|.+||+.+++.. .......|+|||+.++.++.++. +.++++. +.....+..|.+.+...+ |+|
T Consensus 351 ~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~-Wsp 427 (429)
T PRK03629 351 NGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPA-WSP 427 (429)
T ss_pred cCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcc-cCC
Confidence 3 35888999877654 23456789999999999887764 6777774 666667777888888887 766
No 227
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=2e-11 Score=114.62 Aligned_cols=213 Identities=16% Similarity=0.092 Sum_probs=140.1
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec---CCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI---GTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~---~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
..|.+||...........+.......+|+|||+.|+ .+. ...|.+||+.++... +....+ ......+++++..+
T Consensus 184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g-~~~~~~~SpDG~~l 262 (433)
T PRK04922 184 YALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG-INGAPSFSPDGRRL 262 (433)
T ss_pred EEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC-CccCceECCCCCEE
Confidence 368899986544433333444556689999999988 442 347999999887643 222333 22356778888875
Q ss_pred E-EecCCC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCCc--EEEEeCCCCccc------cceEeE
Q 014590 207 V-VGCEDG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGS--IAISGLSSDQRL------TGIKTL 273 (422)
Q Consensus 207 ~-~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg~--i~iwd~~~~~~~------~~v~~~ 273 (422)
+ +.+.+| .|.+||+.+++.. .+..+.......+|+|+ +.++.++ .+|. |.++|+.+++.. ......
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~ 341 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARA 341 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCE
Confidence 4 445554 6999999887754 34445555567899987 6666555 3444 777777665543 234568
Q ss_pred EEecCCCEEEEEeCCC---eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC---CeEEEEECCCCceEEE
Q 014590 274 CYNPCSRLVFAGTTAG---YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQNTGEVLSR 347 (422)
Q Consensus 274 ~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~ 347 (422)
+|+|||++++..+.++ .|.+||+.+++.. .+. +........ |+|||++|+..+.+ +.+.++++. +.....
T Consensus 342 ~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~-~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~ 417 (433)
T PRK04922 342 SVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPS-FAPNGSMVLYATREGGRGVLAAVSTD-GRVRQR 417 (433)
T ss_pred EECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCce-ECCCCCEEEEEEecCCceEEEEEECC-CCceEE
Confidence 9999999998765433 6999999877654 333 222345566 99999988776653 467788875 444555
Q ss_pred eee
Q 014590 348 CVM 350 (422)
Q Consensus 348 ~~~ 350 (422)
+..
T Consensus 418 l~~ 420 (433)
T PRK04922 418 LVS 420 (433)
T ss_pred ccc
Confidence 543
No 228
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.47 E-value=1e-11 Score=102.40 Aligned_cols=129 Identities=14% Similarity=0.234 Sum_probs=95.9
Q ss_pred EEEEeCCCcceeeeeec-CCccEEEEEecCC-CEEE--EEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEE
Q 014590 215 ARVFDMYSRKCSQIIRM-HCAPVTSLSLSED-QLII--SGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAG 285 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~-~~l~--s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g 285 (422)
+...+... .....+.. ..++|.+++|+|+ +.|+ .|..++.|.+||++ ++.+ ..+..+.|+|+|+++++|
T Consensus 41 l~~~~~~~-~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~~~n~i~wsP~G~~l~~~ 118 (194)
T PF08662_consen 41 LFYLNEKN-IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQPRNTISWSPDGRFLVLA 118 (194)
T ss_pred EEEEecCC-CccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecCCCceEEEECCCCCEEEEE
Confidence 33444332 33444432 3457999999997 5543 34567899999997 4443 778899999999999998
Q ss_pred eC---CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec------CCeEEEEECCCCceEEEee
Q 014590 286 TT---AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI------DGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 286 ~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~------dg~v~vwd~~~~~~~~~~~ 349 (422)
+. .|.|.+||.++.+.+.+.. | ..++.++ |+|+|+++++++. |+.++||+.. |+.+....
T Consensus 119 g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~-WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~~ 187 (194)
T PF08662_consen 119 GFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVE-WSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKKP 187 (194)
T ss_pred EccCCCcEEEEEECCCCEEeeccc-c-CcEEEEE-EcCCCCEEEEEEeccceeccccEEEEEec-CeEeEecc
Confidence 74 4679999999988887764 3 3468888 9999999999874 7889999985 77776653
No 229
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.46 E-value=5e-11 Score=111.63 Aligned_cols=213 Identities=14% Similarity=0.073 Sum_probs=133.9
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec---CCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI---GTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~---~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
..|.++|...................+|+|||+.|+ .+. ...|.+||+.+++.. +....+. .....+++++..+
T Consensus 176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~-~~~~~~SPDG~~l 254 (427)
T PRK02889 176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGS-NSAPAWSPDGRTL 254 (427)
T ss_pred cEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCC-ccceEECCCCCEE
Confidence 467777775433333333344556689999999988 443 246999999887643 2223332 2356788888876
Q ss_pred E-EecCCCeEEEE--eCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCCcEEEEe--CCCCccc------cceEeE
Q 014590 207 V-VGCEDGTARVF--DMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGSIAISG--LSSDQRL------TGIKTL 273 (422)
Q Consensus 207 ~-~~~~d~~i~iw--d~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg~i~iwd--~~~~~~~------~~v~~~ 273 (422)
+ +.+.++...+| |..++. ...+..+.+......|+|+ +.++..+ .+|...+|. +.++... ......
T Consensus 255 a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~ 333 (427)
T PRK02889 255 AVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSP 333 (427)
T ss_pred EEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCce
Confidence 5 56777776665 454444 4445445555667889987 6666544 345656664 4444322 234467
Q ss_pred EEecCCCEEEEEeCCC---eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCC---eEEEEECCCCceEEE
Q 014590 274 CYNPCSRLVFAGTTAG---YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG---VLRVLDQNTGEVLSR 347 (422)
Q Consensus 274 ~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~ 347 (422)
+|+|||++++..+.++ .|.+||+.+++.. .+..+ ....... |+|||+.|+..+.++ .+.+.++ +|.....
T Consensus 334 ~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~-~~~~~p~-~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~ 409 (427)
T PRK02889 334 RISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDT-TRDESPS-FAPNGRYILYATQQGGRSVLAAVSS-DGRIKQR 409 (427)
T ss_pred EECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCC-CCccCce-ECCCCCEEEEEEecCCCEEEEEEEC-CCCceEE
Confidence 8999999998777554 6999999887654 33222 2345677 999999888877544 3555565 3555555
Q ss_pred eee
Q 014590 348 CVM 350 (422)
Q Consensus 348 ~~~ 350 (422)
+..
T Consensus 410 l~~ 412 (427)
T PRK02889 410 LSV 412 (427)
T ss_pred eec
Confidence 543
No 230
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.44 E-value=2.7e-13 Score=126.36 Aligned_cols=233 Identities=15% Similarity=0.227 Sum_probs=171.1
Q ss_pred eeEEeeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEEECC
Q 014590 104 DIDQWKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIWRRN 180 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w~~~ 180 (422)
+...+.||.+.|+.++.+ ++ .++++|.|..|++|.+.++.++..+.+|.+ +..++|+|-. ..+.||++++||..
T Consensus 224 ~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 224 CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc---cCCCCCceEecccc
Confidence 456678999999999996 44 999999999999999999999999998865 4569999865 56789999999987
Q ss_pred -CCcee----eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCC
Q 014590 181 -GLRSV----FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSL 253 (422)
Q Consensus 181 -~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~d 253 (422)
..... .....+......-+...+..+++|+.|++-..|.+..-.. +...+.-+..+.+ .+.+++-.+
T Consensus 301 ~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~------~~~~lif~t~ssd~~~~~~~ar~~ 374 (1113)
T KOG0644|consen 301 LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAW------RSNLLIFVTRSSDLSSIVVTARND 374 (1113)
T ss_pred ccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhh------hccceEEEeccccccccceeeeee
Confidence 21111 1122223333334444455589999999988887653221 1111111222212 567777788
Q ss_pred CcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 254 GSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 254 g~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
-.+++|++.+|+.. ..+..+.++|-. +...+++.||...|||+..|.+++.+....+.+..-+ ||++|..+
T Consensus 375 ~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~k-FSqdgts~ 453 (1113)
T KOG0644|consen 375 HRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGK-FSQDGTSI 453 (1113)
T ss_pred eEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccc-cCCCCceE
Confidence 89999999999776 788899999965 4556889999999999999988776654445566667 99999999
Q ss_pred EEEecCCeEEEEECCCCceEE
Q 014590 326 VVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~ 346 (422)
+....-|.++|.....++...
T Consensus 454 ~lsd~hgql~i~g~gqs~s~k 474 (1113)
T KOG0644|consen 454 ALSDDHGQLYILGTGQSKSQK 474 (1113)
T ss_pred ecCCCCCceEEeccCCCcccc
Confidence 998888999999876555433
No 231
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=3.9e-11 Score=112.74 Aligned_cols=214 Identities=10% Similarity=-0.036 Sum_probs=139.5
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEec---CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCC--eE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVG---DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGT--RI 174 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~--~i 174 (422)
..+.+..|...+.+.+| +|| .|+..+. +..|.+||+.+++..............+|+|||+.++ .+.++ .|
T Consensus 195 ~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~I 274 (433)
T PRK04922 195 NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEI 274 (433)
T ss_pred CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceE
Confidence 34556677778888888 577 7777664 3469999998887644333333334589999999886 34444 69
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-CCe--EEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEE
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-DGT--ARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~--i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
.+||+.++...............++++++..++.++. +|. |.++|+.+++.... ..+.......+|+|+ +.++..
T Consensus 275 y~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l-t~~g~~~~~~~~SpDG~~Ia~~ 353 (433)
T PRK04922 275 YVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL-TFQGNYNARASVSPDGKKIAMV 353 (433)
T ss_pred EEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-ecCCCCccCEEECCCCCEEEEE
Confidence 9999988764322222222334677888887766553 444 66777766654332 223334456899987 666665
Q ss_pred cCCC---cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCC---CeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 251 SSLG---SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTA---GYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 251 ~~dg---~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
+.++ .|.+||+.+++.. .......|+|||++++..+.+ +.|.++++. +.....+..+.+.+...+ |+
T Consensus 354 ~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~-ws 431 (433)
T PRK04922 354 HGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPA-WS 431 (433)
T ss_pred ECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCc-cC
Confidence 4332 6999999877654 344567999999988877653 458888885 444555655556666666 65
Q ss_pred c
Q 014590 320 N 320 (422)
Q Consensus 320 ~ 320 (422)
|
T Consensus 432 p 432 (433)
T PRK04922 432 P 432 (433)
T ss_pred C
Confidence 5
No 232
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.44 E-value=2.1e-12 Score=113.52 Aligned_cols=250 Identities=16% Similarity=0.223 Sum_probs=174.1
Q ss_pred EeeeCCCce-eeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEE--eeeCCe--EEEecCCCeEEEEe
Q 014590 146 EEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCM--RYFDPE--AVVGCEDGTARVFD 219 (422)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--l~~~~~d~~i~iwd 219 (422)
..+..|.+. ..+.|...|..++ ++.|..|.+||.......+....+|...+... .++... +++++.||.|++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 345555444 4599999999999 88899999999999888877777776554443 333332 99999999999876
Q ss_pred CC-Ccce--eeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------------cceEeEEEecCCC-
Q 014590 220 MY-SRKC--SQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------------TGIKTLCYNPCSR- 280 (422)
Q Consensus 220 ~~-~~~~--~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~- 280 (422)
+. ++.+ .+.+..|.++|.-++.-|+ ..|.+++.|+.+.-+|++.+... .....++.+|...
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~ 295 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN 295 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence 53 3332 3445679999999999987 78999999999999999877654 3567788888664
Q ss_pred EEEEEeCCCeEEEEECCCCee------eeeec------cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEe
Q 014590 281 LVFAGTTAGYASCWDLRTMKS------LWETR------ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 281 ~l~~g~~dg~i~iwd~~~~~~------~~~~~------~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
.+++|+.|-.+++||.+.-.. +.++- ...-.|++++ ++.++.-|.++-.|-.|+++.-..+.-....
T Consensus 296 ~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~-Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~ 374 (559)
T KOG1334|consen 296 EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLV-YSHDGSELLASYNDEDIYLFNKSMGDGSEPD 374 (559)
T ss_pred ccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEE-ecCCccceeeeecccceEEeccccccCCCCC
Confidence 899999999999999874211 12222 1234689999 8877776666777878999953322110000
Q ss_pred eecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCC--CCeEEEEe---cCEEEEEEeCCCeEEEEEccCCC
Q 014590 349 VMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIR--PPITCLAV---GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 349 ~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~i~~---~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
... +.........++|. ..|.++-| ...++++||+=|.|.||+-.+++
T Consensus 375 ~~s-----------------------~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e 427 (559)
T KOG1334|consen 375 PSS-----------------------PREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE 427 (559)
T ss_pred CCc-----------------------chhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhH
Confidence 000 00001112234454 35778888 36899999999999999976653
No 233
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B.
Probab=99.43 E-value=1e-13 Score=85.44 Aligned_cols=46 Identities=41% Similarity=0.577 Sum_probs=40.8
Q ss_pred ccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHH
Q 014590 24 IESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYC 69 (422)
Q Consensus 24 ~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 69 (422)
+..||.|++.+||+||+++||.++++|||+|+.++.++.+|+.++.
T Consensus 1 i~~LP~Eil~~If~~L~~~dl~~~~~vcr~w~~~~~~~~lW~~~~~ 46 (47)
T PF12937_consen 1 ISSLPDEILLEIFSYLDPRDLLRLSLVCRRWRRIANDNSLWRRLCL 46 (47)
T ss_dssp CCCS-HHHHHHHHTTS-HHHHHHHTTSSHHHHHHHTCCCHHHHHC-
T ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCChhhhhhhcc
Confidence 4689999999999999999999999999999999999999998864
No 234
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=2.5e-10 Score=107.49 Aligned_cols=208 Identities=12% Similarity=-0.009 Sum_probs=137.4
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee---cCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL---IGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
..|.++|...........+...+...+|+|||+.|+ .+ .+..|.+||+.++... +....+ ......+++++..+
T Consensus 182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~l 260 (435)
T PRK05137 182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPG-MTFAPRFSPDGRKV 260 (435)
T ss_pred eEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCC-cccCcEECCCCCEE
Confidence 478889986544433333444566799999999988 43 2468999999887643 333333 23356778888875
Q ss_pred E-EecCCCe--EEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC-CC--cEEEEeCCCCccc------cceEeE
Q 014590 207 V-VGCEDGT--ARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-LG--SIAISGLSSDQRL------TGIKTL 273 (422)
Q Consensus 207 ~-~~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-dg--~i~iwd~~~~~~~------~~v~~~ 273 (422)
+ +.+.++. |.+||+.+++.. .+..+........|+|+ +.++..+. +| .|.++|+..+... ..+...
T Consensus 261 a~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~ 339 (435)
T PRK05137 261 VMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTP 339 (435)
T ss_pred EEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCe
Confidence 4 5555554 777898877654 44545566677899987 66666553 33 6888888765443 345678
Q ss_pred EEecCCCEEEEEeCC---CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC------CeEEEEECCCCce
Q 014590 274 CYNPCSRLVFAGTTA---GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID------GVLRVLDQNTGEV 344 (422)
Q Consensus 274 ~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d------g~v~vwd~~~~~~ 344 (422)
.|+|+|+.|+....+ ..|.+||+.++.. ..+.. ...+.... |+|||+.|+..+.+ ..++++|+..+..
T Consensus 340 ~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~-~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 340 VWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPT-WAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred EECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCe-ECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 899999999877643 3688899865433 33322 23466777 99999988765543 3577888764433
No 235
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.40 E-value=2e-11 Score=110.17 Aligned_cols=195 Identities=11% Similarity=0.112 Sum_probs=143.4
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCc---eeeecCCCceeeeEEEe
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR---SVFPSREGTFMKGLCMR 200 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~---~~~~~~~~~~~~~~~~~ 200 (422)
|+|....||.+++||..+++....|..... .+..++-..|.+.-.. ....... .....
T Consensus 7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~--------------~s~t~~~~~w~L~~~~s~~k~~~~~~-----~~~~s 67 (541)
T KOG4547|consen 7 YFALSTGDGRLRIWDTAKNQLQQEFAPIAS--------------LSGTCTYTKWGLSADYSPMKWLSLEK-----AKKAS 67 (541)
T ss_pred eEeecCCCCeEEEEEccCceeeeeeccchh--------------ccCcceeEEEEEEeccchHHHHhHHH-----Hhhcc
Confidence 899999999999999999988887754211 1112222233321110 0000000 00001
Q ss_pred eeCCeEEEecCCCeEEEEeCCCcceeeeee--cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cce
Q 014590 201 YFDPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGI 270 (422)
Q Consensus 201 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v 270 (422)
.+...++-|...|.|.+|+...|+....+. .|.+.|.++.++.+ ..+.+++.|+.+..|+...+... ..+
T Consensus 68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~ 147 (541)
T KOG4547|consen 68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLV 147 (541)
T ss_pred CCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCcc
Confidence 111127888999999999999999877774 68999999998876 89999999999999999888766 778
Q ss_pred EeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC-----CCEEEEE-ecCCeEEEEECC
Q 014590 271 KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND-----TSTLVVG-GIDGVLRVLDQN 340 (422)
Q Consensus 271 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~-----~~~l~s~-~~dg~v~vwd~~ 340 (422)
.+++.+|||..+++++ +.|++||+.+++.+.++.+|.++|.++. |..+ |.+++++ ..+..+.+|-+.
T Consensus 148 ~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~-f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 148 SSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLS-FTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred ceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEE-EEEeccccccceeeeccccccceeEEEEE
Confidence 8999999999999887 5799999999999999999999999999 6555 5665554 445567788654
No 236
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.40 E-value=1.6e-11 Score=117.49 Aligned_cols=262 Identities=16% Similarity=0.143 Sum_probs=170.5
Q ss_pred cccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecC------CCeEE-EecCCeEEEEECCCCc
Q 014590 111 HSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFD------ESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 111 H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
|-+++.+..+-.+||+.|+. -.|.++|+..+..+..+..-+....- .+. +..++ +..-+.+..=+....
T Consensus 6 ~~~~l~~~~~~~~~llag~g-p~i~~yd~~s~~li~~~~~~~~~~~H--~~e~~~~l~~~~~v~~~~~~~v~~~~~~~~- 81 (967)
T KOG0974|consen 6 SLGPLNLPQLVSDYLLAGSG-PEILVYDLSSGCLIRHLIQSKILEVH--RGEGKVKLLSGKIVTCAKSDEVYVKEASNQ- 81 (967)
T ss_pred ccccccchhhccceeeecCC-CceEEeeCCchhHhhhhhhhcccccc--cccccceeccceEEEEEeecceeecchhhh-
Confidence 44555666663466665543 47999999987666544321111000 111 11222 222222222111110
Q ss_pred eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccE-EE---EEecCC-CEEEEEcCCCcEEE
Q 014590 184 SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV-TS---LSLSED-QLIISGSSLGSIAI 258 (422)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~---l~~~~~-~~l~s~~~dg~i~i 258 (422)
......+... ...+......++.++.++.+-+||...+.....+....... .+ +..+++ -++++|+.-+.|.+
T Consensus 82 -~~~~~s~wi~-g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iiv 159 (967)
T KOG0974|consen 82 -IIERFSDWIF-GAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIV 159 (967)
T ss_pred -hhhhcccccc-ccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEE
Confidence 0111111111 12222334458888889999999998776665554322211 11 222344 48999999999999
Q ss_pred EeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee-eeccCCCceeeeeeEecCCCEEEEEec
Q 014590 259 SGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW-ETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 259 wd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
|+....... +.|.++.++-||+++++.+.|..+++|++.+.+... ..-+|...|+.+. |.|+ .+++++.
T Consensus 160 W~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~-~~~n--~i~t~ge 236 (967)
T KOG0974|consen 160 WKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACC-FLPN--RIITVGE 236 (967)
T ss_pred EeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEE-eccc--eeEEecc
Confidence 997622211 889999999999999999999999999999987766 6678999999998 8777 8999999
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
|-+.++|+.. ++.+..+..|.. ..|..++. +...++|++.|+
T Consensus 237 dctcrvW~~~-~~~l~~y~~h~g-----------------------------------~~iw~~~~~~~~~~~vT~g~Ds 280 (967)
T KOG0974|consen 237 DCTCRVWGVN-GTQLEVYDEHSG-----------------------------------KGIWKIAVPIGVIIKVTGGNDS 280 (967)
T ss_pred ceEEEEEecc-cceehhhhhhhh-----------------------------------cceeEEEEcCCceEEEeeccCc
Confidence 9999999754 666667766554 56788777 467899999999
Q ss_pred eEEEEEccC
Q 014590 409 YIRLWKFNY 417 (422)
Q Consensus 409 ~i~iW~~~~ 417 (422)
.+++|+...
T Consensus 281 ~lk~~~l~~ 289 (967)
T KOG0974|consen 281 TLKLWDLNG 289 (967)
T ss_pred chhhhhhhc
Confidence 999999754
No 237
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.39 E-value=5.3e-10 Score=103.93 Aligned_cols=257 Identities=12% Similarity=0.065 Sum_probs=168.0
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCcee----
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFM---- 194 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~---- 194 (422)
...++.++.++.+|.+..+|.++|+.+.....+........-.++..++++.++.+..+|.++++.++........
T Consensus 117 ~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 117 TVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR 196 (394)
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence 3456677778889999999999999998877654332211222555555888999999999999877554332110
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-------cEEEEEecC---CCEEEEEcCCCcEEEEeCCCC
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA-------PVTSLSLSE---DQLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~l~~~~---~~~l~s~~~dg~i~iwd~~~~ 264 (422)
....-...+..++.++.++.+..+|..+|+.+...+.... ....+..+| ++.++.++.+|.+..+|..+|
T Consensus 197 ~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG 276 (394)
T PRK11138 197 GESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSG 276 (394)
T ss_pred CCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCC
Confidence 0001111234577788899999999999987766532110 011111223 467777888999999999999
Q ss_pred ccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 265 QRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 265 ~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
+.+ .....+. ..+..++.++.+|.+..+|..+++.+.+...-. ....+.. . .+.+|+.++.||.+++.|
T Consensus 277 ~~~W~~~~~~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~-v--~~g~l~v~~~~G~l~~ld 351 (394)
T PRK11138 277 QIVWKREYGSVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPV-L--YNGYLVVGDSEGYLHWIN 351 (394)
T ss_pred CEEEeecCCCccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCE-E--ECCEEEEEeCCCEEEEEE
Confidence 876 2112222 256678888899999999999998877543211 1122222 2 356788899999999999
Q ss_pred CCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEc
Q 014590 339 QNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~ 415 (422)
..+|+.+........ .......+.+..|+.++.||.|..++.
T Consensus 352 ~~tG~~~~~~~~~~~-----------------------------------~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 352 REDGRFVAQQKVDSS-----------------------------------GFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCCCCEEEEEEcCCC-----------------------------------cceeCCEEECCEEEEEeCCceEEEEeC
Confidence 999998887754211 011122233457888899999888764
No 238
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.39 E-value=5e-11 Score=100.10 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=133.6
Q ss_pred eEEEecCCCeEEEecCCeEEEEECCCCce--eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecC
Q 014590 156 LVDFDFDESKIVGLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMH 232 (422)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~ 232 (422)
..+|||+|+++++..+-.+-+-|.++.+. ++...+ .+ .-+.+..++-. +...+.++.|.+|++...+-...+...
T Consensus 13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cld-ki-~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg 90 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLD-KI-VYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG 90 (447)
T ss_pred ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHH-Hh-hheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC
Confidence 57899999999977777888888887652 222211 11 12344444444 667788999999999988877778777
Q ss_pred CccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeC-----------------
Q 014590 233 CAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTT----------------- 287 (422)
Q Consensus 233 ~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~----------------- 287 (422)
.+++.+++|+|+ ..+.+...+-.|.+|.+.+.+.. ..+..++|+|||++.+..+.
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~l 170 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWIL 170 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHH
Confidence 889999999997 46777788999999999887765 66788999999999887743
Q ss_pred -------------------CCeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE
Q 014590 288 -------------------AGYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 288 -------------------dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
+.-+.+||.--.-.+.. -|. -.+..++ ++|.+++|+.|+.|+.++|-+--+.+.+..
T Consensus 171 l~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~a--Ye~~lG~k~v~-wsP~~qflavGsyD~~lrvlnh~tWk~f~e 247 (447)
T KOG4497|consen 171 LKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYA--YERGLGLKFVE-WSPCNQFLAVGSYDQMLRVLNHFTWKPFGE 247 (447)
T ss_pred HHhcCCCcccccCceECCCCcEEEEecchhhheeee--eeeccceeEEE-eccccceEEeeccchhhhhhceeeeeehhh
Confidence 12233444221111111 122 4577888 999999999999999999877655554443
No 239
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.38 E-value=3.1e-10 Score=106.84 Aligned_cols=213 Identities=13% Similarity=-0.011 Sum_probs=137.8
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEec---CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCC--eE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVG---DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGT--RI 174 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~--~i 174 (422)
..+.+..|...+.+..| +|| .|+..+. +..|.+||+.+++..............+|+|||+.|+ .+.++ .|
T Consensus 193 ~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 272 (435)
T PRK05137 193 NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDI 272 (435)
T ss_pred CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceE
Confidence 44567788889999999 577 6666553 4689999999887643333333445689999999886 34444 47
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-C--CeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEE
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-D--GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
.+||+.++................+++++..++..+. + ..|.++|+.+++... +..+...+....|+|+ +.++..
T Consensus 273 y~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~~~~~~~~~~SpdG~~ia~~ 351 (435)
T PRK05137 273 YTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFGGGRYSTPVWSPRGDLIAFT 351 (435)
T ss_pred EEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecCCCcccCeEECCCCCEEEEE
Confidence 7789887764322222223345677888887766553 3 368888987665433 3334455667889987 666665
Q ss_pred cCC---CcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCC------CeEEEEECCCCeeeeeeccCCCceeeee
Q 014590 251 SSL---GSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTA------GYASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 251 ~~d---g~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
+.+ ..|.+||+..+... ..+....|+|||+.|+..+.+ ..++++|+..+.. ..+. ..+.+...+
T Consensus 352 ~~~~~~~~i~~~d~~~~~~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~~p~ 429 (435)
T PRK05137 352 KQGGGQFSIGVMKPDGSGERILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDASDPA 429 (435)
T ss_pred EcCCCceEEEEEECCCCceEeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCccCcc
Confidence 443 36888887554432 356788999999988776543 3588888875543 3443 233345555
Q ss_pred eEec
Q 014590 317 HLQN 320 (422)
Q Consensus 317 ~~s~ 320 (422)
|+|
T Consensus 430 -Wsp 432 (435)
T PRK05137 430 -WSP 432 (435)
T ss_pred -cCC
Confidence 554
No 240
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.38 E-value=1.5e-10 Score=108.40 Aligned_cols=212 Identities=11% Similarity=0.059 Sum_probs=134.3
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecC---CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGD---KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIW 177 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w 177 (422)
.+.+..+.+.+.+.+| +|| .|+..+.+ ..|.+||+.+++.......+......+|+|||+.++ .+.++...+|
T Consensus 188 ~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 267 (427)
T PRK02889 188 AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIY 267 (427)
T ss_pred ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEE
Confidence 3455567788888999 577 67666542 459999999887654333333445689999999887 4556665555
Q ss_pred --ECCCCcee-eecCCCceeeeEEEeeeCCeEEEecC-CCeEEEEe--CCCcceeeeeecCCccEEEEEecCC-CEEEEE
Q 014590 178 --RRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCE-DGTARVFD--MYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 178 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd--~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
|+.++... +....+ ......+++++..++..+. ++...+|. ..+++.... ..+........|+|+ ++++..
T Consensus 268 ~~d~~~~~~~~lt~~~~-~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g~~~~~~~~SpDG~~Ia~~ 345 (427)
T PRK02889 268 TVNADGSGLRRLTQSSG-IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTGSYNTSPRISPDGKLLAYI 345 (427)
T ss_pred EEECCCCCcEECCCCCC-CCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCCCCcCceEECCCCCEEEEE
Confidence 55544422 222222 2234568888887665543 45556664 444443222 222233446789987 777766
Q ss_pred cCCC---cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCC---eEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 251 SSLG---SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAG---YASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 251 ~~dg---~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
+.++ .|.+||+.+++.. .......|+|||+.|+.++.++ .+.+.+.. +.....+..+.+.+...+ |+
T Consensus 346 s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~-ws 423 (427)
T PRK02889 346 SRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRLSVQGGDVREPS-WG 423 (427)
T ss_pred EccCCcEEEEEEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEeecCCCCCCCCc-cC
Confidence 6554 6999999877654 3456789999999988877544 36666663 555556665666677776 66
Q ss_pred c
Q 014590 320 N 320 (422)
Q Consensus 320 ~ 320 (422)
|
T Consensus 424 p 424 (427)
T PRK02889 424 P 424 (427)
T ss_pred C
Confidence 5
No 241
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.37 E-value=3.5e-09 Score=94.14 Aligned_cols=214 Identities=14% Similarity=0.142 Sum_probs=138.0
Q ss_pred cCCeEEEEEcCCCeEEEeeeCCCcee--------eEEEecCCCeEE-Ee-c-CCeEEEEECCCCceeeecCCCceeeeEE
Q 014590 130 GDKVMRLWSLEGYKCVEEYSLPNAAS--------LVDFDFDESKIV-GL-I-GTRICIWRRNGLRSVFPSREGTFMKGLC 198 (422)
Q Consensus 130 ~dg~v~iwd~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~-~~-~-~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 198 (422)
.+..|.+||..+++.+..+..+.... .+++++||++++ .. . ++.|.+.|+.+++.+....-.....+..
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~ 154 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFP 154 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 57899999999999999998754433 799999999988 33 2 7899999999988664333322111111
Q ss_pred EeeeCCeEEEecCCCeEEEEeCC-Ccce-eee---eecCCccEEE-EEecC-C-CEEEEEcCCCcEEEEeCCCCccc---
Q 014590 199 MRYFDPEAVVGCEDGTARVFDMY-SRKC-SQI---IRMHCAPVTS-LSLSE-D-QLIISGSSLGSIAISGLSSDQRL--- 267 (422)
Q Consensus 199 ~~~~~~~l~~~~~d~~i~iwd~~-~~~~-~~~---~~~~~~~v~~-l~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~--- 267 (422)
. ......+-+.||......+. +|+. ... +.....++.. =.+.+ + ..+... .+|+|.+.|+......
T Consensus 155 t--~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs-~eG~V~~id~~~~~~~~~~ 231 (352)
T TIGR02658 155 T--ANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPT-YTGKIFQIDLSSGDAKFLP 231 (352)
T ss_pred e--cCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEe-cCCeEEEEecCCCcceecc
Confidence 1 11112222344444332222 2221 111 1110011100 02233 4 444444 4499999996443222
Q ss_pred ----------------cceEeEEEecCCCEEEEEe----------CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC
Q 014590 268 ----------------TGIKTLCYNPCSRLVFAGT----------TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 268 ----------------~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
+.+.-++++|+++.+++.. ..+.|.++|..+++.+..+... ..+..++ ++||
T Consensus 232 ~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-~~~~~ia-vS~D 309 (352)
T TIGR02658 232 AIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-HEIDSIN-VSQD 309 (352)
T ss_pred eeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC-CceeeEE-ECCC
Confidence 3344599999999988853 2257999999999999887753 4688999 9999
Q ss_pred CC-EEEEEe-cCCeEEEEECCCCceEEEe
Q 014590 322 TS-TLVVGG-IDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 322 ~~-~l~s~~-~dg~v~vwd~~~~~~~~~~ 348 (422)
++ +|++.. .++.|.++|..+++.+.++
T Consensus 310 gkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 310 AKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 99 887666 5788999999999999987
No 242
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.37 E-value=1.5e-08 Score=90.23 Aligned_cols=246 Identities=13% Similarity=0.092 Sum_probs=161.4
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--Ee---------cCCeEEEEECCCCceeeecCC--------Cc
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GL---------IGTRICIWRRNGLRSVFPSRE--------GT 192 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~---------~~~~i~~w~~~~~~~~~~~~~--------~~ 192 (422)
++|.+.|..+++.+.++........+ ++||++.++ .+ .+..|.+||..+.+.+-.... +.
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~ 105 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGT 105 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccC
Confidence 89999999999999999987666665 999999987 34 478999999999886633332 33
Q ss_pred eeeeEEEeeeCCeEEEec-C-CCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCC-Cccc--
Q 014590 193 FMKGLCMRYFDPEAVVGC-E-DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSS-DQRL-- 267 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~-~~~~-- 267 (422)
......++++++.+++.. . +..|.+.|+.+++.+..+.... ...-...+++... +-+.||......+.+ |+..
T Consensus 106 ~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~~-~~~~Dg~~~~v~~d~~g~~~~~ 183 (352)
T TIGR02658 106 YPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTFF-MHCRDGSLAKVGYGTKGNPKIK 183 (352)
T ss_pred ccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCccE-EEeecCceEEEEecCCCceEEe
Confidence 344788888998877655 3 7899999999999888776432 2222222222222 222344333322211 1111
Q ss_pred -cce---------EeEEEec-CCCEEEEEeCCCeEEEEECCC-----Ceeeeeecc-------CCCceeeeeeEecCCCE
Q 014590 268 -TGI---------KTLCYNP-CSRLVFAGTTAGYASCWDLRT-----MKSLWETRI-------SPNVVYSLQHLQNDTST 324 (422)
Q Consensus 268 -~~v---------~~~~~~~-~~~~l~~g~~dg~i~iwd~~~-----~~~~~~~~~-------~~~~v~~l~~~s~~~~~ 324 (422)
..+ ..-.|.+ +|+++++..+ |.|.+.|+.. .+....+.. ..+...-++ +++++++
T Consensus 184 ~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia-~~~dg~~ 261 (352)
T TIGR02658 184 PTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVA-YHRARDR 261 (352)
T ss_pred eeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEE-EcCCCCE
Confidence 000 0003455 8888888877 9999999643 222222211 223344477 9999998
Q ss_pred EEEEe----------cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEE
Q 014590 325 LVVGG----------IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCL 394 (422)
Q Consensus 325 l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i 394 (422)
++... ..+.|.++|..+++.+..+... ..+..+
T Consensus 262 lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-------------------------------------~~~~~i 304 (352)
T TIGR02658 262 IYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-------------------------------------HEIDSI 304 (352)
T ss_pred EEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC-------------------------------------CceeeE
Confidence 88743 1257999999999999988652 356777
Q ss_pred Ee--cCE-EEEEEe-CCCeEEEEEccCCC
Q 014590 395 AV--GMK-KVVTTH-NSKYIRLWKFNYSD 419 (422)
Q Consensus 395 ~~--~~~-~l~s~s-~Dg~i~iW~~~~~~ 419 (422)
++ |++ +|++.. .++.|.+.|..+++
T Consensus 305 avS~Dgkp~lyvtn~~s~~VsViD~~t~k 333 (352)
T TIGR02658 305 NVSQDAKPLLYALSTGDKTLYIFDAETGK 333 (352)
T ss_pred EECCCCCeEEEEeCCCCCcEEEEECcCCe
Confidence 77 566 666555 67889999987764
No 243
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.36 E-value=8.1e-11 Score=99.41 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=152.4
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe-----EEEeeeCCC-------------ceeeEEEecCCCe---EE
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK-----CVEEYSLPN-------------AASLVDFDFDESK---IV 167 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~-------------~~~~~~~~~~~~~---l~ 167 (422)
..+.|.+|.| ..| +||||..+|.|.++.-.... ....++.|+ .+.-+.|.++++. |+
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 4567889999 466 99999999999999644321 233333332 2334667666543 44
Q ss_pred EecCCeEEEEECCCCcee----------------------eecC-------------CCceeeeEEEee--eCCeEEEec
Q 014590 168 GLIGTRICIWRRNGLRSV----------------------FPSR-------------EGTFMKGLCMRY--FDPEAVVGC 210 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~~~----------------------~~~~-------------~~~~~~~~~~~~--~~~~l~~~~ 210 (422)
.+.|.+|++|.+...... ...+ ..|...+-.++. +...+++ +
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS-A 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS-A 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee-c
Confidence 899999999986432110 0000 112222222332 2333444 4
Q ss_pred CCCeEEEEeCCCcc-eee--eeec-----CCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------------
Q 014590 211 EDGTARVFDMYSRK-CSQ--IIRM-----HCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL------------- 267 (422)
Q Consensus 211 ~d~~i~iwd~~~~~-~~~--~~~~-----~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~------------- 267 (422)
.|=.|.+|+++-.. ... -++. -+.-|++..|+|. +.++-.+..|+|++-|++....-
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 56789999986322 111 1122 2346788899986 78888999999999999843321
Q ss_pred ----------cceEeEEEecCCCEEEEEeCCCeEEEEECC-CCeeeeeeccCCC------------ce---eeeeeEecC
Q 014590 268 ----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR-TMKSLWETRISPN------------VV---YSLQHLQND 321 (422)
Q Consensus 268 ----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~------------~v---~~l~~~s~~ 321 (422)
..|..+.|+++|+++++-.. -+|++||+. ..+++.+++.|.. .| ..++ |+.+
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~-~sg~ 340 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECS-WSGN 340 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEE-EcCC
Confidence 78889999999999998765 469999994 5677777766642 11 2344 8888
Q ss_pred CCEEEEEecCCeEEEEECCCCc
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
+.+++||+....+++++...|.
T Consensus 341 ~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 341 DSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred cceEecccccceEEEecCCCCc
Confidence 8899999999999999976554
No 244
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.35 E-value=4.4e-11 Score=114.59 Aligned_cols=180 Identities=16% Similarity=0.111 Sum_probs=144.2
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEE--EeeeCC---eEEEecCCCeEEEEeCCCcceeeeee
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLC--MRYFDP---EAVVGCEDGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~ 230 (422)
..+..++..++ ++.++.+.+||............+......+ ...++. ++++|+--+.|.+|+....+.-..+.
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~ 172 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLK 172 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceec
Confidence 45556677777 9999999999998877665555444332222 222222 28999999999999987444334578
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
+|.+.|.++.++.+ .++++.|.|.++++|++.+.+.. ..+..++|.|+ .+++++.|-+.++|+.. +..
T Consensus 173 GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~ 249 (967)
T KOG0974|consen 173 GHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQ 249 (967)
T ss_pred ccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cce
Confidence 99999999999955 89999999999999999998876 78889999888 99999999999999765 555
Q ss_pred eeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 302 LWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 302 ~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+.++..|. ..+..++ .+++...++|++.||.+++||+.
T Consensus 250 l~~y~~h~g~~iw~~~-~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 250 LEVYDEHSGKGIWKIA-VPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred ehhhhhhhhcceeEEE-EcCCceEEEeeccCcchhhhhhh
Confidence 66888886 6788998 88888899999999999999875
No 245
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.35 E-value=8.5e-10 Score=99.21 Aligned_cols=258 Identities=12% Similarity=0.156 Sum_probs=163.1
Q ss_pred ceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEE------ecC-----CeEEEEECCC
Q 014590 114 GVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVG------LIG-----TRICIWRRNG 181 (422)
Q Consensus 114 ~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~-----~~i~~w~~~~ 181 (422)
.+...++ ++|.+...+.+..++|++..++..+.+.... ....+.|+|-+.+|.. ..+ -.+.+|++++
T Consensus 36 ~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~~~-~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet 114 (566)
T KOG2315|consen 36 PCNVFAYSNNGRLFAYSDNQVVKVFEIATLKVVLCVELK-KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVET 114 (566)
T ss_pred cceeEEEcCCCcEEEEEcCCeEEEEEccCCcEEEEeccc-eeeeeeecccccccccccccccccCCCCCCCceeeeeecc
Confidence 3445556 4667777777889999999988655555544 6777999999988752 122 3477999998
Q ss_pred CceeeecCCCce-eeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC---CEEEE-----EcC
Q 014590 182 LRSVFPSREGTF-MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLIIS-----GSS 252 (422)
Q Consensus 182 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~l~s-----~~~ 252 (422)
+........... .....++.+.. +++--..+.+++|+...-+.+. -+-|...|..+.++|+ ..+++ .+.
T Consensus 115 ~~~~s~~q~k~Q~~W~~qfs~dEs-l~arlv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGa 192 (566)
T KOG2315|consen 115 GVQRSQIQKKMQNGWVPQFSIDES-LAARLVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGA 192 (566)
T ss_pred ceehhheehhhhcCcccccccchh-hhhhhhcceEEEEecCCcccee-eeeeccceeeEEecCCCCCceEEEEccCCCCC
Confidence 543322211111 12233333222 3333334578888875432211 1224455566666654 22222 123
Q ss_pred CCcEEEEeCCCC---------------------------------------------------------ccc------cc
Q 014590 253 LGSIAISGLSSD---------------------------------------------------------QRL------TG 269 (422)
Q Consensus 253 dg~i~iwd~~~~---------------------------------------------------------~~~------~~ 269 (422)
-+.+++|..... ... ++
T Consensus 193 Pa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GP 272 (566)
T KOG2315|consen 193 PASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGP 272 (566)
T ss_pred CcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCC
Confidence 344555554311 111 89
Q ss_pred eEeEEEecCCCEEEE--EeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec---CCeEEEEECCCCce
Q 014590 270 IKTLCYNPCSRLVFA--GTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI---DGVLRVLDQNTGEV 344 (422)
Q Consensus 270 v~~~~~~~~~~~l~~--g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~---dg~v~vwd~~~~~~ 344 (422)
|.++.|+|+++.+++ |..=.++.|||++ +.++..+. +++-+++- |+|.|++|+.++- -|.|-|||+.+.++
T Consensus 273 Vhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~-fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 273 VHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAF-FNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred ceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceE-ECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 999999999987665 4466789999988 67776664 45556675 9999999888775 48899999999888
Q ss_pred EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeC------CCeEEEEEcc
Q 014590 345 LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHN------SKYIRLWKFN 416 (422)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~------Dg~i~iW~~~ 416 (422)
+..+... .-+-++| ||.+|+|+.. |..++||+..
T Consensus 349 i~~~~a~--------------------------------------~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 349 IAKFKAA--------------------------------------NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred ccccccC--------------------------------------CceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 8877552 2233455 7888988864 7889999875
No 246
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.34 E-value=3.3e-11 Score=107.73 Aligned_cols=145 Identities=19% Similarity=0.225 Sum_probs=114.4
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCccEEEEEecCC---CEEEEEcCCCcEEEEeCCCCccc---
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPVTSLSLSED---QLIISGSSLGSIAISGLSSDQRL--- 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~---~~l~s~~~dg~i~iwd~~~~~~~--- 267 (422)
.++.|..++..|++|+.|-.+.|||.-..+.++.+ .+|.+.|.++.|-|. .++++|..|..|+++|+...+.-
T Consensus 54 N~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d 133 (758)
T KOG1310|consen 54 NCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMD 133 (758)
T ss_pred cceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccc
Confidence 45666667777999999999999999888877776 589999999999973 79999999999999999852221
Q ss_pred --------------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCe-------ee---eeeccCCCceeeeeeEecCC
Q 014590 268 --------------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMK-------SL---WETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 268 --------------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~-------~~---~~~~~~~~~v~~l~~~s~~~ 322 (422)
..|..++-.|++ ..+.++++||+|+-+|++... +. ..+...--...++. ++|..
T Consensus 134 ~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~lt-isp~r 212 (758)
T KOG1310|consen 134 HGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLT-ISPSR 212 (758)
T ss_pred cCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeee-ecCCC
Confidence 677888888888 889999999999999998521 11 11112223456777 77765
Q ss_pred C-EEEEEecCCeEEEEECC
Q 014590 323 S-TLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 323 ~-~l~s~~~dg~v~vwd~~ 340 (422)
. +|+.|+.|-..++||.+
T Consensus 213 p~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 213 PYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred CceEEecCCCchhhhhhhh
Confidence 4 89999999999999964
No 247
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.32 E-value=7.5e-09 Score=89.37 Aligned_cols=210 Identities=20% Similarity=0.166 Sum_probs=140.4
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceee-E-EEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEE
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASL-V-DFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV 207 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (422)
+|+|..||..+|+.+........... . ...+++..++ ++.++.+..||..+++.+............ ....+..++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~~v~ 80 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA-PVVDGGRVY 80 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG-EEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce-eeecccccc
Confidence 68999999999999998876322222 2 2343455554 789999999999999876443322221111 244566677
Q ss_pred EecCCCeEEEEeCCCcceeeee-ecCCc-----cEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------c-c-----
Q 014590 208 VGCEDGTARVFDMYSRKCSQII-RMHCA-----PVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------T-G----- 269 (422)
Q Consensus 208 ~~~~d~~i~iwd~~~~~~~~~~-~~~~~-----~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~-~----- 269 (422)
.++.++.+..+|..+|+.+... ..... ......+. ++.++.+..++.|..+|+++|+.+ . .
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 159 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPI 159 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--E
T ss_pred cccceeeeEecccCCcceeeeeccccccccccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcce
Confidence 7888889999999999998884 32211 11122222 567888888999999999999886 1 1
Q ss_pred -----eEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 270 -----IKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 270 -----v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
+..-....++ .++.++.++.+..+|+.+++.+.+.. ...+..+ ...++..|+.++.++.|..||+++|+.
T Consensus 160 ~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~--~~~~~~~l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 160 SSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSL--PSVDGGTLYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp EEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECEC--EECCCTEEEEEETTTEEEEEETTTTEE
T ss_pred eeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCCccCC--ceeeCCEEEEEeCCCEEEEEECCCCCE
Confidence 1122222234 77777777754444999998776444 2223332 336778888888999999999999988
Q ss_pred EEE
Q 014590 345 LSR 347 (422)
Q Consensus 345 ~~~ 347 (422)
+.+
T Consensus 235 ~W~ 237 (238)
T PF13360_consen 235 VWQ 237 (238)
T ss_dssp EEE
T ss_pred EeE
Confidence 754
No 248
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.32 E-value=2e-10 Score=94.82 Aligned_cols=147 Identities=11% Similarity=0.170 Sum_probs=105.4
Q ss_pred eeEEEecCCCeEE--Eec---------CCeEEEEECCCC--c-eeeecCCCceeeeEEEeeeCCeE--EEecCCCeEEEE
Q 014590 155 SLVDFDFDESKIV--GLI---------GTRICIWRRNGL--R-SVFPSREGTFMKGLCMRYFDPEA--VVGCEDGTARVF 218 (422)
Q Consensus 155 ~~~~~~~~~~~l~--~~~---------~~~i~~w~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l--~~~~~d~~i~iw 218 (422)
..+.|+++|+.|+ ... -+...+|.++.. . ..........+..++|++.+..+ +.|..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 3477888888876 331 134555555332 2 23333333346788899988884 445567899999
Q ss_pred eCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC---CCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeC--
Q 014590 219 DMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS---LGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTT-- 287 (422)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~---dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~-- 287 (422)
|++ ++.+..+. ...++.+.|+|+ +++++++. .|.+.+||.++.+.+ ..+..++|+|||+++++++.
T Consensus 89 d~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTSP 165 (194)
T ss_pred cCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEecc
Confidence 996 66666664 567889999997 78888764 467999999988777 67889999999999999874
Q ss_pred ----CCeEEEEECCCCeeeeee
Q 014590 288 ----AGYASCWDLRTMKSLWET 305 (422)
Q Consensus 288 ----dg~i~iwd~~~~~~~~~~ 305 (422)
|+.++||+.. |+.+.+.
T Consensus 166 r~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 166 RLRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred ceeccccEEEEEec-CeEeEec
Confidence 6778999985 6666543
No 249
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.32 E-value=5.3e-09 Score=97.28 Aligned_cols=224 Identities=12% Similarity=0.101 Sum_probs=147.4
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCcee--------eEE--Ee-cCCCeEEEecCCeEEEEECCCCceeee
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS--------LVD--FD-FDESKIVGLIGTRICIWRRNGLRSVFP 187 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------~~~--~~-~~~~~l~~~~~~~i~~w~~~~~~~~~~ 187 (422)
.+.++.++.++.+|.+.-+|.++|+.+.......... .+. .. .++..++++.++.+..+|.++++.++.
T Consensus 66 vv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~ 145 (394)
T PRK11138 66 AVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQ 145 (394)
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccc
Confidence 3457788888889999999999999988776543110 011 11 133444488899999999999987765
Q ss_pred cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEE-EEecC---CCEEEEEcCCCcEEEEeCCC
Q 014590 188 SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTS-LSLSE---DQLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~-l~~~~---~~~l~s~~~dg~i~iwd~~~ 263 (422)
........ ......+..++.+..++.+..+|.++|+.+..+......+.. ...+| ++.++.++.+|.+..+|..+
T Consensus 146 ~~~~~~~~-ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~ 224 (394)
T PRK11138 146 TKVAGEAL-SRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQ 224 (394)
T ss_pred ccCCCcee-cCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccC
Confidence 44332211 111123456778888999999999999998877543111100 00112 35677788899999999998
Q ss_pred Cccc--cce------------EeEEEec--CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEE
Q 014590 264 DQRL--TGI------------KTLCYNP--CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 264 ~~~~--~~v------------~~~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s 327 (422)
|+.+ ..+ ..+..+| .+..+++++.+|.+..+|..+|+.+++..... ...+. ..+..|+.
T Consensus 225 G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~--~~~~~---~~~~~vy~ 299 (394)
T PRK11138 225 GQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS--VNDFA---VDGGRIYL 299 (394)
T ss_pred ChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC--ccCcE---EECCEEEE
Confidence 8766 100 0111122 35567778889999999999998887654321 12222 24667888
Q ss_pred EecCCeEEEEECCCCceEEEe
Q 014590 328 GGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~~~~~ 348 (422)
++.+|.+..+|..+|+.+...
T Consensus 300 ~~~~g~l~ald~~tG~~~W~~ 320 (394)
T PRK11138 300 VDQNDRVYALDTRGGVELWSQ 320 (394)
T ss_pred EcCCCeEEEEECCCCcEEEcc
Confidence 889999999999999876544
No 250
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.31 E-value=2.8e-09 Score=100.29 Aligned_cols=212 Identities=14% Similarity=0.054 Sum_probs=135.6
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC---CeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG---TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~---~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
..|.++|...................+|+|||+.++ +..+ ..|++||+.++... .....+. ....++.++++.+
T Consensus 170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~-~~~~~~spDg~~l 248 (417)
T TIGR02800 170 YELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGM-NGAPAFSPDGSKL 248 (417)
T ss_pred ceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCC-ccceEECCCCCEE
Confidence 467888876444433333333456688999999998 4432 57999999887543 3333332 2346777788775
Q ss_pred E-EecCCC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC-CC--cEEEEeCCCCccc------cceEeE
Q 014590 207 V-VGCEDG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-LG--SIAISGLSSDQRL------TGIKTL 273 (422)
Q Consensus 207 ~-~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-dg--~i~iwd~~~~~~~------~~v~~~ 273 (422)
+ +.+.++ .|.+||+.+++... +..+........|+|+ +.++..+. ++ .|.++|+.+++.. ..+...
T Consensus 249 ~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~ 327 (417)
T TIGR02800 249 AVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASP 327 (417)
T ss_pred EEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCe
Confidence 5 444444 58889998775433 3334444556788886 66655543 33 5888888766543 456678
Q ss_pred EEecCCCEEEEEeCCC---eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCC---eEEEEECCCCceEEE
Q 014590 274 CYNPCSRLVFAGTTAG---YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG---VLRVLDQNTGEVLSR 347 (422)
Q Consensus 274 ~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~ 347 (422)
.|+|+|++++.++.++ .|.+||+.++... .+... ....... |+|+++.|+..+.++ .+++.+.. +.....
T Consensus 328 ~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~-~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~ 403 (417)
T TIGR02800 328 SWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPS-FAPNGRMILYATTRGGRGVLGLVSTD-GRFRAR 403 (417)
T ss_pred EECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCce-ECCCCCEEEEEEeCCCcEEEEEEECC-CceeeE
Confidence 9999999999988776 7999999875432 22222 2234456 899999888877654 45555543 544444
Q ss_pred ee
Q 014590 348 CV 349 (422)
Q Consensus 348 ~~ 349 (422)
+.
T Consensus 404 ~~ 405 (417)
T TIGR02800 404 LP 405 (417)
T ss_pred CC
Confidence 43
No 251
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.30 E-value=2.5e-10 Score=97.15 Aligned_cols=159 Identities=17% Similarity=0.216 Sum_probs=116.3
Q ss_pred EEEecCCCeEEEEeCCCcceeeeee-cCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc---------------
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL--------------- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~--------------- 267 (422)
++++..|-.|++||-.. ++...++ .....|.+++|-|. ..++.|+. +.|.+|.....-..
T Consensus 113 fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl 190 (445)
T KOG2139|consen 113 FAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVL 190 (445)
T ss_pred hhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhhe
Confidence 88899999999999866 4333333 33567999999985 56766665 56889976421111
Q ss_pred -----cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 268 -----TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.+|++|.|++||..+++++. |..|.|||..++..+.-..-..+.+.-+. ||||+.+|++++-|+..++|+...
T Consensus 191 ~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLk-wSPdgd~lfaAt~davfrlw~e~q 269 (445)
T KOG2139|consen 191 QDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLK-WSPDGDVLFAATCDAVFRLWQENQ 269 (445)
T ss_pred eCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEE-EcCCCCEEEEecccceeeeehhcc
Confidence 78999999999999998874 67899999998766543333446788888 999999999999999999995543
Q ss_pred CceEEEeeecCCcccccCCCCCCeEE
Q 014590 342 GEVLSRCVMDIGSASSSSNKVSGVIE 367 (422)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~s~d~~i~ 367 (422)
..........++.+..+.++++|.-.
T Consensus 270 ~wt~erw~lgsgrvqtacWspcGsfL 295 (445)
T KOG2139|consen 270 SWTKERWILGSGRVQTACWSPCGSFL 295 (445)
T ss_pred cceecceeccCCceeeeeecCCCCEE
Confidence 33223333444466677778877643
No 252
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.29 E-value=7.1e-10 Score=100.32 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=139.2
Q ss_pred eEEEecCCCeEEEEeCCCcceeeeeecC---CccEEEEEe------cC--------------C-CEEEEEcCCCcEEEEe
Q 014590 205 EAVVGCEDGTARVFDMYSRKCSQIIRMH---CAPVTSLSL------SE--------------D-QLIISGSSLGSIAISG 260 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~l~~------~~--------------~-~~l~s~~~dg~i~iwd 260 (422)
++|....||.+++||...++....+... ++...+..| +| + ..++-|...|.|.+|+
T Consensus 7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys 86 (541)
T KOG4547|consen 7 YFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYS 86 (541)
T ss_pred eEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEE
Confidence 4788889999999999988766655321 222222222 12 3 4788889999999999
Q ss_pred CCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 261 LSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 261 ~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
+..|+.. +.|.++.++.+-..|.+++.|+.+..|+....+.++.+.+.+..+.+++ .+|||+.+++++
T Consensus 87 ~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~-is~D~~~l~~as-- 163 (541)
T KOG4547|consen 87 VAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLC-ISPDGKILLTAS-- 163 (541)
T ss_pred ecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEE-EcCCCCEEEecc--
Confidence 9888765 8899999988889999999999999999999999999999988999998 999999999885
Q ss_pred CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--c-----CEE-EEE
Q 014590 332 GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--G-----MKK-VVT 403 (422)
Q Consensus 332 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~-----~~~-l~s 403 (422)
++|++||+++++.+..|.+| .++|++++| + |.+ |.+
T Consensus 164 ~~ik~~~~~~kevv~~ftgh------------------------------------~s~v~t~~f~~~~~g~~G~~vLss 207 (541)
T KOG4547|consen 164 RQIKVLDIETKEVVITFTGH------------------------------------GSPVRTLSFTTLIDGIIGKYVLSS 207 (541)
T ss_pred ceEEEEEccCceEEEEecCC------------------------------------CcceEEEEEEEeccccccceeeec
Confidence 67999999999999999664 558888888 3 444 445
Q ss_pred EeCCCeEEEEEccC
Q 014590 404 THNSKYIRLWKFNY 417 (422)
Q Consensus 404 ~s~Dg~i~iW~~~~ 417 (422)
+..+.-+.+|-+..
T Consensus 208 a~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 208 AAAERGITVWVVEK 221 (541)
T ss_pred cccccceeEEEEEc
Confidence 56677788888765
No 253
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.29 E-value=1.5e-09 Score=102.02 Aligned_cols=210 Identities=13% Similarity=0.031 Sum_probs=132.3
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecC---CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-E-ecC--CeEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGD---KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIG--TRIC 175 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~--~~i~ 175 (422)
.+.+..+...+.+..| +|| +|+.++.+ ..|.+||+.+++..............+|+||++.|+ . ..+ ..|.
T Consensus 182 ~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~ 261 (417)
T TIGR02800 182 PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIY 261 (417)
T ss_pred CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEE
Confidence 3445556666777888 566 67666543 479999999886554433333445589999999887 3 333 4688
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-CC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-DG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
+|++.++................+.+++..++..+. ++ .|.++|+.+++.. .+..+...+....|+|+ ++++.++
T Consensus 262 ~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~ 340 (417)
T TIGR02800 262 VMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVH 340 (417)
T ss_pred EEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEE
Confidence 899987653321111122223456677777665543 33 6888888776643 33334556677889987 7777777
Q ss_pred CCC---cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCC---eEEEEECCCCeeeeeeccCCCceeeee
Q 014590 252 SLG---SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAG---YASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 252 ~dg---~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
.++ .|.+||+.++... ......+|+|+|+.|+..+.++ .+++.+.. +.....+..+.+.+..+.
T Consensus 341 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~~~~ 415 (417)
T TIGR02800 341 REGGGFNIAVMDLDGGGERVLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVREPA 415 (417)
T ss_pred ccCCceEEEEEeCCCCCeEEccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcCCCC
Confidence 665 7899998876443 2345568999999888877654 35555543 444445544444444433
No 254
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.28 E-value=8e-08 Score=87.49 Aligned_cols=256 Identities=12% Similarity=0.129 Sum_probs=162.7
Q ss_pred EEEEecC----CeEEEEEc--CCCeE--EEeeeCCCceeeEEEecCCCeEE-Eec----CCeEEEEECCCC--ce--eee
Q 014590 125 ILTGVGD----KVMRLWSL--EGYKC--VEEYSLPNAASLVDFDFDESKIV-GLI----GTRICIWRRNGL--RS--VFP 187 (422)
Q Consensus 125 l~s~~~d----g~v~iwd~--~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~----~~~i~~w~~~~~--~~--~~~ 187 (422)
++.|+.. +.|.+|++ ++++. +..+........++++++++.|. +.. ++.|..|++... .. +-.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 4556655 78998888 55544 34444556677799999999998 333 578999988764 22 111
Q ss_pred cC-CCceeeeEEEeeeCCeEEEec-CCCeEEEEeCCC-cceeee---ee----------cCCccEEEEEecCC-CEEEEE
Q 014590 188 SR-EGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYS-RKCSQI---IR----------MHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 188 ~~-~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~~---~~----------~~~~~v~~l~~~~~-~~l~s~ 250 (422)
.. .+.....+++.+++..++++. .+|.|.++++.. |..... +. .......++.++|+ +++++.
T Consensus 82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~ 161 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP 161 (345)
T ss_dssp EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence 11 344444566667777766654 689999999976 443222 21 11234678999987 655554
Q ss_pred -cCCCcEEEEeCCCCc--cc----------cceEeEEEecCCCEEEEEe-CCCeEEEEECC--CCe--eeeeecc----C
Q 014590 251 -SSLGSIAISGLSSDQ--RL----------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLR--TMK--SLWETRI----S 308 (422)
Q Consensus 251 -~~dg~i~iwd~~~~~--~~----------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~--~~~--~~~~~~~----~ 308 (422)
-....|.+|++.... .. .....++|+|+++++++.. .++.|.++++. ++. .+..... .
T Consensus 162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 241 (345)
T PF10282_consen 162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF 241 (345)
T ss_dssp ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS
T ss_pred ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc
Confidence 345589999987655 21 7789999999999887766 47889999888 442 2222211 1
Q ss_pred --CCceeeeeeEecCCCEEEEEe-cCCeEEEEECC--CCceE--EEeeecCCcccccCCCCCCeEEeeeccccCCCcccc
Q 014590 309 --PNVVYSLQHLQNDTSTLVVGG-IDGVLRVLDQN--TGEVL--SRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCID 381 (422)
Q Consensus 309 --~~~v~~l~~~s~~~~~l~s~~-~dg~v~vwd~~--~~~~~--~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~ 381 (422)
......|. ++|||++|+++. .++.|.+|++. +|+.. ..+...
T Consensus 242 ~~~~~~~~i~-ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~------------------------------ 290 (345)
T PF10282_consen 242 TGENAPAEIA-ISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTG------------------------------ 290 (345)
T ss_dssp CSSSSEEEEE-E-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEES------------------------------
T ss_pred cccCCceeEE-EecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCC------------------------------
Confidence 12567788 999999887765 57789999983 34332 222211
Q ss_pred cCCCCCCCCeEEEEe--cCEEEEEEe-CCCeEEEEEccC
Q 014590 382 RIPKTIRPPITCLAV--GMKKVVTTH-NSKYIRLWKFNY 417 (422)
Q Consensus 382 ~~~~~h~~~v~~i~~--~~~~l~s~s-~Dg~i~iW~~~~ 417 (422)
......+++ +|++|+++. .++.|.+|+++.
T Consensus 291 ------G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 291 ------GKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp ------SSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred ------CCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 123567777 677777666 667999998853
No 255
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=4.8e-09 Score=98.89 Aligned_cols=211 Identities=17% Similarity=0.086 Sum_probs=132.8
Q ss_pred eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC---CeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEE
Q 014590 133 VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG---TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAV 207 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~---~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 207 (422)
.|.++|.+.+................|+|||+.|+ .+.+ ..|.+|++.++... +....+. .....+++++..++
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~-~~~~~~SpDG~~la 258 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGL-NGAPAWSPDGSKLA 258 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCC-cCCeEECCCCCEEE
Confidence 47777877554433334444556689999999987 4432 46999999887643 2222222 23467788888765
Q ss_pred -EecCCC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCC--cEEEEeCCCCccc------cceEeEE
Q 014590 208 -VGCEDG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLG--SIAISGLSSDQRL------TGIKTLC 274 (422)
Q Consensus 208 -~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg--~i~iwd~~~~~~~------~~v~~~~ 274 (422)
+.+.+| .|.++|+.+++... +..+........|+|+ +.++..+ .+| .|.++|+.+++.. .......
T Consensus 259 ~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~ 337 (430)
T PRK00178 259 FVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPR 337 (430)
T ss_pred EEEccCCCceEEEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceE
Confidence 444444 68888998776543 4445555667789987 5555444 333 5777888776543 2234568
Q ss_pred EecCCCEEEEEeCC-C--eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC---CeEEEEECCCCceEEEe
Q 014590 275 YNPCSRLVFAGTTA-G--YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 275 ~~~~~~~l~~g~~d-g--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~ 348 (422)
|+|+|+.++....+ + .|.++|+.+++.. .+.. ........ |+|+|+.++..+.+ ..+.++++. |.....+
T Consensus 338 ~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~-~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l 413 (430)
T PRK00178 338 LSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPS-VAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPL 413 (430)
T ss_pred ECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCce-ECCCCCEEEEEEecCCceEEEEEECC-CCceEEC
Confidence 99999999877643 2 5888999877543 2222 11223456 89999988776643 346667764 4444444
Q ss_pred e
Q 014590 349 V 349 (422)
Q Consensus 349 ~ 349 (422)
.
T Consensus 414 ~ 414 (430)
T PRK00178 414 P 414 (430)
T ss_pred c
Confidence 3
No 256
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=6.5e-09 Score=97.79 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=131.7
Q ss_pred eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec-C--CeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEE
Q 014590 133 VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI-G--TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAV 207 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~--~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 207 (422)
.+.++|....................|+|||+.++ .+. + ..|.++|+.+++.. +....+. .....+++++..++
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~-~~~~~wSPDG~~La 277 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGI-NGAPRFSPDGKKLA 277 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCC-cCCeeECCCCCEEE
Confidence 56777876544433334444556689999999988 433 2 36888999887643 2222222 23467888888765
Q ss_pred -EecCCCe--EEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCC--cEEEEeCCCCccc------cceEeEE
Q 014590 208 -VGCEDGT--ARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLG--SIAISGLSSDQRL------TGIKTLC 274 (422)
Q Consensus 208 -~~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg--~i~iwd~~~~~~~------~~v~~~~ 274 (422)
+.+.++. |.++|+.+++... +..+.......+|+|+ +.++..+ .++ .|.++|+.+++.. ......+
T Consensus 278 ~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~ 356 (448)
T PRK04792 278 LVLSKDGQPEIYVVDIATKALTR-ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGS 356 (448)
T ss_pred EEEeCCCCeEEEEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCee
Confidence 4555664 7788988776543 3444555677889987 5555443 334 4677787766543 2234568
Q ss_pred EecCCCEEEEEeCC-C--eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC-C--eEEEEECCCCceEEEe
Q 014590 275 YNPCSRLVFAGTTA-G--YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID-G--VLRVLDQNTGEVLSRC 348 (422)
Q Consensus 275 ~~~~~~~l~~g~~d-g--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-g--~v~vwd~~~~~~~~~~ 348 (422)
|+|||++++..+.+ + .|.++|+.+++.. .+... ....... |+|+|+.|+..+.+ | .+++++. +|.....+
T Consensus 357 ~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps-~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l 432 (448)
T PRK04792 357 ITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPS-VAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARL 432 (448)
T ss_pred ECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCce-ECCCCCEEEEEEecCCceEEEEEEC-CCCceEEC
Confidence 99999998876643 3 4667788877543 22222 1122345 89999987765543 3 3677776 46666665
Q ss_pred ee
Q 014590 349 VM 350 (422)
Q Consensus 349 ~~ 350 (422)
..
T Consensus 433 ~~ 434 (448)
T PRK04792 433 PA 434 (448)
T ss_pred cC
Confidence 44
No 257
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.26 E-value=9.6e-08 Score=87.00 Aligned_cols=233 Identities=12% Similarity=0.124 Sum_probs=149.8
Q ss_pred ceeEEEe-cCC-eEEEEec----CCeEEEEEcCCC--e--EEEeee-CCCceeeEEEecCCCeEE-E-ecCCeEEEEECC
Q 014590 114 GVDQCRM-KRG-LILTGVG----DKVMRLWSLEGY--K--CVEEYS-LPNAASLVDFDFDESKIV-G-LIGTRICIWRRN 180 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~----dg~v~iwd~~~~--~--~~~~~~-~~~~~~~~~~~~~~~~l~-~-~~~~~i~~w~~~ 180 (422)
....+++ +++ +|.+... ++.|..|++... + .+.... .......+++++++++++ + ..+|.+.++++.
T Consensus 38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 3445666 445 6766665 579999988763 3 344444 344455699999999998 3 368999999998
Q ss_pred CCcee------ee---------cCCCceeeeEEEeeeCCeEEE-ecCCCeEEEEeCCCcc--ee--eeee-cCCccEEEE
Q 014590 181 GLRSV------FP---------SREGTFMKGLCMRYFDPEAVV-GCEDGTARVFDMYSRK--CS--QIIR-MHCAPVTSL 239 (422)
Q Consensus 181 ~~~~~------~~---------~~~~~~~~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~--~~--~~~~-~~~~~v~~l 239 (422)
....+ .. ...+.....+.+.++++.+++ .-....|.+|++.... .. ..+. .....-+.+
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~ 197 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL 197 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence 63211 10 012233345666777777554 3445689999987654 21 2222 233456899
Q ss_pred EecCC-CE-EEEEcCCCcEEEEeCC--CCccc---------------cceEeEEEecCCCEEEEEe-CCCeEEEEECC--
Q 014590 240 SLSED-QL-IISGSSLGSIAISGLS--SDQRL---------------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLR-- 297 (422)
Q Consensus 240 ~~~~~-~~-l~s~~~dg~i~iwd~~--~~~~~---------------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~-- 297 (422)
+|+|+ ++ +++.-.+++|.++++. ++... .....++++|||++|+++. ..+.|.+|++.
T Consensus 198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~ 277 (345)
T PF10282_consen 198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPA 277 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTT
T ss_pred EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecC
Confidence 99987 54 4555678889999987 43322 2577899999999988876 46789999984
Q ss_pred CC--eeeeeeccCCCceeeeeeEecCCCEEEEEe-cCCeEEEEEC--CCCceEEE
Q 014590 298 TM--KSLWETRISPNVVYSLQHLQNDTSTLVVGG-IDGVLRVLDQ--NTGEVLSR 347 (422)
Q Consensus 298 ~~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~-~dg~v~vwd~--~~~~~~~~ 347 (422)
++ +.+..+.........++ ++|+|++|+++. .++.|.+|++ .+|.....
T Consensus 278 ~g~l~~~~~~~~~G~~Pr~~~-~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~ 331 (345)
T PF10282_consen 278 TGTLTLVQTVPTGGKFPRHFA-FSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPV 331 (345)
T ss_dssp TTTEEEEEEEEESSSSEEEEE-E-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCCCccEEE-EeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEe
Confidence 23 33334443344578898 999999988877 5678999976 46654433
No 258
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.26 E-value=4.7e-11 Score=106.98 Aligned_cols=208 Identities=14% Similarity=0.153 Sum_probs=144.4
Q ss_pred ccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC-------CeEEEeeeCCCceeeEEEecCCCeEEEec
Q 014590 100 EGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG-------YKCVEEYSLPNAASLVDFDFDESKIVGLI 170 (422)
Q Consensus 100 ~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (422)
-..-.+..+.||+..|..++- ++. -+++++.|++|++|.++. ..+..++..|....
T Consensus 723 ~~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i--------------- 787 (1034)
T KOG4190|consen 723 FDHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPI--------------- 787 (1034)
T ss_pred cceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcc---------------
Confidence 334467789999999999866 444 999999999999999863 22444444432211
Q ss_pred CCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--CCccEEEEEecCC---C
Q 014590 171 GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--HCAPVTSLSLSED---Q 245 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~---~ 245 (422)
..+.+..+.. ..++.||.|++||.--|+++..+.. ..+.+..+..-++ .
T Consensus 788 ------------------------~~igfL~~lr--~i~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~ 841 (1034)
T KOG4190|consen 788 ------------------------HDIGFLADLR--SIASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRH 841 (1034)
T ss_pred ------------------------cceeeeeccc--eeeeccCcceeecccccchhHhhhcCcccCCCceeEecccCcch
Confidence 1112222222 3345688899999877776553321 1122222333332 4
Q ss_pred EEEEE-cCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce
Q 014590 246 LIISG-SSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV 312 (422)
Q Consensus 246 ~l~s~-~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v 312 (422)
.++.| +...+++++|.+..... ..+.+++..+.|+.++++-.+|.|.+.|.++|+.+..++..+...
T Consensus 842 iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdl 921 (1034)
T KOG4190|consen 842 ILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDL 921 (1034)
T ss_pred heeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchh
Confidence 44444 78899999999987755 568899999999999999999999999999999998887766555
Q ss_pred eeeeeEecCCCEEEEEecCCeEEE-EECCCCceEEEeee
Q 014590 313 YSLQHLQNDTSTLVVGGIDGVLRV-LDQNTGEVLSRCVM 350 (422)
Q Consensus 313 ~~l~~~s~~~~~l~s~~~dg~v~v-wd~~~~~~~~~~~~ 350 (422)
..++ .|..+.|+....|.++.| |....|....+.+.
T Consensus 922 lqla--apsdq~L~~saldHslaVnWhaldgimh~q~kp 958 (1034)
T KOG4190|consen 922 LQLA--APSDQALAQSALDHSLAVNWHALDGIMHLQDKP 958 (1034)
T ss_pred hhhc--CchhHHHHhhcccceeEeeehhcCCeeeeccCC
Confidence 5565 377788888888999999 98776665555443
No 259
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.25 E-value=2.1e-09 Score=89.16 Aligned_cols=209 Identities=14% Similarity=0.189 Sum_probs=138.4
Q ss_pred CCeEEEEEcCCCeEEE--eeeC--CCceeeEEEec---CCCe-EE-EecCCeEEEEECCCCc--eeeecCCCceee----
Q 014590 131 DKVMRLWSLEGYKCVE--EYSL--PNAASLVDFDF---DESK-IV-GLIGTRICIWRRNGLR--SVFPSREGTFMK---- 195 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~--~~~~--~~~~~~~~~~~---~~~~-l~-~~~~~~i~~w~~~~~~--~~~~~~~~~~~~---- 195 (422)
-|.+.++++...+... ++.. +.....+.|.. ++.. ++ +...|.|.++...... ..+.+.......
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~ 124 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA 124 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence 4678888887655443 2221 22333344442 4442 33 7788999999876543 223333322211
Q ss_pred -eEEEeeeCCeEEEecCCCeEEEEeCCCcce--eeeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCC-ccc--
Q 014590 196 -GLCMRYFDPEAVVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSD-QRL-- 267 (422)
Q Consensus 196 -~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~-~~~-- 267 (422)
.+.+...+..++++-.+|.+.+-+...... ++..+.|.-+.+...|+. + +.+.+|+.|+.+..||++.. +.+
T Consensus 125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~ 204 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH 204 (339)
T ss_pred eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence 233444555689999999998666544433 447889999999999983 3 89999999999999999933 222
Q ss_pred ------cceEeEEEec-CCCEEEEEeCCCeEEEEECCC-CeeeeeeccCCCceeeeeeEecCCC--EEEEEecCCeEEEE
Q 014590 268 ------TGIKTLCYNP-CSRLVFAGTTAGYASCWDLRT-MKSLWETRISPNVVYSLQHLQNDTS--TLVVGGIDGVLRVL 337 (422)
Q Consensus 268 ------~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~s~~~~--~l~s~~~dg~v~vw 337 (422)
..|.++.-+| .+.++++|+.|..|++||.++ ++++..-... +.|+-+. .+|.-. .|+++-.+| .+|-
T Consensus 205 n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~-GGVWRi~-~~p~~~~~lL~~CMh~G-~ki~ 281 (339)
T KOG0280|consen 205 NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVG-GGVWRIK-HHPEIFHRLLAACMHNG-AKIL 281 (339)
T ss_pred cceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccc-cceEEEE-ecchhhhHHHHHHHhcC-ceEE
Confidence 7777877665 678999999999999999994 6776554433 7799998 766533 345554555 6777
Q ss_pred ECCCC
Q 014590 338 DQNTG 342 (422)
Q Consensus 338 d~~~~ 342 (422)
+...+
T Consensus 282 ~~~~~ 286 (339)
T KOG0280|consen 282 DSSDK 286 (339)
T ss_pred Eeccc
Confidence 76544
No 260
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.25 E-value=9.2e-11 Score=118.12 Aligned_cols=192 Identities=15% Similarity=0.194 Sum_probs=141.6
Q ss_pred eeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCC--CceeeEEEecCCCeEE-EecCCeEEEEECCCC
Q 014590 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~ 182 (422)
++-|-..|.++.- +.. +.+||+.||.|++|....++.+..+... ..+..+.|+.+|+.+. +..||.+.+|.....
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk 2283 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPK 2283 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCc
Confidence 3445556666655 333 8999999999999999999888777653 3444588999999987 899999999998732
Q ss_pred ceeeecCCCceeeeEEEeeeCCeEEEec---CCCeEEEEeCCCc---ceeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 183 RSVFPSREGTFMKGLCMRYFDPEAVVGC---EDGTARVFDMYSR---KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
.+.....+......+.+-+..+++++ .++.+.+||.--. ..+. ..|.+.++++++.|. +.+++|+.+|.
T Consensus 2284 --~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~ 2359 (2439)
T KOG1064|consen 2284 --PYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGE 2359 (2439)
T ss_pred --ceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCc
Confidence 22333333333444444445556554 4688999996321 2333 789999999999998 89999999999
Q ss_pred EEEEeCCCCccccceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 256 IAISGLSSDQRLTGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 256 i~iwd~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
|++||++..+.+..... +. ...++++|+..|.++||++..-..+.++.
T Consensus 2360 v~l~D~rqrql~h~~~~--~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2360 VCLFDIRQRQLRHTFQA--LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred EEEeehHHHHHHHHhhh--hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 99999998887733333 33 66799999999999999998776666654
No 261
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.23 E-value=6.8e-10 Score=93.95 Aligned_cols=217 Identities=16% Similarity=0.163 Sum_probs=148.9
Q ss_pred CCCeEEEecCCeEEEEECC-CCceeeecCCCceeeeEEEee--eCCeEEEecCCCeEEEEeCC----CcceeeeeecCCc
Q 014590 162 DESKIVGLIGTRICIWRRN-GLRSVFPSREGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMY----SRKCSQIIRMHCA 234 (422)
Q Consensus 162 ~~~~l~~~~~~~i~~w~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~ 234 (422)
++..+-.+.|.++++|--. .++.-..........+.++.+ ....|+.|-..|++.-+.+. .....+....|..
T Consensus 36 e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~ 115 (404)
T KOG1409|consen 36 EEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQA 115 (404)
T ss_pred CCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhc
Confidence 3344448999999999543 333211111112222333333 33448999999999887653 3345566778999
Q ss_pred cEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECC--CCeeeeee
Q 014590 235 PVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR--TMKSLWET 305 (422)
Q Consensus 235 ~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~ 305 (422)
++..+.|+ +...+++.+.|..+.---.+.+..+ ...+++.+.-. +...|...|.|.+-.+. ...++.++
T Consensus 116 ~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~ 193 (404)
T KOG1409|consen 116 RVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTF 193 (404)
T ss_pred ceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EEEecccccceEEEEEeecCCceEEEE
Confidence 99999998 4589999999998866666666666 22222222212 56677777777665443 45778899
Q ss_pred ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce-EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCC
Q 014590 306 RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV-LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIP 384 (422)
Q Consensus 306 ~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~-~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~ 384 (422)
.+|.+.+++++ |.+..+.|.+|..|..+.+||+.-.+- ...+.
T Consensus 194 ~~h~~~~~~l~-Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~----------------------------------- 237 (404)
T KOG1409|consen 194 NGHTGEVTCLK-WDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQ----------------------------------- 237 (404)
T ss_pred cCcccceEEEE-EcCCCcEEEeccccCceEEEeccCCcceeeeec-----------------------------------
Confidence 99999999999 999999999999999999999973332 22333
Q ss_pred CCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 385 KTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 385 ~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
+|...|..+.. .-+.+++++.||.|.+|+.+-
T Consensus 238 -gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 238 -GHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred -cchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence 34445666655 357899999999999999864
No 262
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=7.2e-09 Score=97.73 Aligned_cols=213 Identities=8% Similarity=-0.049 Sum_probs=131.6
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecC---CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCC--eEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGD---KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGT--RIC 175 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~--~i~ 175 (422)
.+.+..|...+....| +|| .|+..+.+ ..|.+||+.+++..............+|+|||+.++ ...++ .|.
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy 270 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIY 270 (430)
T ss_pred ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEE
Confidence 3455567777888888 577 66665533 368999999886654333333334589999999887 33344 688
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-C--CeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-D--GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
++|+.++................+++++..++..+. + ..|.++|+.+++...... .........|+|+ +.++..+
T Consensus 271 ~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~i~~~~ 349 (430)
T PRK00178 271 VMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-VGNYNARPRLSADGKTLVMVH 349 (430)
T ss_pred EEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCCccceEECCCCCEEEEEE
Confidence 889988764322222222334567777777655443 3 357778887776433221 1223345678887 6666554
Q ss_pred C-CC--cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCC---CeEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 252 S-LG--SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTA---GYASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 252 ~-dg--~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
. ++ .|.++|+.+++.. .......|+|+|+.++..+.+ ..|.++++. +.....+..+.+.+...+ |+|
T Consensus 350 ~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~-ws~ 427 (430)
T PRK00178 350 RQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPS-WSP 427 (430)
T ss_pred ccCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCc-cCC
Confidence 3 33 5888998877544 223356899999998877643 347777775 444444544455566666 655
No 263
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.22 E-value=1.1e-08 Score=88.34 Aligned_cols=208 Identities=16% Similarity=0.140 Sum_probs=138.6
Q ss_pred CCeEEEEECCCCceeeecCCCc-eeeeEE-EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEE
Q 014590 171 GTRICIWRRNGLRSVFPSREGT-FMKGLC-MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLII 248 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~ 248 (422)
+|+|..+|..+++.++....+. .....+ ....++.+++++.++.+..||..+|+.+..+.. .+++.......++.++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~ 80 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVY 80 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeeecccccc
Confidence 6789999998888775553322 222222 333677788888999999999999998888764 2222111122456667
Q ss_pred EEcCCCcEEEEeCCCCccc-c----------ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce-----
Q 014590 249 SGSSLGSIAISGLSSDQRL-T----------GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV----- 312 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~-~----------~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v----- 312 (422)
.++.++.+..+|..+|+.+ . .........++..++++..++.|..+|+++|+.+..........
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 160 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS 160 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE
T ss_pred cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee
Confidence 7778889999999999877 1 11122333357889999989999999999999998887644221
Q ss_pred -----eeeeeEecCCCEEEEEecCCe-EEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCC
Q 014590 313 -----YSLQHLQNDTSTLVVGGIDGV-LRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKT 386 (422)
Q Consensus 313 -----~~l~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~ 386 (422)
.+-. ...++ .++.++.++. +.+ |+.+++.+.... ..
T Consensus 161 ~~~~~~~~~-~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~--------------------------------- 202 (238)
T PF13360_consen 161 SFSDINGSP-VISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP--IS--------------------------------- 202 (238)
T ss_dssp EETTEEEEE-ECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS---------------------------------
T ss_pred eecccccce-EEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CC---------------------------------
Confidence 1111 22334 7777777775 555 999998664322 11
Q ss_pred CCCCeEE-EEecCEEEEEEeCCCeEEEEEccCCCC
Q 014590 387 IRPPITC-LAVGMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 387 h~~~v~~-i~~~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.+.. ...++..|+.++.|+.|..||+.+++.
T Consensus 203 ---~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 203 ---GIYSLPSVDGGTLYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp ----ECECEECCCTEEEEEETTTEEEEEETTTTEE
T ss_pred ---CccCCceeeCCEEEEEeCCCEEEEEECCCCCE
Confidence 2233 444666777777999999999998863
No 264
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=7.4e-09 Score=97.41 Aligned_cols=208 Identities=13% Similarity=0.009 Sum_probs=125.5
Q ss_pred ccccceeEEEe-cCC-eEEEEec-CC--eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCC--eEEEEECC
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVG-DK--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGT--RICIWRRN 180 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~--~i~~w~~~ 180 (422)
.+...+.+..| +|| .|+..+. ++ .|.+||+.+++..............+|+|||+.|+ ...++ .|.++|++
T Consensus 215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~ 294 (448)
T PRK04792 215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIA 294 (448)
T ss_pred cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECC
Confidence 34455667788 577 6665543 33 58889998876543322232334589999999887 44455 47778888
Q ss_pred CCceeeecCCCceeeeEEEeeeCCeEEEecC-CC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC-CC-
Q 014590 181 GLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-DG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-LG- 254 (422)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-dg- 254 (422)
+++...............+++++..++..+. ++ .|.++|+.+++..... .........+|+|+ +.++..+. ++
T Consensus 295 tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt-~~g~~~~~~~~SpDG~~l~~~~~~~g~ 373 (448)
T PRK04792 295 TKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLT-FEGEQNLGGSITPDGRSMIMVNRTNGK 373 (448)
T ss_pred CCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEe-cCCCCCcCeeECCCCCEEEEEEecCCc
Confidence 7764322222223334567778877655443 33 5667788777644322 12222345688887 56655543 34
Q ss_pred -cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCC-C--eEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 255 -SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTA-G--YASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 255 -~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d-g--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
.|.++|+.+++.. .......|+|+|+.++..+.+ + .+++++. ++.....+..+.+.+...+ |+|
T Consensus 374 ~~I~~~dl~~g~~~~lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~-Wsp 446 (448)
T PRK04792 374 FNIARQDLETGAMQVLTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPA-WSP 446 (448)
T ss_pred eEEEEEECCCCCeEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCc-cCC
Confidence 4566788776543 122345799999988776643 3 3777786 4666666666656666666 665
No 265
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.18 E-value=2.2e-09 Score=90.96 Aligned_cols=242 Identities=15% Similarity=0.176 Sum_probs=156.7
Q ss_pred ceeeEEEecCCCeEE-EecCCeEEEEECCCCce-------eeecCCCce-----------eeeEEEeeeCCe--EEEecC
Q 014590 153 AASLVDFDFDESKIV-GLIGTRICIWRRNGLRS-------VFPSREGTF-----------MKGLCMRYFDPE--AVVGCE 211 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~-------~~~~~~~~~-----------~~~~~~~~~~~~--l~~~~~ 211 (422)
-+..+.|...|.+|+ |..+|.|-++.-+.... .++.|.... +..+.+...++. ++....
T Consensus 27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstN 106 (433)
T KOG1354|consen 27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTN 106 (433)
T ss_pred ceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecC
Confidence 345689999999999 88899999986543221 233333222 223334433333 777788
Q ss_pred CCeEEEEeCCCcceee-----------------------------------ee-ecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 212 DGTARVFDMYSRKCSQ-----------------------------------II-RMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 212 d~~i~iwd~~~~~~~~-----------------------------------~~-~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
|.+|++|.+....... .+ .+|+--|+++.++.| ..+++ ..|=
T Consensus 107 dktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS-ADdL 185 (433)
T KOG1354|consen 107 DKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS-ADDL 185 (433)
T ss_pred CcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee-ccce
Confidence 9999999875322111 01 256777899999877 45554 5678
Q ss_pred cEEEEeCCCCccc---------------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCee------eeee-------
Q 014590 255 SIAISGLSSDQRL---------------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKS------LWET------- 305 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~------~~~~------- 305 (422)
.|.+|++.-.... .-|++..|+|.. +.++-.+..|+|++-|++...+ +.+.
T Consensus 186 RINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~r 265 (433)
T KOG1354|consen 186 RINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSR 265 (433)
T ss_pred eeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcch
Confidence 8999998643322 678888999965 5667777899999999984211 1111
Q ss_pred ---ccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC-CCCceEEEeeecCCccc-ccCCCCCCeEEeeeccccCCCccc
Q 014590 306 ---RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ-NTGEVLSRCVMDIGSAS-SSSNKVSGVIERNEGRRLSAGCCI 380 (422)
Q Consensus 306 ---~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~-~~~~~~~~~~~~~~~~~-~~~~s~d~~i~~~~~~~~~~~~~~ 380 (422)
..--..|..+. |+++|+++++-.. -+|++||+ ...+++.+++.|..... +.+.-++-.|
T Consensus 266 sffseiIsSISDvK-Fs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~I-------------- 329 (433)
T KOG1354|consen 266 SFFSEIISSISDVK-FSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAI-------------- 329 (433)
T ss_pred hhHHHHhhhhhceE-EccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccch--------------
Confidence 11114577888 9999999987643 57999999 56788888887755210 0000000001
Q ss_pred ccCCCCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccCCC
Q 014590 381 DRIPKTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 381 ~~~~~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
-.-..++|+ +.+++|||.....++++...+.
T Consensus 330 --------fdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 330 --------FDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred --------hheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 012346674 5699999999999999976654
No 266
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.17 E-value=8.4e-09 Score=85.67 Aligned_cols=228 Identities=17% Similarity=0.127 Sum_probs=146.6
Q ss_pred cceeEEEe----cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCC------Cc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 113 VGVDQCRM----KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLP------NA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 113 ~~v~~v~~----~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
..+..+.| .+| .++-+..+|.|.++.....+....+.+- .. ...+.|++.+..++ +..+|.+.+-+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~ 149 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY 149 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence 34555555 244 6677788899999987655544444431 11 23467788888887 77778888555
Q ss_pred CCCCc-eeeecCCCce--eeeEEEeeeCCe-EEEecCCCeEEEEeCC-Ccceeee-eecCCccEEEEEecCC--CEEEEE
Q 014590 179 RNGLR-SVFPSREGTF--MKGLCMRYFDPE-AVVGCEDGTARVFDMY-SRKCSQI-IRMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 179 ~~~~~-~~~~~~~~~~--~~~~~~~~~~~~-l~~~~~d~~i~iwd~~-~~~~~~~-~~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
..... ...+.-+.|. .....+....|. +++|+.|+.+..||++ .++.+.. .+.|...|.++.-+|. .++++|
T Consensus 150 ~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TG 229 (339)
T KOG0280|consen 150 ETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATG 229 (339)
T ss_pred cceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEe
Confidence 43332 1111222222 233334444444 8999999999999998 4444443 5678899999998854 799999
Q ss_pred cCCCcEEEEeCCC-Cccc------cceEeEEEecCC--CEEEEEeCCCeEEEEECCCC--e---eeeeeccCCCceeeee
Q 014590 251 SSLGSIAISGLSS-DQRL------TGIKTLCYNPCS--RLVFAGTTAGYASCWDLRTM--K---SLWETRISPNVVYSLQ 316 (422)
Q Consensus 251 ~~dg~i~iwd~~~-~~~~------~~v~~~~~~~~~--~~l~~g~~dg~i~iwd~~~~--~---~~~~~~~~~~~v~~l~ 316 (422)
+.|..|++||.++ ++.+ +.|..+..+|.- ..++++-.+| .+|-+...+ + .....+.|.+-++.-.
T Consensus 230 sYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~D 308 (339)
T KOG0280|consen 230 SYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGD 308 (339)
T ss_pred ccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccc
Confidence 9999999999995 4444 889999999853 3455555565 667666543 2 3344556766666666
Q ss_pred eEecCCCEEEEEe-cCCeEE-EEECCCC
Q 014590 317 HLQNDTSTLVVGG-IDGVLR-VLDQNTG 342 (422)
Q Consensus 317 ~~s~~~~~l~s~~-~dg~v~-vwd~~~~ 342 (422)
|......|+|++ .|+.++ +|-.-++
T Consensus 309 -Wd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 309 -WDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred -cccccceeeeeeccccceeeeeeeccC
Confidence 433345688865 466644 6654444
No 267
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.15 E-value=6.7e-07 Score=77.01 Aligned_cols=254 Identities=9% Similarity=0.119 Sum_probs=163.2
Q ss_pred CCeEEEEEcCCC----eEEEeeeCCCceeeEEEecCCCeEE-Ee---cCCeEEEEECCC--Cceee---ecCCCceeeeE
Q 014590 131 DKVMRLWSLEGY----KCVEEYSLPNAASLVDFDFDESKIV-GL---IGTRICIWRRNG--LRSVF---PSREGTFMKGL 197 (422)
Q Consensus 131 dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~i~~w~~~~--~~~~~---~~~~~~~~~~~ 197 (422)
++-|.+|++.+. ..+...........++++++++.|. +. .+|.|..|.++. ++..+ ....+....-+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 567999998742 3344445556778899999999887 32 257788877765 44322 22334443567
Q ss_pred EEeeeCCeEEEec-CCCeEEEEeCCC-cceee--eeecCCcc----------EEEEEecCC-CEEEEEc-CCCcEEEEeC
Q 014590 198 CMRYFDPEAVVGC-EDGTARVFDMYS-RKCSQ--IIRMHCAP----------VTSLSLSED-QLIISGS-SLGSIAISGL 261 (422)
Q Consensus 198 ~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~--~~~~~~~~----------v~~l~~~~~-~~l~s~~-~dg~i~iwd~ 261 (422)
++...+..++++. ..|.|.++-++. |.+.. ....|.+. +....+.|+ +++++.. ..-.|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 7777777766654 468999998865 43221 12235444 777888888 5666664 2347899999
Q ss_pred CCCccc----------cceEeEEEecCCCEEEEEeC-CCeEEEEECCCC-eeeeeecc---------CCCceeeeeeEec
Q 014590 262 SSDQRL----------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTM-KSLWETRI---------SPNVVYSLQHLQN 320 (422)
Q Consensus 262 ~~~~~~----------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~-~~~~~~~~---------~~~~v~~l~~~s~ 320 (422)
..|... ...+.|.|+|++++..+.++ +++|.+|..... ..+.+++. .......|. +++
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIh-is~ 253 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIH-ISP 253 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEE-ECC
Confidence 987765 78899999999999888775 889999988763 22222221 124566777 899
Q ss_pred CCCEEEEEec-CCeEEEEECCCC-ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--
Q 014590 321 DTSTLVVGGI-DGVLRVLDQNTG-EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-- 396 (422)
Q Consensus 321 ~~~~l~s~~~-dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-- 396 (422)
||++|.++.. ...|-+|.+... ..+........ +...-....+
T Consensus 254 dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~t---------------------------------eg~~PR~F~i~~ 300 (346)
T COG2706 254 DGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPT---------------------------------EGQFPRDFNINP 300 (346)
T ss_pred CCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEecc---------------------------------CCcCCccceeCC
Confidence 9999988753 346777766532 22222221111 1122344445
Q ss_pred cCEEEEEEeCCC-eEEEEEccCC
Q 014590 397 GMKKVVTTHNSK-YIRLWKFNYS 418 (422)
Q Consensus 397 ~~~~l~s~s~Dg-~i~iW~~~~~ 418 (422)
++++|+.+++|+ .|.++..+..
T Consensus 301 ~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 301 SGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred CCCEEEEEccCCCcEEEEEEcCC
Confidence 578888887654 6888877643
No 268
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.14 E-value=1.3e-08 Score=94.38 Aligned_cols=241 Identities=12% Similarity=0.109 Sum_probs=162.6
Q ss_pred ccceeEEEec--CCeEEEEecCCeEEEEEcCCCeE---------------EEeeeCCC-ceeeEEEecCCCeEE-EecCC
Q 014590 112 SVGVDQCRMK--RGLILTGVGDKVMRLWSLEGYKC---------------VEEYSLPN-AASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 112 ~~~v~~v~~~--~~~l~s~~~dg~v~iwd~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~ 172 (422)
.....|+.|. .|+++.|+.||.++|-.+.+... -+++.+|. .+.++.|+.+...|. +..+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 3456789994 55999999999999998765311 13455554 455688888888888 77889
Q ss_pred eEEEEECCCCc---eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE
Q 014590 173 RICIWRRNGLR---SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII 248 (422)
Q Consensus 173 ~i~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~ 248 (422)
-|.+|-+-.+. .........++..++|..++..++....||.|.+=.++ |..+.--.-...-...+.|++| ..++
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg~~l~hv~ws~D~~~~L 172 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKGQLLAHVLWSEDLEQAL 172 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcchheccceeecccHHHHH
Confidence 99999987765 23445556677788888888888888999988776654 3322211111122346889988 6777
Q ss_pred EEcCCCcEEEEeCCCCccc------------------cceEeEEEe--------cCCCEEEEEeCCCeEEEEECCCCeee
Q 014590 249 SGSSLGSIAISGLSSDQRL------------------TGIKTLCYN--------PCSRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~------------------~~v~~~~~~--------~~~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
.+-..|.+.++|.+..-.. ..|..+.|. |+...++++..+|.+.+..-.+....
T Consensus 173 f~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~P 252 (1189)
T KOG2041|consen 173 FKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEP 252 (1189)
T ss_pred hhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCC
Confidence 7788899999997643222 224445553 57788999999998887654433222
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecC---------CeEEEEECCCCceEEEeeecCCccc
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGID---------GVLRVLDQNTGEVLSRCVMDIGSAS 356 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~~~~~~~ 356 (422)
..+.. .-.+.... |+++|..|+.++.| +.|.+|..- |+.+.+++.....+.
T Consensus 253 vv~dt-gm~~vgak-Wnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~i~gtlkvpg~~It 312 (1189)
T KOG2041|consen 253 VVVDT-GMKIVGAK-WNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY-GHIVGTLKVPGSCIT 312 (1189)
T ss_pred eEEec-ccEeecce-ecCCCcEEEEccCcccccCccccceEEEeccc-hhheEEEecCCceee
Confidence 22222 25577888 99999999998864 256666543 666677666544333
No 269
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.14 E-value=1.8e-07 Score=96.39 Aligned_cols=238 Identities=15% Similarity=0.103 Sum_probs=148.6
Q ss_pred EEEecCCC-eEE-EecCCeEEEEECCCCceeeecCCC--------------ceeeeEEEeeeCCeEEE-ecCCCeEEEEe
Q 014590 157 VDFDFDES-KIV-GLIGTRICIWRRNGLRSVFPSREG--------------TFMKGLCMRYFDPEAVV-GCEDGTARVFD 219 (422)
Q Consensus 157 ~~~~~~~~-~l~-~~~~~~i~~w~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~-~~~d~~i~iwd 219 (422)
+++++++. .++ -+.++.|.++|..+.........+ .....+++...++.|++ -..++.|+.+|
T Consensus 573 vavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id 652 (1057)
T PLN02919 573 LAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREID 652 (1057)
T ss_pred EEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEe
Confidence 67777544 444 455688999998765432221111 01234556555665544 44557899999
Q ss_pred CCCcceeeeeecC-----------------CccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCccc-------------
Q 014590 220 MYSRKCSQIIRMH-----------------CAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRL------------- 267 (422)
Q Consensus 220 ~~~~~~~~~~~~~-----------------~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~------------- 267 (422)
..++. +.++.+- -..-..++++| + ..+++.+.++.|++||..++...
T Consensus 653 ~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g 731 (1057)
T PLN02919 653 FVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNG 731 (1057)
T ss_pred cCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCC
Confidence 87654 3333110 01235789987 4 56677778899999998765321
Q ss_pred --------cceEeEEEecCCCEEE-EEeCCCeEEEEECCCCeeeeee-------------ccC--------CCceeeeee
Q 014590 268 --------TGIKTLCYNPCSRLVF-AGTTAGYASCWDLRTMKSLWET-------------RIS--------PNVVYSLQH 317 (422)
Q Consensus 268 --------~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~-------------~~~--------~~~v~~l~~ 317 (422)
.....++++|+++.|+ +-+.++.|++||+.++...... ..+ -....+++
T Consensus 732 ~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gva- 810 (1057)
T PLN02919 732 SSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVL- 810 (1057)
T ss_pred CccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceee-
Confidence 3456799999998554 5556789999999875432110 000 01235777
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV- 396 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~- 396 (422)
++++|..+++-+.++.|++||..++.... +.+... .+..||.. ..++-.....|++
T Consensus 811 vd~dG~LYVADs~N~rIrviD~~tg~v~t-iaG~G~-----~G~~dG~~-----------------~~a~l~~P~GIavd 867 (1057)
T PLN02919 811 CAKDGQIYVADSYNHKIKKLDPATKRVTT-LAGTGK-----AGFKDGKA-----------------LKAQLSEPAGLALG 867 (1057)
T ss_pred EeCCCcEEEEECCCCEEEEEECCCCeEEE-EeccCC-----cCCCCCcc-----------------cccccCCceEEEEe
Confidence 89999988888999999999998776543 322111 12222211 0111234567777
Q ss_pred -cCEEEEEEeCCCeEEEEEccCCC
Q 014590 397 -GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 397 -~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
+|+.+++-+.+++|++||+.+++
T Consensus 868 ~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 868 ENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CCCCEEEEECCCCEEEEEECCCCc
Confidence 58889999999999999998764
No 270
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.13 E-value=2e-09 Score=87.75 Aligned_cols=269 Identities=17% Similarity=0.236 Sum_probs=154.4
Q ss_pred eeEEeecccc-ceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCC
Q 014590 104 DIDQWKAHSV-GVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG 181 (422)
Q Consensus 104 ~~~~l~~H~~-~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~ 181 (422)
.+-+..+|.+ .|+.+.+.+. .|+++..++.+......++.+....+...++ +
T Consensus 27 ~vD~i~~~~d~~~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i--------------------------~ 80 (319)
T KOG4714|consen 27 LVDEIMQHADVKLSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGI--------------------------D 80 (319)
T ss_pred chhhcccccceEEEEeechhhheeecccchhheeeeccceEEEechhhcccCc--------------------------C
Confidence 4444555555 2555666555 8888888888877766555544333221111 0
Q ss_pred CceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee-eeee-cCCccEEEEEe-cCCCEEEEEc-----CC
Q 014590 182 LRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-QIIR-MHCAPVTSLSL-SEDQLIISGS-----SL 253 (422)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~-~~~~~v~~l~~-~~~~~l~s~~-----~d 253 (422)
....+. ..............+..++++..||.+.+.+.+.-..+ ..+. .|.+.. +.+. +..+.+.++. .-
T Consensus 81 ~~~~~a-~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~a-s~~~~~~~~~i~s~~~g~~n~~ 158 (319)
T KOG4714|consen 81 PFKVLA-KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSA-SRKICRHGNSILSGGCGNWNAQ 158 (319)
T ss_pred ceeeee-ccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhccccccccc-ccceeecccEEecCCcceEeec
Confidence 001111 11111112233334455899999999999987542111 1111 111111 1111 1223333332 12
Q ss_pred CcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCe-eeeeeccCCCceeeeeeEec-CCC
Q 014590 254 GSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMK-SLWETRISPNVVYSLQHLQN-DTS 323 (422)
Q Consensus 254 g~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~s~-~~~ 323 (422)
+..+.|+++..+.. ..|.+++-+|.. ..+++|+.||.+.+||.++.. +...+..|+.+++.+- |+| ++.
T Consensus 159 d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~-FHpk~p~ 237 (319)
T KOG4714|consen 159 DNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVH-FHPKNPE 237 (319)
T ss_pred cceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhhee-ccCCCch
Confidence 34566776544433 668899988865 567788899999999999763 4456788999999999 666 456
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCc-ccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGS-ASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVV 402 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~ 402 (422)
.|+++++||.+-.||..+ +.+. +...... ..-+++.+-.. ...+..+...-.-.|++++..|..|+
T Consensus 238 ~Lft~sedGslw~wdas~-~~l~-i~~~~s~~s~WLsgD~v~s-----------~i~i~~ll~~~~~SinsfDV~g~~lV 304 (319)
T KOG4714|consen 238 HLFTCSEDGSLWHWDAST-TFLS-ISNQASVISSWLSGDPVKS-----------RIEITSLLPSRSLSINSFDVLGPCLV 304 (319)
T ss_pred heeEecCCCcEEEEcCCC-ceEE-ecCccccccccccCCcccc-----------eEeeeccccccceeeeeeeccCceEE
Confidence 899999999999999764 4433 1111110 01112222111 11223333334456788888899999
Q ss_pred EEeCCCeEEEEE
Q 014590 403 TTHNSKYIRLWK 414 (422)
Q Consensus 403 s~s~Dg~i~iW~ 414 (422)
+|+.-+.|.+.+
T Consensus 305 cgtd~eaIyl~~ 316 (319)
T KOG4714|consen 305 CGTDAEAIYLTR 316 (319)
T ss_pred eccccceEEEec
Confidence 999999998875
No 271
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.08 E-value=1e-07 Score=89.00 Aligned_cols=212 Identities=12% Similarity=0.023 Sum_probs=128.4
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCe--EE--EecC--CeEEEEECCCCcee-eecCCCceeeeEEEeeeCC
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK--IV--GLIG--TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDP 204 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~--~~~~--~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 204 (422)
..|.+.|.+.+..............-.|+|||+. ++ +..+ ..|.+.++.+++.. +....+.. ....+++++.
T Consensus 165 ~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~-~~p~wSPDG~ 243 (428)
T PRK01029 165 GELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQ-LMPTFSPRKK 243 (428)
T ss_pred ceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCc-cceEECCCCC
Confidence 3566777765544433333334455799999975 32 3333 46888899877633 22233322 3467888888
Q ss_pred eEEEecC-----CCeEEEEeCCCc---ceeeeeecCCccEEEEEecCC-CEEEEEc-CCCcEEEE--eCCC--Ccc--c-
Q 014590 205 EAVVGCE-----DGTARVFDMYSR---KCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGSIAIS--GLSS--DQR--L- 267 (422)
Q Consensus 205 ~l~~~~~-----d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg~i~iw--d~~~--~~~--~- 267 (422)
.|+..+. +-.+..|++..+ +.......+.+.....+|+|| +.++..+ .+|...+| ++.. +.. +
T Consensus 244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt 323 (428)
T PRK01029 244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT 323 (428)
T ss_pred EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec
Confidence 8665442 223445776653 333333333334467799988 5555554 46654454 4432 211 1
Q ss_pred ---cceEeEEEecCCCEEEEEeCC---CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec---CCeEEEEE
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTA---GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI---DGVLRVLD 338 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~---dg~v~vwd 338 (422)
..+....|+|||+.|+..+.+ ..|.+||+.+++.. .+......+.... |+|||+.|+..+. ...|+++|
T Consensus 324 ~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~-wSpDG~~L~f~~~~~g~~~L~~vd 401 (428)
T PRK01029 324 KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPS-WAIDSLHLVYSAGNSNESELYLIS 401 (428)
T ss_pred cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceE-ECCCCCEEEEEECCCCCceEEEEE
Confidence 456788999999998876543 46999999887654 3333334566777 9999998775433 35788889
Q ss_pred CCCCceEE
Q 014590 339 QNTGEVLS 346 (422)
Q Consensus 339 ~~~~~~~~ 346 (422)
+.+++...
T Consensus 402 l~~g~~~~ 409 (428)
T PRK01029 402 LITKKTRK 409 (428)
T ss_pred CCCCCEEE
Confidence 88776543
No 272
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.08 E-value=3.7e-07 Score=94.11 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=150.0
Q ss_pred EEEec--CC-eEEEEecCCeEEEEEcCCCeEEEeeeC-C--------------CceeeEEEecCCCeEE-Ee-cCCeEEE
Q 014590 117 QCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSL-P--------------NAASLVDFDFDESKIV-GL-IGTRICI 176 (422)
Q Consensus 117 ~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~l~-~~-~~~~i~~ 176 (422)
.++++ ++ ++++-+.++.|+++|... +.+..+.. . ....-+++.++++.|+ +. .++.|+.
T Consensus 572 gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~ 650 (1057)
T PLN02919 572 KLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE 650 (1057)
T ss_pred eEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence 45663 45 666777788999999864 44433332 1 1234588998888665 43 4577999
Q ss_pred EECCCCcee-eecC-------CC---------ceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeec-------
Q 014590 177 WRRNGLRSV-FPSR-------EG---------TFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRM------- 231 (422)
Q Consensus 177 w~~~~~~~~-~~~~-------~~---------~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~------- 231 (422)
+|..++... +... .+ .....+++.+.+.. +++.+.++.|++||..++... .+.+
T Consensus 651 id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~ 729 (1057)
T PLN02919 651 IDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNL 729 (1057)
T ss_pred EecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccC
Confidence 998776532 2110 00 01124566664444 666777889999998776532 2211
Q ss_pred --C------CccEEEEEecCC-C-EEEEEcCCCcEEEEeCCCCccc----------------------------cceEeE
Q 014590 232 --H------CAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSDQRL----------------------------TGIKTL 273 (422)
Q Consensus 232 --~------~~~v~~l~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~----------------------------~~v~~~ 273 (422)
+ -.....++++|+ + ++++-+.++.|++||+.++... .....+
T Consensus 730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv 809 (1057)
T PLN02919 730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV 809 (1057)
T ss_pred CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence 0 123456889886 4 5666677899999998765311 234688
Q ss_pred EEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-------------cCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 274 CYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR-------------ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 274 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------------~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+++++|+.+++-+.++.|++||..++....... +.-.....++ ++++|+.+++-+.++.|++||+.
T Consensus 810 avd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIa-vd~dG~lyVaDt~Nn~Irvid~~ 888 (1057)
T PLN02919 810 LCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLA-LGENGRLFVADTNNSLIRYLDLN 888 (1057)
T ss_pred eEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEE-EeCCCCEEEEECCCCEEEEEECC
Confidence 999999988888899999999998775542211 1112467788 99999999998999999999998
Q ss_pred CCce
Q 014590 341 TGEV 344 (422)
Q Consensus 341 ~~~~ 344 (422)
+++.
T Consensus 889 ~~~~ 892 (1057)
T PLN02919 889 KGEA 892 (1057)
T ss_pred CCcc
Confidence 8765
No 273
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.07 E-value=4e-07 Score=92.16 Aligned_cols=300 Identities=11% Similarity=0.037 Sum_probs=179.1
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEE----EcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCC--
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLW----SLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG-- 181 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iw----d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~-- 181 (422)
..+.|.++.+ .+. .++.+..+|.|.+. +..+.+.--.=....++.+++||||+..++ ++.++++.+.+.+=
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~ 153 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDP 153 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceE
Confidence 3467888887 555 78888888999999 655543332223345788999999999998 88888887754210
Q ss_pred ---------------------Cc--eeeecC-----------------------CCceeeeEEEeeeCCeEEEecC----
Q 014590 182 ---------------------LR--SVFPSR-----------------------EGTFMKGLCMRYFDPEAVVGCE---- 211 (422)
Q Consensus 182 ---------------------~~--~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~~~---- 211 (422)
|+ ..|.+. .+.....++|..++.++|+.+.
T Consensus 154 i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~ 233 (928)
T PF04762_consen 154 ISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPET 233 (928)
T ss_pred EEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCC
Confidence 00 001110 1112235667778888776654
Q ss_pred --CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC---CCcEEEEeCCCCccc-----------cceEeEE
Q 014590 212 --DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS---LGSIAISGLSSDQRL-----------TGIKTLC 274 (422)
Q Consensus 212 --d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~---dg~i~iwd~~~~~~~-----------~~v~~~~ 274 (422)
-+.++||+-+ |+...+.+.-.+--.+++|.|. +++++.-. ...|.+|.- +|-.- ..|..++
T Consensus 234 ~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~ 311 (928)
T PF04762_consen 234 GSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELA 311 (928)
T ss_pred CceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEE
Confidence 2689999964 7655544433333457889987 66666543 345666652 33221 6799999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCe--eeeeeccC-CCceeeeeeEecCCC-EEEEEecCCeEEEEECCCCceEEEeee
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMK--SLWETRIS-PNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~-~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
|++|+..||.-..|. |.+|-..+.. +.+++... ...+..+. |+|... .|...+.+|.+..++..-..... ..
T Consensus 312 Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~-Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s--~~ 387 (928)
T PF04762_consen 312 WNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVK-WDPEKPLRLHVLTSNGQYEIYDFAWDVSRS--PG 387 (928)
T ss_pred ECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceE-ECCCCCCEEEEEecCCcEEEEEEEEEEEec--CC
Confidence 999999999988766 9999888753 22233322 23344577 887644 57777777878776653110000 00
Q ss_pred cCCcccccCCCCCCe-EEe--eeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 351 DIGSASSSSNKVSGV-IER--NEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 351 ~~~~~~~~~~s~d~~-i~~--~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
....-....+--||. +.+ .....+|++.....+. -..+|.+++| ++..+++-..||.|.+|....+
T Consensus 388 ~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~--~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 388 SSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE--LPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred CCccCceEEEEEeCCeEEEecccccCCCchHhceEEc--CCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence 000001111112222 111 2222344443333332 2468999999 4555999999999999996553
No 274
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.06 E-value=1.6e-09 Score=109.49 Aligned_cols=181 Identities=13% Similarity=0.151 Sum_probs=137.8
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC 233 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 233 (422)
+.-+|...+.+ |+.||.+++|....+..+ +.......+....++..++.+..+..||.+.+|.+. .++....+.|.
T Consensus 2214 ~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchn 2292 (2439)
T KOG1064|consen 2214 MTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHN 2292 (2439)
T ss_pred ecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCC
Confidence 34444444444 999999999998887755 333333444455666677778888899999999985 66777778888
Q ss_pred ccEEEEEecCCCEEEEE---cCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee
Q 014590 234 APVTSLSLSEDQLIISG---SSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 234 ~~v~~l~~~~~~~l~s~---~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
.....+.|-. ..++++ +.++.+.+||..-.... +.++++++-|..+.+++|+.+|.|++||++..++.
T Consensus 2293 k~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~ 2371 (2439)
T KOG1064|consen 2293 KALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLR 2371 (2439)
T ss_pred ccccceeeee-hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHH
Confidence 8888888864 455554 35788999996432222 89999999999999999999999999999987777
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
++++. +. ...++++|+..|.++||++..-..+++++.
T Consensus 2372 h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2372 HTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred HHhhh----------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence 66654 22 456899999999999999988777777755
No 275
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.06 E-value=1.9e-09 Score=100.01 Aligned_cols=269 Identities=12% Similarity=0.081 Sum_probs=168.2
Q ss_pred eeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCce---eeecCCCceeeeEEEeeeC--Ce-EEEecCCCeEEEEeCC
Q 014590 148 YSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS---VFPSREGTFMKGLCMRYFD--PE-AVVGCEDGTARVFDMY 221 (422)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~-l~~~~~d~~i~iwd~~ 221 (422)
++.......+.++|.|+-++....-.+.+.|++..-. .+.-.....+....+++.. ++ +++.+.. .-.+|++.
T Consensus 21 l~v~~~~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~q-kaiiwnlA 99 (1081)
T KOG0309|consen 21 LKVDGGFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQ-KAIIWNLA 99 (1081)
T ss_pred EEecCcccceeeccccchhhhhhhcCeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcc-hhhhhhhh
Confidence 3344456668889999888844445566667665431 1222222223334444433 33 4444444 44588875
Q ss_pred C---cceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCC
Q 014590 222 S---RKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTA 288 (422)
Q Consensus 222 ~---~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~d 288 (422)
. ......+.+|...|+.+.|+|. ..+++++.|-.+..||+++.... .....+.|+-....+.+.+..
T Consensus 100 ~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg 179 (1081)
T KOG0309|consen 100 KSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHG 179 (1081)
T ss_pred cCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccC
Confidence 3 2344556789999999999975 68999999999999999987654 666778888655556666677
Q ss_pred CeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC-------------c
Q 014590 289 GYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG-------------S 354 (422)
Q Consensus 289 g~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~-------------~ 354 (422)
+.|.+||++.| .++..+++|...|++++|-..-...+.+.+.||+|+.||..............+ .
T Consensus 180 ~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g 259 (1081)
T KOG0309|consen 180 NDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEG 259 (1081)
T ss_pred CceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCce
Confidence 78999999964 677889999999999983334445789999999999999864432221111111 0
Q ss_pred ccccCCCCCCeEEeeec------cccCCCcccccCCCCCCCCeEEEEe------c------CEEEEEEeCCCeEEEEEcc
Q 014590 355 ASSSSNKVSGVIERNEG------RRLSAGCCIDRIPKTIRPPITCLAV------G------MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 355 ~~~~~~s~d~~i~~~~~------~~~~~~~~~~~~~~~h~~~v~~i~~------~------~~~l~s~s~Dg~i~iW~~~ 416 (422)
..++-.-.++.+-...- |...+.........+|...|...-| + .-.|+|-|.|..+++|.+.
T Consensus 260 ~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 260 YCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID 339 (1081)
T ss_pred eEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence 11111111111111000 1111111122234678887776666 1 2479999999999999986
Q ss_pred C
Q 014590 417 Y 417 (422)
Q Consensus 417 ~ 417 (422)
.
T Consensus 340 ~ 340 (1081)
T KOG0309|consen 340 S 340 (1081)
T ss_pred H
Confidence 4
No 276
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.06 E-value=9.1e-08 Score=78.66 Aligned_cols=186 Identities=9% Similarity=-0.023 Sum_probs=123.7
Q ss_pred eEE-EecCCeEEEEECCCCceeeec---CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEE
Q 014590 165 KIV-GLIGTRICIWRRNGLRSVFPS---REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (422)
Q Consensus 165 ~l~-~~~~~~i~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~ 240 (422)
.|+ ++..|.+.+|...+.+..... +...+.-....+-..-.+..++.|.++++.+++-+..........-.+.++.
T Consensus 86 ~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~ 165 (344)
T KOG4532|consen 86 TLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLH 165 (344)
T ss_pred EEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceeeeE
Confidence 444 667777777777765532222 1111111111111122277788899999988865443332221123378899
Q ss_pred ecCC-CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee-----ee
Q 014590 241 LSED-QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL-----WE 304 (422)
Q Consensus 241 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~-----~~ 304 (422)
++++ .+.++.+....|-.|.+...... ..-.+..|+.....+|+++.||++.|||++..... .+
T Consensus 166 ~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sst 245 (344)
T KOG4532|consen 166 YSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISST 245 (344)
T ss_pred EcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhccc
Confidence 9987 78888888899999988654432 45567888888899999999999999999964322 22
Q ss_pred eccCCCceeeeeeEecCCC--EEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 305 TRISPNVVYSLQHLQNDTS--TLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 305 ~~~~~~~v~~l~~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
-..|.+.+..+. |++.|. +|+-.-.-+.+.+-|+++++..+.+...
T Consensus 246 rp~hnGa~R~c~-Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~ 293 (344)
T KOG4532|consen 246 RPHHNGAFRVCR-FSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIP 293 (344)
T ss_pred CCCCCCceEEEE-ecCCCcceEEEEecCcceEEEEEcccCceeeEEecC
Confidence 345889999999 998765 4555555678999999998876665443
No 277
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.03 E-value=3.7e-09 Score=91.46 Aligned_cols=145 Identities=11% Similarity=0.123 Sum_probs=99.7
Q ss_pred EEecCC-CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCe---EEEEECCCCeeeee
Q 014590 239 LSLSED-QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGY---ASCWDLRTMKSLWE 304 (422)
Q Consensus 239 l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~---i~iwd~~~~~~~~~ 304 (422)
+..+|+ ++++.+..+....++++...... ...+++.+..+...+..+..-|. +.+|....+.+. .
T Consensus 68 ~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-~ 146 (390)
T KOG3914|consen 68 VLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCE-P 146 (390)
T ss_pred cccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcc-h
Confidence 334444 56666666666666665543321 33344444445555555544444 444544444333 4
Q ss_pred eccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCC
Q 014590 305 TRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIP 384 (422)
Q Consensus 305 ~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~ 384 (422)
+-+|-.-++.++ ++||+++|+++..|..|+|-....--.+..| .
T Consensus 147 ~lGhvSml~dVa-vS~D~~~IitaDRDEkIRvs~ypa~f~Iesf-----------------------------------c 190 (390)
T KOG3914|consen 147 ILGHVSMLLDVA-VSPDDQFIITADRDEKIRVSRYPATFVIESF-----------------------------------C 190 (390)
T ss_pred hhhhhhhhheee-ecCCCCEEEEecCCceEEEEecCcccchhhh-----------------------------------c
Confidence 568999999999 9999999999999999999776644333333 3
Q ss_pred CCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 385 KTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 385 ~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
-||+..|..++. ++..|+|||.|++|++||+.++..
T Consensus 191 lGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~ 227 (390)
T KOG3914|consen 191 LGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKL 227 (390)
T ss_pred cccHhheeeeeeccCceeeecCCCCcEEEEecccCCc
Confidence 578889999999 788899999999999999998754
No 278
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.01 E-value=4.8e-08 Score=90.69 Aligned_cols=232 Identities=11% Similarity=0.127 Sum_probs=164.7
Q ss_pred EEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeC---CCceeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 106 DQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSL---PNAASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
++|+||.+.|.-+.|.+. .|-|...+|.|.||-+-.|......-. ..-+.+++|..||..+. ...||.|.+=.+
T Consensus 65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv 144 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV 144 (1189)
T ss_pred hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence 579999999999999654 888899999999999888765433322 22345589999999998 999999999888
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-------ee----eeeecCCccEEEEEec------
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-------CS----QIIRMHCAPVTSLSLS------ 242 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~----~~~~~~~~~v~~l~~~------ 242 (422)
++.+.--....+.....+.++.+...++.+-.+|.++++|.+..- +. ..+......|..+.|.
T Consensus 145 dGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~ 224 (1189)
T KOG2041|consen 145 DGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQP 224 (1189)
T ss_pred ccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCcccc
Confidence 887644344444444456667777777778888999999975321 11 0111112234455553
Q ss_pred --CC-CEEEEEcCCCcEEEEeCCCCc-cc-----cceEeEEEecCCCEEEEEeCC---------CeEEEEECCCCeeeee
Q 014590 243 --ED-QLIISGSSLGSIAISGLSSDQ-RL-----TGIKTLCYNPCSRLVFAGTTA---------GYASCWDLRTMKSLWE 304 (422)
Q Consensus 243 --~~-~~l~s~~~dg~i~iwd~~~~~-~~-----~~v~~~~~~~~~~~l~~g~~d---------g~i~iwd~~~~~~~~~ 304 (422)
|+ ..++.+...|.+.+-.-.+.. .+ ..+....|+++|..|++++.+ +.|..|..- |+.+.+
T Consensus 225 v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~i~gt 303 (1189)
T KOG2041|consen 225 VPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY-GHIVGT 303 (1189)
T ss_pred CCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEeccc-hhheEE
Confidence 34 578888888888776544332 22 678888999999999998753 256666544 788888
Q ss_pred eccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 305 TRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 305 ~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++.....|++++ |...|-.++.+ .|+.|++=+++
T Consensus 304 lkvpg~~It~ls-WEg~gLriA~A-vdsfiyfanIR 337 (1189)
T KOG2041|consen 304 LKVPGSCITGLS-WEGTGLRIAIA-VDSFIYFANIR 337 (1189)
T ss_pred EecCCceeeeeE-EcCCceEEEEE-ecceEEEEeec
Confidence 888888999999 76666666655 57788877766
No 279
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=1.1e-08 Score=89.77 Aligned_cols=238 Identities=11% Similarity=0.061 Sum_probs=166.8
Q ss_pred cccceeEEEec-CCeEEEEecCCeEEEEEcCC--C-eEEEeeeCCCce-eeEEEecCCCeEE-Eec-CCeEEEEECCCCc
Q 014590 111 HSVGVDQCRMK-RGLILTGVGDKVMRLWSLEG--Y-KCVEEYSLPNAA-SLVDFDFDESKIV-GLI-GTRICIWRRNGLR 183 (422)
Q Consensus 111 H~~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~--~-~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~-~~~i~~w~~~~~~ 183 (422)
|.+.|+.+... ..++.+++.||.++.|.-.. | +.+..+..|... ..++.+.++..+. .+. |..++++|+++-.
T Consensus 8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~D 87 (558)
T KOG0882|consen 8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFD 87 (558)
T ss_pred ccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccc
Confidence 88888888774 55999999999999998643 1 334444445443 3478888888877 455 8999999988755
Q ss_pred eeeecCCCceeeeEEEeeeCC----eEE-EecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC-CEEEEEcCCCc
Q 014590 184 SVFPSREGTFMKGLCMRYFDP----EAV-VGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED-QLIISGSSLGS 255 (422)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~----~l~-~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~ 255 (422)
.+-...........+|..... .++ +.-.++.+.++|-.... ....-.-|..+|..+.+.+- ..+++....|.
T Consensus 88 minmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gm 167 (558)
T KOG0882|consen 88 MINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGM 167 (558)
T ss_pred hhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccce
Confidence 331111111111233333333 133 33457899999976443 23333568999999999975 78889888999
Q ss_pred EEEEeCCC------Cccc----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-------
Q 014590 256 IAISGLSS------DQRL----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR------- 306 (422)
Q Consensus 256 i~iwd~~~------~~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------- 306 (422)
|.-|.... .... ....++.|+|+|..+.+-+.|..|++++.++++.++.+.
T Consensus 168 VEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~ 247 (558)
T KOG0882|consen 168 VEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQ 247 (558)
T ss_pred eEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhh
Confidence 99999873 1111 778899999999999999999999999999886554322
Q ss_pred -------------------------cCCCce-eeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 307 -------------------------ISPNVV-YSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 307 -------------------------~~~~~v-~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.|...+ +.+ +|+..|++|+-|+-=| |+|.++.++++.+.+-.
T Consensus 248 ~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~-~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk 315 (558)
T KOG0882|consen 248 YQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNA-VFDESGNFLLYGTILG-IKVINLDTNTVVRILGK 315 (558)
T ss_pred hccccccccceeehhhhhhHHhhHhhhcCccccee-EEcCCCCEEEeeccee-EEEEEeecCeEEEEecc
Confidence 122112 233 3888999999988777 99999999998887744
No 280
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.99 E-value=2.8e-07 Score=76.92 Aligned_cols=193 Identities=17% Similarity=0.176 Sum_probs=128.2
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCc------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLR------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 230 (422)
++.+.+|+.|+.-.|..|.+=..+..- ........+.=.-++|++++..||.+...|+|+++|+.. ..+..+.
T Consensus 3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~ 81 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIP 81 (282)
T ss_pred eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcC
Confidence 345667777777777776665544321 112223333345677888888899999999999999864 4343432
Q ss_pred c-------CCccEEEEEecCC-------CEEEEEcCCCcEEEEeCCCCccc---------------cceEeEEEecCCCE
Q 014590 231 M-------HCAPVTSLSLSED-------QLIISGSSLGSIAISGLSSDQRL---------------TGIKTLCYNPCSRL 281 (422)
Q Consensus 231 ~-------~~~~v~~l~~~~~-------~~l~s~~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~~~~~ 281 (422)
. -...|..+.|.+. ..+++-..+|.++-|-+..+... ..|.++.++|..++
T Consensus 82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~L 161 (282)
T PF15492_consen 82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRL 161 (282)
T ss_pred cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCE
Confidence 2 1246677777631 25677778888888776433211 68999999999998
Q ss_pred EEEEeC----CC-------eEEEEECCCCeeeee-----------------------e------ccCCCceeeeeeEecC
Q 014590 282 VFAGTT----AG-------YASCWDLRTMKSLWE-----------------------T------RISPNVVYSLQHLQND 321 (422)
Q Consensus 282 l~~g~~----dg-------~i~iwd~~~~~~~~~-----------------------~------~~~~~~v~~l~~~s~~ 321 (422)
|++|+. ++ -+..|.+-++.+... + ......|..|. .|||
T Consensus 162 LlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmS-lSPd 240 (282)
T PF15492_consen 162 LLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMS-LSPD 240 (282)
T ss_pred EEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEE-ECCC
Confidence 888863 11 256675543321110 0 11246688888 9999
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
|+.||+...+|.|.+|++.+-+..+....+
T Consensus 241 g~~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 241 GSLLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred CCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence 999999999999999999988777766543
No 281
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ]. This relatively conserved structural motif is present in numerous proteins and serves as a link between a target protein and a ubiquitin-conjugating enzyme. The SCF complex (e.g., Skp1-Cullin-F-box) plays a similar role as an E3 ligase in the ubiquitin protein degradation pathway [, ]. Different F-box proteins as a part of SCF complex recruit particular substrates for ubiquitination through specific protein-protein interaction domains. Many mammalian F-box domains contain leucine-rich or WD-40 repeats (IPR001680 from INTERPRO). However, several F-box proteins either have other previously described domains such as Sec7 domain found in FBS protein or do not contain defined protein-protein interaction domains or motifs.; GO: 0005515 protein binding; PDB: 2E32_A 2E31_A 3V7D_B 1NEX_B 3MKS_D 3L2O_B.
Probab=98.98 E-value=4.1e-10 Score=69.86 Aligned_cols=47 Identities=28% Similarity=0.441 Sum_probs=40.6
Q ss_pred cccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHH
Q 014590 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYC 69 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 69 (422)
++.+||.|++.+||++|++.++.++++|||.|+.++.+...|+..++
T Consensus 2 ~~~~LP~~il~~Il~~l~~~~~~~l~~vsk~~~~~~~~~~~~~~~~r 48 (48)
T PF00646_consen 2 PLSDLPDEILQEILSYLDPKDLLRLSLVSKRWRSLVDSPRLWKKIIR 48 (48)
T ss_dssp HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH-
T ss_pred CHHHCCHHHHHHHHHHCcHHHHHHHHHHhhHHHHHHcCCCccHHHhC
Confidence 57889999999999999999999999999999999999999987763
No 282
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.97 E-value=1.2e-06 Score=83.53 Aligned_cols=268 Identities=14% Similarity=0.103 Sum_probs=160.5
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-----eeeEE--Ee-cC-CCeEEEecCCeEEEEECCCCceeeecCC
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-----ASLVD--FD-FD-ESKIVGLIGTRICIWRRNGLRSVFPSRE 190 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~~~--~~-~~-~~~l~~~~~~~i~~w~~~~~~~~~~~~~ 190 (422)
+.++.++.++.++.+.-.|..+|+.+..+..... ...+. .. .+ +..++++.++.|.-+|.++++.+.....
T Consensus 59 v~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 59 VVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred EECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 4577888888899999999999999887765432 00010 11 13 4445588899999999999987755443
Q ss_pred Ccee-----eeEEEeeeCCeEEEec---------CCCeEEEEeCCCcceeeeeecCCc--------------------cE
Q 014590 191 GTFM-----KGLCMRYFDPEAVVGC---------EDGTARVFDMYSRKCSQIIRMHCA--------------------PV 236 (422)
Q Consensus 191 ~~~~-----~~~~~~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~--------------------~v 236 (422)
.... ........+..++.++ .++.+..+|..+|+.+..++.... .+
T Consensus 139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 218 (488)
T cd00216 139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTS 218 (488)
T ss_pred CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCc
Confidence 2210 0011112234455554 367899999999998887754211 11
Q ss_pred -EEEEecC-CCEEEEEcCCC------------------cEEEEeCCCCccc-------cceE------eEEEe----cCC
Q 014590 237 -TSLSLSE-DQLIISGSSLG------------------SIAISGLSSDQRL-------TGIK------TLCYN----PCS 279 (422)
Q Consensus 237 -~~l~~~~-~~~l~s~~~dg------------------~i~iwd~~~~~~~-------~~v~------~~~~~----~~~ 279 (422)
...++.+ ++.++.++.++ .+.-+|..+|+.. .... ...+. -+|
T Consensus 219 w~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g 298 (488)
T cd00216 219 WASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDG 298 (488)
T ss_pred cCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCC
Confidence 1233333 36777787665 6889999999887 1000 00111 123
Q ss_pred C---EEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE------------------ecCCeEEEEE
Q 014590 280 R---LVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG------------------GIDGVLRVLD 338 (422)
Q Consensus 280 ~---~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~------------------~~dg~v~vwd 338 (422)
. .+++++.+|.+..+|.++|+.+.+..... ..++ .+| ..++.+ ..+|.+.-.|
T Consensus 299 ~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~-~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD 372 (488)
T cd00216 299 KPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMA-YDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALD 372 (488)
T ss_pred CeeEEEEEECCCceEEEEECCCCcEeeEeEeec---cccc-cCC--ceEEEccccccccCcccccCCCCCCCceEEEEEe
Confidence 2 67888899999999999999998764321 1122 333 223332 2467888889
Q ss_pred CCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccCC
Q 014590 339 QNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+.+|+.+.+......... +. . ... ..-..+...+..|+.++.||.|..+|.+++
T Consensus 373 ~~tG~~~W~~~~~~~~~~---------------~~---------~-g~~-~~~~~~~~~g~~v~~g~~dG~l~ald~~tG 426 (488)
T cd00216 373 PKTGKVVWEKREGTIRDS---------------WN---------I-GFP-HWGGSLATAGNLVFAGAADGYFRAFDATTG 426 (488)
T ss_pred CCCCcEeeEeeCCccccc---------------cc---------c-CCc-ccCcceEecCCeEEEECCCCeEEEEECCCC
Confidence 999988777654211000 00 0 000 001123345667777778888888887776
Q ss_pred C
Q 014590 419 D 419 (422)
Q Consensus 419 ~ 419 (422)
+
T Consensus 427 ~ 427 (488)
T cd00216 427 K 427 (488)
T ss_pred c
Confidence 5
No 283
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=1.8e-09 Score=97.07 Aligned_cols=144 Identities=18% Similarity=0.286 Sum_probs=110.8
Q ss_pred CCeEEEecCCCeEEEEeCCC-------cceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------
Q 014590 203 DPEAVVGCEDGTARVFDMYS-------RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------- 267 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------- 267 (422)
.+.+++++.|++|++|.++. ..+..+++.|..+|.++.|-.+ +++++ .||.|++||.--++.+
T Consensus 747 ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlWDPFigr~Laq~~dap 824 (1034)
T KOG4190|consen 747 ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLWDPFIGRLLAQMEDAP 824 (1034)
T ss_pred ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcceeecccccchhHhhhcCc
Confidence 34499999999999999753 2367788999999999999876 56654 5899999998777665
Q ss_pred -----cceEeEEEecCCCEEEEE-eCCCeEEEEECCCCeeeeeec-----cCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 268 -----TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRTMKSLWETR-----ISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
+.|.++. +-+...+.+| +...+|+++|.+.++-..+++ +..+.+.+++ ..+.|+.++.+-.+|.|.+
T Consensus 825 k~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ia-Va~~GN~lAa~LSnGci~~ 902 (1034)
T KOG4190|consen 825 KEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIA-VADKGNKLAAALSNGCIAI 902 (1034)
T ss_pred ccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEE-eccCcchhhHHhcCCcEEE
Confidence 3333332 1234455555 678899999999876655554 3346688888 8899999999999999999
Q ss_pred EECCCCceEEEeee
Q 014590 337 LDQNTGEVLSRCVM 350 (422)
Q Consensus 337 wd~~~~~~~~~~~~ 350 (422)
.|.++|+.+.....
T Consensus 903 LDaR~G~vINswrp 916 (1034)
T KOG4190|consen 903 LDARNGKVINSWRP 916 (1034)
T ss_pred EecCCCceeccCCc
Confidence 99999998876644
No 284
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.93 E-value=9.9e-06 Score=70.19 Aligned_cols=189 Identities=17% Similarity=0.149 Sum_probs=119.0
Q ss_pred EEEec-CCCeEEEe-cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec---
Q 014590 157 VDFDF-DESKIVGL-IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--- 231 (422)
Q Consensus 157 ~~~~~-~~~~l~~~-~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--- 231 (422)
..|.+ ++..+++. ..+.|..|+..++........+ ...+.+...+..++.+...+ +.++|..+++.......
T Consensus 5 p~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~ 81 (246)
T PF08450_consen 5 PVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDG 81 (246)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETT
T ss_pred eEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCC
Confidence 45666 33334433 4678888888887754433333 22344443345566666554 45559888865443332
Q ss_pred --CCccEEEEEecCC-CEEEEEcCC--------CcEEEEeCCCCccc------cceEeEEEecCCCEEE-EEeCCCeEEE
Q 014590 232 --HCAPVTSLSLSED-QLIISGSSL--------GSIAISGLSSDQRL------TGIKTLCYNPCSRLVF-AGTTAGYASC 293 (422)
Q Consensus 232 --~~~~v~~l~~~~~-~~l~s~~~d--------g~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~-~g~~dg~i~i 293 (422)
.....+.+++.|+ ++.++.... |.+..++.. ++.. ...+.++|+|+++.|+ +-+..+.|..
T Consensus 82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~ 160 (246)
T PF08450_consen 82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWR 160 (246)
T ss_dssp CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEE
T ss_pred CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEE
Confidence 3456789999987 544444332 457777776 4432 7788999999999776 5567888999
Q ss_pred EECCCC-e------eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 294 WDLRTM-K------SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 294 wd~~~~-~------~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
+++... . .+..+....+..-.++ ++.+|++.++....+.|.++|.. |+.+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~-vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p 223 (246)
T PF08450_consen 161 FDLDADGGELSNRRVFIDFPGGPGYPDGLA-VDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP 223 (246)
T ss_dssp EEEETTTCCEEEEEEEEE-SSSSCEEEEEE-EBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S
T ss_pred EeccccccceeeeeeEEEcCCCCcCCCcce-EcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC
Confidence 988632 1 1222232223477888 99999988887789999999987 9988887653
No 285
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.93 E-value=6.3e-08 Score=84.00 Aligned_cols=143 Identities=15% Similarity=0.166 Sum_probs=101.4
Q ss_pred eEEEEecCCeEEEEEcCC----CeEEEeeeCCCceeeEEEecCCCeE-EEe---cCCeEEEEECCCCcee-eecCCCcee
Q 014590 124 LILTGVGDKVMRLWSLEG----YKCVEEYSLPNAASLVDFDFDESKI-VGL---IGTRICIWRRNGLRSV-FPSREGTFM 194 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~l-~~~---~~~~i~~w~~~~~~~~-~~~~~~~~~ 194 (422)
++|.+..++...+++... -+++..+..+.....+.+..+.... ++. ....+.+|....+... ..+|.. ..
T Consensus 76 llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvS-ml 154 (390)
T KOG3914|consen 76 LVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHVS-ML 154 (390)
T ss_pred EEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhhh-hh
Confidence 788887777766776543 2455555566666666666655543 333 3455666665543322 222222 23
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
..+++++++..++++..|..|++-....--.+..+ -+|...|..++.-++..|++++.|+++++||+++|+.+
T Consensus 155 ~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 155 LDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred heeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCcc
Confidence 46778888888999999999999877655555554 57999999999999989999999999999999999987
No 286
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.92 E-value=5.7e-07 Score=81.47 Aligned_cols=228 Identities=10% Similarity=0.117 Sum_probs=141.1
Q ss_pred eEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCC--CeEE------EecCCeEEEEECCCCc--e
Q 014590 116 DQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE--SKIV------GLIGTRICIWRRNGLR--S 184 (422)
Q Consensus 116 ~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~------~~~~~~i~~w~~~~~~--~ 184 (422)
++..|+ |+.++.=-..+.+.+|++.+-+.+..--+...+..+.++|.+ ..++ .+.-+.+++|...... .
T Consensus 129 W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~ 208 (566)
T KOG2315|consen 129 WVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQ 208 (566)
T ss_pred cccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccc
Confidence 577774 443333333468999998774433322223455667777753 3343 2334679999765211 1
Q ss_pred ee--ecCCCceeeeEEEeeeCCe-E--EEec---------CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CE--E
Q 014590 185 VF--PSREGTFMKGLCMRYFDPE-A--VVGC---------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL--I 247 (422)
Q Consensus 185 ~~--~~~~~~~~~~~~~~~~~~~-l--~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~--l 247 (422)
.. ...-....-.+.|..-+.- | ++.. ...++++.+++...+.-.+. -.++|.++.|+|+ .. +
T Consensus 209 ~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~V 287 (566)
T KOG2315|consen 209 PVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAV 287 (566)
T ss_pred hhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEE
Confidence 10 0000000012222222222 2 2222 23478888887333333333 4789999999986 33 3
Q ss_pred EEEcCCCcEEEEeCCCCccc----cceEeEEEecCCCEEEEEeC---CCeEEEEECCCCeeeeeeccCCCceeeeeeEec
Q 014590 248 ISGSSLGSIAISGLSSDQRL----TGIKTLCYNPCSRLVFAGTT---AGYASCWDLRTMKSLWETRISPNVVYSLQHLQN 320 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~----~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~ 320 (422)
+-|-.-..+.+||++-.-.. ++=+++-|+|.|++++.++- .|.+.+||..+.+++.++..... +-.. |+|
T Consensus 288 vyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~e-W~P 364 (566)
T KOG2315|consen 288 VYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFE-WSP 364 (566)
T ss_pred EEecccceEEEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCc--eEEE-EcC
Confidence 44556778999998643332 77888999999999988774 57899999999999888876543 3345 999
Q ss_pred CCCEEEEEec------CCeEEEEECCCCceEEEe
Q 014590 321 DTSTLVVGGI------DGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 321 ~~~~l~s~~~------dg~v~vwd~~~~~~~~~~ 348 (422)
||++++|++. |+.++||+.. |..+...
T Consensus 365 dGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~ 397 (566)
T KOG2315|consen 365 DGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEK 397 (566)
T ss_pred CCcEEEEEeccccEEecCCeEEEEec-Cceeehh
Confidence 9999999874 6789999975 6655443
No 287
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.92 E-value=5.4e-07 Score=84.27 Aligned_cols=213 Identities=11% Similarity=-0.031 Sum_probs=125.5
Q ss_pred EEeeccccceeEEEe-cCC-e--E-EEEecCC--eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec-CC--e-
Q 014590 106 DQWKAHSVGVDQCRM-KRG-L--I-LTGVGDK--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI-GT--R- 173 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~--l-~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~--~- 173 (422)
+.|..+...+.+-.| ||| . + ++...+| .|.+.++.+++..............+|+|||+.|+ .+. +| .
T Consensus 178 ~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di 257 (428)
T PRK01029 178 RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDL 257 (428)
T ss_pred eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcce
Confidence 334444445555677 565 3 2 2444443 57777888776544433333445589999999998 332 23 3
Q ss_pred -EEEEECCCC---c--eeeecCCCceeeeEEEeeeCCeEEEec-CCCeEEEE--eCCC-cceeeeeecCCccEEEEEecC
Q 014590 174 -ICIWRRNGL---R--SVFPSREGTFMKGLCMRYFDPEAVVGC-EDGTARVF--DMYS-RKCSQIIRMHCAPVTSLSLSE 243 (422)
Q Consensus 174 -i~~w~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iw--d~~~-~~~~~~~~~~~~~v~~l~~~~ 243 (422)
+..|++.++ . .+..... ......++++++..|+..+ .+|...+| ++.. +.....+..+...+....|+|
T Consensus 258 ~~~~~~~~~g~~g~~~~lt~~~~-~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSP 336 (428)
T PRK01029 258 FIQSFSLETGAIGKPRRLLNEAF-GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSP 336 (428)
T ss_pred eEEEeecccCCCCcceEeecCCC-CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECC
Confidence 344676542 2 1222111 1223457888888766554 45655555 4432 233344444455667889998
Q ss_pred C-CEEEEEcCC---CcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeC---CCeEEEEECCCCeeeeeeccCCC
Q 014590 244 D-QLIISGSSL---GSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTT---AGYASCWDLRTMKSLWETRISPN 310 (422)
Q Consensus 244 ~-~~l~s~~~d---g~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~~~~ 310 (422)
+ +.++..+.+ ..|.+||+.+++.. ..+....|+|||+.|+.... ...|+++|+.+++..... ...+
T Consensus 337 DG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt-~~~g 415 (428)
T PRK01029 337 DGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV-IGSG 415 (428)
T ss_pred CCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCC
Confidence 7 666655432 46999999887654 35677899999998875443 356888998876544332 2334
Q ss_pred ceeeeeeEecC
Q 014590 311 VVYSLQHLQND 321 (422)
Q Consensus 311 ~v~~l~~~s~~ 321 (422)
.+...+ |+|-
T Consensus 416 ~~~~p~-Ws~~ 425 (428)
T PRK01029 416 EKRFPS-WGAF 425 (428)
T ss_pred cccCce-ecCC
Confidence 455555 6654
No 288
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.92 E-value=4.2e-09 Score=89.36 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=108.0
Q ss_pred EEEEEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCC-----eeeeeeccCCCceeee
Q 014590 246 LIISGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-----KSLWETRISPNVVYSL 315 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~l 315 (422)
+-++.+.+..+-+-|+.+|-.. +.|.++.|...++++..|+.+|.|..+|++.. .+...+ -|...|+++
T Consensus 226 yhfs~G~sqqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtsl 304 (425)
T KOG2695|consen 226 YHFSVGLSQQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSL 304 (425)
T ss_pred eeecccccceeEEEEeecccccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhh
Confidence 3366677888899999887665 88999999998999999999999999999964 333333 478899999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECCCCce---EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeE
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQNTGEV---LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPIT 392 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~~~~~---~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~ 392 (422)
.....++++|++.+.+|+|++||.+.-++ +.++.+|.+.. ..--.
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~--------------------------------a~l~~ 352 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS--------------------------------AYLPA 352 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccc--------------------------------ccccc
Confidence 85555888999999999999999987666 88888876621 11111
Q ss_pred EEEecCEEEEEEeCCCeEEEEEccCC
Q 014590 393 CLAVGMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 393 ~i~~~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.|.-....++++|+|...|||.++.+
T Consensus 353 ~v~~eeg~I~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 353 HVKEEEGSIFSVGDDCYTRIWSLDSG 378 (425)
T ss_pred ccccccceEEEccCeeEEEEEecccC
Confidence 12223567888999999999998854
No 289
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.91 E-value=1.6e-06 Score=77.10 Aligned_cols=186 Identities=11% Similarity=0.078 Sum_probs=133.3
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCcee-eecC--------CCceeeeEE----Eee-eCCeEEEecCCCeEEEEeCCC
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLRSV-FPSR--------EGTFMKGLC----MRY-FDPEAVVGCEDGTARVFDMYS 222 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-~~~~--------~~~~~~~~~----~~~-~~~~l~~~~~d~~i~iwd~~~ 222 (422)
-..+.||+.++-+..|.|.+||.++.... +... ......... ++. .++.++..| .|...+.+...
T Consensus 272 R~~nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~ 350 (668)
T COG4946 272 RNANSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWD 350 (668)
T ss_pred cccCCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCC
Confidence 44567999999999999999998876521 1110 011110000 111 233344444 45666666554
Q ss_pred cceeeeeecCCccEEEEEecCC-CEEEEEcCCC-cEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 223 RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG-SIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg-~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
+-.++. +|.+.|.-..+.-+ +-++.|..|| .+-++|..+++.. +.|.++..+|+|++++++.....|.++
T Consensus 351 ~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vi 428 (668)
T COG4946 351 GYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVI 428 (668)
T ss_pred CeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEE
Confidence 444432 46667877777633 6788899998 8999999988744 899999999999999999999999999
Q ss_pred ECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCC----eEEEEECCCCceEE
Q 014590 295 DLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG----VLRVLDQNTGEVLS 346 (422)
Q Consensus 295 d~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg----~v~vwd~~~~~~~~ 346 (422)
|+.+++....-+...+-|+... |+|+++++|-+--+| .|+++|+..++...
T Consensus 429 didngnv~~idkS~~~lItdf~-~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~ 483 (668)
T COG4946 429 DIDNGNVRLIDKSEYGLITDFD-WHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD 483 (668)
T ss_pred EecCCCeeEecccccceeEEEE-EcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence 9999987655555668899999 999999999877665 68999998776543
No 290
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.89 E-value=4.4e-08 Score=82.11 Aligned_cols=228 Identities=11% Similarity=0.221 Sum_probs=145.1
Q ss_pred cccceeEEEec-CC-eEEEEecCCeEEEEEcCCCe-----EEEeeeCCC-------------ceeeEEEecCC---CeEE
Q 014590 111 HSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYK-----CVEEYSLPN-------------AASLVDFDFDE---SKIV 167 (422)
Q Consensus 111 H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~-------------~~~~~~~~~~~---~~l~ 167 (422)
..+.|++|.|. .| ||++|...|.|.++.-+... ....|+.|+ .+..+.|..++ ..|+
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 35679999994 45 99999999999999765422 223344432 23334554433 2355
Q ss_pred EecCCeEEEEECCCCc-------------------------ee-eecC----------------CCceeeeEEEeeeCCe
Q 014590 168 GLIGTRICIWRRNGLR-------------------------SV-FPSR----------------EGTFMKGLCMRYFDPE 205 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~-------------------------~~-~~~~----------------~~~~~~~~~~~~~~~~ 205 (422)
.+.|.+|++|.+.... .+ +... ..|...+-.++..+..
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 9999999999864320 00 0000 1111112222222221
Q ss_pred -EEEecCCCeEEEEeCCCcc---eeeeeecC-----CccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------
Q 014590 206 -AVVGCEDGTARVFDMYSRK---CSQIIRMH-----CAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL------- 267 (422)
Q Consensus 206 -l~~~~~d~~i~iwd~~~~~---~~~~~~~~-----~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~------- 267 (422)
.+..+.|=.|.+|+++-.. .+--++.| +.-|++..|+|. +.+.-.+..|.|++-|++....-
T Consensus 185 et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 185 ETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred heeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 3334556788899876332 11122333 345788899985 67777888999999999843321
Q ss_pred ----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC-CeeeeeeccCC------------Cce---eee
Q 014590 268 ----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT-MKSLWETRISP------------NVV---YSL 315 (422)
Q Consensus 268 ----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~------------~~v---~~l 315 (422)
..|..+.|+++|+++++-+.- +|++||.+. ..++.+...|. ..| ..+
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFei 343 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEI 343 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEE
Confidence 778899999999999988754 699999985 45666665443 122 345
Q ss_pred eeEecCCCEEEEEecCCeEEEEECC
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
. ||.|.+.+++|+..+..-+|-..
T Consensus 344 s-fSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 344 S-FSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred E-ecCCcccccccccccceeeeccc
Confidence 5 88888999999988888888643
No 291
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.88 E-value=2.6e-05 Score=64.41 Aligned_cols=285 Identities=10% Similarity=0.062 Sum_probs=162.1
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCC-CceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSRE-GTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~-~~~~~~~~~~~ 201 (422)
+++.||..+.+.--|..+|....+-........-++- -|+.++ ++..|.+++.+.+++...+.... +.+.....+.+
T Consensus 25 ~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~ 103 (354)
T KOG4649|consen 25 LVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDF 103 (354)
T ss_pred EEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcC
Confidence 8889999999999999999888776555444443333 455566 99999999999999975533322 22222334556
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEe
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKT 272 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~ 272 (422)
++..+..|+.|++.+..|..+..++...+...+...+=++.|+ ..+..+...|.+.--........ .++.+
T Consensus 104 ~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~ 183 (354)
T KOG4649|consen 104 DGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFA 183 (354)
T ss_pred CCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCCcccc
Confidence 6777999999999999999999888887654443344445553 55555556666555444443211 22222
Q ss_pred --EEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEe-cCCCEEEEEecCC--------eEEEEECCC
Q 014590 273 --LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ-NDTSTLVVGGIDG--------VLRVLDQNT 341 (422)
Q Consensus 273 --~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s-~~~~~l~s~~~dg--------~v~vwd~~~ 341 (422)
++ -+..+..+.-||.+.-+| ..|+.++++.. .++|..--+.+ |..+.|..+..+. .-.+|..++
T Consensus 184 splc---v~~sv~i~~VdG~l~~f~-~sG~qvwr~~t-~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~ 258 (354)
T KOG4649|consen 184 SPLC---VGSSVIITTVDGVLTSFD-ESGRQVWRPAT-KGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQS 258 (354)
T ss_pred Ccee---ccceEEEEEeccEEEEEc-CCCcEEEeecC-CCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecC
Confidence 11 133455556667666666 44555554332 23332111111 2223333333322 234677777
Q ss_pred CceEEEee-------ecCCc----ccccCCCCCCeEEeeecc-ccCCCcccccCCCCCCCCeEEEEe----------cCE
Q 014590 342 GEVLSRCV-------MDIGS----ASSSSNKVSGVIERNEGR-RLSAGCCIDRIPKTIRPPITCLAV----------GMK 399 (422)
Q Consensus 342 ~~~~~~~~-------~~~~~----~~~~~~s~d~~i~~~~~~-~~~~~~~~~~~~~~h~~~v~~i~~----------~~~ 399 (422)
|.....+. .|... ..+...+.||.+.+.... .+..- ....+.-+.+..+.. =+.
T Consensus 259 g~t~~vy~~p~l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~~sl~~~----~s~~g~lq~~~~~el~~eIFsSPvii~g 334 (354)
T KOG4649|consen 259 GTTLHVYLSPKLRFDLHSPGISYPKLLRRSSGDGKVMILMTSKSLAEI----SSNGGELQNLEAIELSNEIFSSPVIIDG 334 (354)
T ss_pred CcEEEEEeCcccceeccCCCCcchhhhhhhcCCCcEEEEEeccccccc----ccCCCccceEEEeecCcccccCCeEEcc
Confidence 75544332 22221 245667778877643221 11110 000111122332222 135
Q ss_pred EEEEEeCCCeEEEEEccCC
Q 014590 400 KVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 400 ~l~s~s~Dg~i~iW~~~~~ 418 (422)
+|+.|+.|..++-||+++.
T Consensus 335 rl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 335 RLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred EEEEEEccCeEEEEecccc
Confidence 6888999999999999764
No 292
>smart00256 FBOX A Receptor for Ubiquitination Targets.
Probab=98.86 E-value=3.1e-09 Score=63.48 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=38.4
Q ss_pred cCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHH
Q 014590 27 LNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQL 66 (422)
Q Consensus 27 Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 66 (422)
||.|++.+||.+|++.++.++++|||.|+.++.++..|+.
T Consensus 1 lP~~ll~~I~~~l~~~d~~~~~~vc~~~~~~~~~~~~~~~ 40 (41)
T smart00256 1 LPDEILEEILSKLPPKDLLRLRKVSRRWRSLIDSHDFWFK 40 (41)
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcChhhhhc
Confidence 7999999999999999999999999999999999999974
No 293
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.85 E-value=2.7e-06 Score=71.20 Aligned_cols=189 Identities=14% Similarity=0.176 Sum_probs=119.4
Q ss_pred cCCeEEEEecCCeEEEEEcCCC--eEEEeeeCC----CceeeEEEecCCCeEE-EecCCeEEEEECCCCcee-e------
Q 014590 121 KRGLILTGVGDKVMRLWSLEGY--KCVEEYSLP----NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-F------ 186 (422)
Q Consensus 121 ~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~-~------ 186 (422)
++|.++..-.|..|.|=...+. ..+.....+ ..-.-++||||+..|+ +...|+|+++|+.+.... .
T Consensus 7 ~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~ 86 (282)
T PF15492_consen 7 SDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSF 86 (282)
T ss_pred CCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCccccc
Confidence 4665555666777777665542 222333322 2235599999999999 889999999999864421 1
Q ss_pred ecCCCceeeeEEEeeeC------CeEEEecCCCeEEEEeCCCc-----ceeeeee---cCCccEEEEEecCC-CEEEEEc
Q 014590 187 PSREGTFMKGLCMRYFD------PEAVVGCEDGTARVFDMYSR-----KCSQIIR---MHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~------~~l~~~~~d~~i~iwd~~~~-----~~~~~~~---~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
.......+..+.+.... ..|++-..+|.++=|-+..+ +..+++. .+...|.++.++|+ ++|++|+
T Consensus 87 ~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG 166 (282)
T PF15492_consen 87 PGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGG 166 (282)
T ss_pred CCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEec
Confidence 11111122222222211 12666677777776664322 2333332 24668999999998 7777665
Q ss_pred CCC-----------cEEEEeCCCCccc------------------------------------cceEeEEEecCCCEEEE
Q 014590 252 SLG-----------SIAISGLSSDQRL------------------------------------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 252 ~dg-----------~i~iwd~~~~~~~------------------------------------~~v~~~~~~~~~~~l~~ 284 (422)
... -+..|.+-++... ..|..|..||||..||+
T Consensus 167 ~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ 246 (282)
T PF15492_consen 167 CEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLAC 246 (282)
T ss_pred cCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEE
Confidence 321 2455655443322 67889999999999999
Q ss_pred EeCCCeEEEEECCCCeeeeeeccCC
Q 014590 285 GTTAGYASCWDLRTMKSLWETRISP 309 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~~~~~~~~~~ 309 (422)
...+|.|.+|++.+.+...++..++
T Consensus 247 ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 247 IHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred EEcCCeEEEEecCcchhhcccchhh
Confidence 9999999999999877776665443
No 294
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.85 E-value=1.8e-07 Score=76.66 Aligned_cols=218 Identities=13% Similarity=0.155 Sum_probs=130.2
Q ss_pred eeeEEeeccccce--eEEEecCCeEEEEecCCeEEEEEcCCCeEE-EeeeC-CCceeeEEEecCCCeEEEec------CC
Q 014590 103 IDIDQWKAHSVGV--DQCRMKRGLILTGVGDKVMRLWSLEGYKCV-EEYSL-PNAASLVDFDFDESKIVGLI------GT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v--~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~~------~~ 172 (422)
.+.+.+.-|+++- ..+..++..++++..||.+.+.+.+.-..+ ..+.. +......++...++.+.+.. -+
T Consensus 80 ~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d 159 (319)
T KOG4714|consen 80 DPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQD 159 (319)
T ss_pred CceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecc
Confidence 3445555555543 334446779999999999999997651111 11111 11112233444555554322 34
Q ss_pred eEEEEECCCCceeee-cCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc-eeeeeecCCccEEEEEecCC--CEE
Q 014590 173 RICIWRRNGLRSVFP-SREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-CSQIIRMHCAPVTSLSLSED--QLI 247 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~~~--~~l 247 (422)
..+.|+++..+.... ......+...|..+.... +++|+.||.+.+||.+... +...+..|..+++.+-|+|. ..|
T Consensus 160 ~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~L 239 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHL 239 (319)
T ss_pred ceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchhe
Confidence 566677665543322 222222445555554444 8899999999999998874 45566889999999999975 789
Q ss_pred EEEcCCCcEEEEeCCCCccccceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeee---ec-cCCCceeeeeeEecCCC
Q 014590 248 ISGSSLGSIAISGLSSDQRLTGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWE---TR-ISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~---~~-~~~~~v~~l~~~s~~~~ 323 (422)
++++.||.+..||..+ .+|.++.....+..|=- +.++.. +. .-.....++.-|.--|.
T Consensus 240 ft~sedGslw~wdas~----------------~~l~i~~~~s~~s~WLs--gD~v~s~i~i~~ll~~~~~SinsfDV~g~ 301 (319)
T KOG4714|consen 240 FTCSEDGSLWHWDAST----------------TFLSISNQASVISSWLS--GDPVKSRIEITSLLPSRSLSINSFDVLGP 301 (319)
T ss_pred eEecCCCcEEEEcCCC----------------ceEEecCcccccccccc--CCcccceEeeeccccccceeeeeeeccCc
Confidence 9999999999999753 23333333333555521 111111 11 11222333333556788
Q ss_pred EEEEEecCCeEEEEE
Q 014590 324 TLVVGGIDGVLRVLD 338 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd 338 (422)
.|++|+.-+.|++++
T Consensus 302 ~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 302 CLVCGTDAEAIYLTR 316 (319)
T ss_pred eEEeccccceEEEec
Confidence 999999999998875
No 295
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.84 E-value=1.4e-06 Score=78.94 Aligned_cols=219 Identities=14% Similarity=0.159 Sum_probs=130.7
Q ss_pred EEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEec------------CCeEEEEECCCC
Q 014590 117 QCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLI------------GTRICIWRRNGL 182 (422)
Q Consensus 117 ~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~i~~w~~~~~ 182 (422)
-+.| |.| ||+|--.- -|.+|--++-..++.|.++ .+..+.|||..++|+..+ ...+.|||+.++
T Consensus 215 yv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG 292 (698)
T KOG2314|consen 215 YVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATG 292 (698)
T ss_pred eEEecCCceEEEEEecc-ceeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcccc
Confidence 3556 456 88887764 4778876666666666554 678899999999998321 257999999998
Q ss_pred cee--eecC--CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC----
Q 014590 183 RSV--FPSR--EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL---- 253 (422)
Q Consensus 183 ~~~--~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d---- 253 (422)
... +... ....-....|+.+++++|.-.. .+|.||+..+-.++..-.-.-..|....|+|. +.|+-=+..
T Consensus 293 ~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~ 371 (698)
T KOG2314|consen 293 LLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNI 371 (698)
T ss_pred chhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCC
Confidence 743 3332 2223346778888888765554 47888886543222111111223344444443 222211100
Q ss_pred -----------------------------------------------------CcEEEEeCCCCccc-------cceEeE
Q 014590 254 -----------------------------------------------------GSIAISGLSSDQRL-------TGIKTL 273 (422)
Q Consensus 254 -----------------------------------------------------g~i~iwd~~~~~~~-------~~v~~~ 273 (422)
..+-|+.++..... ..|...
T Consensus 372 parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~F 451 (698)
T KOG2314|consen 372 PARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAF 451 (698)
T ss_pred cceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeee
Confidence 01122222211111 778889
Q ss_pred EEecCCCEEEEEeC---CCeEEEEECCC-C---eeeeeeccCCCceeeeeeEecCCCEEEEEe---cCCeEEEEECCC
Q 014590 274 CYNPCSRLVFAGTT---AGYASCWDLRT-M---KSLWETRISPNVVYSLQHLQNDTSTLVVGG---IDGVLRVLDQNT 341 (422)
Q Consensus 274 ~~~~~~~~l~~g~~---dg~i~iwd~~~-~---~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~---~dg~v~vwd~~~ 341 (422)
+|-|.|+.+++-+. ..++.+|.+.+ . +++.++.. ...+.+. |+|.|++++.+. ..|.+.++|...
T Consensus 452 aWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vf-wsPkG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 452 AWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVF-WSPKGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred eeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEE-EcCCCcEEEEEEecccccceEEEecch
Confidence 99999987776542 35688888773 1 23333332 3456675 999999888764 578899999874
No 296
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.83 E-value=2.1e-08 Score=93.34 Aligned_cols=198 Identities=16% Similarity=0.147 Sum_probs=135.3
Q ss_pred eEEeeccccceeEEEec---CCeEEEEecCCeEEEEEcCCCe-EEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECC
Q 014590 105 IDQWKAHSVGVDQCRMK---RGLILTGVGDKVMRLWSLEGYK-CVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRN 180 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~ 180 (422)
-..+.||..+|+.+.|. .+.+++++.|-.+..||+.+.. .+..+.. |+.
T Consensus 107 ef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~--------------------------w~s- 159 (1081)
T KOG0309|consen 107 EFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSS--------------------------WRS- 159 (1081)
T ss_pred EEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeec--------------------------ccc-
Confidence 35688999999999994 3399999999999999987532 2222111 100
Q ss_pred CCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEE
Q 014590 181 GLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIA 257 (422)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~ 257 (422)
....+.+++-.+.+.+.+..+.|.+||.+.| .++..+++|...|+.++|..- ..+.+.+.|++++
T Consensus 160 ------------~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvk 227 (1081)
T KOG0309|consen 160 ------------AASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVK 227 (1081)
T ss_pred ------------cCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCcee
Confidence 0124556666666777778889999999876 478888999999999999743 6899999999999
Q ss_pred EEeCCCCccc--------cceEeEEEecCCCEEEEEe--CCCeEEEE---------ECCC-CeeeeeeccCCCceeeeee
Q 014590 258 ISGLSSDQRL--------TGIKTLCYNPCSRLVFAGT--TAGYASCW---------DLRT-MKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 258 iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~--~dg~i~iw---------d~~~-~~~~~~~~~~~~~v~~l~~ 317 (422)
.||....... .+|..-.+.|-|.-...-- .+..+.++ +..+ .+++.++.||...|....|
T Consensus 228 fw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlW 307 (1081)
T KOG0309|consen 228 FWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLW 307 (1081)
T ss_pred eecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhh
Confidence 9998654332 5555555666443222211 12233333 3322 3678999999988766542
Q ss_pred -------EecCCC--EEEEEecCCeEEEEECCC
Q 014590 318 -------LQNDTS--TLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 318 -------~s~~~~--~l~s~~~dg~v~vwd~~~ 341 (422)
+..+.+ .|++=+.|.++++|-+.+
T Consensus 308 R~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 308 RKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred hhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 111222 799999999999997753
No 297
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.83 E-value=3.6e-06 Score=74.94 Aligned_cols=196 Identities=14% Similarity=0.137 Sum_probs=136.8
Q ss_pred ecCCeEEEEEcCCCeEEEeeeCC-------Ccee------eEE-Eec-CCCeEEEecCCeEEEEECCCCceeeecCCCce
Q 014590 129 VGDKVMRLWSLEGYKCVEEYSLP-------NAAS------LVD-FDF-DESKIVGLIGTRICIWRRNGLRSVFPSREGTF 193 (422)
Q Consensus 129 ~~dg~v~iwd~~~~~~~~~~~~~-------~~~~------~~~-~~~-~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~ 193 (422)
+.-|.|.++|.++.... .+... .... .+. |++ +|++++.-+.|+..+.+...+-.+...+.+.
T Consensus 284 q~~GdIylydP~td~le-kldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~iqv~~~~~- 361 (668)
T COG4946 284 QNAGDIYLYDPETDSLE-KLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSIQVGKKGG- 361 (668)
T ss_pred ecCCcEEEeCCCcCcce-eeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeEEcCCCCc-
Confidence 33477999998874332 22211 1111 111 444 6777776667788887776665554444444
Q ss_pred eeeEEEeeeCCeEEEecCCC-eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc----
Q 014590 194 MKGLCMRYFDPEAVVGCEDG-TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---- 267 (422)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---- 267 (422)
+.-..+...++.++.|..|| .+-|+|.++++. +.+...-+.|.++..+++ ..++.+.....+.+.|+.++...
T Consensus 362 VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idk 440 (668)
T COG4946 362 VRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDK 440 (668)
T ss_pred eEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecc
Confidence 33444555555689999998 899999987764 445556788999999987 77888888889999999998866
Q ss_pred ---cceEeEEEecCCCEEEEEeCCC----eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAG----YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
+-|+..+|+|+++++|-+.-+| .|+++|+.+++....- ...+.=.+-+ |.|++++|.--+
T Consensus 441 S~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT-T~ta~DfsPa-FD~d~ryLYfLs 507 (668)
T COG4946 441 SEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT-TPTAYDFSPA-FDPDGRYLYFLS 507 (668)
T ss_pred cccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec-CCcccccCcc-cCCCCcEEEEEe
Confidence 8899999999999999887665 5899999987765332 2222234555 889999776544
No 298
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.83 E-value=1.5e-06 Score=71.66 Aligned_cols=217 Identities=11% Similarity=-0.018 Sum_probs=137.7
Q ss_pred CCeEEEEecCCeEEEEEcCCCeEE-EeeeCCCc-eeeEEEecC--CCeEEEecCCeEEEEECCCCceeeecCCC-ceeee
Q 014590 122 RGLILTGVGDKVMRLWSLEGYKCV-EEYSLPNA-ASLVDFDFD--ESKIVGLIGTRICIWRRNGLRSVFPSREG-TFMKG 196 (422)
Q Consensus 122 ~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~-~~~~~~~~~--~~~l~~~~~~~i~~w~~~~~~~~~~~~~~-~~~~~ 196 (422)
.++||.|+.-|...+|...+.+.. +....+.. +....=.-+ -..++++.|.++++.+++.+...+..+.. -....
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns 163 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNS 163 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceee
Confidence 459999999999999999865433 22222211 111111111 22344888999999998876644444433 22345
Q ss_pred EEEeeeCCeEEEecCCCeEEEEeCCCc-c-eeeeee-cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-----
Q 014590 197 LCMRYFDPEAVVGCEDGTARVFDMYSR-K-CSQIIR-MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 197 ~~~~~~~~~l~~~~~d~~i~iwd~~~~-~-~~~~~~-~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----- 267 (422)
..++.++..+++.+....|..|.+... + .+.+.. ..++.-.+..|+.. ..+|+++.||++.+||++.....
T Consensus 164 ~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~s 243 (344)
T KOG4532|consen 164 LHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEIS 243 (344)
T ss_pred eEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhc
Confidence 566677777888888899999987543 2 233222 22334456778754 79999999999999999876544
Q ss_pred -------cceEeEEEecCC--CEEEEEeCCCeEEEEECCCCeeeeeecc-------CC-CceeeeeeEecCCCEEEEEec
Q 014590 268 -------TGIKTLCYNPCS--RLVFAGTTAGYASCWDLRTMKSLWETRI-------SP-NVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 268 -------~~v~~~~~~~~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~-------~~-~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+.+..+.|++.| .+|+..-.-+.+.+.|++++.....+.. |. ..|..-. |+.++..+.+.++
T Consensus 244 strp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~-f~~~n~s~~v~~e 322 (344)
T KOG4532|consen 244 STRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTN-FNNENESNDVKNE 322 (344)
T ss_pred ccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccccccccccc-ccCCCcccccccc
Confidence 889999999866 3455555567899999998865544332 22 2255555 6666665555554
Q ss_pred CCeEEEEECC
Q 014590 331 DGVLRVLDQN 340 (422)
Q Consensus 331 dg~v~vwd~~ 340 (422)
+. +.=|++.
T Consensus 323 ~~-~ae~ni~ 331 (344)
T KOG4532|consen 323 LQ-GAEYNIL 331 (344)
T ss_pred hh-hheeecc
Confidence 43 3444443
No 299
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.82 E-value=6.4e-09 Score=97.12 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=94.0
Q ss_pred eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcC----------CCcEEEEeCCCCccc-------
Q 014590 205 EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSS----------LGSIAISGLSSDQRL------- 267 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~------- 267 (422)
.++.|...|+|.++|+.++..-..+..|+..|.++.|..+..+++.+. -+.+.+-|+++|...
T Consensus 439 LvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~ 518 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQK 518 (1062)
T ss_pred eEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCC
Confidence 388999999999999999999899999999999999976655555443 245778899988765
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
.+|..+..+..|+|++....+.-+.+||+++..+++.....-..++.+. |+
T Consensus 519 ~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~a~P~it~le-Ws 572 (1062)
T KOG1912|consen 519 PDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSLALPLITVLE-WS 572 (1062)
T ss_pred CCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhhcCCcEEEEe-ec
Confidence 8999999999999999999999999999998777665544434478888 55
No 300
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.80 E-value=1.2e-05 Score=72.40 Aligned_cols=234 Identities=9% Similarity=0.093 Sum_probs=144.7
Q ss_pred cceeEEEe-cCC-eEEEEecCC---------------eEEEEEcCCCeEEEeeeCCCce----eeEEEecCCCeEEEecC
Q 014590 113 VGVDQCRM-KRG-LILTGVGDK---------------VMRLWSLEGYKCVEEYSLPNAA----SLVDFDFDESKIVGLIG 171 (422)
Q Consensus 113 ~~v~~v~~-~~~-~l~s~~~dg---------------~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~ 171 (422)
..|.-+.| +.+ ||.|=+... .+.+||..+|..+..+...... ..+.|+.+..+++--..
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~ 151 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG 151 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc
Confidence 45677777 455 888865433 4999999999999999875443 46899999999884467
Q ss_pred CeEEEEECCCCcee--eecCCCceeeeEEEeeeC--CeEE-----EecCCCeEEEEeCCCcceeeeeecCCccEEEEEec
Q 014590 172 TRICIWRRNGLRSV--FPSREGTFMKGLCMRYFD--PEAV-----VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 172 ~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~l~-----~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 242 (422)
..++++++...... +....-..+....+++.+ +.|+ .....+.+++|.+..+..+.+-.-....=..+.|.
T Consensus 152 ~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~ 231 (561)
T COG5354 152 SSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQ 231 (561)
T ss_pred CeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEe
Confidence 78999987222111 111111111223333322 2233 23557788999887666554322222222345665
Q ss_pred CC-CEEEEE-----------cCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEE--eCCCeEEEEECCCCeee
Q 014590 243 ED-QLIISG-----------SSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAG--TTAGYASCWDLRTMKSL 302 (422)
Q Consensus 243 ~~-~~l~s~-----------~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g--~~dg~i~iwd~~~~~~~ 302 (422)
+. ++++.- -.+..+++++++..... ++|...+|.|.++.+++. .....+.++|++.. ..
T Consensus 232 ~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~ 310 (561)
T COG5354 232 VLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LR 310 (561)
T ss_pred cCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eE
Confidence 43 332211 12356788887643322 899999999998876654 47788999999854 33
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecC---CeEEEEECCCCceEE-Eeee
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQNTGEVLS-RCVM 350 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~-~~~~ 350 (422)
.-+ .+..-+.+. |+|.+++++.++-| |.+-+||........ .+.+
T Consensus 311 ~~~--Pe~~rNT~~-fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~ 359 (561)
T COG5354 311 FYF--PEQKRNTIF-FSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG 359 (561)
T ss_pred Eec--CCccccccc-ccCcccEEEEecCCccccceEEeccCCceEEEEEeec
Confidence 333 333445565 99999999987765 679999987443333 4433
No 301
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.79 E-value=2.7e-08 Score=84.50 Aligned_cols=145 Identities=17% Similarity=0.221 Sum_probs=111.5
Q ss_pred EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc-----------cceEeEE
Q 014590 207 VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-----------TGIKTLC 274 (422)
Q Consensus 207 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~ 274 (422)
++.+.+-.|-+-|+++|.. +.|. ..+.|.++.|.. ++++..|..+|.|...|++.+..- +.|+++.
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq 305 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQ 305 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhh
Confidence 4445566788888887743 2333 456788888885 699999999999999999876322 6777777
Q ss_pred Eec-CCCEEEEEeCCCeEEEEECCCCee---eeeeccCCCceeeee-eEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 275 YNP-CSRLVFAGTTAGYASCWDLRTMKS---LWETRISPNVVYSLQ-HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 275 ~~~-~~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~l~-~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
.-. ++++|++.+.+|+|++||.+.-++ +.++.+|-+.-.-+- -..+.+..+++++.|...+||.++.|..+.+++
T Consensus 306 ~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 306 ILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP 385 (425)
T ss_pred hhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence 655 788999999999999999997666 888888864333222 145777799999999999999999999998887
Q ss_pred ecCC
Q 014590 350 MDIG 353 (422)
Q Consensus 350 ~~~~ 353 (422)
....
T Consensus 386 f~~s 389 (425)
T KOG2695|consen 386 FPYS 389 (425)
T ss_pred CCCc
Confidence 6433
No 302
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.77 E-value=1.3e-05 Score=76.65 Aligned_cols=225 Identities=16% Similarity=0.166 Sum_probs=144.8
Q ss_pred ecC-CeEEEEecCCeEEEEEcCCCeEEEeeeCCCce------ee-EEEecCCCeEEEe---------cCCeEEEEECCCC
Q 014590 120 MKR-GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA------SL-VDFDFDESKIVGL---------IGTRICIWRRNGL 182 (422)
Q Consensus 120 ~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~------~~-~~~~~~~~~l~~~---------~~~~i~~w~~~~~ 182 (422)
+.+ +.++.++.++.|.-+|.++|+.+..+...... .. ..+. ++..++++ .++.+..+|..++
T Consensus 107 ~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG 185 (488)
T cd00216 107 YWDPRKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETG 185 (488)
T ss_pred EccCCeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCC
Confidence 345 68888889999999999999999888764331 11 1111 23333443 3578899999988
Q ss_pred ceeeecCCCce---------------------e-eeEEEeeeCCeEEEecCCC------------------eEEEEeCCC
Q 014590 183 RSVFPSREGTF---------------------M-KGLCMRYFDPEAVVGCEDG------------------TARVFDMYS 222 (422)
Q Consensus 183 ~~~~~~~~~~~---------------------~-~~~~~~~~~~~l~~~~~d~------------------~i~iwd~~~ 222 (422)
+.++....... + ....+...+..++.++.++ .|.-+|..+
T Consensus 186 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~t 265 (488)
T cd00216 186 KLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADT 265 (488)
T ss_pred ceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCC
Confidence 87654322100 0 0112222345577776655 799999999
Q ss_pred cceeeeeecCCccE-----------EEEE-ecCC--CEEEEEcCCCcEEEEeCCCCccc--cc--eEeEEEecCCCEEEE
Q 014590 223 RKCSQIIRMHCAPV-----------TSLS-LSED--QLIISGSSLGSIAISGLSSDQRL--TG--IKTLCYNPCSRLVFA 284 (422)
Q Consensus 223 ~~~~~~~~~~~~~v-----------~~l~-~~~~--~~l~s~~~dg~i~iwd~~~~~~~--~~--v~~~~~~~~~~~l~~ 284 (422)
|+....++.-.... ..+. ...+ ..++.++.+|.+...|.++|+.+ .. ...++.+| ..++.
T Consensus 266 G~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~~--~~vyv 343 (488)
T cd00216 266 GKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYDP--GLVYL 343 (488)
T ss_pred CCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeeccccccCC--ceEEE
Confidence 99988765211111 1111 1111 26888889999999999999987 11 12344545 34444
Q ss_pred Ee------------------CCCeEEEEECCCCeeeeeeccCC--------Cce--eeeeeEecCCCEEEEEecCCeEEE
Q 014590 285 GT------------------TAGYASCWDLRTMKSLWETRISP--------NVV--YSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 285 g~------------------~dg~i~iwd~~~~~~~~~~~~~~--------~~v--~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
+. .+|.+.-.|+.+|+.+++..... ... ..+. ..+..|+.++.||.|+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~---~~g~~v~~g~~dG~l~a 420 (488)
T cd00216 344 GAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA---TAGNLVFAGAADGYFRA 420 (488)
T ss_pred ccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE---ecCCeEEEECCCCeEEE
Confidence 32 36789999999999988765431 111 1222 35678999999999999
Q ss_pred EECCCCceEEEeee
Q 014590 337 LDQNTGEVLSRCVM 350 (422)
Q Consensus 337 wd~~~~~~~~~~~~ 350 (422)
+|..+|+.+.++..
T Consensus 421 ld~~tG~~lW~~~~ 434 (488)
T cd00216 421 FDATTGKELWKFRT 434 (488)
T ss_pred EECCCCceeeEEEC
Confidence 99999999988765
No 303
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.77 E-value=4.2e-05 Score=73.41 Aligned_cols=181 Identities=13% Similarity=0.130 Sum_probs=114.8
Q ss_pred cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceee------------EEEecCCCeEEEecCCeEEEEECCCCceeeec
Q 014590 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL------------VDFDFDESKIVGLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 121 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~ 188 (422)
.++.++.++.++.|.-.|..+|+.+..+........ +++ .++..++++.++.+.-.|.++++.+...
T Consensus 68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av-~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL-YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE-ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 467888888889999999999999988765321110 111 1344445888999999999999877554
Q ss_pred CCCceee----eEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCC-------------------------
Q 014590 189 REGTFMK----GLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHC------------------------- 233 (422)
Q Consensus 189 ~~~~~~~----~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~------------------------- 233 (422)
....... ...-...+..++++.. +|.|..+|.++|+.+..+..-.
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~ 226 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD 226 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence 3221100 0011112344555543 6899999999999877653211
Q ss_pred ------ccEE-EEEecCC-CEEEEEcCC-----C-----------cEEEEeCCCCccc----------------cceEeE
Q 014590 234 ------APVT-SLSLSED-QLIISGSSL-----G-----------SIAISGLSSDQRL----------------TGIKTL 273 (422)
Q Consensus 234 ------~~v~-~l~~~~~-~~l~s~~~d-----g-----------~i~iwd~~~~~~~----------------~~v~~~ 273 (422)
+.++ .+++.|. ++++.+..+ + .|.-.|+++|+.. ....-+
T Consensus 227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~ 306 (527)
T TIGR03075 227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILF 306 (527)
T ss_pred ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEE
Confidence 1111 2355554 566655422 2 5777788888876 222223
Q ss_pred EEecCCC---EEEEEeCCCeEEEEECCCCeee
Q 014590 274 CYNPCSR---LVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 274 ~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
.+..+|+ .++.+..+|.+++.|.++|+++
T Consensus 307 d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 307 DLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 3334665 7889999999999999999886
No 304
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.77 E-value=3.2e-08 Score=58.28 Aligned_cols=39 Identities=28% Similarity=0.343 Sum_probs=36.8
Q ss_pred CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 299 MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
++++.++.+|.+.|++++ |+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~-~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIA-WSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEE-EETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEE-EecccccceeeCCCCEEEEEC
Confidence 467889999999999999 999999999999999999997
No 305
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.75 E-value=1.9e-05 Score=73.53 Aligned_cols=210 Identities=10% Similarity=-0.019 Sum_probs=124.2
Q ss_pred eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCe-EE-Eec---CCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 133 VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK-IV-GLI---GTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~-~~~---~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
.|.+=|.+... .+.+........-.|+|||+. ++ .+. +..|.++|+.+++.. +....+ ......+++++..+
T Consensus 170 ~l~~~d~dg~~-~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g-~~~~~~~SPDG~~l 247 (419)
T PRK04043 170 NIVLADYTLTY-QKVIVKGGLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQG-MLVVSDVSKDGSKL 247 (419)
T ss_pred eEEEECCCCCc-eeEEccCCCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCC-cEEeeEECCCCCEE
Confidence 44444443332 332333334456899999985 44 333 356999999887643 223333 22345678888774
Q ss_pred E-EecC--CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCC--cEEEEeCCCCccc----cceEeEEE
Q 014590 207 V-VGCE--DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLG--SIAISGLSSDQRL----TGIKTLCY 275 (422)
Q Consensus 207 ~-~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg--~i~iwd~~~~~~~----~~v~~~~~ 275 (422)
+ +.+. +..|.++|+.+++... +..+........|+|| +.++..+ ..+ .|.+.|+.+++.. .......|
T Consensus 248 a~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~~~~ 326 (419)
T PRK04043 248 LLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNNSSV 326 (419)
T ss_pred EEEEccCCCcEEEEEECCCCcEEE-cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCcCceE
Confidence 4 3333 3578888987776443 3333333345579987 5555444 333 6888888877653 22233589
Q ss_pred ecCCCEEEEEeCC---------CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC---CeEEEEECCCCc
Q 014590 276 NPCSRLVFAGTTA---------GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQNTGE 343 (422)
Q Consensus 276 ~~~~~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~~~~ 343 (422)
+|||+.++..... ..|.+.|+.++... .+... ....... |+|||+.|+..+.+ ..+.+.++. |.
T Consensus 327 SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~-~~~~~p~-~SPDG~~I~f~~~~~~~~~L~~~~l~-g~ 402 (419)
T PRK04043 327 STYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTAN-GVNQFPR-FSSDGGSIMFIKYLGNQSALGIIRLN-YN 402 (419)
T ss_pred CCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCC-CCcCCeE-ECCCCCEEEEEEccCCcEEEEEEecC-CC
Confidence 9999988877643 36888898877543 33332 2223466 99999977765543 235666765 44
Q ss_pred eEEEee
Q 014590 344 VLSRCV 349 (422)
Q Consensus 344 ~~~~~~ 349 (422)
....+.
T Consensus 403 ~~~~l~ 408 (419)
T PRK04043 403 KSFLFP 408 (419)
T ss_pred eeEEee
Confidence 444443
No 306
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.74 E-value=2.1e-05 Score=67.98 Aligned_cols=203 Identities=14% Similarity=0.105 Sum_probs=128.6
Q ss_pred eEEEEecCC-eEEEEEcCCCeEEEeeeCCCceee---EEEecCCCeEEEec------CCeEEEEECCCC-ceeeec-CCC
Q 014590 124 LILTGVGDK-VMRLWSLEGYKCVEEYSLPNAASL---VDFDFDESKIVGLI------GTRICIWRRNGL-RSVFPS-REG 191 (422)
Q Consensus 124 ~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~------~~~i~~w~~~~~-~~~~~~-~~~ 191 (422)
.++.+-.-| ...+||..+++....+..+....+ -.|++||++|+++. .|.|-+||.... +.+-.- ..+
T Consensus 19 avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~G 98 (305)
T PF07433_consen 19 AVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHG 98 (305)
T ss_pred EEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCC
Confidence 444444444 346789999999888877655443 78999999998554 378999999843 332111 111
Q ss_pred ceeeeEEEeeeCCeEEEec------------------CCCeEEEEeCCCcceeee--e--ecCCccEEEEEecCCCEEEE
Q 014590 192 TFMKGLCMRYFDPEAVVGC------------------EDGTARVFDMYSRKCSQI--I--RMHCAPVTSLSLSEDQLIIS 249 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~------------------~d~~i~iwd~~~~~~~~~--~--~~~~~~v~~l~~~~~~~l~s 249 (422)
--..-+.+.++++.|+++. .+-.+...|..+|+.+.. + ..|.-.|..+++.++..++.
T Consensus 99 IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~ 178 (305)
T PF07433_consen 99 IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAF 178 (305)
T ss_pred cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEE
Confidence 1112344555665544442 344566778888887766 3 33777899999987765555
Q ss_pred EcCC-C-------cEEEEeCCC---------Cccc---cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccC
Q 014590 250 GSSL-G-------SIAISGLSS---------DQRL---TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 250 ~~~d-g-------~i~iwd~~~---------~~~~---~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
+... | -+-+++-.. .... ..+-+|++++++.++++.+ ..+.+.+||..+++.+......
T Consensus 179 a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~ 258 (305)
T PF07433_consen 179 AMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP 258 (305)
T ss_pred EEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC
Confidence 5321 1 133333222 1111 8899999999999887666 5778999999999988766543
Q ss_pred CCceeeeeeEecCCCEEEEEec
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
.+..++ ..+++ ++++.+.
T Consensus 259 --D~cGva-~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 259 --DACGVA-PTDDG-FLVSSGQ 276 (305)
T ss_pred --ceeeee-ecCCc-eEEeCCC
Confidence 356666 44444 5555543
No 307
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.71 E-value=4.8e-07 Score=86.48 Aligned_cols=174 Identities=14% Similarity=0.163 Sum_probs=129.1
Q ss_pred CCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEE
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~ 240 (422)
++..++ |+....+..+|+.+.+......-+.. .+.-+..++..+.+|...|+|.+-|..+-+.++++..|++.|.++.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~-~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD 224 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSAS-GVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD 224 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCC-ceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeee
Confidence 344444 77778888889888775433222221 1455666777899999999999999999999999999999999888
Q ss_pred ecCCCEEEEEcC---------CCcEEEEeCCCCccc------cceEeEEEecCC-CEEEEEeCCCeEEEEECCC-Cee-e
Q 014590 241 LSEDQLIISGSS---------LGSIAISGLSSDQRL------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRT-MKS-L 302 (422)
Q Consensus 241 ~~~~~~l~s~~~---------dg~i~iwd~~~~~~~------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~-~~~-~ 302 (422)
. .++.+++++. |.-|++||++..+.+ ....-+.|.|.- ..+++.+..|...+-|..+ +++ .
T Consensus 225 v-~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~ 303 (1118)
T KOG1275|consen 225 V-QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPA 303 (1118)
T ss_pred c-cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCcc
Confidence 7 5677887764 556899999988776 333445666643 5688888899999988543 222 2
Q ss_pred eeec--cCCCceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 303 WETR--ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 303 ~~~~--~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
..+. .....+.++. ++++++.|+.|..+|.|.+|-
T Consensus 304 ~~~~v~p~~s~i~~fD-iSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 304 GVKMVNPNGSGISAFD-ISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ceeEEccCCCcceeEE-ecCCCceEEEecccCcEeeec
Confidence 2222 2234588888 999999999999999999996
No 308
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.70 E-value=7.2e-08 Score=56.73 Aligned_cols=36 Identities=19% Similarity=0.545 Sum_probs=33.1
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWS 138 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd 138 (422)
+.++++++|.+.|.+++| +++ +|+||+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 578899999999999999 555 999999999999997
No 309
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=2.2e-08 Score=95.05 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=156.3
Q ss_pred eeEEeeccccceeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE--EecCC-eEEEE
Q 014590 104 DIDQWKAHSVGVDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV--GLIGT-RICIW 177 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~--~~~~~-~i~~w 177 (422)
..++|+.|+...+|++|+.+ +|+.|+..|.|+++++.+|.....+.+|... ..+.-+.||..++ ++... -..+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 45678899999999999755 9999999999999999999999999988655 4477888998877 23333 57789
Q ss_pred ECCCCc-eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee----cCCccEEEEEecCCCEEEEEcC
Q 014590 178 RRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR----MHCAPVTSLSLSEDQLIISGSS 252 (422)
Q Consensus 178 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~l~~~~~~~l~s~~~ 252 (422)
++.... ....-... ..+.++.....-+.|.......+||++++.++.++- +.+-.-++..|+|...++- .
T Consensus 1173 ~~~s~~~~~Hsf~ed---~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl--n 1247 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFDED---KAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL--N 1247 (1516)
T ss_pred ccccccCcccccccc---ceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe--e
Confidence 876522 11111111 122222222224556666688999999998777642 1122336788888744443 4
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEE
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLV 326 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~ 326 (422)
||. +||++..+.+ ..-..-.|+|.|..++.-+ .|||+++.+.++....-. -..+. |...|..++
T Consensus 1248 dGv--LWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld--qc~Vt-FNstG~VmY 1317 (1516)
T KOG1832|consen 1248 DGV--LWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD--QCAVT-FNSTGDVMY 1317 (1516)
T ss_pred Cce--eeeeccHHHHhhhhhheecccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc--ceEEE-eccCccchh
Confidence 554 7999987665 2222335899999988776 489999988776654322 23444 666666554
Q ss_pred EEe------cC-----------CeEEEEECCCCceEEEeeecCCcccccCCCCCCe
Q 014590 327 VGG------ID-----------GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGV 365 (422)
Q Consensus 327 s~~------~d-----------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~ 365 (422)
..- .| ...+-+|...-..+.++.......-+.+-..|..
T Consensus 1318 a~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct~~~D~~ 1373 (1516)
T KOG1832|consen 1318 AMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCTEPTDSF 1373 (1516)
T ss_pred hhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhhhhcCCccce
Confidence 332 00 1234445555556666665554444444444443
No 310
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.70 E-value=0.00011 Score=63.59 Aligned_cols=205 Identities=16% Similarity=0.049 Sum_probs=132.4
Q ss_pred EEEec--CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEe-cCCCeEEEecCCeEEEEECCCCcee--eecC-
Q 014590 117 QCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD-FDESKIVGLIGTRICIWRRNGLRSV--FPSR- 189 (422)
Q Consensus 117 ~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~i~~w~~~~~~~~--~~~~- 189 (422)
+..|. ++ ++++--..+.|..|+..+++... +..+. ...+++. +++..+++.. +.+.++|..+++.. ....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~-~~G~~~~~~~g~l~v~~~-~~~~~~d~~~g~~~~~~~~~~ 80 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG-PNGMAFDRPDGRLYVADS-GGIAVVDPDTGKVTVLADLPD 80 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS-EEEEEEECTTSEEEEEET-TCEEEEETTTTEEEEEEEEET
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC-CceEEEEccCCEEEEEEc-CceEEEecCCCcEEEEeeccC
Confidence 45663 45 66666678999999998876543 44433 5557777 5644444554 55566698887532 2221
Q ss_pred ---CCceeeeEEEeeeCCeEEEecCC--------CeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE-EEEcCCCcE
Q 014590 190 ---EGTFMKGLCMRYFDPEAVVGCED--------GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSI 256 (422)
Q Consensus 190 ---~~~~~~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l-~s~~~dg~i 256 (422)
........++.+.+...++.... |.|..++.. ++...... .-...+.++|+|+ +.+ ++-+..+.|
T Consensus 81 ~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i 158 (246)
T PF08450_consen 81 GGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRI 158 (246)
T ss_dssp TCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEE
T ss_pred CCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeeccccccee
Confidence 23334455566666644444332 567778876 55443333 3455689999987 544 566788899
Q ss_pred EEEeCCCCcc-c-------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeE-ecC
Q 014590 257 AISGLSSDQR-L-------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHL-QND 321 (422)
Q Consensus 257 ~iwd~~~~~~-~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-s~~ 321 (422)
..+++..... + +..-.+++..+|++.++....+.|.++|.. |+.+..+......+++++ | .++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~-fgg~~ 236 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCA-FGGPD 236 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEE-EESTT
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEE-EECCC
Confidence 9999864332 1 247789999999988888889999999988 888887776656889998 6 466
Q ss_pred CCEEEEE
Q 014590 322 TSTLVVG 328 (422)
Q Consensus 322 ~~~l~s~ 328 (422)
.+.|+..
T Consensus 237 ~~~L~vT 243 (246)
T PF08450_consen 237 GKTLYVT 243 (246)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 6655544
No 311
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.67 E-value=9.7e-06 Score=73.65 Aligned_cols=224 Identities=9% Similarity=0.105 Sum_probs=128.0
Q ss_pred ceeEEEecC-C-eEEEEec-----------CCeEEEEEcCCCeEEEeeeCCCc----eeeEEEecCCCeEEEecCCeEEE
Q 014590 114 GVDQCRMKR-G-LILTGVG-----------DKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFDESKIVGLIGTRICI 176 (422)
Q Consensus 114 ~v~~v~~~~-~-~l~s~~~-----------dg~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~i~~ 176 (422)
.|.-+.|++ . ||+|-+. ...++|||+.+|...+.|..... -....||.|+++++.-...+|.+
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisI 330 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISI 330 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEEE
Confidence 356677743 3 9999764 25799999999999998887322 24589999999999555588888
Q ss_pred EECCCCcee-eecCCCceeeeEEEeeeCCe----------------EEEecCCC--------------------------
Q 014590 177 WRRNGLRSV-FPSREGTFMKGLCMRYFDPE----------------AVVGCEDG-------------------------- 213 (422)
Q Consensus 177 w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------------l~~~~~d~-------------------------- 213 (422)
|+......+ .....-..+....|++.+.. |+..-...
T Consensus 331 yEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcv 410 (698)
T KOG2314|consen 331 YETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCV 410 (698)
T ss_pred EecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEE
Confidence 876542111 00000000001111111111 11000111
Q ss_pred ---------------eEEEEeCCCcce-eeeeecCCccEEEEEecCC-CEEEEEc---CCCcEEEEeCCCCc-cc-----
Q 014590 214 ---------------TARVFDMYSRKC-SQIIRMHCAPVTSLSLSED-QLIISGS---SLGSIAISGLSSDQ-RL----- 267 (422)
Q Consensus 214 ---------------~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~-~~l~s~~---~dg~i~iwd~~~~~-~~----- 267 (422)
.+.|+.++.... +... .-...|...+|-|. +.+++-+ ...++.+|-+++.. ..
T Consensus 411 kvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~ 489 (698)
T KOG2314|consen 411 KVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKE 489 (698)
T ss_pred EEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhh
Confidence 111222211111 1111 12346677788875 4444332 24578888887422 11
Q ss_pred ---cceEeEEEecCCCEEEEEe---CCCeEEEEECCCCeeeeee-ccCCCceeeeeeEecCCCEEEEEecCC------eE
Q 014590 268 ---TGIKTLCYNPCSRLVFAGT---TAGYASCWDLRTMKSLWET-RISPNVVYSLQHLQNDTSTLVVGGIDG------VL 334 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~---~dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~s~~~~~l~s~~~dg------~v 334 (422)
...+.+.|+|.|++++++. ..|.+..+|+.-.....+- ..| ...+.+. |+|.|+|+++++.-. --
T Consensus 490 ~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~ve-WDPtGRYvvT~ss~wrhk~d~GY 567 (698)
T KOG2314|consen 490 LDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVE-WDPTGRYVVTSSSSWRHKVDNGY 567 (698)
T ss_pred hcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccce-ECCCCCEEEEeeehhhhccccce
Confidence 6678899999999998775 5788999998743322222 223 3456777 999999999998533 34
Q ss_pred EEEECC
Q 014590 335 RVLDQN 340 (422)
Q Consensus 335 ~vwd~~ 340 (422)
++|+++
T Consensus 568 ri~tfq 573 (698)
T KOG2314|consen 568 RIFTFQ 573 (698)
T ss_pred EEEEee
Confidence 555554
No 312
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.66 E-value=2.8e-06 Score=80.03 Aligned_cols=228 Identities=13% Similarity=0.068 Sum_probs=153.1
Q ss_pred ccceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCC-----------eEE--EecCCeEEE
Q 014590 112 SVGVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDES-----------KIV--GLIGTRICI 176 (422)
Q Consensus 112 ~~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~l~--~~~~~~i~~ 176 (422)
...-.++.|. .|++|-|+. ..|.+-|..+.+.++.++.|... ..+.|.|.+. .++ +...|.|.+
T Consensus 15 ~sN~~A~Dw~~~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil 93 (1062)
T KOG1912|consen 15 RSNRNAADWSPSGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIIL 93 (1062)
T ss_pred cccccccccCccceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEE
Confidence 3345567785 557777775 58899999999999999887654 4488876331 233 455699999
Q ss_pred EECCCCcee-eecCCCceeeeEEEeeeCCe----EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEE
Q 014590 177 WRRNGLRSV-FPSREGTFMKGLCMRYFDPE----AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIIS 249 (422)
Q Consensus 177 w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s 249 (422)
||......+ ...+.......++|.+..+. |++-....++.+|+..+|+....+........|+.+.| + +.+..
T Consensus 94 ~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~ 173 (1062)
T KOG1912|consen 94 VDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCV 173 (1062)
T ss_pred EEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEE
Confidence 999877643 33344444456677664432 66666678999999999999988876666777888887 3 44444
Q ss_pred EcCCCcEEEEeCCCCccc---------------------------------------cceEeEEEecCCCEEEEEeCCCe
Q 014590 250 GSSLGSIAISGLSSDQRL---------------------------------------TGIKTLCYNPCSRLVFAGTTAGY 290 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~---------------------------------------~~v~~~~~~~~~~~l~~g~~dg~ 290 (422)
-+..|.+.+-+.-..... .....++|+|.-+.++-......
T Consensus 174 l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~pre 253 (1062)
T KOG1912|consen 174 LGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRE 253 (1062)
T ss_pred EccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccc
Confidence 445555544443211110 11123566776655555555667
Q ss_pred EEEEECCCCeeeeeeccCCCceeeeeeEecCCC--EEEEEecCCeEEEEECCC
Q 014590 291 ASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS--TLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 291 i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~--~l~s~~~dg~v~vwd~~~ 341 (422)
+.++|++-..++.......+.+.-+. +-|+++ .|++.-.||.+.+|-.+.
T Consensus 254 llv~dle~~~~l~vvpier~~akfv~-vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 254 LLVFDLEYECCLAVVPIERGGAKFVD-VLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred eEEEcchhhceeEEEEeccCCcceeE-eccCCCcceEEEEecCCeEEEEEeec
Confidence 99999998888887776666666666 556655 799999999999997553
No 313
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.60 E-value=4.2e-05 Score=71.26 Aligned_cols=181 Identities=12% Similarity=-0.050 Sum_probs=111.3
Q ss_pred ceeEEEe-cCC-e-EEEEec---CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--Eec--CCeEEEEECCCCc
Q 014590 114 GVDQCRM-KRG-L-ILTGVG---DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLI--GTRICIWRRNGLR 183 (422)
Q Consensus 114 ~v~~v~~-~~~-~-l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~--~~~i~~w~~~~~~ 183 (422)
.+..-.| +|| . ++..+. +..|.++|+.+++...............|+|||+.++ .+. +..|.++++.++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 3445667 566 3 554333 3568999999887665555444455678999999887 222 3578888987776
Q ss_pred ee-eecCCCceeeeEEEeeeCCeEEEecC-CC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC-----
Q 014590 184 SV-FPSREGTFMKGLCMRYFDPEAVVGCE-DG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL----- 253 (422)
Q Consensus 184 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d----- 253 (422)
.. +....+ ......+++++..++..+. .+ .|.+.|+.+++..+.... ... ...|+|+ +.++..+..
T Consensus 269 ~~~LT~~~~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~ 344 (419)
T PRK04043 269 LTQITNYPG-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEF 344 (419)
T ss_pred EEEcccCCC-ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCccc
Confidence 33 222222 2223467888887555443 23 688888887776443321 111 2478887 555555433
Q ss_pred ----CcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCC---CeEEEEECCC
Q 014590 254 ----GSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTA---GYASCWDLRT 298 (422)
Q Consensus 254 ----g~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~ 298 (422)
..|.+.|+.++... .......|+|||+.++....+ ..+.+.++..
T Consensus 345 ~~~~~~I~v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 345 GKNTFNLYLISTNSDYIRRLTANGVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred CCCCcEEEEEECCCCCeEECCCCCCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 36888898777644 233457899999988766543 2366666653
No 314
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.59 E-value=2.5e-06 Score=80.71 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=106.6
Q ss_pred EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------cceEe
Q 014590 199 MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------TGIKT 272 (422)
Q Consensus 199 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~v~~ 272 (422)
....+..++-|+.+|.|++.+.+ +.+ .+...|... -..+.++++|+.||++.+..+-+.+.. .++.+
T Consensus 45 ~av~~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~-----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiks 117 (846)
T KOG2066|consen 45 CAVHDKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS-----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKS 117 (846)
T ss_pred HHhhcceeeeccccceEEEEecC-Ccc-ccccccccc-----ccCCceEEEecCCCcEEEeeccCCccceeEecCCccee
Confidence 33445569999999999999974 444 444445443 124689999999999999888777665 88999
Q ss_pred EEEecC-----CCEEEEEeCCCeEEEEECCCC--eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 273 LCYNPC-----SRLVFAGTTAGYASCWDLRTM--KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 273 ~~~~~~-----~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
++++|+ .+.+++|+.-| +.++.-+-. +....+....++|.++. | .|.++|-++.+| |+|||+.+++.+
T Consensus 118 ial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~-W--~g~lIAWand~G-v~vyd~~~~~~l 192 (846)
T KOG2066|consen 118 IALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIK-W--RGNLIAWANDDG-VKVYDTPTRQRL 192 (846)
T ss_pred EEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEE-e--cCcEEEEecCCC-cEEEecccccee
Confidence 999998 46889999888 777764421 11113555668999998 5 688999998888 999999998888
Q ss_pred EEeeecC
Q 014590 346 SRCVMDI 352 (422)
Q Consensus 346 ~~~~~~~ 352 (422)
..++...
T Consensus 193 ~~i~~p~ 199 (846)
T KOG2066|consen 193 TNIPPPS 199 (846)
T ss_pred eccCCCC
Confidence 7776543
No 315
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.59 E-value=8.7e-05 Score=64.99 Aligned_cols=215 Identities=17% Similarity=0.165 Sum_probs=138.3
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCc--------eeeEEEecCCCeEE---EecCCeEEEEECCCCceeeecCCCceeeeEEE
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNA--------ASLVDFDFDESKIV---GLIGTRICIWRRNGLRSVFPSREGTFMKGLCM 199 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~---~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 199 (422)
.-.|.+||..+-+....+..+.. ....+++.|+++++ .+-...|.+.|+...+.+-...... +..+
T Consensus 66 tDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---C~~i 142 (342)
T PF06433_consen 66 TDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---CWLI 142 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---EEEE
T ss_pred eeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---EEEE
Confidence 44789999999988887776543 12378889999876 5556889999999887653332222 2222
Q ss_pred eeeC-CeEEEecCCCeEEEEeCC-Ccceeeee----ecCCccEE-EEEec-CCCEEEEEcCCCcEEEEeCCCCccc----
Q 014590 200 RYFD-PEAVVGCEDGTARVFDMY-SRKCSQII----RMHCAPVT-SLSLS-EDQLIISGSSLGSIAISGLSSDQRL---- 267 (422)
Q Consensus 200 ~~~~-~~l~~~~~d~~i~iwd~~-~~~~~~~~----~~~~~~v~-~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~---- 267 (422)
-+.+ ..+.+-+.||.+.-..+. .|+..... .....++. .-++. .+..++-.+.+|.|+--|+......
T Consensus 143 yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~ 222 (342)
T PF06433_consen 143 YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKP 222 (342)
T ss_dssp EEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEE
T ss_pred EecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCc
Confidence 3333 348888889998888776 45543221 11122221 22233 2356666788899988887665432
Q ss_pred ---------------cceEeEEEecCCCEEEEEeC--------CC--eEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 268 ---------------TGIKTLCYNPCSRLVFAGTT--------AG--YASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 268 ---------------~~v~~~~~~~~~~~l~~g~~--------dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
+.-.-+++++..+.|++--. |+ .|.++|+.+++.+.++... ..+.+|. .+.+.
T Consensus 223 ~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~-Vsqd~ 300 (342)
T PF06433_consen 223 WSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIA-VSQDD 300 (342)
T ss_dssp EESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEE-EESSS
T ss_pred ccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEE-EccCC
Confidence 55666788876666555321 11 4888899999999988753 4578898 88877
Q ss_pred C-EEEEE-ecCCeEEEEECCCCceEEEeee
Q 014590 323 S-TLVVG-GIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 323 ~-~l~s~-~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+ +|++. ..++.+.+||..+|+.++++..
T Consensus 301 ~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 301 KPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp S-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 6 66554 4589999999999999988865
No 316
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.59 E-value=2.3e-06 Score=72.09 Aligned_cols=200 Identities=16% Similarity=0.207 Sum_probs=126.3
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCc---e----eeecCCCce-----------eeeEEEeeeCC--eEEEec
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR---S----VFPSREGTF-----------MKGLCMRYFDP--EAVVGC 210 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~---~----~~~~~~~~~-----------~~~~~~~~~~~--~l~~~~ 210 (422)
+.+..+.|...|.+++ |...|.|-++.-+... . .++.+.... +..+.+..... .++..+
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlst 106 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLST 106 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEec
Confidence 3455677888888888 6777899998765433 1 133333221 11222222222 277778
Q ss_pred CCCeEEEEeCCCcce-------------------e-----------------------eee-ecCCccEEEEEecCCCEE
Q 014590 211 EDGTARVFDMYSRKC-------------------S-----------------------QII-RMHCAPVTSLSLSEDQLI 247 (422)
Q Consensus 211 ~d~~i~iwd~~~~~~-------------------~-----------------------~~~-~~~~~~v~~l~~~~~~~l 247 (422)
.|.+|++|.+..... + +.+ ..|.--|+++.++.+...
T Consensus 107 NdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et 186 (460)
T COG5170 107 NDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKET 186 (460)
T ss_pred CCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchhe
Confidence 899999998753310 0 001 245666788999877444
Q ss_pred EEEcCCCcEEEEeCCCCccc---------------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCe------eeee-
Q 014590 248 ISGSSLGSIAISGLSSDQRL---------------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMK------SLWE- 304 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~------~~~~- 304 (422)
+..+.|-.|.+|++.-.... ..|++..|+|.. +.+.-.+..|.|++-|++... .+..
T Consensus 187 ~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~ 266 (460)
T COG5170 187 LLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFEL 266 (460)
T ss_pred eeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhh
Confidence 44456788999987643221 668888899865 455566678999999998421 1111
Q ss_pred ---------eccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC-CceEEEeeecCC
Q 014590 305 ---------TRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-GEVLSRCVMDIG 353 (422)
Q Consensus 305 ---------~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~ 353 (422)
+.+-...|..+. |+++|+++++-.. -+|++||+.. ..++.++..|..
T Consensus 267 ~~D~v~~~ff~eivsSISD~k-Fs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~ 323 (460)
T COG5170 267 TIDGVDVDFFEEIVSSISDFK-FSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCD 323 (460)
T ss_pred ccCcccchhHHHHhhhhcceE-EcCCCcEEEEecc-ceEEEEecccccCCceeechHHH
Confidence 111224677788 9999999987654 4799999975 457888876654
No 317
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.59 E-value=0.00034 Score=60.74 Aligned_cols=233 Identities=9% Similarity=0.059 Sum_probs=147.1
Q ss_pred EeeccccceeEEEec-CC-eEEEEec---CCeEEEEEcCC--CeEE--EeeeCCCce-eeEEEecCCCeEE--EecCCeE
Q 014590 107 QWKAHSVGVDQCRMK-RG-LILTGVG---DKVMRLWSLEG--YKCV--EEYSLPNAA-SLVDFDFDESKIV--GLIGTRI 174 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~-~~-~l~s~~~---dg~v~iwd~~~--~~~~--~~~~~~~~~-~~~~~~~~~~~l~--~~~~~~i 174 (422)
++-.+.+.++-+++. ++ +|.++-. +|.|..|.++. |+.. ......... ..+++++++++++ ....|.|
T Consensus 34 ~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v 113 (346)
T COG2706 34 QLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSV 113 (346)
T ss_pred hhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceE
Confidence 344567778888884 55 7777755 47777777664 5433 333333333 5699999999988 4557999
Q ss_pred EEEECCC-Cce--e--eecCCCc---------eeeeEEEeeeCCeEEEecC-CCeEEEEeCCCcceeeeee---cCCccE
Q 014590 175 CIWRRNG-LRS--V--FPSREGT---------FMKGLCMRYFDPEAVVGCE-DGTARVFDMYSRKCSQIIR---MHCAPV 236 (422)
Q Consensus 175 ~~w~~~~-~~~--~--~~~~~~~---------~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~---~~~~~v 236 (422)
.++.+.. +.. . ...+.+. -.....+.+.++++++... .-.|.+|++..|+....-. .....-
T Consensus 114 ~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GP 193 (346)
T COG2706 114 SVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGP 193 (346)
T ss_pred EEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCc
Confidence 9998865 221 1 1111111 1334556667777665543 3478999998776432211 234456
Q ss_pred EEEEecCC-CEEEE-EcCCCcEEEEeCCCC--ccc---------------cceEeEEEecCCCEEEEEeC-CCeEEEEEC
Q 014590 237 TSLSLSED-QLIIS-GSSLGSIAISGLSSD--QRL---------------TGIKTLCYNPCSRLVFAGTT-AGYASCWDL 296 (422)
Q Consensus 237 ~~l~~~~~-~~l~s-~~~dg~i~iwd~~~~--~~~---------------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~ 296 (422)
+.+.|+|+ ++... .--+++|-+|..... +.. ....++.++|||++|.++.. ...|.+|.+
T Consensus 194 RHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V 273 (346)
T COG2706 194 RHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSV 273 (346)
T ss_pred ceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEE
Confidence 89999998 44433 345889999998763 211 66778889999999998863 336778876
Q ss_pred CC--Ceee--eeeccCCCceeeeeeEecCCCEEEEEecC-CeEEEEECC
Q 014590 297 RT--MKSL--WETRISPNVVYSLQHLQNDTSTLVVGGID-GVLRVLDQN 340 (422)
Q Consensus 297 ~~--~~~~--~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-g~v~vwd~~ 340 (422)
.. +++. .....+........ +++++++|+++..+ ..|.+|...
T Consensus 274 ~~~~g~L~~~~~~~teg~~PR~F~-i~~~g~~Liaa~q~sd~i~vf~~d 321 (346)
T COG2706 274 DPDGGKLELVGITPTEGQFPRDFN-INPSGRFLIAANQKSDNITVFERD 321 (346)
T ss_pred cCCCCEEEEEEEeccCCcCCccce-eCCCCCEEEEEccCCCcEEEEEEc
Confidence 53 3322 12222333356676 88999999888864 468888664
No 318
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.55 E-value=1.2e-06 Score=83.99 Aligned_cols=164 Identities=16% Similarity=0.243 Sum_probs=115.8
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
..++.|+.-..+..+|+++.+.. +.+.-|.. +++++.+|...|+|.+-|.++.+.+.++..|.+.|..+.
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD- 224 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD- 224 (1118)
T ss_pred cceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeee-
Confidence 45666666677778888887765 34555554 788999999999999999999999999999999887755
Q ss_pred EecCCCEEEEEec---------CCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEEeeeccccCCC-
Q 014590 318 LQNDTSTLVVGGI---------DGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIERNEGRRLSAG- 377 (422)
Q Consensus 318 ~s~~~~~l~s~~~---------dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~~~~~~~~~~~- 377 (422)
-.|+.|+++|. |.-|+|||++..+.+..+..+.+.. .++..+..|.....+...+..+
T Consensus 225 --v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~ 302 (1118)
T KOG1275|consen 225 --VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP 302 (1118)
T ss_pred --ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCc
Confidence 68999999884 5568999999877766655544422 3455555665543332222222
Q ss_pred cccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEE
Q 014590 378 CCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 378 ~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~ 414 (422)
..... ...-.+.+.++++ +++.++.|..+|.|.+|.
T Consensus 303 ~~~~~-v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 303 AGVKM-VNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceeE-EccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 11111 1112234777777 689999999999999998
No 319
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.54 E-value=0.00026 Score=72.23 Aligned_cols=230 Identities=17% Similarity=0.174 Sum_probs=144.9
Q ss_pred EeeccccceeEEEe-cCC-eEEEEec---C---CeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEEEecC----Ce
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVG---D---KVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIG----TR 173 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~---d---g~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~----~~ 173 (422)
.+. +.+.-..++| -|| |+|+.+. . +.+|||+-+ |+...+-+.- .-...++|.|.|+.+++... ..
T Consensus 205 ~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~ 282 (928)
T PF04762_consen 205 KLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHD 282 (928)
T ss_pred ccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcE
Confidence 344 5666778899 467 8887764 2 589999976 6655544432 22356999999999995443 56
Q ss_pred EEEEECCCCcee-e--e-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeec-CCccEEEEEecCC--
Q 014590 174 ICIWRRNGLRSV-F--P-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRM-HCAPVTSLSLSED-- 244 (422)
Q Consensus 174 i~~w~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~-~~~~v~~l~~~~~-- 244 (422)
|.+|..++.+.- | . ...+..+..+.|+.++..|+....|. |.+|-..+.. ..+.+.. ....+..+.|+|.
T Consensus 283 VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p 361 (928)
T PF04762_consen 283 VVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKP 361 (928)
T ss_pred EEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCC
Confidence 888887775532 2 2 23455567788888888888877664 9999876654 2222221 1234455889874
Q ss_pred CEEEEEcCCCcEEEEeC----CCCcc----------------c----------------------cceEeEEEecCCCEE
Q 014590 245 QLIISGSSLGSIAISGL----SSDQR----------------L----------------------TGIKTLCYNPCSRLV 282 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~----~~~~~----------------~----------------------~~v~~~~~~~~~~~l 282 (422)
..+...+.+|.+..++. ..+.. + ..|.+++|++++..+
T Consensus 362 ~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~ 441 (928)
T PF04762_consen 362 LRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRF 441 (928)
T ss_pred CEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeE
Confidence 45666666566654432 21110 0 889999999999889
Q ss_pred EEEeCCCeEEEEECCCCee--------eeeec----------cCCCceeeeeeEecCCCEEEEEecC---CeEEEEECC
Q 014590 283 FAGTTAGYASCWDLRTMKS--------LWETR----------ISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQN 340 (422)
Q Consensus 283 ~~g~~dg~i~iwd~~~~~~--------~~~~~----------~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~ 340 (422)
++-..||.|.+|....... ...+. .....+..+. |..+...++....+ ..+.+++..
T Consensus 442 avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 519 (928)
T PF04762_consen 442 AVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLA-WLNDDTLLVLSDSDSNQSKIVLVDID 519 (928)
T ss_pred EEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEE-EeCCCEEEEEEecCcccceEEEEEec
Confidence 9999999999998543211 11111 1124466777 44444544444443 567777774
No 320
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=1.4e-05 Score=69.78 Aligned_cols=231 Identities=11% Similarity=0.094 Sum_probs=135.9
Q ss_pred EeeccccceeEEEec---CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCC
Q 014590 107 QWKAHSVGVDQCRMK---RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNG 181 (422)
Q Consensus 107 ~l~~H~~~v~~v~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~ 181 (422)
-+.+|...|..++|+ .|++..++.+.+|+|.|+++..++..+..+...-+++|.-|....+ |..+|.|.+||+..
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 456788899999994 3489999999999999999999999999998888899998877655 77889999999987
Q ss_pred CceeeecCCC--ceeeeEEEeeeCC-------eEEEecCCCeEEEEeCCC--cceeeeee-cCCccEEEEEecC--CCEE
Q 014590 182 LRSVFPSREG--TFMKGLCMRYFDP-------EAVVGCEDGTARVFDMYS--RKCSQIIR-MHCAPVTSLSLSE--DQLI 247 (422)
Q Consensus 182 ~~~~~~~~~~--~~~~~~~~~~~~~-------~l~~~~~d~~i~iwd~~~--~~~~~~~~-~~~~~v~~l~~~~--~~~l 247 (422)
.+..+....+ ....+..+.+..+ .++++... ....|+... +.....++ +..+...++..++ +..+
T Consensus 268 ~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt-~l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l 346 (463)
T KOG1645|consen 268 PEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT-VLQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLL 346 (463)
T ss_pred CCchHhhhhhhhccCcceeecccCccccccccceEEeeeh-hhhhhhhhccccCCCcccccCCCcceeeeeecCccceEE
Confidence 6643222211 1111222222221 13333332 244565432 11222121 1234445555554 2344
Q ss_pred EEEcCCCc------EE-EEeCCCCccc---------------cceEeEEEecCCCEEE-EEeCCCeEEEEECCCCeeeee
Q 014590 248 ISGSSLGS------IA-ISGLSSDQRL---------------TGIKTLCYNPCSRLVF-AGTTAGYASCWDLRTMKSLWE 304 (422)
Q Consensus 248 ~s~~~dg~------i~-iwd~~~~~~~---------------~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~ 304 (422)
++.-.+.. +- --|..+|..+ ..-..+.-.++.++++ +|...+.+.+||..+.+.+++
T Consensus 347 ~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~ 426 (463)
T KOG1645|consen 347 LTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQT 426 (463)
T ss_pred EEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhheeee
Confidence 44332110 00 0111222222 1111222234445544 445667899999999999988
Q ss_pred eccCCCceeeeeeEecCCC-EEEEEecCCeEEEEECC
Q 014590 305 TRISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 305 ~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~ 340 (422)
+... .+|..++.+.-++. +|+.- .|..++||..+
T Consensus 427 l~~~-epv~Dicp~~~n~~syLa~L-Td~~v~Iyk~e 461 (463)
T KOG1645|consen 427 LALS-EPVLDICPNDTNGSSYLALL-TDDRVHIYKNE 461 (463)
T ss_pred cccC-cceeecceeecCCcchhhhe-ecceEEEEecC
Confidence 8765 67888875555555 55554 46668888654
No 321
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=1.3e-07 Score=79.54 Aligned_cols=49 Identities=33% Similarity=0.479 Sum_probs=44.0
Q ss_pred CCCccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHH
Q 014590 19 KPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLL 67 (422)
Q Consensus 19 ~~~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 67 (422)
.+--.+.+||+||++.||+.|..++|.+++.|||+||++++|+.+|..+
T Consensus 93 npgv~~~slpDEill~IFs~L~kk~LL~~~~VC~Rfyr~~~de~lW~~l 141 (419)
T KOG2120|consen 93 NPGVSWDSLPDEILLGIFSCLCKKELLKVSGVCKRFYRLASDESLWQTL 141 (419)
T ss_pred CCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhccccccceeee
Confidence 3333578999999999999999999999999999999999999999644
No 322
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.42 E-value=0.0007 Score=58.71 Aligned_cols=194 Identities=14% Similarity=0.055 Sum_probs=125.5
Q ss_pred eeeEEEecCCC-eEE-EecCCe-EEEEECCCCcee--ee-cCCCceeeeEEEeeeCCeEEEecC-----CCeEEEEeCC-
Q 014590 154 ASLVDFDFDES-KIV-GLIGTR-ICIWRRNGLRSV--FP-SREGTFMKGLCMRYFDPEAVVGCE-----DGTARVFDMY- 221 (422)
Q Consensus 154 ~~~~~~~~~~~-~l~-~~~~~~-i~~w~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~iwd~~- 221 (422)
...++.+|... .++ +-.-|+ ..+||..+++.. +. ...-++..--+++.++..|++.-. .|.|-|||..
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 34467777444 344 555554 677898887743 22 223344444567777887776643 5889999998
Q ss_pred CcceeeeeecCCccEEEEEecCC-CEEEEEc------------------CCCcEEEEeCCCCccc-----------cceE
Q 014590 222 SRKCSQIIRMHCAPVTSLSLSED-QLIISGS------------------SLGSIAISGLSSDQRL-----------TGIK 271 (422)
Q Consensus 222 ~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~------------------~dg~i~iwd~~~~~~~-----------~~v~ 271 (422)
+-+.+..+..|.-.-..+.+.|| ..|+++. .+..+...|..+|+.+ ..|.
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR 166 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR 166 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence 55677777766555567777877 4666552 1234566677777765 5799
Q ss_pred eEEEecCCCEEEEEeCCCe-------EEEEECCCCeeeeeec-------cCCCceeeeeeEecCCCEEEEEe-cCCeEEE
Q 014590 272 TLCYNPCSRLVFAGTTAGY-------ASCWDLRTMKSLWETR-------ISPNVVYSLQHLQNDTSTLVVGG-IDGVLRV 336 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~dg~-------i~iwd~~~~~~~~~~~-------~~~~~v~~l~~~s~~~~~l~s~~-~dg~v~v 336 (422)
.+++.++|..++..-..|. |.+++.. +.+..+. .-.+.+-+|+ ++.++..+++.+ .-+.+.+
T Consensus 167 HLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~~p~~~~~~l~~Y~gSIa-~~~~g~~ia~tsPrGg~~~~ 243 (305)
T PF07433_consen 167 HLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLPAPEEQWRRLNGYIGSIA-ADRDGRLIAVTSPRGGRVAV 243 (305)
T ss_pred eEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--CcceeccCChHHHHhhCCceEEEE-EeCCCCEEEEECCCCCEEEE
Confidence 9999999887776654432 3333322 2222222 2236688998 999998775555 6789999
Q ss_pred EECCCCceEEEeee
Q 014590 337 LDQNTGEVLSRCVM 350 (422)
Q Consensus 337 wd~~~~~~~~~~~~ 350 (422)
||..+++.+.....
T Consensus 244 ~d~~tg~~~~~~~l 257 (305)
T PF07433_consen 244 WDAATGRLLGSVPL 257 (305)
T ss_pred EECCCCCEeecccc
Confidence 99999998877644
No 323
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.42 E-value=6e-06 Score=73.06 Aligned_cols=204 Identities=13% Similarity=0.097 Sum_probs=140.8
Q ss_pred cceeeEEeeccccceeEEEec-CC-eEEEEec-CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCC----eEE--EecC
Q 014590 101 GRIDIDQWKAHSVGVDQCRMK-RG-LILTGVG-DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDES----KIV--GLIG 171 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~~-~~-~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~--~~~~ 171 (422)
+.+-+..+..|.+.|.+++.+ ++ ++.|++. |..++++|+++-..+..++...-...+.|..... .++ ...+
T Consensus 42 GvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~s 121 (558)
T KOG0882|consen 42 GVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKS 121 (558)
T ss_pred ceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccC
Confidence 345667788899999999885 77 8888777 9999999998765554444433333333333222 333 4457
Q ss_pred CeEEEEECCCCc-e--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC------cceeeee---------ecCC
Q 014590 172 TRICIWRRNGLR-S--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS------RKCSQII---------RMHC 233 (422)
Q Consensus 172 ~~i~~w~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~------~~~~~~~---------~~~~ 233 (422)
+.+.++|-.... + .+....-..+....+...+..+++....|.|.-|..+. ++....+ ....
T Consensus 122 g~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~K 201 (558)
T KOG0882|consen 122 GKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAK 201 (558)
T ss_pred CCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccc
Confidence 889999876544 2 23333333444555555666688888899999998862 1111111 2233
Q ss_pred ccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc----------------------------------------cceEe
Q 014590 234 APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL----------------------------------------TGIKT 272 (422)
Q Consensus 234 ~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----------------------------------------~~v~~ 272 (422)
....++.|+|+ ..+.+-+.|..|++++..+|+.+ ..-+.
T Consensus 202 t~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~ 281 (558)
T KOG0882|consen 202 TEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTN 281 (558)
T ss_pred cCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccce
Confidence 45678999987 78888889999999999998765 33456
Q ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 273 LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 273 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
+.|...|++|+-|+-=| |++.++.++..++.+
T Consensus 282 ~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 282 AVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred eEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 77888999999998877 899999988766543
No 324
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.39 E-value=1.8e-05 Score=75.18 Aligned_cols=164 Identities=15% Similarity=0.207 Sum_probs=115.2
Q ss_pred CCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEE
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~ 240 (422)
.++.++ |+.+|.|++.+..........+... ...|.++++|+.||.|.|-.+-+.+...++. ...++.+++
T Consensus 48 ~~~~~~~GtH~g~v~~~~~~~~~~~~~~~s~~-------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksia 119 (846)
T KOG2066|consen 48 HDKFFALGTHRGAVYLTTCQGNPKTNFDHSSS-------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIA 119 (846)
T ss_pred hcceeeeccccceEEEEecCCccccccccccc-------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEE
Confidence 456666 9999999999877653211111111 4456779999999999999988887776665 356899999
Q ss_pred ecCC------CEEEEEcCCCcEEEEeCC---CCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 241 LSED------QLIISGSSLGSIAISGLS---SDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 241 ~~~~------~~l~s~~~dg~i~iwd~~---~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
++|+ +.+++|+.-| +.++.-+ ....+ ++|.++.| .|+++|=++.+| |++||+.+.+.+..+
T Consensus 120 l~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i 195 (846)
T KOG2066|consen 120 LHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNI 195 (846)
T ss_pred eccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccceeecc
Confidence 9986 5899999988 7676422 11111 89999999 688999999888 999999988877665
Q ss_pred ccCCCce------eeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 306 RISPNVV------YSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 306 ~~~~~~v------~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+.....+ ..+. |.++ ..|+.|-.| +|+|..++
T Consensus 196 ~~p~~~~R~e~fpphl~-W~~~-~~LVIGW~d-~v~i~~I~ 233 (846)
T KOG2066|consen 196 PPPSQSVRPELFPPHLH-WQDE-DRLVIGWGD-SVKICSIK 233 (846)
T ss_pred CCCCCCCCcccCCCceE-ecCC-CeEEEecCC-eEEEEEEe
Confidence 5433222 3444 5444 456656444 58888776
No 325
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.39 E-value=0.0001 Score=64.64 Aligned_cols=78 Identities=13% Similarity=0.208 Sum_probs=64.5
Q ss_pred CCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCc
Q 014590 189 REGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQ 265 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~~ 265 (422)
..+..+..++++++... +..++.+..|+|.|+++...+..+..+ ..+++.+|+- + +++..|-..|.|.+||++..+
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 34445566777777664 788999999999999999999998887 7899999984 3 799999999999999999766
Q ss_pred cc
Q 014590 266 RL 267 (422)
Q Consensus 266 ~~ 267 (422)
..
T Consensus 270 ~~ 271 (463)
T KOG1645|consen 270 GP 271 (463)
T ss_pred ch
Confidence 44
No 326
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.38 E-value=5.1e-05 Score=72.75 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=101.0
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCcc-EEEEEecCC-CEEEEEcCCCc-----EEEEeCCCCc--
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP-VTSLSLSED-QLIISGSSLGS-----IAISGLSSDQ-- 265 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~l~~~~~-~~l~s~~~dg~-----i~iwd~~~~~-- 265 (422)
.+.|++..+..++.|+.+|.|.+.+- +-+.++.++++... |..+-...+ +++++.+.|+. +++||++.-+
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 35666666777999999999988874 34555777777766 554544455 67877776654 8999986431
Q ss_pred c----c--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC----CeeeeeeccCCCceeeeeeEecCCC
Q 014590 266 R----L--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT----MKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 266 ~----~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
. + .++.+++.+.+-+.+|+|..+|.|..+.-+- +....-......+|+.++ +-.+++
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~-~~~d~~ 184 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLA-LRSDGK 184 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeE-EecCCc
Confidence 1 1 6788899999999999999999999885331 111111222357899999 777777
Q ss_pred EEEEEecCCeEEEEECCCCce
Q 014590 324 TLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~ 344 (422)
.++-......|.+|.+. |+.
T Consensus 185 s~lFv~Tt~~V~~y~l~-gr~ 204 (933)
T KOG2114|consen 185 SVLFVATTEQVMLYSLS-GRT 204 (933)
T ss_pred eeEEEEecceeEEEEec-CCC
Confidence 63333345569999987 443
No 327
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.35 E-value=0.00018 Score=68.27 Aligned_cols=87 Identities=8% Similarity=0.082 Sum_probs=64.8
Q ss_pred CCcEEEEeCCC----Cccc-------cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCee------------eeeeccC
Q 014590 253 LGSIAISGLSS----DQRL-------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKS------------LWETRIS 308 (422)
Q Consensus 253 dg~i~iwd~~~----~~~~-------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~------------~~~~~~~ 308 (422)
++.|.+.|.++ +..+ .....++++|||+++++++. +++|.|+|+.+.+. +.+....
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 35688889887 3222 77888999999999887764 88999999987553 3333333
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.++ ...+ |+++|....|-..|..|..||+..
T Consensus 375 lGP-LHTa-FDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 375 LGP-LHTA-FDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCc-ceEE-ECCCCCEEEeEeecceeEEEehHH
Confidence 333 3445 889998888888999999999875
No 328
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.34 E-value=0.00025 Score=65.71 Aligned_cols=74 Identities=16% Similarity=0.215 Sum_probs=62.2
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
..+.+++++|+...++.|+.||.|.+||...+... +....-..+.++ |+|+|..+++|+..|.+.+||+.-...
T Consensus 260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~ia-WHp~gai~~V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIA-WHPDGAIFVVGSEQGELQCFDMALSPI 333 (545)
T ss_pred CcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEE-EcCCCcEEEEEcCCceEEEEEeecCcc
Confidence 78999999999999999999999999998866333 223345567888 999999999999999999999875433
No 329
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.33 E-value=4.1e-05 Score=73.39 Aligned_cols=192 Identities=17% Similarity=0.158 Sum_probs=119.9
Q ss_pred eeEEEecCCCeEE-EecCCeEEEEECCCCc-eeeecCCCceeeeEEEeeeCCeEEEecCCC-----eEEEEeCCCc----
Q 014590 155 SLVDFDFDESKIV-GLIGTRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDG-----TARVFDMYSR---- 223 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~---- 223 (422)
..-++++.+..++ |+.+|.|.+.+-.-.. .-++......+..+........|++.+.|+ .+++||++.-
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 3456677777776 8888888887654332 223333322222222222223466666554 5899998643
Q ss_pred --ceee--eeec-----CCccEEEEEecCC-CEEEEEcCCCcEEEEeCC---C-Cccc-------cceEeEEEecCCCE-
Q 014590 224 --KCSQ--IIRM-----HCAPVTSLSLSED-QLIISGSSLGSIAISGLS---S-DQRL-------TGIKTLCYNPCSRL- 281 (422)
Q Consensus 224 --~~~~--~~~~-----~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~---~-~~~~-------~~v~~~~~~~~~~~- 281 (422)
+++. .+.. ...++.+++++.+ ..+|.|-.+|.|..+.-. . +... .+|+.+++..++..
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSV 186 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCcee
Confidence 2331 1111 2567889999877 899999999999887421 1 1111 89999999999887
Q ss_pred EEEEeCCCeEEEEECCCCee-eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 282 VFAGTTAGYASCWDLRTMKS-LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 282 l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+++++ ...|.+|.+....+ ...+..|...++|.. +++....+++++.. .+.+||.....+-.+|.
T Consensus 187 lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss-~~~~t~qfIca~~e-~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 187 LFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSS-FSDGTYQFICAGSE-FLYFYDSDGRGPCFAFE 252 (933)
T ss_pred EEEEe-cceeEEEEecCCCcceeeeccCCccceeee-cCCCCccEEEecCc-eEEEEcCCCcceeeeec
Confidence 44444 34599999884332 444677778888888 66555545555544 49999987655555665
No 330
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.32 E-value=0.001 Score=64.03 Aligned_cols=231 Identities=15% Similarity=0.134 Sum_probs=141.3
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce--eeEEEe---cCCCeEEEec------CCeEEEEECCCCceeee
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA--SLVDFD---FDESKIVGLI------GTRICIWRRNGLRSVFP 187 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~---~~~~~l~~~~------~~~i~~w~~~~~~~~~~ 187 (422)
++.++.++.++.|+.+.-.|.++|+.+..+...... ..+.-+ .++..+++.. +|.|.-+|.++++.+..
T Consensus 117 av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~ 196 (527)
T TIGR03075 117 ALYDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWR 196 (527)
T ss_pred eEECCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEe
Confidence 344567778888999999999999998776542111 111111 2454445432 68899999999887644
Q ss_pred cCCCcee--------------------------------e-eEEEeeeCCeEEEecCC----------------CeEEEE
Q 014590 188 SREGTFM--------------------------------K-GLCMRYFDPEAVVGCED----------------GTARVF 218 (422)
Q Consensus 188 ~~~~~~~--------------------------------~-~~~~~~~~~~l~~~~~d----------------~~i~iw 218 (422)
....... . ...+.+....++.+..+ ..|.-.
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAl 276 (527)
T TIGR03075 197 RYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVAR 276 (527)
T ss_pred ccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEE
Confidence 3221100 0 01122222234444311 267788
Q ss_pred eCCCcceeeeeecCCccEEE---------EEec-CC---CEEEEEcCCCcEEEEeCCCCccc---------------c--
Q 014590 219 DMYSRKCSQIIRMHCAPVTS---------LSLS-ED---QLIISGSSLGSIAISGLSSDQRL---------------T-- 268 (422)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~---------l~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~---------------~-- 268 (422)
|+++|+....++.....++. +.+. .+ ..++.+..+|.+.+.|-++|+.+ .
T Consensus 277 d~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~ 356 (527)
T TIGR03075 277 DPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLK 356 (527)
T ss_pred ccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCC
Confidence 99999998887643222222 2221 22 37788999999999999998874 0
Q ss_pred ---ce----------------------------EeEEEecCCCEEEEEeCC-----------------------------
Q 014590 269 ---GI----------------------------KTLCYNPCSRLVFAGTTA----------------------------- 288 (422)
Q Consensus 269 ---~v----------------------------~~~~~~~~~~~l~~g~~d----------------------------- 288 (422)
++ ..++++|+..++++...+
T Consensus 357 ~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ 436 (527)
T TIGR03075 357 TGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPP 436 (527)
T ss_pred CCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCC
Confidence 00 015566655555443322
Q ss_pred ----CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 289 ----GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 289 ----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
|.|.-+|+.+++...+.........+. ..-.+..++.++.||.++.+|.++|+.+..+...
T Consensus 437 ~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~--l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 437 DDHMGSLIAWDPITGKIVWEHKEDFPLWGGV--LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CCCceeEEEEeCCCCceeeEecCCCCCCCcc--eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 457778888888887765432222222 2234567778888999999999999999988664
No 331
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.28 E-value=0.00074 Score=67.60 Aligned_cols=216 Identities=11% Similarity=0.005 Sum_probs=131.5
Q ss_pred ccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEEC----CCCce
Q 014590 112 SVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRR----NGLRS 184 (422)
Q Consensus 112 ~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~----~~~~~ 184 (422)
.+.|.++.| -++ .++.+..+|.|.+-|.++....-.=....++.+++|+||+..++ .+..+++.+-+- -..+.
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 368899988 344 77777788999999988865554444566788899999999998 777787776442 11222
Q ss_pred eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-----ee------eeeecCCccEEEEEecCC-CEEEEE--
Q 014590 185 VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-----CS------QIIRMHCAPVTSLSLSED-QLIISG-- 250 (422)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----~~------~~~~~~~~~v~~l~~~~~-~~l~s~-- 250 (422)
+ ....... + ..+.++....=.-+.-..|+ .+ .....+. .=.++.|-.| +++++.
T Consensus 148 L-~~d~~~~---------s-k~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~-~~~~IsWRgDg~~fAVs~~ 215 (1265)
T KOG1920|consen 148 L-DADDERK---------S-KFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDD-HKTSISWRGDGEYFAVSFV 215 (1265)
T ss_pred c-ccccccc---------c-ccceecccccceeeecchhhhcccccccccccccchhhcc-CCceEEEccCCcEEEEEEE
Confidence 2 1000000 0 02333333211111111111 00 0011121 2246888755 677762
Q ss_pred ---cCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEe---CCCeEEEEECCCCeee----eeeccCCCcee
Q 014590 251 ---SSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGT---TAGYASCWDLRTMKSL----WETRISPNVVY 313 (422)
Q Consensus 251 ---~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~---~dg~i~iwd~~~~~~~----~~~~~~~~~v~ 313 (422)
...+.|++||-+ |..- +.-.+++|-|.|..+++-. .|+.|.+|.-+ |-.- ..+......+.
T Consensus 216 ~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~~ve 293 (1265)
T KOG1920|consen 216 ESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEKEVE 293 (1265)
T ss_pred eccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcccccchh
Confidence 333799999976 4332 5567899999999998764 45678888754 3322 22333344589
Q ss_pred eeeeEecCCCEEEE---EecCCeEEEEECCCC
Q 014590 314 SLQHLQNDTSTLVV---GGIDGVLRVLDQNTG 342 (422)
Q Consensus 314 ~l~~~s~~~~~l~s---~~~dg~v~vwd~~~~ 342 (422)
.++ |+.++..|++ ......|++|-+.+-
T Consensus 294 ~L~-Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 294 ELA-WNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred eee-ecCCCCceeeeecccccceEEEEEecCe
Confidence 999 9999998887 555566999988754
No 332
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.21 E-value=0.0035 Score=55.23 Aligned_cols=247 Identities=13% Similarity=0.042 Sum_probs=142.2
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCceee--ecCC------Cc
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVF--PSRE------GT 192 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~~~~--~~~~------~~ 192 (422)
+.+.+.|.++++.+..+...-... +.++||++.++ +. ..-.|.+||..+..... .... ..
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~~~-~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~ 95 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFLGN-VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVP 95 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESSEE-EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS-
T ss_pred ceEEEEECCCCcEEEEeecccCCc-eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecc
Confidence 479999999999988887653333 66799999876 22 12459999999875331 1111 12
Q ss_pred eeeeEEEeeeCCeEE--EecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC-CCccc--
Q 014590 193 FMKGLCMRYFDPEAV--VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS-SDQRL-- 267 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~-~~~~~-- 267 (422)
......++.+++.++ -.+-...|.|.|+..++.+..+.... ...+--.+++-|.+-+.||.+.-..+. .|+..
T Consensus 96 ~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG--C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 96 YKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG--CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp -GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS--EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred cccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC--EEEEEecCCCceEEEecCCceEEEEECCCCCEeEe
Confidence 233455566666633 33445678888888888777665321 122211234567788899999888886 44443
Q ss_pred ---------cce-EeEEEecCCCEEEEEeCCCeEEEEECCCCeee--eeeccC----------CCceeeeeeEecCCCEE
Q 014590 268 ---------TGI-KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL--WETRIS----------PNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 268 ---------~~v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~~----------~~~v~~l~~~s~~~~~l 325 (422)
.++ ..-++...+..++--+.+|.|+--|+...... ..+..- .+.-.-++ +++..+.|
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A-~~~~~~rl 252 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIA-YHAASGRL 252 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EE-EETTTTEE
T ss_pred eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeee-eccccCeE
Confidence 111 12233344455555777888888887644321 111100 01122344 55555544
Q ss_pred EEEec--------CC--eEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 326 VVGGI--------DG--VLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 326 ~s~~~--------dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
+..-. |+ .|-++|+.+++.+.++... .++.+|+
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-------------------------------------~~~~Si~ 295 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-------------------------------------HPIDSIA 295 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-------------------------------------EEESEEE
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-------------------------------------CccceEE
Confidence 44221 22 4667788888888887642 2466777
Q ss_pred e---cCEEEEEE-eCCCeEEEEEccCCC
Q 014590 396 V---GMKKVVTT-HNSKYIRLWKFNYSD 419 (422)
Q Consensus 396 ~---~~~~l~s~-s~Dg~i~iW~~~~~~ 419 (422)
. +..+|++. ..++.|.+||..+++
T Consensus 296 Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 296 VSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp EESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred EccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 7 34566554 568999999998875
No 333
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.20 E-value=0.0024 Score=53.15 Aligned_cols=185 Identities=16% Similarity=0.154 Sum_probs=117.8
Q ss_pred EEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCcc
Q 014590 158 DFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP 235 (422)
Q Consensus 158 ~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 235 (422)
.+.+|.+.++ ++..+.+.-.|..++...++..-+......++. .++.++.|...|.+++.+..+|+..+.+... +.
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~ 94 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ET 94 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeeh-hh
Confidence 3444445444 888999999999999988877766655555554 6677999999999999999999888777643 23
Q ss_pred EEE-EEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC--eeeee
Q 014590 236 VTS-LSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM--KSLWE 304 (422)
Q Consensus 236 v~~-l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~--~~~~~ 304 (422)
|.+ ....++ +.+..|+.|+..+..|.++...+ +...+-++.|-...|.++...|.+.--...++ ..++.
T Consensus 95 vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~ 174 (354)
T KOG4649|consen 95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWA 174 (354)
T ss_pred hccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCcceehh
Confidence 322 223344 89999999999999999987776 22222344453334555555666555454443 22221
Q ss_pred eccCCCceeee-eeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 305 TRISPNVVYSL-QHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 305 ~~~~~~~v~~l-~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
... .+++.+- .+ -+..+..+.-||.+.-+| ..|+.+..+.
T Consensus 175 ~~~-~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~qvwr~~ 215 (354)
T KOG4649|consen 175 ATR-FGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQVWRPA 215 (354)
T ss_pred hhc-CCccccCcee---ccceEEEEEeccEEEEEc-CCCcEEEeec
Confidence 111 1333221 11 134566667788887777 5676666553
No 334
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.15 E-value=0.00071 Score=61.32 Aligned_cols=189 Identities=13% Similarity=0.036 Sum_probs=113.8
Q ss_pred EEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC--
Q 014590 135 RLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-- 211 (422)
Q Consensus 135 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-- 211 (422)
.+|+..+...-..+.. .-.+....+||.|.+|+......|.+|.-.....+...... .+.-..+++.+++|.+=+.
T Consensus 15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~~~-~V~~~~fSP~~kYL~tw~~~p 93 (561)
T COG5354 15 VFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFRHP-DVKYLDFSPNEKYLVTWSREP 93 (561)
T ss_pred EeecCccccccccccccCcchhheeecCcchheehhhccceEEccccchhheeeeecC-CceecccCcccceeeeeccCC
Confidence 3455444444344442 23345588888888888777777888876655433222222 2234555555555554443
Q ss_pred -------------CCeEEEEeCCCcceeeeeecCCcc--EE-EEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------
Q 014590 212 -------------DGTARVFDMYSRKCSQIIRMHCAP--VT-SLSLSED-QLIISGSSLGSIAISGLSSDQRL------- 267 (422)
Q Consensus 212 -------------d~~i~iwd~~~~~~~~~~~~~~~~--v~-~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------- 267 (422)
++.+.+||+.+|..+..+.....+ .+ -+.|+-+ .+++-. ....++++++ ++...
T Consensus 94 i~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~l 171 (561)
T COG5354 94 IIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNL 171 (561)
T ss_pred ccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhc
Confidence 235899999999999988766655 44 5677743 443333 4457899996 33222
Q ss_pred --cceEeEEEecCCC--EEEE-----EeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEE
Q 014590 268 --TGIKTLCYNPCSR--LVFA-----GTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 268 --~~v~~~~~~~~~~--~l~~-----g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s 327 (422)
..+...+++|.++ .|+. +...+.+++|.+..+..+.+-..-...-..+. |.+.|++|+.
T Consensus 172 r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLk-W~~~g~~ll~ 239 (561)
T COG5354 172 RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLK-WQVLGKYLLV 239 (561)
T ss_pred cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEE-EecCCceEEE
Confidence 7788888998743 3332 34577888888876655544332222234555 7777776654
No 335
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.11 E-value=0.00036 Score=65.76 Aligned_cols=195 Identities=17% Similarity=0.212 Sum_probs=118.9
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC--CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceee
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR--EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ 227 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 227 (422)
+..+...+++..+++++ |+..|.+++|+..++....... ......+.+++.+...+|.|+..|.|.++-++.+.+..
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~ 112 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD 112 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc
Confidence 33445578888899998 9999999999999887654443 33334455666666778999999999999876643211
Q ss_pred ---e--e-ecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCC
Q 014590 228 ---I--I-RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAG 289 (422)
Q Consensus 228 ---~--~-~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg 289 (422)
. . +.|...|++++|+++ ..+++|...|+|..-.+...... +.|-.+... ++ +|++++--.
T Consensus 113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~-~LLVStl~r 190 (726)
T KOG3621|consen 113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QS-YLLVSTLTR 190 (726)
T ss_pred ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cc-eehHhhhhh
Confidence 1 1 246789999999987 89999999999998887662111 555555543 22 333333322
Q ss_pred eEEEEECCCCeeeeeecc--CCCc-eeeeeeEec---CCCEEEEEecCCeEEEEECC-CCceEEEeee
Q 014590 290 YASCWDLRTMKSLWETRI--SPNV-VYSLQHLQN---DTSTLVVGGIDGVLRVLDQN-TGEVLSRCVM 350 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~~--~~~~-v~~l~~~s~---~~~~l~s~~~dg~v~vwd~~-~~~~~~~~~~ 350 (422)
-.+++++.+. ++.+.. ..+. -...+||.. ..+-.+.++.-| .|+|... .|+.+++...
T Consensus 191 -~~Lc~tE~et-i~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG-~RlWead~~G~V~~Thqf 255 (726)
T KOG3621|consen 191 -CILCQTEAET-ITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG-LRLWEADFAGEVIKTHQF 255 (726)
T ss_pred -hheeecchhH-HHHhcCCCcCCccccceEEeeccccCCCceEEEecCC-CceEEeecceeEEEeeeh
Confidence 2345554322 111111 1111 223333322 123344444555 7889764 4777777654
No 336
>KOG2997 consensus F-box protein FBX9 [General function prediction only]
Probab=98.05 E-value=3.7e-06 Score=71.29 Aligned_cols=51 Identities=22% Similarity=0.331 Sum_probs=46.1
Q ss_pred cccccCHHHHHHHHcCC-----ChHhHHHHHhhchhHHHhccCChhHHHHHHhhcC
Q 014590 23 TIESLNGDIICMIFSSL-----GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHG 73 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l-----~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~ 73 (422)
.|.-||+|+++.||... |.++|.++++|||.|+-++.++.+|+..|.+.|.
T Consensus 106 ~~~~LPdEvLm~I~~~vv~~~~d~rsL~~~s~vCr~F~~~~R~~~lwR~aC~KvW~ 161 (366)
T KOG2997|consen 106 SISVLPDEVLMRIFRWVVSSLLDLRSLEQLSLVCRGFYKCARDPELWRLACLKVWQ 161 (366)
T ss_pred hhhhCCHHHHHHHHHHHHhhhcchhhHHHhHhhHHHHHHHHcChHHHHHHHHHHHH
Confidence 35779999999999754 8899999999999999999999999999988774
No 337
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.05 E-value=0.0015 Score=61.72 Aligned_cols=137 Identities=13% Similarity=0.078 Sum_probs=91.6
Q ss_pred eEEEecCCeEEEEecCCeEEEEEcCCCeEEEeee-CCCce-eeEEEecCCCeEE-EecCCeEEEEECCCCc---ee--ee
Q 014590 116 DQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYS-LPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLR---SV--FP 187 (422)
Q Consensus 116 ~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~---~~--~~ 187 (422)
+|+...+.+++.|+.-|.+.+++-.+++....-. +.+.. .+..++++..+++ |+..|.|.++-+.... .. ..
T Consensus 39 Tc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~ 118 (726)
T KOG3621|consen 39 TCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTP 118 (726)
T ss_pred EEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecc
Confidence 4455456699999999999999988776544333 23333 4477888888887 8888999999776533 11 22
Q ss_pred cCC--CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc----eeeeeecCCccEEEEEecCCCEEEEEcC
Q 014590 188 SRE--GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLSEDQLIISGSS 252 (422)
Q Consensus 188 ~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~~~l~s~~~ 252 (422)
.+. +..+..++|+.++..+++|...|.|.+-.+.+.. ..+.+....+.|..+.......+++...
T Consensus 119 ~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~ 189 (726)
T KOG3621|consen 119 CDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLT 189 (726)
T ss_pred ccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhh
Confidence 223 4456677777788889999999999988876621 1223333456677777655555554443
No 338
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.99 E-value=0.00083 Score=63.87 Aligned_cols=193 Identities=10% Similarity=-0.003 Sum_probs=121.7
Q ss_pred cCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEec-----CCeEEEEECCCCceeeecCCCceeeeEEEeeeCC
Q 014590 130 GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLI-----GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDP 204 (422)
Q Consensus 130 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (422)
..+.+.+.|.++.+....+........++++++|++++.+. ..++...+......+....... .-.+..+++
T Consensus 213 y~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~---iea~vkdGK 289 (635)
T PRK02888 213 YRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIAR---IEEAVKAGK 289 (635)
T ss_pred eeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHH---HHHhhhCCC
Confidence 35678888999988888888777677799999999988332 2334444332222111000000 001122344
Q ss_pred eEEEecCCCeEEEEeCCC-----cceeeeeecCCccEEEEEecCC-CE-EEEEcCCCcEEEEeCCCCccc----------
Q 014590 205 EAVVGCEDGTARVFDMYS-----RKCSQIIRMHCAPVTSLSLSED-QL-IISGSSLGSIAISGLSSDQRL---------- 267 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~v~~l~~~~~-~~-l~s~~~dg~i~iwd~~~~~~~---------- 267 (422)
.... .++.|.+.|..+ .+.+..+.. ......+.++|| ++ ++++..+.++.+.|+.+.+..
T Consensus 290 ~~~V--~gn~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~ 366 (635)
T PRK02888 290 FKTI--GGSKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDA 366 (635)
T ss_pred EEEE--CCCEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccce
Confidence 4333 357899999987 345555543 345678999998 54 555566899999999886631
Q ss_pred --------cceEeEEEecCCCEEEEEeCCCeEEEEECCC----------CeeeeeeccCCCce-----eeeeeEecCCCE
Q 014590 268 --------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT----------MKSLWETRISPNVV-----YSLQHLQNDTST 324 (422)
Q Consensus 268 --------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~l~~~s~~~~~ 324 (422)
......+|.++|+...+-.-|..|..||+.+ ...+.++..|-.+- .+=. -.|+|++
T Consensus 367 vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t-~~~dgk~ 445 (635)
T PRK02888 367 VVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGET-KEADGKW 445 (635)
T ss_pred EEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCc-CCCCCCE
Confidence 5566789999998888888899999999875 23333343332211 1111 3578888
Q ss_pred EEEEe
Q 014590 325 LVVGG 329 (422)
Q Consensus 325 l~s~~ 329 (422)
|++..
T Consensus 446 l~~~n 450 (635)
T PRK02888 446 LVSLN 450 (635)
T ss_pred EEEcc
Confidence 88765
No 339
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.96 E-value=0.011 Score=52.09 Aligned_cols=217 Identities=10% Similarity=0.081 Sum_probs=122.9
Q ss_pred CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeec-------------
Q 014590 122 RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS------------- 188 (422)
Q Consensus 122 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~------------- 188 (422)
+..|+.|..+| +.+++...............+.-+...++-+.++.-.|+.+.++++.........
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~ 85 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPT 85 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccccc
Confidence 44888898888 8999983333323332222366688888888888777799999998764432210
Q ss_pred CCCceeeeEEEe----eeCCeEEEecCCCeEEEEeCCCc-----ceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEE
Q 014590 189 REGTFMKGLCMR----YFDPEAVVGCEDGTARVFDMYSR-----KCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAIS 259 (422)
Q Consensus 189 ~~~~~~~~~~~~----~~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iw 259 (422)
.......+..+. ..+...+.....+.|.+|..... +..+.+.. ...+.+++|.+ +.++.|.. +...+.
T Consensus 86 ~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~~-~~i~v~~~-~~f~~i 162 (275)
T PF00780_consen 86 KLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFLG-NKICVGTS-KGFYLI 162 (275)
T ss_pred cccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEeC-CEEEEEeC-CceEEE
Confidence 111111122222 11222333444458888877543 34444443 46788899874 45555554 447788
Q ss_pred eCCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee--eeccCCCceeeeeeE
Q 014590 260 GLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW--ETRISPNVVYSLQHL 318 (422)
Q Consensus 260 d~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~ 318 (422)
|+.++... .++..+.. +++.+|++- |..-...|. .|++.+ .+.- ...+.+++ +
T Consensus 163 dl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~W-~~~p~~~~-~ 236 (275)
T PF00780_consen 163 DLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQW-SSAPQSVA-Y 236 (275)
T ss_pred ecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccEEEc-CCchhEEE-E
Confidence 88765543 12223333 345555543 222233343 354433 2221 23455665 3
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
...+|+..+.+ .|.||++.+++.++.+...
T Consensus 237 --~~pyli~~~~~-~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 237 --SSPYLIAFSSN-SIEVRSLETGELVQTIPLP 266 (275)
T ss_pred --ECCEEEEECCC-EEEEEECcCCcEEEEEECC
Confidence 34577776664 4999999999999998753
No 340
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.95 E-value=7.7e-05 Score=68.92 Aligned_cols=68 Identities=18% Similarity=0.265 Sum_probs=60.1
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
.....|.+.+++|+ ..++.|+.||+|.+||...+... -.++.++|+|+|..+++|+..|.+.+||+.-
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 35678899999987 89999999999999998776544 6778899999999999999999999999874
No 341
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.89 E-value=0.016 Score=54.26 Aligned_cols=135 Identities=10% Similarity=0.052 Sum_probs=76.1
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH 232 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 232 (422)
.+..+.++|+|+.++.+.+|...++.....+....+... ..+|.. .+.+++-..+++|.++.--+.+..+.++..
T Consensus 34 ~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~~G~g~----~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~ 108 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKAFGSGL----SFVWSS-RNRYAVLESSSTIKIYKNFKNEVVKSIKLP 108 (443)
T ss_dssp --SEEEE-TTSSEEEEEETTEEEEEETTTTEEEEEEE-S----EEEE-T-SSEEEEE-TTS-EEEEETTEE-TT-----S
T ss_pred CCeeEEECCCCCEEEEEcCCEEEEEEccCCcccccCcee----EEEEec-CccEEEEECCCeEEEEEcCccccceEEcCC
Confidence 356799999999999999999999985544433222111 233444 444777776888888643233333333321
Q ss_pred CccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 233 CAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 233 ~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
..+..+- ++..+...+. +.|.+||..+++.+ ..|..+.|+++|.+++..+.+. +.+++..
T Consensus 109 -~~~~~If--~G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~~-i~il~~~ 173 (443)
T PF04053_consen 109 -FSVEKIF--GGNLLGVKSS-DFICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKDS-IYILKYN 173 (443)
T ss_dssp -S-EEEEE---SSSEEEEET-TEEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S-S-EEEEEE-
T ss_pred -cccceEE--cCcEEEEECC-CCEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCCe-EEEEEec
Confidence 1233332 3666666554 48999999999887 4579999999999999998765 7777654
No 342
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.88 E-value=0.012 Score=50.08 Aligned_cols=171 Identities=12% Similarity=0.049 Sum_probs=109.2
Q ss_pred ceeEEEe-cCC-eEEEEecCC--eEEEEEcCCCeEEEeeeCCCceee--EEEecCCCeEEEecCCeEEEEECCCCceeee
Q 014590 114 GVDQCRM-KRG-LILTGVGDK--VMRLWSLEGYKCVEEYSLPNAASL--VDFDFDESKIVGLIGTRICIWRRNGLRSVFP 187 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~ 187 (422)
-...+.| .+| ++-|.+.-| .|+.+|+.+|+.......+..... ++...|.-+.+.-.++...+||.++.+.+-.
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~ 125 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGT 125 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEE
Confidence 3455888 777 666766666 799999999999888877665443 4444332222388899999999998775522
Q ss_pred cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC-----CccEEEEEecCCCEEEEEcCCCcEEEEeCC
Q 014590 188 SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH-----CAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~ 262 (422)
..-.. ....+..++..|+.......++++|..+-+....+... -..++-+.+..+...+-.-....|...|..
T Consensus 126 ~~y~~--EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~ 203 (264)
T PF05096_consen 126 FPYPG--EGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRIDPE 203 (264)
T ss_dssp EE-SS--S--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEEETT
T ss_pred EecCC--cceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCC
Confidence 22111 24555577777888877889999999887766665422 224566777666666666666777788888
Q ss_pred CCccc----------------------cceEeEEEecCCCEEEEEe
Q 014590 263 SDQRL----------------------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 263 ~~~~~----------------------~~v~~~~~~~~~~~l~~g~ 286 (422)
+|+.. .-.+.+|++|..+.+.+.+
T Consensus 204 tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 204 TGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp T-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 87765 3478899988776665554
No 343
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.87 E-value=0.015 Score=54.18 Aligned_cols=170 Identities=14% Similarity=0.135 Sum_probs=85.8
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeee-------eecCCccEEEEEecCC
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQI-------IRMHCAPVTSLSLSED 244 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~-------~~~~~~~v~~l~~~~~ 244 (422)
.|.+|+..+.......-.. ..++++.+.. ..|+....||.++++|+. |+.... .......+....+..+
T Consensus 62 ~I~iys~sG~ll~~i~w~~--~~iv~~~wt~~e~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~ 138 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDS--GRIVGMGWTDDEELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKN 138 (410)
T ss_pred EEEEECCCCCEeEEEEECC--CCEEEEEECCCCeEEEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCCC
Confidence 3666666555421111111 2244555443 348888899999999985 443111 1111112222222223
Q ss_pred CEEEEEcCCCcEEEEe-CCCCcc------c----------cceEe-EEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 245 QLIISGSSLGSIAISG-LSSDQR------L----------TGIKT-LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd-~~~~~~------~----------~~v~~-~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
+.++.. .++.+.+.+ ...... + ..... ..++.+....+....++.+.+.+-...+. +.
T Consensus 139 GivvLt-~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~ 214 (410)
T PF04841_consen 139 GIVVLT-GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID 214 (410)
T ss_pred CEEEEC-CCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc
Confidence 433332 334443332 221100 0 00000 22334444444444555555444332211 21
Q ss_pred cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 307 ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 307 ~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
..+++..++ +||++++||.-..+|.+.|.+..-.+.+..+...
T Consensus 215 -~~~~i~~ia-vSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~ 257 (410)
T PF04841_consen 215 -SDGPIIKIA-VSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD 257 (410)
T ss_pred -CCCCeEEEE-ECCCCCEEEEEECCCCEEEEECcccceeEEeecC
Confidence 236799999 9999999999999999999887655666555544
No 344
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.87 E-value=0.0083 Score=59.98 Aligned_cols=228 Identities=14% Similarity=0.053 Sum_probs=124.9
Q ss_pred cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCcee---------eEEEec----------------CCCeEE-EecCCeE
Q 014590 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS---------LVDFDF----------------DESKIV-GLIGTRI 174 (422)
Q Consensus 121 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~---------~~~~~~----------------~~~~l~-~~~~~~i 174 (422)
-++.|+.++.++.|.-.|..+|+.+..+....... -+++.. .+..++ ++.|+.+
T Consensus 193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L 272 (764)
T TIGR03074 193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL 272 (764)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence 36788888889999999999999998887532211 122211 223444 8889999
Q ss_pred EEEECCCCceeeecCC-Ccee--------------eeEEEeeeCCeEEEecC----------CCeEEEEeCCCcceeeee
Q 014590 175 CIWRRNGLRSVFPSRE-GTFM--------------KGLCMRYFDPEAVVGCE----------DGTARVFDMYSRKCSQII 229 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~-~~~~--------------~~~~~~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~ 229 (422)
.-.|.++++.+..... +.+. ....-...+..+++|+. +|.|+-+|.++|+.+..+
T Consensus 273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 273 IALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 9999999886643221 1110 00011112344666643 688999999999998887
Q ss_pred ecCCccEEEEEecCCCEEEEEcCCC-cEEEEeCCCCccc--cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 230 RMHCAPVTSLSLSEDQLIISGSSLG-SIAISGLSSDQRL--TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~~~l~s~~~dg-~i~iwd~~~~~~~--~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
..-. +...-...+++....++.+. ...-+|.+.+... ..-.+..+....+........+.|.-.|.++|+....++
T Consensus 353 ~~g~-p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q 431 (764)
T TIGR03074 353 DPGN-PDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ 431 (764)
T ss_pred ecCC-CCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence 5211 11000011222222122111 2233343333222 000001110011101111235568888999999988876
Q ss_pred cCCCceee---------eeeEec-CCC---EEEEEecCCeEEEEECCCCceEEEeee
Q 014590 307 ISPNVVYS---------LQHLQN-DTS---TLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 307 ~~~~~v~~---------l~~~s~-~~~---~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.....++. +. +.. +|+ .++.++.+|.+++.|.++|+.+...+.
T Consensus 432 ~~~hD~WD~D~~~~p~L~d-~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e 487 (764)
T TIGR03074 432 TVHHDLWDMDVPAQPSLVD-LPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE 487 (764)
T ss_pred ccCCccccccccCCceEEe-eecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence 52211111 11 222 553 789999999999999999998876543
No 345
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.86 E-value=0.0016 Score=47.19 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=65.0
Q ss_pred eeEEEe---c-CC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeec
Q 014590 115 VDQCRM---K-RG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 115 v~~v~~---~-~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~ 188 (422)
|+++++ . || .|+.|+.|..||+|+-+ +.+.++...+.+..+.-...+.+.++..+|+|-+|+-.... +..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~Rl--WRi 77 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDRSQRL--WRI 77 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeCccee--eee
Confidence 667766 2 34 89999999999999854 78888888877877777666665559999999998764332 222
Q ss_pred CCCce-eeeEEEeeeC---CeEEEecCCCeEE
Q 014590 189 REGTF-MKGLCMRYFD---PEAVVGCEDGTAR 216 (422)
Q Consensus 189 ~~~~~-~~~~~~~~~~---~~l~~~~~d~~i~ 216 (422)
...+. .....+..++ +.|++|-.+|.|-
T Consensus 78 KSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 78 KSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 22222 2222222222 1388888888774
No 346
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.82 E-value=0.0013 Score=63.39 Aligned_cols=187 Identities=13% Similarity=0.137 Sum_probs=108.5
Q ss_pred eeEEEecCCCeEE-Ee----cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee
Q 014590 155 SLVDFDFDESKIV-GL----IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~~----~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
.+.+|+|....++ ++ ..|.|.||--.+....-...+-+. ..+||.+..-.|+.|-.-|.+.+|...+.+.-...
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~ha-tSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~ 97 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHA-TSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVV 97 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEecCCCCCcccccceeh-hhhccChHHHHHhhccccceeEEEecCCceeeeec
Confidence 4467777777766 33 357888874332211111111111 23555554445889999999999998777665556
Q ss_pred ecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-----------cceE--eEEEecCCC------EEEEEeCCC
Q 014590 230 RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-----------TGIK--TLCYNPCSR------LVFAGTTAG 289 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~--~~~~~~~~~------~l~~g~~dg 289 (422)
..|..+|..+.|+++ +.++++..-|.+.+|....-..+ ..++ |..+++++. ..++.+.+.
T Consensus 98 ~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~ 177 (1416)
T KOG3617|consen 98 ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDES 177 (1416)
T ss_pred cCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchh
Confidence 779999999999976 89999999999999987532222 3333 333445532 223333333
Q ss_pred eEE-EEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 290 YAS-CWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 290 ~i~-iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
.+- .++.+.....+.. .|. -.|+|..++.++.+|+|+--|- .|++....+..+
T Consensus 178 alD~~fnwk~~~a~rs~-~ks--------gv~~g~~F~~~~~~GtVyyvdq-~g~~~~V~k~dS 231 (1416)
T KOG3617|consen 178 ALDEPFNWKESLAERSD-EKS--------GVPKGTEFLFAGKSGTVYYVDQ-NGRQRTVHKLDS 231 (1416)
T ss_pred hhcccccCccchhhccc-ccc--------CCCCCcEEEEEcCCceEEEEcC-CCcEEEEEEccc
Confidence 332 2222211000000 011 2367777778888888887774 355555444433
No 347
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.80 E-value=0.0083 Score=54.25 Aligned_cols=203 Identities=16% Similarity=0.215 Sum_probs=117.8
Q ss_pred CeEEEEEcCCCeEEEeeeCCCce--eeE---EEecC----CCeEE-Eec---------C-CeEEEEECCCC-----ceee
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAA--SLV---DFDFD----ESKIV-GLI---------G-TRICIWRRNGL-----RSVF 186 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~--~~~---~~~~~----~~~l~-~~~---------~-~~i~~w~~~~~-----~~~~ 186 (422)
..|++.|..+.+.+..+...... .++ .+..+ ..+++ |+. . |.|.++++... +...
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 36888888888777776654333 322 22222 24444 432 2 88999999884 2111
Q ss_pred ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-eeeeeec-CCccEEEEEecCCCEEEEEcCCCcEEEEeCCC-
Q 014590 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-CSQIIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSS- 263 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~-~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~- 263 (422)
.........+.++..+++.++++. ++.|.+|++...+ ....-.. ....+.++... +++++.|..-..+.++....
T Consensus 82 i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~-~~~I~vgD~~~sv~~~~~~~~ 159 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF-KNYILVGDAMKSVSLLRYDEE 159 (321)
T ss_dssp EEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE-TTEEEEEESSSSEEEEEEETT
T ss_pred EEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc-ccEEEEEEcccCEEEEEEEcc
Confidence 111111223667777777755555 5799999998777 3332221 23366666664 45888898888888775443
Q ss_pred Cc-cc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCC-------Ce--e--eeeeccCCCceeeeee--Eec-
Q 014590 264 DQ-RL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT-------MK--S--LWETRISPNVVYSLQH--LQN- 320 (422)
Q Consensus 264 ~~-~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-------~~--~--~~~~~~~~~~v~~l~~--~s~- 320 (422)
+. .. ..++++.+-++++.++++..+|.+.++.... +. . ...+.. ...|+++.- +.|
T Consensus 160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~l-g~~v~~~~~~~l~~~ 238 (321)
T PF03178_consen 160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHL-GDIVNSFRRGSLIPR 238 (321)
T ss_dssp TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--
T ss_pred CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEEC-CCccceEEEEEeeec
Confidence 22 22 6688888887778999999999999987762 11 1 222222 245666621 223
Q ss_pred -CCC------EEEEEecCCeEEEE
Q 014590 321 -DTS------TLVVGGIDGVLRVL 337 (422)
Q Consensus 321 -~~~------~l~s~~~dg~v~vw 337 (422)
.+. .++.++.+|.|.+.
T Consensus 239 ~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 239 SGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred CCCCcccccceEEEEecCCEEEEE
Confidence 121 47777788888743
No 348
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=97.80 E-value=0.013 Score=59.25 Aligned_cols=178 Identities=7% Similarity=-0.095 Sum_probs=104.8
Q ss_pred ceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec
Q 014590 153 AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM 231 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 231 (422)
.+..+.|..++..++ +...|.|.+-|.++......+.-...+...+|+++...++..+..+++.+-+- +-.++....-
T Consensus 70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~i~E~~L 148 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEPIAEKPL 148 (1265)
T ss_pred ceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccchhcccc
Confidence 345567777777776 99999999999988876655555556678888888888777777777765432 2222221111
Q ss_pred CCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-----------------cceEeEEEecCCCEEEEEe-----CCC
Q 014590 232 HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-----------------TGIKTLCYNPCSRLVFAGT-----TAG 289 (422)
Q Consensus 232 ~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------------~~v~~~~~~~~~~~l~~g~-----~dg 289 (422)
+. .-.+.+.++.++....=.-+.-..|+.. ..=+++.|--||.++|+.. ...
T Consensus 149 ~~------d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R 222 (1265)
T KOG1920|consen 149 DA------DDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR 222 (1265)
T ss_pred cc------ccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence 10 0001122333332221111111111000 4455789999999999843 237
Q ss_pred eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe---cCCeEEEEEC
Q 014590 290 YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG---IDGVLRVLDQ 339 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~---~dg~v~vwd~ 339 (422)
+|++||.+ |.+-..-....+.-.+++ |-|.|..+++-. .|+.|.+|.-
T Consensus 223 kirV~drE-g~Lns~se~~~~l~~~Ls-WkPsgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 223 KIRVYDRE-GALNSTSEPVEGLQHSLS-WKPSGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred eEEEeccc-chhhcccCccccccccee-ecCCCCeEeeeeecCCCCcEEEEec
Confidence 89999977 433222222233345677 889999888754 4567888874
No 349
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.75 E-value=0.0038 Score=45.19 Aligned_cols=84 Identities=18% Similarity=0.172 Sum_probs=60.1
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----cceEeEEEec---C
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----TGIKTLCYNP---C 278 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~~v~~~~~~~---~ 278 (422)
|++|+.|..|++|+- .+.+..+.. .+.|.+++-.....|+.+..+|+|-+|+-....-. ..+.++++.. |
T Consensus 18 LlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~RlWRiKSK~~~~~~~~~D~~gd 94 (111)
T PF14783_consen 18 LLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDRSQRLWRIKSKNQVTSMAFYDINGD 94 (111)
T ss_pred EEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeCcceeeeeccCCCeEEEEEEcCCCC
Confidence 999999999999984 466666664 46778888777788999999999988765322211 4566665543 2
Q ss_pred C-CEEEEEeCCCeEE
Q 014590 279 S-RLVFAGTTAGYAS 292 (422)
Q Consensus 279 ~-~~l~~g~~dg~i~ 292 (422)
| .-|++|-.+|.|-
T Consensus 95 G~~eLI~GwsnGkve 109 (111)
T PF14783_consen 95 GVPELIVGWSNGKVE 109 (111)
T ss_pred CceEEEEEecCCeEE
Confidence 2 3688888888764
No 350
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.74 E-value=1.1e-05 Score=74.71 Aligned_cols=131 Identities=21% Similarity=0.319 Sum_probs=94.7
Q ss_pred EEEecCCCeEEEEeCCCcce--eeeeecCCccEEEEEecC-C-CEEEEEc----CCCcEEEEeCCCCccc----------
Q 014590 206 AVVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSE-D-QLIISGS----SLGSIAISGLSSDQRL---------- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~-~-~~l~s~~----~dg~i~iwd~~~~~~~---------- 267 (422)
+++|..+|.|-+-..+...- -....++..+.++++|++ | +.+++|- .|..+.+||+.++-..
T Consensus 73 lavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~ 152 (783)
T KOG1008|consen 73 LAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSS 152 (783)
T ss_pred hhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccc
Confidence 88899999999987764432 234466778899999986 4 6777773 4678999999877222
Q ss_pred --cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec-CCCEEEEEecCCeEEEEEC
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN-DTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~-~~~~l~s~~~dg~v~vwd~ 339 (422)
....+++|..+.+.+.+|.....+.++|++... ...-...+..+..+. .+| .+.++++.. ||.|-+||.
T Consensus 153 ~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-~~~~svnTk~vqG~t-Vdp~~~nY~cs~~-dg~iAiwD~ 224 (783)
T KOG1008|consen 153 TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-DSVSSVNTKYVQGIT-VDPFSPNYFCSNS-DGDIAIWDT 224 (783)
T ss_pred cccCccccccccCcchhhcccccchhhhhhhhhhh-hhhhhhhhhhcccce-ecCCCCCceeccc-cCceeeccc
Confidence 556688888889999999999999999998321 111111223455565 677 677887766 999999993
No 351
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.73 E-value=0.038 Score=51.16 Aligned_cols=219 Identities=13% Similarity=0.106 Sum_probs=147.3
Q ss_pred eEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEe
Q 014590 133 VMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVG 209 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (422)
.+..-+............. .....+++++++..+. ...++.|.+.|..+.........+.....+.+.+.++.++.+
T Consensus 54 ~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~ 133 (381)
T COG3391 54 DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVA 133 (381)
T ss_pred eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEE
Confidence 5555554422222222222 2334578888888665 444799999998777655444444455577788888775555
Q ss_pred cC---CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-C-EEEEEcCCCcEEEEeCCCCccc-----------cceEeE
Q 014590 210 CE---DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSDQRL-----------TGIKTL 273 (422)
Q Consensus 210 ~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~ 273 (422)
.. ++++.+.|..+++.+.....-..+ ..++++|+ + ..++-..++.|.+.|....... .....+
T Consensus 134 n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i 212 (381)
T COG3391 134 NAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGI 212 (381)
T ss_pred ecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceE
Confidence 44 689999999988887775543345 78899987 5 3444457899999997654221 555678
Q ss_pred EEecCCCEEEEEeCC---CeEEEEECCCCeeeee-eccCCCceeeeeeEecCCCEEEEEec-CCeEEEEECCCCceEEEe
Q 014590 274 CYNPCSRLVFAGTTA---GYASCWDLRTMKSLWE-TRISPNVVYSLQHLQNDTSTLVVGGI-DGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 274 ~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~ 348 (422)
.++|+|.++.+.... +.+...|..++..... ..........+. .+|+|+.+.+... .+.+.+-|..+......+
T Consensus 213 ~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~-~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~ 291 (381)
T COG3391 213 AVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVA-VDPAGKAAYVANSQGGTVSVIDGATDRVVKTG 291 (381)
T ss_pred EECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCcee-ECCCCCEEEEEecCCCeEEEEeCCCCceeeee
Confidence 899999977766544 5899999998776654 222221345566 8899998887744 488999999887777766
Q ss_pred eecCC
Q 014590 349 VMDIG 353 (422)
Q Consensus 349 ~~~~~ 353 (422)
.....
T Consensus 292 ~~~~~ 296 (381)
T COG3391 292 PTGNE 296 (381)
T ss_pred ccccc
Confidence 54433
No 352
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.72 E-value=0.006 Score=60.41 Aligned_cols=136 Identities=17% Similarity=0.245 Sum_probs=92.7
Q ss_pred EEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCC--------CeEEEecCCeEEEEECCCCc-eeeecCC---Cc
Q 014590 125 ILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE--------SKIVGLIGTRICIWRRNGLR-SVFPSRE---GT 192 (422)
Q Consensus 125 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~i~~w~~~~~~-~~~~~~~---~~ 192 (422)
|........+.-.|++.|+.+..+..+....+..+.|+. ..++|-.++.+..||.+-.. .+..... ..
T Consensus 497 l~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~ 576 (794)
T PF08553_consen 497 LLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSS 576 (794)
T ss_pred eecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccccc
Confidence 333445678888999999999999998777677777753 34679999999999987532 2221111 11
Q ss_pred eeeeEEEeee-CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeC
Q 014590 193 FMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (422)
Q Consensus 193 ~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~ 261 (422)
.....|+... ...+|+|+.+|.||+||--..+....+++-..+|..|+.+.| ++++ |..+..+.+++.
T Consensus 577 ~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwil-aTc~tyLlLi~t 646 (794)
T PF08553_consen 577 KNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWIL-ATCKTYLLLIDT 646 (794)
T ss_pred CCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEE-EeecceEEEEEE
Confidence 1123344333 345999999999999995333334445677899999999976 5544 445667778775
No 353
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=0.00025 Score=65.91 Aligned_cols=79 Identities=30% Similarity=0.373 Sum_probs=70.8
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCcee-eeeeEecCCCEEEEEecCCeEEEEECCCCceEE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVY-SLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 346 (422)
..+.-+.|+|.-..+|.+..+|.|.+..+. .+.++++..|...++ +++ |.|||+.||.|-.||+|++.|+.++..+.
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~-W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLC-WRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeee-ecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 567788999999999999999999999988 788889887776666 998 99999999999999999999999998877
Q ss_pred Ee
Q 014590 347 RC 348 (422)
Q Consensus 347 ~~ 348 (422)
.+
T Consensus 99 ~~ 100 (665)
T KOG4640|consen 99 SF 100 (665)
T ss_pred cc
Confidence 74
No 354
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.71 E-value=1.6e-05 Score=73.59 Aligned_cols=184 Identities=15% Similarity=0.184 Sum_probs=117.4
Q ss_pred ccceeEEEec---CC-eEEEEecCCeEEEEEcCCCeEE-EeeeCC--CceeeEEEec-CCCeEEEec-----CCeEEEEE
Q 014590 112 SVGVDQCRMK---RG-LILTGVGDKVMRLWSLEGYKCV-EEYSLP--NAASLVDFDF-DESKIVGLI-----GTRICIWR 178 (422)
Q Consensus 112 ~~~v~~v~~~---~~-~l~s~~~dg~v~iwd~~~~~~~-~~~~~~--~~~~~~~~~~-~~~~l~~~~-----~~~i~~w~ 178 (422)
...+.|++.. +. .++.|..+|.|-+-......-- +++..+ .....++|++ |.+.|+++. +..+.+||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 4456777662 33 8888999999988876543221 222222 2345577777 556666443 56799999
Q ss_pred CCCCc------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEE
Q 014590 179 RNGLR------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISG 250 (422)
Q Consensus 179 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~ 250 (422)
+.+.- ..+..........+|+..+.+.+.+|...+.++++|++... .......+..+..+.+.| . +++++-
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-~~~~svnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-DSVSSVNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred cccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh-hhhhhhhhhhcccceecCCCCCceecc
Confidence 98762 22333223333467777777889999999999999987332 111122344566777777 3 677665
Q ss_pred cCCCcEEEEe-CCCCccc------------cceEeEEEecCCC-EEEEE-eCCCeEEEEECC
Q 014590 251 SSLGSIAISG-LSSDQRL------------TGIKTLCYNPCSR-LVFAG-TTAGYASCWDLR 297 (422)
Q Consensus 251 ~~dg~i~iwd-~~~~~~~------------~~v~~~~~~~~~~-~l~~g-~~dg~i~iwd~~ 297 (422)
. ||.|.+|| .++-+.. ..+..++|.|... .+++. -..++|+++|+.
T Consensus 215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 4 99999999 4333222 4588999998643 33333 356789999986
No 355
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.69 E-value=0.026 Score=49.72 Aligned_cols=139 Identities=22% Similarity=0.300 Sum_probs=85.9
Q ss_pred eeeCCeEEEecCCCeEEEEeCCC-cceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc----------
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------- 267 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------- 267 (422)
...++.|+.|+.+| +.+++... ........ ..+|..+...|+ +.+++- .|+.+.++++......
T Consensus 4 ~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 4 DSWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred ccCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEE-cCCccEEEEchhhccccccccccccc
Confidence 34556689998888 89999832 33333322 334999999887 655554 3599999997643222
Q ss_pred -----------cceEeEE--EecCC-CEEEEEeCCCeEEEEECCCC-----eeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 268 -----------TGIKTLC--YNPCS-RLVFAGTTAGYASCWDLRTM-----KSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 -----------~~v~~~~--~~~~~-~~l~~g~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
..+...+ -.+.+ ..++++. ..+|.+|..... +...++... ..+.+++ |. ++.++.|
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~lp-~~~~~i~-~~--~~~i~v~ 154 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEISLP-DPPSSIA-FL--GNKICVG 154 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEEcC-CCcEEEE-Ee--CCEEEEE
Confidence 2333333 11233 3444444 457888877642 344555443 6788888 54 5677777
Q ss_pred ecCCeEEEEECCCCceEEEe
Q 014590 329 GIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~~~~~ 348 (422)
..++ ..+.|+.++.....+
T Consensus 155 ~~~~-f~~idl~~~~~~~l~ 173 (275)
T PF00780_consen 155 TSKG-FYLIDLNTGSPSELL 173 (275)
T ss_pred eCCc-eEEEecCCCCceEEe
Confidence 7655 888999877664443
No 356
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.66 E-value=0.022 Score=52.49 Aligned_cols=118 Identities=16% Similarity=0.211 Sum_probs=68.3
Q ss_pred ecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc---------------cceEeEEEec-----CC---CEEEEEe
Q 014590 230 RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL---------------TGIKTLCYNP-----CS---RLVFAGT 286 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~-----~~---~~l~~g~ 286 (422)
+...++|++++.++=.+++.|..+|.+.+.|+|....+ ..++++.|+. |+ -.+++|+
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT 162 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT 162 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence 34578999999975599999999999999999876655 4677888762 33 4789999
Q ss_pred CCCeEEEEECCC---Ce----eeeeeccCCCceeeeeeEecC---------------------CCEEEEEecCCeEEEEE
Q 014590 287 TAGYASCWDLRT---MK----SLWETRISPNVVYSLQHLQND---------------------TSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 287 ~dg~i~iwd~~~---~~----~~~~~~~~~~~v~~l~~~s~~---------------------~~~l~s~~~dg~v~vwd 338 (422)
..|.+.+|.+.- +. .......+.+.|..+..++.+ ..+++. ..+..++++.
T Consensus 163 n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv-vSe~~irv~~ 241 (395)
T PF08596_consen 163 NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV-VSESDIRVFK 241 (395)
T ss_dssp TTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE-E-SSEEEEE-
T ss_pred CCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE-EcccceEEEe
Confidence 999999997751 11 111122455666666544322 113333 3456688888
Q ss_pred CCCCceEEEe
Q 014590 339 QNTGEVLSRC 348 (422)
Q Consensus 339 ~~~~~~~~~~ 348 (422)
..+.+..+..
T Consensus 242 ~~~~k~~~K~ 251 (395)
T PF08596_consen 242 PPKSKGAHKS 251 (395)
T ss_dssp TT---EEEEE
T ss_pred CCCCccccee
Confidence 8777665544
No 357
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.038 Score=49.04 Aligned_cols=187 Identities=16% Similarity=0.204 Sum_probs=102.1
Q ss_pred EecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec-----
Q 014590 159 FDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM----- 231 (422)
Q Consensus 159 ~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----- 231 (422)
|.++...|+ --..+.|.-|+..++........+........ +....+.++.. .+.+++.+++..+..+..
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~~~~~~~~~--d~~g~Lv~~~~-g~~~~~~~~~~~~t~~~~~~~~~ 108 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPGGFSSGALI--DAGGRLIACEH-GVRLLDPDTGGKITLLAEPEDGL 108 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCCCcccceee--cCCCeEEEEcc-ccEEEeccCCceeEEeccccCCC
Confidence 344444343 23456677777765543322222222111111 22223333333 355666655554222211
Q ss_pred CCccEEEEEecCCCEEEEEcCC------------CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC-CCeE
Q 014590 232 HCAPVTSLSLSEDQLIISGSSL------------GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT-AGYA 291 (422)
Q Consensus 232 ~~~~v~~l~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~-dg~i 291 (422)
.....+.+.+.|+..+..+... |.++.+|. .+... ...+.++||||++.|+.+.. .+.|
T Consensus 109 ~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i 187 (307)
T COG3386 109 PLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRI 187 (307)
T ss_pred CcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeE
Confidence 1134466777777555555444 33444443 23322 55678999999988887765 4778
Q ss_pred EEEECCC--Ce-----eeeeeccCCCceeeeeeEecCCCEEEEEecCC-eEEEEECCCCceEEEeeec
Q 014590 292 SCWDLRT--MK-----SLWETRISPNVVYSLQHLQNDTSTLVVGGIDG-VLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 292 ~iwd~~~--~~-----~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg-~v~vwd~~~~~~~~~~~~~ 351 (422)
.-|++.. +. .........+..-.++ ...+|.+-+++..+| .|.+|+.. |+.+..+...
T Consensus 188 ~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~-vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP 253 (307)
T COG3386 188 HRYDLDPATGPIGGRRGFVDFDEEPGLPDGMA-VDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLP 253 (307)
T ss_pred EEEecCcccCccCCcceEEEccCCCCCCCceE-EeCCCCEEEecccCCceEEEECCC-CcEEEEEECC
Confidence 8887752 21 1112222345555666 778888776555554 89999988 9999888775
No 358
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.65 E-value=0.0015 Score=64.41 Aligned_cols=129 Identities=10% Similarity=0.049 Sum_probs=94.2
Q ss_pred EecCCCeEEEEeCCCcceeeeeecCCcc-EEEEEecC------CCEEEEEcCCCcEEEEeCCCCc--cc----------c
Q 014590 208 VGCEDGTARVFDMYSRKCSQIIRMHCAP-VTSLSLSE------DQLIISGSSLGSIAISGLSSDQ--RL----------T 268 (422)
Q Consensus 208 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~l~~~~------~~~l~s~~~dg~i~iwd~~~~~--~~----------~ 268 (422)
.......|+-.|++.|+.+.....|... |..++-.. +...+.|-.+..+..||.|-.. .+ .
T Consensus 499 ~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~ 578 (794)
T PF08553_consen 499 DPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN 578 (794)
T ss_pred cCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence 3345678999999999999999877654 66654321 2356677788899999988532 22 5
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
...|++-+.+| +||+|+.+|.|++||--..+....+.+-..+|..|. .+.||++|++.+. ..+.+++.
T Consensus 579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iD-vt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGID-VTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred CceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEE-ecCCCcEEEEeec-ceEEEEEE
Confidence 56677766555 799999999999999543333344566678999999 9999999887764 45777775
No 359
>PHA02713 hypothetical protein; Provisional
Probab=97.58 E-value=0.019 Score=55.97 Aligned_cols=176 Identities=9% Similarity=0.029 Sum_probs=91.1
Q ss_pred CCeEEEecCC------CeEEEEeCCCccee--eeeecCCccEEEEEecCCCEEEEEcCCC-----cEEEEeCCCCccc--
Q 014590 203 DPEAVVGCED------GTARVFDMYSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSSLG-----SIAISGLSSDQRL-- 267 (422)
Q Consensus 203 ~~~l~~~~~d------~~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~-- 267 (422)
+...+.|+.+ ..+..||+.+++-. ..+...... .+++...+...+.|+.++ .+..||..+.+-.
T Consensus 304 ~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~-~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~ 382 (557)
T PHA02713 304 NEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCR-FSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKML 382 (557)
T ss_pred CEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhc-eeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEEC
Confidence 3335666643 35778898776422 111111111 234444667778887764 4788998765433
Q ss_pred -------cceEeEEEecCCCEEEEEeCCC-----------------------eEEEEECCCCe--eeeeeccCCCceeee
Q 014590 268 -------TGIKTLCYNPCSRLVFAGTTAG-----------------------YASCWDLRTMK--SLWETRISPNVVYSL 315 (422)
Q Consensus 268 -------~~v~~~~~~~~~~~l~~g~~dg-----------------------~i~iwd~~~~~--~~~~~~~~~~~v~~l 315 (422)
.....++ -+|...+.|+.++ .+..||..+.+ .+..+...... .++
T Consensus 383 ~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~-~~~ 459 (557)
T PHA02713 383 PDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIR-PGV 459 (557)
T ss_pred CCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCccccc-CcE
Confidence 1111222 3677777777542 47778877543 22222111111 112
Q ss_pred eeEecCCCEEEEEecCC------eEEEEECCC-CceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCC
Q 014590 316 QHLQNDTSTLVVGGIDG------VLRVLDQNT-GEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIR 388 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg------~v~vwd~~~-~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~ 388 (422)
..-+++..+.|+.++ .+..||..+ .+-...-.. ....
T Consensus 460 --~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m----------------------------------~~~r 503 (557)
T PHA02713 460 --VSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTT----------------------------------ESRL 503 (557)
T ss_pred --EEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEcccc----------------------------------Cccc
Confidence 224566666666542 345566654 222111000 0012
Q ss_pred CCeEEEEecCEEEEEEeCCC--eEEEEEccCC
Q 014590 389 PPITCLAVGMKKVVTTHNSK--YIRLWKFNYS 418 (422)
Q Consensus 389 ~~v~~i~~~~~~l~s~s~Dg--~i~iW~~~~~ 418 (422)
.....+.++++..++||.|| ++..||+.+.
T Consensus 504 ~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~ 535 (557)
T PHA02713 504 SALHTILHDNTIMMLHCYESYMLQDTFNVYTY 535 (557)
T ss_pred ccceeEEECCEEEEEeeecceeehhhcCcccc
Confidence 23445566899999999998 6777777654
No 360
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.58 E-value=0.065 Score=50.26 Aligned_cols=216 Identities=13% Similarity=0.059 Sum_probs=102.2
Q ss_pred eEEeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCc
Q 014590 105 IDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~ 183 (422)
++.+....-....+.+ |+|.++....||.-.|+.....+.... .......|...+++.+-..+++|.++.--+..
T Consensus 25 ~k~lg~~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~~----G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 25 VKELGSCEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKAF----GSGLSFVWSSRNRYAVLESSSTIKIYKNFKNE 100 (443)
T ss_dssp -EEEEE-SS--SEEEE-TTSSEEEEEETTEEEEEETTTTEEEEE----EE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-
T ss_pred eccCCCCCcCCeeEEECCCCCEEEEEcCCEEEEEEccCCccccc----CceeEEEEecCccEEEEECCCeEEEEEcCccc
Confidence 3445555666888988 566444446788998988554444332 12344778886665556668889996332222
Q ss_pred e--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEe
Q 014590 184 S--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (422)
Q Consensus 184 ~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd 260 (422)
. .+... .....+.. |..|...+ ++.|.+||.++++.+..+... +|..+.|+++ ++++..+. ..+.+++
T Consensus 101 ~~k~i~~~-~~~~~If~----G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~-~~i~il~ 171 (443)
T PF04053_consen 101 VVKSIKLP-FSVEKIFG----GNLLGVKS-SDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTK-DSIYILK 171 (443)
T ss_dssp TT-----S-S-EEEEE-----SSSEEEEE-TTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred cceEEcCC-cccceEEc----CcEEEEEC-CCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeC-CeEEEEE
Confidence 1 11111 11111111 45455554 448999999999999988743 4899999987 66666654 4777776
Q ss_pred CCCC--------------ccc----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 261 LSSD--------------QRL----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 261 ~~~~--------------~~~----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
.... ..+ ..|.+.+|..+ .++-.+.. .++. +..|+.- .+..-..+++=+. ..+..
T Consensus 172 ~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~-~i~~ld~~~yllg-y~~~~ 244 (443)
T PF04053_consen 172 YNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETG-IIAHLDKPLYLLG-YLPKE 244 (443)
T ss_dssp E-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEE-EEEE-SS--EEEE-EETTT
T ss_pred ecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcc-eEEEcCCceEEEE-EEccC
Confidence 5433 111 45666666443 33322222 4444 2222211 1111123344444 44555
Q ss_pred CEEEEEecCCeEEEEECC
Q 014590 323 STLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~ 340 (422)
+.+.....|+.|..+.+.
T Consensus 245 ~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 245 NRLYLIDRDGNVISYELD 262 (443)
T ss_dssp TEEEEE-TT--EEEEE--
T ss_pred CEEEEEECCCCEEEEEEC
Confidence 666666666666666554
No 361
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.57 E-value=0.00022 Score=40.82 Aligned_cols=39 Identities=21% Similarity=0.195 Sum_probs=33.8
Q ss_pred CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 299 MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
+++...+..|...|.++. +.+++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVA-FSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEE-ECCCCCEEEEecCCCeEEEcC
Confidence 355667778888999999 888889999999999999996
No 362
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.57 E-value=0.031 Score=51.61 Aligned_cols=214 Identities=11% Similarity=0.087 Sum_probs=103.9
Q ss_pred ccccceeeEEeeccccceeEEEecC-CeEEEEecCCeEEEEEcCCCeEEEeeeCCC---------ceeeEEEec-----C
Q 014590 98 LEEGRIDIDQWKAHSVGVDQCRMKR-GLILTGVGDKVMRLWSLEGYKCVEEYSLPN---------AASLVDFDF-----D 162 (422)
Q Consensus 98 ~~~~~~~~~~l~~H~~~v~~v~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~-----~ 162 (422)
++++-.+..-++...++|++++.+| |++|.|..+|.+.|.|+.....+..-...+ .+..+.|+. |
T Consensus 72 ~~~gf~P~~l~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D 151 (395)
T PF08596_consen 72 LKEGFLPLTLLDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGD 151 (395)
T ss_dssp -SEEEEEEEEE---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTS
T ss_pred cccccCchhheeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCC
Confidence 3445556667778899999999965 599999999999999998877776633211 233344442 2
Q ss_pred CC---eE-EEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCC--CeEEEEeCCCcceeeeeecCCccE
Q 014590 163 ES---KI-VGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCED--GTARVFDMYSRKCSQIIRMHCAPV 236 (422)
Q Consensus 163 ~~---~l-~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~v 236 (422)
+. .+ +|+..|.+.+|.+.-. ......+...... ....+ ..|...|.++|+........-.
T Consensus 152 ~ySSi~L~vGTn~G~v~~fkIlp~-----~~g~f~v~~~~~~-------~~~~~~i~~I~~i~~~~G~~a~At~~~~~-- 217 (395)
T PF08596_consen 152 GYSSICLLVGTNSGNVLTFKILPS-----SNGRFSVQFAGAT-------TNHDSPILSIIPINADTGESALATISAMQ-- 217 (395)
T ss_dssp SSEEEEEEEEETTSEEEEEEEEE------GGG-EEEEEEEEE---------SS----EEEEEETTT--B-B-BHHHHH--
T ss_pred cccceEEEEEeCCCCEEEEEEecC-----CCCceEEEEeecc-------ccCCCceEEEEEEECCCCCcccCchhHhh--
Confidence 21 12 3777788877765210 0011111000000 01111 1233345555443211100000
Q ss_pred EEEEecCC---CEEEEEcCCCcEEEEeCCCCccc-----c--ceEeEEE-----ecCCCEEEEEeCCCeEEEEECCCCee
Q 014590 237 TSLSLSED---QLIISGSSLGSIAISGLSSDQRL-----T--GIKTLCY-----NPCSRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 237 ~~l~~~~~---~~l~s~~~dg~i~iwd~~~~~~~-----~--~v~~~~~-----~~~~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
...++ +-++....+..++++...+.+.. . ....+.+ ...+..|++-..+|.|++|.+...+.
T Consensus 218 ---~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lke 294 (395)
T PF08596_consen 218 ---GLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKE 294 (395)
T ss_dssp ---GGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--E
T ss_pred ---ccccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchH
Confidence 00111 22344445678888888776554 1 1112233 23566788888999999999999888
Q ss_pred eeeeccCC----CceeeeeeEecCCCEEEEEe
Q 014590 302 LWETRISP----NVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 302 ~~~~~~~~----~~v~~l~~~s~~~~~l~s~~ 329 (422)
+..+.... ..+.... ++++|..++-.+
T Consensus 295 i~~~~l~~~~d~~~~~~ss-is~~Gdi~~~~g 325 (395)
T PF08596_consen 295 IKSVSLPPPLDSRRLSSSS-ISRNGDIFYWTG 325 (395)
T ss_dssp EEEEE-SS---HHHHTT-E-E-TTS-EEEE-S
T ss_pred hhcccCCCccccccccccE-ECCCCCEEEEeC
Confidence 87776542 2333444 677777665554
No 363
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=97.47 E-value=0.00012 Score=70.66 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=104.2
Q ss_pred eeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCC--eEEEE
Q 014590 225 CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAG--YASCW 294 (422)
Q Consensus 225 ~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg--~i~iw 294 (422)
..++++.|....+|++|+-+ ++++.|+..|.|+++++.+|... ..|+.+.-+.+|..+++.+... -..+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 45567778889999999965 89999999999999999998876 7888888888998887766443 36789
Q ss_pred ECCC-CeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC----cccccCCCCCCeEEee
Q 014590 295 DLRT-MKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG----SASSSSNKVSGVIERN 369 (422)
Q Consensus 295 d~~~-~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~----~~~~~~~s~d~~i~~~ 369 (422)
++.. +.+.+++.. -.++. |+...+.-+.|+.-....+||+.++.++.++..... ...++.++++-.+..+
T Consensus 1173 ~~~s~~~~~Hsf~e----d~~vk-Fsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln 1247 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFDE----DKAVK-FSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN 1247 (1516)
T ss_pred ccccccCccccccc----cceee-hhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee
Confidence 8863 444444443 34566 766555445555556699999999988877543322 2267888888777665
Q ss_pred ec
Q 014590 370 EG 371 (422)
Q Consensus 370 ~~ 371 (422)
++
T Consensus 1248 dG 1249 (1516)
T KOG1832|consen 1248 DG 1249 (1516)
T ss_pred Cc
Confidence 55
No 364
>PHA02713 hypothetical protein; Provisional
Probab=97.45 E-value=0.021 Score=55.65 Aligned_cols=216 Identities=10% Similarity=0.077 Sum_probs=110.5
Q ss_pred CeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecC------CeEEEEECCCCceee-ecCCCceeeeEEEeee
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIG------TRICIWRRNGLRSVF-PSREGTFMKGLCMRYF 202 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~------~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~ 202 (422)
..+..||..+++....-..+... .......++..++ |+.+ ..+..||..+..... ................
T Consensus 272 ~~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~ 351 (557)
T PHA02713 272 PCILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVID 351 (557)
T ss_pred CCEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEEC
Confidence 35778898877654332222221 1122233555544 5532 347788887765321 1111111112222233
Q ss_pred CCeEEEecCCC-----eEEEEeCCCccee--eeeecCCccEEEEEecCCCEEEEEcCCC---------------------
Q 014590 203 DPEAVVGCEDG-----TARVFDMYSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSSLG--------------------- 254 (422)
Q Consensus 203 ~~~l~~~~~d~-----~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~dg--------------------- 254 (422)
+...+.|+.++ ++..||+.+.+-. ..+....... +++...+.+.+.|+.++
T Consensus 352 g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~-~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 430 (557)
T PHA02713 352 DTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSY-GMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHS 430 (557)
T ss_pred CEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccc-cEEEECCEEEEEeCCCcccccccccccccccccccccc
Confidence 44456676653 4888998766422 2222111111 22233566777777553
Q ss_pred --cEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCC------CeEEEEECCC-C--eeeeeeccCCCceeeee
Q 014590 255 --SIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTA------GYASCWDLRT-M--KSLWETRISPNVVYSLQ 316 (422)
Q Consensus 255 --~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~~~-~--~~~~~~~~~~~~v~~l~ 316 (422)
.+..||..+.+-. .....-+..-+++..+.|+.+ ..+..||..+ . ..+..+.........+.
T Consensus 431 ~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~ 510 (557)
T PHA02713 431 SNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL 510 (557)
T ss_pred cceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence 4777887766443 111111122356666777654 2467899886 2 33333433322222222
Q ss_pred eEecCCCEEEEEecCC--eEEEEECCCCceEEEeeec
Q 014590 317 HLQNDTSTLVVGGIDG--VLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~ 351 (422)
-+++..++|+.|| .+..||..+.+-......|
T Consensus 511 ---~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~ 544 (557)
T PHA02713 511 ---HDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQH 544 (557)
T ss_pred ---ECCEEEEEeeecceeehhhcCcccccccchhhhc
Confidence 4788888999888 7778888776654443333
No 365
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.44 E-value=0.093 Score=48.12 Aligned_cols=209 Identities=11% Similarity=0.029 Sum_probs=112.5
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCC------------------c
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREG------------------T 192 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~------------------~ 192 (422)
.+.+.|+|+++++...............++|+|+.++-..++.|.+.+..++........+ .
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~ 101 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFD 101 (353)
T ss_dssp EEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSS
T ss_pred ceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecCceEEEECCCCCeEEeccccceeEEcCccceeccccccc
Confidence 4678899999977766555555667799999999999777899999988765433111111 1
Q ss_pred eeeeEEEeeeCCeEEEecC----------------------------------CC--eEEEEeCCCcceeeee-----ec
Q 014590 193 FMKGLCMRYFDPEAVVGCE----------------------------------DG--TARVFDMYSRKCSQII-----RM 231 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~----------------------------------d~--~i~iwd~~~~~~~~~~-----~~ 231 (422)
....+.|++++..|+.... +. .+.++|+.+++....- ..
T Consensus 102 ~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~ 181 (353)
T PF00930_consen 102 RRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNP 181 (353)
T ss_dssp SSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHT
T ss_pred cccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCC
Confidence 1234555665555332221 11 1334566555432111 12
Q ss_pred CCccEEEEEecCCCE-EEEE--cCC---CcEEEEeCCCCccc-----------cceEeEEEe-cCCC-EEEEEeCCCe--
Q 014590 232 HCAPVTSLSLSEDQL-IISG--SSL---GSIAISGLSSDQRL-----------TGIKTLCYN-PCSR-LVFAGTTAGY-- 290 (422)
Q Consensus 232 ~~~~v~~l~~~~~~~-l~s~--~~d---g~i~iwd~~~~~~~-----------~~v~~~~~~-~~~~-~l~~g~~dg~-- 290 (422)
-...+..+.|.+++. ++.. ..+ ..+.+.|..++... .......+. +++. ++.....+|.
T Consensus 182 ~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~h 261 (353)
T PF00930_consen 182 QDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRH 261 (353)
T ss_dssp SSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEE
T ss_pred CccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcE
Confidence 234567788876632 4333 222 23666777665543 222344444 5554 4445556664
Q ss_pred EEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEE-EEecC----CeEEEEECC
Q 014590 291 ASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLV-VGGID----GVLRVLDQN 340 (422)
Q Consensus 291 i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~-s~~~d----g~v~vwd~~ 340 (422)
|.+++...+. ...+....-.|..+..++++++.|+ ++..+ ..|+.-++.
T Consensus 262 ly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~ 315 (353)
T PF00930_consen 262 LYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLD 315 (353)
T ss_dssp EEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETT
T ss_pred EEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeC
Confidence 5556666555 3355555666766655788877544 44432 244444554
No 366
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.42 E-value=0.0041 Score=60.18 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=50.0
Q ss_pred eeEEEecCC--eEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 115 VDQCRMKRG--LILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 115 v~~v~~~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
+++++|++. .|+.|-.-|.+.+|...+.+.-..... +..+..+.||++|..++ +..-|.+.+|..+
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 456888554 888888899999999877444333332 34456699999999999 7777999999865
No 367
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.40 E-value=0.094 Score=47.41 Aligned_cols=125 Identities=19% Similarity=0.230 Sum_probs=79.8
Q ss_pred CeEEEEeCCCc----ceeeee--ecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCc-cc------cceEeEEEecCC
Q 014590 213 GTARVFDMYSR----KCSQII--RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQ-RL------TGIKTLCYNPCS 279 (422)
Q Consensus 213 ~~i~iwd~~~~----~~~~~~--~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~-~~------~~v~~~~~~~~~ 279 (422)
|.|.++++... ..+..+ ....++|.+++-..+. ++++ .++.|.+|++...+ .. ..+..++....+
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~ 139 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNGR-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFK 139 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETTE-EEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEET
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCCE-EEEe-ecCEEEEEEccCcccchhhheecceEEEEEEeccc
Confidence 88999999873 122221 2347889999887555 4443 34799999998877 33 333344444457
Q ss_pred CEEEEEeCCCeEEEEECCC-Ceeeeee--ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 280 RLVFAGTTAGYASCWDLRT-MKSLWET--RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 280 ~~l~~g~~dg~i~iwd~~~-~~~~~~~--~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+++++|.....+.++..+. ...+..+ ......++++. +-++++.++.+..+|.+.++...
T Consensus 140 ~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~-~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 140 NYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAE-FLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp TEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEE-EE-SSSEEEEEETTSEEEEEEE-
T ss_pred cEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEE-EecCCcEEEEEcCCCeEEEEEEC
Confidence 7999999877788774432 2222222 22346688888 54455689999999999999765
No 368
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.31 E-value=0.15 Score=47.70 Aligned_cols=182 Identities=14% Similarity=0.073 Sum_probs=102.8
Q ss_pred eEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecC----CCceeee--EEEeeeCCe
Q 014590 133 VMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSR----EGTFMKG--LCMRYFDPE 205 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~ 205 (422)
.|+||+.. |+.+..+.-. +....+.|+.+...++...+|.++++|+.+.. .+... ...+..+ .+....+..
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~G 139 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNG 139 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCC
Confidence 59999975 5666665543 45566888888777889999999999987555 21111 1111111 111112123
Q ss_pred EEEecCCCeEEEEeCCCcc-eeeee---ec-----CCc-cEEE-EEecCC-CEEEEEcCCCcEEEEeCCCCccc---cce
Q 014590 206 AVVGCEDGTARVFDMYSRK-CSQII---RM-----HCA-PVTS-LSLSED-QLIISGSSLGSIAISGLSSDQRL---TGI 270 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~-~~~~~---~~-----~~~-~v~~-l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---~~v 270 (422)
++.-..++.+.+.+-.... ....+ .. +.. .... ..++.+ ...+....++.+.+.+-...+.+ +++
T Consensus 140 ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~i~~~~~i 219 (410)
T PF04841_consen 140 IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQIDSDGPI 219 (410)
T ss_pred EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccccccCCCCe
Confidence 4444455555544322211 11111 10 100 1111 123323 44555556667775554332222 689
Q ss_pred EeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC-CCceeeee
Q 014590 271 KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS-PNVVYSLQ 316 (422)
Q Consensus 271 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~l~ 316 (422)
..|++||+|+++|.-..+|.+.+.+..-.+.+.++... ......+.
T Consensus 220 ~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~ 266 (410)
T PF04841_consen 220 IKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMA 266 (410)
T ss_pred EEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEE
Confidence 99999999999999999999999887666666665544 24455666
No 369
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.30 E-value=0.00091 Score=38.04 Aligned_cols=37 Identities=30% Similarity=0.449 Sum_probs=29.2
Q ss_pred ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEe
Q 014590 224 KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (422)
Q Consensus 224 ~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd 260 (422)
++...+..|...|.++.+.++ +.+++++.|+.+++||
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 455666678888888888865 7888888888888886
No 370
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.28 E-value=0.095 Score=44.90 Aligned_cols=180 Identities=11% Similarity=0.076 Sum_probs=95.7
Q ss_pred eeeEEEecCCCeEE--EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-----
Q 014590 154 ASLVDFDFDESKIV--GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK----- 224 (422)
Q Consensus 154 ~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----- 224 (422)
..-+++.|+.+.|+ ....+.|..++.++ +.+ .......-...+++...+.++++.-.++.+.++++....
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~~~i~els~~G-~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~ 102 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEPGEIYELSLDG-KVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDR 102 (248)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--E
T ss_pred ccccEEcCCCCeEEEEECCCCEEEEEcCCC-CEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccch
Confidence 45599999888776 45567777777653 322 111111222344444344345555558889888873321
Q ss_pred -eeeeee-----cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCC---Cccc---------------cceEeEEEecCC
Q 014590 225 -CSQIIR-----MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS---DQRL---------------TGIKTLCYNPCS 279 (422)
Q Consensus 225 -~~~~~~-----~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~---~~~~---------------~~v~~~~~~~~~ 279 (422)
....+. .+...+-.++|++. +.++.+-...-..++.+.. ...+ ..+.+++++|..
T Consensus 103 ~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t 182 (248)
T PF06977_consen 103 ADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRT 182 (248)
T ss_dssp EEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTT
T ss_pred hhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCC
Confidence 112221 24456899999975 6666666665666666543 1111 668889999864
Q ss_pred -CEEEEEeCCCeEEEEECCCCeeeeeeccCC---------CceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 280 -RLVFAGTTAGYASCWDLRTMKSLWETRISP---------NVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 280 -~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
.+++....+..|..+| .+|+.+..+.... ...-.|+ ++++|+.. ..++-+..++|
T Consensus 183 ~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa-~d~~G~LY-IvsEpNlfy~f 247 (248)
T PF06977_consen 183 GHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIA-FDPDGNLY-IVSEPNLFYRF 247 (248)
T ss_dssp TEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEE-E-TT--EE-EEETTTEEEEE
T ss_pred CeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEE-ECCCCCEE-EEcCCceEEEe
Confidence 5666777888899999 5577665543322 2456788 88888644 44466666655
No 371
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.23 E-value=0.0053 Score=56.39 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=96.5
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCC--------eEEEecCCeEEEEECCCCce-e---eecCCC
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDES--------KIVGLIGTRICIWRRNGLRS-V---FPSREG 191 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~i~~w~~~~~~~-~---~~~~~~ 191 (422)
.|.++.....++--|++.|+.+.++..+..+..+.+.|+.+ .|+|-.++.|.-||.+-... . .+.++-
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 56666667778888999999999999988877888888654 47788999999999863221 1 122211
Q ss_pred c-eeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC
Q 014590 192 T-FMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 192 ~-~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~ 262 (422)
. .....|+.. .+.++++||.+|.|++||--..+....+++...+|..+..+.++..+.|..+..+.+.++.
T Consensus 428 ~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 428 STKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 1 111223333 3445999999999999997333344556788889999999866444455566777777753
No 372
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.20 E-value=0.00018 Score=64.01 Aligned_cols=45 Identities=24% Similarity=0.395 Sum_probs=41.2
Q ss_pred cccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHH
Q 014590 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLL 67 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 67 (422)
.--.||+|+.+++|+|||-+.|.+++++|+.|+.++.|-.-|+..
T Consensus 71 ~~~~LPpEl~lkvFS~LDtksl~r~a~~c~~~n~~AlD~~~~q~i 115 (483)
T KOG4341|consen 71 ISRSLPPELLLKVFSMLDTKSLCRAAQCCTMWNKLALDGSCWQHI 115 (483)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccccceee
Confidence 445699999999999999999999999999999999999999744
No 373
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.20 E-value=0.19 Score=46.63 Aligned_cols=191 Identities=8% Similarity=0.084 Sum_probs=131.2
Q ss_pred EEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee---cCCeEEEEECCCCceeeecC
Q 014590 117 QCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL---IGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 117 ~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~i~~w~~~~~~~~~~~~ 189 (422)
.+++ +.+ ..++...++.|.+.|..+.+.............++++++++.+. +. .++++.+.|..+........
T Consensus 78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~ 157 (381)
T COG3391 78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP 157 (381)
T ss_pred ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe
Confidence 4444 334 45555557899999988888888887777777899999998876 33 36889999998887654444
Q ss_pred CCceeeeEEEeeeCCeEE-EecCCCeEEEEeCCCcceee-e----eecCCccEEEEEecCC-CEEEEE-cCC--CcEEEE
Q 014590 190 EGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKCSQ-I----IRMHCAPVTSLSLSED-QLIISG-SSL--GSIAIS 259 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~-~----~~~~~~~v~~l~~~~~-~~l~s~-~~d--g~i~iw 259 (422)
.+.....+.+.+.+..++ +-..++.|.+.|........ . ..... .-..+.++|+ ..+.+. ..+ +.+...
T Consensus 158 vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~-~P~~i~v~~~g~~~yV~~~~~~~~~v~~i 236 (381)
T COG3391 158 VGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGT-GPAGIAVDPDGNRVYVANDGSGSNNVLKI 236 (381)
T ss_pred cCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCC-CCceEEECCCCCEEEEEeccCCCceEEEE
Confidence 443335777888888644 44578999999976655442 1 22222 2356777776 433333 333 588889
Q ss_pred eCCCCccc-------c-ceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccC
Q 014590 260 GLSSDQRL-------T-GIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 260 d~~~~~~~-------~-~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~ 308 (422)
|..++... . ....+..+|+|..+.+... .+.+.+.|..+..........
T Consensus 237 d~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~ 294 (381)
T COG3391 237 DTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTG 294 (381)
T ss_pred eCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeeccc
Confidence 98887665 2 3456799999999988854 488999999887776655443
No 374
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.16 E-value=0.21 Score=50.22 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCeEEEecCCCeEEEEeCCCcceeeeeecCCcc--------EEEEEecC-----------------CCEEEEEcCCCcEE
Q 014590 203 DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP--------VTSLSLSE-----------------DQLIISGSSLGSIA 257 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--------v~~l~~~~-----------------~~~l~s~~~dg~i~ 257 (422)
+..++.++.++.|.-.|..+|+.+..+...... ...+++.. ++.++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 556888888999999999999988887533211 11222211 24788889999999
Q ss_pred EEeCCCCccc------cceE-------------eEEEec--CCCEEEEEeC----------CCeEEEEECCCCeeeeeec
Q 014590 258 ISGLSSDQRL------TGIK-------------TLCYNP--CSRLVFAGTT----------AGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 258 iwd~~~~~~~------~~v~-------------~~~~~~--~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~ 306 (422)
-.|.++|+.. +.+. .+.-.| .+..+++|+. +|.|+-+|.++|+.+.++.
T Consensus 274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWD 353 (764)
T ss_pred EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEe
Confidence 9999999876 1110 011111 2345666643 6889999999999998875
No 375
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.13 E-value=0.009 Score=54.92 Aligned_cols=131 Identities=11% Similarity=0.112 Sum_probs=93.0
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--------CEEEEEcCCCcEEEEeCCCCcc--c--------
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--------QLIISGSSLGSIAISGLSSDQR--L-------- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--------~~l~s~~~dg~i~iwd~~~~~~--~-------- 267 (422)
+.++.....++-.|++.|+.+.....+.. |+-+.+.|+ ..-+.|-.|..|.-||.+-... +
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 55666667788889999999988887766 666666664 1234566788999999874332 1
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
....|.+-..+ .++++|+.+|.|++||--..+....+++-..+|..+. .+.+|++|+..+ +..+.+-++.
T Consensus 428 ~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVd-vtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 428 STKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVD-VTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred ccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEE-eeccCcEEEEec-ccEEEEEEEe
Confidence 34445554444 4899999999999999743333445677778999999 999999888666 4456666653
No 376
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.11 E-value=0.0013 Score=53.72 Aligned_cols=133 Identities=16% Similarity=0.126 Sum_probs=81.9
Q ss_pred EEEecCCCeEEEEeCCCccee-eeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc--------cceEe-EEE
Q 014590 206 AVVGCEDGTARVFDMYSRKCS-QIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL--------TGIKT-LCY 275 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~-~~~ 275 (422)
+...+.+|.|+-++++..+.- +.-..|... ..+ .--+..++.|+.+|.|.+|+....-.. ..|.+ +.-
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v-~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~ 110 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG-QRV-VTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPN 110 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc-eee-cccCceEEeecccceEEEecCCccchHHHhhhcccccceecccc
Confidence 555677888888877543321 111112111 111 112368999999999999987622211 22222 222
Q ss_pred ecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEE--ecCCeEEEEECCC
Q 014590 276 NPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVG--GIDGVLRVLDQNT 341 (422)
Q Consensus 276 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~--~~dg~v~vwd~~~ 341 (422)
..++.+..++..||.|+.|++...+.+.....|. .++..+. .+..++.++.+ |.|..++.|++..
T Consensus 111 ~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~i-vv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 111 GRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELI-VVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeE-EecCCceEEeeccccchhhhhcchhh
Confidence 3455688899999999999999888877766676 4444444 55556666666 6677777777653
No 377
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.03 E-value=0.43 Score=47.81 Aligned_cols=219 Identities=14% Similarity=0.115 Sum_probs=116.2
Q ss_pred eEEEEecCCeEEEEEc--CCCeEEEe---eeCCCceeeEEEecCCCe-EEEecCCeEEEEECCCCceeeecCCCceeeeE
Q 014590 124 LILTGVGDKVMRLWSL--EGYKCVEE---YSLPNAASLVDFDFDESK-IVGLIGTRICIWRRNGLRSVFPSREGTFMKGL 197 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~--~~~~~~~~---~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 197 (422)
+|.++..||.+.-+.+ .+|+.-.. .-+..++..-.|+..+.. +++.+|.-.-+|..+..-......-.......
T Consensus 597 yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~kev~~~c 676 (1096)
T KOG1897|consen 597 YLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMC 676 (1096)
T ss_pred EEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchHHhhhhc
Confidence 9999999999876654 45443322 223334445667665544 44777777777765543321111111111111
Q ss_pred EEee--eCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC-CEEEEEcC-----------C---CcEEE
Q 014590 198 CMRY--FDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED-QLIISGSS-----------L---GSIAI 258 (422)
Q Consensus 198 ~~~~--~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-----------d---g~i~i 258 (422)
.+.. ....++++.. +.+++--+..-+ .++++.-+ .....+++.+. ..+.+.+. . ..+++
T Consensus 677 ~f~s~a~~d~l~~~~~-~~l~i~tid~iqkl~irtvpl~-~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~v 754 (1096)
T KOG1897|consen 677 PFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRTVPLG-ESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRV 754 (1096)
T ss_pred ccccccCCceEEEecC-CceEEEEecchhhcceeeecCC-CChhheEecccceEEEEEecccccchhhcCCcceEEEEEE
Confidence 1111 1122555543 456666554322 22333322 23445555542 22222211 1 13566
Q ss_pred EeCCCCccc-----------cceEeEEEecC-CCEEEEEe----------CCCeEEEEECCCCeeeeeeccC--CCceee
Q 014590 259 SGLSSDQRL-----------TGIKTLCYNPC-SRLVFAGT----------TAGYASCWDLRTMKSLWETRIS--PNVVYS 314 (422)
Q Consensus 259 wd~~~~~~~-----------~~v~~~~~~~~-~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~~--~~~v~~ 314 (422)
+|-.+.+.+ ..+.++.|..| +.++++|+ ..|.|.+|....++.+.....+ .+.+.+
T Consensus 755 lD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~a 834 (1096)
T KOG1897|consen 755 LDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYA 834 (1096)
T ss_pred ecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceee
Confidence 776665544 55666668877 67888876 3678888887764444333222 366777
Q ss_pred eeeEecCCCEEEEEecCCeEEEEECCCCceEEEe
Q 014590 315 LQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 315 l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
+.. -+|++||. -+..|++|+..+.+.++.-
T Consensus 835 L~~--fngkllA~--In~~vrLye~t~~~eLr~e 864 (1096)
T KOG1897|consen 835 LVE--FNGKLLAG--INQSVRLYEWTTERELRIE 864 (1096)
T ss_pred hhh--hCCeEEEe--cCcEEEEEEccccceehhh
Confidence 752 46776664 4667999999877555543
No 378
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.00 E-value=0.0034 Score=58.74 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=62.3
Q ss_pred ccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cce-EeEEEecCCCEEEEEeCCCeEEEEECCCCeeeee
Q 014590 234 APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGI-KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWE 304 (422)
Q Consensus 234 ~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 304 (422)
..+.-+.|+|. .++|.+..+|.+.+..+. -+.+ ..+ .+++|.|||+.+|+|-.||+|++.|..++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 45677889988 899999999977655544 2222 234 4999999999999999999999999998877655
Q ss_pred e-ccCCCceeeeeeEe
Q 014590 305 T-RISPNVVYSLQHLQ 319 (422)
Q Consensus 305 ~-~~~~~~v~~l~~~s 319 (422)
. ......|.++- |+
T Consensus 100 ~~~s~e~~is~~~-w~ 114 (665)
T KOG4640|consen 100 FLFSVETDISKGI-WD 114 (665)
T ss_pred cccccccchheee-cc
Confidence 2 12335566665 54
No 379
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.98 E-value=0.0041 Score=61.81 Aligned_cols=75 Identities=21% Similarity=0.197 Sum_probs=58.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCC-eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 278 CSRLVFAGTTAGYASCWDLRTM-KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 278 ~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
.+..++.|+..|.+...|.... .+...-..-.++|++++ |+.+|+.++.|-.+|.|.+||+..++.++.+..+..
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsva-fn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a 173 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVA-FNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA 173 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeE-ecCCCceeccccCCCcEEEEEccCCcceeeeeecCC
Confidence 4557889999999988887742 22122122348899999 999999999999999999999999999888876544
No 380
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.95 E-value=0.13 Score=43.96 Aligned_cols=200 Identities=12% Similarity=0.076 Sum_probs=114.2
Q ss_pred EEEEEcCCCeEEEeeeCCCceee---EEEecCCCeEEEecC------CeEEEEECCCCceeeecCC--CceeeeEEEeee
Q 014590 134 MRLWSLEGYKCVEEYSLPNAASL---VDFDFDESKIVGLIG------TRICIWRRNGLRSVFPSRE--GTFMKGLCMRYF 202 (422)
Q Consensus 134 v~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~------~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~ 202 (422)
..++|..+.+...++...+.... -.|++||.+|.++.+ |.|-+||...+-...-... +--..-+.+..+
T Consensus 93 ~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~D 172 (366)
T COG3490 93 AMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMAD 172 (366)
T ss_pred EEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecC
Confidence 35788887777666655443322 579999999986543 6799999885543221111 112234555666
Q ss_pred CCeEEEecC------------------CCeEEEEeCCCcceeeee--e--cCCccEEEEEecCCCEEEEEcC-C------
Q 014590 203 DPEAVVGCE------------------DGTARVFDMYSRKCSQII--R--MHCAPVTSLSLSEDQLIISGSS-L------ 253 (422)
Q Consensus 203 ~~~l~~~~~------------------d~~i~iwd~~~~~~~~~~--~--~~~~~v~~l~~~~~~~l~s~~~-d------ 253 (422)
+..++.+.. .-++.+.|..+|+.+... . .+.-.|..++..+++.++.|+. .
T Consensus 173 GrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ 252 (366)
T COG3490 173 GRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDL 252 (366)
T ss_pred CcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccC
Confidence 666544422 223445565566654332 2 2345677777776655555532 1
Q ss_pred ----------CcEEEEeCCCCccc---cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 254 ----------GSIAISGLSSDQRL---TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 254 ----------g~i~iwd~~~~~~~---~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
+.+...++...+.. ..|-+++.+.+..+++..+- .+...+||..+|..+..-.... ...++
T Consensus 253 ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~d--aaGva--- 327 (366)
T COG3490 253 PPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPD--AAGVA--- 327 (366)
T ss_pred CcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccc--cccce---
Confidence 12223333222221 77888888876666665554 4557789999998775533221 23333
Q ss_pred cCCCEEEEEecCCeEEEEE
Q 014590 320 NDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 320 ~~~~~l~s~~~dg~v~vwd 338 (422)
+...-++..+.+|.+.++.
T Consensus 328 ~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 328 AAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred eccCceEEecCCceEEecc
Confidence 3334456666788888774
No 381
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.94 E-value=0.27 Score=48.00 Aligned_cols=175 Identities=15% Similarity=0.166 Sum_probs=95.5
Q ss_pred eEEEecCC------CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCCCc-----EEEEeCCCCccc----
Q 014590 205 EAVVGCED------GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSLGS-----IAISGLSSDQRL---- 267 (422)
Q Consensus 205 ~l~~~~~d------~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~dg~-----i~iwd~~~~~~~---- 267 (422)
..++|+.| .++..||..+++-.. .+...... ..++...+.+.++|+.||. +-.||..+.+-.
T Consensus 335 lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~-~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~ 413 (571)
T KOG4441|consen 335 LYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSD-FGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP 413 (571)
T ss_pred EEEEccccCCCcccceEEEecCCCCceeccCCccCcccc-ceeEEECCEEEEEeccccccccccEEEecCCCCcccccCC
Confidence 36777777 457788887776222 12111111 2344446788899998864 677887765543
Q ss_pred --cceEeE-EEecCCCEEEEEeCCC------eEEEEECCCCe--eeeeeccCCCceeeeeeEecCCCEEEEEecCCe---
Q 014590 268 --TGIKTL-CYNPCSRLVFAGTTAG------YASCWDLRTMK--SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGV--- 333 (422)
Q Consensus 268 --~~v~~~-~~~~~~~~l~~g~~dg------~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~--- 333 (422)
...... ...-+|...++|+.++ .+..||..+.+ .+..+....... .+ ..-++...+.||.|+.
T Consensus 414 m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~-g~--a~~~~~iYvvGG~~~~~~~ 490 (571)
T KOG4441|consen 414 MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGF-GV--AVLNGKIYVVGGFDGTSAL 490 (571)
T ss_pred CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccc-eE--EEECCEEEEECCccCCCcc
Confidence 111111 1123777788887544 46778887643 222222111111 12 2246778888887762
Q ss_pred --EEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCe--
Q 014590 334 --LRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKY-- 409 (422)
Q Consensus 334 --v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~-- 409 (422)
|..||..+.+....-.. ......+.....++...+.|+.||.
T Consensus 491 ~~VE~ydp~~~~W~~v~~m----------------------------------~~~rs~~g~~~~~~~ly~vGG~~~~~~ 536 (571)
T KOG4441|consen 491 SSVERYDPETNQWTMVAPM----------------------------------TSPRSAVGVVVLGGKLYAVGGFDGNNN 536 (571)
T ss_pred ceEEEEcCCCCceeEcccC----------------------------------ccccccccEEEECCEEEEEecccCccc
Confidence 55566654443222100 1122344556668888888888764
Q ss_pred ---EEEEEccC
Q 014590 410 ---IRLWKFNY 417 (422)
Q Consensus 410 ---i~iW~~~~ 417 (422)
|..||..+
T Consensus 537 l~~ve~ydp~~ 547 (571)
T KOG4441|consen 537 LNTVECYDPET 547 (571)
T ss_pred cceeEEcCCCC
Confidence 55565544
No 382
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.93 E-value=0.27 Score=43.76 Aligned_cols=202 Identities=11% Similarity=0.021 Sum_probs=111.7
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCce--ee-ecCCC---ceeeeE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS--VF-PSREG---TFMKGL 197 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~--~~-~~~~~---~~~~~~ 197 (422)
++.+--..+.|.-|+..+++. ..+..+........-..+..|+++..+ +.+++.+++.. .+ ....+ ......
T Consensus 39 L~w~DI~~~~i~r~~~~~g~~-~~~~~p~~~~~~~~~d~~g~Lv~~~~g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~ 116 (307)
T COG3386 39 LLWVDILGGRIHRLDPETGKK-RVFPSPGGFSSGALIDAGGRLIACEHG-VRLLDPDTGGKITLLAEPEDGLPLNRPNDG 116 (307)
T ss_pred EEEEeCCCCeEEEecCCcCce-EEEECCCCcccceeecCCCeEEEEccc-cEEEeccCCceeEEeccccCCCCcCCCCce
Confidence 566666678888888876533 344444444444433344444433332 23333332222 11 11111 111122
Q ss_pred EEeeeCCeEEEecCC------------CeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEE-cCCCcEEEEeCCC
Q 014590 198 CMRYFDPEAVVGCED------------GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG-SSLGSIAISGLSS 263 (422)
Q Consensus 198 ~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~-~~dg~i~iwd~~~ 263 (422)
.+.+++. +..+... |.++.+|. .+..+..+..+-..-+.|+|+|+ +.++.+ +..+.|.-|++..
T Consensus 117 ~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~ 194 (307)
T COG3386 117 VVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDP 194 (307)
T ss_pred eEcCCCC-EEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCc
Confidence 2233332 2222222 34445554 45555555555555688999998 455555 5558888887753
Q ss_pred --Cccc------------cceEeEEEecCCCEEEEEeCCC-eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 264 --DQRL------------TGIKTLCYNPCSRLVFAGTTAG-YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 264 --~~~~------------~~v~~~~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
+... +..-.++...+|++.+++..+| .|.+|+.. ++++..+......+++++|-.++.+.|+..
T Consensus 195 ~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 195 ATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred ccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence 2111 3344566666777776555554 89999988 999988888767788888556666655554
Q ss_pred ec
Q 014590 329 GI 330 (422)
Q Consensus 329 ~~ 330 (422)
+.
T Consensus 274 s~ 275 (307)
T COG3386 274 SA 275 (307)
T ss_pred ec
Confidence 43
No 383
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.79 E-value=0.0048 Score=37.26 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=23.5
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
..|.+++|+|...++|.|+.+|.|.+|.+ +++.
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 45777777777777777777777777776 3443
No 384
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.73 E-value=0.26 Score=40.91 Aligned_cols=94 Identities=15% Similarity=0.039 Sum_probs=66.3
Q ss_pred cEEEEEecCC--CEEEEEcCCCcEEEEe--CCCCccc----------------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 235 PVTSLSLSED--QLIISGSSLGSIAISG--LSSDQRL----------------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 235 ~v~~l~~~~~--~~l~s~~~dg~i~iwd--~~~~~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
--+.++|+.+ .+.++-+.+-+|.-|| ..+|... ...-.+++..+|++.++.-..++|...
T Consensus 159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV 238 (310)
T ss_pred CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence 3356778755 3555566777787777 5555544 223345556678888888889999999
Q ss_pred ECCCCeeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 295 DLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 295 d~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
|..+|+.+.++......|+|++|--++-..+++.
T Consensus 239 dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFGGKNLDILYVT 272 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEecCCCccEEEEE
Confidence 9999999999999899999998433433444443
No 385
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.68 E-value=0.58 Score=44.03 Aligned_cols=224 Identities=14% Similarity=0.147 Sum_probs=119.1
Q ss_pred EEe-cCC-eEE-EEecCC----eEEEEEcCCCeEEEee-eCCCceeeEEEecCCCeEE-Eec-----------CCeEEEE
Q 014590 118 CRM-KRG-LIL-TGVGDK----VMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI-----------GTRICIW 177 (422)
Q Consensus 118 v~~-~~~-~l~-s~~~dg----~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~-----------~~~i~~w 177 (422)
..+ ++| ++| +-+..| .+++.|+++|+.+... .... ...+.|.++++.++ ... ...|+.|
T Consensus 129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~-~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~ 207 (414)
T PF02897_consen 129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK-FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRH 207 (414)
T ss_dssp EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE-SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEE
T ss_pred eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc-cceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEE
Confidence 445 566 444 445545 4999999999876543 3222 22399999999887 432 2347888
Q ss_pred ECCCCc----eeeecCCCce-eeeEEEeeeCCeEEE-ecC--C-CeEEEEeCCCc----ceeeeeecCCccE-EEEEecC
Q 014590 178 RRNGLR----SVFPSREGTF-MKGLCMRYFDPEAVV-GCE--D-GTARVFDMYSR----KCSQIIRMHCAPV-TSLSLSE 243 (422)
Q Consensus 178 ~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~--d-~~i~iwd~~~~----~~~~~~~~~~~~v-~~l~~~~ 243 (422)
.+.+.. .++....+.. ...+..+.++..++. ... + ..+.+.|+..+ .....+......+ ..+....
T Consensus 208 ~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~ 287 (414)
T PF02897_consen 208 KLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHG 287 (414)
T ss_dssp ETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEET
T ss_pred ECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccC
Confidence 887764 3455555554 334555666666432 222 2 46888888764 2233333333333 3344433
Q ss_pred CCEEEEE---cCCCcEEEEeCCCCccc----------c--ceEeEEEecCCCEEEEE-eCCC--eEEEEECCCCeeeeee
Q 014590 244 DQLIISG---SSLGSIAISGLSSDQRL----------T--GIKTLCYNPCSRLVFAG-TTAG--YASCWDLRTMKSLWET 305 (422)
Q Consensus 244 ~~~l~s~---~~dg~i~iwd~~~~~~~----------~--~v~~~~~~~~~~~l~~g-~~dg--~i~iwd~~~~~~~~~~ 305 (422)
+.+++.. ...+.|...++.+.... . .+..+.. .+.+|+.. ..++ .|+++++..+.....+
T Consensus 288 ~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~ 365 (414)
T PF02897_consen 288 DRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDDGKESREI 365 (414)
T ss_dssp TEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT-TEEEEEE
T ss_pred CEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECCCCcEEeee
Confidence 3444433 23456777777766531 2 2444433 44455444 3444 4888998834444444
Q ss_pred cc-CCCceeeeeeEecCCCEEE-E-Ee--cCCeEEEEECCCCceE
Q 014590 306 RI-SPNVVYSLQHLQNDTSTLV-V-GG--IDGVLRVLDQNTGEVL 345 (422)
Q Consensus 306 ~~-~~~~v~~l~~~s~~~~~l~-s-~~--~dg~v~vwd~~~~~~~ 345 (422)
.. ..+.|..+. ..+++..+. + .| .-+++..||+.+++..
T Consensus 366 ~~p~~g~v~~~~-~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 366 PLPEAGSVSGVS-GDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp ESSSSSEEEEEE-S-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred cCCcceEEeccC-CCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 33 335556655 555555332 2 22 2467888999888753
No 386
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.67 E-value=0.052 Score=54.44 Aligned_cols=103 Identities=20% Similarity=0.217 Sum_probs=72.5
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCCce--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC 233 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 233 (422)
++....+..++ ++..|.+...|..+.-. ....+....+..++++.++..++.|-.+|.|.+||+..++.++.+..|.
T Consensus 93 ~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ 172 (1206)
T KOG2079|consen 93 ISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHG 172 (1206)
T ss_pred eeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecC
Confidence 34444455566 77778888888776432 2223334455678888888889999999999999999999999988777
Q ss_pred ccEEEEEec---C-CCEEEEEcCCCcEEEEeC
Q 014590 234 APVTSLSLS---E-DQLIISGSSLGSIAISGL 261 (422)
Q Consensus 234 ~~v~~l~~~---~-~~~l~s~~~dg~i~iwd~ 261 (422)
.+...+-+. . +..++++...|. +|.+
T Consensus 173 ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 173 APVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 776665544 2 356777777776 4544
No 387
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.66 E-value=0.36 Score=41.37 Aligned_cols=225 Identities=14% Similarity=0.088 Sum_probs=126.4
Q ss_pred cceeEEEe--cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCe-EE-EecCCe-EEEEECCCCcee
Q 014590 113 VGVDQCRM--KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK-IV-GLIGTR-ICIWRRNGLRSV 185 (422)
Q Consensus 113 ~~v~~v~~--~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~-~~~~~~-i~~w~~~~~~~~ 185 (422)
.+|..-+| .|| ..++.+.+ |+++.....+....-++++|.-.. ++ +-.-|+ ..++|..+.+..
T Consensus 35 qavfasaf~~~dgs~g~a~~~ea----------Gk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~p 104 (366)
T COG3490 35 QAVFASAFDARDGSFGAATLSEA----------GKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEP 104 (366)
T ss_pred cchheeeeeccCCceeEEEEccC----------CceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCc
Confidence 34444455 355 55555544 455555655555556788885544 33 555555 466888776532
Q ss_pred --ee-cCCCceeeeEEEeeeCCeEEEecC-----CCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEEcC---
Q 014590 186 --FP-SREGTFMKGLCMRYFDPEAVVGCE-----DGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISGSS--- 252 (422)
Q Consensus 186 --~~-~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~--- 252 (422)
.. ....|...-=++++++..|+..-. -|.|-+||.+.+ +.+..+..|.-.-..+.+.+| +.++.+..
T Consensus 105 v~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIe 184 (366)
T COG3490 105 VTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIE 184 (366)
T ss_pred EEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCcee
Confidence 22 222333333345666666665543 378999998754 455666667666677888876 55554422
Q ss_pred ---------------CCcEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCCe-----EEEEECCCCee
Q 014590 253 ---------------LGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAGY-----ASCWDLRTMKS 301 (422)
Q Consensus 253 ---------------dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~-----i~iwd~~~~~~ 301 (422)
.-++.+.|..+|..+ -.|..++..+||..++.+-..|. -.+=....+++
T Consensus 185 thpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~ 264 (366)
T COG3490 185 THPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEP 264 (366)
T ss_pred cccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCc
Confidence 123455665566555 66888888888876665543321 11111122333
Q ss_pred eeeeccC-------CCceeeeeeEecCCCEEE-EEecCCeEEEEECCCCceEEEe
Q 014590 302 LWETRIS-------PNVVYSLQHLQNDTSTLV-VGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 302 ~~~~~~~-------~~~v~~l~~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
+.-+... ...|-+++ .+.+..+++ |+-..+...+||..+|..+..-
T Consensus 265 l~~~~~pee~~~~~anYigsiA-~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a 318 (366)
T COG3490 265 LEFLDLPEEQTAAFANYIGSIA-ANRRDGLVALTSPRGNRAVIWDAATGAVVSEA 318 (366)
T ss_pred CcccCCCHHHHHHHHhhhhhee-ecccCCeEEEecCCCCeEEEEEcCCCcEEecc
Confidence 3322211 23466676 544444444 4445567789999999876553
No 388
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.66 E-value=0.15 Score=47.68 Aligned_cols=173 Identities=16% Similarity=0.091 Sum_probs=96.9
Q ss_pred eeEEEecCCCeEE-E---ecC-CeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCe--EEEEeCCCccee
Q 014590 155 SLVDFDFDESKIV-G---LIG-TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGT--ARVFDMYSRKCS 226 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~---~~~-~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~--i~iwd~~~~~~~ 226 (422)
..-+|++++..++ . ... ..+.++++++++.............-.+++++.. +++...||. |.+.|+.+++..
T Consensus 196 ~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~ 275 (425)
T COG0823 196 LTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP 275 (425)
T ss_pred eccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce
Confidence 3467888888876 2 222 4699999988774322222222235567777777 455566665 556677666533
Q ss_pred eeeecCCccEEEEEecCC-CEEE-EEcCCCc--EEEEeCCCCccc------cceEeEEEecCCCEEEEEeCC-Ce--EEE
Q 014590 227 QIIRMHCAPVTSLSLSED-QLII-SGSSLGS--IAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTA-GY--ASC 293 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-~~l~-s~~~dg~--i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~d-g~--i~i 293 (422)
+ +..-.+.-..=.|+|+ +.++ +.+..|. |.+.|...+... ..-..-.++|||++++..+.. |. |.+
T Consensus 276 ~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~ 354 (425)
T COG0823 276 R-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDK 354 (425)
T ss_pred e-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEE
Confidence 3 3322222234456776 4444 4445554 556666555432 222266789999999877743 43 666
Q ss_pred EECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 294 WDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 294 wd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
.|+.++...+.+. +......-. +.++++.++..+.
T Consensus 355 ~~~~~~~~~~~lt-~~~~~e~ps-~~~ng~~i~~~s~ 389 (425)
T COG0823 355 NDLASGGKIRILT-STYLNESPS-WAPNGRMIMFSSG 389 (425)
T ss_pred eccCCCCcEEEcc-ccccCCCCC-cCCCCceEEEecc
Confidence 7776555333332 222222333 6678876665443
No 389
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.66 E-value=0.0039 Score=51.02 Aligned_cols=135 Identities=13% Similarity=0.018 Sum_probs=69.6
Q ss_pred EEEEecCCeEEEEEcCCCeEEE--eeeCCCceeeEEEe-cCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 125 ILTGVGDKVMRLWSLEGYKCVE--EYSLPNAASLVDFD-FDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 125 l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
+..-+.||.|+-+++...+.-. ....... .... .+.+.++++.+|.|.+|+....-............+.+..+
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip 109 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIP 109 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccc
Confidence 3344567777777665422111 1001111 1122 23334448889999998877332222111111112233333
Q ss_pred e---CCeEEEecCCCeEEEEeCCCcceeeeeecCC-ccEEEEEec-CCCEEEEE--cCCCcEEEEeCC
Q 014590 202 F---DPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-APVTSLSLS-EDQLIISG--SSLGSIAISGLS 262 (422)
Q Consensus 202 ~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~-~~~~l~s~--~~dg~i~iwd~~ 262 (422)
. +...++++.||.|+.|++.-++.+.....|. .++..+... .+..+..+ |.|..++.|++.
T Consensus 110 ~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 110 NGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 2 3347899999999999998888777666666 333333222 23444444 455555555543
No 390
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.64 E-value=0.32 Score=44.96 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=61.4
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce-eeeeeEecCC----------------C-EEEEEe
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV-YSLQHLQNDT----------------S-TLVVGG 329 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~s~~~----------------~-~l~s~~ 329 (422)
..+.+++.+|++++.|+...=|.|.++|+.++..++.+++..+.= .=+....... . +++-+-
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 458889999999999998888999999999998888877765321 1111011111 1 233455
Q ss_pred cCCeEEEEECCCCceEEEeeecCC
Q 014590 330 IDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 330 ~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
.-|.|.||.+++|..+..+....+
T Consensus 388 rRg~lEvW~~~~g~Rv~a~~v~k~ 411 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRVAAFNVGKG 411 (415)
T ss_pred cCCeEEEEecCCCCEEEEEEeCCC
Confidence 689999999999999988876443
No 391
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.61 E-value=0.14 Score=41.62 Aligned_cols=166 Identities=11% Similarity=0.033 Sum_probs=96.0
Q ss_pred EEEecCC-eEEEEecC--CeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeE--EEecCCeEEEEECCCCceee-ecC
Q 014590 117 QCRMKRG-LILTGVGD--KVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKI--VGLIGTRICIWRRNGLRSVF-PSR 189 (422)
Q Consensus 117 ~v~~~~~-~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l--~~~~~~~i~~w~~~~~~~~~-~~~ 189 (422)
.+.+.+| ++.+.+.- ..|++||+.+|+.+..-.... ...-=....-++.+ +...+|....+|.++.+.+- ...
T Consensus 50 GL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y 129 (262)
T COG3823 50 GLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY 129 (262)
T ss_pred ceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc
Confidence 3566677 66666553 479999999999887766542 11112222233443 37788889999988876542 222
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--CC---ccEEEEEecCCCEEEEEcCCCcEEEEeCCCC
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--HC---APVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~---~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~ 264 (422)
+|. ...+..++..|+.+....+++.-|.++-....++.. .. ..++.+.|-.+...+-.-.+..|...|..+|
T Consensus 130 ~Ge---GWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sG 206 (262)
T COG3823 130 EGE---GWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSG 206 (262)
T ss_pred CCc---ceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCC
Confidence 232 456666777788887777888888766544333321 11 2234444544444444444445555555555
Q ss_pred ccc-------------------cceEeEEEecCCC-EEEEE
Q 014590 265 QRL-------------------TGIKTLCYNPCSR-LVFAG 285 (422)
Q Consensus 265 ~~~-------------------~~v~~~~~~~~~~-~l~~g 285 (422)
+.+ ...+.+++.|++. ++++|
T Consensus 207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 543 3556677777763 34443
No 392
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.57 E-value=0.42 Score=41.04 Aligned_cols=187 Identities=10% Similarity=0.068 Sum_probs=104.8
Q ss_pred eEEeeccccceeEEEe-cC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCC--CceeeEEEecCCCeEEEe-cCCeEEEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIVGL-IGTRICIWR 178 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~~~i~~w~ 178 (422)
.+.+.|=...+..++| ++ + ++++....+.|...+. +|+.+..+... .....+++.-++.+++.. .++.+.+++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 3467777777999999 44 4 7777778888888886 47888877653 345568887777666655 478898888
Q ss_pred CCCCc-----e---ee--ecC--CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC---cceeeee--------ecCCcc
Q 014590 179 RNGLR-----S---VF--PSR--EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS---RKCSQII--------RMHCAP 235 (422)
Q Consensus 179 ~~~~~-----~---~~--~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~--------~~~~~~ 235 (422)
+.... . .+ ... .+.....+++.+.++.|+.+-......++.+.. ...+... ......
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 172 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRD 172 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS-
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecc
Confidence 74321 0 01 111 223346788888878877777776777776643 1111111 123345
Q ss_pred EEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc----------------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 236 VTSLSLSED--QLIISGSSLGSIAISGLSSDQRL----------------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 236 v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
+.+++++|. ++++....+..|..+| .+|+.+ .....|+|.++|++.++ ++-+..++|
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceEEEe
Confidence 788899875 5666777777888888 455543 46888999998865444 455544443
No 393
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.55 E-value=0.36 Score=40.09 Aligned_cols=118 Identities=13% Similarity=0.120 Sum_probs=70.6
Q ss_pred cEEEEEecCCCEEEEEcC----------CCcEEEEeCCCCccc-----cceEeEEEecCCCEEEE-EeCCCeEEEEE--C
Q 014590 235 PVTSLSLSEDQLIISGSS----------LGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFA-GTTAGYASCWD--L 296 (422)
Q Consensus 235 ~v~~l~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~-g~~dg~i~iwd--~ 296 (422)
..+.-..+|+..+..|.. .|.++.|-....-.. .--+.++|+.+.+.+.. -+.+-.|.-|| .
T Consensus 110 R~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~ 189 (310)
T KOG4499|consen 110 RLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDC 189 (310)
T ss_pred ccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeecCC
Confidence 445555667644444432 244555544322111 55567888877766554 45566776777 4
Q ss_pred CCCe-----eeeeeccC----CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 297 RTMK-----SLWETRIS----PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 297 ~~~~-----~~~~~~~~----~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
.+|. .+..++.. ....-.++ ...+|++.++.-..|+|...|..+|+.+.++.....
T Consensus 190 ~tG~~snr~~i~dlrk~~~~e~~~PDGm~-ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~ 254 (310)
T KOG4499|consen 190 PTGDLSNRKVIFDLRKSQPFESLEPDGMT-IDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTP 254 (310)
T ss_pred CcccccCcceeEEeccCCCcCCCCCCcce-EccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCC
Confidence 5543 23333221 11123344 566788878888889999999999999999877544
No 394
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.51 E-value=0.36 Score=47.21 Aligned_cols=180 Identities=12% Similarity=0.118 Sum_probs=100.2
Q ss_pred eEEEecCC-eEEEEecC------CeEEEEEcCCCeEEEeeeCCCceeeEEEec-CCCeEE-EecCC-----eEEEEECCC
Q 014590 116 DQCRMKRG-LILTGVGD------KVMRLWSLEGYKCVEEYSLPNAASLVDFDF-DESKIV-GLIGT-----RICIWRRNG 181 (422)
Q Consensus 116 ~~v~~~~~-~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~~~-----~i~~w~~~~ 181 (422)
.++++-+| ..++||.| .++..||..+++....-.........+... +|...+ |+.|| ++-.||..+
T Consensus 326 ~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~ 405 (571)
T KOG4441|consen 326 VGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVT 405 (571)
T ss_pred ccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCC
Confidence 34444455 77888888 467788888877554332232233333333 444444 77775 478888888
Q ss_pred CceeeecCCCceeeeEEEeeeCCe-EEEecCC------CeEEEEeCCCccee--eeeecCCccEEEEEecCCCEEEEEcC
Q 014590 182 LRSVFPSREGTFMKGLCMRYFDPE-AVVGCED------GTARVFDMYSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSS 252 (422)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d------~~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~ 252 (422)
.+-.............+....+.. .++|+.+ .++..||..+++-. ..+..... -..++...+.+.+.|+.
T Consensus 406 ~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~-~~g~a~~~~~iYvvGG~ 484 (571)
T KOG4441|consen 406 NKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRS-GFGVAVLNGKIYVVGGF 484 (571)
T ss_pred CcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccc-cceEEEECCEEEEECCc
Confidence 774433322222334444444444 6666644 45778998877532 22211111 12355556788888887
Q ss_pred CCc-----EEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCC-----eEEEEECCC
Q 014590 253 LGS-----IAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAG-----YASCWDLRT 298 (422)
Q Consensus 253 dg~-----i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~ 298 (422)
|+. +..||..+.+-. ..+-... -++...++|+.|| +|..||..+
T Consensus 485 ~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 485 DGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred cCCCccceEEEEcCCCCceeEcccCccccccccEEE--ECCEEEEEecccCccccceeEEcCCCC
Confidence 763 677888776654 1121222 2566777777665 355565544
No 395
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.50 E-value=0.38 Score=45.00 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=87.1
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCe--EEEEECCCCceeeecCCCceeeeEEEeeeCCeEE
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTR--ICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV 207 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~--i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (422)
..+.++++++++.............-+|+|||+.++ ...++. |.++|+.+...............-.+++++..++
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~iv 297 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIV 297 (425)
T ss_pred ceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEE
Confidence 358899999887766666555566689999999988 455555 6666777665322111112222456677777754
Q ss_pred Ee-cCCC--eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC-CCc--EEEEeCCCCccc------cceEeEE
Q 014590 208 VG-CEDG--TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-LGS--IAISGLSSDQRL------TGIKTLC 274 (422)
Q Consensus 208 ~~-~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~-dg~--i~iwd~~~~~~~------~~v~~~~ 274 (422)
-. +..| .|.+.|++.++. ..+....+.-..-.++|+ .+++..+. +|. |.+.|+.++... .....-.
T Consensus 298 f~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps 376 (425)
T COG0823 298 FTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPS 376 (425)
T ss_pred EEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCC
Confidence 44 4444 366667765554 333222222225667777 55555543 444 666666555411 2333445
Q ss_pred EecCCCEEEEEe
Q 014590 275 YNPCSRLVFAGT 286 (422)
Q Consensus 275 ~~~~~~~l~~g~ 286 (422)
+.|+|+.+...+
T Consensus 377 ~~~ng~~i~~~s 388 (425)
T COG0823 377 WAPNGRMIMFSS 388 (425)
T ss_pred cCCCCceEEEec
Confidence 556666555443
No 396
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.36 E-value=0.24 Score=48.49 Aligned_cols=98 Identities=14% Similarity=0.080 Sum_probs=58.8
Q ss_pred ccEEEEEecCC-CEEEEEc------CCC--cEEEEeCCCCccc----cceEeEEEecCCCEEEEEeCC------------
Q 014590 234 APVTSLSLSED-QLIISGS------SLG--SIAISGLSSDQRL----TGIKTLCYNPCSRLVFAGTTA------------ 288 (422)
Q Consensus 234 ~~v~~l~~~~~-~~l~s~~------~dg--~i~iwd~~~~~~~----~~v~~~~~~~~~~~l~~g~~d------------ 288 (422)
..+.+.+++|+ +.++... .|. .|.+.+....... .....-.|+|+|..+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 35678888877 4444433 233 4555564222111 347778999998877776532
Q ss_pred CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 289 GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 289 g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
+.+.+.++..++... ...+.|..+. |||||..++... +|.|++
T Consensus 430 gql~~~~vd~ge~~~---~~~g~Issl~-wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 430 GQLARTPVDASAVAS---RVPGPISELQ-LSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred ceEEEEeccCchhhh---ccCCCcCeEE-ECCCCCEEEEEE-CCEEEE
Confidence 233333444333322 2245699999 999999888765 466766
No 397
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.35 E-value=0.57 Score=40.16 Aligned_cols=181 Identities=14% Similarity=0.098 Sum_probs=105.9
Q ss_pred eEEEeeeCCCceee--EEEecCCCeEE-EecC--CeEEEEECCCCceee--ecCCCceeeeEEEeeeCCe-EEEecCCCe
Q 014590 143 KCVEEYSLPNAASL--VDFDFDESKIV-GLIG--TRICIWRRNGLRSVF--PSREGTFMKGLCMRYFDPE-AVVGCEDGT 214 (422)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~~l~-~~~~--~~i~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-l~~~~~d~~ 214 (422)
+.+.++.+...... +.|..++..+- ++.- ..|+.+|+.+++... ......+...++ ..++. ..-.-.++.
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit--~~~d~l~qLTWk~~~ 111 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGIT--ILGDKLYQLTWKEGT 111 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEE--EETTEEEEEESSSSE
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEE--EECCEEEEEEecCCe
Confidence 55667776555444 55655555554 3333 479999999987542 222222322233 23444 445567899
Q ss_pred EEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEE
Q 014590 215 ARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLV 282 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l 282 (422)
..+||..+-+.+.++.- .+.=+.++. .++.++.......+.++|..+.+.. ..++.+.+- +|...
T Consensus 112 ~f~yd~~tl~~~~~~~y-~~EGWGLt~-dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~Iy 188 (264)
T PF05096_consen 112 GFVYDPNTLKKIGTFPY-PGEGWGLTS-DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIY 188 (264)
T ss_dssp EEEEETTTTEEEEEEE--SSS--EEEE-CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEE
T ss_pred EEEEccccceEEEEEec-CCcceEEEc-CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEE
Confidence 99999999988888864 345577875 4555555555678999998776554 456666664 56555
Q ss_pred EEEeCCCeEEEEECCCCeeeeeecc---------------CCCceeeeeeEecCCCEEEEEe
Q 014590 283 FAGTTAGYASCWDLRTMKSLWETRI---------------SPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 283 ~~g~~dg~i~iwd~~~~~~~~~~~~---------------~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
|=.=....|...|..+|+.+..+.. ...-.+.|+ +.|..+.+...+
T Consensus 189 ANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIA-yd~~~~~l~vTG 249 (264)
T PF05096_consen 189 ANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIA-YDPETDRLFVTG 249 (264)
T ss_dssp EEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEE-EETTTTEEEEEE
T ss_pred EEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEe-EeCCCCEEEEEe
Confidence 5555667788889999987654321 135678999 887776554443
No 398
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.32 E-value=0.91 Score=42.17 Aligned_cols=135 Identities=15% Similarity=0.201 Sum_probs=79.3
Q ss_pred eEEEEecCCeEEEEEcCCCe-----EEEeeeCCCceeeEEEe---c--CCCeEEEecCCeEEEEECCCC--c------e-
Q 014590 124 LILTGVGDKVMRLWSLEGYK-----CVEEYSLPNAASLVDFD---F--DESKIVGLIGTRICIWRRNGL--R------S- 184 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~---~--~~~~l~~~~~~~i~~w~~~~~--~------~- 184 (422)
.++.||..|.++|++...+. .+-+.+....+.-++.- + +...|+.-.-..+.+|.+... . .
T Consensus 39 ~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~~~ 118 (418)
T PF14727_consen 39 KIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQYQ 118 (418)
T ss_pred EEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcEEE
Confidence 99999999999999986543 33333333333333322 2 334566778888888887321 1 1
Q ss_pred ---eeecCCCceeeeEEEeeeCC-----eEEEecCCCeEEEEeCCCcceeeeeec--CCccEEEEEecCC-CEEEEEcCC
Q 014590 185 ---VFPSREGTFMKGLCMRYFDP-----EAVVGCEDGTARVFDMYSRKCSQIIRM--HCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~~~~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
++...-......++.-+++. .+++-+.||.+.+++-+.-.....+.. ..+| +++.+. +.|++++.+
T Consensus 119 L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgP---l~Y~~~tDsfvt~sss 195 (418)
T PF14727_consen 119 LELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGP---LCYCPRTDSFVTASSS 195 (418)
T ss_pred EEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcC---eEEeecCCEEEEecCc
Confidence 11111122223344444432 388889999999999654432333322 2333 556655 778888888
Q ss_pred CcEEEEeC
Q 014590 254 GSIAISGL 261 (422)
Q Consensus 254 g~i~iwd~ 261 (422)
..+.-|..
T Consensus 196 ~~l~~Yky 203 (418)
T PF14727_consen 196 WTLECYKY 203 (418)
T ss_pred eeEEEecH
Confidence 78877764
No 399
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.30 E-value=0.83 Score=41.50 Aligned_cols=232 Identities=13% Similarity=0.048 Sum_probs=106.5
Q ss_pred EcCCCeEEEeeeCCCce------eeEEEecCCCeEE-E-ecC--CeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeE
Q 014590 138 SLEGYKCVEEYSLPNAA------SLVDFDFDESKIV-G-LIG--TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEA 206 (422)
Q Consensus 138 d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~-~-~~~--~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 206 (422)
|..||..+..+..+... .--+|..||+.|+ + ..+ ..+.+.|+.+++.. +....+.......+++.+..+
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~ 95 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL 95 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence 56777766666543321 1247788998887 3 334 46777788888744 222222222234555666665
Q ss_pred EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec--CCCEEEEEcC-----------------------CCcEEEEeC
Q 014590 207 VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS--EDQLIISGSS-----------------------LGSIAISGL 261 (422)
Q Consensus 207 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~-----------------------dg~i~iwd~ 261 (422)
+-...+..++-.|+++.+....+......+-...+. .+...++|.. ...|.-.|+
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 544455688888999988766676666666555554 3333333321 124555677
Q ss_pred CCCccc------cceEeEEEecCCCEEEEEeCCC-----eEEEEECCC-CeeeeeeccC-CCceeeeeeEecCCCEEEEE
Q 014590 262 SSDQRL------TGIKTLCYNPCSRLVFAGTTAG-----YASCWDLRT-MKSLWETRIS-PNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 262 ~~~~~~------~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~-~~~~~~~~~~-~~~v~~l~~~s~~~~~l~s~ 328 (422)
.+|+.. ..+..+.|+|....+++-+..| .-+||-+++ +...+.+..+ ...+..=.||.|||..|.--
T Consensus 176 ~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~ 255 (386)
T PF14583_consen 176 KTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYD 255 (386)
T ss_dssp TT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEE
T ss_pred CCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEE
Confidence 776654 6778899999776666554332 124554432 3333333332 23344444799999966542
Q ss_pred e-----cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeec
Q 014590 329 G-----IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEG 371 (422)
Q Consensus 329 ~-----~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~ 371 (422)
+ .+..|.-+|+.+++........ ...-...+.||.+.+.++
T Consensus 256 ~~~~~~~~~~i~~~d~~t~~~~~~~~~p--~~~H~~ss~Dg~L~vGDG 301 (386)
T PF14583_consen 256 SYTPGGQDFWIAGYDPDTGERRRLMEMP--WCSHFMSSPDGKLFVGDG 301 (386)
T ss_dssp EEETTT--EEEEEE-TTT--EEEEEEE---SEEEEEE-TTSSEEEEEE
T ss_pred eecCCCCceEEEeeCCCCCCceEEEeCC--ceeeeEEcCCCCEEEecC
Confidence 2 3456777888887654332221 122333445555544443
No 400
>PHA03098 kelch-like protein; Provisional
Probab=96.21 E-value=0.65 Score=45.37 Aligned_cols=176 Identities=10% Similarity=0.019 Sum_probs=85.3
Q ss_pred cCC-eEEEEecCC------eEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecC-----CeEEEEECCCCceee
Q 014590 121 KRG-LILTGVGDK------VMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIG-----TRICIWRRNGLRSVF 186 (422)
Q Consensus 121 ~~~-~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~-----~~i~~w~~~~~~~~~ 186 (422)
.++ .++.||.++ .+..||..+.+....-..+... .......++..++ |+.+ ..+..||..+..-..
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 372 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE 372 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence 344 666666542 5778888877664332222111 1222333555555 5544 357788887765322
Q ss_pred ecC-CCceeeeEEEeeeCCeEEEecCC------CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCCC---
Q 014590 187 PSR-EGTFMKGLCMRYFDPEAVVGCED------GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSLG--- 254 (422)
Q Consensus 187 ~~~-~~~~~~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~dg--- 254 (422)
... .............+...+.|+.+ +.+..||+.+++-.. .+..... -.+++...+..++.|+.++
T Consensus 373 ~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~ 451 (534)
T PHA03098 373 EPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY-GGCAIYHDGKIYVIGGISYIDN 451 (534)
T ss_pred CCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc-CceEEEECCEEEEECCccCCCC
Confidence 111 11111111222233335556532 468889987654222 1111111 1123333556667776432
Q ss_pred -----cEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCC
Q 014590 255 -----SIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTM 299 (422)
Q Consensus 255 -----~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~ 299 (422)
.+..||..+++-. .....+. -+++.++.|+.+ +.+.+||..+.
T Consensus 452 ~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 452 IKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 3888898776543 1111122 256666666643 35677776654
No 401
>PHA03098 kelch-like protein; Provisional
Probab=96.20 E-value=0.71 Score=45.14 Aligned_cols=94 Identities=9% Similarity=0.162 Sum_probs=48.6
Q ss_pred eEEEecCC------CeEEEEeCCCcceeee--eecCCccEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCccc----
Q 014590 205 EAVVGCED------GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSEDQLIISGSSL-----GSIAISGLSSDQRL---- 267 (422)
Q Consensus 205 ~l~~~~~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~---- 267 (422)
.++.|+.+ ..+..||..+++-... +...... .+++...+..++.|+.+ ..+..||..+++-.
T Consensus 297 lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~-~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 375 (534)
T PHA03098 297 IYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKN-PGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPP 375 (534)
T ss_pred EEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCccccc-ceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceeeCCC
Confidence 35555543 2577888876653221 1111111 22333356777777765 34677887765533
Q ss_pred ---cceEeEEEecCCCEEEEEeCC------CeEEEEECCCC
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTA------GYASCWDLRTM 299 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~~~~ 299 (422)
......+..-+++..+.|+.+ ..+..||+.+.
T Consensus 376 lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~ 416 (534)
T PHA03098 376 LIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTN 416 (534)
T ss_pred cCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence 111111112356666777632 35788898764
No 402
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=96.11 E-value=1.1 Score=41.34 Aligned_cols=189 Identities=15% Similarity=0.067 Sum_probs=113.4
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCC---ceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCc-eee
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGT-FMK 195 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~-~~~ 195 (422)
..++.++.+..||.|.-.|.++++.+....... ....-.+..+|+.++++.++.+..+|..++..++...... ...
T Consensus 66 ~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~ 145 (370)
T COG1520 66 DGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYY 145 (370)
T ss_pred eeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEE
Confidence 356777777889999999999988775444332 1122222238887779999989999998777664433333 111
Q ss_pred eEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc---cEEEEEecCCCEEEEEcC--CCcEEEEeCCCCccc---
Q 014590 196 GLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA---PVTSLSLSEDQLIISGSS--LGSIAISGLSSDQRL--- 267 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~l~~~~~~~l~s~~~--dg~i~iwd~~~~~~~--- 267 (422)
.-........++.++.++.+...|..+|+.......... .+..-....+..++.+.. ++.+.-.|..+|...
T Consensus 146 ~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~ 225 (370)
T COG1520 146 ASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQ 225 (370)
T ss_pred ecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEeeee
Confidence 111112222355555789999999999988777553221 111100112345666655 667777788777765
Q ss_pred ---cceEe-----EEEecC-----CCEEEEEeCCCeEEEEECCCCeeeeeeccC
Q 014590 268 ---TGIKT-----LCYNPC-----SRLVFAGTTAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 268 ---~~v~~-----~~~~~~-----~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
..+.. ...... +..+..++.++.+...|..+++.++++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 226 KVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 01110 101011 123356677888999999999999888764
No 403
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.98 E-value=1.2 Score=40.48 Aligned_cols=227 Identities=11% Similarity=0.045 Sum_probs=106.5
Q ss_pred cceeeEEeeccccceeEEEe------cCC--eEEEEecCC--eEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-E
Q 014590 101 GRIDIDQWKAHSVGVDQCRM------KRG--LILTGVGDK--VMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-G 168 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~------~~~--~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~ 168 (422)
.+.++..|..+...-..+-| .|| +|+++..|| .+.+-|+++++..+.-.+..... ...++++.+.++ .
T Consensus 19 TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv 98 (386)
T PF14583_consen 19 TGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYV 98 (386)
T ss_dssp T--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEE
T ss_pred CCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEE
Confidence 34566677655554444544 456 555555555 56667889988877766653322 367778888887 6
Q ss_pred ecCCeEEEEECCCCce--eeecCCCceeeeEEEeeeCCeEEEec-----------------------CCCeEEEEeCCCc
Q 014590 169 LIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGC-----------------------EDGTARVFDMYSR 223 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------------~d~~i~iwd~~~~ 223 (422)
..+..+.-.|+++.+. ++....+-..........+...++|. ....|.-.|+.+|
T Consensus 99 ~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG 178 (386)
T PF14583_consen 99 KNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTG 178 (386)
T ss_dssp ETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT-
T ss_pred ECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCC
Confidence 6778999999998764 34444433322222212222222221 1234556678887
Q ss_pred ceeeeeecCCccEEEEEecCC--CEEEEEcC---CC-cEEEEeCCC-Cccc---------cceEeEEEecCCCEEEEEe-
Q 014590 224 KCSQIIRMHCAPVTSLSLSED--QLIISGSS---LG-SIAISGLSS-DQRL---------TGIKTLCYNPCSRLVFAGT- 286 (422)
Q Consensus 224 ~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~---dg-~i~iwd~~~-~~~~---------~~v~~~~~~~~~~~l~~g~- 286 (422)
+....+. -...+..+.++|. ..++-|-. +. .-+||-+++ +... ..+..=-|.|||..|.--+
T Consensus 179 ~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~ 257 (386)
T PF14583_consen 179 ERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSY 257 (386)
T ss_dssp -EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEE
T ss_pred ceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEee
Confidence 7655554 4567888999985 55555432 22 124554432 2211 4555566889998766432
Q ss_pred ----CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 287 ----TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 287 ----~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
.+..|.-+|+.+++....... .....+. .++||++++.=+.|
T Consensus 258 ~~~~~~~~i~~~d~~t~~~~~~~~~--p~~~H~~-ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 258 TPGGQDFWIAGYDPDTGERRRLMEM--PWCSHFM-SSPDGKLFVGDGGD 303 (386)
T ss_dssp ETTT--EEEEEE-TTT--EEEEEEE---SEEEEE-E-TTSSEEEEEE--
T ss_pred cCCCCceEEEeeCCCCCCceEEEeC--CceeeeE-EcCCCCEEEecCCC
Confidence 244577788888755432222 1223333 56888877654444
No 404
>KOG3926 consensus F-box proteins [Amino acid transport and metabolism]
Probab=95.93 E-value=0.0081 Score=50.20 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=45.8
Q ss_pred ccccccCHHHHHHHHcCC-ChHhHHHHHhhchhHHHhccCChhHHHHHHhhc
Q 014590 22 ATIESLNGDIICMIFSSL-GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH 72 (422)
Q Consensus 22 ~~~~~Lp~e~~~~i~~~l-~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~ 72 (422)
..+.+||.|+++.|+..| |..||..++++-...+.++++..+||++|+=++
T Consensus 200 ltl~dLP~e~vl~Il~rlsDh~dL~s~aqa~etl~~l~~e~~iWkkLcqfHF 251 (332)
T KOG3926|consen 200 LTLHDLPLECVLNILLRLSDHRDLESLAQAWETLAKLSEERRIWKKLCQFHF 251 (332)
T ss_pred CCcccchHHHHHHHHHHccCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 478899999999999877 999999999998889999999999999986554
No 405
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.88 E-value=0.42 Score=46.48 Aligned_cols=174 Identities=12% Similarity=0.099 Sum_probs=96.6
Q ss_pred CCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEEEecCCeEEEEECCCCceee--ecCCCceeeeEEEeeeCCeEE
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVF--PSREGTFMKGLCMRYFDPEAV 207 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 207 (422)
--.|+|++.. |+.+..+.-.+ ....+.|+.+...|+...+|++.+|++.+..... .+.+.....+.....+.+.++
T Consensus 63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa 141 (829)
T KOG2280|consen 63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA 141 (829)
T ss_pred ceeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence 4568888875 67766655433 5566899999999999999999999987655332 111222222333333444455
Q ss_pred EecCCCeEEEEeCCCcceeeeeec---CCccEEEEEec-CC-C--EEEEEc-CCCcEEEEeCC--CCccc------cceE
Q 014590 208 VGCEDGTARVFDMYSRKCSQIIRM---HCAPVTSLSLS-ED-Q--LIISGS-SLGSIAISGLS--SDQRL------TGIK 271 (422)
Q Consensus 208 ~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~l~~~-~~-~--~l~s~~-~dg~i~iwd~~--~~~~~------~~v~ 271 (422)
.-..+|.+.+-+-.....+..++. ...+-.|-... |+ + .++-.. ..+ ..+.... +.+.. ..+.
T Consensus 142 vlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ 220 (829)
T KOG2280|consen 142 VLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVV 220 (829)
T ss_pred EEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEE
Confidence 555566665543222212222221 11111222222 22 1 111100 000 0011111 11111 6688
Q ss_pred eEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 272 TLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
.+..||++++|+--..+|.|.+-+....+...++.
T Consensus 221 ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 221 KISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred EEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 89999999999999999999999888777776665
No 406
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.86 E-value=0.031 Score=33.76 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=30.1
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
...|..++ |+|...+||.++.+|.|.++.+ +++.+
T Consensus 11 ~~~v~~~~-w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 11 PSRVSCMS-WCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCcEEEEE-ECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 35688998 9999999999999999999998 56543
No 407
>PF06881 Elongin_A: RNA polymerase II transcription factor SIII (Elongin) subunit A; InterPro: IPR010684 This family represents a conserved region within RNA polymerase II transcription factor SIII (Elongin) subunit A. In mammals, the Elongin complex activates elongation by RNA polymerase II by suppressing transient pausing of the polymerase at many sites within transcription units. Elongin is a heterotrimer composed of A, B, and C subunits of 110, 18, and 15 kilodaltons, respectively. Subunit A has been shown to function as the transcriptionally active component of Elongin [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus, 0016021 integral to membrane
Probab=95.81 E-value=0.028 Score=41.43 Aligned_cols=65 Identities=14% Similarity=0.004 Sum_probs=49.0
Q ss_pred cccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCC----CC-CCCChHHHHHHH
Q 014590 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFS----NT-SGSSMRLHLEEL 89 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~----~~-~~~~~~~~~~~~ 89 (422)
.+-.+|.+++.-|+..+.|..|.++..-|.... -.++.+|+.+|.+.++.. .+ ...+|+..+..+
T Consensus 3 dvG~~py~ll~piL~~~~~~QL~~iE~~np~l~--~~tdeLW~~~i~rdFp~~~~~~~~~~~~~Wr~~Y~~~ 72 (109)
T PF06881_consen 3 DVGDVPYHLLRPILEKCSPEQLRRIEDNNPHLI--EDTDELWKKLIKRDFPEESKRQKPKEPESWRELYEKL 72 (109)
T ss_pred ccCCCCHHHHHHHHccCCHHHHHHHHHhCCCcc--hhhHHHHHHHHHhHCcChhhcccccccchHHHHHHHH
Confidence 356799999999999999999999999884433 347889999999999542 12 335666555443
No 408
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=95.81 E-value=0.0018 Score=58.81 Aligned_cols=132 Identities=12% Similarity=0.149 Sum_probs=94.7
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCCCc-eeeecCCCceeeeEEEe
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLR-SVFPSREGTFMKGLCMR 200 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~-~~~~~~~~~~~~~~~~~ 200 (422)
-++.++.+-.+..||-. ++.......+.....+++..++..++ +-..+.+.+|++.+.. ..+.....+......+.
T Consensus 48 nlavaca~tiv~~YD~a-gq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~ws 126 (615)
T KOG2247|consen 48 NLAVACANTIVIYYDKA-GQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWS 126 (615)
T ss_pred ceehhhhhhHHHhhhhh-cceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhc
Confidence 67777788888899854 56655555555555578888888776 7888999999998754 22333333333345566
Q ss_pred eeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcE
Q 014590 201 YFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSI 256 (422)
Q Consensus 201 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i 256 (422)
...+.++.|...|.+.|++..+.+.+.....|...+.++++.+.++.+.++.|..+
T Consensus 127 Kg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L 182 (615)
T KOG2247|consen 127 KGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTL 182 (615)
T ss_pred cCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHH
Confidence 66666888888999999998777666555558889999999888788877776543
No 409
>PHA02790 Kelch-like protein; Provisional
Probab=95.54 E-value=1.8 Score=41.54 Aligned_cols=93 Identities=9% Similarity=-0.074 Sum_probs=48.3
Q ss_pred EEEecCC-----CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCC--CcEEEEeCCCCccc------cce
Q 014590 206 AVVGCED-----GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSL--GSIAISGLSSDQRL------TGI 270 (422)
Q Consensus 206 l~~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~d--g~i~iwd~~~~~~~------~~v 270 (422)
+++|+.+ .++..||..+++-.. .+...... .+++...+...+.|+.+ ..+..||..+++-. .+.
T Consensus 275 yviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r 353 (480)
T PHA02790 275 YLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPR 353 (480)
T ss_pred EEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCC
Confidence 4566543 357778887765322 22111111 22333355677777754 35778887655432 111
Q ss_pred -EeEEEecCCCEEEEEeCCC---eEEEEECCCC
Q 014590 271 -KTLCYNPCSRLVFAGTTAG---YASCWDLRTM 299 (422)
Q Consensus 271 -~~~~~~~~~~~l~~g~~dg---~i~iwd~~~~ 299 (422)
...+..-+|+..+.|+.++ .+..||..+.
T Consensus 354 ~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 354 CNPAVASINNVIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred cccEEEEECCEEEEecCcCCCCccEEEEeCCCC
Confidence 1111223677777777543 4677887754
No 410
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=95.27 E-value=0.93 Score=34.27 Aligned_cols=106 Identities=5% Similarity=-0.021 Sum_probs=69.4
Q ss_pred eEEEEecCCeEEEEEcCCC--------eEEEeeeCCCceeeEEEec-----CCCeEEEecCCeEEEEECCCCceeeecCC
Q 014590 124 LILTGVGDKVMRLWSLEGY--------KCVEEYSLPNAASLVDFDF-----DESKIVGLIGTRICIWRRNGLRSVFPSRE 190 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~i~~w~~~~~~~~~~~~~ 190 (422)
.|+.+..-|+|.|.+.... ..+..+.....+.+++--+ +...|+.+....+..||+.....++...-
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~Fyke~ 91 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLFYKEV 91 (136)
T ss_pred eEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhhhhhC
Confidence 7788888899999987632 3456666666776665443 34567788889999999999887765444
Q ss_pred CceeeeEEEeeeCC---eEEEecCCCeEEEEeCCCcceeeee
Q 014590 191 GTFMKGLCMRYFDP---EAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 191 ~~~~~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
..-+..+.+-..+. .++..+.+..|.-+|.+..+..++.
T Consensus 92 ~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 92 PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 33333444433332 2666666778888887655555443
No 411
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.20 E-value=2.6 Score=41.41 Aligned_cols=170 Identities=12% Similarity=0.055 Sum_probs=88.5
Q ss_pred ceeeEEEecCCCeEE-Ee------cCC--eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEec------------C
Q 014590 153 AASLVDFDFDESKIV-GL------IGT--RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGC------------E 211 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~------~~~--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~ 211 (422)
.....+++++|+.++ .. .+. .+.+++..+....+. .+.....-.|++++..+++.. .
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt--~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~ 428 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVL--EGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPA 428 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeee--cCCCCCCceECCCCCceEEEecCcceEEEeccCC
Confidence 345588999999987 32 133 555556533322221 122233455666655544443 2
Q ss_pred CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEE---EeCCCCccc------------cceEeEEE
Q 014590 212 DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAI---SGLSSDQRL------------TGIKTLCY 275 (422)
Q Consensus 212 d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~i---wd~~~~~~~------------~~v~~~~~ 275 (422)
.+.+.+.++..++... ...+.|..+.|+|| ..++... ++.|.+ -....|... ..+..+.|
T Consensus 429 ~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W 504 (591)
T PRK13616 429 TGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDW 504 (591)
T ss_pred CceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceE
Confidence 2344444555444333 23467999999987 5444433 467776 443444311 33688999
Q ss_pred ecCCCEEEEEeCCCeEEEEECCC-Ceeeeeecc--CCCceeeeeeEecCCCEEEEEecCC
Q 014590 276 NPCSRLVFAGTTAGYASCWDLRT-MKSLWETRI--SPNVVYSLQHLQNDTSTLVVGGIDG 332 (422)
Q Consensus 276 ~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~--~~~~v~~l~~~s~~~~~l~s~~~dg 332 (422)
.+++.++ ++..++.-.+|.+.- |.....+.. ....+.+++ -++ ..++....+|
T Consensus 505 ~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~va-a~~--~~iyv~~~~g 560 (591)
T PRK13616 505 RTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVA-ASP--STVYVTDARA 560 (591)
T ss_pred ecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEe-cCC--ceEEEEcCCc
Confidence 9888854 555544444444331 222222222 134566666 443 2355555555
No 412
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.07 E-value=0.35 Score=49.23 Aligned_cols=116 Identities=12% Similarity=0.035 Sum_probs=75.3
Q ss_pred EEEecCCCeEEEEeCCCccee-----eeee------cCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-----
Q 014590 206 AVVGCEDGTARVFDMYSRKCS-----QIIR------MHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~-----~~~~------~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~----- 267 (422)
++..+.+-.|..+|+++-..- ..+. .......++.|+|. ...+....|+.|++..+......
T Consensus 117 v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p 196 (1405)
T KOG3630|consen 117 VVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP 196 (1405)
T ss_pred EEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC
Confidence 344444557889998653211 1111 11234567788875 56677788999988876533222
Q ss_pred --cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC----CCceeeeeeEecCC
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS----PNVVYSLQHLQNDT 322 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~l~~~s~~~ 322 (422)
...++++|+|.|..+++|...|++.-|... ++...++.+. ...|.+|.|+.+..
T Consensus 197 ~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~e 256 (1405)
T KOG3630|consen 197 VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQE 256 (1405)
T ss_pred cccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEeccee
Confidence 778999999999999999999999888654 3333333221 36789998655443
No 413
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=94.86 E-value=3.2 Score=38.34 Aligned_cols=191 Identities=17% Similarity=0.156 Sum_probs=112.9
Q ss_pred EecCCCeEEEecCCeEEEEECCCCceeeecCCCc---eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-
Q 014590 159 FDFDESKIVGLIGTRICIWRRNGLRSVFPSREGT---FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA- 234 (422)
Q Consensus 159 ~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~- 234 (422)
...++..+++..+|.+.-.|.+++..++...... ....-.+. .+..++.++.++.+..+|..+|+.+........
T Consensus 65 ~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~-~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~ 143 (370)
T COG1520 65 ADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILG-SDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSP 143 (370)
T ss_pred EeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEE-eCCeEEEecccceEEEEECCCCcEEEEEecCCCe
Confidence 4456666778888888888888887654322221 11111111 134488999999999999989999888876551
Q ss_pred cEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc--cceEe-EEEe------cCCCEEEEEeC--CCeEEEEECCCCeeee
Q 014590 235 PVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL--TGIKT-LCYN------PCSRLVFAGTT--AGYASCWDLRTMKSLW 303 (422)
Q Consensus 235 ~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~v~~-~~~~------~~~~~l~~g~~--dg~i~iwd~~~~~~~~ 303 (422)
.+..-.+..+..+..++.++.+.-.|..+|+.. ..+.. +..+ .....++.+.. ++.+.-.|..+|....
T Consensus 144 ~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w 223 (370)
T COG1520 144 YYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKW 223 (370)
T ss_pred EEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEee
Confidence 111111212355666667788888888877765 00100 1111 12234555555 6677778888888776
Q ss_pred eeccCC----Cce--e-eee--eEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 304 ETRISP----NVV--Y-SLQ--HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 304 ~~~~~~----~~v--~-~l~--~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
..+.+. ..+ . .+. -.--+ .-+..++.++.+...|..+|+.+..+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 224 SQKVSQTIGRTAISTTPAVDGGPVYVD-GGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeeecccCcccccccccccCceEEEC-CcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 643211 111 0 110 01111 23456777888999999999999888774
No 414
>PHA02790 Kelch-like protein; Provisional
Probab=94.82 E-value=4 Score=39.25 Aligned_cols=142 Identities=10% Similarity=-0.064 Sum_probs=69.1
Q ss_pred cCC-eEEEEecCC-----eEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-EecC--CeEEEEECCCCceeeecCC
Q 014590 121 KRG-LILTGVGDK-----VMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIG--TRICIWRRNGLRSVFPSRE 190 (422)
Q Consensus 121 ~~~-~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~--~~i~~w~~~~~~~~~~~~~ 190 (422)
.++ .++.||.++ ++..||..+++....-..+.... ......++...+ |+.+ ..+..||..++.......-
T Consensus 270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l 349 (480)
T PHA02790 270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL 349 (480)
T ss_pred ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence 344 667777543 57778888776544332222221 222334555555 5432 4678888776653221111
Q ss_pred CceeeeEEEee-eCCeEEEecCC---CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCC
Q 014590 191 GTFMKGLCMRY-FDPEAVVGCED---GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 191 ~~~~~~~~~~~-~~~~l~~~~~d---~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~ 264 (422)
.......+... .+...+.|+.+ ..+..||+.+.+-.. .+...... .+++...+.+.+.|+ .+.+||..++
T Consensus 350 ~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~-~~~~~~~~~IYv~GG---~~e~ydp~~~ 425 (480)
T PHA02790 350 LKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK-SCALVFGRRLFLVGR---NAEFYCESSN 425 (480)
T ss_pred CCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc-ceEEEECCEEEEECC---ceEEecCCCC
Confidence 11111222233 34445666654 347788887654221 11111111 123333455666653 5678888766
Q ss_pred cc
Q 014590 265 QR 266 (422)
Q Consensus 265 ~~ 266 (422)
+-
T Consensus 426 ~W 427 (480)
T PHA02790 426 TW 427 (480)
T ss_pred cE
Confidence 54
No 415
>PF13013 F-box-like_2: F-box-like domain
Probab=94.65 E-value=0.057 Score=39.29 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=27.9
Q ss_pred cccccCHHHHHHHHcCCChHhHHHHHhhch
Q 014590 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCK 52 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~ 52 (422)
.+.+||.||+..||.+++..++..+...|+
T Consensus 21 tl~DLP~ELl~~I~~~C~~~~l~~l~~~~~ 50 (109)
T PF13013_consen 21 TLLDLPWELLQLIFDYCNDPILLALSRTCR 50 (109)
T ss_pred chhhChHHHHHHHHhhcCcHHHHHHHHHHH
Confidence 588899999999999999999999888887
No 416
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.46 E-value=0.67 Score=43.10 Aligned_cols=137 Identities=12% Similarity=0.163 Sum_probs=87.8
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCC--------CeEEEecCCeEEEEECCCC--cee---eecCC
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE--------SKIVGLIGTRICIWRRNGL--RSV---FPSRE 190 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~i~~w~~~~~--~~~---~~~~~ 190 (422)
.+..|+....+.--|++-|+.+..+..+..+ ++.|.|+. ..|+|-++..|.-.|..-. +.. .....
T Consensus 482 i~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~ 560 (776)
T COG5167 482 IYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYK 560 (776)
T ss_pred EEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhcc
Confidence 3445555666777788889999999888766 77787753 4577777777766665432 211 11111
Q ss_pred CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC
Q 014590 191 GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~ 262 (422)
+...-.......+.++++++..|.|++||--.......+++....|..+....+ .++++ .....+.+-|++
T Consensus 561 tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ila-TCk~yllL~d~~ 632 (776)
T COG5167 561 TKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILA-TCKNYLLLTDVP 632 (776)
T ss_pred ccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEE-eecceEEEEecc
Confidence 111112233344566999999999999996544444556677788888888865 44443 345677787765
No 417
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.32 E-value=2.5 Score=34.69 Aligned_cols=182 Identities=10% Similarity=0.069 Sum_probs=95.6
Q ss_pred eEEEeeeCCCceeeEEEecCCCeEE-Ee---cCCeEEEEECCCCceeeecCCC-ceeeeEEEeeeCCe-EEEecCCCeEE
Q 014590 143 KCVEEYSLPNAASLVDFDFDESKIV-GL---IGTRICIWRRNGLRSVFPSREG-TFMKGLCMRYFDPE-AVVGCEDGTAR 216 (422)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~i~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-l~~~~~d~~i~ 216 (422)
+.++++.+......-.+-.++.+++ +. ....|++||+.+++.++...-. ...-.-.+...++. -.-.-.+|.-.
T Consensus 35 evi~~yphDs~sfTQGL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf 114 (262)
T COG3823 35 EVIRTYPHDSTSFTQGLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAF 114 (262)
T ss_pred EEEEeccCchhhhhcceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeE
Confidence 3444444433322223333344555 22 2467999999988866443322 11111111222232 23345677888
Q ss_pred EEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEE
Q 014590 217 VFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 217 iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~ 284 (422)
.+|..+-+++..+.- .+.=+.++....+ ++.+....+++.-|..+.... ..++.+.|- +|...|-
T Consensus 115 ~~d~~t~~~lg~~~y-~GeGWgLt~d~~~-LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyAN 191 (262)
T COG3823 115 KYDADTLEELGRFSY-EGEGWGLTSDDKN-LIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYAN 191 (262)
T ss_pred EEChHHhhhhccccc-CCcceeeecCCcc-eEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEe
Confidence 899888888777653 4455677664334 555555556777666554333 333334442 4544444
Q ss_pred EeCCCeEEEEECCCCeeeeeec------------cCCCceeeeeeEecCC-CEEEEE
Q 014590 285 GTTAGYASCWDLRTMKSLWETR------------ISPNVVYSLQHLQNDT-STLVVG 328 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~~~~~~~------------~~~~~v~~l~~~s~~~-~~l~s~ 328 (422)
.=.+..|...|..+|+.+..+. .|.+..+.++ +.|++ +++++|
T Consensus 192 Vw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA-~~~~~~r~~iTG 247 (262)
T COG3823 192 VWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIA-HDPQQDRFLITG 247 (262)
T ss_pred eeeecceEEEcCCCCcEEEEEEccCCchhcCcccccccccccee-ecCcCCeEEEec
Confidence 4444455556666665543321 2345677888 76766 455555
No 418
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=94.17 E-value=0.065 Score=52.77 Aligned_cols=116 Identities=11% Similarity=0.163 Sum_probs=72.6
Q ss_pred eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccccceEeEEEecCCCEEEE
Q 014590 205 EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRLTGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~v~~~~~~~~~~~l~~ 284 (422)
++..+-.+++|++....+.. ...+++|...+..+++...+++...+ ++|||..++.
T Consensus 197 ~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~-----------------------lSpDGtv~a~ 252 (1283)
T KOG1916|consen 197 YICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLAS-----------------------LSPDGTVFAW 252 (1283)
T ss_pred eeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhhee-----------------------eCCCCcEEEE
Confidence 36677788899987765433 35567799888888887543333222 4788888888
Q ss_pred EeCCCeEEEEECC-----CCeeeeeeccCC-CceeeeeeEecCC---------CEEEEEe-cCCeEEEEECCCCceE
Q 014590 285 GTTAGYASCWDLR-----TMKSLWETRISP-NVVYSLQHLQNDT---------STLVVGG-IDGVLRVLDQNTGEVL 345 (422)
Q Consensus 285 g~~dg~i~iwd~~-----~~~~~~~~~~~~-~~v~~l~~~s~~~---------~~l~s~~-~dg~v~vwd~~~~~~~ 345 (422)
++.||.++.|.+. .-.++...+.|. .+-.|.- |..+. .++++++ .+..+++|.....+|+
T Consensus 253 a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 253 AISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eecCCccceeeeeeeccccHhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 8888887777654 234455556665 2222222 22111 1445554 3567999998877776
No 419
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=94.13 E-value=5.2 Score=37.63 Aligned_cols=191 Identities=12% Similarity=0.046 Sum_probs=98.7
Q ss_pred eEEEecCCCeEE-E-ecCC----eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-----------CCeEEEE
Q 014590 156 LVDFDFDESKIV-G-LIGT----RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-----------DGTARVF 218 (422)
Q Consensus 156 ~~~~~~~~~~l~-~-~~~~----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------d~~i~iw 218 (422)
...++|++++++ + +.+| .+++.|+++++.+...........+.|..++..++.... ...|..|
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~ 207 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRH 207 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEE
Confidence 368899999988 3 3333 599999999976544333332223677777666544432 2347888
Q ss_pred eCCCcce--eeeeecCCcc--EEEEEecCC-CEEEEE-cC--C-CcEEEEeCCCC-----ccc------cceEeEEEecC
Q 014590 219 DMYSRKC--SQIIRMHCAP--VTSLSLSED-QLIISG-SS--L-GSIAISGLSSD-----QRL------TGIKTLCYNPC 278 (422)
Q Consensus 219 d~~~~~~--~~~~~~~~~~--v~~l~~~~~-~~l~s~-~~--d-g~i~iwd~~~~-----~~~------~~v~~~~~~~~ 278 (422)
.+.+... ...+...... ...+..+++ ++++.. .. + ..+.+.|+..+ ... ..+....-+..
T Consensus 208 ~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~ 287 (414)
T PF02897_consen 208 KLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHG 287 (414)
T ss_dssp ETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEET
T ss_pred ECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccC
Confidence 8866643 2344443333 556777766 554433 22 2 45888888775 111 22322222223
Q ss_pred CCEEEEEe---CCCeEEEEECCCCee---eeeeccCCC--ceeeeeeEecCCCE-EEEEecCC--eEEEEECCCCceEEE
Q 014590 279 SRLVFAGT---TAGYASCWDLRTMKS---LWETRISPN--VVYSLQHLQNDTST-LVVGGIDG--VLRVLDQNTGEVLSR 347 (422)
Q Consensus 279 ~~~l~~g~---~dg~i~iwd~~~~~~---~~~~~~~~~--~v~~l~~~s~~~~~-l~s~~~dg--~v~vwd~~~~~~~~~ 347 (422)
+.+++... .++.|.-.++.+... ...+..+.. .+..+. ..+.+ ++....++ .|+++++..+.....
T Consensus 288 ~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~---~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~ 364 (414)
T PF02897_consen 288 DRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVS---LFKDYLVLSYRENGSSRLRVYDLDDGKESRE 364 (414)
T ss_dssp TEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEE---EETTEEEEEEEETTEEEEEEEETT-TEEEEE
T ss_pred CEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEE---EECCEEEEEEEECCccEEEEEECCCCcEEee
Confidence 33333332 345677777776542 224444443 344444 33444 44444454 577888873444444
Q ss_pred ee
Q 014590 348 CV 349 (422)
Q Consensus 348 ~~ 349 (422)
+.
T Consensus 365 ~~ 366 (414)
T PF02897_consen 365 IP 366 (414)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 420
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.12 E-value=1.9 Score=42.21 Aligned_cols=70 Identities=11% Similarity=0.182 Sum_probs=48.5
Q ss_pred eEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-cCCCceeeeeeE-ecCCCEEEEEecCCeEEEEEC
Q 014590 270 IKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR-ISPNVVYSLQHL-QNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~-s~~~~~l~s~~~dg~v~vwd~ 339 (422)
+.-+.-+.-++..++-+....+.|||.+.+....+-. ...+.|..+.|. .|+++.+++.|....|.++.-
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 3334444445555555555679999999887554433 345789999843 488999999999999999854
No 421
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.59 E-value=0.75 Score=38.77 Aligned_cols=69 Identities=14% Similarity=0.088 Sum_probs=47.5
Q ss_pred eeEEEecCCeEEEEecCCeEEEEEcCCCeEEEee---------------eCCCceeeEEEecCCCeEEEecCCeEEEEEC
Q 014590 115 VDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEY---------------SLPNAASLVDFDFDESKIVGLIGTRICIWRR 179 (422)
Q Consensus 115 v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~ 179 (422)
+..+...+.+|+.-..+|.+++||+.+++.+..- .....+..+.++.+|.-++.-.+|..+.|+.
T Consensus 15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~ 94 (219)
T PF07569_consen 15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSP 94 (219)
T ss_pred eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecc
Confidence 3444445668999999999999999998775432 1123344467777777777666778888876
Q ss_pred CCCc
Q 014590 180 NGLR 183 (422)
Q Consensus 180 ~~~~ 183 (422)
+-+.
T Consensus 95 ~L~~ 98 (219)
T PF07569_consen 95 DLGC 98 (219)
T ss_pred ccce
Confidence 5443
No 422
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.57 E-value=6.6 Score=36.92 Aligned_cols=131 Identities=10% Similarity=0.020 Sum_probs=85.3
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--------CEEEEEcCCCcEEEEeCCC-Cccc------cce
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--------QLIISGSSLGSIAISGLSS-DQRL------TGI 270 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--------~~l~s~~~dg~i~iwd~~~-~~~~------~~v 270 (422)
+..|.....++-.|++.|+.+.....|..- -+.+.|. ..-+.|-.+..|.-.|.+- |..+ ..+
T Consensus 483 ~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~ 560 (776)
T COG5167 483 YLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYK 560 (776)
T ss_pred EecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhcc
Confidence 445666667777889999998888777654 4566652 2334455555665556543 2222 222
Q ss_pred EeEEEe----cCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 271 KTLCYN----PCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 271 ~~~~~~----~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+.-.|+ ....++|+|+..|-|++||--.-+....+.+-...|..+. .+.+|+++++.+.. .+.+-|++
T Consensus 561 tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~id-vta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 561 TKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHID-VTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred ccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeE-eecCCcEEEEeecc-eEEEEecc
Confidence 222222 2446899999999999999654444445666667888898 88999988877754 47777764
No 423
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.55 E-value=5.8 Score=39.42 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=69.3
Q ss_pred ceEeEEEec--CCCEEEEEeCCCeEEEEECCC-------C-------------eeeeeeccCCCceeeeeeEe--cCCCE
Q 014590 269 GIKTLCYNP--CSRLVFAGTTAGYASCWDLRT-------M-------------KSLWETRISPNVVYSLQHLQ--NDTST 324 (422)
Q Consensus 269 ~v~~~~~~~--~~~~l~~g~~dg~i~iwd~~~-------~-------------~~~~~~~~~~~~v~~l~~~s--~~~~~ 324 (422)
.|+.|.... ....|+++..||.|.+|.+.+ . ++...+.. ...+++++ +. ...++
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLd-Ih~~~~~rl 179 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLD-IHDYKKSRL 179 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEE-EEecCcceE
Confidence 344444332 446888999999999996632 0 01122222 24688888 76 66678
Q ss_pred EEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-----cCE
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-----GMK 399 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-----~~~ 399 (422)
||+++....|.||-...... +.. .... ..|...|-+|+| ++.
T Consensus 180 IAVSsNs~~VTVFaf~l~~~-r~~-~~~s-------------------------------~~~~hNIP~VSFl~~~~d~~ 226 (717)
T PF08728_consen 180 IAVSSNSQEVTVFAFALVDE-RFY-HVPS-------------------------------HQHSHNIPNVSFLDDDLDPN 226 (717)
T ss_pred EEEecCCceEEEEEEecccc-ccc-cccc-------------------------------cccccCCCeeEeecCCCCCc
Confidence 88888788888876543210 000 0000 114457888888 222
Q ss_pred ---EEEEEeCCCeEEEEEc
Q 014590 400 ---KVVTTHNSKYIRLWKF 415 (422)
Q Consensus 400 ---~l~s~s~Dg~i~iW~~ 415 (422)
.+++++-.|.+.+|++
T Consensus 227 G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 227 GHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cceEEEEEeccCcEEEEEE
Confidence 7888999999999888
No 424
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.52 E-value=6.3 Score=36.54 Aligned_cols=175 Identities=10% Similarity=0.044 Sum_probs=80.9
Q ss_pred eEEEEe-cCCeEEEEEcCC----CeEEEeeeC---C-----CceeeEEEecCCCeEE---EecC----CeEEEEECCCCc
Q 014590 124 LILTGV-GDKVMRLWSLEG----YKCVEEYSL---P-----NAASLVDFDFDESKIV---GLIG----TRICIWRRNGLR 183 (422)
Q Consensus 124 ~l~s~~-~dg~v~iwd~~~----~~~~~~~~~---~-----~~~~~~~~~~~~~~l~---~~~~----~~i~~w~~~~~~ 183 (422)
+|+..+ ..+.|.|.|+.+ .+..+.++. . .....+..-|+|..++ +..+ |.+.+.|-++..
T Consensus 89 ~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~ 168 (461)
T PF05694_consen 89 YLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFE 168 (461)
T ss_dssp EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--
T ss_pred cEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcccc
Confidence 666666 678999999874 345555542 1 1112244456777766 3332 457777776544
Q ss_pred ee--eecCCCc--eeeeEEEeeeCCeEEEe--------------------cCCCeEEEEeCCCcceeeeeecCC--ccEE
Q 014590 184 SV--FPSREGT--FMKGLCMRYFDPEAVVG--------------------CEDGTARVFDMYSRKCSQIIRMHC--APVT 237 (422)
Q Consensus 184 ~~--~~~~~~~--~~~~~~~~~~~~~l~~~--------------------~~d~~i~iwd~~~~~~~~~~~~~~--~~v~ 237 (422)
.. +....+. ......+.+-.+.+++. ....++.+||+.+.+.++++.--. ....
T Consensus 169 v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pL 248 (461)
T PF05694_consen 169 VKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPL 248 (461)
T ss_dssp EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEE
T ss_pred ccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceE
Confidence 32 2221111 11112222222223333 345789999999999999886432 2345
Q ss_pred EEEec--CC-CE-EEEEcCCCcEEEEeC-CCCccc----------------------------cceEeEEEecCCCEEEE
Q 014590 238 SLSLS--ED-QL-IISGSSLGSIAISGL-SSDQRL----------------------------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 238 ~l~~~--~~-~~-l~s~~~dg~i~iwd~-~~~~~~----------------------------~~v~~~~~~~~~~~l~~ 284 (422)
.+.|. |+ .+ ++.+.-.++|..|-- ..++-. .-|+.+.+|.|.++|..
T Consensus 249 EvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYv 328 (461)
T PF05694_consen 249 EVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYV 328 (461)
T ss_dssp EEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEE
T ss_pred EEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEE
Confidence 66665 44 22 333333444444332 333211 23688999999999988
Q ss_pred Ee-CCCeEEEEECCC
Q 014590 285 GT-TAGYASCWDLRT 298 (422)
Q Consensus 285 g~-~dg~i~iwd~~~ 298 (422)
.+ ..|.|+.||+..
T Consensus 329 s~W~~GdvrqYDISD 343 (461)
T PF05694_consen 329 SNWLHGDVRQYDISD 343 (461)
T ss_dssp EETTTTEEEEEE-SS
T ss_pred EcccCCcEEEEecCC
Confidence 77 589999999985
No 425
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.47 E-value=6.6 Score=39.07 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=68.4
Q ss_pred eeeEEEeeeCCe--EEEecCCCeEEEEeCCC-------c----c---------eeeeeecCCccEEEEEec--CC-CEEE
Q 014590 194 MKGLCMRYFDPE--AVVGCEDGTARVFDMYS-------R----K---------CSQIIRMHCAPVTSLSLS--ED-QLII 248 (422)
Q Consensus 194 ~~~~~~~~~~~~--l~~~~~d~~i~iwd~~~-------~----~---------~~~~~~~~~~~v~~l~~~--~~-~~l~ 248 (422)
+..+.+..++.. |+.+..||.|.+|.+++ . + +...+. -....++++++ .. +++|
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEE
Confidence 333444444433 88999999999996521 0 0 111122 24578999998 55 7888
Q ss_pred EEcCCCcEEEEeCCCC--ccc--------cceEeEEEecCC---C---EEEEEeCCCeEEEEECC
Q 014590 249 SGSSLGSIAISGLSSD--QRL--------TGIKTLCYNPCS---R---LVFAGTTAGYASCWDLR 297 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~--~~~--------~~v~~~~~~~~~---~---~l~~g~~dg~i~iwd~~ 297 (422)
+++....|.+|-.... +.. ..|.+|+|-++. . .+++++-.|.+.+|++.
T Consensus 182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 8888888888765432 111 678899997654 2 78889999999998873
No 426
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.34 E-value=5 Score=34.89 Aligned_cols=109 Identities=10% Similarity=0.075 Sum_probs=73.9
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
+-...+.++.|+|+ +.+++......-.++=..+|+.+ .....+.+..+|+++++--.++.+.++.+.....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~ 162 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT 162 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence 44455999999987 66766666666666655667766 5566777777787777777788888887664321
Q ss_pred ee-------eec--cC-CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 302 LW-------ETR--IS-PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 302 ~~-------~~~--~~-~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+. .+. .+ +...-.++ ++|..+.|..+-+-.=+.||.+.
T Consensus 163 ~~~~~~~~i~L~~~~k~N~GfEGlA-~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 163 VISAKVQKIPLGTTNKKNKGFEGLA-WDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred EEeccceEEeccccCCCCcCceeee-cCCCCceEEEEEccCCcEEEEEe
Confidence 11 111 12 34567788 88988888887776667777655
No 427
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=93.17 E-value=6.8 Score=35.94 Aligned_cols=185 Identities=11% Similarity=-0.059 Sum_probs=95.2
Q ss_pred ecCCCeEEE----------ecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee
Q 014590 160 DFDESKIVG----------LIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 160 ~~~~~~l~~----------~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
|||+++++. +..+.+.++|++++................+++++..++... ++.|.+++..+++..+..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT 79 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT 79 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence 456666553 334678999999976442222234455778888888776664 578999998777544322
Q ss_pred -ecC----------------CccEEEEEecCC-CEEEEEc-CCCcEEEEeCCCCccc----cceEeEEEecCCCEEEEEe
Q 014590 230 -RMH----------------CAPVTSLSLSED-QLIISGS-SLGSIAISGLSSDQRL----TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 230 -~~~----------------~~~v~~l~~~~~-~~l~s~~-~dg~i~iwd~~~~~~~----~~v~~~~~~~~~~~l~~g~ 286 (422)
.+. -+.-..+-|+|| ++|+... .+..+..+.+...... ..+..+.+-.-|.--.
T Consensus 80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np--- 156 (353)
T PF00930_consen 80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNP--- 156 (353)
T ss_dssp S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS------
T ss_pred cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCC---
Confidence 110 012245778887 5555553 3444444433211110 1233444322222211
Q ss_pred CCCeEEEEECCCCeeee-ee----ccCCCceeeeeeEecCCCEEEEEe--cC---CeEEEEECCCCceEEEeee
Q 014590 287 TAGYASCWDLRTMKSLW-ET----RISPNVVYSLQHLQNDTSTLVVGG--ID---GVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~~~-~~----~~~~~~v~~l~~~s~~~~~l~s~~--~d---g~v~vwd~~~~~~~~~~~~ 350 (422)
.-.+.++|+.+++... .. ......+..+. |.++++.|+..- .+ ..+.+.|..+++....+..
T Consensus 157 -~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~-W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e 228 (353)
T PF00930_consen 157 -RVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVG-WSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEE 228 (353)
T ss_dssp -EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEE-EEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEE
T ss_pred -ceEEEEEECCCCcEEEeeeccccCCCccCcccce-ecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEe
Confidence 1136678988776531 11 22345677888 888888444332 22 2466678877766544433
No 428
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional
Probab=93.13 E-value=0.096 Score=47.39 Aligned_cols=38 Identities=24% Similarity=0.552 Sum_probs=34.2
Q ss_pred cccccCHHHHHHHHcCC-ChHhHHHHHhhchhHHHhccC
Q 014590 23 TIESLNGDIICMIFSSL-GFFDLVRCSAVCKSWNAIINR 60 (422)
Q Consensus 23 ~~~~Lp~e~~~~i~~~l-~~~~l~~~~~v~~~w~~~~~~ 60 (422)
.++.||.|++..|.+.| ...|+.+...||+.|+..+..
T Consensus 3 ~Ws~Lp~dll~~i~~~l~~~~d~~~~~~vC~sWr~a~~~ 41 (373)
T PLN03215 3 DWSTLPEELLHMIAGRLFSNVELKRFRSICRSWRSSVSG 41 (373)
T ss_pred ChhhCCHHHHHHHHhhCCcHHHHHHHHhhhhhHHHhccc
Confidence 46789999999999999 667999999999999998764
No 429
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.03 E-value=7.7 Score=36.17 Aligned_cols=44 Identities=16% Similarity=0.004 Sum_probs=36.1
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCc
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGS 354 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 354 (422)
..+.++. .+|++++.|+...=|.|.++|+.++..++.+++-.+.
T Consensus 308 R~~~~i~-~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA 351 (415)
T PF14655_consen 308 REGESIC-LSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA 351 (415)
T ss_pred ceEEEEE-ECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc
Confidence 3467777 8999998888777799999999999988888776553
No 430
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=92.80 E-value=0.5 Score=27.69 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=23.7
Q ss_pred cceEeEEEecCC---CEEEEEeCCCeEEEEECCC
Q 014590 268 TGIKTLCYNPCS---RLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 268 ~~v~~~~~~~~~---~~l~~g~~dg~i~iwd~~~ 298 (422)
+.+.++.|+|+. .+|+.+-..|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 357888898754 4777777788899999884
No 431
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.60 E-value=2.2 Score=41.75 Aligned_cols=88 Identities=14% Similarity=0.057 Sum_probs=59.4
Q ss_pred EecCCCeEEEEeCCCcceeeeee-cCCccEEEEEec--CC-CEEEEEcCCCcEEEEeCC-----CCccc-----------
Q 014590 208 VGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLS--ED-QLIISGSSLGSIAISGLS-----SDQRL----------- 267 (422)
Q Consensus 208 ~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~--~~-~~l~s~~~dg~i~iwd~~-----~~~~~----------- 267 (422)
+-+....+.|||.+.+.....-. ...+.|.++.|. |+ +.+++.+....|.++--. +....
T Consensus 46 V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~ 125 (631)
T PF12234_consen 46 VDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISS 125 (631)
T ss_pred EECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeec
Confidence 34445689999998876443322 346889999998 55 778888888888887532 11111
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
.+|....|.++|..+++++ +.+.|+|-.
T Consensus 126 ~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 126 HTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred CCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence 6778888988887665543 458888643
No 432
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.53 E-value=2.3 Score=42.67 Aligned_cols=73 Identities=21% Similarity=0.160 Sum_probs=51.9
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCC----------Cee--e-eee--------ccCCCceeeeeeEecC---CC
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT----------MKS--L-WET--------RISPNVVYSLQHLQND---TS 323 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----------~~~--~-~~~--------~~~~~~v~~l~~~s~~---~~ 323 (422)
..|..+.++|+|.+++..+..| |.|..+.. |+. . +++ ..+...|..+. |+|. +.
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~-WhP~s~~~~ 162 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVR-WHPWSESDS 162 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEE-EcCCCCCCC
Confidence 7789999999999999999877 44544431 111 1 111 12335678888 8776 47
Q ss_pred EEEEEecCCeEEEEECCCC
Q 014590 324 TLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~ 342 (422)
.|+.-..|+++++||+...
T Consensus 163 ~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred eEEEEecCCEEEEEecCCC
Confidence 8999999999999999753
No 433
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=92.30 E-value=0.78 Score=26.92 Aligned_cols=32 Identities=13% Similarity=0.253 Sum_probs=25.9
Q ss_pred CceeeeeeEecCCC---EEEEEecCCeEEEEECCCC
Q 014590 310 NVVYSLQHLQNDTS---TLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 310 ~~v~~l~~~s~~~~---~l~s~~~dg~v~vwd~~~~ 342 (422)
+.+.++. |+|++. +|+.+-.-|.|.|+|++++
T Consensus 1 GAvR~~k-FsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCK-FSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEE-eCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 4678898 997554 8888888899999999853
No 434
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=92.17 E-value=1.9 Score=36.39 Aligned_cols=64 Identities=19% Similarity=0.244 Sum_probs=40.3
Q ss_pred cCCCEEEEEeCCCeEEEEECCCCeeeeee-------c-------cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 277 PCSRLVFAGTTAGYASCWDLRTMKSLWET-------R-------ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 277 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-------~-------~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
.++.++++-+.+|.+++||+.+++.+..- . .....|..+. ++.+|.-|++-+ +|..+.|+..-+
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~-lt~~G~PiV~ls-ng~~y~y~~~L~ 97 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCS-LTSNGVPIVTLS-NGDSYSYSPDLG 97 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEE-EcCCCCEEEEEe-CCCEEEeccccc
Confidence 35666666667777777777665543221 1 2335677776 777777666654 577889987644
No 435
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=92.03 E-value=10 Score=35.22 Aligned_cols=107 Identities=16% Similarity=0.125 Sum_probs=56.3
Q ss_pred CEEEEEc-CCCcEEEEeCCCCccc------------------cceEeEEEecCCCEEEEEeC------CCeEEEEECCCC
Q 014590 245 QLIISGS-SLGSIAISGLSSDQRL------------------TGIKTLCYNPCSRLVFAGTT------AGYASCWDLRTM 299 (422)
Q Consensus 245 ~~l~s~~-~dg~i~iwd~~~~~~~------------------~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~ 299 (422)
++|+..+ ..+.|+++|+.+.... .....+-.-|+|+.++++-. -|.+.++|-++.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 4555554 7789999998743322 33444555589988887632 345888888877
Q ss_pred eeeeeeccCC---CceeeeeeEecCCCEEEEEec--------------------CCeEEEEECCCCceEEEeeecC
Q 014590 300 KSLWETRISP---NVVYSLQHLQNDTSTLVVGGI--------------------DGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 300 ~~~~~~~~~~---~~v~~l~~~s~~~~~l~s~~~--------------------dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
+......... .--+.. |+.|..+.++|... ..++.+||+.+.+.++++....
T Consensus 168 ~v~g~We~~~~~~~~gYDf-w~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~ 242 (461)
T PF05694_consen 168 EVKGRWEKDRGPQPFGYDF-WYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGE 242 (461)
T ss_dssp -EEEE--SB-TT------E-EEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-T
T ss_pred cccceeccCCCCCCCCCCe-EEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCC
Confidence 7776654422 222344 37787778877652 3579999999999998887543
No 436
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=92.02 E-value=7.3 Score=34.49 Aligned_cols=126 Identities=10% Similarity=0.102 Sum_probs=0.0
Q ss_pred eEEEEeCCCcceeeeee------cCCccEEEEEecC-------CCEEEEEcCCCcEEEEeCCCCccc-------------
Q 014590 214 TARVFDMYSRKCSQIIR------MHCAPVTSLSLSE-------DQLIISGSSLGSIAISGLSSDQRL------------- 267 (422)
Q Consensus 214 ~i~iwd~~~~~~~~~~~------~~~~~v~~l~~~~-------~~~l~s~~~dg~i~iwd~~~~~~~------------- 267 (422)
.|.+||+.+++.++++. ...+.+..+.+.. .-..++=+..+-|.++|+.+++.-
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Q ss_pred -------------cceEeEEEec---CCCEEEEEeCCCeEEEEECCCC--------------eeeeeeccCCCceeeeee
Q 014590 268 -------------TGIKTLCYNP---CSRLVFAGTTAGYASCWDLRTM--------------KSLWETRISPNVVYSLQH 317 (422)
Q Consensus 268 -------------~~v~~~~~~~---~~~~l~~g~~dg~i~iwd~~~~--------------~~~~~~~~~~~~v~~l~~ 317 (422)
..+..++.+| +++.|.-....+ -.+|.+.+. +.+..+.........++
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~- 192 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMA- 192 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEE-
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccccccccccccceeccccCCCCceEE-
Q ss_pred EecCCCEEEEEecCCeEEEEECCC
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
++++|...++--..+.|..|+..+
T Consensus 193 ~D~~G~ly~~~~~~~aI~~w~~~~ 216 (287)
T PF03022_consen 193 IDPNGNLYFTDVEQNAIGCWDPDG 216 (287)
T ss_dssp EETTTEEEEEECCCTEEEEEETTT
T ss_pred ECCCCcEEEecCCCCeEEEEeCCC
No 437
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=91.98 E-value=16 Score=37.39 Aligned_cols=165 Identities=15% Similarity=0.142 Sum_probs=101.2
Q ss_pred eEEEEeCCCcceeeeeecC-C---ccEEEEEecCC--CEEEEEcC----------CCcEEEEeCCCCccc---------c
Q 014590 214 TARVFDMYSRKCSQIIRMH-C---APVTSLSLSED--QLIISGSS----------LGSIAISGLSSDQRL---------T 268 (422)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~~-~---~~v~~l~~~~~--~~l~s~~~----------dg~i~iwd~~~~~~~---------~ 268 (422)
.++++|-++-+.+...+-. . -.+.+..|.++ .++++|+. .|.|.+|....+..+ +
T Consensus 751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G 830 (1096)
T KOG1897|consen 751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG 830 (1096)
T ss_pred EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence 3566666655544332211 1 13445557644 57777642 478888888774433 5
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce-EEE
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV-LSR 347 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~-~~~ 347 (422)
.+.++.. -+|+++|.- +..|++|+..+.+.++.-..+...+..+. ..-.|..++.|.--+.+.+-..+..+- +..
T Consensus 831 av~aL~~-fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~-l~v~gdeI~VgDlm~Sitll~y~~~eg~f~e 906 (1096)
T KOG1897|consen 831 AVYALVE-FNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALD-LQVKGDEIAVGDLMRSITLLQYKGDEGNFEE 906 (1096)
T ss_pred ceeehhh-hCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEE-EEecCcEEEEeeccceEEEEEEeccCCceEE
Confidence 5555543 256666543 45799999998877777677778888888 888899999998777776654432221 111
Q ss_pred eeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEcc
Q 014590 348 CVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 348 ~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+... -+....+++.+ ++..++-+-.+|.+.+-..+
T Consensus 907 vArD----------------------------------~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d 942 (1096)
T KOG1897|consen 907 VARD----------------------------------YNPNWMTAVEILDDDTYLGAENSGNLFTVRKD 942 (1096)
T ss_pred eehh----------------------------------hCccceeeEEEecCceEEeecccccEEEEEec
Confidence 1111 12346667776 66666666777777665554
No 438
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=90.93 E-value=8.3 Score=32.03 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=39.2
Q ss_pred CEEEEEeCCCeEEEEECC--CCeeeeeeccCCCceeeeeeEecCCCEEEEEecC---C---eEEEE
Q 014590 280 RLVFAGTTAGYASCWDLR--TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID---G---VLRVL 337 (422)
Q Consensus 280 ~~l~~g~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g---~v~vw 337 (422)
..|+.+.....|.+|++. ..+++.++..- +.|..+. ++..|.+|+|--.+ . .+|+|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~-y~~~GDYlvTlE~k~~~~~~~fvR~Y 92 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLV-YSEAGDYLVTLEEKNKRSPVDFVRAY 92 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEE-eccccceEEEEEeecCCccceEEEEE
Confidence 345444667789999988 34555666543 7889999 88999999986432 2 56665
No 439
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=90.90 E-value=11 Score=33.50 Aligned_cols=135 Identities=19% Similarity=0.161 Sum_probs=69.3
Q ss_pred EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC-CCcc---------c-
Q 014590 199 MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS-SDQR---------L- 267 (422)
Q Consensus 199 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~-~~~~---------~- 267 (422)
...++.++++++......-||.-...-...-+.-...|..+.|.|+..+......|.|++=+.. ..+. .
T Consensus 152 r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~ 231 (302)
T PF14870_consen 152 RSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTN 231 (302)
T ss_dssp E-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS-
T ss_pred ECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccC
Confidence 3445555667666666667775322122222334678999999998666556688888887621 1111 0
Q ss_pred -cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec---cCCCceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 268 -TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR---ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 268 -~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
..+..+++.+++...++|+ +|.+ +.....|+.-.+.+ .-....+.+.|+++ .+-++ -+.+|.|.-|
T Consensus 232 ~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~-~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 232 GYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNP-DKGFV-LGQDGVLLRY 301 (302)
T ss_dssp -S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEET-TEEEE-E-STTEEEEE
T ss_pred ceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCC-CceEE-ECCCcEEEEe
Confidence 5589999998877777666 4533 44555555443332 22356788884444 44344 4568876544
No 440
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.78 E-value=4.9 Score=42.19 Aligned_cols=130 Identities=18% Similarity=0.203 Sum_probs=82.4
Q ss_pred cCCCeEEEEeCCCcceeeeeecCCccEEEEEec-C-------C-CEEEEEcCCCcEEEEeCCCCc----cc---------
Q 014590 210 CEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-E-------D-QLIISGSSLGSIAISGLSSDQ----RL--------- 267 (422)
Q Consensus 210 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~-------~-~~l~s~~~dg~i~iwd~~~~~----~~--------- 267 (422)
+-|+.+.+|+.+++.....+.+-...|..+..- | . ++++.-+.--.|.++-+.-.+ ..
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 458899999999977777777666667666543 2 2 333333344455554332211 11
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEE--EECCCC---e-----------------eeeeec-cCCCceeeeeeEecC
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASC--WDLRTM---K-----------------SLWETR-ISPNVVYSLQHLQND 321 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~i--wd~~~~---~-----------------~~~~~~-~~~~~v~~l~~~s~~ 321 (422)
..|.++....+|+.+++|-. |.|+= |....+ + .+-.+. .+..+|..+. .+..
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G~d-g~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~-ID~S 253 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAGRD-GNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQIT-IDNS 253 (1311)
T ss_pred cCCceEEEEEeccCCcEEEeecC-CCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeE-eccc
Confidence 56788887788887776654 43432 222211 0 011223 4567899998 8877
Q ss_pred CCEEEEEecCCeEEEEECCC
Q 014590 322 TSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~ 341 (422)
.+.+.+-++.|+|.+||+..
T Consensus 254 R~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 254 RNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred cceeeeeccCceEEEEEccC
Confidence 78999999999999999975
No 441
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=90.77 E-value=14 Score=34.30 Aligned_cols=40 Identities=5% Similarity=0.066 Sum_probs=20.0
Q ss_pred CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcC
Q 014590 213 GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSS 252 (422)
Q Consensus 213 ~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~ 252 (422)
..+.+||..+.+-.. .+......-.++....+.+.+.|+.
T Consensus 189 ~~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~~~~~iYv~GG~ 230 (376)
T PRK14131 189 KEVLSYDPSTNQWKNAGESPFLGTAGSAVVIKGNKLWLINGE 230 (376)
T ss_pred ceEEEEECCCCeeeECCcCCCCCCCcceEEEECCEEEEEeee
Confidence 358889987765322 1211111122344445666666664
No 442
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=90.20 E-value=12 Score=32.68 Aligned_cols=151 Identities=10% Similarity=-0.012 Sum_probs=87.2
Q ss_pred cceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEE-EecCCeEEEEECCCCce-eeecC
Q 014590 113 VGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRS-VFPSR 189 (422)
Q Consensus 113 ~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~-~~~~~ 189 (422)
+.+..+.++.++...+..+.-++|.|+.+......... +.......+.-.|++.. +..+..+.+.|+.++.. .+...
T Consensus 87 ~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lagr 166 (370)
T COG5276 87 DLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGR 166 (370)
T ss_pred hhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeeee
Confidence 34555666677788888888899999987543222221 12234456666788877 66688888999887652 22221
Q ss_pred C-CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce---eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCc
Q 014590 190 E-GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC---SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQ 265 (422)
Q Consensus 190 ~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~ 265 (422)
- ........+.-.+++-..+..|+-+.+-|+..... +.... ....+.++..+++...++-... -+.+-|..+.+
T Consensus 167 ya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-~g~g~~sv~vsdnr~y~vvy~e-gvlivd~s~~s 244 (370)
T COG5276 167 YALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-TGPGTYSVSVSDNRAYLVVYDE-GVLIVDVSGPS 244 (370)
T ss_pred eccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-cCCceEEEEecCCeeEEEEccc-ceEEEecCCCC
Confidence 1 11111123344566677777889999999865532 22221 1226777877777433333333 34455554444
No 443
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.19 E-value=1.6 Score=42.76 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=29.2
Q ss_pred ceeeeeeEec----CCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 311 VVYSLQHLQN----DTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 311 ~v~~l~~~s~----~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.+.+++ +++ +..+|++-+.|+.+|+||+.+++++.+...
T Consensus 216 ~~~~~~-~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 216 VAASLA-VSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp -EEEEE-E-----ETTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred ccceEE-EecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence 344444 444 677999999999999999999999776644
No 444
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=90.15 E-value=0.3 Score=48.43 Aligned_cols=126 Identities=10% Similarity=0.078 Sum_probs=72.4
Q ss_pred CCeEEEEeCCCcc-eeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCC--CCccc------------cceEeEE
Q 014590 212 DGTARVFDMYSRK-CSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLS--SDQRL------------TGIKTLC 274 (422)
Q Consensus 212 d~~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~--~~~~~------------~~v~~~~ 274 (422)
.+.+++-+..+.- ....+++..+.|-.+.|... ..+. -.-|.+.+||+. .|+.. ..+.-+.
T Consensus 110 ~~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~ 187 (1283)
T KOG1916|consen 110 ENGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVS 187 (1283)
T ss_pred hhhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceee
Confidence 3455555543321 11223455666666766421 1111 233566777764 33322 3334444
Q ss_pred Ee---cCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee----------eEecCCCEEEEEecCCeEEEEECC
Q 014590 275 YN---PCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ----------HLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 275 ~~---~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~----------~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
|. ++..++..+-.++.|++.+..+... .-+++|...+..++ -.||||..++.++.||.+++|.+.
T Consensus 188 wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 188 WCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred ecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 43 3556777777888888877664322 33455766665554 257999999999999998888653
No 445
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=90.13 E-value=15 Score=33.60 Aligned_cols=40 Identities=5% Similarity=0.053 Sum_probs=20.0
Q ss_pred CeEEEEeCCCccee--eeeecCCccEEEEEecCCCEEEEEcC
Q 014590 213 GTARVFDMYSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSS 252 (422)
Q Consensus 213 ~~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~ 252 (422)
..+.+||+.+.+-. ..+......-.+++...+.+++.|+.
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~ 209 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGE 209 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeee
Confidence 46888998776422 22221011112333435567777764
No 446
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.03 E-value=2.5 Score=43.51 Aligned_cols=114 Identities=11% Similarity=0.008 Sum_probs=71.3
Q ss_pred cEEEEEecCC---CEEEEEcCCCcEEEEeCCCCccc------------------cceEeEEEecCCC-EEEEEeCCCeEE
Q 014590 235 PVTSLSLSED---QLIISGSSLGSIAISGLSSDQRL------------------TGIKTLCYNPCSR-LVFAGTTAGYAS 292 (422)
Q Consensus 235 ~v~~l~~~~~---~~l~s~~~dg~i~iwd~~~~~~~------------------~~v~~~~~~~~~~-~l~~g~~dg~i~ 292 (422)
++..+...+| ..++..+.+-.|..||+++-... ....++.|+|.-. ..++...|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 3444444444 34444455557888998754322 4556677777542 345566788888
Q ss_pred EEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 293 CWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 293 iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+..+.......+--.-....++++ |+|.|+.++.|-..|++.-|... ++....+..
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~-WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~ 237 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVL-WSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPE 237 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEE-eccccceeeEecCCCeEEEeecc-cceeecccC
Confidence 876653322211112345678998 99999999999999999888754 555455443
No 447
>KOG2063 consensus Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.99 E-value=17 Score=37.34 Aligned_cols=68 Identities=12% Similarity=0.058 Sum_probs=42.6
Q ss_pred EEEecCCeEEEEecCCeEEEEEcCCCeEE---Ee------ee---CCCceeeEEEecCCCeEEEecCCeEEEEECCCCce
Q 014590 117 QCRMKRGLILTGVGDKVMRLWSLEGYKCV---EE------YS---LPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS 184 (422)
Q Consensus 117 ~v~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~------~~---~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~ 184 (422)
|++-.++.+..|+.||.+.+|.+...... .. +. ....+..+...+.-..++...|+.+.++++.+.+.
T Consensus 21 ~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~dsqi~~~~l~~~~~ 100 (877)
T KOG2063|consen 21 CVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILSDSQIAVHKLPELEP 100 (877)
T ss_pred HHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheecCCcceeeecCcccc
Confidence 55556779999999999999998653211 11 00 01222334444555556677888888888776554
No 448
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=89.71 E-value=14 Score=32.61 Aligned_cols=146 Identities=16% Similarity=0.137 Sum_probs=86.0
Q ss_pred EEEecCCCeEEEEeCCCcce-----eeeee-cCCccE-EEEEec--CC-CEEEEE-cCCCcEEEEeCCCCccc-------
Q 014590 206 AVVGCEDGTARVFDMYSRKC-----SQIIR-MHCAPV-TSLSLS--ED-QLIISG-SSLGSIAISGLSSDQRL------- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~-----~~~~~-~~~~~v-~~l~~~--~~-~~l~s~-~~dg~i~iwd~~~~~~~------- 267 (422)
++.+++||+|.-|...-+.. ...+. ...+.| ..+++. .. ++|..+ -..++|.+||-.-....
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D 182 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID 182 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence 68889999999998633221 11221 112333 345554 22 444444 56789999986433211
Q ss_pred ---------cceE---------eEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--CCCceeeeeeEe------cC
Q 014590 268 ---------TGIK---------TLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI--SPNVVYSLQHLQ------ND 321 (422)
Q Consensus 268 ---------~~v~---------~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~s------~~ 321 (422)
..|. -..-.+++..=+.|..-|.|-+||+. ++.++++.. .-..-+.|+ .. ..
T Consensus 183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a-~APa~FG~~s 260 (336)
T TIGR03118 183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLA-IAPESFGSLS 260 (336)
T ss_pred CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceee-eChhhhCCCC
Confidence 1111 11112222222333445789999987 778877732 224556666 42 35
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
+.+|+---.||+|..||..+|+.+..+....+
T Consensus 261 g~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G 292 (336)
T TIGR03118 261 GALLVGNFGDGTINAYDPQSGAQLGQLLDPDN 292 (336)
T ss_pred CCeEEeecCCceeEEecCCCCceeeeecCCCC
Confidence 66777777899999999999998888866433
No 449
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=89.59 E-value=15 Score=32.81 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=52.3
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCcee-----eeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVY-----SLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~-----~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
..+++|...++|.+|++.-.-..|.+.|.++|+.++.+.+..+.=. ..+ +-.+-+++-.+..++.|.++|=
T Consensus 144 ~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~-~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 144 FHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFS-WQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred cEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEe-eccCCEEeccCCCCCEEEEEcC
Confidence 5678888888999999999999999999999999999876622111 122 3334445555567888999986
No 450
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=89.49 E-value=14 Score=32.34 Aligned_cols=176 Identities=11% Similarity=-0.023 Sum_probs=103.1
Q ss_pred CCCeEE-EecCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc---eeeeeecCCccE
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK---CSQIIRMHCAPV 236 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v 236 (422)
.+++.. +..+..+++.|+.++... ....-.......++.-.++...++..|.-+-+.|+.+.+ ....+......-
T Consensus 95 se~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~ 174 (370)
T COG5276 95 SEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDT 174 (370)
T ss_pred cccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCc
Confidence 445554 778889999999887632 222211112345666677777777756666677876543 333444444444
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 237 TSLSLSEDQLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 237 ~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
..++++ +++...+..|+-+.+-|+.+.... ..+.++..+++..+++... .| +.+-|..+.+..+.+..
T Consensus 175 ~~v~IS-Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~-eg-vlivd~s~~ssp~~~gs 251 (370)
T COG5276 175 HDVAIS-GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD-EG-VLIVDVSGPSSPTVFGS 251 (370)
T ss_pred eeEEEe-cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc-cc-eEEEecCCCCCceEeec
Confidence 566664 556667778999999999876554 3677777777666655544 33 67777776554433322
Q ss_pred C-CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 308 S-PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 308 ~-~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
. +..+.++.-+.-.+++......+.-+-+-|+.
T Consensus 252 yet~~p~~~s~v~Vs~~~~Yvadga~gl~~idis 285 (370)
T COG5276 252 YETSNPVSISTVPVSGEYAYVADGAKGLPIIDIS 285 (370)
T ss_pred cccCCcccccceecccceeeeeccccCceeEecc
Confidence 1 12222221133445555555555556566654
No 451
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=89.45 E-value=2.9 Score=38.48 Aligned_cols=148 Identities=13% Similarity=0.068 Sum_probs=90.7
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCc----eeeecCCCce---ee-eEEEeeeCCeEEEecCCCeEEEE-eCCCc-c--
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLR----SVFPSREGTF---MK-GLCMRYFDPEAVVGCEDGTARVF-DMYSR-K-- 224 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~----~~~~~~~~~~---~~-~~~~~~~~~~l~~~~~d~~i~iw-d~~~~-~-- 224 (422)
+-+.|||+.+..-...++.++++.+.. ++.....+.. +. ...+...+..+++++.||.|.-| |.+.+ +
T Consensus 226 llL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~ 305 (733)
T COG4590 226 LLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPH 305 (733)
T ss_pred hEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCCCCc
Confidence 567889999986666888898887643 2222222211 11 11112223338889999999887 44332 2
Q ss_pred --eeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEE
Q 014590 225 --CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWD 295 (422)
Q Consensus 225 --~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd 295 (422)
.++.++-...++..+.-..+ +-+++-+..|++..+.....+.+ ..+..+++||.+.++++-. .|.++++.
T Consensus 306 l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~ 384 (733)
T COG4590 306 LNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQ 384 (733)
T ss_pred ceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchheeec-CCceEEEE
Confidence 12222222334433332222 56888889999988876555544 7778899999999988765 45699998
Q ss_pred CCCCeeeeee
Q 014590 296 LRTMKSLWET 305 (422)
Q Consensus 296 ~~~~~~~~~~ 305 (422)
+++..+.-++
T Consensus 385 l~Nr~Peisw 394 (733)
T COG4590 385 LENRNPEISW 394 (733)
T ss_pred ecCCCCCccH
Confidence 8875544333
No 452
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=89.37 E-value=15 Score=32.68 Aligned_cols=113 Identities=14% Similarity=0.198 Sum_probs=55.8
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEEC-CCCee
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDL-RTMKS 301 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~-~~~~~ 301 (422)
.-.+.+..+..+++ .++++++......-||--...-. ..|.+|.|+|++.+.+++ ..|.|+.=+. ...+.
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~ 220 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET 220 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc
Confidence 34467788877777 55656555444556764321111 789999999998876655 7888887762 22222
Q ss_pred eee----eccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE
Q 014590 302 LWE----TRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 302 ~~~----~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
... .....-.+..++ +.+++...++|+ .|.+ +.....|+.=+.
T Consensus 221 w~~~~~~~~~~~~~~ld~a-~~~~~~~wa~gg-~G~l-~~S~DgGktW~~ 267 (302)
T PF14870_consen 221 WSEPIIPIKTNGYGILDLA-YRPPNEIWAVGG-SGTL-LVSTDGGKTWQK 267 (302)
T ss_dssp E---B-TTSS--S-EEEEE-ESSSS-EEEEES-TT-E-EEESSTTSS-EE
T ss_pred cccccCCcccCceeeEEEE-ecCCCCEEEEeC-CccE-EEeCCCCccceE
Confidence 111 111223478888 877777666554 5533 334445554333
No 453
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.07 E-value=4.8 Score=37.91 Aligned_cols=78 Identities=15% Similarity=0.051 Sum_probs=50.4
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEEC---------CCCeeeeeec-----------cCCCceeeeeeEecCC---CE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDL---------RTMKSLWETR-----------ISPNVVYSLQHLQNDT---ST 324 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~---------~~~~~~~~~~-----------~~~~~v~~l~~~s~~~---~~ 324 (422)
..|..+..++.|..++-.+.+|.+.++=. +.|+++...+ ...-.+..++ |+|+. ..
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~-WHP~S~~D~h 182 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAA-WHPSSILDPH 182 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeecc-ccCCccCCce
Confidence 66778888999999999999995544321 1232221110 0112344555 77875 57
Q ss_pred EEEEecCCeEEEEECCCCceEE
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~ 346 (422)
|..-+.|..+++||+.....+.
T Consensus 183 L~iL~sdnviRiy~lS~~tely 204 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYSLSEPTELY 204 (741)
T ss_pred EEEEecCcEEEEEecCCcchhh
Confidence 8888889999999987655443
No 454
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=88.73 E-value=15 Score=37.20 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=53.0
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCC-CceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCC
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-GEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIR 388 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~ 388 (422)
-.|..+. ++|+|.+|+..|..| |.|-.+.. .-.-..+......+.+-+ .+-+. .-+...+.
T Consensus 85 f~v~~i~-~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt--------------~~v~~--~~~~~~~~ 146 (717)
T PF10168_consen 85 FEVHQIS-LNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRT--------------VPVDE--RFFTSNSS 146 (717)
T ss_pred eeEEEEE-ECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEE--------------EEech--hhccCCCC
Confidence 4688888 999999999988877 55555531 111111111111000000 00000 00112345
Q ss_pred CCeEEEEe-----cCEEEEEEeCCCeEEEEEccCCC
Q 014590 389 PPITCLAV-----GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 389 ~~v~~i~~-----~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..|..+.| ++.+|+.=..|+++|+||+..+.
T Consensus 147 ~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 147 LEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred ceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 67889999 36889999999999999997543
No 455
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=88.29 E-value=21 Score=32.87 Aligned_cols=130 Identities=15% Similarity=0.223 Sum_probs=79.9
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec-----CCC---EEEEEcCC---CcEEEEeCC--CCccc-----
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-----EDQ---LIISGSSL---GSIAISGLS--SDQRL----- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-----~~~---~l~s~~~d---g~i~iwd~~--~~~~~----- 267 (422)
++....++-+.+||+ .|+.++.+. .+.++.+..- .++ ++++...+ .+|++|.+. ++...
T Consensus 71 IigTdK~~GL~VYdL-~Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~ 147 (381)
T PF02333_consen 71 IIGTDKKGGLYVYDL-DGKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDP 147 (381)
T ss_dssp EEEEETTTEEEEEET-TS-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBT
T ss_pred EEEEeCCCCEEEEcC-CCcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCC
Confidence 777778889999999 477777664 3455555442 231 23333332 468898764 23221
Q ss_pred --------cceEeEEEe--c-CCC-EEEEEeCCCeEEEEECC---CC----eeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 268 --------TGIKTLCYN--P-CSR-LVFAGTTAGYASCWDLR---TM----KSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 --------~~v~~~~~~--~-~~~-~l~~g~~dg~i~iwd~~---~~----~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
..++.+|+- | +|. ++++...+|.+.-|.+. .+ ++++++... ..+..+. .+....+|+.+
T Consensus 148 ~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~-sQ~EGCV-VDDe~g~LYvg 225 (381)
T PF02333_consen 148 AAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVG-SQPEGCV-VDDETGRLYVG 225 (381)
T ss_dssp TC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-S-S-EEEEE-EETTTTEEEEE
T ss_pred CcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCC-CcceEEE-EecccCCEEEe
Confidence 346677763 3 344 66677889988887664 23 467777654 4677777 77777899999
Q ss_pred ecCCeEEEEECC
Q 014590 329 GIDGVLRVLDQN 340 (422)
Q Consensus 329 ~~dg~v~vwd~~ 340 (422)
-++.-|.-|+.+
T Consensus 226 EE~~GIW~y~Ae 237 (381)
T PF02333_consen 226 EEDVGIWRYDAE 237 (381)
T ss_dssp ETTTEEEEEESS
T ss_pred cCccEEEEEecC
Confidence 988777777765
No 456
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=88.21 E-value=16 Score=31.61 Aligned_cols=167 Identities=14% Similarity=0.001 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCcceeeeeecCCc-cEEEEEecCC-CEEEEEc---CCCcEEEEeCCCCccc----cceEeEEEecCCCEE
Q 014590 212 DGTARVFDMYSRKCSQIIRMHCA-PVTSLSLSED-QLIISGS---SLGSIAISGLSSDQRL----TGIKTLCYNPCSRLV 282 (422)
Q Consensus 212 d~~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~-~~l~s~~---~dg~i~iwd~~~~~~~----~~v~~~~~~~~~~~l 282 (422)
||.+.-.+-...+++....+... .+.+.+++++ +.++... ....+.++........ ..+..-.|++++...
T Consensus 1 dG~l~~~~~~~~~pv~g~~~~~~~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W 80 (253)
T PF10647_consen 1 DGQLVRVSGGGVTPVPGALGEGGYDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVW 80 (253)
T ss_pred CCcEEEecCCceeECCCCcCcCCccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEE
Q ss_pred EEEeCCCeEEEEEC---CCCeeeeeeccCCC-ceeeeeeEecCCCEEEEEe---cCCeEEEEECCCCceE--EEeeecCC
Q 014590 283 FAGTTAGYASCWDL---RTMKSLWETRISPN-VVYSLQHLQNDTSTLVVGG---IDGVLRVLDQNTGEVL--SRCVMDIG 353 (422)
Q Consensus 283 ~~g~~dg~i~iwd~---~~~~~~~~~~~~~~-~v~~l~~~s~~~~~l~s~~---~dg~v~vwd~~~~~~~--~~~~~~~~ 353 (422)
++...+....++.. .+...+..-..... .|.++. +||||..++.-. .++.|.+=-+.....- ..+..
T Consensus 81 ~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~-vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~--- 156 (253)
T PF10647_consen 81 TVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALR-VSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTG--- 156 (253)
T ss_pred EEEcCCCceEEEEecCCCcceeEEecccccCCceEEEE-ECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceecc---
Q ss_pred cccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 354 SASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 354 ~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
...+.......+++++| ++.+++.+...+
T Consensus 157 --------------------------~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 157 --------------------------PRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred --------------------------ceEecccccCcceeeeecCCCEEEEEeCCCC
No 457
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=88.11 E-value=1.9 Score=23.37 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=22.6
Q ss_pred cCCeEEEEecCCeEEEEEcCCCeEEEee
Q 014590 121 KRGLILTGVGDKVMRLWSLEGYKCVEEY 148 (422)
Q Consensus 121 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 148 (422)
.++.++.++.+|.+...|.++|+.+..+
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 4567888888999999999888877654
No 458
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=87.19 E-value=3.8 Score=23.57 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=25.6
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDF 159 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 159 (422)
.+++.-.+++|.++|..+++.+..+........+.|
T Consensus 6 lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 6 LYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 444455688999999999999888877544444443
No 459
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.15 E-value=18 Score=38.24 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=26.7
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCc
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
+.....++|+|....++ ++..|.|+++....-+
T Consensus 35 ~~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve 68 (993)
T KOG1983|consen 35 PSTPSALAFDPTQGLLAIGTRTGAIKIYGQPGVE 68 (993)
T ss_pred CCCCcceeeccccceEEEEEecccEEEecccceE
Confidence 34556799999999998 9999999999766544
No 460
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=86.89 E-value=3.9 Score=23.53 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=23.6
Q ss_pred cCCCEEEEEe-CCCeEEEEECCCCeeeeeecc
Q 014590 277 PCSRLVFAGT-TAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 277 ~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~ 307 (422)
|++++++++. .++.|.++|..+++.+.++..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 5677776655 578899999988887777665
No 461
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=86.82 E-value=31 Score=33.36 Aligned_cols=106 Identities=13% Similarity=0.136 Sum_probs=57.9
Q ss_pred ccEEEEEecCCC-EEEEEc--CCCcEEEEeCCCCccccceEeEEEecCC----CEEEEEeCCCeEEEEECCC-----Cee
Q 014590 234 APVTSLSLSEDQ-LIISGS--SLGSIAISGLSSDQRLTGIKTLCYNPCS----RLVFAGTTAGYASCWDLRT-----MKS 301 (422)
Q Consensus 234 ~~v~~l~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~v~~~~~~~~~----~~l~~g~~dg~i~iwd~~~-----~~~ 301 (422)
.++..++|.+++ .+++.- .+|.+++=|-..-.....|..++|.|-+ ..+++......|.+|.+.. ++.
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~ 99 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDSKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKL 99 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCCccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccc
Confidence 478889998774 444432 3444444332211111789999999853 3455555677899998752 222
Q ss_pred eeeeccCC---Cc--eeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 302 LWETRISP---NV--VYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 302 ~~~~~~~~---~~--v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+..-..+- -+ -.... |+|....|+.-.....-.++++.
T Consensus 100 l~sQtcEi~e~~pvLpQGCV-WHPk~~iL~VLT~~dvSV~~sV~ 142 (671)
T PF15390_consen 100 LMSQTCEIREPFPVLPQGCV-WHPKKAILTVLTARDVSVLPSVH 142 (671)
T ss_pred eeeeeeeccCCcccCCCccc-ccCCCceEEEEecCceeEeeeee
Confidence 22211111 11 11233 88888877776655544455554
No 462
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=86.67 E-value=26 Score=32.33 Aligned_cols=58 Identities=16% Similarity=0.027 Sum_probs=31.6
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEE-ECCC-------Ceee-eeecc----CCCceeeeeeEecCCCEEEEEe
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCW-DLRT-------MKSL-WETRI----SPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iw-d~~~-------~~~~-~~~~~----~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
.....+++.++| |+++.... |..+ |... .+.+ ..+.. +......+. +.|||.+.++-+
T Consensus 72 ~~p~Gi~~~~~G--lyV~~~~~-i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~-~gpDG~LYv~~G 142 (367)
T TIGR02604 72 SMVTGLAVAVGG--VYVATPPD-ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLA-WGPDGWLYFNHG 142 (367)
T ss_pred CCccceeEecCC--EEEeCCCe-EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCce-ECCCCCEEEecc
Confidence 456788888888 44444443 4444 4431 1112 12222 124467788 889998665544
No 463
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=86.20 E-value=18 Score=30.07 Aligned_cols=102 Identities=8% Similarity=0.093 Sum_probs=59.2
Q ss_pred EEEecCCCEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCC---C---eEEEE---ECC--C
Q 014590 238 SLSLSEDQLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTA---G---YASCW---DLR--T 298 (422)
Q Consensus 238 ~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~d---g---~i~iw---d~~--~ 298 (422)
.++..+.+.+..+.....|.+|++.+.... +.|..+.++..|+++++-=.+ . .+++| ... .
T Consensus 22 ~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~ 101 (215)
T PF14761_consen 22 AVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEE 101 (215)
T ss_pred eeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhccc
Confidence 344433234444466778999999833322 899999999999999986432 2 45664 222 1
Q ss_pred Ceeee-eeccC---------------------CCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 299 MKSLW-ETRIS---------------------PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 299 ~~~~~-~~~~~---------------------~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
..++. .+-|| ...+.++++..-.|+.+ .|+ ++.+.+|.+..
T Consensus 102 ~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~Ll-Vg~-~~~l~lf~l~~ 164 (215)
T PF14761_consen 102 NSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLL-VGC-GNKLVLFTLKY 164 (215)
T ss_pred CCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEE-EEc-CCEEEEEEEEE
Confidence 12221 11121 23456777555566644 444 45688998753
No 464
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=85.69 E-value=18 Score=34.93 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=64.9
Q ss_pred cEEEEEecC----C-CEEEEEcCCCcEEEEeCCC-----Cccc------------cceEeEEEecCCCEEEEEeCCCeEE
Q 014590 235 PVTSLSLSE----D-QLIISGSSLGSIAISGLSS-----DQRL------------TGIKTLCYNPCSRLVFAGTTAGYAS 292 (422)
Q Consensus 235 ~v~~l~~~~----~-~~l~s~~~dg~i~iwd~~~-----~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~ 292 (422)
-|..+.|.| + ..+++.-....|.+|.+.- ++.+ .-...+.|+|....|++-.....=.
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV 137 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV 137 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence 477888886 2 2455556677889998752 2221 2234567899888888776655444
Q ss_pred EEECCCC--eeeeeeccCCCceeeeeeEecCCCEEEEEec-CCeEEEEECC
Q 014590 293 CWDLRTM--KSLWETRISPNVVYSLQHLQNDTSTLVVGGI-DGVLRVLDQN 340 (422)
Q Consensus 293 iwd~~~~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~ 340 (422)
+++.+.. +....++ ..+.|.|.+ |..||++|+.+-. .=.-++||-.
T Consensus 138 ~~sV~~d~srVkaDi~-~~G~IhCAC-WT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 138 LPSVHCDSSRVKADIK-TSGLIHCAC-WTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred eeeeeeCCceEEEecc-CCceEEEEE-ecCcCCEEEEEeCCeEEEEEecCc
Confidence 5565532 2333343 347788887 9999997766543 3356788754
No 465
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=85.42 E-value=0.17 Score=46.58 Aligned_cols=133 Identities=12% Similarity=0.168 Sum_probs=91.0
Q ss_pred eeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------cce
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL-------TGI 270 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------~~v 270 (422)
...+..++.++.+..+..||- .++...... .++....++|+.+ ..++.+-..+.+.+||+.+.... ..-
T Consensus 43 ~~e~~nlavaca~tiv~~YD~-agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~ 120 (615)
T KOG2247|consen 43 RPEGHNLAVACANTIVIYYDK-AGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSK 120 (615)
T ss_pred ecCCCceehhhhhhHHHhhhh-hcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchH
Confidence 334445888888888888985 344433332 2344456677632 56667778899999999765433 222
Q ss_pred EeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 271 KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 271 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
.-+.|++.+..++.|...|.+.+++..+.+.+.....|...+++++ +.+.+. .+.++.|..+.+
T Consensus 121 sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~a-v~lEd~-vil~dcd~~L~v 184 (615)
T KOG2247|consen 121 SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIA-VTLEDY-VILCDCDNTLSV 184 (615)
T ss_pred HHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEE-ecccce-eeecCcHHHHHH
Confidence 2267888888999999999999999888776666655888899998 877664 455555554433
No 466
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=83.72 E-value=3.1 Score=22.44 Aligned_cols=25 Identities=32% Similarity=0.531 Sum_probs=18.2
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeee
Q 014590 281 LVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 281 ~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
.+++++.+|.+..+|..+|+.++++
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5667777888888888777776553
No 467
>PLN02193 nitrile-specifier protein
Probab=83.16 E-value=45 Score=32.05 Aligned_cols=126 Identities=12% Similarity=0.113 Sum_probs=62.5
Q ss_pred eEEEEECCCCceeeecCCC---c-eeeeEEEeeeCCe-EEEecCC-----CeEEEEeCCCcceeeeeec----CCccEEE
Q 014590 173 RICIWRRNGLRSVFPSREG---T-FMKGLCMRYFDPE-AVVGCED-----GTARVFDMYSRKCSQIIRM----HCAPVTS 238 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~-l~~~~~d-----~~i~iwd~~~~~~~~~~~~----~~~~v~~ 238 (422)
.+.+||+.+..-......+ . .....++...++. .+.|+.+ ..+..+|+.+.+-...-.. ....-.+
T Consensus 194 ~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~ 273 (470)
T PLN02193 194 HLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHS 273 (470)
T ss_pred cEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceE
Confidence 4777888776533211111 0 0112223333333 5555544 4688889877643221110 1111123
Q ss_pred EEecCCCEEEEEcCCC-----cEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCC----CeEEEEECC
Q 014590 239 LSLSEDQLIISGSSLG-----SIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTA----GYASCWDLR 297 (422)
Q Consensus 239 l~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~ 297 (422)
++...+.+++.|+.++ .+..||+.+.+-. ... .++ .-+++.++.|+.+ ..+.+||+.
T Consensus 274 ~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~-~~~gkiyviGG~~g~~~~dv~~yD~~ 351 (470)
T PLN02193 274 MAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLE-VVQGKVWVVYGFNGCEVDDVHYYDPV 351 (470)
T ss_pred EEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEE-EECCcEEEEECCCCCccCceEEEECC
Confidence 3333557777777543 4667777665422 111 111 2256777777654 458899988
Q ss_pred CCe
Q 014590 298 TMK 300 (422)
Q Consensus 298 ~~~ 300 (422)
+.+
T Consensus 352 t~~ 354 (470)
T PLN02193 352 QDK 354 (470)
T ss_pred CCE
Confidence 754
No 468
>PRK10115 protease 2; Provisional
Probab=82.91 E-value=58 Score=33.11 Aligned_cols=184 Identities=10% Similarity=0.034 Sum_probs=0.0
Q ss_pred EEEEEecCC-CEEEEEcCCC-----cEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeCCC------eEEEEECCC
Q 014590 236 VTSLSLSED-QLIISGSSLG-----SIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTTAG------YASCWDLRT 298 (422)
Q Consensus 236 v~~l~~~~~-~~l~s~~~dg-----~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg------~i~iwd~~~ 298 (422)
+..+.++|+ ++++.+...+ .|++.|+.+|..+ ..-..++|.+|++.|+....+. .|+.+++.+
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt 208 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGT 208 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCC
Q ss_pred C--eeeeeeccCCCceeeeeeEecCCCEEEEEecCC---eEEEEE--CCCCceEEEeeecCCcccccCCCCCCeEEeeec
Q 014590 299 M--KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG---VLRVLD--QNTGEVLSRCVMDIGSASSSSNKVSGVIERNEG 371 (422)
Q Consensus 299 ~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg---~v~vwd--~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~ 371 (422)
+ +....+........-..+.+.++++++..+.++ .+.+++ ..+++....+....+....+. ...+.+++.+.
T Consensus 209 ~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~tn 287 (686)
T PRK10115 209 PASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFYLRSN 287 (686)
T ss_pred ChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEEEEEc
Q ss_pred c----------ccCCCcccccCCCCCCC-CeEEEEe-cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 372 R----------RLSAGCCIDRIPKTIRP-PITCLAV-GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 372 ~----------~~~~~~~~~~~~~~h~~-~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
. .+........+...... .|..+.+ .+.++++...+|.-+++-++...+
T Consensus 288 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~ 348 (686)
T PRK10115 288 RHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTR 348 (686)
T ss_pred CCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCC
No 469
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=82.76 E-value=19 Score=27.44 Aligned_cols=100 Identities=16% Similarity=0.277 Sum_probs=63.5
Q ss_pred CCeEEEecCCCeEEEEeCCCcc--------eeeeeecCCccEEEEEecC---C---CEEEEEcCCCcEEEEeCCCCccc-
Q 014590 203 DPEAVVGCEDGTARVFDMYSRK--------CSQIIRMHCAPVTSLSLSE---D---QLIISGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~v~~l~~~~---~---~~l~s~~~dg~i~iwd~~~~~~~- 267 (422)
.|.|+.++..|.|.|.+..... .+..+. -...|++++-.+ + ..|+.|+. ..+..||+.....+
T Consensus 10 ~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d~F 87 (136)
T PF14781_consen 10 HPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSDLF 87 (136)
T ss_pred ceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccCchhh
Confidence 4458888889999999876432 333333 345677775442 2 56777654 57889999887766
Q ss_pred -----cceEeEEEec----CCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 268 -----TGIKTLCYNP----CSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 268 -----~~v~~~~~~~----~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
..+.++.+-. +..++++|+ +..|.-||..-.+..++.
T Consensus 88 yke~~DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 88 YKEVPDGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred hhhCccceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCCcEEEEEe
Confidence 7777777642 234455554 456777776655555544
No 470
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=82.72 E-value=40 Score=31.10 Aligned_cols=186 Identities=11% Similarity=0.043 Sum_probs=103.7
Q ss_pred CCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEE----EeeeCCe--EEEecC-C---CeEEEEeCC--Ccceeee
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLC----MRYFDPE--AVVGCE-D---GTARVFDMY--SRKCSQI 228 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--l~~~~~-d---~~i~iwd~~--~~~~~~~ 228 (422)
....++ ...++.+.+||+++....... .+... -+. +...+.. |+.++. + .+|++|.+. ++. +..
T Consensus 67 ~kSlIigTdK~~GL~VYdL~Gk~lq~~~-~Gr~N-NVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~~ 143 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLDGKELQSLP-VGRPN-NVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LTD 143 (381)
T ss_dssp GG-EEEEEETTTEEEEEETTS-EEEEE--SS-EE-EEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EEE
T ss_pred ccceEEEEeCCCCEEEEcCCCcEEEeec-CCCcc-eeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ceE
Confidence 445555 677788999999887643222 12211 112 2222222 555543 2 578998664 343 222
Q ss_pred eec-------CCccEEEEEec--CC---CEEEEEcCCCcEEEEeCC---CCccc----------cceEeEEEecCCCEEE
Q 014590 229 IRM-------HCAPVTSLSLS--ED---QLIISGSSLGSIAISGLS---SDQRL----------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 229 ~~~-------~~~~v~~l~~~--~~---~~l~s~~~dg~i~iwd~~---~~~~~----------~~v~~~~~~~~~~~l~ 283 (422)
+.. ....+..+|+. +. -+++....+|.+..|-+. ++... +.+..+.......+|+
T Consensus 144 v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LY 223 (381)
T PF02333_consen 144 VTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLY 223 (381)
T ss_dssp -CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEE
T ss_pred cCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEE
Confidence 221 12346677764 32 366777888988888774 22211 7788888888888999
Q ss_pred EEeCCCeEEEEECCC-----Ceeeeeecc--CCCceeeeeeEe-cCCC-EEE-EEecCCeEEEEECCC-CceEEEeee
Q 014590 284 AGTTAGYASCWDLRT-----MKSLWETRI--SPNVVYSLQHLQ-NDTS-TLV-VGGIDGVLRVLDQNT-GEVLSRCVM 350 (422)
Q Consensus 284 ~g~~dg~i~iwd~~~-----~~~~~~~~~--~~~~v~~l~~~s-~~~~-~l~-s~~~dg~v~vwd~~~-~~~~~~~~~ 350 (422)
.|-++.-|.-|+.+. ++.+....+ ....|-.|+.+. .+++ ||+ |.-.+++..||+... ...+..|..
T Consensus 224 vgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f~i 301 (381)
T PF02333_consen 224 VGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSFRI 301 (381)
T ss_dssp EEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEEEE
T ss_pred EecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceEEe
Confidence 999998888888762 233322222 235677777442 3443 554 444688999999874 345555544
No 471
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.69 E-value=27 Score=33.25 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=48.6
Q ss_pred ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCC
Q 014590 311 VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPP 390 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~ 390 (422)
.|..+. .++.|..++-.+.+|.+.++=.+..-.-..+......+.+-+.+-+..++. ..-.-.
T Consensus 105 eV~~vl-~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ft----------------ss~~lt 167 (741)
T KOG4460|consen 105 EVYQVL-LSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFT----------------SSTSLT 167 (741)
T ss_pred EEEEEE-ecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeec----------------cCCcee
Confidence 466776 889999999999999555442221111122222222121111222222211 001113
Q ss_pred eEEEEec-----CEEEEEEeCCCeEEEEEccCC
Q 014590 391 ITCLAVG-----MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 391 v~~i~~~-----~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+..++|+ +..|+.-+.|..||+|+....
T Consensus 168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred eeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence 4455662 467788888999999998764
No 472
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.46 E-value=28 Score=37.00 Aligned_cols=142 Identities=10% Similarity=0.125 Sum_probs=76.4
Q ss_pred EEEecCCCeEEEecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCC-------eEEEecCCCeEEEEeCC----Cc
Q 014590 157 VDFDFDESKIVGLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDP-------EAVVGCEDGTARVFDMY----SR 223 (422)
Q Consensus 157 ~~~~~~~~~l~~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~l~~~~~d~~i~iwd~~----~~ 223 (422)
+.+-|.=...-.+.|+.+.+|+.+++... +.+....+..+.-+.+-.+ +++.-+.--.|.++-+. ++
T Consensus 84 mGiFpeI~RaWiTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~ 163 (1311)
T KOG1900|consen 84 MGIFPEIGRAWITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTG 163 (1311)
T ss_pred eccchhhcceEEEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccC
Confidence 55555555555777888888888774321 2222222222211212111 12222223344444322 11
Q ss_pred ce---e--eeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC--CC---c-c--c----------------------c
Q 014590 224 KC---S--QIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS--SD---Q-R--L----------------------T 268 (422)
Q Consensus 224 ~~---~--~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~--~~---~-~--~----------------------~ 268 (422)
.. . ..+......|+++....++.+.-++.||.+.-.-.. ++ + + + .
T Consensus 164 ~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~d 243 (1311)
T KOG1900|consen 164 ELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKD 243 (1311)
T ss_pred cccccccceeeecCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCC
Confidence 11 0 112223456788886555555566677755432222 11 1 0 0 5
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
+|..++.....+.+.+-++.|+|.+||+..
T Consensus 244 pI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 244 PIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred cceeeEeccccceeeeeccCceEEEEEccC
Confidence 788899988888999999999999999975
No 473
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=82.20 E-value=65 Score=33.17 Aligned_cols=67 Identities=22% Similarity=0.189 Sum_probs=48.8
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee-c--cCCC----------------ceeeeeeEecCCCEEEEE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET-R--ISPN----------------VVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~--~~~~----------------~v~~l~~~s~~~~~l~s~ 328 (422)
..|.+++...-+.+++....||+|.++|..+.+.+... . .... .+..++ |||++..++.-
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~va-fSPt~c~~v~~ 338 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVA-FSPTMCSLVQI 338 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEE-ECcccceEEEE
Confidence 66777877777889999999999999999887655443 0 0001 223466 88998888888
Q ss_pred ecCCeEE
Q 014590 329 GIDGVLR 335 (422)
Q Consensus 329 ~~dg~v~ 335 (422)
..+|.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 8888755
No 474
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=82.00 E-value=25 Score=31.96 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=50.1
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEeCCCCcc---c-----------cceEeEEEecC---CCEEEEEeC-C--------C
Q 014590 236 VTSLSLSEDQLIISGSSLGSIAISGLSSDQR---L-----------TGIKTLCYNPC---SRLVFAGTT-A--------G 289 (422)
Q Consensus 236 v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~---~-----------~~v~~~~~~~~---~~~l~~g~~-d--------g 289 (422)
.+.|+|.|+..++++...|.|++++ .++.. + .....++++|+ ..+|.+... . .
T Consensus 4 P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~ 82 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDN 82 (331)
T ss_dssp EEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEE
T ss_pred ceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcce
Confidence 4688999885555567799999998 33332 1 66788999994 234433332 1 2
Q ss_pred eEEEEECCCC-------eee-eeecc---CCCceeeeeeEecCCCEEEEEec
Q 014590 290 YASCWDLRTM-------KSL-WETRI---SPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 290 ~i~iwd~~~~-------~~~-~~~~~---~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
.|.-|....+ +.+ ..+.. ....-..|. |.|||.+.++.+.
T Consensus 83 ~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~-fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 83 RVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLA-FGPDGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEE-E-TTSEEEEEEB-
T ss_pred eeEEEeccCCccccccceEEEEEeCCCCCCCCCCcccc-CCCCCcEEEEeCC
Confidence 3443443322 111 11222 123345688 9999976666554
No 475
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=81.97 E-value=39 Score=30.48 Aligned_cols=64 Identities=9% Similarity=-0.023 Sum_probs=32.7
Q ss_pred CCeEEEecC-----CCeEEEEeCCCccee--eeeecCCccEEEEEecCCCEEEEEcCCCc----EEEEeCCCCcc
Q 014590 203 DPEAVVGCE-----DGTARVFDMYSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSSLGS----IAISGLSSDQR 266 (422)
Q Consensus 203 ~~~l~~~~~-----d~~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~dg~----i~iwd~~~~~~ 266 (422)
+...+.|+. ...+..||+.+.+-. ..+......-..++...+.+.+.|+.++. +..||..+.+-
T Consensus 124 ~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 124 GTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred CEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 333455553 246888898766422 21211111111222335677777776543 45788776543
No 476
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=81.93 E-value=4.1 Score=23.09 Aligned_cols=28 Identities=36% Similarity=0.623 Sum_probs=23.3
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeeeccC
Q 014590 281 LVFAGTTAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 281 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
.+++++.+|.|+-.|.++|+.+.+++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 4566789999999999999999887653
No 477
>PF09372 PRANC: PRANC domain; InterPro: IPR018272 This presumed domain is found at the C terminus of a variety of Pox virus proteins. The PRANC (Pox proteins Repeats of ANkyrin, C-terminal) domain is also found on its own in some proteins []. The function of this domain is unknown, but it appears to be related to the F-box domain and may play a similar role.
Probab=81.91 E-value=1.6 Score=31.35 Aligned_cols=26 Identities=23% Similarity=0.091 Sum_probs=23.4
Q ss_pred ccccccCHHHHHHHHcCCChHhHHHH
Q 014590 22 ATIESLNGDIICMIFSSLGFFDLVRC 47 (422)
Q Consensus 22 ~~~~~Lp~e~~~~i~~~l~~~~l~~~ 47 (422)
..+..||.|+-.+|+++|+-.||..+
T Consensus 70 ~~w~~LP~EIk~~Il~~L~~~dL~~l 95 (97)
T PF09372_consen 70 NYWNILPIEIKYKILEYLSNKDLKKL 95 (97)
T ss_pred CchhhCCHHHHHHHHHcCCHHHHHHH
Confidence 56888999999999999999999864
No 478
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=81.75 E-value=8.1 Score=37.93 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=28.1
Q ss_pred ceEeEEEec----CCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 269 GIKTLCYNP----CSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 269 ~v~~~~~~~----~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
.+..+++++ +..++++-+.|+.+++||+.+++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 345556655 6789999999999999999999886554
No 479
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=81.62 E-value=40 Score=30.40 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=62.6
Q ss_pred EEecCCeEEEEecC-----CeEEEEEcCCCeEE---Eeee-CCCcee-eEEEecCCCeEE-Eec-----CCeEEEEECCC
Q 014590 118 CRMKRGLILTGVGD-----KVMRLWSLEGYKCV---EEYS-LPNAAS-LVDFDFDESKIV-GLI-----GTRICIWRRNG 181 (422)
Q Consensus 118 v~~~~~~l~s~~~d-----g~v~iwd~~~~~~~---~~~~-~~~~~~-~~~~~~~~~~l~-~~~-----~~~i~~w~~~~ 181 (422)
+...+.+++.|+.+ ..+..+|+.+.+.. ..+. .+.... ..+...++...+ ++. ...+..||+.+
T Consensus 69 ~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~ 148 (323)
T TIGR03548 69 VSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLET 148 (323)
T ss_pred EEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCC
Confidence 33444455666654 35667777665531 1211 121111 122233555544 443 24688888887
Q ss_pred Ccee-eecCCC-ceeeeEEEeeeCCeEEEecCCC----eEEEEeCCCcceee--eeecCCcc-----EEEEEecCCCEEE
Q 014590 182 LRSV-FPSREG-TFMKGLCMRYFDPEAVVGCEDG----TARVFDMYSRKCSQ--IIRMHCAP-----VTSLSLSEDQLII 248 (422)
Q Consensus 182 ~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~--~~~~~~~~-----v~~l~~~~~~~l~ 248 (422)
.+-. ...... ......+....+...+.|+.++ .+.+||+.+.+-.. .+.....+ ...+....+.+++
T Consensus 149 ~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv 228 (323)
T TIGR03548 149 QEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLC 228 (323)
T ss_pred CCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEE
Confidence 6632 111111 1111222233444466666553 35688887664221 11100011 1223343457788
Q ss_pred EEcCCC
Q 014590 249 SGSSLG 254 (422)
Q Consensus 249 s~~~dg 254 (422)
.|+.++
T Consensus 229 ~GG~~~ 234 (323)
T TIGR03548 229 IGGFNK 234 (323)
T ss_pred ECCcCH
Confidence 887663
No 480
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.46 E-value=61 Score=32.43 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=31.7
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
..+..+. .||+.++|+--..+|.|.+-+....+++..+.
T Consensus 217 ~~~~ki~-VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 217 SSVVKIS-VSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred ceEEEEE-EcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 4566777 89999999999999999998887776666654
No 481
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.27 E-value=37 Score=29.80 Aligned_cols=155 Identities=9% Similarity=0.095 Sum_probs=92.4
Q ss_pred eeccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCC--CceeeEEEecCCCeEEE-ecCCeEEEEECCCC
Q 014590 108 WKAHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIVG-LIGTRICIWRRNGL 182 (422)
Q Consensus 108 l~~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~-~~~~~i~~w~~~~~ 182 (422)
+.|-+..|.++.|+ +. .|++......-.||=...|+.+.++... +....+++.-+|.+.++ -.++.+.++.++..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 45656669999994 44 6666666667777766779999887653 33455777777777664 44677777766544
Q ss_pred ceee---------ec--CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-e--eeeeecCC-------ccEEEEEe
Q 014590 183 RSVF---------PS--REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-C--SQIIRMHC-------APVTSLSL 241 (422)
Q Consensus 183 ~~~~---------~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~--~~~~~~~~-------~~v~~l~~ 241 (422)
..+. .. ..+.....+++.+....++.+-+-+-+.|+....+. . ......+. ..|.++.|
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~ 240 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEF 240 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccccee
Confidence 2211 11 112223466777777777777777777777765332 1 11111111 23566677
Q ss_pred cC--CCEEEEEcCCCcEEEEeCC
Q 014590 242 SE--DQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 242 ~~--~~~l~s~~~dg~i~iwd~~ 262 (422)
++ +.+++-+..++.+.-.|..
T Consensus 241 ~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 241 NAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred cCCCCcEEEEecCCceEEEEecC
Confidence 74 2566666666666666654
No 482
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=81.21 E-value=4.3 Score=21.10 Aligned_cols=26 Identities=8% Similarity=0.197 Sum_probs=21.8
Q ss_pred cceeEEEecCCeEEEEecCCeEEEEE
Q 014590 113 VGVDQCRMKRGLILTGVGDKVMRLWS 138 (422)
Q Consensus 113 ~~v~~v~~~~~~l~s~~~dg~v~iwd 138 (422)
+.|.+++..+++++.+.+-+.+|+|.
T Consensus 2 E~i~aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccCCEEEEEeCCCeEEecC
Confidence 45788888888988888889999874
No 483
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=80.76 E-value=6.5 Score=22.49 Aligned_cols=21 Identities=38% Similarity=0.414 Sum_probs=16.3
Q ss_pred CCCEEEEEecCCeEEEEECCC
Q 014590 321 DTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 321 ~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.+..++.++.||.++.+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 466889999999999999764
No 484
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=80.13 E-value=49 Score=30.52 Aligned_cols=60 Identities=13% Similarity=0.078 Sum_probs=36.0
Q ss_pred eEeEEEecCCCEEEEEeC-------------------CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 270 IKTLCYNPCSRLVFAGTT-------------------AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~-------------------dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
...+++.|||.+.++-+. .|.|.-+|..+++....-.++ .....++ |+++|+++++-..
T Consensus 126 ~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~-rnp~Gl~-~d~~G~l~~tdn~ 203 (367)
T TIGR02604 126 LNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGF-QNPYGHS-VDSWGDVFFCDND 203 (367)
T ss_pred ccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCc-CCCccce-ECCCCCEEEEccC
Confidence 667899999986664441 144666666654432222232 3356788 8999988776443
Q ss_pred C
Q 014590 331 D 331 (422)
Q Consensus 331 d 331 (422)
+
T Consensus 204 ~ 204 (367)
T TIGR02604 204 D 204 (367)
T ss_pred C
Confidence 3
No 485
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=79.84 E-value=33 Score=30.19 Aligned_cols=86 Identities=16% Similarity=0.227 Sum_probs=52.1
Q ss_pred CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEe------CCCeEEEEECCCCeeeeeecc-----CCCceeee
Q 014590 254 GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGT------TAGYASCWDLRTMKSLWETRI-----SPNVVYSL 315 (422)
Q Consensus 254 g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~------~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~l 315 (422)
..|++||..+.+-. +.|+.+.|..+.+.+++|. ....+..||..+..- ..+.. -.++|..+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEEEE
Confidence 45888887765543 8899999986666666664 345688899886532 23333 13678877
Q ss_pred eeEecCCCEEE-EEe-cC--CeEEEEECC
Q 014590 316 QHLQNDTSTLV-VGG-ID--GVLRVLDQN 340 (422)
Q Consensus 316 ~~~s~~~~~l~-s~~-~d--g~v~vwd~~ 340 (422)
.+...|+..+. .|. .+ ..|..||=.
T Consensus 95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs 123 (281)
T PF12768_consen 95 TFISNDGSNFWVAGRSANGSTFLMKYDGS 123 (281)
T ss_pred EeeccCCceEEEeceecCCCceEEEEcCC
Confidence 73444554333 333 23 346666533
No 486
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=79.32 E-value=44 Score=29.46 Aligned_cols=107 Identities=17% Similarity=0.160 Sum_probs=62.7
Q ss_pred CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc------CCCcEEEEeCCCCccc-----------cceEeE
Q 014590 212 DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS------SLGSIAISGLSSDQRL-----------TGIKTL 273 (422)
Q Consensus 212 d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~------~dg~i~iwd~~~~~~~-----------~~v~~~ 273 (422)
-..|.+||..+.+-...-.+-.+.|.++.|..+ +.++.|. ....+..||+.+..-. ++|..+
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence 356899998776644444445688999999855 5666653 3556788887765432 567777
Q ss_pred EEec-CCC-EEEEEe-C--CCeEEEEECCCCeeeee-eccCCCceeeeeeE
Q 014590 274 CYNP-CSR-LVFAGT-T--AGYASCWDLRTMKSLWE-TRISPNVVYSLQHL 318 (422)
Q Consensus 274 ~~~~-~~~-~l~~g~-~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~ 318 (422)
.+.. |+. +.++|. . +..|..||-.+...+.. .......|..+.++
T Consensus 95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~ 145 (281)
T PF12768_consen 95 TFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVL 145 (281)
T ss_pred EeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEE
Confidence 6632 333 444443 2 33467777665554433 22223455555533
No 487
>KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown]
Probab=79.10 E-value=99 Score=33.37 Aligned_cols=74 Identities=11% Similarity=0.076 Sum_probs=43.4
Q ss_pred eeccccceeEEEec---CC--e----EEEEecCCeEEEEEcC-------CCeEEEeeeC----CCceeeEEEecCCCeEE
Q 014590 108 WKAHSVGVDQCRMK---RG--L----ILTGVGDKVMRLWSLE-------GYKCVEEYSL----PNAASLVDFDFDESKIV 167 (422)
Q Consensus 108 l~~H~~~v~~v~~~---~~--~----l~s~~~dg~v~iwd~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~l~ 167 (422)
..||...|.|.... ++ + -+..+.||.+.|=|.+ +|+....++. +.....++++|-...|+
T Consensus 343 gdG~qR~veC~~C~G~a~~~~L~aPvala~a~DGSl~VGDfNyIRRI~~dg~v~tIl~L~~t~~sh~Yy~AvsPvdgtly 422 (1899)
T KOG4659|consen 343 GDGHQRDVECPKCEGKADSISLFAPVALAYAPDGSLIVGDFNYIRRISQDGQVSTILTLGLTDTSHSYYIAVSPVDGTLY 422 (1899)
T ss_pred cCcccccccCCCCCCccccceeeceeeEEEcCCCcEEEccchheeeecCCCceEEEEEecCCCccceeEEEecCcCceEE
Confidence 46788888887652 22 2 2244568888776653 3433333332 22345588888777777
Q ss_pred EecCCeEEEEECCC
Q 014590 168 GLIGTRICIWRRNG 181 (422)
Q Consensus 168 ~~~~~~i~~w~~~~ 181 (422)
.+.-.+=++|.+..
T Consensus 423 vSdp~s~qv~rv~s 436 (1899)
T KOG4659|consen 423 VSDPLSKQVWRVSS 436 (1899)
T ss_pred ecCCCcceEEEecc
Confidence 66666666676543
No 488
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=79.06 E-value=8.9 Score=21.70 Aligned_cols=29 Identities=38% Similarity=0.464 Sum_probs=24.4
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
.++.++.||.|+-.|.++|+.+..+....
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~ 30 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTGP 30 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESSS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCCC
Confidence 45667999999999999999999887643
No 489
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=78.04 E-value=54 Score=29.77 Aligned_cols=67 Identities=16% Similarity=0.043 Sum_probs=38.7
Q ss_pred cceEeEEEec-------CCCEEEEEeCCCeEEEEECCCCeeee---e-eccCCCceeeeeeEecCCCEEEEEecCCeEE
Q 014590 268 TGIKTLCYNP-------CSRLVFAGTTAGYASCWDLRTMKSLW---E-TRISPNVVYSLQHLQNDTSTLVVGGIDGVLR 335 (422)
Q Consensus 268 ~~v~~~~~~~-------~~~~l~~g~~dg~i~iwd~~~~~~~~---~-~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~ 335 (422)
..+..+.|-. .|.++++.-..+.|....+..+..+. . +......+..++ +.|||.+.++-..+|.|+
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~-~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVA-QGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEE-EETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEE-EcCCCeEEEEECCCCeEe
Confidence 3455555542 34456555556778777776443322 1 223334788898 889998877777777664
No 490
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=77.93 E-value=50 Score=29.29 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=55.5
Q ss_pred eEEEeeeCCeEEEecCCCeEEEEeCC------Ccc-eeeeeec-----CCccEEEEEecCC-------------CEEEEE
Q 014590 196 GLCMRYFDPEAVVGCEDGTARVFDMY------SRK-CSQIIRM-----HCAPVTSLSLSED-------------QLIISG 250 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~d~~i~iwd~~------~~~-~~~~~~~-----~~~~v~~l~~~~~-------------~~l~s~ 250 (422)
.+++.+.++.-++....+...+||.. ..+ .+-++.. .....+.+.|+.. ..++.+
T Consensus 27 Gia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif~ 106 (336)
T TIGR03118 27 GLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLFV 106 (336)
T ss_pred eeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEEE
Confidence 44455555556666667788888875 111 2223321 1234455555521 246788
Q ss_pred cCCCcEEEEeCCCCcc------c--------cceEeEEEec--CCCEEEEE-eCCCeEEEEECC
Q 014590 251 SSLGSIAISGLSSDQR------L--------TGIKTLCYNP--CSRLVFAG-TTAGYASCWDLR 297 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~------~--------~~v~~~~~~~--~~~~l~~g-~~dg~i~iwd~~ 297 (422)
++||+|.-|...-+.. + ..-..+++.. .+.+|..+ ..+++|.+||-.
T Consensus 107 tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 107 TEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred eCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 9999999998532222 1 1122344432 24455444 367888888854
No 491
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.53 E-value=28 Score=36.80 Aligned_cols=25 Identities=12% Similarity=0.254 Sum_probs=21.8
Q ss_pred EecCEEEEEEeCCCeEEEEEccCCC
Q 014590 395 AVGMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 395 ~~~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..++..++++..||.+.+||++.+.
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~ 267 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGK 267 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCc
Confidence 4468899999999999999998863
No 492
>PLN02153 epithiospecifier protein
Probab=76.75 E-value=59 Score=29.57 Aligned_cols=62 Identities=8% Similarity=-0.019 Sum_probs=31.1
Q ss_pred CCeEEEEecC-------CeEEEEEcCCCeEEEeeeC---CCc-e-eeEEEecCCCeEE-EecC-----CeEEEEECCCCc
Q 014590 122 RGLILTGVGD-------KVMRLWSLEGYKCVEEYSL---PNA-A-SLVDFDFDESKIV-GLIG-----TRICIWRRNGLR 183 (422)
Q Consensus 122 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~l~-~~~~-----~~i~~w~~~~~~ 183 (422)
+..++.|+.+ ..+.++|+.+.+....-.. +.. . ...+...++..++ |+.+ ..+.+||..+.+
T Consensus 33 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 112 (341)
T PLN02153 33 DKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNE 112 (341)
T ss_pred CEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCCE
Confidence 3355555542 3578889887655432211 111 0 1122233444444 4432 357888888765
No 493
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=76.56 E-value=75 Score=30.63 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=0.0
Q ss_pred EEEe---cCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-----cce----EeE
Q 014590 206 AVVG---CEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-----TGI----KTL 273 (422)
Q Consensus 206 l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~v----~~~ 273 (422)
++.. .......+.|. .|.....+.........+...+++.++.++. ..+..+|+...... ... ..+
T Consensus 118 ~~~~~~~~~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~G~v~~~~~l~~~~~~~HHD~ 195 (477)
T PF05935_consen 118 FVNGNDWDSSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLLGKVIWEYDLPGGYYDFHHDI 195 (477)
T ss_dssp EEEETT--BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT--EEEEEE--TTEE-B-S-E
T ss_pred EEeCCCCCCCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCCCCEEEeeecCCccccccccc
Q ss_pred EEecCCCEEEEEe--------------CCCeEEEEECCCCeeeeeeccCCCc---------------------------e
Q 014590 274 CYNPCSRLVFAGT--------------TAGYASCWDLRTMKSLWETRISPNV---------------------------V 312 (422)
Q Consensus 274 ~~~~~~~~l~~g~--------------~dg~i~iwd~~~~~~~~~~~~~~~~---------------------------v 312 (422)
..-|+|++|+.+. .|. |..+| .+|+.+..+..-.-- +
T Consensus 196 ~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~-Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~ 273 (477)
T PF05935_consen 196 DELPNGNLLILASETKYVDEDKDVDTVEDV-IVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHI 273 (477)
T ss_dssp EE-TTS-EEEEEEETTEE-TS-EE---S-E-EEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--E
T ss_pred EECCCCCEEEEEeecccccCCCCccEecCE-EEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCcccc
Q ss_pred eeeeeEec-CCCEEEEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 313 YSLQHLQN-DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 313 ~~l~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
+++. +.+ ++.+|+|+-.-..|...|.++++....+..+..
T Consensus 274 Nsi~-yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~ 314 (477)
T PF05935_consen 274 NSID-YDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGG 314 (477)
T ss_dssp EEEE-EETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT
T ss_pred CccE-EeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCC
No 494
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=76.50 E-value=36 Score=34.41 Aligned_cols=131 Identities=18% Similarity=0.110 Sum_probs=75.8
Q ss_pred CeEEEecCCeEEEEECCCC--cee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEE--------EeCCCcceeeeeecC
Q 014590 164 SKIVGLIGTRICIWRRNGL--RSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARV--------FDMYSRKCSQIIRMH 232 (422)
Q Consensus 164 ~~l~~~~~~~i~~w~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i--------wd~~~~~~~~~~~~~ 232 (422)
...+++.++.+.++.-..+ +.. ..........+.++.+....+..|.-||++-. ||.+ +...+..-
T Consensus 549 Tic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~e---p~~~~~~g 625 (925)
T KOG3522|consen 549 TICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGE---PNISIPTG 625 (925)
T ss_pred cccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCC---CccccccC
Confidence 3345888888998876522 221 22222222223344433333555555665544 4433 22222334
Q ss_pred CccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe
Q 014590 233 CAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK 300 (422)
Q Consensus 233 ~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 300 (422)
..+|.++++..+ ++.|+.+|.+.++...+.... ..|+++.....|-+++..+.| .+++++..+..
T Consensus 626 ~lPvrsla~~ed--~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~-~~rlfhtetl~ 700 (925)
T KOG3522|consen 626 SLPVRSLAFQED--FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGD-EERLFHTETLW 700 (925)
T ss_pred Cccccchhhhhc--eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCC-EEEEecccccC
Confidence 567777777554 566778999999988765433 789999988777666655544 46666665543
No 495
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=75.68 E-value=17 Score=29.37 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=25.0
Q ss_pred cceEeEEEecCC------CEEEEEeCCCeEEEEECCC
Q 014590 268 TGIKTLCYNPCS------RLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 268 ~~v~~~~~~~~~------~~l~~g~~dg~i~iwd~~~ 298 (422)
..+..++|||.| .+|++-+.+|.|.||....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 478899999865 4788888999999997653
No 496
>KOG4408 consensus Putative Mg2+ and Co2+ transporter CorD [Inorganic ion transport and metabolism]
Probab=74.33 E-value=0.62 Score=40.74 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=48.7
Q ss_pred CccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCCC
Q 014590 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSN 76 (422)
Q Consensus 21 ~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~ 76 (422)
+-.+..||..++..+++++.++++.+++.|+++...+..-..+|+..|.+.+..+.
T Consensus 5 ~~~le~~~~~~l~~vls~~~~~~~~~~a~vs~rLk~~~s~~~lw~r~c~k~l~is~ 60 (386)
T KOG4408|consen 5 PLGLEWLPRDPLHLVLSFLLYRDLINCAYVSRRLKELGSHLPLWNRPCKKYLLISE 60 (386)
T ss_pred ccchhhcccccceeeecccchhhhhcceeechHHhhhhhccccccccccccccccc
Confidence 34567799999999999999999999999999999999999999988877765443
No 497
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=72.97 E-value=31 Score=27.83 Aligned_cols=31 Identities=19% Similarity=0.084 Sum_probs=25.1
Q ss_pred CceeeeeeEecCCC------EEEEEecCCeEEEEECCC
Q 014590 310 NVVYSLQHLQNDTS------TLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 310 ~~v~~l~~~s~~~~------~l~s~~~dg~v~vwd~~~ 341 (422)
..+.+++ |||.|- .|++.+.+|.|.||....
T Consensus 86 ~~vv~~a-WSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAA-WSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEE-ECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 3688888 888543 889999999999998763
No 498
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=72.92 E-value=33 Score=34.67 Aligned_cols=140 Identities=12% Similarity=0.125 Sum_probs=80.9
Q ss_pred CCeEEEecCCCeEEEEeCCCcce---eeee-ecCCccEEEEEecCCCEEEEEcCCCcEEE--------EeCCCCccc---
Q 014590 203 DPEAVVGCEDGTARVFDMYSRKC---SQII-RMHCAPVTSLSLSEDQLIISGSSLGSIAI--------SGLSSDQRL--- 267 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~l~~~~~~~l~s~~~dg~i~i--------wd~~~~~~~--- 267 (422)
.+.+..|+.++.+.++.-..+.. .... ......+.++.++++ .+..|.-||++-. ||..-...+
T Consensus 547 ~PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~-Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g 625 (925)
T KOG3522|consen 547 HPTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG-SLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTG 625 (925)
T ss_pred CCcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc-ccccCccCCccccccCCCCCCCCCCCccccccC
Confidence 34588899999999998653321 1111 122345666666543 2333333443322 666422222
Q ss_pred -cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc---CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 268 -TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI---SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 268 -~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
.++.+.++..| ++.|+.+|.|.++...+....+.+.. |...|+++. ...++-+++-.+.| .++.++.++-.
T Consensus 626 ~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~-~~~~gVwvafasG~-~~rlfhtetl~ 700 (925)
T KOG3522|consen 626 SLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHML-YLDNGVWVAFASGD-EERLFHTETLW 700 (925)
T ss_pred Cccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEE-eeCCceEEEEcCCC-EEEEecccccC
Confidence 67777777544 66677899999999887655555544 446788887 65555455544444 45555665544
Q ss_pred eEEEe
Q 014590 344 VLSRC 348 (422)
Q Consensus 344 ~~~~~ 348 (422)
..+.+
T Consensus 701 hlqd~ 705 (925)
T KOG3522|consen 701 HLQDS 705 (925)
T ss_pred Ccccc
Confidence 44433
No 499
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.90 E-value=85 Score=29.54 Aligned_cols=234 Identities=10% Similarity=0.050 Sum_probs=0.0
Q ss_pred eEEEecCC---eEEEEecCCeEEEEEcCCCeEEEeeeCCCceee--EEEecCCCeEE-EecCCeEEEEEC---CCCceee
Q 014590 116 DQCRMKRG---LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL--VDFDFDESKIV-GLIGTRICIWRR---NGLRSVF 186 (422)
Q Consensus 116 ~~v~~~~~---~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-~~~~~~i~~w~~---~~~~~~~ 186 (422)
+.+.|+|. .+++-|..-+=.+-...+....-.+.......+ +.|++|++.++ -..+.+|.+++. ++.....
T Consensus 26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Q ss_pred ecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC---CEEEEEcCCCcEEEEeCC
Q 014590 187 PSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg~i~iwd~~ 262 (422)
..+......+..+.+.+.. ++.-+..|.=..--....+.++..+.|...|+-..|.++ -+++++-..+++.=+.++
T Consensus 106 ~~ck~k~~~IlGF~W~~s~e~A~i~~~G~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~ 185 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSSTEIAFITDQGIEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFR 185 (657)
T ss_pred HHhccCcceeEEEEEecCeeEEEEecCCeEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEe
Q ss_pred CCccc-------------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCc
Q 014590 263 SDQRL-------------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNV 311 (422)
Q Consensus 263 ~~~~~-------------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 311 (422)
++... +.+.++......+ +|+..-.+.+|+.....+...-..-...
T Consensus 186 ~~~v~kLPkfe~~~p~~~~~~kp~lse~d~~L~tVYG~lyvL~l~~~s~---t~~~~~evHLy~~pr~a~~k~h~l~l~~ 262 (657)
T KOG2377|consen 186 AGTMSKLPKFEIELPAAPKSTKPSLSERDIALATVYGQLYVLFLRHHSR---TSSTGAEVHLYHLPREACKKMHILKLNR 262 (657)
T ss_pred eceeeeccceeecCCCCccCCCCcccccceEEEEEeeEEEEEEEeccCc---cCccceEEEEEecCchhhHHhhhhhhcc
Q ss_pred eeeeeeEecCCCEEEEEecC-CeEEEEECC-CCceEEEeeecCC
Q 014590 312 VYSLQHLQNDTSTLVVGGID-GVLRVLDQN-TGEVLSRCVMDIG 353 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~~~d-g~v~vwd~~-~~~~~~~~~~~~~ 353 (422)
...++ ..--.+.++.--.| ++..+||+. .|+....+..|..
T Consensus 263 ~gkfa-vNvVDNLivVHhqd~~tsiifDi~l~geV~~~it~h~p 305 (657)
T KOG2377|consen 263 TGKFA-LNVVDNLVVVHHQDTETSVIFDIKLRGEVDGSVTFHHP 305 (657)
T ss_pred cccee-eeeeccEEEEEEecCceEEEEEEecCCccccceeeccc
No 500
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=72.76 E-value=81 Score=29.24 Aligned_cols=16 Identities=0% Similarity=-0.024 Sum_probs=12.0
Q ss_pred EEEEecCEEEEEEeCC
Q 014590 392 TCLAVGMKKVVTTHNS 407 (422)
Q Consensus 392 ~~i~~~~~~l~s~s~D 407 (422)
.++.+++..++.||..
T Consensus 338 ~av~~~~~iyv~GG~~ 353 (376)
T PRK14131 338 VSVSWNNGVLLIGGET 353 (376)
T ss_pred EEEEeCCEEEEEcCCC
Confidence 4566788888888864
Done!