Query 014590
Match_columns 422
No_of_seqs 630 out of 4006
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 14:18:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-50 1.1E-54 380.1 47.9 386 21-420 16-445 (445)
2 3v7d_B Cell division control p 100.0 1E-48 3.5E-53 371.9 49.6 385 22-416 13-462 (464)
3 1p22_A F-BOX/WD-repeat protein 100.0 7E-50 2.4E-54 376.7 39.4 354 22-419 9-416 (435)
4 1vyh_C Platelet-activating fac 100.0 1.1E-44 3.7E-49 338.2 37.2 282 97-416 93-410 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 2.2E-43 7.4E-48 321.3 40.6 273 103-414 46-340 (340)
6 3ow8_A WD repeat-containing pr 100.0 1.9E-43 6.4E-48 318.7 39.5 277 102-416 22-320 (321)
7 3iz6_a 40S ribosomal protein R 100.0 1.8E-43 6.2E-48 326.7 36.4 286 102-421 56-379 (380)
8 2ynn_A Coatomer subunit beta'; 100.0 3.8E-42 1.3E-46 308.1 40.0 277 103-418 4-303 (304)
9 2pbi_B Guanine nucleotide-bind 100.0 5.8E-42 2E-46 313.4 40.9 274 103-414 55-354 (354)
10 4g56_B MGC81050 protein; prote 100.0 1.4E-42 4.7E-47 317.8 33.5 276 107-420 37-346 (357)
11 4gqb_B Methylosome protein 50; 100.0 2.7E-42 9.2E-47 313.6 32.7 270 109-418 27-332 (344)
12 4ery_A WD repeat-containing pr 100.0 1.6E-40 5.4E-45 298.8 41.1 281 99-416 10-311 (312)
13 1nr0_A Actin interacting prote 100.0 7.7E-41 2.6E-45 328.0 41.9 242 102-345 49-359 (611)
14 3frx_A Guanine nucleotide-bind 100.0 2.3E-40 7.8E-45 298.5 39.7 283 103-418 8-318 (319)
15 1nr0_A Actin interacting prote 100.0 2.8E-40 9.7E-45 324.0 41.2 310 102-416 180-610 (611)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-40 1.1E-44 300.8 37.1 286 102-420 5-338 (345)
17 4aow_A Guanine nucleotide-bind 100.0 2.3E-39 7.9E-44 294.5 40.8 289 102-420 28-340 (340)
18 1erj_A Transcriptional repress 100.0 2.7E-39 9.1E-44 300.2 40.8 271 108-418 60-390 (393)
19 2ymu_A WD-40 repeat protein; u 100.0 4.3E-39 1.5E-43 314.1 41.7 305 99-414 249-577 (577)
20 2hes_X YDR267CP; beta-propelle 100.0 4.4E-39 1.5E-43 291.5 37.5 280 102-417 4-328 (330)
21 2xzm_R RACK1; ribosome, transl 100.0 1.6E-38 5.3E-43 289.6 38.5 288 102-419 11-342 (343)
22 3odt_A Protein DOA1; ubiquitin 100.0 3.7E-38 1.3E-42 283.0 38.4 279 99-419 5-298 (313)
23 1sq9_A Antiviral protein SKI8; 100.0 3.5E-38 1.2E-42 293.1 34.8 295 103-419 7-397 (397)
24 2ymu_A WD-40 repeat protein; u 100.0 1.9E-37 6.4E-42 302.5 40.9 306 99-416 208-538 (577)
25 3ow8_A WD repeat-containing pr 100.0 8E-38 2.7E-42 281.9 34.8 236 104-340 72-320 (321)
26 3zwl_B Eukaryotic translation 100.0 4.8E-37 1.6E-41 282.1 40.0 280 101-418 21-347 (369)
27 3gre_A Serine/threonine-protei 100.0 9E-39 3.1E-43 301.1 29.2 313 98-414 48-437 (437)
28 1r5m_A SIR4-interacting protei 100.0 1.2E-37 4.1E-42 291.6 35.6 308 107-416 40-424 (425)
29 3ei3_B DNA damage-binding prot 100.0 1.6E-37 5.6E-42 287.3 35.5 278 101-417 62-382 (383)
30 1k8k_C P40, ARP2/3 complex 41 100.0 7.1E-38 2.4E-42 288.3 32.0 306 107-419 3-363 (372)
31 1gxr_A ESG1, transducin-like e 100.0 1.3E-36 4.4E-41 275.8 38.3 272 104-416 43-336 (337)
32 3vl1_A 26S proteasome regulato 100.0 5.1E-37 1.7E-41 287.5 34.7 304 114-418 58-420 (420)
33 3i2n_A WD repeat-containing pr 100.0 4.5E-37 1.6E-41 281.1 33.2 298 104-420 10-356 (357)
34 1vyh_C Platelet-activating fac 100.0 2.4E-37 8.1E-42 288.6 31.4 237 102-340 140-410 (410)
35 3dm0_A Maltose-binding peripla 100.0 5.3E-36 1.8E-40 298.3 41.9 295 101-416 371-692 (694)
36 2j04_B YDR362CP, TAU91; beta p 100.0 5.5E-38 1.9E-42 299.4 26.2 290 125-418 176-518 (524)
37 2pm9_A Protein WEB1, protein t 100.0 7.6E-38 2.6E-42 292.6 25.1 307 111-419 11-416 (416)
38 2ynn_A Coatomer subunit beta'; 100.0 4E-36 1.4E-40 268.9 34.9 238 144-419 5-261 (304)
39 4aez_A CDC20, WD repeat-contai 100.0 1.1E-35 3.8E-40 276.7 38.2 287 97-420 76-383 (401)
40 3k26_A Polycomb protein EED; W 100.0 3.3E-36 1.1E-40 276.3 33.9 273 106-416 12-365 (366)
41 2pm7_B Protein transport prote 100.0 4.4E-36 1.5E-40 267.7 32.5 242 105-418 2-286 (297)
42 1got_B GT-beta; complex (GTP-b 100.0 9.8E-36 3.3E-40 270.8 34.8 235 102-338 87-340 (340)
43 3frx_A Guanine nucleotide-bind 100.0 1E-35 3.6E-40 268.1 34.1 238 102-342 55-318 (319)
44 3dwl_C Actin-related protein 2 100.0 3.8E-37 1.3E-41 284.1 25.1 306 107-415 6-377 (377)
45 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-36 2E-40 316.8 37.4 310 104-419 607-1036(1249)
46 4e54_B DNA damage-binding prot 100.0 2.2E-36 7.7E-41 284.4 30.5 278 104-419 111-432 (435)
47 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-35 2E-39 296.3 41.3 260 103-364 4-282 (814)
48 4gqb_B Methylosome protein 50; 100.0 1E-35 3.6E-40 270.2 31.9 234 107-343 77-333 (344)
49 1yfq_A Cell cycle arrest prote 100.0 1.9E-35 6.5E-40 268.9 33.1 270 106-414 5-321 (342)
50 4a11_B DNA excision repair pro 100.0 3.9E-35 1.3E-39 273.2 35.8 280 103-419 34-367 (408)
51 1pgu_A Actin interacting prote 100.0 8.8E-35 3E-39 285.5 39.9 309 102-418 150-615 (615)
52 4gga_A P55CDC, cell division c 100.0 2.1E-34 7.1E-39 269.8 38.9 264 114-417 107-395 (420)
53 4h5i_A Guanine nucleotide-exch 100.0 7.4E-35 2.5E-39 267.2 34.7 269 112-418 14-344 (365)
54 2oaj_A Protein SNI1; WD40 repe 100.0 6.3E-35 2.1E-39 296.5 36.9 195 107-303 12-247 (902)
55 2xzm_R RACK1; ribosome, transl 100.0 1.4E-34 4.9E-39 263.4 34.0 239 102-343 66-342 (343)
56 1erj_A Transcriptional repress 100.0 1.4E-34 4.9E-39 268.3 33.6 228 114-342 125-390 (393)
57 2oaj_A Protein SNI1; WD40 repe 100.0 2E-34 6.7E-39 292.9 37.1 307 109-418 55-606 (902)
58 4ggc_A P55CDC, cell division c 100.0 2E-33 6.7E-38 252.8 39.4 265 115-419 28-317 (318)
59 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-34 6.2E-39 305.4 37.0 315 102-419 689-1160(1249)
60 3bg1_A Protein SEC13 homolog; 100.0 3.4E-35 1.2E-39 264.3 26.7 238 106-418 7-294 (316)
61 2pbi_B Guanine nucleotide-bind 100.0 2.6E-34 9E-39 262.6 32.8 235 102-338 96-354 (354)
62 4g56_B MGC81050 protein; prote 100.0 8.2E-35 2.8E-39 266.2 29.0 237 105-344 87-346 (357)
63 3dw8_B Serine/threonine-protei 100.0 2.1E-33 7.1E-38 265.1 36.3 299 110-416 26-445 (447)
64 3mmy_A MRNA export factor; mRN 100.0 9E-34 3.1E-38 260.1 32.0 276 102-416 29-345 (368)
65 1pgu_A Actin interacting prote 100.0 4.4E-34 1.5E-38 280.5 31.9 258 109-372 15-327 (615)
66 3iz6_a 40S ribosomal protein R 100.0 2.4E-34 8.1E-39 265.7 26.9 256 133-419 47-331 (380)
67 3jrp_A Fusion protein of prote 100.0 7.1E-34 2.4E-38 262.0 29.8 246 103-418 2-288 (379)
68 3f3f_A Nucleoporin SEH1; struc 100.0 2.6E-33 8.9E-38 254.8 32.8 273 106-420 5-340 (351)
69 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-33 6.6E-38 256.1 31.4 256 142-418 5-284 (345)
70 1gxr_A ESG1, transducin-like e 100.0 8.5E-33 2.9E-37 250.6 33.4 270 111-419 8-298 (337)
71 4ery_A WD repeat-containing pr 100.0 2.2E-32 7.4E-37 245.7 35.5 243 142-419 13-270 (312)
72 3vl1_A 26S proteasome regulato 100.0 1.3E-33 4.6E-38 264.2 28.3 261 155-418 60-366 (420)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-32 4.2E-37 259.8 33.2 269 141-419 107-393 (445)
74 3vu4_A KMHSV2; beta-propeller 100.0 3.6E-32 1.2E-36 248.6 35.1 294 103-419 10-338 (355)
75 2hes_X YDR267CP; beta-propelle 100.0 1.5E-32 5.1E-37 248.6 31.8 248 141-418 3-281 (330)
76 4aow_A Guanine nucleotide-bind 100.0 4.9E-32 1.7E-36 246.1 35.0 240 102-343 76-339 (340)
77 3v7d_B Cell division control p 100.0 5.7E-32 1.9E-36 256.6 35.9 251 101-356 151-437 (464)
78 3zwl_B Eukaryotic translation 100.0 2.3E-32 7.7E-37 250.9 30.7 247 101-348 63-353 (369)
79 1r5m_A SIR4-interacting protei 100.0 4.5E-32 1.5E-36 253.8 33.3 251 111-365 107-407 (425)
80 3gre_A Serine/threonine-protei 100.0 3.9E-33 1.3E-37 262.6 26.0 271 136-419 47-361 (437)
81 4gga_A P55CDC, cell division c 100.0 4.9E-32 1.7E-36 253.7 33.3 241 107-350 142-404 (420)
82 3dm0_A Maltose-binding peripla 100.0 5E-32 1.7E-36 269.7 35.1 235 104-340 422-692 (694)
83 2pm9_A Protein WEB1, protein t 100.0 4.5E-32 1.5E-36 253.4 28.6 234 110-344 65-340 (416)
84 4aez_A CDC20, WD repeat-contai 100.0 5.1E-31 1.7E-35 245.3 32.1 242 104-349 125-388 (401)
85 3k26_A Polycomb protein EED; W 100.0 8.1E-32 2.8E-36 247.0 26.3 228 111-340 68-365 (366)
86 3jro_A Fusion protein of prote 100.0 4.5E-32 1.6E-36 271.7 26.7 245 105-419 2-287 (753)
87 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-31 1.1E-35 268.9 33.0 240 101-343 44-304 (814)
88 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-31 7E-36 245.0 28.5 239 104-343 44-363 (372)
89 1sq9_A Antiviral protein SKI8; 100.0 2E-31 6.7E-36 247.5 28.2 238 104-343 54-397 (397)
90 4h5i_A Guanine nucleotide-exch 100.0 3E-31 1E-35 243.3 28.9 235 106-342 67-344 (365)
91 4ggc_A P55CDC, cell division c 100.0 1.9E-30 6.4E-35 233.3 33.1 234 107-343 62-317 (318)
92 4a11_B DNA excision repair pro 100.0 1E-30 3.4E-35 243.3 31.8 272 110-420 97-408 (408)
93 1p22_A F-BOX/WD-repeat protein 100.0 5.3E-31 1.8E-35 247.8 29.7 239 102-347 163-420 (435)
94 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-31 7.8E-36 242.3 25.6 230 121-420 46-295 (343)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.8E-30 2E-34 241.8 35.5 268 112-418 4-392 (450)
96 3i2n_A WD repeat-containing pr 100.0 4.9E-31 1.7E-35 241.0 26.8 236 107-344 60-356 (357)
97 2xyi_A Probable histone-bindin 100.0 2.2E-30 7.6E-35 243.1 31.6 252 104-417 120-410 (430)
98 1l0q_A Surface layer protein; 100.0 9.3E-29 3.2E-33 229.1 41.8 248 102-353 22-287 (391)
99 2w18_A PALB2, fancn, partner a 100.0 3.8E-30 1.3E-34 225.7 30.3 272 102-416 25-356 (356)
100 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-31 6.1E-36 254.5 23.4 219 161-417 171-428 (524)
101 1l0q_A Surface layer protein; 100.0 4.1E-29 1.4E-33 231.5 37.5 256 124-419 4-277 (391)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 7.8E-31 2.7E-35 244.1 25.7 267 114-418 36-343 (402)
103 3ei3_B DNA damage-binding prot 100.0 4.6E-30 1.6E-34 237.3 30.6 227 108-341 114-382 (383)
104 4e54_B DNA damage-binding prot 100.0 7.6E-31 2.6E-35 246.7 25.4 240 104-345 156-434 (435)
105 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-29 3.6E-34 227.8 31.6 241 101-349 48-304 (313)
106 3vu4_A KMHSV2; beta-propeller 100.0 3E-29 1E-33 229.2 31.0 242 136-418 3-272 (355)
107 3dwl_C Actin-related protein 2 100.0 9.1E-31 3.1E-35 241.4 21.1 225 152-416 12-280 (377)
108 2j04_A TAU60, YPL007P, hypothe 100.0 4.4E-30 1.5E-34 239.5 24.2 249 110-416 13-296 (588)
109 1yfq_A Cell cycle arrest prote 100.0 1.1E-28 3.7E-33 224.2 30.5 237 152-419 12-284 (342)
110 3dw8_B Serine/threonine-protei 100.0 1.2E-29 4E-34 239.3 24.6 245 151-419 28-375 (447)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-29 6.6E-34 234.7 24.1 239 104-345 73-346 (402)
112 3bws_A Protein LP49; two-domai 100.0 1.2E-27 4E-32 224.8 36.3 273 103-416 114-431 (433)
113 4gq1_A NUP37; propeller, trans 100.0 1.6E-28 5.3E-33 227.6 29.8 219 160-415 98-387 (393)
114 2pm7_B Protein transport prote 100.0 2.5E-28 8.4E-33 217.5 28.3 187 195-418 13-239 (297)
115 2j04_A TAU60, YPL007P, hypothe 100.0 8.5E-30 2.9E-34 237.6 18.5 273 106-406 46-350 (588)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.9E-28 3.1E-32 226.8 31.3 250 153-415 6-337 (450)
117 3mmy_A MRNA export factor; mRN 100.0 6.5E-28 2.2E-32 221.0 28.6 235 103-340 77-345 (368)
118 3bg1_A Protein SEC13 homolog; 100.0 7.6E-28 2.6E-32 216.3 23.5 198 104-340 49-292 (316)
119 2w18_A PALB2, fancn, partner a 100.0 5.2E-27 1.8E-31 205.9 25.8 167 171-339 156-355 (356)
120 3f3f_A Nucleoporin SEH1; struc 100.0 9.8E-27 3.4E-31 211.3 27.2 246 103-349 48-345 (351)
121 1nir_A Nitrite reductase; hemo 100.0 3.5E-25 1.2E-29 212.7 37.4 295 121-419 147-516 (543)
122 3jrp_A Fusion protein of prote 100.0 2.3E-26 7.7E-31 211.7 27.1 206 101-345 44-291 (379)
123 4gq1_A NUP37; propeller, trans 100.0 5.5E-27 1.9E-31 217.2 22.7 228 110-340 87-388 (393)
124 3bws_A Protein LP49; two-domai 99.9 3E-25 1E-29 208.3 31.5 231 107-340 164-431 (433)
125 3lrv_A PRE-mRNA-splicing facto 99.9 1.4E-25 4.7E-30 204.0 26.9 222 112-340 76-332 (343)
126 2xyi_A Probable histone-bindin 99.9 8.1E-25 2.8E-29 205.2 26.1 201 102-342 171-411 (430)
127 3jro_A Fusion protein of prote 99.9 3.9E-25 1.3E-29 221.5 24.2 203 102-343 43-287 (753)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-23 5.7E-28 195.0 28.4 266 111-418 61-388 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.1E-23 1.4E-27 192.4 28.8 242 106-353 111-398 (415)
130 1pby_B Quinohemoprotein amine 99.9 5.2E-23 1.8E-27 186.1 27.5 253 124-419 3-312 (337)
131 3u4y_A Uncharacterized protein 99.9 4.6E-22 1.6E-26 179.7 33.6 263 124-418 12-305 (331)
132 3vgz_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 175.1 34.3 237 111-350 39-312 (353)
133 2ecf_A Dipeptidyl peptidase IV 99.9 6E-22 2E-26 198.7 29.2 234 112-349 36-375 (741)
134 1ri6_A Putative isomerase YBHE 99.9 2.3E-21 7.8E-26 175.7 29.5 254 124-416 7-307 (343)
135 1nir_A Nitrite reductase; hemo 99.9 2.8E-21 9.5E-26 185.6 31.4 262 102-366 169-492 (543)
136 2ojh_A Uncharacterized protein 99.9 1.2E-21 4E-26 173.5 24.4 217 127-346 17-263 (297)
137 2z3z_A Dipeptidyl aminopeptida 99.9 4E-21 1.4E-25 191.7 30.6 267 113-419 82-437 (706)
138 1k32_A Tricorn protease; prote 99.9 4.8E-21 1.6E-25 198.9 32.0 270 104-415 195-500 (1045)
139 1k32_A Tricorn protease; prote 99.9 4.9E-21 1.7E-25 198.8 30.1 230 104-340 237-501 (1045)
140 1pby_B Quinohemoprotein amine 99.9 2.7E-20 9.1E-25 168.2 29.2 241 103-352 22-321 (337)
141 1ri6_A Putative isomerase YBHE 99.9 9.3E-20 3.2E-24 165.1 32.0 233 109-343 34-312 (343)
142 3o4h_A Acylamino-acid-releasin 99.9 7.8E-21 2.7E-25 185.2 25.7 224 112-345 21-278 (582)
143 3u4y_A Uncharacterized protein 99.9 1.2E-19 4.1E-24 163.7 31.0 240 102-343 30-306 (331)
144 1jmx_B Amine dehydrogenase; ox 99.9 3.9E-20 1.3E-24 168.0 27.9 227 118-351 5-335 (349)
145 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-20 4E-25 188.3 25.0 247 98-351 13-353 (706)
146 1xfd_A DIP, dipeptidyl aminope 99.9 7.4E-21 2.5E-25 190.2 23.6 222 114-338 18-341 (723)
147 2ojh_A Uncharacterized protein 99.9 6.4E-20 2.2E-24 162.3 26.0 227 103-332 32-293 (297)
148 2ecf_A Dipeptidyl peptidase IV 99.9 3.5E-20 1.2E-24 185.9 27.0 232 114-348 110-421 (741)
149 3vgz_A Uncharacterized protein 99.9 4.1E-19 1.4E-23 161.6 30.3 201 149-350 38-271 (353)
150 3hfq_A Uncharacterized protein 99.9 2.3E-18 7.8E-23 156.5 32.6 250 131-417 15-317 (347)
151 3hfq_A Uncharacterized protein 99.8 5.5E-18 1.9E-22 154.0 32.1 238 107-345 34-323 (347)
152 1jmx_B Amine dehydrogenase; ox 99.8 1.1E-18 3.7E-23 158.5 23.7 220 157-419 5-327 (349)
153 2oit_A Nucleoporin 214KDA; NH2 99.8 2.1E-19 7.3E-24 167.9 19.4 192 195-418 40-279 (434)
154 1z68_A Fibroblast activation p 99.8 6.4E-19 2.2E-23 176.1 24.1 225 117-343 20-348 (719)
155 3scy_A Hypothetical bacterial 99.8 6E-17 2E-21 148.0 33.6 253 124-417 15-337 (361)
156 2oit_A Nucleoporin 214KDA; NH2 99.8 7.9E-19 2.7E-23 164.0 20.3 145 196-342 97-279 (434)
157 1xfd_A DIP, dipeptidyl aminope 99.8 3.8E-18 1.3E-22 170.6 25.0 263 103-367 48-424 (723)
158 3scy_A Hypothetical bacterial 99.8 1.3E-16 4.3E-21 145.8 32.4 232 111-346 48-344 (361)
159 3pe7_A Oligogalacturonate lyas 99.8 5.1E-17 1.7E-21 149.9 28.6 290 101-419 19-384 (388)
160 2oiz_A Aromatic amine dehydrog 99.8 8.7E-17 3E-21 146.6 27.0 244 102-353 41-348 (361)
161 3o4h_A Acylamino-acid-releasin 99.8 1.5E-17 5E-22 162.1 22.3 252 153-416 23-314 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.7E-16 2.6E-20 140.8 30.8 220 124-345 4-296 (365)
163 1z68_A Fibroblast activation p 99.8 6E-17 2E-21 161.8 25.1 236 102-340 46-390 (719)
164 4a5s_A Dipeptidyl peptidase 4 99.8 2.9E-16 9.8E-21 157.2 29.1 228 114-345 18-357 (740)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.8E-16 1.3E-20 142.9 25.1 230 111-342 38-342 (365)
166 3fvz_A Peptidyl-glycine alpha- 99.7 4.5E-15 1.5E-19 133.7 30.2 177 206-418 105-323 (329)
167 3azo_A Aminopeptidase; POP fam 99.7 1.4E-15 4.7E-20 150.5 28.8 240 106-349 17-332 (662)
168 3c5m_A Oligogalacturonate lyas 99.7 8.4E-16 2.9E-20 141.9 25.2 237 103-344 21-332 (396)
169 1q7f_A NHL, brain tumor CG1071 99.7 9.3E-15 3.2E-19 128.8 29.4 229 109-342 26-281 (286)
170 1qks_A Cytochrome CD1 nitrite 99.7 1.2E-13 4.3E-18 132.3 38.6 294 124-419 169-540 (567)
171 3dsm_A Uncharacterized protein 99.7 8E-15 2.7E-19 131.9 28.7 231 114-351 45-311 (328)
172 1q7f_A NHL, brain tumor CG1071 99.7 4.7E-14 1.6E-18 124.3 32.6 226 153-418 31-281 (286)
173 3no2_A Uncharacterized protein 99.7 8.1E-15 2.8E-19 128.1 25.6 227 122-353 5-264 (276)
174 2oiz_A Aromatic amine dehydrog 99.7 1.4E-14 4.9E-19 131.9 27.2 246 130-418 29-335 (361)
175 2gop_A Trilobed protease; beta 99.7 2.6E-14 9E-19 129.5 28.0 253 113-416 15-330 (347)
176 3dsm_A Uncharacterized protein 99.7 4.3E-14 1.5E-18 127.1 27.5 245 131-416 16-301 (328)
177 3pe7_A Oligogalacturonate lyas 99.7 4.9E-14 1.7E-18 129.8 26.0 209 135-345 13-277 (388)
178 4a5s_A Dipeptidyl peptidase 4 99.6 2.5E-14 8.6E-19 143.1 23.5 186 154-343 19-296 (740)
179 2dg1_A DRP35, lactonase; beta 99.6 3.2E-13 1.1E-17 121.7 28.3 232 113-350 6-271 (333)
180 2z2n_A Virginiamycin B lyase; 99.6 1.8E-11 6.1E-16 108.1 38.5 231 107-343 9-256 (299)
181 3azo_A Aminopeptidase; POP fam 99.6 5.3E-13 1.8E-17 131.9 30.8 239 104-346 59-374 (662)
182 2xdw_A Prolyl endopeptidase; a 99.6 2.9E-13 1E-17 134.8 29.0 232 110-343 122-416 (710)
183 3e5z_A Putative gluconolactona 99.6 1.1E-12 3.7E-17 116.1 29.5 237 98-344 13-289 (296)
184 3q7m_A Lipoprotein YFGL, BAMB; 99.6 1.5E-12 5.1E-17 119.4 30.7 257 118-414 99-375 (376)
185 1rwi_B Serine/threonine-protei 99.6 4.2E-13 1.4E-17 116.9 25.7 230 114-344 25-267 (270)
186 3no2_A Uncharacterized protein 99.6 7.3E-13 2.5E-17 115.7 26.5 181 163-350 5-204 (276)
187 3c5m_A Oligogalacturonate lyas 99.6 9E-14 3.1E-18 128.3 21.2 210 135-346 13-278 (396)
188 1rwi_B Serine/threonine-protei 99.6 1.2E-12 4E-17 114.1 27.0 228 153-419 25-266 (270)
189 2dg1_A DRP35, lactonase; beta 99.6 8.9E-12 3.1E-16 112.1 32.2 228 102-332 34-301 (333)
190 2xdw_A Prolyl endopeptidase; a 99.6 1.4E-12 4.6E-17 130.0 29.3 196 154-351 127-378 (710)
191 3e5z_A Putative gluconolactona 99.6 4E-12 1.4E-16 112.4 29.3 193 152-350 28-254 (296)
192 2mad_H Methylamine dehydrogena 99.6 1.9E-11 6.6E-16 111.4 33.9 242 133-419 48-352 (373)
193 2bkl_A Prolyl endopeptidase; m 99.6 2.7E-13 9.1E-18 134.7 23.0 231 110-344 118-400 (695)
194 3sjl_D Methylamine dehydrogena 99.6 1E-11 3.4E-16 112.0 29.0 256 121-419 42-365 (386)
195 2bkl_A Prolyl endopeptidase; m 99.5 2E-12 6.7E-17 128.5 26.8 207 154-364 123-374 (695)
196 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1E-11 3.5E-16 113.8 29.5 222 119-349 50-304 (376)
197 2mad_H Methylamine dehydrogena 99.5 5.7E-11 1.9E-15 108.3 33.5 236 104-348 59-357 (373)
198 3sjl_D Methylamine dehydrogena 99.5 1.1E-11 3.9E-16 111.6 27.9 241 104-351 71-373 (386)
199 2qc5_A Streptogramin B lactona 99.5 3.7E-10 1.3E-14 99.6 36.6 231 107-344 14-262 (300)
200 1kb0_A Quinohemoprotein alcoho 99.5 1.2E-11 4.3E-16 121.6 28.9 262 120-420 75-510 (677)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.6E-11 8.8E-16 108.0 28.2 232 106-341 11-299 (314)
202 2gop_A Trilobed protease; beta 99.5 1.6E-11 5.3E-16 111.2 25.5 218 113-350 59-338 (347)
203 1yiq_A Quinohemoprotein alcoho 99.5 2.6E-11 8.9E-16 119.6 28.6 184 120-304 68-344 (689)
204 3hrp_A Uncharacterized protein 99.5 1.1E-10 3.6E-15 108.0 30.4 224 113-339 131-408 (409)
205 1qks_A Cytochrome CD1 nitrite 99.5 1.4E-10 4.9E-15 111.1 31.7 235 114-350 198-547 (567)
206 1kb0_A Quinohemoprotein alcoho 99.5 8.5E-11 2.9E-15 115.7 30.9 232 118-352 124-518 (677)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.1E-10 3.8E-15 103.9 28.7 227 153-418 19-300 (314)
208 3c75_H MADH, methylamine dehyd 99.5 8.7E-11 3E-15 107.8 28.1 245 132-419 99-404 (426)
209 1xip_A Nucleoporin NUP159; bet 99.5 5.5E-12 1.9E-16 114.2 19.7 166 153-327 39-230 (388)
210 3c75_H MADH, methylamine dehyd 99.5 1E-10 3.5E-15 107.3 28.0 238 104-348 111-409 (426)
211 1yr2_A Prolyl oligopeptidase; 99.4 2E-11 6.8E-16 122.1 25.3 192 154-349 165-402 (741)
212 3fvz_A Peptidyl-glycine alpha- 99.4 2.5E-10 8.5E-15 102.5 28.0 178 153-350 25-236 (329)
213 2hz6_A Endoplasmic reticulum t 99.4 1.8E-13 6.1E-18 125.0 7.2 252 120-417 7-279 (369)
214 2z2n_A Virginiamycin B lyase; 99.4 1.7E-09 6E-14 95.2 32.8 226 110-343 54-297 (299)
215 1yr2_A Prolyl oligopeptidase; 99.4 3.9E-11 1.3E-15 120.0 24.4 231 110-343 160-443 (741)
216 1yiq_A Quinohemoprotein alcoho 99.4 4.2E-10 1.4E-14 110.9 30.5 234 118-353 117-517 (689)
217 3hxj_A Pyrrolo-quinoline quino 99.4 1.5E-11 5.2E-16 110.4 18.5 288 116-419 23-326 (330)
218 1fs1_A SKP2 F-BOX, cyclin A/CD 99.4 2.6E-13 8.9E-18 85.3 4.3 49 19-67 4-52 (53)
219 3g4e_A Regucalcin; six bladed 99.4 1.3E-09 4.4E-14 96.3 29.7 218 108-330 8-261 (297)
220 1mda_H Methylamine dehydrogena 99.4 8.7E-11 3E-15 106.0 22.1 238 102-353 56-358 (368)
221 3hrp_A Uncharacterized protein 99.4 9E-10 3.1E-14 101.8 28.0 237 154-416 133-409 (409)
222 3g4e_A Regucalcin; six bladed 99.3 4.3E-09 1.5E-13 92.9 29.3 193 154-351 15-239 (297)
223 1kv9_A Type II quinohemoprotei 99.3 1.2E-09 3.9E-14 107.5 27.3 184 120-305 64-340 (668)
224 3dr2_A Exported gluconolactona 99.3 2.1E-09 7.1E-14 95.3 26.1 228 101-338 33-303 (305)
225 2qc5_A Streptogramin B lactona 99.3 1.2E-08 4.2E-13 89.7 30.7 188 152-345 20-221 (300)
226 2hz6_A Endoplasmic reticulum t 99.3 1.4E-12 4.7E-17 119.1 3.6 141 202-350 8-158 (369)
227 2ghs_A AGR_C_1268P; regucalcin 99.3 2.2E-08 7.4E-13 89.6 30.5 211 114-331 50-292 (326)
228 3iuj_A Prolyl endopeptidase; h 99.3 1.3E-09 4.5E-14 108.0 24.2 230 110-344 126-408 (693)
229 2ad6_A Methanol dehydrogenase 99.2 1.2E-08 4E-13 98.3 29.5 185 120-306 60-343 (571)
230 2qe8_A Uncharacterized protein 99.2 2.5E-09 8.4E-14 96.6 23.2 223 113-344 17-281 (343)
231 1mda_H Methylamine dehydrogena 99.2 4.3E-09 1.5E-13 94.9 24.3 245 124-419 34-348 (368)
232 1xip_A Nucleoporin NUP159; bet 99.2 2.1E-10 7.1E-15 103.8 15.7 142 194-349 40-201 (388)
233 1w6s_A Methanol dehydrogenase 99.2 2.2E-08 7.4E-13 96.5 30.3 185 121-306 61-350 (599)
234 2ghs_A AGR_C_1268P; regucalcin 99.2 3.3E-08 1.1E-12 88.4 29.1 189 155-350 52-268 (326)
235 3hxj_A Pyrrolo-quinoline quino 99.2 8.8E-10 3E-14 98.8 18.2 246 108-368 55-310 (330)
236 2ad6_A Methanol dehydrogenase 99.2 4.3E-08 1.5E-12 94.4 30.6 231 118-351 111-504 (571)
237 1flg_A Protein (quinoprotein e 99.2 8.2E-08 2.8E-12 92.5 31.6 186 120-307 66-364 (582)
238 3nol_A Glutamine cyclotransfer 99.2 2.8E-08 9.5E-13 83.8 23.9 181 104-287 33-244 (262)
239 3iuj_A Prolyl endopeptidase; h 99.1 2E-08 6.9E-13 99.5 25.7 189 155-349 132-366 (693)
240 3l2o_B F-box only protein 4; s 99.1 3.3E-11 1.1E-15 101.6 4.6 52 21-72 2-53 (312)
241 1w6s_A Methanol dehydrogenase 99.1 3.5E-07 1.2E-11 88.1 32.8 225 125-352 124-514 (599)
242 3dr2_A Exported gluconolactona 99.1 8.8E-08 3E-12 84.8 26.8 193 152-350 45-275 (305)
243 1kv9_A Type II quinohemoprotei 99.1 1.3E-07 4.5E-12 92.9 29.9 232 119-352 114-499 (668)
244 3mbr_X Glutamine cyclotransfer 99.1 1.3E-07 4.4E-12 79.1 24.9 181 104-287 11-223 (243)
245 2iwa_A Glutamine cyclotransfer 99.1 1.7E-07 5.8E-12 80.0 26.0 194 104-299 11-238 (266)
246 3nok_A Glutaminyl cyclase; bet 99.0 7.7E-08 2.6E-12 81.1 21.8 179 104-286 45-253 (268)
247 4a2l_A BT_4663, two-component 99.0 6.5E-06 2.2E-10 82.9 38.5 297 115-417 175-526 (795)
248 1fwx_A Nitrous oxide reductase 99.0 6E-08 2.1E-12 91.3 20.5 240 124-366 17-401 (595)
249 1flg_A Protein (quinoprotein e 99.0 3.4E-07 1.2E-11 88.2 25.6 231 119-352 114-527 (582)
250 2iwa_A Glutamine cyclotransfer 98.9 1.1E-06 3.7E-11 75.0 25.6 198 142-342 9-238 (266)
251 2ece_A 462AA long hypothetical 98.9 7.5E-07 2.6E-11 81.0 25.7 204 124-329 98-399 (462)
252 2qe8_A Uncharacterized protein 98.9 1.6E-07 5.6E-12 84.6 21.0 213 110-337 64-317 (343)
253 4a2l_A BT_4663, two-component 98.9 1.2E-05 4.3E-10 80.9 36.7 295 113-417 263-614 (795)
254 3nol_A Glutamine cyclotransfer 98.9 1.7E-06 6E-11 72.9 24.8 183 143-330 32-244 (262)
255 2ece_A 462AA long hypothetical 98.9 3.6E-06 1.2E-10 76.6 28.2 188 161-350 93-364 (462)
256 2e31_A FBS1, F-box only protei 98.9 1.4E-09 4.7E-14 93.2 5.6 66 22-87 49-119 (297)
257 1npe_A Nidogen, entactin; glyc 98.9 1.7E-05 5.7E-10 68.5 31.2 223 124-350 3-247 (267)
258 3nok_A Glutaminyl cyclase; bet 98.8 1.7E-06 5.9E-11 72.9 22.5 182 143-329 44-253 (268)
259 1fwx_A Nitrous oxide reductase 98.8 1.5E-07 5.2E-12 88.6 17.3 226 116-343 90-433 (595)
260 2fp8_A Strictosidine synthase; 98.8 7.7E-06 2.6E-10 72.8 27.4 230 154-419 21-315 (322)
261 3mbr_X Glutamine cyclotransfer 98.8 1.4E-05 4.8E-10 66.7 26.2 183 142-330 9-223 (243)
262 1npe_A Nidogen, entactin; glyc 98.8 3.5E-05 1.2E-09 66.4 29.2 175 165-342 3-199 (267)
263 3v9f_A Two-component system se 98.7 3.6E-05 1.2E-09 77.3 33.1 227 113-343 258-526 (781)
264 2p4o_A Hypothetical protein; p 98.7 8.5E-05 2.9E-09 65.5 29.6 223 103-332 23-279 (306)
265 3v9f_A Two-component system se 98.6 0.00012 4E-09 73.6 33.3 227 113-344 211-481 (781)
266 2fp8_A Strictosidine synthase; 98.6 9.8E-05 3.4E-09 65.5 27.6 229 107-340 13-312 (322)
267 3v65_B Low-density lipoprotein 98.5 0.00032 1.1E-08 64.0 30.4 234 114-350 78-327 (386)
268 3v64_C Agrin; beta propeller, 98.5 0.00045 1.5E-08 62.0 32.4 236 112-350 33-284 (349)
269 1ijq_A LDL receptor, low-densi 98.4 0.00098 3.4E-08 58.9 32.6 216 132-350 10-247 (316)
270 1k3i_A Galactose oxidase precu 98.4 2.8E-05 9.7E-10 76.4 20.2 221 122-343 197-499 (656)
271 3v65_B Low-density lipoprotein 98.3 0.0018 6E-08 59.0 30.3 177 164-341 88-277 (386)
272 3p5b_L Low density lipoprotein 98.3 0.002 6.7E-08 59.0 32.1 224 124-350 85-329 (400)
273 1k3i_A Galactose oxidase precu 98.3 6.6E-05 2.2E-09 73.8 20.2 202 141-343 175-443 (656)
274 3v64_C Agrin; beta propeller, 98.3 0.002 6.9E-08 57.7 31.0 175 165-341 46-234 (349)
275 3sov_A LRP-6, low-density lipo 98.2 0.0022 7.5E-08 56.6 28.1 217 131-350 12-247 (318)
276 2p4o_A Hypothetical protein; p 98.2 0.0023 8E-08 56.1 28.4 198 141-344 21-244 (306)
277 1ijq_A LDL receptor, low-densi 98.2 0.003 1E-07 55.7 32.6 181 165-348 3-201 (316)
278 4hw6_A Hypothetical protein, I 98.2 0.0043 1.5E-07 57.3 28.8 222 114-340 140-432 (433)
279 3p5b_L Low density lipoprotein 98.1 0.0051 1.7E-07 56.2 32.6 182 165-348 85-283 (400)
280 3amr_A 3-phytase; beta-propell 98.1 0.0016 5.5E-08 57.4 22.3 130 206-340 43-209 (355)
281 3tc9_A Hypothetical hydrolase; 98.1 0.004 1.4E-07 57.5 26.1 222 114-340 138-429 (430)
282 3m0c_C LDL receptor, low-densi 98.0 0.014 4.7E-07 58.1 31.9 223 124-349 397-640 (791)
283 1n7d_A LDL receptor, low-densi 98.0 0.00029 9.8E-09 69.5 17.9 218 131-350 385-623 (699)
284 3qqz_A Putative uncharacterize 98.0 0.005 1.7E-07 52.0 23.0 188 106-296 20-251 (255)
285 2be1_A Serine/threonine-protei 97.9 0.00081 2.8E-08 59.4 18.1 179 122-303 10-236 (339)
286 2ast_B S-phase kinase-associat 97.9 3E-06 1E-10 75.9 2.6 48 20-67 5-52 (336)
287 1bpo_A Protein (clathrin); cla 97.9 0.011 3.7E-07 53.4 27.8 215 124-342 79-332 (494)
288 3sov_A LRP-6, low-density lipo 97.9 0.0093 3.2E-07 52.5 28.4 173 166-340 7-196 (318)
289 4hw6_A Hypothetical protein, I 97.9 0.012 4.2E-07 54.2 26.8 239 155-416 142-432 (433)
290 3qqz_A Putative uncharacterize 97.9 0.0071 2.4E-07 51.1 23.5 183 154-340 29-252 (255)
291 2xzh_A Clathrin heavy chain 1; 97.9 0.0085 2.9E-07 51.9 28.9 205 131-340 48-331 (365)
292 3amr_A 3-phytase; beta-propell 97.9 0.01 3.5E-07 52.3 25.2 189 162-353 39-276 (355)
293 2xe4_A Oligopeptidase B; hydro 97.9 0.0034 1.2E-07 62.6 23.5 226 114-344 175-461 (751)
294 3tc9_A Hypothetical hydrolase; 97.8 0.017 5.7E-07 53.3 26.1 142 154-297 139-300 (430)
295 2xe4_A Oligopeptidase B; hydro 97.8 0.0011 3.9E-08 66.0 18.8 125 213-341 201-354 (751)
296 3ei3_A DNA damage-binding prot 97.8 0.054 1.8E-06 56.4 38.3 106 114-220 515-634 (1158)
297 2vpj_A Kelch-like protein 12; 97.7 0.016 5.4E-07 50.5 23.4 208 132-343 31-280 (301)
298 3m0c_C LDL receptor, low-densi 97.7 0.048 1.6E-06 54.3 31.3 182 165-348 397-595 (791)
299 2p9w_A MAL S 1 allergenic prot 97.7 0.019 6.5E-07 50.1 22.6 143 197-341 18-215 (334)
300 4a0p_A LRP6, LRP-6, low-densit 97.7 0.041 1.4E-06 53.4 32.0 221 124-348 8-244 (628)
301 3ii7_A Kelch-like protein 7; p 97.7 0.02 6.9E-07 50.0 22.7 217 124-344 14-275 (306)
302 2xn4_A Kelch-like protein 2; s 97.6 0.014 4.8E-07 50.9 21.1 214 124-343 18-278 (302)
303 3s94_A LRP-6, low-density lipo 97.6 0.032 1.1E-06 54.0 24.9 216 131-348 17-250 (619)
304 3ott_A Two-component system se 97.6 0.076 2.6E-06 52.9 29.0 220 112-343 21-262 (758)
305 3ii7_A Kelch-like protein 7; p 97.6 0.021 7.1E-07 49.9 21.7 169 171-343 23-227 (306)
306 2vpj_A Kelch-like protein 12; 97.6 0.023 7.8E-07 49.5 21.8 138 203-344 63-234 (301)
307 1n7d_A LDL receptor, low-densi 97.5 0.00098 3.4E-08 65.7 13.0 171 168-340 382-570 (699)
308 2xbg_A YCF48-like protein; pho 97.5 0.047 1.6E-06 48.2 32.4 259 112-415 35-320 (327)
309 4asc_A Kelch repeat and BTB do 97.4 0.061 2.1E-06 47.1 24.7 214 124-345 7-281 (315)
310 1zgk_A Kelch-like ECH-associat 97.4 0.03 1E-06 48.9 20.0 215 124-344 27-290 (308)
311 2xn4_A Kelch-like protein 2; s 97.4 0.061 2.1E-06 46.7 22.1 166 172-343 30-231 (302)
312 2uvk_A YJHT; unknown function, 97.2 0.084 2.9E-06 47.1 21.7 225 122-349 19-350 (357)
313 3kya_A Putative phosphatase; s 97.2 0.15 5E-06 47.6 26.9 227 115-346 141-480 (496)
314 4asc_A Kelch repeat and BTB do 97.2 0.1 3.5E-06 45.7 22.3 168 172-343 13-223 (315)
315 2xbg_A YCF48-like protein; pho 97.2 0.11 3.9E-06 45.7 27.7 218 112-338 79-319 (327)
316 2p1m_B Transport inhibitor res 97.0 0.00034 1.2E-08 67.7 3.8 36 22-57 4-40 (594)
317 1xi4_A Clathrin heavy chain; a 96.9 0.1 3.4E-06 54.5 20.3 206 131-341 47-331 (1630)
318 2be1_A Serine/threonine-protei 96.9 0.009 3.1E-07 52.7 11.2 137 205-343 12-185 (339)
319 1zgk_A Kelch-like ECH-associat 96.9 0.2 6.7E-06 43.6 21.3 166 172-343 39-242 (308)
320 2ism_A Putative oxidoreductase 96.8 0.26 8.7E-06 44.0 23.8 25 154-178 33-57 (352)
321 3s94_A LRP-6, low-density lipo 96.8 0.41 1.4E-05 46.3 37.4 109 113-221 84-201 (619)
322 2woz_A Kelch repeat and BTB do 96.8 0.24 8.2E-06 43.3 22.4 215 124-346 18-292 (318)
323 2p9w_A MAL S 1 allergenic prot 96.8 0.24 8.3E-06 43.2 23.1 185 155-341 16-265 (334)
324 3kya_A Putative phosphatase; s 96.8 0.35 1.2E-05 45.0 28.6 244 155-418 142-476 (496)
325 3ei3_A DNA damage-binding prot 96.7 0.7 2.4E-05 48.2 34.0 166 213-417 807-999 (1158)
326 3sre_A PON1, serum paraoxonase 96.6 0.36 1.2E-05 42.9 23.5 127 212-340 138-297 (355)
327 2uvk_A YJHT; unknown function, 96.5 0.39 1.3E-05 42.7 21.0 92 162-253 19-128 (357)
328 3pbp_A Nucleoporin NUP82; beta 96.5 0.31 1.1E-05 44.0 18.1 139 155-294 24-208 (452)
329 1bpo_A Protein (clathrin); cla 96.3 0.59 2E-05 42.4 35.2 230 122-356 35-304 (494)
330 3pbp_A Nucleoporin NUP82; beta 96.3 0.38 1.3E-05 43.4 17.7 133 202-337 31-208 (452)
331 4hfx_A Transcription elongatio 96.3 0.0036 1.2E-07 43.0 3.6 65 27-93 13-78 (97)
332 2woz_A Kelch repeat and BTB do 96.1 0.62 2.1E-05 40.6 22.2 168 172-343 24-233 (318)
333 3ogk_B Coronatine-insensitive 96.1 0.0023 7.7E-08 61.9 2.7 34 24-57 13-47 (592)
334 4a0p_A LRP6, LRP-6, low-densit 95.9 1.4 4.7E-05 42.7 42.6 148 113-261 80-235 (628)
335 3ott_A Two-component system se 95.7 1.9 6.5E-05 42.8 35.0 219 114-342 104-353 (758)
336 2ism_A Putative oxidoreductase 95.6 1.2 4E-05 39.6 25.1 218 104-328 22-332 (352)
337 2xzh_A Clathrin heavy chain 1; 95.4 1.2 4.3E-05 38.7 29.5 122 172-298 49-189 (365)
338 1xi4_A Clathrin heavy chain; a 94.3 4.7 0.00016 42.6 19.8 121 172-297 48-187 (1630)
339 2zwa_A Leucine carboxyl methyl 94.1 4.4 0.00015 39.7 19.3 184 161-345 396-639 (695)
340 1tl2_A L10, protein (tachylect 93.8 2.3 8E-05 34.7 13.6 93 196-294 45-159 (236)
341 1tl2_A L10, protein (tachylect 93.6 2.5 8.4E-05 34.5 14.5 134 153-292 42-204 (236)
342 3sbq_A Nitrous-oxide reductase 93.1 5.9 0.0002 37.3 21.0 97 255-353 299-430 (638)
343 3qhy_B Beta-lactamase inhibito 93.0 3.9 0.00013 34.9 19.1 189 212-417 41-246 (282)
344 3a9g_A Putative uncharacterize 92.3 5.6 0.00019 35.2 28.9 222 102-329 18-330 (354)
345 3kci_A Probable E3 ubiquitin-p 91.9 6.8 0.00023 35.2 26.5 232 157-416 56-344 (389)
346 2zwa_A Leucine carboxyl methyl 91.4 11 0.00039 36.8 21.2 140 203-343 398-579 (695)
347 3a9g_A Putative uncharacterize 91.2 7.6 0.00026 34.3 27.6 133 152-285 29-215 (354)
348 3qhy_B Beta-lactamase inhibito 89.7 8.7 0.0003 32.7 20.7 159 168-340 39-206 (282)
349 1cru_A Protein (soluble quinop 88.0 16 0.00055 33.5 16.5 19 268-286 144-162 (454)
350 4gq2_M Nucleoporin NUP120; bet 86.4 14 0.00048 37.7 14.7 39 268-306 236-274 (950)
351 3q6k_A 43.2 kDa salivary prote 85.4 20 0.00067 32.0 15.5 125 214-341 124-306 (381)
352 4gq2_M Nucleoporin NUP120; bet 82.4 20 0.00069 36.5 13.8 40 310-350 236-275 (950)
353 4fhn_B Nucleoporin NUP120; pro 81.6 54 0.0019 34.2 18.2 38 269-306 239-276 (1139)
354 3sbq_A Nitrous-oxide reductase 81.3 4.5 0.00016 38.0 7.7 104 236-340 325-477 (638)
355 3das_A Putative oxidoreductase 80.4 30 0.001 30.4 29.1 222 103-328 22-325 (347)
356 2g8s_A Glucose/sorbosone dehyd 80.1 30 0.001 30.3 27.6 228 104-334 9-347 (353)
357 3f7f_A Nucleoporin NUP120; nuc 79.7 3.3 0.00011 40.2 6.5 38 113-150 222-259 (729)
358 3s25_A Hypothetical 7-bladed b 74.5 40 0.0014 28.8 29.6 197 131-348 36-261 (302)
359 3das_A Putative oxidoreductase 74.4 45 0.0015 29.3 21.4 96 233-329 31-158 (347)
360 3s25_A Hypothetical 7-bladed b 73.6 42 0.0015 28.7 22.6 167 160-341 22-216 (302)
361 2g8s_A Glucose/sorbosone dehyd 73.1 48 0.0016 29.1 25.5 29 153-181 19-48 (353)
362 1zi0_A DNA gyrase subunit A; b 72.4 46 0.0016 28.6 26.1 173 124-297 5-225 (307)
363 4fhn_B Nucleoporin NUP120; pro 69.9 15 0.00051 38.4 9.0 39 311-350 239-277 (1139)
364 3sre_A PON1, serum paraoxonase 68.4 62 0.0021 28.5 28.7 213 107-324 44-327 (355)
365 3uc1_A DNA gyrase subunit A; D 67.5 62 0.0021 28.1 24.7 94 203-297 109-227 (327)
366 3zwu_A Alkaline phosphatase PH 62.3 28 0.00097 33.1 8.5 60 268-328 476-548 (592)
367 1suu_A DNA gyrase subunit A; t 62.3 75 0.0026 27.3 26.6 174 124-298 10-231 (312)
368 3f7f_A Nucleoporin NUP120; nuc 59.4 15 0.00051 35.7 6.0 32 319-350 228-259 (729)
369 1suu_A DNA gyrase subunit A; t 57.6 92 0.0031 26.7 21.8 177 161-340 6-230 (312)
370 4a9v_A PHOX; hydrolase, beta-p 54.8 63 0.0022 30.5 9.2 61 268-329 476-549 (592)
371 1wp5_A Topoisomerase IV; broke 50.0 1.3E+02 0.0043 26.0 26.1 174 124-298 7-225 (323)
372 3no0_A DNA gyrase subunit A; D 45.8 1.3E+02 0.0045 25.1 17.5 110 112-221 67-195 (276)
373 2wg3_C Hedgehog-interacting pr 45.4 1.8E+02 0.0062 26.6 14.1 95 235-330 15-158 (463)
374 1cru_A Protein (soluble quinop 43.4 1.9E+02 0.0065 26.3 28.8 107 102-208 16-160 (454)
375 3l6v_A GYRA, DNA gyrase subuni 43.3 1.7E+02 0.006 25.8 27.2 173 124-297 9-264 (370)
376 4d9s_A UVB-resistance protein 42.5 1.8E+02 0.0063 25.8 35.6 221 112-340 15-304 (406)
377 3uc1_A DNA gyrase subunit A; D 38.6 1.9E+02 0.0066 24.9 23.6 135 162-297 108-278 (327)
378 2wg3_C Hedgehog-interacting pr 37.0 2.5E+02 0.0084 25.7 14.6 53 268-321 14-79 (463)
379 3no0_A DNA gyrase subunit A; D 35.4 2E+02 0.0067 24.1 23.5 94 203-297 80-195 (276)
380 3kci_A Probable E3 ubiquitin-p 32.5 2.6E+02 0.0088 24.6 28.1 219 115-340 55-344 (389)
381 3mvd_K Regulator of chromosome 31.2 2.8E+02 0.0097 24.6 28.3 218 114-340 76-373 (423)
382 3hx6_A Type 4 fimbrial biogene 30.1 3.6E+02 0.012 25.5 11.2 172 163-344 85-287 (570)
383 4a9v_A PHOX; hydrolase, beta-p 29.7 1.6E+02 0.0054 27.9 7.6 52 235-286 477-549 (592)
384 4d9s_A UVB-resistance protein 28.2 3.1E+02 0.011 24.2 29.6 219 114-340 69-356 (406)
385 2lh0_A Histone chaperone RTT10 27.6 49 0.0017 21.0 2.6 33 21-53 5-40 (70)
386 1sr4_A CDT A, cytolethal diste 24.7 91 0.0031 24.8 4.3 95 252-350 67-168 (206)
387 1q47_A Semaphorin 3A; beta pro 23.0 2.8E+02 0.0096 25.6 8.1 67 269-336 405-487 (495)
388 3mvd_K Regulator of chromosome 22.5 4.1E+02 0.014 23.6 32.4 175 157-339 78-320 (423)
389 1zvt_A Topoisomerase IV subuni 22.3 3.3E+02 0.011 22.4 14.7 133 206-341 5-163 (256)
390 1ukf_A Avirulence protein AVRP 21.8 1.4E+02 0.0049 23.2 4.8 34 112-145 118-154 (188)
No 1
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.3e-50 Score=380.14 Aligned_cols=386 Identities=16% Similarity=0.214 Sum_probs=313.6
Q ss_pred CccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCCCC------------CCCChHHHHHH
Q 014590 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNT------------SGSSMRLHLEE 88 (422)
Q Consensus 21 ~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~------------~~~~~~~~~~~ 88 (422)
.|++..||.|++.+||+||++++|.++++|||+|+.++.++.+|+.+|.+.+....+ ...+|+..+..
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 389999999999999999999999999999999999999999999999766532211 22344533222
Q ss_pred HHHhhhhhhccccce-eeEEeeccccce-eEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCe
Q 014590 89 LAMKHHRFALEEGRI-DIDQWKAHSVGV-DQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESK 165 (422)
Q Consensus 89 ~~~~~~~~~~~~~~~-~~~~l~~H~~~v-~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 165 (422)
.. +...+|..+.. ....+.+|.+.| .++.+.+++|++|+.||+|++||+.+++.+..+.+|... ..++++ ++.
T Consensus 96 ~~--~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~ 171 (445)
T 2ovr_B 96 QH--RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNI 171 (445)
T ss_dssp HH--HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTE
T ss_pred hh--hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCE
Confidence 21 22345555443 567899999975 666777669999999999999999999999999877543 346665 667
Q ss_pred EE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC
Q 014590 166 IV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED 244 (422)
Q Consensus 166 l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 244 (422)
++ ++.|+.|++||+.+++.+.. ..++...+.++.+.++.+++|+.||.|++||+.+++.+..+.+|...|.++++ .+
T Consensus 172 l~s~~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~ 249 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DG 249 (445)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE-ECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CS
T ss_pred EEEEeCCCeEEEEECCcCcEEEE-ECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CC
Confidence 77 99999999999998875422 22333345677778888999999999999999999999999999999999999 56
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
+.+++|+.||.|++||+++++.+ ..|.+++| ++.++++|+.||.|++||+++++.+..+.+|...+.++.
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~- 326 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME- 326 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-
Confidence 78999999999999999887765 77888888 889999999999999999999999999999999898887
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCceEEEeee---cCCcc--------cccCCCCCCeEEeeeccccCCCcccccC---
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM---DIGSA--------SSSSNKVSGVIERNEGRRLSAGCCIDRI--- 383 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~---~~~~~--------~~~~~s~d~~i~~~~~~~~~~~~~~~~~--- 383 (422)
+ +++++++|+.||.|++||+.+++.+..+.. |...+ .+++++.||.+.+|+.... ..+..+
T Consensus 327 ~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~ 401 (445)
T 2ovr_B 327 L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG---EFIRNLVTL 401 (445)
T ss_dssp E--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTC---CEEEEEEEC
T ss_pred E--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCC---ceeeeeecc
Confidence 4 577999999999999999999999988876 44433 5778889999988765432 222222
Q ss_pred -CCCCCCCeEEEEe--cCEEEEEEeCCCe----EEEEEccCCCC
Q 014590 384 -PKTIRPPITCLAV--GMKKVVTTHNSKY----IRLWKFNYSDK 420 (422)
Q Consensus 384 -~~~h~~~v~~i~~--~~~~l~s~s~Dg~----i~iW~~~~~~~ 420 (422)
..+|.+.|++++| ++.++++|+.||+ |.+||++...|
T Consensus 402 ~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~~ 445 (445)
T 2ovr_B 402 ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 445 (445)
T ss_dssp TTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC-
T ss_pred ccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCCCC
Confidence 2467889999999 5789999999998 99999987643
No 2
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-48 Score=371.94 Aligned_cols=385 Identities=18% Similarity=0.168 Sum_probs=297.6
Q ss_pred ccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccC-ChhHHHHHHhhcCCCCCC-------------CCChH-HHH
Q 014590 22 ATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINR-CKLLQLLYCKLHGFSNTS-------------GSSMR-LHL 86 (422)
Q Consensus 22 ~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~-~~~w~~~~~~~~~~~~~~-------------~~~~~-~~~ 86 (422)
|++..||.|++++||+||++++|.++++|||.|+.++.+ +.+|+.+|.++....... ..... .|.
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDRLR 92 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchhhH
Confidence 899999999999999999999999999999999999998 889999997765433221 01111 111
Q ss_pred HH-HHHhhhhhhccccc--eeeEEeeccccce-eEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEec
Q 014590 87 EE-LAMKHHRFALEEGR--IDIDQWKAHSVGV-DQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDF 161 (422)
Q Consensus 87 ~~-~~~~~~~~~~~~~~--~~~~~l~~H~~~v-~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 161 (422)
.. ........+|..+. .....+.+|.+.| .++.+++++|++|+.||+|++||+.+++.+..+.+|.. +..++|++
T Consensus 93 ~~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~ 172 (464)
T 3v7d_B 93 LSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 172 (464)
T ss_dssp HHHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred HHHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC
Confidence 11 01111223444433 3567899999885 67777777999999999999999999999999987654 55699999
Q ss_pred CCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEee--eCCeEEEecCCCeEEEEeCCCcce-----------
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKC----------- 225 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~----------- 225 (422)
++ .++ ++.|++|++||+.+++.+ +..+.+. +..+++.+ .++.+++|+.|+.|++||+++++.
T Consensus 173 ~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 173 GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNST-VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCc-cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 88 555 999999999999988754 3333333 34555554 345699999999999999987652
Q ss_pred ------------eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEe
Q 014590 226 ------------SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 226 ------------~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~ 286 (422)
+..+.+|...|.++.. .++++++|+.||.|++||+++++.+ ..|.+++|+|+++++++|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eEeeccCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe
Confidence 4567788899988854 3479999999999999999988766 7899999999999999999
Q ss_pred CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCC---------cccc
Q 014590 287 TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIG---------SASS 357 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------~~~~ 357 (422)
.||.|++||+++++++.++.+|...|.++. ++ +++|++++.||.|++||+.+++....+..... ...+
T Consensus 330 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~-~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTLQGHTALVGLLR-LS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNIL 406 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEE-EC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEE
T ss_pred CCCcEEEEECCCCcEEEEEeCCCCcEEEEE-Ec--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEE
Confidence 999999999999999999999999999998 65 68999999999999999998876655532211 1144
Q ss_pred cCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecC-EEEEEEeCCCeEEEEEcc
Q 014590 358 SSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGM-KKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 358 ~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~-~~l~s~s~Dg~i~iW~~~ 416 (422)
++++ |+.+.+|+. ..+..+......|...|.+++|++ .++++++.||.+.+|-++
T Consensus 407 ~~~~-dg~i~iwd~---~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 407 VSGS-ENQFNIYNL---RSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEE-TTEEEEEET---TTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEec-CCeEEEEEC---CCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEee
Confidence 4555 777776544 444555555677899999999965 555566677776665443
No 3
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7e-50 Score=376.68 Aligned_cols=354 Identities=21% Similarity=0.294 Sum_probs=284.3
Q ss_pred ccccccCHH----HHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCC------------------CC-C-
Q 014590 22 ATIESLNGD----IICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGF------------------SN-T- 77 (422)
Q Consensus 22 ~~~~~Lp~e----~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~------------------~~-~- 77 (422)
|++..||.| |+++||+|||+++|.++++|||+|+.++.++.+||.+|.+.+.. .. +
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 88 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPP 88 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC-----
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCC
Confidence 999999999 99999999999999999999999999999999999999876421 00 1
Q ss_pred -CCCChHHHHHHHHH------hhhhhhccccceeeEEee---ccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEe
Q 014590 78 -SGSSMRLHLEELAM------KHHRFALEEGRIDIDQWK---AHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEE 147 (422)
Q Consensus 78 -~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~---~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 147 (422)
...+...+.+.... .....+|..+......+. +|...|.++.+.+.++++|+.||.|++||+.+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~ 168 (435)
T 1p22_A 89 DGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRI 168 (435)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEE
T ss_pred CCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEE
Confidence 00111122221111 123456777665555554 56678999999666999999999999999999999999
Q ss_pred eeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee
Q 014590 148 YSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS 226 (422)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 226 (422)
+.+|.. .+.++.++++.++ ++.||.|++||+.+++.+.. ..++...+.++.+.+..+++|+.||.|++||+.+++..
T Consensus 169 ~~~h~~-~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 169 LTGHTG-SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT-LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp ECCCSS-CEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE-ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC
T ss_pred EcCCCC-cEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEE-EcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc
Confidence 987654 3344555888888 89999999999998875422 22333446677777788999999999999999988765
Q ss_pred ---eeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 227 ---QIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 227 ---~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
..+.+|...|.++++ .++++++|+.||.|++||+++++.+ ..|.++++ +++++++|+.||.|++||+
T Consensus 247 ~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred eeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 677889999999999 5589999999999999999998776 77888888 5789999999999999999
Q ss_pred CCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc---------eEEEeeecCCcccccCCCCCCeEE
Q 014590 297 RTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE---------VLSRCVMDIGSASSSSNKVSGVIE 367 (422)
Q Consensus 297 ~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~---------~~~~~~~~~~~~~~~~~s~d~~i~ 367 (422)
++++++.++.+|...|.+++ + ++++|++|+.||.|++||+.+++ ++..+
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~-~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~------------------- 381 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIR-F--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL------------------- 381 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEE-C--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-------------------
T ss_pred CCCCEEEEEeCCcCcEEEEE-e--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec-------------------
Confidence 99999999999999999998 5 78999999999999999997655 34443
Q ss_pred eeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccCCC
Q 014590 368 RNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.+|.+.|++++|++.+|++|+.||+|++||+..++
T Consensus 382 -----------------~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 382 -----------------VEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp -----------------CCCSSCCCCEEECSSCEEECCSSSEEEEEC-----
T ss_pred -----------------cCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCC
Confidence 34667999999999999999999999999997654
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-44 Score=338.21 Aligned_cols=282 Identities=14% Similarity=0.197 Sum_probs=248.2
Q ss_pred hccccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCC
Q 014590 97 ALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 97 ~~~~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~ 172 (422)
.|.........+.||.++|++++| +++ +|++|+.||+|++||+.+++....+.+|.. +..++|+|++..|+ ++.|+
T Consensus 93 ~~~~~~~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 93 EWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp CCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccCCCceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC
Confidence 344444456789999999999999 555 999999999999999999999999988754 56699999999998 99999
Q ss_pred eEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 173 RICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 173 ~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
+|++||+.+.+.+ +..+.+ .+..+++.+.+..+++|+.|++|++||+++++++..+.+|...|.++.++|+ .++++
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~-~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDH-NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEeCCCCceeEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 9999999887654 333333 3456677777888999999999999999999999999999999999999987 89999
Q ss_pred EcCCCcEEEEeCCCCccc-------cceEeEEEecC--------------------CCEEEEEeCCCeEEEEECCCCeee
Q 014590 250 GSSLGSIAISGLSSDQRL-------TGIKTLCYNPC--------------------SRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~--------------------~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
|+.|++|++||+.+++.. ..|.+++|+|+ |.++++|+.|+.|++||+++++++
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999999999999988765 78999999996 679999999999999999999999
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
..+.+|...|.+++ |+|++++|++|+.||.|++||+.+++++..+..
T Consensus 332 ~~~~~h~~~v~~v~-~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-------------------------------- 378 (410)
T 1vyh_C 332 MTLVGHDNWVRGVL-FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-------------------------------- 378 (410)
T ss_dssp EEEECCSSCEEEEE-ECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC--------------------------------
T ss_pred EEEECCCCcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC--------------------------------
Confidence 99999999999999 999999999999999999999999988888755
Q ss_pred CCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 383 IPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 383 ~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
|...|++++| ++.+|+||+.||+|++|++.
T Consensus 379 ----h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 379 ----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ----CSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred ----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 4558999999 57899999999999999863
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.2e-43 Score=321.30 Aligned_cols=273 Identities=17% Similarity=0.230 Sum_probs=236.3
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...++|.||.+.|.+++| +++ +|++|+.||+|++||..+++.+..+..+.. +..++|+|+++.++ ++.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 456789999999999999 566 999999999999999999999998887654 55699999999999 89999999999
Q ss_pred CCCCce---e---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 179 RNGLRS---V---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 179 ~~~~~~---~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
+.+... . +..+.+.+ ..+.+.. +..+++++.|++|++||+++++.+..+.+|.+.|.+++|+|+ .++++|+
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v-~~~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYL-SCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCE-EEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CccCCCcceeEEEecCCCccE-EEEEECC-CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 987531 2 33333332 2333333 345999999999999999999999999999999999999987 7999999
Q ss_pred CCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc--CCCceeeeeeEecCC
Q 014590 252 SLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI--SPNVVYSLQHLQNDT 322 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~s~~~ 322 (422)
.|+.|++||++++... ..|.+++|+|++++|++|+.||.|++||+++++.+..+.. +...|++++ |+|++
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~-~s~~g 282 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS-FSKSG 282 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE-ECCCC
Confidence 9999999999988765 7899999999999999999999999999999888776653 335799999 99999
Q ss_pred CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEE
Q 014590 323 STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKK 400 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~ 400 (422)
++|++|+.||.|++||+.+++.+..+.+ |...|++++| ++.+
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~------------------------------------h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAG------------------------------------HDNRVSCLGVTDDGMA 326 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC------------------------------------CSSCEEEEEECTTSSC
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeec------------------------------------CCCcEEEEEEcCCCCE
Confidence 9999999999999999999988887755 4568999999 6889
Q ss_pred EEEEeCCCeEEEEE
Q 014590 401 VVTTHNSKYIRLWK 414 (422)
Q Consensus 401 l~s~s~Dg~i~iW~ 414 (422)
|+||+.||+|++||
T Consensus 327 l~s~s~D~~i~iWd 340 (340)
T 1got_B 327 VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCccEEecC
Confidence 99999999999996
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=318.74 Aligned_cols=277 Identities=16% Similarity=0.203 Sum_probs=243.9
Q ss_pred ceeeEEeeccccceeEEEec-----CC-eEEEEecCCeEEEEEcCCCeE--EEeeeCCC-ceeeEEEecCCCeEE-EecC
Q 014590 102 RIDIDQWKAHSVGVDQCRMK-----RG-LILTGVGDKVMRLWSLEGYKC--VEEYSLPN-AASLVDFDFDESKIV-GLIG 171 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~-----~~-~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~l~-~~~~ 171 (422)
+...+.+++|.+.|++++|. ++ +|+||+.|++|+|||+.+++. ...+.+|. .+..+++++++..++ ++.|
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 34567788999999999993 23 899999999999999987754 34566664 456699999999998 8999
Q ss_pred CeEEEEECCCCceee--ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE
Q 014590 172 TRICIWRRNGLRSVF--PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII 248 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~ 248 (422)
++|++||+.+++.+. ..+. .....+++.+++..+++|+.|+.|++||+++++....+..|...|.+++|+|+ ++++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGP-VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCT-TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CcEEEEECCCCCEEEEEeCCC-ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE
Confidence 999999999887543 2222 23446788888889999999999999999999999999999999999999987 8999
Q ss_pred EEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC
Q 014590 249 SGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
+|+.||.|++||+++++.+ ..|.+++|+|++++|++|+.|+.|++||+++++...++.+|...|.+++ |+|+
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~-~sp~ 259 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA-FCPD 259 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE-ECTT
T ss_pred EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE-ECCC
Confidence 9999999999999998766 6899999999999999999999999999999999999999999999999 9999
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCE
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMK 399 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~ 399 (422)
+++|++++.|+.|++||+.+++++.++.. |...|.+++| ++.
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~------------------------------------h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFD------------------------------------HQDQVWGVKYNGNGS 303 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECC------------------------------------CSSCEEEEEECTTSS
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEcC------------------------------------CCCcEEEEEECCCCC
Confidence 99999999999999999999999888855 4558999999 688
Q ss_pred EEEEEeCCCeEEEEEcc
Q 014590 400 KVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 400 ~l~s~s~Dg~i~iW~~~ 416 (422)
+|++++.||+|++||.+
T Consensus 304 ~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 304 KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEETTCCEEEEECC
T ss_pred EEEEEeCCCeEEEEeCC
Confidence 99999999999999974
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-43 Score=326.73 Aligned_cols=286 Identities=19% Similarity=0.229 Sum_probs=240.2
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
....++|.||.+.|++++| +++ +|+||+.||+|+|||+.+++....+..|.. +..++|+|+++.++ ++.|+.+++|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 4567889999999999999 566 999999999999999999999999988755 45599999999999 8899999999
Q ss_pred ECCCCc---------eeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeee-----ecCCccEEEEEec
Q 014590 178 RRNGLR---------SVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQII-----RMHCAPVTSLSLS 242 (422)
Q Consensus 178 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~l~~~ 242 (422)
++.+.. ..+..+.+.+. .+.+.+.+ ..+++|+.|++|++||+++++.+..+ .+|...|.+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred ECCCCccccCCccceeeccCCCcceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 987532 12333433322 23333333 34999999999999999999988777 6789999999998
Q ss_pred C-C-CEEEEEcCCCcEEEEeCCCC-ccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC---
Q 014590 243 E-D-QLIISGSSLGSIAISGLSSD-QRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP--- 309 (422)
Q Consensus 243 ~-~-~~l~s~~~dg~i~iwd~~~~-~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--- 309 (422)
+ + +++++|+.|++|++||++.. ..+ ..|.+++|+|++++|++|+.||+|++||+++++.+..+..+.
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 5 4 89999999999999999843 333 789999999999999999999999999999998887776543
Q ss_pred ----CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCC
Q 014590 310 ----NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPK 385 (422)
Q Consensus 310 ----~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~ 385 (422)
..|++++ |+|+|++|++|+.||.|++||+.+++.+..+.. ...
T Consensus 295 ~~~~~~v~~~~-~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~--------------------------------~~~ 341 (380)
T 3iz6_a 295 DNELPIVTSVA-FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT--------------------------------LQN 341 (380)
T ss_dssp CCSSCSCSEEE-ECSSSSEEEEECTTSCEEEEETTTCCEEEEECC--------------------------------SCS
T ss_pred ccccCceEEEE-ECCCCCEEEEEECCCCEEEEECCCCceEEEEec--------------------------------ccC
Confidence 2488999 999999999999999999999998888776632 124
Q ss_pred CCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCCC
Q 014590 386 TIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDKY 421 (422)
Q Consensus 386 ~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~~ 421 (422)
+|.+.|++++| ++.+|+|||.||+|++|++....+.
T Consensus 342 ~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRKI 379 (380)
T ss_dssp SCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSSC
T ss_pred CCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCccc
Confidence 68889999999 6899999999999999999887664
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-42 Score=308.06 Aligned_cols=277 Identities=16% Similarity=0.190 Sum_probs=238.3
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...++|.+|.+.|.+++| |++ +|++|+.||+|++||+.+++.+..+..+.. +..++|+++++.++ ++.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 356789999999999999 566 999999999999999999999999987654 56699999999998 99999999999
Q ss_pred CCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecC-C-CEEEEEcCC
Q 014590 179 RNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSE-D-QLIISGSSL 253 (422)
Q Consensus 179 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d 253 (422)
+.+++.+ +..+.+. +..+++.+.++.+++|+.|++|++||++++ .....+.+|...|.+++|+| + ..+++|+.|
T Consensus 84 ~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp TTTCCEEEEEECCSSC-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CCCCcEEEEEeCCCCc-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 9988754 4444443 456778888888999999999999999887 45677889999999999998 4 799999999
Q ss_pred CcEEEEeCCCCccc--------cceEeEEEec--CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 254 GSIAISGLSSDQRL--------TGIKTLCYNP--CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 254 g~i~iwd~~~~~~~--------~~v~~~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
++|++||++++... ..+..++|+| ++.+|++|+.|+.|++||+++++++.++.+|...|.+++ |+|+++
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~-~~p~~~ 241 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLP 241 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSS
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE-ECCCCC
Confidence 99999999876654 5688888886 778999999999999999999999999999999999999 999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cC-E-
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GM-K- 399 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~-~- 399 (422)
+|++|+.||+|++||+.+++.+..+..+ ...+.+++| ++ .
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVG------------------------------------LERSWCIATHPTGRKN 285 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCS------------------------------------SSSEEEEEECTTCGGG
T ss_pred EEEEEcCCCeEEEEECCCCceeeeccCC------------------------------------CccEEEEEECCCCCce
Confidence 9999999999999999999999888554 347899997 33 2
Q ss_pred EEEEEeCCCeEEEEEccCC
Q 014590 400 KVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 400 ~l~s~s~Dg~i~iW~~~~~ 418 (422)
++++|+.|| +.+|++...
T Consensus 286 ~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 286 YIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp CEEEEETTE-EEEEECC--
T ss_pred EEEEecCCc-eEEEEeccC
Confidence 577777665 668887653
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.8e-42 Score=313.40 Aligned_cols=274 Identities=16% Similarity=0.167 Sum_probs=238.2
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...++|+||.+.|.+++| +++ +|+||+.||+|++||..+++....+..+.. +..++|+|++..++ ++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 456789999999999999 566 999999999999999999988888877644 56699999999999 89999999999
Q ss_pred CCCCc--------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC---CEE
Q 014590 179 RNGLR--------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLI 247 (422)
Q Consensus 179 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~l 247 (422)
+.... ..+..+.+. +..+++.+.+..+++++.|++|++||+++++.+..+.+|...|.+++++|+ +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNY-LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCc-EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 86432 123334333 346667777778999999999999999999999999999999999999863 699
Q ss_pred EEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC--CCceeeeeeE
Q 014590 248 ISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS--PNVVYSLQHL 318 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~ 318 (422)
++|+.||.|++||+++++.+ ..|.+++|+|++.++++|+.|++|++||+++++.+..+..+ ...+.+++ |
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~-~ 292 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD-F 292 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-E
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE-E
Confidence 99999999999999998876 78999999999999999999999999999988877666543 35788998 9
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-- 396 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-- 396 (422)
+|++++|++|+.|+.|++||+.+++.+..+.+ |...|++++|
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~------------------------------------h~~~v~~l~~sp 336 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFG------------------------------------HENRVSTLRVSP 336 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECC------------------------------------CSSCEEEEEECT
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEEC------------------------------------CCCcEEEEEECC
Confidence 99999999999999999999999988877744 5568999999
Q ss_pred cCEEEEEEeCCCeEEEEE
Q 014590 397 GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 397 ~~~~l~s~s~Dg~i~iW~ 414 (422)
++++|+||+.||+|++|+
T Consensus 337 dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 337 DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSCEEEEETTSEEEEEC
T ss_pred CCCEEEEEcCCCCEEecC
Confidence 689999999999999996
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-42 Score=317.83 Aligned_cols=276 Identities=15% Similarity=0.160 Sum_probs=223.7
Q ss_pred EeeccccceeEEEe-cCC-eEEEEec------CCeEEEEEcCCCeEEEe-----eeCCCceeeEEEecCCCeEEEecCCe
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVG------DKVMRLWSLEGYKCVEE-----YSLPNAASLVDFDFDESKIVGLIGTR 173 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~------dg~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~ 173 (422)
...+|...|.+++| ||| +|++|+. |+.|++|+..++..... ..+...+..++|+|++..++++.||+
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~ 116 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGA 116 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSC
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCE
Confidence 34579999999999 678 9999997 78899999887654322 33445677899999998888999999
Q ss_pred EEEEECCCCceee----e-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CE
Q 014590 174 ICIWRRNGLRSVF----P-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QL 246 (422)
Q Consensus 174 i~~w~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~ 246 (422)
|++||+.+++... . ......+..+++.+++..|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+ .+
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 9999998776331 1 112233456777778888999999999999999999999999999999999999975 58
Q ss_pred EEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee
Q 014590 247 IISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
+++++.|+.|++||+++++.. ..+.+++|+|++ .++++|+.|+.|++||+++++++.++.+|...|++++
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEE
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEE
Confidence 999999999999999988765 678999999974 6899999999999999999999999999999999999
Q ss_pred eEecCC-CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 317 HLQNDT-STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 317 ~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
|+|++ ++|++|+.||+|+|||+++++++..+ +|...|++++
T Consensus 277 -~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-------------------------------------~H~~~V~~va 318 (357)
T 4g56_B 277 -YSYHSSPFLASISEDCTVAVLDADFSEVFRDL-------------------------------------SHRDFVTGVA 318 (357)
T ss_dssp -ECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-------------------------------------CCSSCEEEEE
T ss_pred -EcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-------------------------------------CCCCCEEEEE
Confidence 99987 57999999999999999988776543 3667999999
Q ss_pred e---cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 396 V---GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 396 ~---~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
| ++.+|+|||.||+|++|+++...+
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 9 478999999999999999976543
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=313.60 Aligned_cols=270 Identities=16% Similarity=0.160 Sum_probs=220.7
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC------------CeEEEeeeCCCceeeEEEecCCCeEEEecCCeE
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG------------YKCVEEYSLPNAASLVDFDFDESKIVGLIGTRI 174 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 174 (422)
..|...|.+++| +|| +|++++ |+++++||... +.....+.....+..++|++++..++++.||+|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v 105 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAV 105 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEE
Confidence 457788999999 677 666666 78888887321 111222333445777999999766669999999
Q ss_pred EEEECCCCceee------ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CE
Q 014590 175 CIWRRNGLRSVF------PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QL 246 (422)
Q Consensus 175 ~~w~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~ 246 (422)
++||+++++... ..|.+ .+..+++++++..|++|+.|++|++||+++++++..+.+|.+.|.+++|+|+ .+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~-~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDD-IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCC-CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999999876431 23333 3456777788888999999999999999999999999999999999999975 58
Q ss_pred EEEEcCCCcEEEEeCCCCccc---------cceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee
Q 014590 247 IISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
+++++.|++|++||+++++.. ..+.+++|+|+ ++++++|+.||.|++||+++++++.++.+|...|++++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 999999999999999988765 56899999985 57889999999999999999999999999999999999
Q ss_pred eEecCC-CEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 317 HLQNDT-STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 317 ~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
|+|++ ++|++|+.|++|+|||+.+++++. + .+|...|++++
T Consensus 265 -fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~------------------------------------~~H~~~V~~v~ 306 (344)
T 4gqb_B 265 -FSPHSVPFLASLSEDCSLAVLDSSLSELFR-S------------------------------------QAHRDFVRDAT 306 (344)
T ss_dssp -ECSSSSCCEEEEETTSCEEEECTTCCEEEE-E------------------------------------CCCSSCEEEEE
T ss_pred -EccCCCeEEEEEeCCCeEEEEECCCCcEEE-E------------------------------------cCCCCCEEEEE
Confidence 99998 579999999999999999876542 3 34677999999
Q ss_pred e--cC-EEEEEEeCCCeEEEEEccCC
Q 014590 396 V--GM-KKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 396 ~--~~-~~l~s~s~Dg~i~iW~~~~~ 418 (422)
| ++ .+|+|||.||+|++|+++.+
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9 44 57889999999999999764
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-40 Score=298.78 Aligned_cols=281 Identities=20% Similarity=0.277 Sum_probs=243.0
Q ss_pred cccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeE
Q 014590 99 EEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRI 174 (422)
Q Consensus 99 ~~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i 174 (422)
........++.+|.+.|.+++| +++ +|++|+.||.|++|+..+++....+..|.. +..++|+|+++.|+ ++.|+.|
T Consensus 10 ~~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 10 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 3445677889999999999999 566 999999999999999999999988887654 55699999999998 8999999
Q ss_pred EEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 175 CIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 175 ~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
++||+.+++.+ +..+.+ .+..+++.+.++.+++|+.|+.|++||+++++.+..+..|..+|.+++|+|+ +++++++
T Consensus 90 ~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp EEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 99999988754 344433 3456677777888999999999999999999999999999999999999987 8999999
Q ss_pred CCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeee--eeEecC
Q 014590 252 SLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSL--QHLQND 321 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l--~~~s~~ 321 (422)
.||.|++||+++++.+ ..+..++|+|+++++++++.||.|++||+++++.+..+.+|...+.++ .+..++
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 9999999999988765 578999999999999999999999999999999999998887654443 224467
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCE
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMK 399 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~ 399 (422)
+.+|++|+.||.|++||+.+++.+..+.+ |...|.+++| +++
T Consensus 249 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~------------------------------------h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 249 GKWIVSGSEDNLVYIWNLQTKEIVQKLQG------------------------------------HTDVVISTACHPTEN 292 (312)
T ss_dssp SCEEEECCTTSCEEEEETTTCCEEEEECC------------------------------------CSSCEEEEEECSSSS
T ss_pred CcEEEEECCCCEEEEEECCCchhhhhhhc------------------------------------cCCcEEEEeecCcCC
Confidence 88999999999999999999998888755 4558999999 578
Q ss_pred EEEEEe--CCCeEEEEEcc
Q 014590 400 KVVTTH--NSKYIRLWKFN 416 (422)
Q Consensus 400 ~l~s~s--~Dg~i~iW~~~ 416 (422)
+|++++ .|++|++|+.+
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 999987 69999999975
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.7e-41 Score=328.04 Aligned_cols=242 Identities=16% Similarity=0.203 Sum_probs=201.9
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC--eEEEeeeCCC-ceeeEEEecCCCeEE-EecC----
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPN-AASLVDFDFDESKIV-GLIG---- 171 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~---- 171 (422)
+.....|.+|.+.|++++| |+| +||||+.||+|+|||+.++ .....+..|. .+..++|+|+++.|+ ++.+
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 4567789999999999999 677 9999999999999999754 3455666554 456699999999998 4443
Q ss_pred CeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
+.|++||.......+..+.+. +..+++.++++. +++|+.|++|++||..+++....+.+|...|.+++|+|+ +++++
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~-v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARA-MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSC-EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEeeCCCCcceecCCCCC-ceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 478888865444445554443 346667777664 999999999999999999999999999999999999987 89999
Q ss_pred EcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee------------
Q 014590 250 GSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW------------ 303 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~------------ 303 (422)
|+.|++|++||+.+++.. ..|.+++|+|+|++|++++.|++|++||+.+++.+.
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 999999999998876532 679999999999999999999999999998876543
Q ss_pred -------------------------------eeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 304 -------------------------------ETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 304 -------------------------------~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
.+.+|...|++++ |+|++++|++++.|+.|++||+.+++..
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~-~spdg~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS-SSADGKTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE-EeCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 3357889999999 9999999999999999999999876543
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.3e-40 Score=298.55 Aligned_cols=283 Identities=17% Similarity=0.231 Sum_probs=237.0
Q ss_pred eeeEEeeccccceeEEEec-CC--eEEEEecCCeEEEEEcCC-----CeEEEeeeCCCc-eeeEEEecCCCeEE-EecCC
Q 014590 103 IDIDQWKAHSVGVDQCRMK-RG--LILTGVGDKVMRLWSLEG-----YKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~-~~--~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~ 172 (422)
.+..+|+||.+.|.+++|+ ++ +|+||+.|++|++|++.+ +..+..+.+|.. +..++|+|++.+++ ++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4567899999999999994 33 999999999999999864 345677887754 45699999999998 89999
Q ss_pred eEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC------
Q 014590 173 RICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED------ 244 (422)
Q Consensus 173 ~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~------ 244 (422)
+|++||+.+++.+ +..+.+. +..+++.+.+..+++|+.|++|++||++ ++++..+.+|...|.++.+.|.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSD-VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSC-EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 9999999988754 4445444 3456666777789999999999999995 6678888899999999999874
Q ss_pred -CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee
Q 014590 245 -QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ 316 (422)
Q Consensus 245 -~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~ 316 (422)
..+++++.|+.|++||+++++.. ..|.+++|+|+|++|++|+.||.|++||+.+++.+.++..+ ..|.+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 244 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLA 244 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEE
Confidence 37999999999999999887654 78999999999999999999999999999999999888765 6799999
Q ss_pred eEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe
Q 014590 317 HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV 396 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~ 396 (422)
|+|++.+|++++.++ +++|++..+..+..+..+.. .....|...+.+++|
T Consensus 245 -~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 245 -FSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFA----------------------------GYSKAAEPHAVSLAW 294 (319)
T ss_dssp -ECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCT----------------------------TCCGGGCCCEEEEEE
T ss_pred -EcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCcccc----------------------------ccccCcCcceeEEEE
Confidence 999999999887654 99999988777666644221 112345678999999
Q ss_pred --cCEEEEEEeCCCeEEEEEccCC
Q 014590 397 --GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 397 --~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
|+++|++|+.||.|++|++.+.
T Consensus 295 spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 295 SADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCCEEEEeecCceEEEEEEeec
Confidence 7999999999999999999764
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.8e-40 Score=324.01 Aligned_cols=310 Identities=14% Similarity=0.124 Sum_probs=249.6
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee-------CC-CceeeEEEecCCCeEE-Eec
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS-------LP-NAASLVDFDFDESKIV-GLI 170 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~l~-~~~ 170 (422)
...+.++.+|.+.|.+++| +++ +|++|+.|++|++||+.+++.+..+. +| ..+..++|+|++..|+ ++.
T Consensus 180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 3567789999999999999 567 99999999999999999999988884 34 4456699999999999 899
Q ss_pred CCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE
Q 014590 171 GTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI 247 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l 247 (422)
|++|++||+.+++.+ +............+.+.+..+++++.|+.+++||..+++....+.+|...|.+++|+|+ +++
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 999999999987754 22222222234455556777999999999999999999888889999999999999987 899
Q ss_pred EEEcCCCcEEEEeCCCCccc------------------------------------------------------------
Q 014590 248 ISGSSLGSIAISGLSSDQRL------------------------------------------------------------ 267 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~~~~~------------------------------------------------------------ 267 (422)
++++.|++|++||+.+++..
T Consensus 340 ~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (611)
T 1nr0_A 340 FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 419 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEE
Confidence 99999999999998764321
Q ss_pred -----------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee--eeeeccCCCceeeee
Q 014590 268 -----------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS--LWETRISPNVVYSLQ 316 (422)
Q Consensus 268 -----------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~ 316 (422)
..+.+++|+|+|++|++|+.|+.|++||+.++.. +.. .+|...|++++
T Consensus 420 s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~ 498 (611)
T 1nr0_A 420 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVA 498 (611)
T ss_dssp CTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEE
T ss_pred eCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEE
Confidence 1256789999999999999999999999987643 334 67999999999
Q ss_pred eEecCCCEEEEEecCCeEEEEECCC-CceEEE--eeecCCcc----------cccCCCCCCeEEeeeccccCCCcccccC
Q 014590 317 HLQNDTSTLVVGGIDGVLRVLDQNT-GEVLSR--CVMDIGSA----------SSSSNKVSGVIERNEGRRLSAGCCIDRI 383 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~--~~~~~~~~----------~~~~~s~d~~i~~~~~~~~~~~~~~~~~ 383 (422)
|+|+|++|++++.|++|++||+.+ ++.... +..|...+ .+++++.|+++++|+...... .....
T Consensus 499 -fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~--~~~~~ 575 (611)
T 1nr0_A 499 -FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD--HPIII 575 (611)
T ss_dssp -ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS--CCEEE
T ss_pred -ECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc--ccchh
Confidence 999999999999999999999987 544332 22254444 566777777787776533211 11133
Q ss_pred CCCC-CCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 384 PKTI-RPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 384 ~~~h-~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
..+| ...|++++| ++. |+|++.|++|++|+++
T Consensus 576 ~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 576 KGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred hccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 4678 899999999 567 9999999999999984
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=300.80 Aligned_cols=286 Identities=14% Similarity=0.242 Sum_probs=229.3
Q ss_pred ceeeEEeecccc-ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEe--e-eCC-CceeeEEEecCCCeEE-EecCCe
Q 014590 102 RIDIDQWKAHSV-GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEE--Y-SLP-NAASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 102 ~~~~~~l~~H~~-~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~--~-~~~-~~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
...+.++.+|.+ .|.+++| ++| +|++|+.|++|+|||+.+++.... + .+| ..+..++|+|++++|+ ++.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 457789999998 9999999 566 999999999999999998864422 2 334 3466799999999999 899999
Q ss_pred EEEEECCCCce----eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc---eeeeeecCCccEEEEEecCC-C
Q 014590 174 ICIWRRNGLRS----VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK---CSQIIRMHCAPVTSLSLSED-Q 245 (422)
Q Consensus 174 i~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~-~ 245 (422)
+++|+..+... .+..+.+. +..+++.+++..|++|+.|++|++||+.++. ++..+.+|...|.+++|+|+ .
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~-v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENE-VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCC-ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999987642 23333333 4567777778889999999999999997763 46677899999999999987 8
Q ss_pred EEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC---------------ee
Q 014590 246 LIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM---------------KS 301 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~---------------~~ 301 (422)
++++++.|+.|++||.+++... ..|.+++|+|+|++|++|+.|++|++||.... ++
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 9999999999999999876422 78999999999999999999999999996421 23
Q ss_pred eeeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce----EEEeeecCCcccccCCCCCCeEEeeeccccCC
Q 014590 302 LWETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV----LSRCVMDIGSASSSSNKVSGVIERNEGRRLSA 376 (422)
Q Consensus 302 ~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~ 376 (422)
+..+.+ |...|++++ |+|++..|++++.|+.|++|+...+.. ...+..
T Consensus 244 ~~~~~~~h~~~v~~v~-~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~-------------------------- 296 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIA-WCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA-------------------------- 296 (345)
T ss_dssp EEEECSSCSSCEEEEE-ECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEE--------------------------
T ss_pred eEEecCCCCCcEEEEE-EecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe--------------------------
Confidence 344544 888999999 999999999999999999999875431 111111
Q ss_pred CcccccCCCCCCCCeEEEEec--C-EEEEEEeCCCeEEEEEccCCCC
Q 014590 377 GCCIDRIPKTIRPPITCLAVG--M-KKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 377 ~~~~~~~~~~h~~~v~~i~~~--~-~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
....+|...|++++|+ + .+|+|||.||+|++|++..+++
T Consensus 297 -----~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 297 -----HLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp -----EETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred -----eecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 1125688999999994 4 5999999999999999988765
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.3e-39 Score=294.45 Aligned_cols=289 Identities=16% Similarity=0.172 Sum_probs=234.3
Q ss_pred ceeeEEeeccccceeEEEe-cC-C-eEEEEecCCeEEEEEcCCC-----eEEEeeeCCC-ceeeEEEecCCCeEE-EecC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGY-----KCVEEYSLPN-AASLVDFDFDESKIV-GLIG 171 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~-~-~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~ 171 (422)
..+..+|+||.+.|++|+| |+ + +|+|||.||+|+|||+.++ .+...+.+|. .+..++|+|+++.++ ++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3456789999999999999 44 4 9999999999999998764 3566777664 456699999999998 9999
Q ss_pred CeEEEEECCCCceee-ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce-eeeeecCCccEEEEEecCC---CE
Q 014590 172 TRICIWRRNGLRSVF-PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQIIRMHCAPVTSLSLSED---QL 246 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~---~~ 246 (422)
+.|++|+........ ............+.+.++.+++|+.|+.+++||...... .....+|...+..++++++ .+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 999999998877542 233333444556666777799999999999999876543 4445788999999999864 57
Q ss_pred EEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 247 IISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
+++++.|+.|++||+++++.. ..|.+++|+|++++|++|+.||.|++||+++.+.+..+..+ ..|.++. ++
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~-~~ 265 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC-FS 265 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE-EC
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee-cC
Confidence 899999999999999988776 78999999999999999999999999999999999888765 5789998 98
Q ss_pred cCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--c
Q 014590 320 NDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--G 397 (422)
Q Consensus 320 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~ 397 (422)
|++. +++++.|+.|++||++++..+..+..+.. .....+|...|++++| +
T Consensus 266 ~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------------------------~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 266 PNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVI---------------------------STSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp SSSS-EEEEEETTEEEEEETTTTEEEEEECCC----------------------------------CCCCCEEEEEECTT
T ss_pred CCCc-eeeccCCCEEEEEECCCCeEEEeccccce---------------------------eeeccCCCCCEEEEEECCC
Confidence 8876 55666799999999998888877754322 1123568889999999 6
Q ss_pred CEEEEEEeCCCeEEEEEccCCCC
Q 014590 398 MKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 398 ~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
+++|+||+.||.|+|||+++|.|
T Consensus 318 g~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 318 GQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp SSEEEEEETTSCEEEEEEEC---
T ss_pred CCEEEEEeCCCEEEEEeCCCcCC
Confidence 89999999999999999999875
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-39 Score=300.21 Aligned_cols=271 Identities=19% Similarity=0.244 Sum_probs=228.5
Q ss_pred eeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-------------------ceeeEEEecCCCeE
Q 014590 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-------------------AASLVDFDFDESKI 166 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l 166 (422)
..+|.+.|.+++| ++| +|++|+ |+.+++|++.+++.+..+..+. .+..++|+|+++.|
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 3479999999999 577 888876 7899999999999888776542 25579999999999
Q ss_pred E-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC
Q 014590 167 V-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE 243 (422)
Q Consensus 167 ~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 243 (422)
+ ++.|+.|++||+.+++.+ +..+.+. +..+++.+++..+++++.|++|++||++++++...+. +...+.+++++|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQD-IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCC-EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEEC
Confidence 9 899999999999988754 3444443 4466677778889999999999999999998887776 567799999997
Q ss_pred -C-CEEEEEcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC--------
Q 014590 244 -D-QLIISGSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM-------- 299 (422)
Q Consensus 244 -~-~~l~s~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-------- 299 (422)
+ .++++|+.|+.|++||++++..+ ..|.+++|+|+|++|++|+.|+.|++||+++.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 4 79999999999999999887643 57999999999999999999999999999753
Q ss_pred ----eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccC
Q 014590 300 ----KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLS 375 (422)
Q Consensus 300 ----~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~ 375 (422)
.+...+.+|...|.+++ ++|++++|++|+.||.|++||+.+++++..+.+|
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h------------------------ 351 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVA-TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH------------------------ 351 (393)
T ss_dssp ----CEEEEEECCSSCEEEEE-ECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC------------------------
T ss_pred CCCCcceEEEecccCcEEEEE-ECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC------------------------
Confidence 34567788999999999 9999999999999999999999999988887654
Q ss_pred CCcccccCCCCCCCCeEEEEe--------cCEEEEEEeCCCeEEEEEccCC
Q 014590 376 AGCCIDRIPKTIRPPITCLAV--------GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 376 ~~~~~~~~~~~h~~~v~~i~~--------~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...|.+++| ++++|+||+.||+|++|++...
T Consensus 352 ------------~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 352 ------------RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ------------SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred ------------CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 458888887 2589999999999999998754
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.3e-39 Score=314.06 Aligned_cols=305 Identities=15% Similarity=0.229 Sum_probs=256.0
Q ss_pred cccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeE
Q 014590 99 EEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRI 174 (422)
Q Consensus 99 ~~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i 174 (422)
...+..+..+.+|...|.+++| +++ .+++++.|+.|++||.. ++.+..+.+|.. +..++|+|++..++ ++.|+.|
T Consensus 249 ~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i 327 (577)
T 2ymu_A 249 NRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 327 (577)
T ss_dssp CTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeE
Confidence 3445678889999999999999 566 99999999999999975 577777777644 45699999999998 8899999
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL 253 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d 253 (422)
++||..+............+..+++.+++..+++|+.|+.|++||. +++.+..+.+|...|.+++|+|+ +++++++.|
T Consensus 328 ~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 328 KLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp EEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCC
Confidence 9999887654322223334456677778888999999999999996 67888899999999999999987 899999999
Q ss_pred CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEE
Q 014590 254 GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLV 326 (422)
Q Consensus 254 g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~ 326 (422)
+.|++||.. ++.+ ..|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++ |+|++++|+
T Consensus 407 ~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~-~spd~~~la 483 (577)
T 2ymu_A 407 KTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVA-FSPDGQTIA 483 (577)
T ss_dssp SEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEE-ECTTSCEEE
T ss_pred CEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEE-EcCCCCEEE
Confidence 999999964 4433 78999999999999999999999999996 4778889999999999999 999999999
Q ss_pred EEecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe
Q 014590 327 VGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV 396 (422)
Q Consensus 327 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~ 396 (422)
+++.|+.|++||. +++++..+..|...+ .+++++.|+.|++|+. .+..+.. ..+|...|++++|
T Consensus 484 s~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~----~~~~~~~-~~~h~~~v~~~~f 557 (577)
T 2ymu_A 484 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR----NGQLLQT-LTGHSSSVWGVAF 557 (577)
T ss_dssp EEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT----TSCEEEE-EECCSSCEEEEEE
T ss_pred EEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC----CCCEEEE-EcCCCCCEEEEEE
Confidence 9999999999995 688888988887765 4556666777777652 2223333 3679999999999
Q ss_pred --cCEEEEEEeCCCeEEEEE
Q 014590 397 --GMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 397 --~~~~l~s~s~Dg~i~iW~ 414 (422)
|+++|+|++.|++|++||
T Consensus 558 s~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 558 SPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCEEEEEeCCCEEEEeC
Confidence 789999999999999997
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-39 Score=291.54 Aligned_cols=280 Identities=15% Similarity=0.165 Sum_probs=219.0
Q ss_pred ceeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCC--eEEEee-eC-C-CceeeEEEecCCCeEE-EecCCeEE
Q 014590 102 RIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY--KCVEEY-SL-P-NAASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~-~~-~-~~~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
...+++|++|.++|.+++|++++|++|+.|++|++||+.++ +....+ .. | ..+..++|+|++..|+ ++.|++|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 45678999999999999997669999999999999999875 455555 22 3 3466799999999998 89999999
Q ss_pred EEECCCCc------e---eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC----cceeeeeecCCccEEEEEec
Q 014590 176 IWRRNGLR------S---VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS----RKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 176 ~w~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~ 242 (422)
+|++.... . .+..+.+ .+..+++++++..|++|+.|++|++||+.. .+++..+.+|...|.+++|+
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHEN-EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEcccCcCccccceeEEEEcCCCC-cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99985421 1 1333333 344567777788899999999999999943 24677888999999999999
Q ss_pred CC-CEEEEEcCCCcEEEEeCCCCc--cc-------cceEeEEEecC--CCEEEEEeCCCeEEEEECCCC--------eee
Q 014590 243 ED-QLIISGSSLGSIAISGLSSDQ--RL-------TGIKTLCYNPC--SRLVFAGTTAGYASCWDLRTM--------KSL 302 (422)
Q Consensus 243 ~~-~~l~s~~~dg~i~iwd~~~~~--~~-------~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~--------~~~ 302 (422)
|+ .+|++++.|++|++||..++. .+ ..|.+++|+|+ +.+|++|+.|++|++||++++ ...
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 87 899999999999999987652 22 78999999998 779999999999999998754 344
Q ss_pred eeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccc
Q 014590 303 WETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCID 381 (422)
Q Consensus 303 ~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~ 381 (422)
..+.. |...|++++ |++++ +|++++.||.|++||..+++.......
T Consensus 243 ~~~~~~h~~~v~~v~-~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~------------------------------- 289 (330)
T 2hes_X 243 AILPDVHKRQVYNVA-WGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR------------------------------- 289 (330)
T ss_dssp EECCSCCSSCEEEEE-ECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE-------------------------------
T ss_pred eecccccccceEEEE-EcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc-------------------------------
Confidence 45554 889999999 88655 899999999999999876642111100
Q ss_pred cCCCCCCC-CeEEEEec----CEEEEEEeCCCeEEEEEccC
Q 014590 382 RIPKTIRP-PITCLAVG----MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 382 ~~~~~h~~-~v~~i~~~----~~~l~s~s~Dg~i~iW~~~~ 417 (422)
..+|.. .|++++|. +++|+||+.||+|++|+++.
T Consensus 290 --~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 290 --ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred --ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 123555 89999993 57899999999999999864
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-38 Score=289.64 Aligned_cols=288 Identities=14% Similarity=0.159 Sum_probs=225.6
Q ss_pred ceeeEEeeccccceeEEEe-----c--CC-eEEEEecCCeEEEEEcCC-------CeEEEeeeCCCc-eeeEEEecCCCe
Q 014590 102 RIDIDQWKAHSVGVDQCRM-----K--RG-LILTGVGDKVMRLWSLEG-------YKCVEEYSLPNA-ASLVDFDFDESK 165 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-----~--~~-~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~ 165 (422)
......|+||.+.|++++| . ++ +|+||+.|++|++||+.+ +.....+.+|.. +..++|+|++..
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 4567789999999999998 3 55 999999999999999874 345667777654 566999999999
Q ss_pred EE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee---ecCCccEEEE
Q 014590 166 IV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSL 239 (422)
Q Consensus 166 l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l 239 (422)
++ ++.|++|++||+.+++.+ +..+.+. +..+++.+++..+++++.|++|++||+.. +..... ..|...|.++
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~-v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSE-VYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSC-EEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCc-EEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeee
Confidence 98 899999999999988754 4444443 45677788888899999999999999974 333333 3788999999
Q ss_pred EecCC-----------CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCC-Cee
Q 014590 240 SLSED-----------QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT-MKS 301 (422)
Q Consensus 240 ~~~~~-----------~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~ 301 (422)
+|+|+ .++++++.|+.|++||....... ..|.+++|+|+|++|++|+.||.|++||+.+ ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 99975 48999999999999995432221 7899999999999999999999999999954 334
Q ss_pred eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEE--EeeecCCcccccCCCCCCeEEeeeccccCCCcc
Q 014590 302 LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLS--RCVMDIGSASSSSNKVSGVIERNEGRRLSAGCC 379 (422)
Q Consensus 302 ~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~ 379 (422)
...+ .+...|.+++ |+|++++++++ .|+.|++||+.+++... .+..+.. .
T Consensus 249 ~~~~-~~~~~v~~v~-~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~-------------------------~ 300 (343)
T 2xzm_R 249 QREF-DAGSTINQIA-FNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPI-------------------------T 300 (343)
T ss_dssp SEEE-ECSSCEEEEE-ECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSG-------------------------G
T ss_pred ceee-cCCCcEEEEE-ECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcc-------------------------h
Confidence 4343 3456799999 99999887655 57789999998776543 2221110 0
Q ss_pred cccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 380 IDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 380 ~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
......+|...|++++| ++++|++|+.||+|++|++++++
T Consensus 301 ~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 301 KAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp GBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 01112468889999999 68999999999999999998764
No 22
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-38 Score=283.02 Aligned_cols=279 Identities=15% Similarity=0.125 Sum_probs=237.8
Q ss_pred cccceeeEEeeccccceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEE
Q 014590 99 EEGRIDIDQWKAHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 99 ~~~~~~~~~l~~H~~~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
..+....+++.+|.+.|.+++|+++ +|++|+.||.|++||+.+++....+..+. .+..++|+|++..++ ++.|+.++
T Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 5 FTGYQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CCCCEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred cccHHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 3455678899999999999999766 99999999999999999998888887654 456699999999998 99999999
Q ss_pred EEECCCCc--eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-C-CEEEEEc
Q 014590 176 IWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-D-QLIISGS 251 (422)
Q Consensus 176 ~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~ 251 (422)
+|++.... .......++...+.++.+.+..+++++.|+.|++|| .++....+..|...+.++++.| + +.+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 99987653 222222333334566666888899999999999999 6778888899999999999986 4 8999999
Q ss_pred CCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 252 SLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
.||.|++||....... ..+.+++|+|++. +++++.||.|++||+++++.+..+.+|...|++++ |+|++ .|
T Consensus 163 ~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~-~~~~~-~l 239 (313)
T 3odt_A 163 ADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIK-LLPNG-DI 239 (313)
T ss_dssp TTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE-ECTTS-CE
T ss_pred CCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEE-EecCC-CE
Confidence 9999999995433222 7899999999998 99999999999999999999999999999999999 99999 58
Q ss_pred EEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEE
Q 014590 326 VVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVT 403 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s 403 (422)
++++.||.|++||+.+++.+..+..| ...|.+++| +++ +++
T Consensus 240 ~~~~~dg~v~iwd~~~~~~~~~~~~~------------------------------------~~~i~~~~~~~~~~-~~~ 282 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSLKQVITLP------------------------------------AISIWSVDCMSNGD-IIV 282 (313)
T ss_dssp EEEETTSEEEEECTTTCCEEEEEECS------------------------------------SSCEEEEEECTTSC-EEE
T ss_pred EEEecCCEEEEEECCCCceeEEEecc------------------------------------CceEEEEEEccCCC-EEE
Confidence 99999999999999999988888654 348999999 455 778
Q ss_pred EeCCCeEEEEEccCCC
Q 014590 404 THNSKYIRLWKFNYSD 419 (422)
Q Consensus 404 ~s~Dg~i~iW~~~~~~ 419 (422)
++.||.|++|++..++
T Consensus 283 ~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 283 GSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EETTSCEEEEESCGGG
T ss_pred EeCCCcEEEEeCCCCc
Confidence 9999999999998654
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.5e-38 Score=293.09 Aligned_cols=295 Identities=16% Similarity=0.158 Sum_probs=242.3
Q ss_pred eeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCe------EEEeeeCCC-ceeeEEEecC----C---CeEE-
Q 014590 103 IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYK------CVEEYSLPN-AASLVDFDFD----E---SKIV- 167 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~------~~~~~~~~~-~~~~~~~~~~----~---~~l~- 167 (422)
.....+.+|.+.|++++|++++|++|+.||.|++||+.+++ .+..+..+. .+..++|+++ + ..|+
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 35567899999999999977999999999999999999987 677777654 4566999999 8 8888
Q ss_pred EecCCeEEEEECCCCce-----e--eecCC----CceeeeEEEe----eeCCe-EEEecCCCeEEEEeCCC------cce
Q 014590 168 GLIGTRICIWRRNGLRS-----V--FPSRE----GTFMKGLCMR----YFDPE-AVVGCEDGTARVFDMYS------RKC 225 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~~-----~--~~~~~----~~~~~~~~~~----~~~~~-l~~~~~d~~i~iwd~~~------~~~ 225 (422)
++.|+.|++|++.++.. . +..+. ...+..+++. +.++. +++++.||.|++||+.+ ++.
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 88999999999987663 2 33332 2455677777 78888 99999999999999988 776
Q ss_pred ee-----eee-------cCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----c---------ceEeEEEecCCC
Q 014590 226 SQ-----IIR-------MHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----T---------GIKTLCYNPCSR 280 (422)
Q Consensus 226 ~~-----~~~-------~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~---------~v~~~~~~~~~~ 280 (422)
+. .+. .|...|.+++|+|+..+++++.||.|++||+++++.+ . .|.+++|+|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC
Confidence 66 664 4889999999997669999999999999999987654 3 589999999999
Q ss_pred EEEEEeCC---CeEEEEECCCCeeeeeecc-------------CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 281 LVFAGTTA---GYASCWDLRTMKSLWETRI-------------SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 281 ~l~~g~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
+|++++.| |.|++||+++++.+..+.. |...|.+++ |+|++++|++++.||.|++||+.+++.
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 99999999 9999999999999999998 999999999 999999999999999999999999999
Q ss_pred EEEee------ecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cC----------EEEEEEeC
Q 014590 345 LSRCV------MDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GM----------KKVVTTHN 406 (422)
Q Consensus 345 ~~~~~------~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~----------~~l~s~s~ 406 (422)
+..+. .|... ...+ .......|...|++++| ++ ++|++++.
T Consensus 326 ~~~~~~~~~~~~~~~~-------------------~~~g--~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~ 384 (397)
T 1sq9_A 326 ITTLNMHCDDIEIEED-------------------ILAV--DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL 384 (397)
T ss_dssp EEEEECCGGGCSSGGG-------------------CCCB--CTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET
T ss_pred eEEEecccCcccchhh-------------------hhcc--ccccccccCCceeEEEeccccccccccccccceEEEecC
Confidence 98887 33110 0000 00112345889999999 45 69999999
Q ss_pred CCeEEEEEccCCC
Q 014590 407 SKYIRLWKFNYSD 419 (422)
Q Consensus 407 Dg~i~iW~~~~~~ 419 (422)
||.|++|++..++
T Consensus 385 dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 385 DRSIRWFREAGGK 397 (397)
T ss_dssp TTEEEEEEEEC--
T ss_pred CCcEEEEEcCCCC
Confidence 9999999998763
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-37 Score=302.45 Aligned_cols=306 Identities=16% Similarity=0.246 Sum_probs=252.1
Q ss_pred cccceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeE
Q 014590 99 EEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRI 174 (422)
Q Consensus 99 ~~~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i 174 (422)
...+..+..+.+|...|.+++| +++ +|++++.|+.|++||.. ++.+..+..+.. +..++|+|++..++ ++.|+.|
T Consensus 208 ~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i 286 (577)
T 2ymu_A 208 NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTV 286 (577)
T ss_dssp CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 3445677889999999999999 566 99999999999999964 677777777644 45699999999998 8899999
Q ss_pred EEEECCCCce-eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 175 CIWRRNGLRS-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 175 ~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
++|+...... .+..+.+ .+..+++.+++..+++++.|+.|++||.. ++.+..+.+|...|.+++++|+ ..+++++.
T Consensus 287 ~~w~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 364 (577)
T 2ymu_A 287 KLWNRNGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASD 364 (577)
T ss_dssp EEEETTSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCcEEEEEecCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeC
Confidence 9999866542 2334433 33456677777889999999999999975 5566778899999999999987 89999999
Q ss_pred CCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 253 LGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 253 dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
|+.+++||.. ++.+ ..|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++ |+|++++|
T Consensus 365 dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~-~s~d~~~l 441 (577)
T 2ymu_A 365 DKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVA-FSPDDQTI 441 (577)
T ss_dssp TSEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEE-ECTTSSEE
T ss_pred CCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEE-ECCCCCEE
Confidence 9999999964 4433 78999999999999999999999999995 5788889999999999999 99999999
Q ss_pred EEEecCCeEEEEECCCCceEEEeeecCCccc----------ccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 326 VVGGIDGVLRVLDQNTGEVLSRCVMDIGSAS----------SSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~----------~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
++++.|+.|++||. +++.+..+..|...+. +++++.|+.|++|+. ....+. ...+|...|++++
T Consensus 442 ~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~----~~~~~~-~~~~h~~~v~~l~ 515 (577)
T 2ymu_A 442 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR----NGQLLQ-TLTGHSSSVRGVA 515 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET----TSCEEE-EEECCSSCEEEEE
T ss_pred EEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC----CCCEEE-EEeCCCCCEEEEE
Confidence 99999999999996 5778888888777664 445555666666552 222222 3357999999999
Q ss_pred e--cCEEEEEEeCCCeEEEEEcc
Q 014590 396 V--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 396 ~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
| |+++|++++.||.|++||.+
T Consensus 516 ~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 516 FSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTT
T ss_pred EcCCCCEEEEEECcCEEEEEeCC
Confidence 9 68999999999999999964
No 25
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=281.92 Aligned_cols=236 Identities=19% Similarity=0.278 Sum_probs=212.7
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
....+.||...|.++++ +++ ++++|+.|++|++||+.+++.+..+..+. .+..++|+|+++.++ ++.++.|++|++
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 45578999999999999 455 99999999999999999999999988754 455699999999999 889999999999
Q ss_pred CCCceeee-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 180 NGLRSVFP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 180 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
++++.... ...+..+..+++.++++.|++|+.|+.|++||+++++.+..+.+|..+|.+++|+|+ +++++|+.|+.|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 98875432 223344567788888889999999999999999999999999999999999999987 8999999999999
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEec
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+||+++++.. ..|.+++|+|++.+|++|+.|+.|++||+.+++++.++.+|...|.+++ |+|++++|++++.
T Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~-~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK-YNGNGSKIVSVGD 310 (321)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEET
T ss_pred EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEE-ECCCCCEEEEEeC
Confidence 9999987765 6799999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCeEEEEECC
Q 014590 331 DGVLRVLDQN 340 (422)
Q Consensus 331 dg~v~vwd~~ 340 (422)
||.|++||..
T Consensus 311 d~~i~vwd~p 320 (321)
T 3ow8_A 311 DQEIHIYDCP 320 (321)
T ss_dssp TCCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 9999999964
No 26
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-37 Score=282.09 Aligned_cols=280 Identities=15% Similarity=0.175 Sum_probs=242.0
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
.......|.+|.+.|++++| +++ +|++|+.||.|++||+.+++.+..+..|.. +..++|+|+++.++ ++.|+.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34466789999999999999 566 999999999999999999999999987654 56699999999998 889999999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCC-----CeEEEEeCCCcc-----------eeeeeecCCc--cEEE
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRK-----------CSQIIRMHCA--PVTS 238 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~-----------~~~~~~~~~~--~v~~ 238 (422)
||+.+++.+........+..+++.+.+..+++++.+ +.|++||+.++. ....+..|.. .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999988865444455556678888888889999998 999999987654 3344555666 8999
Q ss_pred EEecCC-CEEEEEcCCCcEEEEeCCC-Cccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC
Q 014590 239 LSLSED-QLIISGSSLGSIAISGLSS-DQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP 309 (422)
Q Consensus 239 l~~~~~-~~l~s~~~dg~i~iwd~~~-~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 309 (422)
++|+|+ +.+++++.||.|++||+++ ++.. ..|.+++|+|++++|++++.||.|++||+++++.+..+. +.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CC
Confidence 999987 8999999999999999998 4443 789999999999999999999999999999999888887 66
Q ss_pred CceeeeeeEecCCCEEEEEecCC--------------eEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccC
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDG--------------VLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLS 375 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg--------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~ 375 (422)
..+.+++ |+|+++++++++.++ .+++||..+++.+..+..
T Consensus 260 ~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~------------------------- 313 (369)
T 3zwl_B 260 CPLNTAV-ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG------------------------- 313 (369)
T ss_dssp SCEEEEE-ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-------------------------
T ss_pred CCceeEE-ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-------------------------
Confidence 8899999 999999999999988 899999999988888755
Q ss_pred CCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 376 AGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 376 ~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
|...|++++| ++++|++++.||.|++|+++.+
T Consensus 314 -----------~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 314 -----------HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp -----------CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred -----------ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 4458999999 6899999999999999999754
No 27
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-39 Score=301.06 Aligned_cols=313 Identities=13% Similarity=0.146 Sum_probs=232.8
Q ss_pred ccccceeeEEe-eccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCC---Ce---EEEeeeCCCceeeEEEecCCCeEE
Q 014590 98 LEEGRIDIDQW-KAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEG---YK---CVEEYSLPNAASLVDFDFDESKIV 167 (422)
Q Consensus 98 ~~~~~~~~~~l-~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~---~~---~~~~~~~~~~~~~~~~~~~~~~l~ 167 (422)
|...+..+..+ ++|.+.|++++| + ++ +|++|+.||+|++||+.+ +. ....+.+...+..++|+|++..|+
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE
Confidence 45567788888 999999999999 5 56 999999999999999876 43 344445556678899999999998
Q ss_pred -EecCCeEEEEECC---CCceee--ecC--------C-CceeeeEEEe----eeCCeEEEecCCCeEEEEeCCCcceeee
Q 014590 168 -GLIGTRICIWRRN---GLRSVF--PSR--------E-GTFMKGLCMR----YFDPEAVVGCEDGTARVFDMYSRKCSQI 228 (422)
Q Consensus 168 -~~~~~~i~~w~~~---~~~~~~--~~~--------~-~~~~~~~~~~----~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 228 (422)
++.|+.|++||++ +++... ..+ . ++...+.++. .++..+++|+.|+.|++||+++++.+..
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 8999999999985 332211 100 0 0111122222 3356699999999999999999999999
Q ss_pred eec--CCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEe----cCCCEEEEEeCCCeEEE
Q 014590 229 IRM--HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYN----PCSRLVFAGTTAGYASC 293 (422)
Q Consensus 229 ~~~--~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~----~~~~~l~~g~~dg~i~i 293 (422)
+.. |.+.|.+++|+|+ .++++|+.||.|++||+++++.+ ..|.+++++ |++.++++|+.||.|++
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 988 8999999999987 89999999999999999987765 578999665 46789999999999999
Q ss_pred EECCCCeeeeeecc--------------------------CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE
Q 014590 294 WDLRTMKSLWETRI--------------------------SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 294 wd~~~~~~~~~~~~--------------------------~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
||+++++.+..+.+ |...|++++ |+ ++++|++|+.||.|++||+.+++....
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~-~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS-VS-NDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE-EE-TTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE-EC-CceEEEecCCCCeEEEEECCCcccceE
Confidence 99999987776664 445577888 77 778999999999999999999999998
Q ss_pred eeecCCcc---cccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--c--CEEEEEEeCCCeEEEEE
Q 014590 348 CVMDIGSA---SSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--G--MKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 348 ~~~~~~~~---~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~--~~~l~s~s~Dg~i~iW~ 414 (422)
+..|.... .....+.+..+.... ......... .....|...|++++| + +.+|+||+.||.|+||+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRK-MKRTSTHSV-DDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEE-CC--------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEe-ccccccccc-CcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 88764421 111112222221111 111111111 233569999999999 4 67999999999999995
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=291.63 Aligned_cols=308 Identities=12% Similarity=0.118 Sum_probs=246.2
Q ss_pred EeeccccceeEEEe-cCC--eEEEEecCCeEEEEEc----CCCe------EEEeeeC----------CC-ceeeEEEecC
Q 014590 107 QWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSL----EGYK------CVEEYSL----------PN-AASLVDFDFD 162 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~----~~~~------~~~~~~~----------~~-~~~~~~~~~~ 162 (422)
....|.+.|.+++| +++ +|++|+.||.|++||+ .+++ ....+.. +. .+..++|+|+
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 33456699999999 444 8999999999999999 8887 4555554 23 5677999999
Q ss_pred CCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCcc------
Q 014590 163 ESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP------ 235 (422)
Q Consensus 163 ~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------ 235 (422)
++.|+ ++.++.|++||...............+..+++.+.+..+++++.|+.|++||+.+++.+..+..+...
T Consensus 120 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 99998 88999999999444332222223334456777777888999999999999999999999888877776
Q ss_pred ---------EEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCC
Q 014590 236 ---------VTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTM 299 (422)
Q Consensus 236 ---------v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 299 (422)
+.+++|+|++.+++++.||.|++||+++++.+ ..|.+++|+|++++|++++.||.|++||++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 89999999989999999999999999987765 78999999999999999999999999999999
Q ss_pred eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc----------cccCCCCCCeEEee
Q 014590 300 KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA----------SSSSNKVSGVIERN 369 (422)
Q Consensus 300 ~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~----------~~~~~s~d~~i~~~ 369 (422)
+.+..+..|...|.+++ |+|++ ++++++.||.|++||+.+++.+..+..|...+ .+++++.||.+.+|
T Consensus 280 ~~~~~~~~~~~~i~~~~-~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSAS-WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp SCSEEECCCSSCEEEEE-EETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ccceEecCCCccEEEEE-ECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 99999999999999999 99999 99999999999999999999888887766544 45666677777776
Q ss_pred eccccCCC----------------cccccCCCCCCC--CeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 370 EGRRLSAG----------------CCIDRIPKTIRP--PITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 370 ~~~~~~~~----------------~~~~~~~~~h~~--~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+....... .........|.. .|++++| ++++|++++.||.|++|+++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 65433200 002222345655 9999999 68899999999999999985
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-37 Score=287.31 Aligned_cols=278 Identities=11% Similarity=0.079 Sum_probs=229.3
Q ss_pred cceeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeee---CCCceeeEEEec-CCCeEE-EecCC
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYS---LPNAASLVDFDF-DESKIV-GLIGT 172 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~-~~~~l~-~~~~~ 172 (422)
.....+.+.+|.+.|.+++| +++ +|++|+.||.|++||+.+++....+. +...+..++|+| ++..++ ++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 45677889999999999999 454 99999999999999999888777765 334566799999 677777 88999
Q ss_pred eEEEEECCCCce-eeecCCC--ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-C-EE
Q 014590 173 RICIWRRNGLRS-VFPSREG--TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LI 247 (422)
Q Consensus 173 ~i~~w~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-~l 247 (422)
.|++||+.+... .+..+.+ ..+..+++.+.+..+++|+.|+.|++||+ +++.+..+..|...|.+++|+|+ . ++
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 999999997543 2333332 33567777888888999999999999999 67888999999999999999987 5 89
Q ss_pred EEEcCCCcEEEEeCCC----Cccc------cceEeEEEec-CCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-------
Q 014590 248 ISGSSLGSIAISGLSS----DQRL------TGIKTLCYNP-CSRLVFAGTTAGYASCWDLRTMKSLWETRISP------- 309 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~----~~~~------~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~------- 309 (422)
++++.|+.|++||+++ +..+ ..|.+++|+| ++++|++++.|+.|++||+++++....+.+|.
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL 300 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence 9999999999999987 3333 8899999999 99999999999999999999988777766553
Q ss_pred ----------CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcc
Q 014590 310 ----------NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCC 379 (422)
Q Consensus 310 ----------~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~ 379 (422)
+.+..++ ++|++++ +|+.||.|++||+.+++.+..+..+.
T Consensus 301 ~~~~~~~~p~~~~~~~~-~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~--------------------------- 350 (383)
T 3ei3_B 301 TPIKATWHPMYDLIVAG-RYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN--------------------------- 350 (383)
T ss_dssp CCCCCEECSSSSEEEEE-CBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT---------------------------
T ss_pred cceEEeccCCCCceEEE-ecCCccc--ccCCCCeEEEEecCCCceeeeecCCC---------------------------
Confidence 2233355 6677766 77899999999999999988886532
Q ss_pred cccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 380 IDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 380 ~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
|...+.+++| ++++|++|+ ||.|++|+++.
T Consensus 351 -------~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 351 -------AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp -------BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred -------CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 3457778888 689999997 99999999875
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.1e-38 Score=288.26 Aligned_cols=306 Identities=14% Similarity=0.099 Sum_probs=234.9
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe--EEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
.+..|.++|.+++| +++ +|++|+.|+.|++||+.+++ .+..+..|. .+..++|+|+++.++ ++.|+.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 35569999999999 566 99999999999999999987 888887664 456699999999998 8899999999998
Q ss_pred CCcee--e-ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce---e-eeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 181 GLRSV--F-PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC---S-QIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 181 ~~~~~--~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~-~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
+++.. . .......+..+++.+++..+++++.|+.|++||++.++. . .....|...|.+++|+|+ +++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 87632 1 122333455677777788899999999999999988762 2 333678899999999987 79999999
Q ss_pred CCcEEEEeCC------------------CCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 253 LGSIAISGLS------------------SDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 253 dg~i~iwd~~------------------~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
||.|++||++ .++.+ ..|.+++|+|++++|++++.||.|++||+++++++..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 9999999964 33333 6799999999999999999999999999999999999999
Q ss_pred CCCceeeeeeEecCCCEEEEEecCCeEEEEECCC--Cc--eEEEeeecCCcccccCCCCCCeEEeeeccccCCCccc---
Q 014590 308 SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT--GE--VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCI--- 380 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~--~~--~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~--- 380 (422)
|...|.+++ |+|++++|++| .|+.|++|++.+ ++ .+..+..+... .......+..+..... .....
T Consensus 243 ~~~~v~~~~-~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~ 315 (372)
T 1k8k_C 243 ETLPLLAVT-FITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQS----SQRGLTARERFQNLDK-KASSEGSA 315 (372)
T ss_dssp SSCCEEEEE-EEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC------------CHHHHHHHCCC-CC------
T ss_pred CCCCeEEEE-EecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccc----hhhhcchhhhhhhccc-ccccccCc
Confidence 999999999 99999988887 899999999987 53 22222221110 0000111111100010 01111
Q ss_pred ---ccCCCCCCCCeEEEEe---cC---EEEEEEeCCCeEEEEEccCCC
Q 014590 381 ---DRIPKTIRPPITCLAV---GM---KKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 381 ---~~~~~~h~~~v~~i~~---~~---~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+..+|...|++++| ++ .+|+||+.||.|++|++..++
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 3334589999999996 45 899999999999999997654
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-36 Score=275.76 Aligned_cols=272 Identities=15% Similarity=0.192 Sum_probs=229.9
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEE---Eeee---CCCceeeEEEecCCCeEE-EecCCeE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCV---EEYS---LPNAASLVDFDFDESKIV-GLIGTRI 174 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~---~~~~---~~~~~~~~~~~~~~~~l~-~~~~~~i 174 (422)
......+|.+.|.+++| +++ +|++++ ||.|++||+.+++.. ..+. ....+..++|+|+++.++ ++.++.|
T Consensus 43 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 33445589999999999 566 888888 999999999876432 2222 344567799999999988 8899999
Q ss_pred EEEECCCCce--e--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 175 CIWRRNGLRS--V--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 175 ~~w~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
++||+.+++. . +..+ ...+..+++.+.++.+++++.|+.|++||+++++.+..+..|...|.+++|+|+ +.+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp EEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEE
Confidence 9999998762 2 2222 333456677777788999999999999999999999999999999999999987 79999
Q ss_pred EcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 250 GSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
++.||.|++||+++++.+ ..+.+++|+|+++++++++.++.|++||+++++.. .+..|...|.+++ |+|+++
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~ 278 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLK-FAYCGK 278 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEE-ECTTSS
T ss_pred EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEE-ECCCCC
Confidence 999999999999988776 78999999999999999999999999999987654 6778999999999 999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEE
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKV 401 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l 401 (422)
+|++++.||.|++||+.+++.+.... |...|.+++| ++++|
T Consensus 279 ~l~~~~~dg~i~~~~~~~~~~~~~~~-------------------------------------~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 279 WFVSTGKDNLLNAWRTPYGASIFQSK-------------------------------------ESSSVLSCDISVDDKYI 321 (337)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-------------------------------------CSSCEEEEEECTTSCEE
T ss_pred EEEEecCCCcEEEEECCCCeEEEEec-------------------------------------CCCcEEEEEECCCCCEE
Confidence 99999999999999999888774431 3458999999 68999
Q ss_pred EEEeCCCeEEEEEcc
Q 014590 402 VTTHNSKYIRLWKFN 416 (422)
Q Consensus 402 ~s~s~Dg~i~iW~~~ 416 (422)
++++.||.|++|++.
T Consensus 322 ~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 322 VTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEecCCCeEEEEEEe
Confidence 999999999999974
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.1e-37 Score=287.47 Aligned_cols=304 Identities=12% Similarity=0.107 Sum_probs=246.3
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeee-cC
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFP-SR 189 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~-~~ 189 (422)
.+++++| +++ +|++|+.||.|++||+.+++....+..+.......++++++.|+ ++.|+.|++||+.++..... ..
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 3457888 566 99999999999999999887777776665555578899999998 88999999999998775433 22
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~- 267 (422)
....+..+++.+++..|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+ +++++++.|+.|++||+++++.+
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 3334456777777888999999999999999999999999999999999999987 89999999999999999987765
Q ss_pred ---------cceEe---------------------EEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-cCCCceeeee
Q 014590 268 ---------TGIKT---------------------LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR-ISPNVVYSLQ 316 (422)
Q Consensus 268 ---------~~v~~---------------------~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~ 316 (422)
..+.+ ++|+|+++++++|+.||.|++||+++++.+..+. .|...|.+++
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLT 297 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEE
Confidence 33444 4457899999999999999999999988777664 4788999999
Q ss_pred eEecCCC-EEEEEecCCeEEEEECCCCce-EEEeeecCCc-c---------cccCCCCCCeEEeeeccccCCCccc----
Q 014590 317 HLQNDTS-TLVVGGIDGVLRVLDQNTGEV-LSRCVMDIGS-A---------SSSSNKVSGVIERNEGRRLSAGCCI---- 380 (422)
Q Consensus 317 ~~s~~~~-~l~s~~~dg~v~vwd~~~~~~-~~~~~~~~~~-~---------~~~~~s~d~~i~~~~~~~~~~~~~~---- 380 (422)
|+|+++ +|++|+.||.|++||+++++. +..+..|... + .+++++.|+.+.+|+......+..+
T Consensus 298 -~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 376 (420)
T 3vl1_A 298 -VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFE 376 (420)
T ss_dssp -ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTT
T ss_pred -EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceecc
Confidence 999999 999999999999999998754 6666664332 2 6788889999988876653332211
Q ss_pred -ccCCCCCCCCeEEEEe--cCE---EEEEEeCCCeEEEEEccCC
Q 014590 381 -DRIPKTIRPPITCLAV--GMK---KVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 381 -~~~~~~h~~~v~~i~~--~~~---~l~s~s~Dg~i~iW~~~~~ 418 (422)
......|...|.+++| ++. .+++++.+|.+.+|+++.+
T Consensus 377 ~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 377 TPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp SCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred CccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccCC
Confidence 1123467889999999 566 7888889999999998753
No 33
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=281.14 Aligned_cols=298 Identities=14% Similarity=0.170 Sum_probs=226.2
Q ss_pred eeEEeeccccceeEEEe-cCC--eEEEEec---CCeEEEEEcCCCeEEEee--eCCCceeeEEEecC---CCeEE-EecC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG--LILTGVG---DKVMRLWSLEGYKCVEEY--SLPNAASLVDFDFD---ESKIV-GLIG 171 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~--~l~s~~~---dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~---~~~l~-~~~~ 171 (422)
....+++|.+.|.+++| +++ ++++|+. ||.|++||+.+++..... .+...+..++|+|+ +..++ ++.|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 34567899999999999 555 5566766 999999999998765443 44556778999998 58887 8899
Q ss_pred CeEEEEECCCCc-e--eeecCCCceeeeEE------EeeeCCeEEEecCCCeEEEEeCCCcc-eeeeeecCCc----cEE
Q 014590 172 TRICIWRRNGLR-S--VFPSREGTFMKGLC------MRYFDPEAVVGCEDGTARVFDMYSRK-CSQIIRMHCA----PVT 237 (422)
Q Consensus 172 ~~i~~w~~~~~~-~--~~~~~~~~~~~~~~------~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~----~v~ 237 (422)
+.|++||+.++. . .+..+.+.+ ..+. +.++++.+++++.|+.|++||+++++ .+..+..|.+ .+.
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEII-NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCE-EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CeEEEEeCCCCCccEEEEEecccce-EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 999999998876 2 233444433 2332 24556679999999999999999887 6777766655 889
Q ss_pred EEE----ecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEec---CCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 238 SLS----LSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNP---CSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 238 ~l~----~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~---~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
+++ |+|+ +++++++.||.|++||+++++.. ..|.+++|+| ++.++++|+.||.|++||+++++...
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 998 5665 89999999999999999988765 8899999999 99999999999999999999877766
Q ss_pred eec-----cCCCceeeeeeEecCCC-EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCC
Q 014590 304 ETR-----ISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAG 377 (422)
Q Consensus 304 ~~~-----~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~ 377 (422)
.+. +|...|++++ |+|+++ +|++++.||.|++||+.++............. ...+..
T Consensus 249 ~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~-----~~~~~~----------- 311 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVR-HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM-----GVAGSV----------- 311 (357)
T ss_dssp EEEEEEEECCSSCEEEEE-EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCC-----CCCCEE-----------
T ss_pred ceeeeccCCCcCCEEEEE-ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcc-----cccccc-----------
Confidence 555 8999999999 999998 89999999999999998765443221111000 000000
Q ss_pred cccccCCCCCCCCeEEEEe--cCEEEE-EEeCCCeEEEEEccCCCC
Q 014590 378 CCIDRIPKTIRPPITCLAV--GMKKVV-TTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 378 ~~~~~~~~~h~~~v~~i~~--~~~~l~-s~s~Dg~i~iW~~~~~~~ 420 (422)
.......+|...|++++| ++++|+ +++.||.|++|++...++
T Consensus 312 -~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 312 -SLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp -EEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred -ceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 001112457889999999 577777 899999999999987654
No 34
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-37 Score=288.58 Aligned_cols=237 Identities=18% Similarity=0.303 Sum_probs=210.9
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+...+++.+|.+.|.+++| +++ +|++|+.|++|++||+.+++++..+.+|.. +..++|+|++..++ ++.|++|++|
T Consensus 140 ~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~w 219 (410)
T 1vyh_C 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 219 (410)
T ss_dssp CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 3456789999999999999 566 999999999999999999999999988754 56699999999998 9999999999
Q ss_pred ECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC------------
Q 014590 178 RRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE------------ 243 (422)
Q Consensus 178 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~------------ 243 (422)
|+.++..+ +..+... +..+.+.+++..+++|+.|++|++||+.++++...+.+|...|.+++|+|
T Consensus 220 d~~~~~~~~~~~~h~~~-v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp ETTTCCEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred ECCCCcEEEEEeCCCcc-EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcc
Confidence 99988754 4444433 34556666777899999999999999999999999999999999999997
Q ss_pred ---------CCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 244 ---------DQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 244 ---------~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
+.++++|+.|+.|++||++++..+ ..|.+++|+|+|++|++|+.||.|++||+.+++++.++.+
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 358999999999999999998776 6799999999999999999999999999999999999999
Q ss_pred CCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 308 SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
|...|++++ |+|++.+|++|+.||+|++|+++
T Consensus 379 h~~~v~~l~-~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 379 HEHFVTSLD-FHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSCEEEEE-ECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCcEEEEE-EcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999 99999999999999999999863
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.3e-36 Score=298.34 Aligned_cols=295 Identities=17% Similarity=0.207 Sum_probs=231.2
Q ss_pred cceeeEEeeccccceeEEEec-CC--eEEEEecCCeEEEEEcCC-----CeEEEeeeCCCc-eeeEEEecCCCeEE-Eec
Q 014590 101 GRIDIDQWKAHSVGVDQCRMK-RG--LILTGVGDKVMRLWSLEG-----YKCVEEYSLPNA-ASLVDFDFDESKIV-GLI 170 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~~-~~--~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~ 170 (422)
.......+++|.+.|++++++ ++ +|+||+.|++|++||+.+ +.....+.+|.. +..++|+|+++.|+ ++.
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 334556799999999999994 33 899999999999999875 345667777654 56699999999998 899
Q ss_pred CCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee---ecCCccEEEEEecCC-
Q 014590 171 GTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSLSLSED- 244 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~~~- 244 (422)
|++|++||+.++... +..|.+. +..+++++++..+++|+.|++|++||.......... .+|...|.+++|+|+
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCcEEEEECCCCcceeEEeCCCCC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 999999999988744 4445444 346677777888999999999999998654333222 468899999999986
Q ss_pred --CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeee
Q 014590 245 --QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSL 315 (422)
Q Consensus 245 --~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 315 (422)
..+++++.|++|++||+++++.. ..|.+++|+|++++|++|+.||.|++||+++++.+..+..+ ..|.++
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~ 608 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHAL 608 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEE
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEE
Confidence 48999999999999999987765 78999999999999999999999999999999998887654 679999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
+ |+|++.+|++++ |+.|++||+.+++.+..+..+....... ....+ ......+...+++++
T Consensus 609 ~-~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~l~ 669 (694)
T 3dm0_A 609 C-FSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEK-ADNSG----------------PAATKRKVIYCTSLN 669 (694)
T ss_dssp E-ECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------------------------------CCCCEEEEE
T ss_pred E-EcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccc-ccccc----------------cccCCceeEEeeeEE
Confidence 9 999998887765 5669999999999988876543311000 00000 000112233578899
Q ss_pred e--cCEEEEEEeCCCeEEEEEcc
Q 014590 396 V--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 396 ~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
| ++++|+||+.||+|++|++.
T Consensus 670 ~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 670 WSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred EcCCCCEEEEEcCCCeEEEEecc
Confidence 9 68999999999999999985
No 36
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-38 Score=299.35 Aligned_cols=290 Identities=9% Similarity=0.021 Sum_probs=210.2
Q ss_pred EEEEecCCeEEEEEcCCCeEE----EeeeCC-CceeeEEEecC------CCeEE-EecCCeEEEEECCCCce--------
Q 014590 125 ILTGVGDKVMRLWSLEGYKCV----EEYSLP-NAASLVDFDFD------ESKIV-GLIGTRICIWRRNGLRS-------- 184 (422)
Q Consensus 125 l~s~~~dg~v~iwd~~~~~~~----~~~~~~-~~~~~~~~~~~------~~~l~-~~~~~~i~~w~~~~~~~-------- 184 (422)
+++++.|++|+|||+.+++.. ..+.++ ..+..++|+|+ +..|+ ++.|++|++||+.++..
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred hccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee
Confidence 344567899999999877542 334444 44666999997 46788 89999999999976532
Q ss_pred -----eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-eeeeeecCCccEEEE--EecCC--CEEEEEcCCC
Q 014590 185 -----VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-CSQIIRMHCAPVTSL--SLSED--QLIISGSSLG 254 (422)
Q Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~l--~~~~~--~~l~s~~~dg 254 (422)
.+..+.+ .+..+++.. +..|++|+.||+|++||+++++ +...+.+|...|.++ +++|+ ++|++|+.|+
T Consensus 256 ~~p~~~l~~h~~-~v~sv~~s~-~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~ 333 (524)
T 2j04_B 256 EKPSLTLSLADS-LITTFDFLS-PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG 333 (524)
T ss_dssp CSCSEEECCTTT-CEEEEEESS-SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred cCceEEEEcCCC-CEEEEEecC-CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence 1222222 223344433 3469999999999999998774 456688999999999 46664 6899999999
Q ss_pred cEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 255 SIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
+|++||+++++.. ..|.+++|+|+++.+++++.|++|++||++++.++.++.+|.+.|++++ |+|++++|
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva-~Sp~g~~l 412 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIG-VSRLHPMV 412 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEE-CCSSCCBC
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEE-eCCCCCeE
Confidence 9999999887653 2478999999999999999999999999999988888999999999999 99999999
Q ss_pred EEEecCCeEEEEECCCCceEEEeeec-----CCcccccCCCCCCeE-EeeeccccC---CCcccccCCCCCCCCeEEEEe
Q 014590 326 VVGGIDGVLRVLDQNTGEVLSRCVMD-----IGSASSSSNKVSGVI-ERNEGRRLS---AGCCIDRIPKTIRPPITCLAV 396 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~~~~~~-----~~~~~~~~~s~d~~i-~~~~~~~~~---~~~~~~~~~~~h~~~v~~i~~ 396 (422)
++|+.||+|++||+..+ .+..+... ...+..+++++++.+ ..+....+. ..........+|...|.+++|
T Consensus 413 ~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vaf 491 (524)
T 2j04_B 413 LAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKW 491 (524)
T ss_dssp EEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEE
T ss_pred EEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEEC
Confidence 99999999999998643 32222111 112345777888763 333322221 111222334679999999999
Q ss_pred c-----CEEEEEEeCCCeEEEEEccCC
Q 014590 397 G-----MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 397 ~-----~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+ +..+++|+.||.|+||++...
T Consensus 492 sp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 492 NETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCCCccHHHHhhccCceEEEEEcccc
Confidence 4 349999999999999998754
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-38 Score=292.58 Aligned_cols=307 Identities=18% Similarity=0.189 Sum_probs=245.8
Q ss_pred cccceeEEEe-cCC--eEEEE----------ecCCeEEEEEcCCCe---EEEeeeCCCceeeEEEecCCCeEE-EecCCe
Q 014590 111 HSVGVDQCRM-KRG--LILTG----------VGDKVMRLWSLEGYK---CVEEYSLPNAASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 111 H~~~v~~v~~-~~~--~l~s~----------~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
+...|.+++| +++ +|++| +.|+.|++||+.+++ .+..+.+...+..++|+|++..|+ ++.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 4457899999 555 89999 899999999999875 455555566778899999999998 889999
Q ss_pred EEEEECCC---Cc-ee--eecCCCceeeeEEEeee-CCeEEEecCCCeEEEEeCCCcc------eee---eeecCCccEE
Q 014590 174 ICIWRRNG---LR-SV--FPSREGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRK------CSQ---IIRMHCAPVT 237 (422)
Q Consensus 174 i~~w~~~~---~~-~~--~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~------~~~---~~~~~~~~v~ 237 (422)
|++|++.+ +. .+ +..+.+ .+..+++.++ +..+++++.|+.|++||+.+++ ... .+..|...|.
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSS-SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSS-CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred EEEeecccccccccchhhccCCcc-ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 99999987 22 22 233333 3445666666 6679999999999999998876 332 3367899999
Q ss_pred EEEecCC--CEEEEEcCCCcEEEEeCCCCccc-------------cceEeEEEecCC-CEEEEEeCCC---eEEEEECCC
Q 014590 238 SLSLSED--QLIISGSSLGSIAISGLSSDQRL-------------TGIKTLCYNPCS-RLVFAGTTAG---YASCWDLRT 298 (422)
Q Consensus 238 ~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~-~~l~~g~~dg---~i~iwd~~~ 298 (422)
+++|+|+ .++++++.|+.|++||+++++.+ ..|.+++|+|++ .++++++.|+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 9999986 79999999999999999987654 359999999997 6899999998 999999998
Q ss_pred C-eeeeeec-cCCCceeeeeeEec-CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc-----------cccCCCCCC
Q 014590 299 M-KSLWETR-ISPNVVYSLQHLQN-DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA-----------SSSSNKVSG 364 (422)
Q Consensus 299 ~-~~~~~~~-~~~~~v~~l~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~-----------~~~~~s~d~ 364 (422)
+ +++..+. +|...|.+++ |+| ++++|++++.||.|++||+.+++++..+..|...+ .+++++.|+
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~-~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLD-WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEE-ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred CCCCcEEeecCccCceeEEE-eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC
Confidence 6 6777888 8999999999 999 89999999999999999999999999998876644 566777788
Q ss_pred eEEeeeccccCCCcccc-------------------------------cCCCCCCCCeEEEEe--cCEEEEEEeCCCeEE
Q 014590 365 VIERNEGRRLSAGCCID-------------------------------RIPKTIRPPITCLAV--GMKKVVTTHNSKYIR 411 (422)
Q Consensus 365 ~i~~~~~~~~~~~~~~~-------------------------------~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~ 411 (422)
.+.+|+........... ..+..|..++.+++| +|++|++++.||+|+
T Consensus 329 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 329 KIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp EEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred cEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 88777665433221110 112236778878888 799999999999999
Q ss_pred EEEccCCC
Q 014590 412 LWKFNYSD 419 (422)
Q Consensus 412 iW~~~~~~ 419 (422)
||++.+++
T Consensus 409 ~w~~~~~~ 416 (416)
T 2pm9_A 409 ITNPKISG 416 (416)
T ss_dssp CBCCCCC-
T ss_pred EEEeccCC
Confidence 99998753
No 38
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4e-36 Score=268.91 Aligned_cols=238 Identities=13% Similarity=0.180 Sum_probs=203.5
Q ss_pred EEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEe
Q 014590 144 CVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFD 219 (422)
Q Consensus 144 ~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 219 (422)
..+++.+|. .+..++|+|++..++ ++.|++|++||+.++..+ +..+.. .+....+.+.++.+++|+.|++|++||
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 345666654 466799999999999 899999999999988754 333333 345677888888899999999999999
Q ss_pred CCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEec-CCCEEEEEeCCC
Q 014590 220 MYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNP-CSRLVFAGTTAG 289 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~-~~~~l~~g~~dg 289 (422)
+.+++.+..+.+|.+.|.+++|+|+ .++++|+.|++|++||++++... ..|.+++|+| ++.++++|+.|+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 9999999999999999999999987 89999999999999999876433 7899999999 678999999999
Q ss_pred eEEEEECCCCeeeeeec-cCCCceeeeeeEec--CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeE
Q 014590 290 YASCWDLRTMKSLWETR-ISPNVVYSLQHLQN--DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVI 366 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i 366 (422)
.|++||++++.+...+. +|...+..+. ++| ++++|++|+.|++|++||+++++++.++.+|
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h--------------- 227 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVD-YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--------------- 227 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEE-ECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC---------------
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEE-EEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC---------------
Confidence 99999998877666654 4557888888 665 7789999999999999999999998888654
Q ss_pred EeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 367 ERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
...|.+++| ++++|+||+.||+|++||+.+++
T Consensus 228 ---------------------~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 228 ---------------------MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp ---------------------SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred ---------------------CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 458999999 57899999999999999987653
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=276.73 Aligned_cols=287 Identities=13% Similarity=0.143 Sum_probs=233.9
Q ss_pred hccccceeeEEeeccccceeE--EEecCCeEEEEecCCeEEEEEcCCCeEEEeeeC--CCceeeEEEecCCCeEE-EecC
Q 014590 97 ALEEGRIDIDQWKAHSVGVDQ--CRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL--PNAASLVDFDFDESKIV-GLIG 171 (422)
Q Consensus 97 ~~~~~~~~~~~l~~H~~~v~~--v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~ 171 (422)
.+......+....+|.+.+.+ +.++++.+++++.||.|++||+.+++....+.. ...+..++|+|++..|+ ++.|
T Consensus 76 ~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d 155 (401)
T 4aez_A 76 RFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN 155 (401)
T ss_dssp CCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC
Confidence 334445566666788876544 666667888999999999999999998888776 34567799999999998 8899
Q ss_pred CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC-CcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-SRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
|.|++||+.+++.+... .++...+.++.+.+..+++|+.||.|++||++ .+..+..+.+|.+.|.+++|+|+ .++++
T Consensus 156 g~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTM-AGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp SCEEEEETTTCCEEEEE-CCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CeEEEEECcCCeEEEEe-cCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 99999999987754222 13333456666678889999999999999998 46678888999999999999987 89999
Q ss_pred EcCCCcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEe--CCCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 250 GSSLGSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGT--TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
|+.|+.|++||+++++.. ..|.+++|+|++ .++++|+ .|+.|++||+.+++.+..+. +...|.+++ |+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~-~s 312 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLI-WS 312 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEE-EC
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEE-EC
Confidence 999999999999987765 789999999977 4566654 79999999999999988886 557899999 99
Q ss_pred cCCCEEEE--EecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-
Q 014590 320 NDTSTLVV--GGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV- 396 (422)
Q Consensus 320 ~~~~~l~s--~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~- 396 (422)
|+++++++ |+.||.|++||+.+++....... .+|...|.+++|
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~----------------------------------~~h~~~v~~~~~s 358 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI----------------------------------PAHDTRVLYSALS 358 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE----------------------------------ECCSSCCCEEEEC
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccceeEEEe----------------------------------cCCCCCEEEEEEC
Confidence 99999999 44899999999988765554322 235678999999
Q ss_pred -cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 397 -GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 397 -~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
++.+|++++.||.|++|++..++.
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcc
Confidence 689999999999999999987653
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.3e-36 Score=276.28 Aligned_cols=273 Identities=13% Similarity=0.146 Sum_probs=225.7
Q ss_pred EEeeccccceeEEEecC-----C-eEEEEecCCeEEEEEcCCCeEEEeeeC------CCceeeEEEecC----CCeEE-E
Q 014590 106 DQWKAHSVGVDQCRMKR-----G-LILTGVGDKVMRLWSLEGYKCVEEYSL------PNAASLVDFDFD----ESKIV-G 168 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~~-----~-~l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~----~~~l~-~ 168 (422)
...++|.++|.+++|+. . .+++++.++.|++||+.+++.+..+.. ...+..++|+|+ +..++ +
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 34558999999999941 3 677777788999999998877666653 245677999999 55777 8
Q ss_pred ecCCeEEEEECCCCcee--eecCCCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeee---ecCCccEEEEEec
Q 014590 169 LIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSLSLS 242 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~ 242 (422)
+.|+.|++||+.+++.+ +..+.+ .+..+++.+ .+..+++|+.||.|++||+++++.+..+ ..|...|.+++|+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGN-AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred cCCCEEEEEEchhceEeeeecCCCC-cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 99999999999987754 333333 345666666 6677999999999999999999988888 6899999999999
Q ss_pred CC-CEEEEEcCCCcEEEEeCCCCccc-----------------------------------cceEeEEEecCCCEEEEEe
Q 014590 243 ED-QLIISGSSLGSIAISGLSSDQRL-----------------------------------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 243 ~~-~~l~s~~~dg~i~iwd~~~~~~~-----------------------------------~~v~~~~~~~~~~~l~~g~ 286 (422)
|+ +++++++.||.|++||+++++.. ..|.+++|+ ++++++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 87 89999999999999999876432 568899998 77999999
Q ss_pred CCCeEEEEECCCCee--------------eeeeccCCCceeeeeeEecC--CCEEEEEecCCeEEEEECCCCceEE----
Q 014590 287 TAGYASCWDLRTMKS--------------LWETRISPNVVYSLQHLQND--TSTLVVGGIDGVLRVLDQNTGEVLS---- 346 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~--------------~~~~~~~~~~v~~l~~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~---- 346 (422)
.||.|++||+.+++. +..+..|...|++++ |+|+ +++|++|+.||.|++||+.+++...
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR-FSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC-CEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE-EcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 999999999987643 777888999999999 9999 9999999999999999999876433
Q ss_pred EeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 347 RCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 347 ~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
.+..| .|...|++++| ++++|++++.||.|++||+.
T Consensus 328 ~~~~~----------------------------------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 328 TLTHH----------------------------------KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECCT----------------------------------TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEccc----------------------------------ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 33221 13679999999 68999999999999999985
No 41
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.4e-36 Score=267.70 Aligned_cols=242 Identities=15% Similarity=0.204 Sum_probs=194.8
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC--CeEEEeeeCCCce-eeEEEecCCCeEEEecCCeEEEEEC
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG--YKCVEEYSLPNAA-SLVDFDFDESKIVGLIGTRICIWRR 179 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~w~~ 179 (422)
+..+.+|.+.|.+++| ++| +|+||+.|++|+|||+.+ ++.+.++.+|... ..++|+++.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~---------------- 65 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK---------------- 65 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGG----------------
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCC----------------
Confidence 4568899999999999 566 999999999999999974 3566677666432 335554320
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC---CEEEEEcCCC
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED---QLIISGSSLG 254 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg 254 (422)
.+..|++|+.|++|++||+++++ .+..+.+|...|.+++|+|+ .++++++.|+
T Consensus 66 ----------------------~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 66 ----------------------FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp ----------------------GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ----------------------cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 13348899999999999998774 56667889999999999984 6999999999
Q ss_pred cEEEEeCCCCccc---------cceEeEEEecC-------------CCEEEEEeCCCeEEEEECCCCe----eeeeeccC
Q 014590 255 SIAISGLSSDQRL---------TGIKTLCYNPC-------------SRLVFAGTTAGYASCWDLRTMK----SLWETRIS 308 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------~~v~~~~~~~~-------------~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~~ 308 (422)
.|++||++++... ..|.+++|+|+ +++|++|+.|+.|++||+++++ ...++.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 9999999876321 67999999997 5799999999999999998765 56788899
Q ss_pred CCceeeeeeEecCC---CEEEEEecCCeEEEEECCCCce--EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccC
Q 014590 309 PNVVYSLQHLQNDT---STLVVGGIDGVLRVLDQNTGEV--LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRI 383 (422)
Q Consensus 309 ~~~v~~l~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~ 383 (422)
...|.+++ |+|++ ++|++++.|++|++||+.++.. ......
T Consensus 204 ~~~V~~v~-~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~--------------------------------- 249 (297)
T 2pm7_B 204 SDWVRDVA-WSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK--------------------------------- 249 (297)
T ss_dssp SSCEEEEE-ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS---------------------------------
T ss_pred CCceEEEE-ECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee---------------------------------
Confidence 99999999 99985 7999999999999999876431 111100
Q ss_pred CCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 384 PKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 384 ~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...|...|.+++| ++++|++++.||+|++|+....
T Consensus 250 ~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 250 EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 1245678999999 6899999999999999998754
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.8e-36 Score=270.76 Aligned_cols=235 Identities=19% Similarity=0.278 Sum_probs=206.1
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC----eEEEeeeCCCc-eeeEEEecCCCeEEEecCCeE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRI 174 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i 174 (422)
+..+..+.+|...|.+++| +++ +|++|+.|+.|++||+.++ +....+.+|.. +..+.|++++..+.++.|++|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i 166 (340)
T 1got_B 87 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166 (340)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCE
T ss_pred CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcE
Confidence 4567788999999999999 566 9999999999999999875 45566666654 455889888875559999999
Q ss_pred EEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc
Q 014590 175 CIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (422)
Q Consensus 175 ~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~ 251 (422)
++||+.+++.+ +..+.+. +..+++.+.+..+++|+.|+.|++||++++++...+.+|...|.+++|+|+ +++++|+
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGD-VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCc-eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 99999988754 3344443 446677777778999999999999999999999999999999999999987 8999999
Q ss_pred CCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 252 SLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
.||+|++||+++++.+ ..|.+++|+|+|+++++|+.||.|++||+.+++.+..+.+|.+.|.+++ |+|++
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~-~s~dg 324 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG-VTDDG 324 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE-ECTTS
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEE-EcCCC
Confidence 9999999999987654 4699999999999999999999999999999999999999999999999 99999
Q ss_pred CEEEEEecCCeEEEEE
Q 014590 323 STLVVGGIDGVLRVLD 338 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd 338 (422)
++|++|+.||.|++||
T Consensus 325 ~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 325 MAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEETTSCEEEEC
T ss_pred CEEEEEcCCccEEecC
Confidence 9999999999999996
No 43
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-35 Score=268.06 Aligned_cols=238 Identities=21% Similarity=0.297 Sum_probs=202.5
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+..++.+++|...|.+++| +++ +|++|+.|++|++||+.+++.+..+.+|.. +..++|+|++..++ ++.|++|++|
T Consensus 55 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vw 134 (319)
T 3frx_A 55 GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134 (319)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 3467889999999999999 566 999999999999999999999999988755 55699999999998 9999999999
Q ss_pred ECCCCcee-eecCCCceeeeEEEeee------CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 178 RRNGLRSV-FPSREGTFMKGLCMRYF------DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
|+.+.... +..+.+. +..+.+.+. +..+++++.|+.|++||+++++....+.+|...|.+++|+|+ .++++
T Consensus 135 d~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 135 TIKGQCLATLLGHNDW-VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp ETTSCEEEEECCCSSC-EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeEEEEeccCCc-EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE
Confidence 99765432 3333333 334444443 235999999999999999999999999999999999999987 89999
Q ss_pred EcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec--------cCCCceeee
Q 014590 250 GSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR--------ISPNVVYSL 315 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------~~~~~v~~l 315 (422)
|+.||.|++||+.+++.+ ..|.+++|+|++.++++++.++ +++|++..+..+..+. .|...+.++
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 292 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSL 292 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEE
Confidence 999999999999988766 7899999999999999988655 9999998876665553 345678999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
+ |+|+|++|++|+.||.|++||+.++
T Consensus 293 ~-~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 293 A-WSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp E-ECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred E-ECCCCCEEEEeecCceEEEEEEeec
Confidence 9 9999999999999999999998754
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-37 Score=284.15 Aligned_cols=306 Identities=11% Similarity=0.100 Sum_probs=216.5
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC--eEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
.++.|.++|.+++| +++ +|++|+.|+.|++||+.++ +.+..+..|. .+..++|+|+++.|+ ++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 45567889999999 566 9999999999999999998 6777787765 456699999999998 8899999999998
Q ss_pred CCc---ee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc---eeeeeec-CCccEEEEEecCC-CEEEEE
Q 014590 181 GLR---SV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK---CSQIIRM-HCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 181 ~~~---~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~l~~~~~-~~l~s~ 250 (422)
++. .. +..+. ..+..+++.+++..+++++.|+.|++||+++++ ....+.. |...|.+++|+|+ ++++++
T Consensus 86 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLN-RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ---CCCCEEECCCCS-SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeeEecccC-CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 876 22 22333 334556666677789999999999999999887 4677777 9999999999987 899999
Q ss_pred cCCCcEEEEeCCCCc------------------cc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee----e
Q 014590 251 SSLGSIAISGLSSDQ------------------RL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS----L 302 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~------------------~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~----~ 302 (422)
+.|+.|++||+..+. .+ ..|.+++|+|++++|++++.||.|++||+.+++. +
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 999999999985322 11 6699999999999999999999999999999887 7
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc--eEEEeeecCCcccccCCCCCC-------eE------E
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE--VLSRCVMDIGSASSSSNKVSG-------VI------E 367 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~s~d~-------~i------~ 367 (422)
..+.+|...|.+++ |+|++++|++|+.++.+ +|+..... ....+..............++ .+ .
T Consensus 245 ~~~~~~~~~v~~~~-~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (377)
T 3dwl_C 245 ITVKLSQLPLRSLL-WANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRS 322 (377)
T ss_dssp CCEECSSSCEEEEE-EEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----------
T ss_pred EeecCCCCceEEEE-EcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccc
Confidence 88999999999999 99999999999877766 66654221 112221111100000000000 00 0
Q ss_pred eeecccc-CCCcccccCCCCCCCCeEEEEe-cC-----EEEEEEeCCCeEEEEEc
Q 014590 368 RNEGRRL-SAGCCIDRIPKTIRPPITCLAV-GM-----KKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 368 ~~~~~~~-~~~~~~~~~~~~h~~~v~~i~~-~~-----~~l~s~s~Dg~i~iW~~ 415 (422)
....... ........+...|...|+++++ .+ ..|+|||.||.|++||+
T Consensus 323 ~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 323 TFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000000 0000223344669999999997 22 27999999999999985
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-36 Score=316.84 Aligned_cols=310 Identities=15% Similarity=0.211 Sum_probs=254.3
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
....+.+|.+.|++++| +++ ++++|+.||+|++||+.+++.+..+.+|.. +..++|+|+++.++ ++.|+.|++||+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 34578899999999999 566 999999999999999999999999987654 56699999999999 889999999999
Q ss_pred CCCcee--eecCCCceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC
Q 014590 180 NGLRSV--FPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG 254 (422)
Q Consensus 180 ~~~~~~--~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg 254 (422)
.+++.+ +..+.+. +..+++.+. ...+++|+.|+.|++||+++++++..+.+|.+.|.+++|+|+ +.+++++.||
T Consensus 687 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQ-VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTCCEEEEEECCSSC-EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCceEEEEcCCCCc-EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 988754 3444333 345555553 234899999999999999999999999999999999999987 8999999999
Q ss_pred cEEEEeCCCCccc--------------------------------------------------------------cceEe
Q 014590 255 SIAISGLSSDQRL--------------------------------------------------------------TGIKT 272 (422)
Q Consensus 255 ~i~iwd~~~~~~~--------------------------------------------------------------~~v~~ 272 (422)
.|++||+.++... ..+.+
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~ 845 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQY 845 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCE
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEE
Confidence 9999998765311 46778
Q ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc---------
Q 014590 273 LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE--------- 343 (422)
Q Consensus 273 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~--------- 343 (422)
++|+|+++++++++.||.|++||+.++..+..+.+|...|.+++ |+|++++|++++.||.|++||+.++.
T Consensus 846 ~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~-~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 924 (1249)
T 3sfz_A 846 CDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM-FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924 (1249)
T ss_dssp EEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEE-ECCCCCEEEEEeCCCeEEEEEccccceeeeecccc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999965311
Q ss_pred --------------------------------------eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCC
Q 014590 344 --------------------------------------VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPK 385 (422)
Q Consensus 344 --------------------------------------~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~ 385 (422)
.+..+..++....+++++.+|.+.+++... .... ....
T Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~---~~~~-~~~~ 1000 (1249)
T 3sfz_A 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN---NRVF-SSGV 1000 (1249)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT---TSCE-EECC
T ss_pred eeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC---Ccee-eecc
Confidence 011122223333566677777777655432 2222 2335
Q ss_pred CCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 386 TIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 386 ~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
+|...|++++| ++++|++++.||.|++|++..++
T Consensus 1001 ~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 78999999999 68999999999999999988753
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-36 Score=284.40 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=217.5
Q ss_pred eeEEeeccccceeEEEec--CC-eEEEEecCCeEEEEEcCCCeE--EEeeeCC-CceeeEEEec-CCCeEE-EecCCeEE
Q 014590 104 DIDQWKAHSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKC--VEEYSLP-NAASLVDFDF-DESKIV-GLIGTRIC 175 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~--~~~~~~~-~~~~~~~~~~-~~~~l~-~~~~~~i~ 175 (422)
......+|...|+||+|+ ++ +||+|+.||+|+|||+.+++. ...+.+| ..+..++|+| ++..|+ ++.|++|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 445678899999999994 34 999999999999999987654 3344444 4567799998 678888 88999999
Q ss_pred EEECCCCcee-eecCCCce--eeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEE
Q 014590 176 IWRRNGLRSV-FPSREGTF--MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 176 ~w~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
+||+++.... +....... ...+++.+++..+++|+.||.|++||++ ++.+..+.+|...|.+++|+|+ .++++|
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence 9999876532 33333322 3456667778889999999999999985 5677788999999999999986 588999
Q ss_pred cCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCC------ceee
Q 014590 251 SSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPN------VVYS 314 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~ 314 (422)
+.|+.|++||+++++.. ..|.+++|+|+|++|++|+.||.|++||+.+++....+..|.. .+..
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 99999999999876543 6899999999999999999999999999999887777766542 1233
Q ss_pred eeeEecCCCEEEEEe------------cCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 315 LQHLQNDTSTLVVGG------------IDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 315 l~~~s~~~~~l~s~~------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
.. ++|++..+++++ .++.|++||..+++.+..+..
T Consensus 350 ~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~-------------------------------- 396 (435)
T 4e54_B 350 AA-WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD-------------------------------- 396 (435)
T ss_dssp CE-ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC--------------------------------
T ss_pred EE-EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC--------------------------------
Confidence 44 677777766664 345799999999988877643
Q ss_pred CCCCCCCCeEEE-Ee--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 383 IPKTIRPPITCL-AV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 383 ~~~~h~~~v~~i-~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
+|...|.++ +| ++.+|++|+ |++|+||+++.++
T Consensus 397 ---~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 397 ---PESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp ---SSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred ---CCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 345677776 57 688888876 8899999998765
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.8e-35 Score=296.26 Aligned_cols=260 Identities=15% Similarity=0.200 Sum_probs=228.3
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
...+.+.+|.+.|.+++| +++ +|++|+.||.|+|||+.+++.+..+..|. .+..++|+|+++.|+ ++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 356789999999999999 566 99999999999999999999999998764 456799999999998 88999999999
Q ss_pred CCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecC-C-CEEEEEcCC
Q 014590 179 RNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSE-D-QLIISGSSL 253 (422)
Q Consensus 179 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d 253 (422)
+.+++.+ +..+.+ .+..++++++++.+++++.||.|++||++++ .....+.+|...|.+++|+| + +.+++++.|
T Consensus 84 ~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp TTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCCcEEEEEecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 9988754 333443 4557788888889999999999999999887 67788889999999999998 5 799999999
Q ss_pred CcEEEEeCCCCccc--------cceEeEEEec--CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC
Q 014590 254 GSIAISGLSSDQRL--------TGIKTLCYNP--CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 254 g~i~iwd~~~~~~~--------~~v~~~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
|.|++||+.++... ..+.+++|+| ++.++++|+.||.|++||+.+++.+..+.+|...|.+++ |+|+++
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~ 241 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLP 241 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSS
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCC
Confidence 99999999877655 6789999999 999999999999999999999999999999999999999 999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCC
Q 014590 324 TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSG 364 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~ 364 (422)
+|++++.||.|++||+.+++.+..+..+...+..++.++++
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC
Confidence 99999999999999999999998888776655444444443
No 48
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=270.19 Aligned_cols=234 Identities=14% Similarity=0.119 Sum_probs=191.9
Q ss_pred EeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEee----eCC-CceeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 107 QWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEY----SLP-NAASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
....|...|.+++| +++.|++|+.||+|+|||+.+++.+..+ .+| ..+..++|+|+++.|+ ++.|++|++||+
T Consensus 77 ~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34457888999999 5669999999999999999988754433 244 4566799999999999 899999999999
Q ss_pred CCCcee--eecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeeee--cCCccEEEEEecCC--CEEEEEcC
Q 014590 180 NGLRSV--FPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED--QLIISGSS 252 (422)
Q Consensus 180 ~~~~~~--~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~--~~l~s~~~ 252 (422)
.+++.+ +..|.+. +..+++.+.+. .+++|+.|++|++||+++++....+. .|...+.+++|+|+ +++++|+.
T Consensus 157 ~~~~~~~~~~~h~~~-V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQ-VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTEEEEEECCCSSC-EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCcEEEEEcCcCCc-eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 998754 3444443 34556666665 48899999999999999999887764 45567899999974 68999999
Q ss_pred CCcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-
Q 014590 253 LGSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS- 323 (422)
Q Consensus 253 dg~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~- 323 (422)
||+|++||+++++.+ ..|++++|+|++ ++|++|+.|++|++||+.+++.+ .+.+|.+.|++++ |+|+++
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~-~sp~~~~ 313 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDAT-WSPLNHS 313 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEE-ECSSSTT
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEE-EeCCCCe
Confidence 999999999998876 789999999998 57999999999999999988765 5789999999999 999986
Q ss_pred EEEEEecCCeEEEEECCCCc
Q 014590 324 TLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~ 343 (422)
+|++++.||+|++|++.+..
T Consensus 314 llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEEETTSCEEEEECCC--
T ss_pred EEEEEcCCCeEEEEECCCCC
Confidence 67799999999999998643
No 49
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-35 Score=268.90 Aligned_cols=270 Identities=11% Similarity=0.072 Sum_probs=226.6
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe----EEEeeeCCCceeeEEEecCCC-eEE-EecCCeEEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK----CVEEYSLPNAASLVDFDFDES-KIV-GLIGTRICIW 177 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~-~l~-~~~~~~i~~w 177 (422)
....+|.+.|.+++| +++ +|++|+.||.|++||+.+++ ......+...+..++|+|++. .++ ++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 345689999999999 566 99999999999999998877 444444455677799999999 887 8899999999
Q ss_pred EC-CCCceeeecC--CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC---------cceeeeeecCCccEEEEEecCCC
Q 014590 178 RR-NGLRSVFPSR--EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS---------RKCSQIIRMHCAPVTSLSLSEDQ 245 (422)
Q Consensus 178 ~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~l~~~~~~ 245 (422)
|+ .++....... ....+..+++.+ +..+++++.|+.|++||+++ ++++..+. |...|.+++|+|+.
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR 162 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc
Confidence 99 8776433222 333344666666 78899999999999999988 77777776 88999999999877
Q ss_pred EEEEEcCCCcEEEEeCCC-Cccc---------cceEeEEEec-CCCEEEEEeCCCeEEEEECCCC------eeeeeeccC
Q 014590 246 LIISGSSLGSIAISGLSS-DQRL---------TGIKTLCYNP-CSRLVFAGTTAGYASCWDLRTM------KSLWETRIS 308 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~-~~~~---------~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~------~~~~~~~~~ 308 (422)
+++++.|+.|++||+++ +... ..+.+++|+| +++++++++.||.|++|+++.. +....+..|
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 99999999999999988 5432 6899999999 9999999999999999999876 777788888
Q ss_pred CC---------ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcc
Q 014590 309 PN---------VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCC 379 (422)
Q Consensus 309 ~~---------~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~ 379 (422)
.. .|.+++ |+|++++|++++.||.|++||+.+++.+..+..|
T Consensus 242 ~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---------------------------- 292 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF---------------------------- 292 (342)
T ss_dssp CCCTTCCSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC----------------------------
T ss_pred cccccccccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc----------------------------
Confidence 65 899999 9999999999999999999999999988877543
Q ss_pred cccCCCCCCCCeEEEEecCEEEEEEeCCCe-EEEEE
Q 014590 380 IDRIPKTIRPPITCLAVGMKKVVTTHNSKY-IRLWK 414 (422)
Q Consensus 380 ~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~-i~iW~ 414 (422)
|...|++++.++++|++|+.||. .+.|.
T Consensus 293 -------h~~~v~~~~~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 -------NEDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp -------SSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred -------cCCCceEecCCCCeEEEEecCCccccccc
Confidence 15688888877899999999999 55444
No 50
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=273.20 Aligned_cols=280 Identities=15% Similarity=0.191 Sum_probs=226.0
Q ss_pred eeeEEeeccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCCCeEEEeee--------------CCCceeeEEEec-CCC
Q 014590 103 IDIDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYS--------------LPNAASLVDFDF-DES 164 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~-~~~ 164 (422)
.....+.+|.+.|.+++| + ++ +|++|+.||.|++||+.+++....+. +...+..++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 456788899999999999 4 56 99999999999999999876554443 344567799999 666
Q ss_pred eEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCC---eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEE
Q 014590 165 KIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDP---EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (422)
Q Consensus 165 ~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~ 240 (422)
.++ ++.|+.|++||+.+++...............+.+.++ .+++++.|+.|++||+++++.+..+..|...|.+++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 777 8889999999999988654433444445666666554 699999999999999999999999999999999999
Q ss_pred ecCC-C-EEEEEcCCCcEEEEeCCCCcc---------------------c--cceEeEEEecCCCEEEEEeCCCeEEEEE
Q 014590 241 LSED-Q-LIISGSSLGSIAISGLSSDQR---------------------L--TGIKTLCYNPCSRLVFAGTTAGYASCWD 295 (422)
Q Consensus 241 ~~~~-~-~l~s~~~dg~i~iwd~~~~~~---------------------~--~~v~~~~~~~~~~~l~~g~~dg~i~iwd 295 (422)
|+|+ . ++++++.||.|++||++++.. . ..|.+++|+|++++|++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 9987 4 699999999999999987641 1 7899999999999999999999999999
Q ss_pred CCCCeeeeeeccCC-----CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeee
Q 014590 296 LRTMKSLWETRISP-----NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNE 370 (422)
Q Consensus 296 ~~~~~~~~~~~~~~-----~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~ 370 (422)
+.+++....+..+. ..+.... ....+..+++++.|+.|++||+.+++.+..+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-------------------- 332 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTV-SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG-------------------- 332 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEE-CCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--------------------
T ss_pred CCCCccceeccccccccccccceeEE-ecCCCceEEEEecCCEEEEEECcCCcceeeecc--------------------
Confidence 99887765544321 1111121 234455677788899999999999999888855
Q ss_pred ccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 371 GRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 371 ~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
|...|++++| ++++|++++.||.|++|++..++
T Consensus 333 ----------------~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 333 ----------------HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp ----------------CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred ----------------CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 4558999999 68999999999999999998765
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.8e-35 Score=285.52 Aligned_cols=309 Identities=13% Similarity=0.102 Sum_probs=234.8
Q ss_pred ceeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCCc----eeeEEEecC-CCeEE-EecCC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFD-ESKIV-GLIGT 172 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~-~~~l~-~~~~~ 172 (422)
+..+..+.+|.+.|.+++| +++ .+++++.|+.|++||+.+++.+..+..+.. +..++|+|+ ++.++ ++.|+
T Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 229 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR 229 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC
Confidence 3467889999999999999 455 799999999999999999999999987755 667999999 99988 88999
Q ss_pred eEEEEECCCCceeeec-----CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC----CccEEEEEecC
Q 014590 173 RICIWRRNGLRSVFPS-----REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH----CAPVTSLSLSE 243 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~l~~~~ 243 (422)
.|++||+.+++.+... .....+..+++. .+..+++++.|+.|++||+++++.+..+..+ ...+.++.+..
T Consensus 230 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 308 (615)
T ss_dssp CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEE
T ss_pred eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCC
Confidence 9999999988765433 233334455666 7777999999999999999998887777655 34566666654
Q ss_pred CCEEEEEcCCCcEEEEeCCCCccc-------c------------------------------------------------
Q 014590 244 DQLIISGSSLGSIAISGLSSDQRL-------T------------------------------------------------ 268 (422)
Q Consensus 244 ~~~l~s~~~dg~i~iwd~~~~~~~-------~------------------------------------------------ 268 (422)
++.+++++.||.|++||+.+++.+ .
T Consensus 309 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~ 388 (615)
T 1pgu_A 309 NGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSS 388 (615)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEE
T ss_pred CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEE
Confidence 466666666666666666543221 1
Q ss_pred -----------------------------------------------------------ceEeEEEecCCCEEEEEeC-C
Q 014590 269 -----------------------------------------------------------GIKTLCYNPCSRLVFAGTT-A 288 (422)
Q Consensus 269 -----------------------------------------------------------~v~~~~~~~~~~~l~~g~~-d 288 (422)
.+.+++|+ ++++++++. |
T Consensus 389 ~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d 466 (615)
T 1pgu_A 389 ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEG 466 (615)
T ss_dssp EETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTT
T ss_pred EeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCC
Confidence 12233333 566777777 8
Q ss_pred CeEEEEECCCCeee-eeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee-cCCccc----------
Q 014590 289 GYASCWDLRTMKSL-WETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM-DIGSAS---------- 356 (422)
Q Consensus 289 g~i~iwd~~~~~~~-~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-~~~~~~---------- 356 (422)
+.|++||+.+++.. ..+..|...|++++ |+|++++|++++.||.|++||+.+++.+..+.. |...+.
T Consensus 467 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSFDLKTPLRAKPSYIS-ISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 545 (615)
T ss_dssp SCEEEEETTEEEEEEECSSCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred CeEEEEECCCccccccccCCccCceEEEE-ECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccc
Confidence 88888888876555 66778999999999 999999999999999999999999988887766 555444
Q ss_pred ----------ccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 357 ----------SSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 357 ----------~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+++++.|+.|++|+.. ..........+|...|++++| +++ |++++.||.|++|+++.+
T Consensus 546 ~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 546 ANEEEIEEDLVATGSLDTNIFIYSVK---RPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESS---CTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred ccccccCCCEEEEEcCCCcEEEEECC---CCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 4444555566555443 331223334678999999999 688 999999999999998753
No 52
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.1e-34 Score=269.77 Aligned_cols=264 Identities=13% Similarity=0.173 Sum_probs=222.4
Q ss_pred ceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCC---CceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeec
Q 014590 114 GVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLP---NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 114 ~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~ 188 (422)
.+..|+|+ ++.|++|. |++|+|||..+|+++..+..+ ..+.+++|+|+|++|+ |+.|+.|++||+.+++.+..
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~- 184 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN- 184 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE-
Confidence 46678995 44777765 999999999999988877643 3467799999999999 99999999999998875532
Q ss_pred CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCcc
Q 014590 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR 266 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 266 (422)
..++...+.++..++..+++|+.|+.+++||.... ..+..+.+|...+..+.++|+ .++++++.|+.+++||..+++.
T Consensus 185 ~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 185 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 264 (420)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred EeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence 33444557788888889999999999999998764 456788999999999999986 8999999999999999987764
Q ss_pred c-----------cceEeEEEecCCC-EEEE--EeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe--c
Q 014590 267 L-----------TGIKTLCYNPCSR-LVFA--GTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG--I 330 (422)
Q Consensus 267 ~-----------~~v~~~~~~~~~~-~l~~--g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~--~ 330 (422)
. ..|.+++|+|++. .+++ |+.|+.|++||+.+++++..+..| ..+.++. |+++++.+++++ .
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~-~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSIL-WSPHYKELISGHGFA 342 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEE-EETTTTEEEEEECTT
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeee-ecCCCCeEEEEEecC
Confidence 3 7899999999764 5554 457999999999999999888766 5688888 899999888765 7
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
||.|+|||+.+++++.++.+ |.+.|++++| |+++|+|||.||
T Consensus 343 d~~I~iwd~~~~~~v~~l~g------------------------------------H~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKG------------------------------------HTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp TCCEEEEETTTCCEEEEECC------------------------------------CSSCEEEEEECTTSSCEEEEETTT
T ss_pred CCEEEEEECCCCcEEEEEcC------------------------------------CCCCEEEEEEcCCCCEEEEEecCC
Confidence 99999999999999988855 5568999999 689999999999
Q ss_pred eEEEEEccC
Q 014590 409 YIRLWKFNY 417 (422)
Q Consensus 409 ~i~iW~~~~ 417 (422)
+|+|||+..
T Consensus 387 tvriWdv~~ 395 (420)
T 4gga_A 387 TLRLWRCFE 395 (420)
T ss_dssp EEEEECCSC
T ss_pred eEEEEECCC
Confidence 999999864
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.4e-35 Score=267.25 Aligned_cols=269 Identities=11% Similarity=0.131 Sum_probs=207.3
Q ss_pred ccceeEEEe-cCC-eEEEEecCC-------eEEEEEcCCCe--------EEEeeeC-CCceeeEEEecCCCeEE-Ee---
Q 014590 112 SVGVDQCRM-KRG-LILTGVGDK-------VMRLWSLEGYK--------CVEEYSL-PNAASLVDFDFDESKIV-GL--- 169 (422)
Q Consensus 112 ~~~v~~v~~-~~~-~l~s~~~dg-------~v~iwd~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~l~-~~--- 169 (422)
.-+|++++| +|+ +|++|+.|. .|++|++..+. ....+.. .+...+++++++++.++ +.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 348999999 677 888887543 59999987542 1222222 22234456677777766 32
Q ss_pred --------cCCeEEEEECCCCceee---e-------cCCCceeeeEEEeeeCCeEE--EecCCCeEEEEeCCCcceeeee
Q 014590 170 --------IGTRICIWRRNGLRSVF---P-------SREGTFMKGLCMRYFDPEAV--VGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 170 --------~~~~i~~w~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
.|+.+++|++.+..... . ......+..+++++++..++ +++.|++|++||+++++++..+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 36789999986643211 1 01122355788888888865 5567999999999999998888
Q ss_pred ecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCC----eEEEEE
Q 014590 230 RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAG----YASCWD 295 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg----~i~iwd 295 (422)
. |.+.|.+++|+|+ +++++++. +.+.+|+..++... ..|.+++|+|+++++++++.|+ .+++|+
T Consensus 174 ~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 174 E-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp E-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred C-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 6 7788999999998 77777774 56667776666544 6799999999999999999887 688899
Q ss_pred CCCCee----eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeec
Q 014590 296 LRTMKS----LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEG 371 (422)
Q Consensus 296 ~~~~~~----~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~ 371 (422)
+..... ...+.+|...|++++ |+|+|++||+|+.|++|+|||+++++++..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~V~~~~-~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~---------------------- 308 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKGITSMD-VDMKGELAVLASNDNSIALVKLKDLSMSKIFK---------------------- 308 (365)
T ss_dssp EETTEEEEEEEEEEESSCSCEEEEE-ECTTSCEEEEEETTSCEEEEETTTTEEEEEET----------------------
T ss_pred cccceecceeeeeecCCCCCeEeEE-ECCCCCceEEEcCCCEEEEEECCCCcEEEEec----------------------
Confidence 876543 346778999999999 99999999999999999999999999887752
Q ss_pred cccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 372 RRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 372 ~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.+|...|++++| |+++|+|||.|++|+||+++..
T Consensus 309 -------------~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 309 -------------QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -------------TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -------------CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 357779999999 7999999999999999999653
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-35 Score=296.52 Aligned_cols=195 Identities=10% Similarity=0.050 Sum_probs=165.0
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCc
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
...||.+.|++++| +++ +||+|+.||+|+||+..+.+....+.+...+..++|+| +++|+ ++.|++|++||+.+++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 44699999999999 566 99999999999999999888877776666778899999 77777 8999999999999887
Q ss_pred eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee-----------eeeecCCccEEEEEecCC--CEEEEE
Q 014590 184 SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-----------QIIRMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
.+........+..+++.+++..+++|+.||.|++||+++++.. ..+.+|.++|.+++|+|+ +.+++|
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 5432222334556777778888999999999999999988753 234678999999999995 689999
Q ss_pred cCCCcEEEEeCCCCccc-------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 251 SSLGSIAISGLSSDQRL-------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
+.||.| +||+++++.+ ..|.+++|+|+|++|++|+.||.|++||+++++++.
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 999999 9999887643 249999999999999999999999999999887764
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-34 Score=263.42 Aligned_cols=239 Identities=19% Similarity=0.216 Sum_probs=196.0
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
+.....+.+|...|.+++| +++ ++++|+.|++|++||+.+++.+..+.+|.. +..++|+|+++.++ ++.|++|++|
T Consensus 66 ~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 66 GIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLW 145 (343)
T ss_dssp EEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEE
T ss_pred ccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEE
Confidence 3466789999999999999 556 999999999999999999999999987754 56699999999998 8999999999
Q ss_pred ECCCCceee-ecC--CCceeeeEEEeeeC----------CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC
Q 014590 178 RRNGLRSVF-PSR--EGTFMKGLCMRYFD----------PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED 244 (422)
Q Consensus 178 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 244 (422)
|+....... ... ....+..+++.+.+ +.+++++.|+.|++||. +++....+.+|...|.+++|+|+
T Consensus 146 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 146 NILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp ESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTT
T ss_pred eccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCC
Confidence 998544321 211 22233445555544 56999999999999994 56777888999999999999987
Q ss_pred -CEEEEEcCCCcEEEEeCCCCcc-c------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee--eec--------
Q 014590 245 -QLIISGSSLGSIAISGLSSDQR-L------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW--ETR-------- 306 (422)
Q Consensus 245 -~~l~s~~~dg~i~iwd~~~~~~-~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~~-------- 306 (422)
++|++|+.||.|++||+..... . ..|.+++|+|++.++++|+ |+.|++||+.+++... .+.
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 8999999999999999954332 2 6799999999999887665 6779999998765443 333
Q ss_pred ---cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 307 ---ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 307 ---~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
+|...|.+++ |+|+|++|++|+.||.|++|++.+++
T Consensus 304 ~~~~~~~~v~~~~-~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 304 GQKGKNPQCTSLA-WNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp TBCCSCCCEEEEE-ECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhcCCCCceEEEE-ECCCCCeEEEecCCceEEEEEEEccC
Confidence 6778899999 99999999999999999999987653
No 56
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-34 Score=268.35 Aligned_cols=228 Identities=18% Similarity=0.214 Sum_probs=195.2
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
.|.+++| +++ +|++|+.|++|++||+.+++.+..+.+|.. +..++|+|++..|+ ++.|++|++||+.+++......
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 5999999 566 999999999999999999999999988755 56699999999998 8999999999999887654333
Q ss_pred CCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeee-------ecCCccEEEEEecCC-CEEEEEcCCCcEEEEe
Q 014590 190 EGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQII-------RMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (422)
Q Consensus 190 ~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd 260 (422)
....+..+++.+ ++..+++|+.|+.|++||+++++.+..+ .+|...|.+++|+|+ +++++|+.|+.|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 333344566666 5667999999999999999999877766 578999999999987 8999999999999999
Q ss_pred CCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec-
Q 014590 261 LSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN- 320 (422)
Q Consensus 261 ~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~- 320 (422)
+++.... ..|.+++|+|++.+|++|+.|+.|++||+.+++++..+.+|...|.+++ +++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~-~~~~ 363 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA-VANG 363 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE-ECSS
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE-ecCC
Confidence 9764321 5689999999999999999999999999999999999999999999999 665
Q ss_pred -----CCCEEEEEecCCeEEEEECCCC
Q 014590 321 -----DTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 321 -----~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
++++|++|+.||+|++|++...
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred cCcCCCCCEEEEECCCCcEEECccccc
Confidence 6889999999999999998643
No 57
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=292.88 Aligned_cols=307 Identities=10% Similarity=0.041 Sum_probs=225.5
Q ss_pred eccccceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCcee-
Q 014590 109 KAHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV- 185 (422)
Q Consensus 109 ~~H~~~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~- 185 (422)
..|...|.+++|..| +|++++.|++|++||+.+++++..+..+..+..++|+|++++++ ++.||.|++||+.++...
T Consensus 55 ~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 55 LEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp CSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 458899999999547 89999999999999999999999998777788899999999999 999999999999987642
Q ss_pred e---------ecCCCce--eeeEEEeee-CCeEEEecCCCeEEEEeCCCcceeeeeecC------------------Ccc
Q 014590 186 F---------PSREGTF--MKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIRMH------------------CAP 235 (422)
Q Consensus 186 ~---------~~~~~~~--~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------------~~~ 235 (422)
+ ....++. +..+++.+. ...+++|+.|+.| +||+++++++..+..| ...
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 1 1112232 334455543 2459999999999 9999999988887765 578
Q ss_pred EEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------------------cceEeEEEec----CC-CEEEE
Q 014590 236 VTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------------------TGIKTLCYNP----CS-RLVFA 284 (422)
Q Consensus 236 v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------------~~v~~~~~~~----~~-~~l~~ 284 (422)
|.+++|+|+ .+|++|+.||.|++||+++++.+ ..|.+++|++ ++ .++++
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~s 293 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLIS 293 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEe
Confidence 999999987 89999999999999999876542 1588888853 32 34555
Q ss_pred EeC----------------------------------------------------------------------------C
Q 014590 285 GTT----------------------------------------------------------------------------A 288 (422)
Q Consensus 285 g~~----------------------------------------------------------------------------d 288 (422)
|+. |
T Consensus 294 g~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~d 373 (902)
T 2oaj_A 294 HKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGN 373 (902)
T ss_dssp EECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETT
T ss_pred CCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCC
Confidence 533 3
Q ss_pred CeEEEEECCCCeeeee-----------------------------------------eccCCCceeeeeeEecCCCEEEE
Q 014590 289 GYASCWDLRTMKSLWE-----------------------------------------TRISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 289 g~i~iwd~~~~~~~~~-----------------------------------------~~~~~~~v~~l~~~s~~~~~l~s 327 (422)
|.|++||+.++..... +.+|...+.+++ |+|++++|++
T Consensus 374 g~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~-~spdg~~laS 452 (902)
T 2oaj_A 374 GEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKL-PAEYGTAFIT 452 (902)
T ss_dssp SCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCC-CCSEEEEEEE
T ss_pred CcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccc-ccccCcEEEE
Confidence 4455555544422111 122333344455 6789999999
Q ss_pred EecCCeEEEEECCCCce---------------------EEEeeecCCcccccCCCCCCeEEeeeccccCC----------
Q 014590 328 GGIDGVLRVLDQNTGEV---------------------LSRCVMDIGSASSSSNKVSGVIERNEGRRLSA---------- 376 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~~---------------------~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~---------- 376 (422)
|+.||+|++||+.++.. +..+...++...+++++.||+|++|+......
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~ 532 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESG 532 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----------
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCc
Confidence 99999999999987642 12222333344678888888888876643210
Q ss_pred C-------------------------------cccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 377 G-------------------------------CCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 377 ~-------------------------------~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
. ........+|.+.|++++| || +|++|+.|++|++||++.+
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 0 0012233569999999999 68 9999999999999998664
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=252.81 Aligned_cols=265 Identities=14% Similarity=0.162 Sum_probs=219.8
Q ss_pred eeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCC---CceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC
Q 014590 115 VDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLP---NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 115 v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
..+|+|+ +++|++| .|++|+|||+.++++++.+..+ ..+..++|+|+++.++ ++.|++|++|++++++.+.. .
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~-~ 105 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN-M 105 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE-E
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE-e
Confidence 5779995 5577765 5999999999999999887643 2356799999999999 99999999999999875422 2
Q ss_pred CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc
Q 014590 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
.++.....++...+..+++++.++.+++|+...+ ..+..+.+|...+..+.+.++ +++++++.|+.|++||+++++..
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 3344456778888888999999999999998776 456778899999999999976 89999999999999999987643
Q ss_pred -----------cceEeEEEecCCCEE---EEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe--cC
Q 014590 268 -----------TGIKTLCYNPCSRLV---FAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG--ID 331 (422)
Q Consensus 268 -----------~~v~~~~~~~~~~~l---~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~--~d 331 (422)
..|.+++++|++..+ ++++.++.|++||.......... .+...+..+. ++|+++.+++++ .|
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~-~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSIL-WSPHYKELISGHGFAQ 263 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEE-EETTTTEEEEEECTTT
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeee-ecccccceEEEEEcCC
Confidence 778999999877533 45678899999999987776554 4557788888 889999877654 79
Q ss_pred CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCe
Q 014590 332 GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKY 409 (422)
Q Consensus 332 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~ 409 (422)
+.|++||+.+++++.++.+ |.+.|++++| ++++|+|||.||+
T Consensus 264 ~~i~iwd~~~~~~~~~l~g------------------------------------H~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELKG------------------------------------HTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp CCEEEEETTTCCEEEEECC------------------------------------CSSCEEEEEECTTSSCEEEEETTTE
T ss_pred CEEEEEECCCCcEEEEEcC------------------------------------CCCCEEEEEEcCCCCEEEEEecCCe
Confidence 9999999999999998855 5568999999 6899999999999
Q ss_pred EEEEEccCCC
Q 014590 410 IRLWKFNYSD 419 (422)
Q Consensus 410 i~iW~~~~~~ 419 (422)
|+|||+...+
T Consensus 308 v~iWd~~~~d 317 (318)
T 4ggc_A 308 LRLWRCFELD 317 (318)
T ss_dssp EEEECCSCCC
T ss_pred EEEEECCCCC
Confidence 9999986543
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-34 Score=305.40 Aligned_cols=315 Identities=17% Similarity=0.190 Sum_probs=248.7
Q ss_pred ceeeEEeeccccceeEEEe-c--CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-K--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRIC 175 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~ 175 (422)
+..+..+.+|...|.+++| + ++ ++++|+.||.|++||+.+++++..+.+|.. +..++|+|++..++ ++.||.|+
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence 3467788999999999999 3 33 899999999999999999999999887654 55699999999998 89999999
Q ss_pred EEECCCCceeeec--------------------------------------------------------CCCceeeeEEE
Q 014590 176 IWRRNGLRSVFPS--------------------------------------------------------REGTFMKGLCM 199 (422)
Q Consensus 176 ~w~~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~ 199 (422)
+||+.++...... .....+..+++
T Consensus 769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~ 848 (1249)
T 3sfz_A 769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF 848 (1249)
T ss_dssp EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE
T ss_pred EEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE
Confidence 9998765421100 11122345566
Q ss_pred eeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCcc------------
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR------------ 266 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~------------ 266 (422)
.+.+..+++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|+ ..+++++.||.|++||+.++..
T Consensus 849 sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 928 (1249)
T 3sfz_A 849 SPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDV 928 (1249)
T ss_dssp CSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeE
Confidence 677778999999999999999999999999999999999999987 7999999999999999753210
Q ss_pred ----------------------------c----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceee
Q 014590 267 ----------------------------L----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYS 314 (422)
Q Consensus 267 ----------------------------~----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 314 (422)
. ..+.+++|+|+++++++|+.+|.|++||+.+++....+.+|...|++
T Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~ 1008 (1249)
T 3sfz_A 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRH 1008 (1249)
T ss_dssp EEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCC
T ss_pred EEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEE
Confidence 0 56899999999999999999999999999999999999999999999
Q ss_pred eeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc---------cccCCCCCCeEEeeecc-------------
Q 014590 315 LQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA---------SSSSNKVSGVIERNEGR------------- 372 (422)
Q Consensus 315 l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~---------~~~~~s~d~~i~~~~~~------------- 372 (422)
++ |+|++++|++++.||.|++||+.+++.... ..|...+ .+++++.|+.+.+|+..
T Consensus 1009 l~-~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 1086 (1249)
T 3sfz_A 1009 IQ-FTADGKTLISSSEDSVIQVWNWQTGDYVFL-QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG 1086 (1249)
T ss_dssp EE-ECSSSSCEEEECSSSBEEEEETTTTEEECC-BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS
T ss_pred EE-ECCCCCEEEEEcCCCEEEEEECCCCceEEE-ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC
Confidence 99 999999999999999999999887654321 1222211 22333334433333221
Q ss_pred --------------------------ccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 373 --------------------------RLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 373 --------------------------~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
++.....+ ....+|...|++++| ++++|++|+.||.|++||+.+++
T Consensus 1087 ~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~-~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1087 TVLSCAISSDATKFSSTSADKTAKIWSFDLLSPL-HELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CCCCEEECSSSSSCEEECCSSCCCEECSSSSSCS-BCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECCCccee-eeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 11111111 223568999999999 68999999999999999998765
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.4e-35 Score=264.35 Aligned_cols=238 Identities=12% Similarity=0.145 Sum_probs=186.8
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe--EEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEEECC
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIWRRN 180 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w~~~ 180 (422)
..+.+|.+.|++++| ++| +|+||+.|++|+|||+.+++ .+..+.+|.. +..++|+++.
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~----------------- 69 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM----------------- 69 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG-----------------
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC-----------------
Confidence 356799999999999 566 99999999999999998875 4566666543 3335554310
Q ss_pred CCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC---CEEEEEcCCCc
Q 014590 181 GLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED---QLIISGSSLGS 255 (422)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg~ 255 (422)
.+..|++|+.|++|++||+++++ ....+.+|...|.+++|+|+ .++++|+.|++
T Consensus 70 ---------------------~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 70 ---------------------YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp ---------------------GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred ---------------------CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 13348899999999999998774 56677889999999999984 58999999999
Q ss_pred EEEEeCCCCcc---c-------cceEeEEEecC-----------------CCEEEEEeCCCeEEEEECCCC---eeeeee
Q 014590 256 IAISGLSSDQR---L-------TGIKTLCYNPC-----------------SRLVFAGTTAGYASCWDLRTM---KSLWET 305 (422)
Q Consensus 256 i~iwd~~~~~~---~-------~~v~~~~~~~~-----------------~~~l~~g~~dg~i~iwd~~~~---~~~~~~ 305 (422)
|++||++.+.. . ..+.+++|+|+ +++|++|+.|+.|++||++.. +++.++
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 99999987531 1 67889999997 478999999999999999754 467788
Q ss_pred ccCCCceeeeeeEecCC----CEEEEEecCCeEEEEECCCCce----EEEeeecCCcccccCCCCCCeEEeeeccccCCC
Q 014590 306 RISPNVVYSLQHLQNDT----STLVVGGIDGVLRVLDQNTGEV----LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAG 377 (422)
Q Consensus 306 ~~~~~~v~~l~~~s~~~----~~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~ 377 (422)
.+|...|.+++ |+|++ ++|++++.||+|++||+.+... ...+
T Consensus 209 ~~h~~~V~~v~-~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~----------------------------- 258 (316)
T 3bg1_A 209 EAHSDWVRDVA-WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL----------------------------- 258 (316)
T ss_dssp BCCSSCEEEEE-CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE-----------------------------
T ss_pred ccCCCceEEEE-ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh-----------------------------
Confidence 99999999999 99986 7999999999999999875321 1111
Q ss_pred cccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 378 CCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 378 ~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
..|...|.+++| ++++|++++.||+|++|+....
T Consensus 259 -------~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 259 -------HKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp -------EECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred -------hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 235578999999 6899999999999999998643
No 61
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-34 Score=262.62 Aligned_cols=235 Identities=20% Similarity=0.224 Sum_probs=201.7
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC------eEEEeeeCCC-ceeeEEEecCCCeEE-EecC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY------KCVEEYSLPN-AASLVDFDFDESKIV-GLIG 171 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~ 171 (422)
+.....+..|...|.+++| +++ ++++|+.|+.+++|++... .....+..|. .+..++|++++..++ ++.|
T Consensus 96 ~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D 175 (354)
T 2pbi_B 96 TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD 175 (354)
T ss_dssp CCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT
T ss_pred CCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC
Confidence 3456678889999999999 566 9999999999999998643 2234444443 456699999999888 9999
Q ss_pred CeEEEEECCCCcee--eecCCCceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CE
Q 014590 172 TRICIWRRNGLRSV--FPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL 246 (422)
Q Consensus 172 ~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~ 246 (422)
++|++||+++++.+ +..+... +..+++.+. +..+++|+.||.|++||+++++++..+.+|...|.+++|+|+ +.
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGAD-VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC-EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred CcEEEEeCCCCeEEEEEcCCCCC-eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCE
Confidence 99999999988754 4444433 334555553 457999999999999999999999999999999999999987 89
Q ss_pred EEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 247 IISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
+++|+.|++|++||++.++.+ ..+.+++|+|+++++++|+.|+.|++||+.+++.+..+.+|.+.|++++
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~- 333 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLR- 333 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE-
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEE-
Confidence 999999999999999887654 4688999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEecCCeEEEEE
Q 014590 318 LQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd 338 (422)
|+|++++|++|+.||+|++|+
T Consensus 334 ~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999996
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.2e-35 Score=266.23 Aligned_cols=237 Identities=13% Similarity=0.110 Sum_probs=188.6
Q ss_pred eEEeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEee----eCC-CceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 105 IDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEY----SLP-NAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
.....+|.+.|.+++| +++.+++++.||+|+|||+.+++..... ..| ..+..++|+|+++.|+ ++.|+.|++|
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3456689999999999 5678888999999999999988755332 233 4567799999999999 8999999999
Q ss_pred ECCCCcee--eecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeee--ecCCccEEEEEecCC--CEEEEE
Q 014590 178 RRNGLRSV--FPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQII--RMHCAPVTSLSLSED--QLIISG 250 (422)
Q Consensus 178 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~--~~l~s~ 250 (422)
|+.+++.+ +..+.+. +..+++.+.++ .+++++.|+.|++||++++++...+ ..|...+.+++|+|+ .++++|
T Consensus 167 d~~~~~~~~~~~~h~~~-v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSE-VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp ETTTTEEEEEECCCSSC-EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred ECCCCcEEEEEcCCCCC-EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 99988754 3344433 34555555554 4899999999999999998876655 356778999999985 689999
Q ss_pred cCCCcEEEEeCCCCccc-------cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEec-C
Q 014590 251 SSLGSIAISGLSSDQRL-------TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQN-D 321 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~-~ 321 (422)
+.|+.|++||+++++.+ ..|.+++|+|++ ++|++|+.|++|+|||+++++.+..+ +|.+.|++++ |+| +
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va-fsP~d 323 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA-WSPLD 323 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE-ECSSS
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE-EeCCC
Confidence 99999999999998876 789999999987 57999999999999999999887654 7999999999 998 7
Q ss_pred CCEEEEEecCCeEEEEECCCCce
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
+++|++++.||+|++|++.+...
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp TTEEEEEETTSCEEEEECC----
T ss_pred CCEEEEEcCCCeEEEEECCCCCc
Confidence 89999999999999999975433
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=265.06 Aligned_cols=299 Identities=10% Similarity=0.159 Sum_probs=221.1
Q ss_pred ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCe-----------EEEeeeCC-------------CceeeEEEecCC
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK-----------CVEEYSLP-------------NAASLVDFDFDE 163 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~-------------~~~~~~~~~~~~ 163 (422)
.|.+.|.+++| ++| +||+|+.||.|+|||+.+++ ....+.+| ..+..++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 36899999999 566 99999999999999999876 57778777 446679999998
Q ss_pred --CeEE-EecCCeEEEEECCCCcee-----------------------------------------eecCCCceeeeEEE
Q 014590 164 --SKIV-GLIGTRICIWRRNGLRSV-----------------------------------------FPSREGTFMKGLCM 199 (422)
Q Consensus 164 --~~l~-~~~~~~i~~w~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~ 199 (422)
..++ ++.|+.|++|++.++... +.......+..+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 6677 999999999998764321 11122233456677
Q ss_pred eeeCCeEEEecCCCeEEEEeCCC-cceee-------eeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCcc---
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYS-RKCSQ-------IIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQR--- 266 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~--- 266 (422)
.+++..+++| .|+.|++||+++ ++.+. .+.+|...|.+++|+|+ +++++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 7777789998 799999999984 44444 35689999999999986 6999999999999999998875
Q ss_pred -c-------c------------ceEeEEEecCCCEEEEEeCCCeEEEEECCC-CeeeeeeccCCCc--------------
Q 014590 267 -L-------T------------GIKTLCYNPCSRLVFAGTTAGYASCWDLRT-MKSLWETRISPNV-------------- 311 (422)
Q Consensus 267 -~-------~------------~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~-------------- 311 (422)
. . .|.+++|+|+|++|++++. +.|++||+++ ++++..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 2 2 8999999999999999999 9999999997 8888888888642
Q ss_pred -eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCC
Q 014590 312 -VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPP 390 (422)
Q Consensus 312 -v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~ 390 (422)
+..++ |+|++++|++|+.||.|++||+.+++.+ .+..+..............+... +...... .......+...
T Consensus 344 ~~~~~~-~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 418 (447)
T 3dw8_B 344 DKFECC-WNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCAS-GKRKKDE--ISVDSLDFNKK 418 (447)
T ss_dssp CCCCEE-ECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECS-SCCCTTC--EEGGGCCTTSC
T ss_pred cceEEE-ECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCcccccc-CCccccc--ccccccccCCc
Confidence 22377 9999999999999999999999988776 44444432211111111111100 0000000 11111234568
Q ss_pred eEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 391 ITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 391 v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
|.+++| ++++|++++.|+ +.+|...
T Consensus 419 i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 419 ILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred eeEEEECCCCCEEEEEecce-eeeeccc
Confidence 999999 688999998886 7777643
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9e-34 Score=260.13 Aligned_cols=276 Identities=12% Similarity=0.141 Sum_probs=225.1
Q ss_pred ceeeEEeeccccceeEEEe-cC---C-eEEEEecCCeEEEEEcCC-CeEE-EeeeCCC-ceeeEEEecCCCeEE-EecCC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KR---G-LILTGVGDKVMRLWSLEG-YKCV-EEYSLPN-AASLVDFDFDESKIV-GLIGT 172 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~---~-~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~l~-~~~~~ 172 (422)
...+..+.+|.+.|++++| ++ | +|++|+.||.|++||+.+ ++.+ ..+..|. .+..++|+|+++.|+ ++.|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 3467789999999999999 45 5 999999999999999987 5554 6666554 456799999999998 88999
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEE--eeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEE
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCM--RYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISG 250 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~ 250 (422)
.|++||+.+++..........+..+++ .+.+..+++++.||.|++||+++++.+..+..+. .+.++.+.+ ..++++
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 186 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY-PMAVVA 186 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET-TEEEEE
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC-CeeEEE
Confidence 999999999886543333344455666 4455669999999999999999999998888664 566777654 477888
Q ss_pred cCCCcEEEEeCCCCccc---------cceEeEEEecCCCE----EEEEeCCCeEEEEECCCC---eeeeeeccCCC----
Q 014590 251 SSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRL----VFAGTTAGYASCWDLRTM---KSLWETRISPN---- 310 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~----l~~g~~dg~i~iwd~~~~---~~~~~~~~~~~---- 310 (422)
+.++.+.+|+++..... ..+.++++.++... +++++.||.|++||++.. ..+..+.+|..
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 88999999999876443 55677777766654 999999999999999987 55677777765
Q ss_pred --------ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccccc
Q 014590 311 --------VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDR 382 (422)
Q Consensus 311 --------~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~ 382 (422)
.|++++ |+|++++|++|+.||.|++||+.+++++..+..
T Consensus 267 ~~~~~~~~~v~~~~-~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------------------- 313 (368)
T 3mmy_A 267 TSAPQDIYAVNGIA-FHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-------------------------------- 313 (368)
T ss_dssp -CCCEEECCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--------------------------------
T ss_pred ccccccccceEEEE-EecCCCEEEEEccCCeEEEEECCCCcEEEEecC--------------------------------
Confidence 699999 999999999999999999999999988887754
Q ss_pred CCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 383 IPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 383 ~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
|...|++++| ++++|++++.|+..+.|++-
T Consensus 314 ----~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 314 ----LDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ----CSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred ----CCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 4568999999 68999999999876666643
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.4e-34 Score=280.50 Aligned_cols=258 Identities=14% Similarity=0.140 Sum_probs=219.1
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC----eEEEeeeCCCc--eeeEEEec--CCCeEE-EecCCeEEEE
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNA--ASLVDFDF--DESKIV-GLIGTRICIW 177 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~--~~~~~~~~--~~~~l~-~~~~~~i~~w 177 (422)
..|.+.|.+++| +++ +|++++ ++.|++||+.++ +....+.+|.. +..++|+| +++.|+ ++.|+.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 368999999999 566 888887 899999999998 88888987754 56799999 999999 8899999999
Q ss_pred ECCCC--------ce--eeecCCCceeeeEEEeeeCCeEEEecCC----CeEEEEeCCCcceeeeeecCCccEEEEEecC
Q 014590 178 RRNGL--------RS--VFPSREGTFMKGLCMRYFDPEAVVGCED----GTARVFDMYSRKCSQIIRMHCAPVTSLSLSE 243 (422)
Q Consensus 178 ~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 243 (422)
|+.++ .. .+..+. ..+..+++.+++..+++++.+ +.|.+|| .++.+..+.+|...|.+++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLA-GPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCS-SCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred eCCCCcccccccccccchhhccc-ccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 99754 22 233333 345567778888889999887 7888988 6778888999999999999998
Q ss_pred C-C-EEEEEcCCCcEEEEeCCCCccc-------c---ceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeee-c---
Q 014590 244 D-Q-LIISGSSLGSIAISGLSSDQRL-------T---GIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWET-R--- 306 (422)
Q Consensus 244 ~-~-~l~s~~~dg~i~iwd~~~~~~~-------~---~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~-~--- 306 (422)
+ . .+++++.|+.|++||+.+++.+ . .|.+++|+|+ ++++++++.||.|++||+++++.+..+ .
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 250 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE 250 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccc
Confidence 7 3 8999999999999999888765 4 7999999999 999999999999999999999999988 6
Q ss_pred cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC-------------CcccccCCCCCCeEEeeecc
Q 014590 307 ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI-------------GSASSSSNKVSGVIERNEGR 372 (422)
Q Consensus 307 ~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~-------------~~~~~~~~s~d~~i~~~~~~ 372 (422)
.|...|.+++ |+ ++++|++++.||.|++||+.+++.+..+..+. ....+++++.|+.+.+++..
T Consensus 251 ~~~~~v~~~~-~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 251 PVQGGIFALS-WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp CCCSCEEEEE-ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred ccCCceEEEE-Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 8999999999 88 99999999999999999999999988887763 12256677788888776543
No 66
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-34 Score=265.66 Aligned_cols=256 Identities=16% Similarity=0.227 Sum_probs=214.4
Q ss_pred eEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEE
Q 014590 133 VMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVV 208 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ 208 (422)
.+..|+..+..+..++.+|.. +..++|+|+++.|+ ++.|++|++||..+++.. +..+... +..+++.+++..+++
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~-v~~~~~s~~g~~las 125 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW-VMECAFAPNGQSVAC 125 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT-CCCCEECTTSSEEEE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC-EEEEEECCCCCEEEE
Confidence 344577777888889988765 56699999999999 999999999999887744 4444433 456778888889999
Q ss_pred ecCCCeEEEEeCCCcc-------eeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc------------
Q 014590 209 GCEDGTARVFDMYSRK-------CSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL------------ 267 (422)
Q Consensus 209 ~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~------------ 267 (422)
|+.|+.|++||+.+.. ....+.+|.+.|.++.|.|+ ..+++|+.|++|++||+++++.+
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999999986532 34567899999999999975 57999999999999999988754
Q ss_pred cceEeEEEec-CCCEEEEEeCCCeEEEEECC-CCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 268 TGIKTLCYNP-CSRLVFAGTTAGYASCWDLR-TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 268 ~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
..|.+++++| +++++++|+.|+.|++||++ .++.+..+.+|.+.|++++ |+|++++|++|+.||+|++||+++++.+
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~-~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK-FFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE-ECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE-EecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 5789999977 88999999999999999998 4578888999999999999 9999999999999999999999999988
Q ss_pred EEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 346 SRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+..+... ...+...|++++| ++.+|++|+.||.|++||+..++
T Consensus 285 ~~~~~~~~~-----------------------------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 285 QVYNREPDR-----------------------------NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EEECCCCSS-----------------------------SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred EEecccccc-----------------------------cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 887654330 1123456899999 68999999999999999986554
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-34 Score=262.00 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=199.7
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcC--CCeEEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w 177 (422)
..+..+.+|.+.|.+++| +++ +|++|+.||.|++||+. +++.+..+..|.. +..++|+++.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-------------- 67 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-------------- 67 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG--------------
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC--------------
Confidence 456789999999999999 566 99999999999999998 5566667766543 3345555431
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC---CEEEEEcC
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED---QLIISGSS 252 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~---~~l~s~~~ 252 (422)
.+..+++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ .++++++.
T Consensus 68 ------------------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 68 ------------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp ------------------------GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ------------------------CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 13348888999999999998886 67778889999999999975 69999999
Q ss_pred CCcEEEEeCCCCccc---------cceEeEEEec-------------CCCEEEEEeCCCeEEEEECCCCe----eeeeec
Q 014590 253 LGSIAISGLSSDQRL---------TGIKTLCYNP-------------CSRLVFAGTTAGYASCWDLRTMK----SLWETR 306 (422)
Q Consensus 253 dg~i~iwd~~~~~~~---------~~v~~~~~~~-------------~~~~l~~g~~dg~i~iwd~~~~~----~~~~~~ 306 (422)
|+.|++||++++... ..|.+++|+| ++.++++|+.||.|++||++++. ....+.
T Consensus 124 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 203 (379)
T 3jrp_A 124 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 203 (379)
T ss_dssp TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe
Confidence 999999999887433 7899999999 69999999999999999998653 456788
Q ss_pred cCCCceeeeeeEecC---CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccC
Q 014590 307 ISPNVVYSLQHLQND---TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRI 383 (422)
Q Consensus 307 ~~~~~v~~l~~~s~~---~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~ 383 (422)
+|...|.+++ |+|+ +++|++++.||.|++||+.++..........
T Consensus 204 ~h~~~v~~~~-~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------- 251 (379)
T 3jrp_A 204 GHSDWVRDVA-WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLK------------------------------- 251 (379)
T ss_dssp CCSSCEEEEE-ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS-------------------------------
T ss_pred cccCcEeEEE-ECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeec-------------------------------
Confidence 8999999999 9999 8999999999999999998765321111100
Q ss_pred CCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 384 PKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 384 ~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...|...|++++| ++++|++++.||.|++|++..+
T Consensus 252 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 252 EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 1346778999999 6899999999999999998743
No 68
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.6e-33 Score=254.80 Aligned_cols=273 Identities=10% Similarity=0.070 Sum_probs=197.9
Q ss_pred EEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC----eEEEeeeCCCc-eeeEEEec--CCCeEEEecCCeEEE
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNA-ASLVDFDF--DESKIVGLIGTRICI 176 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~-~~~~~~~~--~~~~l~~~~~~~i~~ 176 (422)
..+.||.+.|++++| +++ +|++|+.||.|++||+.++ +....+..|.. +..++|+| ++..
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~----------- 73 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRI----------- 73 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSE-----------
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCE-----------
Confidence 467899999999999 566 9999999999999999876 45566665533 44466665 3444
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc---------ceeeeeecCCccEEEEEecC---C
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR---------KCSQIIRMHCAPVTSLSLSE---D 244 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~v~~l~~~~---~ 244 (422)
|++|+.||.|++||++++ +.+..+..|...|.+++|+| +
T Consensus 74 -----------------------------l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 124 (351)
T 3f3f_A 74 -----------------------------IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG 124 (351)
T ss_dssp -----------------------------EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred -----------------------------EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC
Confidence 666677777777777655 45777788999999999997 4
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc--------------------cceEeEEEecC---CCEEEEEeCCCeEEEEECCCCee
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL--------------------TGIKTLCYNPC---SRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~--------------------~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
.++++++.||.|++||+++++.+ ..+.+++|+|+ +.++++++.++.+.+|+...++.
T Consensus 125 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 125 LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 68999999999999999887643 67899999997 89999999999998888877654
Q ss_pred --eeeeccCCCceeeeeeEecCC----CEEEEEecCCeEEEEECCCCceEEEeeecCCccc----------ccCCCCCCe
Q 014590 302 --LWETRISPNVVYSLQHLQNDT----STLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSAS----------SSSNKVSGV 365 (422)
Q Consensus 302 --~~~~~~~~~~v~~l~~~s~~~----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~----------~~~~s~d~~ 365 (422)
+..+.+|...|++++ |+|++ ++|++|+.||.|++||+.++........+..... ...+..++.
T Consensus 205 ~~~~~~~~h~~~i~~~~-~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSIS-WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSN 283 (351)
T ss_dssp EEEEECCCCCSCEEEEE-ECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred eeeeecCCCCcceeEEE-ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccc
Confidence 677888999999999 99998 8999999999999999987654433322222111 111111111
Q ss_pred EE-eeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 366 IE-RNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 366 i~-~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
.. ....+.... ........+|...|++++| ++++|++|+.||.|++|++..+++
T Consensus 284 ~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 284 TEEKAELQSNLQ-VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp -------CCSEE-EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred cceeeeeccccc-ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 10 001111111 1112223578899999999 689999999999999999988754
No 69
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=256.07 Aligned_cols=256 Identities=12% Similarity=0.114 Sum_probs=201.6
Q ss_pred CeEEEeeeCCCc--eeeEEEecCCCeEE-EecCCeEEEEECCCCcee----eecCCCceeeeEEEeeeCCeEEEecCCCe
Q 014590 142 YKCVEEYSLPNA--ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV----FPSREGTFMKGLCMRYFDPEAVVGCEDGT 214 (422)
Q Consensus 142 ~~~~~~~~~~~~--~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 214 (422)
.+++.++.+|.. +..++|+|+++.|+ ++.|++|++||+.++... ........+..+++++++..|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356677777654 56799999999999 899999999999887532 11222233456777778888999999999
Q ss_pred EEEEeCCCc--ceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCE
Q 014590 215 ARVFDMYSR--KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRL 281 (422)
Q Consensus 215 i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~ 281 (422)
|++||..++ +++..+.+|...|.+++|+|+ ++|++|+.|++|++||++++... ..|.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 999998776 467788999999999999987 89999999999999999876432 67999999999999
Q ss_pred EEEEeCCCeEEEEECCCCe--eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccC
Q 014590 282 VFAGTTAGYASCWDLRTMK--SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSS 359 (422)
Q Consensus 282 l~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 359 (422)
|++|+.|+.|++||.++++ +..++.+|...|++++ |+|++++|++|+.||+|++||.........+ ..
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~-~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~---------~~ 234 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLA-FDPSGQRLASCSDDRTVRIWRQYLPGNEQGV---------AC 234 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEEEECTTCTTCC---------CC
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEE-ECCCCCEEEEEeCCCeEEEeccccCCCCccc---------ee
Confidence 9999999999999998775 4568899999999999 9999999999999999999996432111000 00
Q ss_pred CCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 360 NKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 360 ~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...+... .++..+...|...|.+++| ++..|++++.|+.|++|+...+
T Consensus 235 ~~~~~~~-----------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 235 SGSDPSW-----------KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp C---CEE-----------EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred eccCCcc-----------ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 0001000 0112223458889999999 5889999999999999998654
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.5e-33 Score=250.56 Aligned_cols=270 Identities=14% Similarity=0.162 Sum_probs=222.9
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC-eEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCcee--
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY-KCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-- 185 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-- 185 (422)
|.++|.+++| ++| +++++..++.+.+|+.... +.+..+.+...+..++|+|+++.++++.++.|++|++.++...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~ 87 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSP 87 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceee
Confidence 5678999999 577 7878877777777765543 4444454455677799999999999555999999999876422
Q ss_pred ---ee-cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEE
Q 014590 186 ---FP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAI 258 (422)
Q Consensus 186 ---~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~i 258 (422)
+. ......+..+++.+++..+++++.|+.|++||+.+++ ....+..|...|.+++|+|+ +++++++.||.|++
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~ 167 (337)
T 1gxr_A 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167 (337)
T ss_dssp SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 11 1233445567777777889999999999999999887 66777889999999999987 89999999999999
Q ss_pred EeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 259 SGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 259 wd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
||+++++.. ..+.+++|+|+++++++++.||.|++||+++++.+..+. +...+.+++ |+|++++|++++.|
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~-~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLG-YCPTGEWLAVGMES 245 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE-ECTTSSEEEEEETT
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEE-ECCCCCEEEEEcCC
Confidence 999988765 789999999999999999999999999999998887764 667899999 99999999999999
Q ss_pred CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCe
Q 014590 332 GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKY 409 (422)
Q Consensus 332 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~ 409 (422)
|.|++||+.+++.. .+ ..|...|.+++| ++++|++++.||.
T Consensus 246 ~~i~~~~~~~~~~~-~~------------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 246 SNVEVLHVNKPDKY-QL------------------------------------HLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp SCEEEEETTSSCEE-EE------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CcEEEEECCCCCeE-EE------------------------------------cCCccceeEEEECCCCCEEEEecCCCc
Confidence 99999999877643 22 235668999999 5899999999999
Q ss_pred EEEEEccCCC
Q 014590 410 IRLWKFNYSD 419 (422)
Q Consensus 410 i~iW~~~~~~ 419 (422)
|++|++..++
T Consensus 289 i~~~~~~~~~ 298 (337)
T 1gxr_A 289 LNAWRTPYGA 298 (337)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCe
Confidence 9999998765
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-32 Score=245.66 Aligned_cols=243 Identities=18% Similarity=0.239 Sum_probs=203.7
Q ss_pred CeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEE
Q 014590 142 YKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARV 217 (422)
Q Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 217 (422)
.....++.+|. .+..++|+|+++.++ ++.|+.|++|+..+++.. +..+.. .+..+++.++++.+++|+.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-ceEEEEEcCCCCEEEEECCCCEEEE
Confidence 34556666664 456699999999998 899999999999877643 333333 3456777778888999999999999
Q ss_pred EeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCC
Q 014590 218 FDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAG 289 (422)
Q Consensus 218 wd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg 289 (422)
||+++++.+..+.+|...|.+++|+|+ +++++|+.|+.|++||+++++.+ ..|.+++|+|+++++++|+.||
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999999999987 89999999999999999988765 7899999999999999999999
Q ss_pred eEEEEECCCCeeeeeec-cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEe
Q 014590 290 YASCWDLRTMKSLWETR-ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIER 368 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~ 368 (422)
.|++||+++++.+..+. .+...+..++ |+|++++|++++.||.|++||+.+++++..+..|....
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------- 237 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK------------- 237 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEE-ECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS-------------
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEE-ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce-------------
Confidence 99999999988877664 4557789998 99999999999999999999999999888886654410
Q ss_pred eeccccCCCcccccCCCCCCCCeEE-EEe-cCEEEEEEeCCCeEEEEEccCCC
Q 014590 369 NEGRRLSAGCCIDRIPKTIRPPITC-LAV-GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~h~~~v~~-i~~-~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+.. ... ++.+|++|+.||.|++||+..++
T Consensus 238 --------------------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 238 --------------------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp --------------------SCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred --------------------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 11222 222 57899999999999999998764
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-33 Score=264.22 Aligned_cols=261 Identities=13% Similarity=0.094 Sum_probs=214.5
Q ss_pred eeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC
Q 014590 155 SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC 233 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 233 (422)
..++|+|+++.++ ++.|+.+++||+.+.................+.+++..+++|+.||.|++||+.+++....+.+|.
T Consensus 60 ~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp TTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred cceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence 3589999999998 889999999999887654333333444455666777789999999999999999999988888999
Q ss_pred ccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 234 APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 234 ~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
+.|.+++|+|+ +++++++.|+.|++||+.+++.+ ..|.+++|+|++++|++++.||.|++||+++++.+..+
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 99999999987 79999999999999999988766 78999999999999999999999999999999998888
Q ss_pred ccC---C---------------------CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee-cCCcc-----
Q 014590 306 RIS---P---------------------NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM-DIGSA----- 355 (422)
Q Consensus 306 ~~~---~---------------------~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-~~~~~----- 355 (422)
..| . ..+.+++ |+|++++|++|+.||.|++||+++++.+..+.. |...+
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE-FGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceE-EcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE
Confidence 753 2 3445555 688999999999999999999999887776654 33322
Q ss_pred ------cccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccCC
Q 014590 356 ------SSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 356 ------~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.+++++.||.+.+|+...... .+..+..+|...|+++.+ ++++|++++.||.|++|++..+
T Consensus 299 ~~~~~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 299 DGNNANYIYAGYENGMLAQWDLRSPEC--PVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCcC--chhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 567777788887766543221 234444557889999988 7899999999999999998874
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-32 Score=259.82 Aligned_cols=269 Identities=20% Similarity=0.333 Sum_probs=227.2
Q ss_pred CCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEe
Q 014590 141 GYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFD 219 (422)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 219 (422)
..+....+.+|......+++++++.++ ++.||.|++||+.+++.+.. ..++...+.++.+.++.+++|+.||+|++||
T Consensus 107 ~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 107 ELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT-LVGHTGGVWSSQMRDNIIISGSTDRTLKVWN 185 (445)
T ss_dssp CCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE-CCCCSSCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred CcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEE-EcCCCCCEEEEEecCCEEEEEeCCCeEEEEE
Confidence 334456677777655567888899998 99999999999998875422 2234444667777788899999999999999
Q ss_pred CCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEE
Q 014590 220 MYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYAS 292 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~ 292 (422)
+.+++.+..+.+|...|.++.++ ++.+++|+.||.|++||+.+++.+ ..|.++++ +++++++|+.||.|+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 262 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred CCcCcEEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence 99999999999999999999995 468999999999999999988766 78888888 788999999999999
Q ss_pred EEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcc--------cccCCCCCC
Q 014590 293 CWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSA--------SSSSNKVSG 364 (422)
Q Consensus 293 iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~--------~~~~~s~d~ 364 (422)
+||+++++.+.++.+|...|.++. + ++.++++|+.||.|++||+.+++++..+..|...+ .+++++.||
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~-~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 339 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQ-F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS 339 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEE-E--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTS
T ss_pred EEECCCCcEeEEecCCCCceEEEE-E--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCC
Confidence 999999999999999999999998 6 88999999999999999999999999988776644 567888999
Q ss_pred eEEeeeccccCCCcccccC--CCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccCCC
Q 014590 365 VIERNEGRRLSAGCCIDRI--PKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~--~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.+.+|+... ...+..+ ...|...|++++|++++|++|+.||.|++||+..++
T Consensus 340 ~i~vwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 340 TVKIWDIKT---GQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp CEEEEETTT---CCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred eEEEEECCC---CcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc
Confidence 998876533 2223332 235889999999999999999999999999998765
No 74
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.6e-32 Score=248.55 Aligned_cols=294 Identities=15% Similarity=0.064 Sum_probs=207.1
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWR 178 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~ 178 (422)
..+.++.+|.+.|.+++| +|| +|++|+.| .+++||..+++.......+ ....+++.++++.++ ++.+++|++||
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 345577899999999999 577 88888766 5789999988777665543 466788999988875 66778999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-ceeeeeecCCccEEEEEecCCCEEEE--EcCCCc
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-KCSQIIRMHCAPVTSLSLSEDQLIIS--GSSLGS 255 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~~~l~s--~~~dg~ 255 (422)
..+++.+....... .+.++......++++ .++.|++||+.++ +.+..+.. +...+++++ +.++. |+.||.
T Consensus 88 ~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~ 160 (355)
T 3vu4_A 88 DVKKQDVSRIKVDA--PVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQ 160 (355)
T ss_dssp TTTTEEEEEEECSS--CEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTC
T ss_pred CCCCcEEEEEECCC--ceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcE
Confidence 99887654332222 345555555555554 4789999999988 77766654 444555666 55555 689999
Q ss_pred EEEEeCCCCc-----------------cc------cceEeEEEecCCCEEEEEeCCCe-EEEEECCCCeeeeeec-c-CC
Q 014590 256 IAISGLSSDQ-----------------RL------TGIKTLCYNPCSRLVFAGTTAGY-ASCWDLRTMKSLWETR-I-SP 309 (422)
Q Consensus 256 i~iwd~~~~~-----------------~~------~~v~~~~~~~~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~-~-~~ 309 (422)
|++||+.++. .. ..|.+++|+|+|++|++|+.|++ |++||+++++++.++. + |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999999765 11 78999999999999999999998 9999999999999998 5 99
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCC
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRP 389 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~ 389 (422)
..|++++ |+|++++|++++.|++|++||+..+........... . . ....+ ..+. .....+...+..
T Consensus 241 ~~v~~~~-~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~-~-~-~~~~~------~~~~----~~~~~~~~~~~~ 306 (355)
T 3vu4_A 241 ADVVDMK-WSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGW-I-N-MKYFQ------SEWS----LCNFKLSVDKHV 306 (355)
T ss_dssp SCEEEEE-ECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTT-E-E-CCCCC------CSSC----SEEEECCCCTTC
T ss_pred CcEEEEE-ECCCCCEEEEEECCCEEEEEEccCCCCcccccccce-e-e-ccccc------cccc----eeEEEeccCCCC
Confidence 9999999 999999999999999999999986532111100000 0 0 00000 0000 001111222334
Q ss_pred CeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 390 PITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 390 ~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
....++| ++++|++++.||.+++|++..++
T Consensus 307 ~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 307 RGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred CceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 4567888 78999999999999999987644
No 75
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=248.64 Aligned_cols=248 Identities=13% Similarity=0.120 Sum_probs=189.7
Q ss_pred CCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEECCCCc--ee--e-ecCCCceeeeEEEeeeCCeEEEecCCC
Q 014590 141 GYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLR--SV--F-PSREGTFMKGLCMRYFDPEAVVGCEDG 213 (422)
Q Consensus 141 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~--~~--~-~~~~~~~~~~~~~~~~~~~l~~~~~d~ 213 (422)
+.+++..+.+|.. +..++|+++ .|+ ++.|++|++||+.++. .. + .......+..++++++++.|++|+.|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 4567778887754 455888877 777 8999999999998753 22 2 121233455677777888899999999
Q ss_pred eEEEEeCCC-------cceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCC-c---cc-------cceEeEE
Q 014590 214 TARVFDMYS-------RKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD-Q---RL-------TGIKTLC 274 (422)
Q Consensus 214 ~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~-~---~~-------~~v~~~~ 274 (422)
+|++||++. .+.+..+.+|...|.+++|+|+ ++|++|+.|++|++||++.. . .+ ..|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999999853 3466778899999999999987 89999999999999999532 1 11 7799999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCC--eeeeeeccCCCceeeeeeEecC--CCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTM--KSLWETRISPNVVYSLQHLQND--TSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
|+|++.+|++|+.|+.|++||..++ +++..+.+|.+.|.+++ |+|+ +.+|++|+.|++|++||+.++.......
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~- 238 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD-FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE- 238 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE-ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE-
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE-ecCCCCeeEEEEEeCCCeEEEEEecCCCccccce-
Confidence 9999999999999999999998866 67888999999999999 9998 6789999999999999986432100000
Q ss_pred cCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccCC
Q 014590 351 DIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 351 ~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
. .....+...|...|.+++| ++.+|++++.||+|++|+...+
T Consensus 239 ---------------~-----------~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 239 ---------------W-----------VCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp ---------------E-----------EEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETT
T ss_pred ---------------e-----------EEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC
Confidence 0 0011122347889999999 4678999999999999998654
No 76
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.9e-32 Score=246.07 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=200.9
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
....+.+++|.+.|.+++| +++ +|++|+.|+.|++|+............+.. .....+++++..++ ++.|+.+++|
T Consensus 76 ~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~ 155 (340)
T 4aow_A 76 GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 155 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEE
Confidence 3467789999999999999 566 999999999999999999888877776544 45588899999988 8999999999
Q ss_pred ECCCCceeeecCCCc--eeeeEEEeeeCC--eEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 178 RRNGLRSVFPSREGT--FMKGLCMRYFDP--EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
|............++ .+...++...+. .+++++.|+.|++||+++++.+..+.+|.++|.+++|+|+ +++++|+.
T Consensus 156 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp CTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 998776543333332 233445544443 3789999999999999999999999999999999999987 89999999
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee---------ccCCCceeeeee
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET---------RISPNVVYSLQH 317 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~---------~~~~~~v~~l~~ 317 (422)
||.|++||+++++.+ ..+.+++|+|++.++ +++.|+.|++||++++..+..+ .+|...|++++
T Consensus 236 Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~- 313 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA- 313 (340)
T ss_dssp TCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEE-
T ss_pred CCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEE-
Confidence 999999999988876 789999999988655 5556999999999987766554 35788999999
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCc
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
|+|++++|++|+.||.|+|||+++|+
T Consensus 314 ~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 314 WSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999999885
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.7e-32 Score=256.62 Aligned_cols=251 Identities=18% Similarity=0.266 Sum_probs=212.1
Q ss_pred cceeeEEeeccccceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEec--CCCeEE-EecCCeEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDF--DESKIV-GLIGTRIC 175 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~l~-~~~~~~i~ 175 (422)
.+..+..+.+|.+.|.+++|. ++++++|+.||+|++||+.+++.+..+..|. .+..+++++ ++..++ ++.|+.|+
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred CCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 345678899999999999995 5599999999999999999999999998764 455688884 667777 99999999
Q ss_pred EEECCCCcee----------------------eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC
Q 014590 176 IWRRNGLRSV----------------------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC 233 (422)
Q Consensus 176 ~w~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 233 (422)
+||+.+.... .....++...+.++.+.++.+++|+.|+.|++||+++++++..+.+|.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 9999876532 223344555677788889999999999999999999999999999999
Q ss_pred ccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee
Q 014590 234 APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 234 ~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
..|.+++|+|+ +.+++|+.||.|++||+++++.+ ..|.+++++ +.++++|+.||.|++||+.+++.....
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 99999999987 89999999999999999988876 788999986 679999999999999999988766555
Q ss_pred ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE-eeecCCccc
Q 014590 306 RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR-CVMDIGSAS 356 (422)
Q Consensus 306 ~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~~ 356 (422)
. |...+..++ +++++++|++|+ ||.|++||+.+++.+.. +..+...+.
T Consensus 389 ~-~~~~~~~~~-~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~ 437 (464)
T 3v7d_B 389 H-HTNLSAITT-FYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIW 437 (464)
T ss_dssp E-CTTCCCEEE-EEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEE
T ss_pred c-CCCCccEEE-EEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEE
Confidence 3 556677777 899999999998 99999999999998876 444444443
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=250.87 Aligned_cols=247 Identities=15% Similarity=0.192 Sum_probs=216.4
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC-----C
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG-----T 172 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-----~ 172 (422)
.+..+..+.+|.+.|.+++| +++ +|++++.||.|++||+.+++.+..+.....+..++|+|++..++ ++.+ +
T Consensus 63 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 63 NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 34677889999999999999 566 99999999999999999999999999777788899999999998 7777 9
Q ss_pred eEEEEECCCCcee-------------eecCCC-ceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-cceeeeeecCCccEE
Q 014590 173 RICIWRRNGLRSV-------------FPSREG-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKCSQIIRMHCAPVT 237 (422)
Q Consensus 173 ~i~~w~~~~~~~~-------------~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~ 237 (422)
.|.+||+...... +..+.+ .....+++.+.+..+++++.||.|++||+++ ++.+..+..|...|.
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 9999998765321 111111 1455677777888899999999999999998 788889999999999
Q ss_pred EEEecCC-CEEEEEcCCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCC--------------eEEEEEC
Q 014590 238 SLSLSED-QLIISGSSLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAG--------------YASCWDL 296 (422)
Q Consensus 238 ~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg--------------~i~iwd~ 296 (422)
+++|+|+ .++++++.|+.|++||+++++.+ ..+.+++|+|+++++++++.++ .+++||.
T Consensus 223 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 9999987 89999999999999999998876 7899999999999999999988 8999999
Q ss_pred CCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEe
Q 014590 297 RTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 297 ~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
.+++.+..+.+|...|++++ |+|++++|++++.||.|++|++.++.....+
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 303 IFEEEIGRVQGHFGPLNTVA-ISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp TTCCEEEEEECCSSCEEEEE-ECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred CCCcchhheecccCcEEEEE-ECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 99999999999999999999 9999999999999999999999876544433
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-32 Score=253.79 Aligned_cols=251 Identities=16% Similarity=0.187 Sum_probs=214.2
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEEEECCCCceee
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVF 186 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~ 186 (422)
|.+.|.+++| +++ +|++|+.||.|++|| .+++.+..+..+. .+..++|+|++..++ ++.++.|++||+.+++.+.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 7889999999 566 999999999999999 6678888888664 456699999999988 8899999999998877543
Q ss_pred e--cCCCc--------------eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 187 P--SREGT--------------FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 187 ~--~~~~~--------------~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
. .+... ....+++.+. ..+++++.++.|++||+.+++.+..+..|...|.+++|+|+ +++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence 2 22211 0334555543 45899999999999999999999999999999999999987 79999
Q ss_pred EcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC
Q 014590 250 GSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
++.|+.|++||+++++.. ..|.+++|+|++ ++++++.|+.|++||+++++.+..+..|...|.+++ |+|++
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~-~s~~~ 342 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGR-ISQDG 342 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEE-ECTTS
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEE-EcCCC
Confidence 999999999999988765 789999999999 999999999999999999999999999999999999 99999
Q ss_pred CEEEEEecCCeEEEEECCCCc--------------------eEEEeeecCC--cccccCCCCCCe
Q 014590 323 STLVVGGIDGVLRVLDQNTGE--------------------VLSRCVMDIG--SASSSSNKVSGV 365 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~~--------------------~~~~~~~~~~--~~~~~~~s~d~~ 365 (422)
++|++++.||.|++||+.+++ .+..+..|.. .+..+.+++++.
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence 999999999999999999888 8888888865 665555555554
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-33 Score=262.58 Aligned_cols=271 Identities=13% Similarity=0.126 Sum_probs=214.8
Q ss_pred EEEcCCCeEEEee-eCC-CceeeEEEec-CCCeEE-EecCCeEEEEECCC---Cc---eeeecCCCceeeeEEEeeeCCe
Q 014590 136 LWSLEGYKCVEEY-SLP-NAASLVDFDF-DESKIV-GLIGTRICIWRRNG---LR---SVFPSREGTFMKGLCMRYFDPE 205 (422)
Q Consensus 136 iwd~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~l~-~~~~~~i~~w~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~ 205 (422)
.|+ .+++.+..+ .+| ..+..++|+| ++..|+ ++.|++|++||+.+ +. ..........+..+++.+.+..
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 488 457888888 666 5567799999 999998 89999999999876 32 1222123334456777777778
Q ss_pred EEEecCCCeEEEEeCC---Ccceeeeeec------------CCccEEEEEe--cCC-CEEEEEcCCCcEEEEeCCCCccc
Q 014590 206 AVVGCEDGTARVFDMY---SRKCSQIIRM------------HCAPVTSLSL--SED-QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~---~~~~~~~~~~------------~~~~v~~l~~--~~~-~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
+++|+.||.|++||++ +++....+.. +...+.++.+ +++ .++++++.|+.|++||+++++.+
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 9999999999999994 5555544432 3445555553 344 79999999999999999988765
Q ss_pred ---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-cCCCceeeeee---EecCCCEEEEEecCCeE
Q 014590 268 ---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR-ISPNVVYSLQH---LQNDTSTLVVGGIDGVL 334 (422)
Q Consensus 268 ---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~---~s~~~~~l~s~~~dg~v 334 (422)
..|.+++|+|++++|++|+.||.|++||+++++++.++. .|...|.++++ |++++.+|++|+.||.|
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 689999999999999999999999999999999998886 77789999951 45678899999999999
Q ss_pred EEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCC--CCCCCeEEEEe-cCEEEEEEeCCCeEE
Q 014590 335 RVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPK--TIRPPITCLAV-GMKKVVTTHNSKYIR 411 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~-~~~~l~s~s~Dg~i~ 411 (422)
++||+.+++++..+..|...+.....++++.... ..... .|...|++++| ++++|++|+.||.|+
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~ 353 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLE------------ELNFCGIRSLNALSTISVSNDKILLTDEATSSIV 353 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGG------------GCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccc------------cceecccccCCceEEEEECCceEEEecCCCCeEE
Confidence 9999999999999999888776666666653310 00112 37889999999 678999999999999
Q ss_pred EEEccCCC
Q 014590 412 LWKFNYSD 419 (422)
Q Consensus 412 iW~~~~~~ 419 (422)
+||+..++
T Consensus 354 ~wd~~~~~ 361 (437)
T 3gre_A 354 MFSLNELS 361 (437)
T ss_dssp EEETTCGG
T ss_pred EEECCCcc
Confidence 99998765
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.9e-32 Score=253.68 Aligned_cols=241 Identities=16% Similarity=0.184 Sum_probs=201.8
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCc
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
.+.+|.+.|++|+| ++| +|++|+.||+|+|||+.+++.+..+.+|.. .+.++++++..++ ++.|+.+++||.....
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~-~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC-ceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 45678899999999 566 999999999999999999999999988753 4566777888888 9999999999998765
Q ss_pred ee---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc----eeeeeecCCccEEEEEecCC--CEEEE--EcC
Q 014590 184 SV---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLSED--QLIIS--GSS 252 (422)
Q Consensus 184 ~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~--~~l~s--~~~ 252 (422)
.. +..+.. ......+.+.+..+++++.|+.+++||..+++ .+.....|.+.|.+++|+|. ..+++ |+.
T Consensus 221 ~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 221 HHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp CEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred eeeEEeccccc-ceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 43 333333 33456666777889999999999999998765 35667789999999999985 56655 468
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEe--CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGT--TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
|++|++||+.+++.. ..+.++.|+|+++.+++++ .|+.|++||+.+++++.++.+|.+.|++++ |+|+|++
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~-~spdg~~ 378 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT-MSPDGAT 378 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSC
T ss_pred CCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCCE
Confidence 999999999998877 8899999999999998765 789999999999999999999999999999 9999999
Q ss_pred EEEEecCCeEEEEECCCCceEEEeee
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
|+||+.||+|+|||+....+......
T Consensus 379 l~S~s~D~tvriWdv~~~~~~~~~~~ 404 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDPARRRER 404 (420)
T ss_dssp EEEEETTTEEEEECCSCSSCC-----
T ss_pred EEEEecCCeEEEEECCCCCccchhhh
Confidence 99999999999999987666555443
No 82
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5e-32 Score=269.71 Aligned_cols=235 Identities=25% Similarity=0.343 Sum_probs=197.9
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
..+.+.+|.+.|.+++| +++ +|+||+.||+|+|||+.+++.+..+.+|.. +..++|+|+++.++ ++.|++|++||.
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 34678899999999999 566 999999999999999999999999988754 56699999999998 899999999998
Q ss_pred CCCcee--eecCCCce--eeeEEEeeeC--CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 180 NGLRSV--FPSREGTF--MKGLCMRYFD--PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 180 ~~~~~~--~~~~~~~~--~~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
.+.... .....++. +..+++.+.+ +.+++|+.|++|++||+++++....+.+|.+.|.+++|+|+ +++++|+.
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 765432 22223333 3445555544 45999999999999999999999999999999999999987 89999999
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC-----------------
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP----------------- 309 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----------------- 309 (422)
||.|++||+++++.+ ..+.+++|+|++.++++++ ++.|++||+++++.+..+..+.
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR 660 (694)
T ss_dssp TSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred CCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence 999999999998876 7899999999999888776 4569999999998877665332
Q ss_pred --CceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 310 --NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 310 --~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
..+++++ |+|+|++|++|+.||.|++||+.
T Consensus 661 ~~~~~~~l~-~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 661 KVIYCTSLN-WSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCEEEEE-ECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEeeeEE-EcCCCCEEEEEcCCCeEEEEecc
Confidence 1367898 99999999999999999999985
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-32 Score=253.40 Aligned_cols=234 Identities=12% Similarity=0.169 Sum_probs=199.8
Q ss_pred ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC----CeEEEeeeCCC-ceeeEEEecC-CCeEE-EecCCeEEEEECC
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG----YKCVEEYSLPN-AASLVDFDFD-ESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~-~~~~~~~~~~-~~~l~-~~~~~~i~~w~~~ 180 (422)
+|...|.+++| +++ +|++|+.||.|++||+.+ .+.+..+..|. .+..++|+|+ +..++ ++.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 58999999999 566 999999999999999987 45777777654 4567999998 78887 8889999999998
Q ss_pred CCc------eeeec----CCCceeeeEEEeee-CCeEEEecCCCeEEEEeCCCcceeeeeecC------CccEEEEEecC
Q 014590 181 GLR------SVFPS----REGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIRMH------CAPVTSLSLSE 243 (422)
Q Consensus 181 ~~~------~~~~~----~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~l~~~~ 243 (422)
+.. ..... .....+..+++.+. +..+++++.|+.|++||+++++.+..+..| ...|.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 876 32221 12233445666666 566999999999999999999998888776 78999999998
Q ss_pred C--CEEEEEcCCC---cEEEEeCCCCcc-c--------cceEeEEEec-CCCEEEEEeCCCeEEEEECCCCeeeeeeccC
Q 014590 244 D--QLIISGSSLG---SIAISGLSSDQR-L--------TGIKTLCYNP-CSRLVFAGTTAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 244 ~--~~l~s~~~dg---~i~iwd~~~~~~-~--------~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
+ .++++++.|+ .|++||++++.. . ..|.+++|+| ++++|++++.||.|++||+++++++..+.+|
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 6 5899999998 999999988632 2 6799999999 9999999999999999999999999999999
Q ss_pred CCceeeeeeEecCC-CEEEEEecCCeEEEEECCCCce
Q 014590 309 PNVVYSLQHLQNDT-STLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 309 ~~~v~~l~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
...|++++ |+|++ .+|++++.||.|++||+.++..
T Consensus 305 ~~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 305 GNWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCceEEEE-ECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999999 99999 8999999999999999987654
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-31 Score=245.26 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=197.7
Q ss_pred eeEEeec-cccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecCCeEEEEE
Q 014590 104 DIDQWKA-HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWR 178 (422)
Q Consensus 104 ~~~~l~~-H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~i~~w~ 178 (422)
....+.. |.+.|.+++| +++ +|++|+.||.|++||+.+++.+..+..+.. +..++| ++..++ ++.|+.|++||
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d 202 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHD 202 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEe
Confidence 3444444 8999999999 566 999999999999999999999999887643 333555 677887 99999999999
Q ss_pred CCCCcee---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC--CEEEEEc--
Q 014590 179 RNGLRSV---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGS-- 251 (422)
Q Consensus 179 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~-- 251 (422)
+...... +..+.+ .+..+++.+++..+++|+.|+.|++||+++++.+..+..|...|.+++|+|+ .++++++
T Consensus 203 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 203 VRIANHQIGTLQGHSS-EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp TTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred cccCcceeeEEcCCCC-CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 9854432 334443 3446667777788999999999999999999999999999999999999985 6777765
Q ss_pred CCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEE--eCCCeEEEEECCCCeee--eeeccCCCceeeeeeEecC
Q 014590 252 SLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAG--TTAGYASCWDLRTMKSL--WETRISPNVVYSLQHLQND 321 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g--~~dg~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~s~~ 321 (422)
.|+.|++||+.+++.+ ..|.+++|+|++++++++ +.||.|++||+.+++.. ..+.+|...|.+++ |+|+
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~-~s~d 360 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA-LSPD 360 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEE-ECTT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEE-ECCC
Confidence 7999999999998876 789999999999999994 48999999999986544 44678999999999 9999
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+++|++++.||.|++||+.+++.+....
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC--------
T ss_pred CCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999999999999999999988776553
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.1e-32 Score=247.01 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=193.9
Q ss_pred cccceeEEEe-cC----C-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEec-CCCeEE-EecCCeEEEEECCC
Q 014590 111 HSVGVDQCRM-KR----G-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDF-DESKIV-GLIGTRICIWRRNG 181 (422)
Q Consensus 111 H~~~v~~v~~-~~----~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~-~~~~~~i~~w~~~~ 181 (422)
|.+.|.+++| ++ + +|++|+.||.|++||+.+++.+..+..+. .+..++|+| ++..++ ++.|+.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999 44 5 89999999999999999999999998654 456699999 888888 88899999999998
Q ss_pred Cceeeec----CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec--------------------------
Q 014590 182 LRSVFPS----REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-------------------------- 231 (422)
Q Consensus 182 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------------------- 231 (422)
++.+... .....+..+++.+.+..+++++.||.|++||+++++....+..
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 8755332 2333445666777778899999999999999998876554443
Q ss_pred --CCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCcc--------------c-------cceEeEEEecC--CCEEEEEe
Q 014590 232 --HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQR--------------L-------TGIKTLCYNPC--SRLVFAGT 286 (422)
Q Consensus 232 --~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------~-------~~v~~~~~~~~--~~~l~~g~ 286 (422)
|...|.+++|+ ++++++++.|+.|++||+.++.. + ..|.+++|+|+ +++|++|+
T Consensus 228 ~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 228 DIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp SSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred cCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 89999999998 77999999999999999988754 1 57889999999 99999999
Q ss_pred CCCeEEEEECCCCeee----eeeccC--CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 287 TAGYASCWDLRTMKSL----WETRIS--PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 287 ~dg~i~iwd~~~~~~~----~~~~~~--~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
.||.|++||+.++++. ..+..| ...|++++ |+|++++|++++.||.|++||+.
T Consensus 307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTS-FSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEE-ECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCcEEEEECCCCCCccccceEEcccccCCceEEEE-eCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999987643 367777 78999999 99999999999999999999985
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-32 Score=271.69 Aligned_cols=245 Identities=15% Similarity=0.178 Sum_probs=196.9
Q ss_pred eEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcC--CCeEEEeeeCCCc-eeeEEEecCCCeEEEecCCeEEEEEC
Q 014590 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNA-ASLVDFDFDESKIVGLIGTRICIWRR 179 (422)
Q Consensus 105 ~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~w~~ 179 (422)
+..+.||.+.|++++| +++ +|++|+.||.|++||+. +++.+..+.+|.. +..++|+++.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~---------------- 65 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK---------------- 65 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTT----------------
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCC----------------
Confidence 3578999999999999 566 99999999999999998 4566677766543 3446666541
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecCC---CEEEEEcCCC
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED---QLIISGSSLG 254 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~---~~l~s~~~dg 254 (422)
.+..+++|+.||.|++||+.+++ .+..+.+|...|.+++|+|+ +.+++|+.||
T Consensus 66 ----------------------~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 66 ----------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp ----------------------SCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ----------------------CCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 02338888999999999998876 67778889999999999974 6999999999
Q ss_pred cEEEEeCCCCccc---------cceEeEEEec-------------CCCEEEEEeCCCeEEEEECCCC----eeeeeeccC
Q 014590 255 SIAISGLSSDQRL---------TGIKTLCYNP-------------CSRLVFAGTTAGYASCWDLRTM----KSLWETRIS 308 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------~~v~~~~~~~-------------~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~~ 308 (422)
.|++||++++... ..|.+++|+| ++.++++|+.||.|++||++++ .....+.+|
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 9999999887433 7899999999 5899999999999999999876 566778899
Q ss_pred CCceeeeeeEecC---CCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCC
Q 014590 309 PNVVYSLQHLQND---TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPK 385 (422)
Q Consensus 309 ~~~v~~l~~~s~~---~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~ 385 (422)
...|++++ |+|+ +++|++|+.||.|++||+.+++....... ....
T Consensus 204 ~~~V~~l~-~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-------------------------------~~~~ 251 (753)
T 3jro_A 204 SDWVRDVA-WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL-------------------------------LKEE 251 (753)
T ss_dssp SSCEEEEE-ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB-------------------------------SSSS
T ss_pred CCcEEEEE-eccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE-------------------------------eccC
Confidence 99999999 9999 89999999999999999987642111100 0113
Q ss_pred CCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 386 TIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 386 ~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.|...|++++| ++++|++|+.||.|++|++..+.
T Consensus 252 ~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 47788999999 68999999999999999998644
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-31 Score=268.92 Aligned_cols=240 Identities=14% Similarity=0.235 Sum_probs=204.3
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-EecCCeEEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
.+..+..+.+|.+.|.+++| +++ +|++|+.||.|++||+.+++.+..+..|. .+..++|+|++..++ ++.|+.|++
T Consensus 44 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 44 TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 45678899999999999999 566 99999999999999999999999998764 456699999999998 889999999
Q ss_pred EECCCCcee---eecCCCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeeeecCC-ccEEEEEecC--C-CEEE
Q 014590 177 WRRNGLRSV---FPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-APVTSLSLSE--D-QLII 248 (422)
Q Consensus 177 w~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~--~-~~l~ 248 (422)
||+.++... +..+.+ .+..+++++ .+..+++++.||.|++||+.+++....+..+. ..+.+++|+| + .+++
T Consensus 124 w~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp EEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred EECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 999877433 333333 344566666 56679999999999999999888777776554 8899999997 5 7999
Q ss_pred EEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecC
Q 014590 249 SGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQND 321 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~ 321 (422)
+++.||.|++||+.+++.+ ..|.+++|+|+++++++++.||.|++||+.+++.+..+..|...+.+++ |+|+
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~-~~~~ 281 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIA-THPT 281 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEE-ECTT
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEE-EccC
Confidence 9999999999999988765 7899999999999999999999999999999999999999999999999 9999
Q ss_pred CC--EEEEEecCCeEEEEECCCCc
Q 014590 322 TS--TLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 322 ~~--~l~s~~~dg~v~vwd~~~~~ 343 (422)
+. +++++ .++.+.+|++..+.
T Consensus 282 ~~~~~~~~~-~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 282 GRKNYIASG-FDNGFTVLSLGNDE 304 (814)
T ss_dssp CGGGEEEEE-ETTEEEEEECSCCS
T ss_pred CCceEEEEE-eCCCEEEEEcCCCC
Confidence 87 45554 56678999876543
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-31 Score=245.03 Aligned_cols=239 Identities=17% Similarity=0.150 Sum_probs=199.4
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee---CCCceeeEEEecCCCeEE-EecCCeEEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS---LPNAASLVDFDFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~-~~~~~~i~~w 177 (422)
.+..+.+|.+.|.+++| +++ +|++++.||.|++||+.+++....+. ....+..++|+|+++.++ ++.++.|++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 77889999999999999 566 99999999999999999987655543 334566799999999998 8899999999
Q ss_pred ECCCCce-----eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeC------------------CCcceeeeeecCCc
Q 014590 178 RRNGLRS-----VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM------------------YSRKCSQIIRMHCA 234 (422)
Q Consensus 178 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~------------------~~~~~~~~~~~~~~ 234 (422)
|+..... .........+..+++.+++..+++++.|+.|++||+ .+++.+..+..|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9987652 122222334456677777778999999999999995 46788888889999
Q ss_pred cEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCC--Cee--e
Q 014590 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT--MKS--L 302 (422)
Q Consensus 235 ~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--~~~--~ 302 (422)
.|.+++|+|+ +++++++.|+.|++||+++++.+ ..|.+++|+|++.++++| .|+.|++|++.+ ++. +
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEEC
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEe
Confidence 9999999987 79999999999999999988776 689999999999988888 899999999987 420 0
Q ss_pred ------------------------------------eee-ccCCCceeeeeeEecCC---CEEEEEecCCeEEEEECCCC
Q 014590 303 ------------------------------------WET-RISPNVVYSLQHLQNDT---STLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 303 ------------------------------------~~~-~~~~~~v~~l~~~s~~~---~~l~s~~~dg~v~vwd~~~~ 342 (422)
..+ .+|...|+++++++++| ++|++|+.||.|++||+.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 283 GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp CCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred eccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 223 48999999999666887 99999999999999998765
Q ss_pred c
Q 014590 343 E 343 (422)
Q Consensus 343 ~ 343 (422)
+
T Consensus 363 ~ 363 (372)
T 1k8k_C 363 E 363 (372)
T ss_dssp H
T ss_pred h
Confidence 4
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-31 Score=247.54 Aligned_cols=238 Identities=13% Similarity=0.186 Sum_probs=203.4
Q ss_pred eeEEeeccccceeEEEe-cC--------CeEEEEecCCeEEEEEcCCCeE-----EEeeeCC------CceeeEEEe---
Q 014590 104 DIDQWKAHSVGVDQCRM-KR--------GLILTGVGDKVMRLWSLEGYKC-----VEEYSLP------NAASLVDFD--- 160 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~--------~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~------~~~~~~~~~--- 160 (422)
.+..+.+|...|.+++| ++ .+|++++.||.|++||+.+++. +..+..+ ..+..++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 57788999999999999 45 5899999999999999998876 7777776 566779999
Q ss_pred -cCCCe-EE-EecCCeEEEEECCC------Ccee-------ee------cCCCceeeeEEEeeeCCeEEEecCCCeEEEE
Q 014590 161 -FDESK-IV-GLIGTRICIWRRNG------LRSV-------FP------SREGTFMKGLCMRYFDPEAVVGCEDGTARVF 218 (422)
Q Consensus 161 -~~~~~-l~-~~~~~~i~~w~~~~------~~~~-------~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 218 (422)
|++.. ++ ++.|+.|++||+.+ ...+ +. ......+..+++.+.+ .+++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99998 87 88999999999987 4422 21 1223445567777778 99999999999999
Q ss_pred eCCCcceeeeeec---C---CccEEEEEecCC-CEEEEEcCC---CcEEEEeCCCCccc--------------------c
Q 014590 219 DMYSRKCSQIIRM---H---CAPVTSLSLSED-QLIISGSSL---GSIAISGLSSDQRL--------------------T 268 (422)
Q Consensus 219 d~~~~~~~~~~~~---~---~~~v~~l~~~~~-~~l~s~~~d---g~i~iwd~~~~~~~--------------------~ 268 (422)
|+++++.+..+.. | ...|.+++|+|+ .++++++.| +.|++||+++++.+ .
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9999999999998 8 999999999987 899999999 99999999887654 3
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec------cC---------------CCceeeeeeEecCC-----
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR------IS---------------PNVVYSLQHLQNDT----- 322 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~~---------------~~~v~~l~~~s~~~----- 322 (422)
.|.+++|+|++++|++++.||.|++||+++++.+..+. +| ...|++++ |+|++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~-~~~~g~~~~~ 371 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK-FLKKGWRSGM 371 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEE-EECTTTSBST
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEE-eccccccccc
Confidence 58999999999999999999999999999999999998 78 89999999 99998
Q ss_pred -----CEEEEEecCCeEEEEECCCCc
Q 014590 323 -----STLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 323 -----~~l~s~~~dg~v~vwd~~~~~ 343 (422)
++|++++.||.|++||+.+|+
T Consensus 372 ~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 372 GADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 90
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3e-31 Score=243.29 Aligned_cols=235 Identities=11% Similarity=0.110 Sum_probs=187.9
Q ss_pred EEeeccccceeEEEecCCeEEEE-----------ecCCeEEEEEcCCCeE----EEeeeC------CCceeeEEEecCCC
Q 014590 106 DQWKAHSVGVDQCRMKRGLILTG-----------VGDKVMRLWSLEGYKC----VEEYSL------PNAASLVDFDFDES 164 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~~~~l~s~-----------~~dg~v~iwd~~~~~~----~~~~~~------~~~~~~~~~~~~~~ 164 (422)
..|.+|.+.|.++++..+.+++| +.|+.+++|++.+... ...... ...+.+++|+|||+
T Consensus 67 ~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~ 146 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT 146 (365)
T ss_dssp EECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS
T ss_pred EEccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC
Confidence 46789999999999876666665 4578899999876422 122111 12246799999999
Q ss_pred eEE-Ee--cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceee--eeecCCccEEEE
Q 014590 165 KIV-GL--IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ--IIRMHCAPVTSL 239 (422)
Q Consensus 165 ~l~-~~--~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~l 239 (422)
+++ ++ .|++|++||+.+++.+........+..+++++++..+++++.+ .+.+|+..+++.+. ....|...|.++
T Consensus 147 ~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 147 VAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKI 225 (365)
T ss_dssp CEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred EEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEE
Confidence 986 44 5799999999998876554444456678888888889998865 56666666776543 345788899999
Q ss_pred EecCC-CEEEEEcCCC----cEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 240 SLSED-QLIISGSSLG----SIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 240 ~~~~~-~~l~s~~~dg----~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
+|+|+ ..+++++.|+ .++.||+...... ..|++++|+|+|++||+|+.|+.|+|||+++++++.
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE
Confidence 99987 7888888877 6888998765432 679999999999999999999999999999999998
Q ss_pred ee-ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 304 ET-RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 304 ~~-~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
++ .+|...|++++ |+|||++|++||.|++|+|||+...
T Consensus 306 ~~~~gH~~~V~~v~-fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 306 IFKQAHSFAITEVT-ISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSSSSCEEEEE-ECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EecCcccCCEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 75 78999999999 9999999999999999999999643
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-30 Score=233.33 Aligned_cols=234 Identities=16% Similarity=0.182 Sum_probs=197.0
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCc
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
.+.+|...|.+++| +++ +|++|+.||+|++||+.+++++..+.+|.. ...++++++..++ ++.++.+.+|+.....
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGSLSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc-eEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence 44578899999999 566 999999999999999999999999988754 4567788888888 8999999999998776
Q ss_pred eee---ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce----eeeeecCCccEEEEEecCC--CE--EEEEcC
Q 014590 184 SVF---PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC----SQIIRMHCAPVTSLSLSED--QL--IISGSS 252 (422)
Q Consensus 184 ~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~l~~~~~--~~--l~s~~~ 252 (422)
... ..+.. ......+...+..+++++.|+.|++||+++++. ......|.+.|.+++++|+ .. +++++.
T Consensus 141 ~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 141 HHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp CEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred eeEEEEcCccC-ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 433 33333 334556666777899999999999999988763 3445678889999999975 33 456788
Q ss_pred CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEe--CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 253 LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGT--TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 253 dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
++.|++||.+..... ..+..+.|+|++..+++++ .|+.|++||+++++++.++.+|.+.|++++ |+|++++
T Consensus 220 ~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~-~spdg~~ 298 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT-MSPDGAT 298 (318)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSC
T ss_pred CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCCE
Confidence 999999999887766 7899999999999888765 799999999999999999999999999999 9999999
Q ss_pred EEEEecCCeEEEEECCCCc
Q 014590 325 LVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~ 343 (422)
|++|+.||+|+|||+.+..
T Consensus 299 l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEETTTEEEEECCSCCC
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999997654
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-30 Score=243.34 Aligned_cols=272 Identities=10% Similarity=0.102 Sum_probs=191.9
Q ss_pred ccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCC---CeEE-EecCCeEEEEECCCC
Q 014590 110 AHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE---SKIV-GLIGTRICIWRRNGL 182 (422)
Q Consensus 110 ~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~-~~~~~~i~~w~~~~~ 182 (422)
+|...|.+++| + ++ +|++++.||.|++||+.+++....+........+.+++.+ ..++ ++.++.|++||+.++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 69999999999 4 44 9999999999999999999999999888778889998854 4777 899999999999887
Q ss_pred cee--eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcc-eeeee---------------ecCCccEEEEEecC
Q 014590 183 RSV--FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-CSQII---------------RMHCAPVTSLSLSE 243 (422)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~-~~~~~---------------~~~~~~v~~l~~~~ 243 (422)
..+ +..+.+ .+..+++.+.++. +++|+.||.|++||+++++ .+..+ ..|...|.+++|+|
T Consensus 177 ~~~~~~~~~~~-~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 177 SCSHILQGHRQ-EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CCCEEECCCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred ceeeeecCCCC-cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 644 333333 3456677777775 8899999999999998765 33333 57889999999998
Q ss_pred C-CEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCC
Q 014590 244 D-QLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPN 310 (422)
Q Consensus 244 ~-~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~ 310 (422)
+ +++++++.||.|++||+.+++.. ..+........+..+++++.++.|++||+.+++++..+.+|..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 7 79999999999999999987754 1222222233456677778899999999999999999999999
Q ss_pred ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCC
Q 014590 311 VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPP 390 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~ 390 (422)
.|++++ |+|++++|++|+.||.|++||+.+++.+........
T Consensus 336 ~v~~~~-~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~------------------------------------- 377 (408)
T 4a11_B 336 TVDCCV-FQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT------------------------------------- 377 (408)
T ss_dssp CEEEEE-EETTTTEEEEEETTSCEEEEEECC-------------------------------------------------
T ss_pred eEEEEE-EcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe-------------------------------------
Confidence 999999 999999999999999999999998887665433211
Q ss_pred eEEEEe-cCEEEEEEeCCCeEEEEEccCCCC
Q 014590 391 ITCLAV-GMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 391 v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
...+.. ....+.+++.|+.+++|+.+.-+|
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 408 (408)
T 4a11_B 378 KSQLNPAFEDAWSSSDEEGGTSAWSHPQFEK 408 (408)
T ss_dssp -------------------------------
T ss_pred ccccccccceeecccCccCceeecCCcccCC
Confidence 011111 234466788899999999876543
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.3e-31 Score=247.81 Aligned_cols=239 Identities=18% Similarity=0.244 Sum_probs=197.0
Q ss_pred ceeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 102 RIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
+..+..+.+|.+.|.++++.+.+|++|+.||+|++||+.+++.+..+..|... +.++..++..++ ++.|+.|++||+.
T Consensus 163 ~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNGMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp CCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC-EEEEECCTTEEEEEETTSCEEEEECS
T ss_pred CeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc-EEEEEEcCCEEEEeeCCCcEEEEeCC
Confidence 34667889999999999995559999999999999999999999999876443 333344566777 9999999999998
Q ss_pred CCcee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEE
Q 014590 181 GLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAI 258 (422)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~i 258 (422)
++... .....++...+.++.+.+..+++|+.||.|++||+++++.+..+.+|...|.++.++ ++++++|+.||.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~i 320 (435)
T 1p22_A 242 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRL 320 (435)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEE
T ss_pred CCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEE
Confidence 87633 233334444466677788889999999999999999999999999999999999994 579999999999999
Q ss_pred EeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe---------eeeeeccCCCceeeeeeEecCC
Q 014590 259 SGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK---------SLWETRISPNVVYSLQHLQNDT 322 (422)
Q Consensus 259 wd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~l~~~s~~~ 322 (422)
||+++++.+ ..|.+++| ++.++++|+.||.|++||+.+++ ++..+.+|.+.|++++ | ++
T Consensus 321 wd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~-~--~~ 395 (435)
T 1p22_A 321 WDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ-F--DE 395 (435)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE-E--CS
T ss_pred EECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEE-e--CC
Confidence 999998876 77889888 78899999999999999998765 7888999999999999 6 78
Q ss_pred CEEEEEecCCeEEEEECCCCceEEE
Q 014590 323 STLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
++|++|+.||.|++||+.+......
T Consensus 396 ~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 396 FQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp SCEEECCSSSEEEEEC---------
T ss_pred CEEEEEeCCCEEEEEECCCCCCccc
Confidence 8999999999999999987655444
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=242.27 Aligned_cols=230 Identities=11% Similarity=0.085 Sum_probs=184.4
Q ss_pred cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEE
Q 014590 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCM 199 (422)
Q Consensus 121 ~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 199 (422)
.++ ++++|+.||+|++||+.+++.+..+.. ..+..+.++|+ .+.++.|++|++|+...
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~-~~v~~~~~~~~--~~s~s~D~~i~~w~~~~------------------ 104 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITT-PNPRTGGEHPA--IISRGPCNRLLLLYPGN------------------ 104 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEE-ECCCTTCCCCS--EEEECSTTEEEEEETTT------------------
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEec-CCceeeeeCCc--eEEecCCCeEEEEEccC------------------
Confidence 344 999999999999999999988877762 23344566666 33377888888887532
Q ss_pred eeeCCeEEEecCCCeEEEEeCCCcceeeeee-cCCccEEEEEecC--C-CEEEEEcCCCcEEEEeCCCCccc--------
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSE--D-QLIISGSSLGSIAISGLSSDQRL-------- 267 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~--~-~~l~s~~~dg~i~iwd~~~~~~~-------- 267 (422)
.+.+||..+++.+..+. .|.++|.+++++| + +++++++.||+|++||+++++..
T Consensus 105 --------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 170 (343)
T 3lrv_A 105 --------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD 170 (343)
T ss_dssp --------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS
T ss_pred --------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC
Confidence 56677888887666654 6778999999999 6 79999999999999999988765
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee-eeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL-WETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
..+.+++|+|++.++++|+.||.|++||+++++.+ ..+.. |.+.|++++ |+|++.+|++++ |+.|++||+++++.+
T Consensus 171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~-fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVK-FADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEE-ECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEE-EeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 57999999999999999999999999999999887 78888 999999999 999999999999 559999999988766
Q ss_pred EEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCe--EEEEe--cCEEEEEEeC-CCeEEEEEccCCCC
Q 014590 346 SRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPI--TCLAV--GMKKVVTTHN-SKYIRLWKFNYSDK 420 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v--~~i~~--~~~~l~s~s~-Dg~i~iW~~~~~~~ 420 (422)
..+..... |...+ .+++| ++++|++++. |+.|++|+++...+
T Consensus 249 ~~~~~~~~---------------------------------~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 249 LAYPTYTI---------------------------------PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp BSSCCCBC--------------------------------------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred eeeccccc---------------------------------ccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 55433111 11222 46888 5899999998 99999999976543
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-30 Score=241.79 Aligned_cols=268 Identities=12% Similarity=0.110 Sum_probs=211.1
Q ss_pred ccceeEEEe-cCCeEEEEecCCeEEEEEcCCCe---EEEeeeCCC-----------------------------------
Q 014590 112 SVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYK---CVEEYSLPN----------------------------------- 152 (422)
Q Consensus 112 ~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~----------------------------------- 152 (422)
..++.+++| ++|.++.++.++.|++||+.+|+ .+..+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 357899999 56644444467899999999998 666665322
Q ss_pred --------------------ceeeEEEecCCCeE-E-EecCCeEEEEECC--CCcee--eec-CCCceeeeEEEeeeCCe
Q 014590 153 --------------------AASLVDFDFDESKI-V-GLIGTRICIWRRN--GLRSV--FPS-REGTFMKGLCMRYFDPE 205 (422)
Q Consensus 153 --------------------~~~~~~~~~~~~~l-~-~~~~~~i~~w~~~--~~~~~--~~~-~~~~~~~~~~~~~~~~~ 205 (422)
.+..++|+|+++.| + ++.|+.|++||+. ++..+ +.. .....+..+++.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 35669999999996 5 7789999999998 66543 221 22233456777778888
Q ss_pred EEEecCCCeEEEEeCCCcceee----eeecCCccEEEEEecCC---C-EEEEEcCCCcEEEEeCCCCccc--------cc
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQ----IIRMHCAPVTSLSLSED---Q-LIISGSSLGSIAISGLSSDQRL--------TG 269 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~v~~l~~~~~---~-~l~s~~~dg~i~iwd~~~~~~~--------~~ 269 (422)
|++|+.+|.|++|++.+++... .+.+|...|.+++|+|+ + ++++|+.|+.|++||+++++.+ ..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998877554 77889999999999975 4 8999999999999999987754 78
Q ss_pred eEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-------------------------CCCceeeeeeEecCCCE
Q 014590 270 IKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-------------------------SPNVVYSLQHLQNDTST 324 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-------------------------~~~~v~~l~~~s~~~~~ 324 (422)
|.+++|+ ++++|++|+.|+.|++||+++++.+..+.. ....|.+++ ++|++++
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~-~~~~~~~ 321 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII-KSKNLPF 321 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE-ECSSSSE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE-EeCCCCE
Confidence 9999999 999999999999999999999988877753 235688998 8999999
Q ss_pred EEEEe-cCCeEEEEEC--CCC---ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec-
Q 014590 325 LVVGG-IDGVLRVLDQ--NTG---EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG- 397 (422)
Q Consensus 325 l~s~~-~dg~v~vwd~--~~~---~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~- 397 (422)
|++++ .|+.|++|++ .++ +.+..+.. | ..|.+++|+
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~------------------------------------~-~~v~~~~~~~ 364 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITF------------------------------------P-YNVISLSAHN 364 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEEC------------------------------------S-SCEEEEEEET
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEecc------------------------------------C-CceEEEEecC
Confidence 99999 8999999999 555 44444433 2 478999994
Q ss_pred CEEEEEEeC-------CCeEEEEEccCC
Q 014590 398 MKKVVTTHN-------SKYIRLWKFNYS 418 (422)
Q Consensus 398 ~~~l~s~s~-------Dg~i~iW~~~~~ 418 (422)
+.++++.+. +..|.+|.++..
T Consensus 365 ~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 365 DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 455555433 556899987654
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.9e-31 Score=241.02 Aligned_cols=236 Identities=16% Similarity=0.178 Sum_probs=191.9
Q ss_pred EeeccccceeEEEe-cC---C-eEEEEecCCeEEEEEcCCCe-EEEeeeCCCc-eeeEE------EecCCCeEE-EecCC
Q 014590 107 QWKAHSVGVDQCRM-KR---G-LILTGVGDKVMRLWSLEGYK-CVEEYSLPNA-ASLVD------FDFDESKIV-GLIGT 172 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~---~-~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~-~~~~~------~~~~~~~l~-~~~~~ 172 (422)
...+|.+.|.+++| ++ + +|++|+.||.|++||+.+++ .+..+..|.. +..++ |+++++.++ ++.|+
T Consensus 60 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~ 139 (357)
T 3i2n_A 60 REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139 (357)
T ss_dssp EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC
Confidence 34489999999999 44 5 99999999999999999887 7788877654 44464 568899998 89999
Q ss_pred eEEEEECCCCc-e--eeecCCCc---eeeeEE----EeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec
Q 014590 173 RICIWRRNGLR-S--VFPSREGT---FMKGLC----MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 173 ~i~~w~~~~~~-~--~~~~~~~~---~~~~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 242 (422)
.|++||+.++. . .+..+.++ .+..++ +.+.+..+++++.|+.|++||+++++.... ..|...|.+++|+
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFD 218 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEES
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcC
Confidence 99999998865 2 23333332 223333 345677799999999999999998887544 5688999999999
Q ss_pred C---C-CEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCC-EEEEEeCCCeEEEEECCCC------
Q 014590 243 E---D-QLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRTM------ 299 (422)
Q Consensus 243 ~---~-~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~------ 299 (422)
| + +.+++++.||.|++||+++++.. ..|.+++|+|+++ ++++|+.||.|++||++++
T Consensus 219 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 219 RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 8 5 89999999999999999876543 6899999999998 8999999999999999853
Q ss_pred -------------eeeeeeccCCCceeeeeeEecCCCEEE-EEecCCeEEEEECCCCce
Q 014590 300 -------------KSLWETRISPNVVYSLQHLQNDTSTLV-VGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 300 -------------~~~~~~~~~~~~v~~l~~~s~~~~~l~-s~~~dg~v~vwd~~~~~~ 344 (422)
+.+..+.+|...|++++ |+|++++|+ +++.||.|++||+.+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQPISSLD-WSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSSCEEEEE-ECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccccCCCCeeEEE-EcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 45677888999999999 999999888 899999999999987653
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-30 Score=243.09 Aligned_cols=252 Identities=15% Similarity=0.168 Sum_probs=191.5
Q ss_pred eeEEeeccccceeEEEe-cC-C-eEEEEecCCeEEEEEcCC----------CeEEEeeeCCCc-eeeEEEecCCCeEEEe
Q 014590 104 DIDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEG----------YKCVEEYSLPNA-ASLVDFDFDESKIVGL 169 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~-~-~l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 169 (422)
....+.+|.+.|++++| ++ + +|++++.||.|++||+.+ .+.+..+..|.. +..++|+|++..
T Consensus 120 ~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~---- 195 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG---- 195 (430)
T ss_dssp EEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT----
T ss_pred EEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC----
Confidence 45667889999999999 44 4 999999999999999986 344555555433 233555555431
Q ss_pred cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-------eeeeeecCCccEEEEEec
Q 014590 170 IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-------CSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 170 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~l~~~ 242 (422)
.|++|+.||.|++||+.++. ....+.+|...|.+++|+
T Consensus 196 -----------------------------------~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 240 (430)
T 2xyi_A 196 -----------------------------------YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH 240 (430)
T ss_dssp -----------------------------------EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEEC
T ss_pred -----------------------------------eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEe
Confidence 36777777777777776532 145567899999999999
Q ss_pred C-C-CEEEEEcCCCcEEEEeCCCCc---cc-------cceEeEEEecCCC-EEEEEeCCCeEEEEECCC-CeeeeeeccC
Q 014590 243 E-D-QLIISGSSLGSIAISGLSSDQ---RL-------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRT-MKSLWETRIS 308 (422)
Q Consensus 243 ~-~-~~l~s~~~dg~i~iwd~~~~~---~~-------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~~ 308 (422)
| + .++++++.||.|++||++++. .. ..|++++|+|++. ++++|+.||.|++||+++ ..++..+..|
T Consensus 241 p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h 320 (430)
T 2xyi_A 241 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 320 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC
Confidence 8 4 799999999999999999873 22 7899999999987 788999999999999997 5678889999
Q ss_pred CCceeeeeeEecCCC-EEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCC
Q 014590 309 PNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTI 387 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h 387 (422)
...|++++ |+|+++ +|++++.||.|++||+............ .++ +..+.....+|
T Consensus 321 ~~~v~~i~-~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------~~~------------~~~~~~~~~~h 377 (430)
T 2xyi_A 321 KDEIFQVQ-WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA----------EDG------------PPELLFIHGGH 377 (430)
T ss_dssp SSCEEEEE-ECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH----------HHC------------CTTEEEECCCC
T ss_pred CCCEEEEE-ECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc----------ccC------------CcceEEEcCCC
Confidence 99999999 999985 7999999999999999763221110000 000 00011123567
Q ss_pred CCCeEEEEe--cCE-EEEEEeCCCeEEEEEccC
Q 014590 388 RPPITCLAV--GMK-KVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 388 ~~~v~~i~~--~~~-~l~s~s~Dg~i~iW~~~~ 417 (422)
...|++++| +++ +|++++.||.|++|++..
T Consensus 378 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 378 TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 789999999 455 999999999999999864
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=9.3e-29 Score=229.08 Aligned_cols=248 Identities=10% Similarity=0.098 Sum_probs=207.4
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eE-EEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-E-ecCCeEEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICI 176 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~~ 176 (422)
+..+..+.+|.. +.+++| +++ ++ ++++.|+.|++||+.+++.+..+..+..+..++|+|+++.++ + ..++.|++
T Consensus 22 ~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 22 NKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp TEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEE
Confidence 456677777764 899999 566 54 778899999999999999999999888888899999999886 4 45699999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE-EEEcCC
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSL 253 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l-~s~~~d 253 (422)
||+.+++.+.....+.....+++.++++.+ ++++.++.|++||+.+++.+..+..+. .+.+++|+|+ +.+ ++++.+
T Consensus 101 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 101 IDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTT
T ss_pred EECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCC
Confidence 999998765433333344567777777776 788889999999999999888887654 5689999987 555 678889
Q ss_pred CcEEEEeCCCCccc------cceEeEEEecCCCEEEEEe---CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 254 GSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGT---TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 254 g~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
+.|++||+++++.. ..+.+++|+|+++++++++ .++.|++||+.+++.+..+..|. .+.+++ |+|++++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~-~s~dg~~ 257 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIA-VTPDGKK 257 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEE-ECTTSSE
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEE-EccCCCE
Confidence 99999999988765 6788999999999999888 68999999999999988888765 478898 9999997
Q ss_pred E-EEEecCCeEEEEECCCCceEEEeeecCC
Q 014590 325 L-VVGGIDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 325 l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
| ++++.|+.|++||+.+++.+..+..+..
T Consensus 258 l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred EEEEcCCCCEEEEEECCCCcEEEEEECCcC
Confidence 7 6778899999999999999998887655
No 99
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.8e-30 Score=225.68 Aligned_cols=272 Identities=12% Similarity=0.048 Sum_probs=187.9
Q ss_pred ceeeEEeeccccc----eeEEEec--CC---eEEEEecCCeEEEEEcCCC---eEEEeeeCCCc-eeeEEEecCCCeEE-
Q 014590 102 RIDIDQWKAHSVG----VDQCRMK--RG---LILTGVGDKVMRLWSLEGY---KCVEEYSLPNA-ASLVDFDFDESKIV- 167 (422)
Q Consensus 102 ~~~~~~l~~H~~~----v~~v~~~--~~---~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~- 167 (422)
..++.+|+.-.+. +.++.|+ +. .+++++. ..|++|+..++ +.++++..++. +..+.+.||...|+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 25 LQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceee
Confidence 3466777765543 3444452 32 6677765 69999999998 88999888763 34466666555444
Q ss_pred -EecCC---eEEEEECCCC-----ceeeecCCCceeeeEEEeeeCCeEEEec---CCCeEEEEeC-CCcceeeeeecCCc
Q 014590 168 -GLIGT---RICIWRRNGL-----RSVFPSREGTFMKGLCMRYFDPEAVVGC---EDGTARVFDM-YSRKCSQIIRMHCA 234 (422)
Q Consensus 168 -~~~~~---~i~~w~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~-~~~~~~~~~~~~~~ 234 (422)
+-.+= .|+..-.... +.+.. .++...+..+ ....++..+ .|+.|++|++ .+|+.+..+.+|..
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s--~g~~~~v~~l--~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~ 179 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLK--SGNIKAVLGL--TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP 179 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEE--EEEEEEEEEE--TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCC
T ss_pred eeeccccccceEEEEECCCccccccEEEe--CCCeEEEEec--CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCC
Confidence 11111 1111111111 11111 1122222222 223344443 5999999999 55888888889999
Q ss_pred cEEEEEecC---C-CEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEE------------EEEeCC
Q 014590 235 PVTSLSLSE---D-QLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLV------------FAGTTA 288 (422)
Q Consensus 235 ~v~~l~~~~---~-~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l------------~~g~~d 288 (422)
.+..++|++ + ..+++++.|++|++||+.+++.+ ..+.+++|+|+|.++ ++|+.|
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 998988886 3 79999999999999999999876 356677999999876 567889
Q ss_pred CeEEEEECCCCeeeeee-----ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCC
Q 014590 289 GYASCWDLRTMKSLWET-----RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVS 363 (422)
Q Consensus 289 g~i~iwd~~~~~~~~~~-----~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d 363 (422)
++|++||..+++.+..+ .+|...+.+.. .++.++++|+.||+|+|||+.+++++.++.+|..
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~---~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~---------- 326 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD---VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD---------- 326 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE---EETTEEEEEETTSCEEEEETTTCSEEEEECCC------------
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcceeEccc---cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC----------
Confidence 99999999999887665 36665554444 3488999999999999999999999999976544
Q ss_pred CeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 364 GVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 364 ~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
..+.+++| |+++|+||+.|++|+|||+.
T Consensus 327 -------------------------~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 327 -------------------------QHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp -------------------------CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred -------------------------CeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 23446788 68899999999999999963
No 100
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=254.48 Aligned_cols=219 Identities=12% Similarity=0.051 Sum_probs=173.6
Q ss_pred cCCCeEE-EecCCeEEEEECCCCcee------eecCCCceeeeEEEeee------CCeEEEecCCCeEEEEeCCCcce--
Q 014590 161 FDESKIV-GLIGTRICIWRRNGLRSV------FPSREGTFMKGLCMRYF------DPEAVVGCEDGTARVFDMYSRKC-- 225 (422)
Q Consensus 161 ~~~~~l~-~~~~~~i~~w~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~-- 225 (422)
|++..++ ++.|++|++|++.+++.. +..+.+ .+..+++++. +..|++++.||+|++||+.+++.
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCC-SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC-cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 4444555 667899999999876532 222333 3445667665 35699999999999999976642
Q ss_pred ---------eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc--------cceEeE--EEecCC-CEEEEE
Q 014590 226 ---------SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL--------TGIKTL--CYNPCS-RLVFAG 285 (422)
Q Consensus 226 ---------~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~--~~~~~~-~~l~~g 285 (422)
...+.+|...|.+++|++++.|++|+.||+|++||++++... ..|.++ +|+|++ .+|++|
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 246778999999999998889999999999999999876432 789999 578888 899999
Q ss_pred eCCCeEEEEECCCCeeeeeeccCCC--ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCC
Q 014590 286 TTAGYASCWDLRTMKSLWETRISPN--VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVS 363 (422)
Q Consensus 286 ~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d 363 (422)
+.|++|++||+++++++..+.+|.. .|.+++ |+|+++.+++++.|++|++||++++.++.++.+
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~-fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g------------- 395 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVV-YCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS------------- 395 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEE-EETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-------------
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccceE-eCCCcCeEEEeCCCCcEEEEECcccccceeeec-------------
Confidence 9999999999999888777777753 588999 999999999999999999999999888777755
Q ss_pred CeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccC
Q 014590 364 GVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 364 ~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
|...|++++| ++++|+||+.||+|++|++..
T Consensus 396 -----------------------H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 396 -----------------------RETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp -----------------------CSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred -----------------------CCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 4558999999 688999999999999999754
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=4.1e-29 Score=231.47 Aligned_cols=256 Identities=13% Similarity=0.129 Sum_probs=213.2
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
.+++++.|+.|++||+.+++.+..+..+..+..++|+|+++.++ ++.++.|++||+.+++.+.....+.....+++.+
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp 83 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSP 83 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECT
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECC
Confidence 68889999999999999999999999988888899999999874 5589999999999887654444344556777777
Q ss_pred eCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE-EEEcCCCcEEEEeCCCCccc------cceEe
Q 014590 202 FDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSIAISGLSSDQRL------TGIKT 272 (422)
Q Consensus 202 ~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l-~s~~~dg~i~iwd~~~~~~~------~~v~~ 272 (422)
+++.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+ +.+ ++++.|+.|++||+.+++.. ..+.+
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 162 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKG 162 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcce
Confidence 78876 56667799999999999988887755 46899999987 555 78888999999999988766 67789
Q ss_pred EEEecCCCEE-EEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe---cCCeEEEEECCCCceEEEe
Q 014590 273 LCYNPCSRLV-FAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG---IDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 273 ~~~~~~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~---~dg~v~vwd~~~~~~~~~~ 348 (422)
++|+|+++++ ++++.++.|++||+++++.+..+.. ...+.+++ |+|++++|++++ .++.|++||+.+++.+..+
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~-~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIA-VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEE-ECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceE-ECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 9999999987 5677899999999999988877654 46789998 999999999888 6899999999999887777
Q ss_pred eecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEE-EEEeCCCeEEEEEccCCC
Q 014590 349 VMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKV-VTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 349 ~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l-~s~s~Dg~i~iW~~~~~~ 419 (422)
..+ ..+.+++| ++++| ++++.|+.|++||+.+++
T Consensus 241 ~~~-------------------------------------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 241 PVG-------------------------------------PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp ECC-------------------------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ecC-------------------------------------CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 542 24677888 56655 788899999999998653
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=7.8e-31 Score=244.12 Aligned_cols=267 Identities=13% Similarity=0.117 Sum_probs=208.9
Q ss_pred ceeEEEecCC---eEEEEecCCeEEEEEcCCCe----EEEeeeCCC-ceeeEEEec-CCCeEE-EecCCeEEEEECCCCc
Q 014590 114 GVDQCRMKRG---LILTGVGDKVMRLWSLEGYK----CVEEYSLPN-AASLVDFDF-DESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 114 ~v~~v~~~~~---~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~-~~~~~~~~~-~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
....+++++. ++++++.||.|+||++.... .+..+.+|. .+..++|+| ++..|+ ++.|+.|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 3445677544 55568899999999996542 233455554 456699999 888888 8899999999998762
Q ss_pred ---------eeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeee--ecCCccEEEEEecCC-CEEEEE
Q 014590 184 ---------SVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQII--RMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 184 ---------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
..+..+.+ .+..+++.+.+ ..+++++.|+.|++||+++++.+..+ ..|...|.+++|+|+ ++++++
T Consensus 116 ~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTK-RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CSSCBCSCSEEEECCSS-CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CccccCCceEEecCCCC-eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 22344443 34566777776 46999999999999999999999998 789999999999987 799999
Q ss_pred cCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEE---eCCCeEEEEECCCCee-eeeec-cCCCceeeee
Q 014590 251 SSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAG---TTAGYASCWDLRTMKS-LWETR-ISPNVVYSLQ 316 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g---~~dg~i~iwd~~~~~~-~~~~~-~~~~~v~~l~ 316 (422)
+.||.|++||+++++.+ ..+.+++|+|+++++++| +.|+.|++||+++++. +.... .|...+.+++
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 99999999999988765 238899999999999999 7899999999998654 33332 4667899998
Q ss_pred eEecCCCEEE-EEecCCeEEEEECCCCce-EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEE
Q 014590 317 HLQNDTSTLV-VGGIDGVLRVLDQNTGEV-LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCL 394 (422)
Q Consensus 317 ~~s~~~~~l~-s~~~dg~v~vwd~~~~~~-~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i 394 (422)
|+|++++|+ +|+.||.|++||+.+++. +..+..+. |...|.++
T Consensus 275 -~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~----------------------------------~~~~v~~~ 319 (402)
T 2aq5_A 275 -FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS----------------------------------SKESQRGM 319 (402)
T ss_dssp -EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC----------------------------------CSSCCSEE
T ss_pred -EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc----------------------------------cCCcccce
Confidence 999999886 555799999999998874 55554422 34688999
Q ss_pred Ee--cCEEEEEEeCCCeEEEEEccCC
Q 014590 395 AV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 395 ~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+| ++.+++ +.|+.+++|++..+
T Consensus 320 ~~sp~~~~~~--s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 320 GYMPKRGLEV--NKCEIARFYKLHER 343 (402)
T ss_dssp EECCGGGSCG--GGTEEEEEEEEETT
T ss_pred EEecccccce--ecceeEEEEEcCCC
Confidence 99 455554 46779999998764
No 103
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=4.6e-30 Score=237.31 Aligned_cols=227 Identities=9% Similarity=0.066 Sum_probs=184.0
Q ss_pred eeccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCC----CceeeEEEecCCCeEE-EecCCeEEEEEC
Q 014590 108 WKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP----NAASLVDFDFDESKIV-GLIGTRICIWRR 179 (422)
Q Consensus 108 l~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~~~i~~w~~ 179 (422)
+.+|.+.|.+++| + ++ +|++++.|+.|++||+.+ ..+..+..+ ..+..++|+|++..++ ++.|+.|++||+
T Consensus 114 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 114 GMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp CCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred cCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 3479999999999 4 34 999999999999999986 555555543 3467799999999998 999999999999
Q ss_pred CCCce-eeecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCC----cceeeeeecCCccEEEEEecC-C-CEEEEEc
Q 014590 180 NGLRS-VFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYS----RKCSQIIRMHCAPVTSLSLSE-D-QLIISGS 251 (422)
Q Consensus 180 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~ 251 (422)
..... .+..+.+ .+..+++.+.++ .+++|+.|+.|++||+++ ++.+..+ +|...|.+++|+| + .++++++
T Consensus 193 ~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 193 DGHEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp TSCEEEEEECSSS-CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred CCCEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 54432 2344443 445677777887 799999999999999987 5566666 6999999999999 7 8999999
Q ss_pred CCCcEEEEeCCCCccc------------------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 252 SLGSIAISGLSSDQRL------------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
.|+.|++||+++++.. ..+..++++|++++ +|+.||.|++||+.+++.+.++.+
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 9999999999887664 12333556666665 667899999999999999999987
Q ss_pred --CCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 308 --SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 308 --~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
|...+..++ |+|++++|++|+ ||.|++||+++
T Consensus 349 ~~~~~~~~~~~-~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNK-FSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEE-ECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEE-EecCccEEEEec-CCcEEEEecCC
Confidence 456777778 999999999997 99999999874
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=7.6e-31 Score=246.67 Aligned_cols=240 Identities=12% Similarity=0.062 Sum_probs=184.9
Q ss_pred eeEEeeccccceeEEEec--CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC---ceeeEEEecCCCeEE-EecCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV-GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-~~~~~~i~~ 176 (422)
.+..+.||.+.|++|+|+ ++ +|+||+.||+|++||++++........+. ....++|++++..|+ ++.||.|++
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 455678999999999994 45 99999999999999998765443333322 235599999999998 889999999
Q ss_pred EECCCCce-eeecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeee---eecCCccEEEEEecCC-CEEEEE
Q 014590 177 WRRNGLRS-VFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQI---IRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 177 w~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
||+++... .+..+.+. +..+++.+.++ .+++|+.|+.|++||+++++.... ..+|..+|.+++|+|+ .+|+++
T Consensus 236 wd~~~~~~~~~~~h~~~-v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 236 LNMDGKELWNLRMHKKK-VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp EESSSCBCCCSBCCSSC-EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred eccCcceeEEEecccce-EEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 99976542 23444433 34556666665 488999999999999988764433 3579999999999987 899999
Q ss_pred cCCCcEEEEeCCCCccc-------------cceEeEEEecCCCEEEEEe------------CCCeEEEEECCCCeeeeee
Q 014590 251 SSLGSIAISGLSSDQRL-------------TGIKTLCYNPCSRLVFAGT------------TAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~~l~~g~------------~dg~i~iwd~~~~~~~~~~ 305 (422)
+.||.|++||+.++... ..+....|+|++..+++++ .++.|++||..+++.+..+
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999999999987654 2334567788887777764 2357999999999988876
Q ss_pred c-cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 306 R-ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 306 ~-~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
. +|...|.++..|+|+|++|++|+ |+.|+|||+++++..
T Consensus 395 ~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 395 YDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred eCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 5 57788998854999999999876 889999999988653
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-29 Score=227.79 Aligned_cols=241 Identities=13% Similarity=0.142 Sum_probs=196.3
Q ss_pred cceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCC---eEEEeeeCCCc-eeeEEEecCCCeEE-EecCCe
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~ 173 (422)
.+.....+.+|.+.|.+++| +++ +|++|+.||.|++|++... +.+..+..+.. +..+++ +++.++ ++.|+.
T Consensus 48 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~ 125 (313)
T 3odt_A 48 DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT 125 (313)
T ss_dssp SSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred CCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC
Confidence 34567788999999999999 566 9999999999999998754 55666665543 333555 677887 999999
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeeeec-CCccEEEEEecCCCEEEEEc
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRM-HCAPVTSLSLSEDQLIISGS 251 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~~~l~s~~ 251 (422)
|++||.......+..+.+... .+++.+ .+..+++++.|+.|++|| .++....+.. |...+.+++++|+..+++++
T Consensus 126 i~~~d~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 202 (313)
T 3odt_A 126 AKVWKEGSLVYNLQAHNASVW-DAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCS 202 (313)
T ss_dssp EEEEETTEEEEEEECCSSCEE-EEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEE
T ss_pred EEEEcCCcEEEecccCCCcee-EEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEcc
Confidence 999993333344555555543 444444 677899999999999999 4566677766 89999999999886799999
Q ss_pred CCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 252 SLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
.||.|++||+++++.+ ..|.+++|+|++ .+++++.||.|++||+++++.+..+..|...|.+++ |+|+++
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~-~~~~~~- 279 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVD-CMSNGD- 279 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEE-ECTTSC-
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEE-EccCCC-
Confidence 9999999999988876 789999999999 588999999999999999999999999999999999 999998
Q ss_pred EEEEecCCeEEEEECCCCceEEEee
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+++++.||.|++||+.+++......
T Consensus 280 ~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEEETTSCEEEEESCGGGCCC---
T ss_pred EEEEeCCCcEEEEeCCCCceeehhh
Confidence 6679999999999999887655443
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3e-29 Score=229.18 Aligned_cols=242 Identities=13% Similarity=0.112 Sum_probs=181.5
Q ss_pred EEEcCCCeEEEeeeCC-CceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCC
Q 014590 136 LWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDG 213 (422)
Q Consensus 136 iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~ 213 (422)
||++.+.+.+..+..| ..+.+++|+||++.|+++.+..+++|+.++........... ...+++.+.++.+ ++++.|+
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRH-LSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSC-CCEEEECTTSSEEEEECSSTT
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCC-eEEEEEcCCCCEEEEEECCcc
Confidence 4666666777666655 45677999999999996666678999998877654433322 4456666666665 6788889
Q ss_pred eEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCC-ccc----cceEeEEEecCCCEEEE--Ee
Q 014590 214 TARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD-QRL----TGIKTLCYNPCSRLVFA--GT 286 (422)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~-~~~----~~v~~~~~~~~~~~l~~--g~ 286 (422)
+|++||..+++.+..+. +..+|.+++++++..+++ .|+.|++||+.++ +.+ .....+++++ .++++ |+
T Consensus 82 ~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~ 156 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEF 156 (355)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESS
T ss_pred EEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCC
Confidence 99999999999998887 667999999987754443 4789999999988 544 3334556677 56666 57
Q ss_pred CCCeEEEEECCCCe---------------e-eeeeccCCCceeeeeeEecCCCEEEEEecCCe-EEEEECCCCceEEEee
Q 014590 287 TAGYASCWDLRTMK---------------S-LWETRISPNVVYSLQHLQNDTSTLVVGGIDGV-LRVLDQNTGEVLSRCV 349 (422)
Q Consensus 287 ~dg~i~iwd~~~~~---------------~-~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~ 349 (422)
.||.|++||+.+++ + +..+.+|.+.|++++ |+|++++|++|+.||+ |++||+++++++..+.
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~-~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVR-LNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEE-ECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEE-ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 89999999999765 2 678899999999999 9999999999999998 9999999999998885
Q ss_pred ecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 350 MDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 350 ~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
. ..|...|++++| ++++|++++.|++|++||+..+
T Consensus 236 ~----------------------------------g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 236 R----------------------------------GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp C----------------------------------TTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred c----------------------------------CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 2 125569999999 6899999999999999999765
No 107
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=9.1e-31 Score=241.41 Aligned_cols=225 Identities=16% Similarity=0.130 Sum_probs=179.5
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCc--ee--eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR--SV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-- 224 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-- 224 (422)
..+..++|+|+++.|+ ++.|+.|++||+.++. .+ +..+.+ .+..+++.+++..|++++.|+.|++||+.+++
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK-IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS-CEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc-eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 4577899999999999 7799999999999873 22 333333 34456677777889999999999999999887
Q ss_pred -eeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCcc---c--------cceEeEEEecCCCEEEEEeCCCeE
Q 014590 225 -CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR---L--------TGIKTLCYNPCSRLVFAGTTAGYA 291 (422)
Q Consensus 225 -~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~---~--------~~v~~~~~~~~~~~l~~g~~dg~i 291 (422)
....+..|...|.+++|+|+ +++++++.|+.|++||+++++. . ..|.+++|+|++++|++|+.|+.|
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 170 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKA 170 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEE
Confidence 66777889999999999987 8999999999999999988763 2 679999999999999999999999
Q ss_pred EEEECC------------------CCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce----EEEee
Q 014590 292 SCWDLR------------------TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV----LSRCV 349 (422)
Q Consensus 292 ~iwd~~------------------~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~----~~~~~ 349 (422)
++||+. .++++..+ +|...|++++ |+|++++|++++.||.|++||+.+++. +..+.
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~-~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG-FSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE-ECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 999985 35566677 8999999999 999999999999999999999998876 44443
Q ss_pred ecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 350 MDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 350 ~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
+|...|.+++| ++++|++|+.|+.+ +|+..
T Consensus 249 ------------------------------------~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 249 ------------------------------------LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ------------------------------------CSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ------------------------------------CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 35668999999 78999999877766 66554
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-30 Score=239.53 Aligned_cols=249 Identities=10% Similarity=0.032 Sum_probs=196.2
Q ss_pred ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEEEecCCeEEEEECCCCceee
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVF 186 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~ 186 (422)
.-...|.+|+| +|| ++||++.|++|+ |...++.+ .+| ..+..++|+|+| .++.+.+|+.+... ++
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~-~~ 80 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE------FENKLDFELAQQNG-LL 80 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC------CCCTTTTSCCCSSC-SS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC------CcceEEEEeCCCce-Ee
Confidence 34588999999 688 999999999999 76666544 454 345669999999 46666666654333 22
Q ss_pred ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-----cEEEEEecCC-CEEEEEcCCCcEEEEe
Q 014590 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA-----PVTSLSLSED-QLIISGSSLGSIAISG 260 (422)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~l~~~~~-~~l~s~~~dg~i~iwd 260 (422)
.......+..+++++++..|++++.||+|++||.++ ++..+. |.. .|.+++|+|+ +++++|+.||+|++||
T Consensus 81 ~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 81 NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 212255677889999999999999999999999643 666666 665 4999999998 8999999999999999
Q ss_pred CCCCcc-------c-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee---eeee-ccCCCceeeeeeE
Q 014590 261 LSSDQR-------L-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS---LWET-RISPNVVYSLQHL 318 (422)
Q Consensus 261 ~~~~~~-------~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~---~~~~-~~~~~~v~~l~~~ 318 (422)
+.++.. + ..|.+++|+|+| +++++.|+.|++||+.+++. ..++ .+|...|.+++ |
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva-F 234 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK-I 234 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE-E
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE-E
Confidence 998753 1 489999999999 88889999999999987763 3456 47888999999 8
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-- 396 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-- 396 (422)
+ |+.||+++ +++|++||+.+++......+ |...|..++|
T Consensus 235 s--g~~LASa~-~~tIkLWd~~~~~~~~~~~g------------------------------------h~~~V~~va~~~ 275 (588)
T 2j04_A 235 V--DYKVVLTC-PGYVHKIDLKNYSISSLKTG------------------------------------SLENFHIIPLNH 275 (588)
T ss_dssp E--TTEEEEEC-SSEEEEEETTTTEEEEEECS------------------------------------CCSCCCEEEETT
T ss_pred E--CCEEEEEe-CCeEEEEECCCCeEEEEEcC------------------------------------CCceEEEEEeee
Confidence 7 68999997 69999999987665333213 5567888888
Q ss_pred --cCEEEEEEeCCCeEEEEEcc
Q 014590 397 --GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 397 --~~~~l~s~s~Dg~i~iW~~~ 416 (422)
|+..|+++++||+ ++|..+
T Consensus 276 s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 276 EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCEEEEECSSCEE-EEEESS
T ss_pred CCCCCEEEEEcCCCC-EEEeec
Confidence 4678889999999 999864
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.1e-28 Score=224.25 Aligned_cols=237 Identities=13% Similarity=0.057 Sum_probs=195.9
Q ss_pred CceeeEEEecCCCeEE-EecCCeEEEEECCCCc----eeeecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeC-CCcc
Q 014590 152 NAASLVDFDFDESKIV-GLIGTRICIWRRNGLR----SVFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDM-YSRK 224 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~-~~~~ 224 (422)
..+..++|+|++..|+ ++.|+.|++|++.++. ..........+..+++.+.+. .+++|+.||.|++||+ .+++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 3466799999999988 8899999999998766 322223334456778888888 8999999999999999 7775
Q ss_pred eeeeeec--CCccEEEEEecCCCEEEEEcCCCcEEEEeCCC---------Cccc------cceEeEEEecCCCEEEEEeC
Q 014590 225 CSQIIRM--HCAPVTSLSLSEDQLIISGSSLGSIAISGLSS---------DQRL------TGIKTLCYNPCSRLVFAGTT 287 (422)
Q Consensus 225 ~~~~~~~--~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~---------~~~~------~~v~~~~~~~~~~~l~~g~~ 287 (422)
. ..+.+ |...|.+++|+|++.+++++.|+.|++||+++ ++.+ ..|.+++|+|++ +++++.
T Consensus 92 ~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~ 168 (342)
T 1yfq_A 92 F-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMN 168 (342)
T ss_dssp E-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEES
T ss_pred e-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeC
Confidence 4 66778 99999999999988999999999999999987 5544 789999999887 999999
Q ss_pred CCeEEEEECCC-Cee--eeeeccCCCceeeeeeEec-CCCEEEEEecCCeEEEEECCCC------ceEEEeeecCCcccc
Q 014590 288 AGYASCWDLRT-MKS--LWETRISPNVVYSLQHLQN-DTSTLVVGGIDGVLRVLDQNTG------EVLSRCVMDIGSASS 357 (422)
Q Consensus 288 dg~i~iwd~~~-~~~--~~~~~~~~~~v~~l~~~s~-~~~~l~s~~~dg~v~vwd~~~~------~~~~~~~~~~~~~~~ 357 (422)
|+.|++||+++ +.. ......|...+.+++ |+| +++++++++.||.|++|++... +....+..|....
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~-- 245 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA-LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL-- 245 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSSCEEEEE-ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT--
T ss_pred CCeEEEEECCccccccceeeecCCCCceeEEE-ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc--
Confidence 99999999997 543 334456788999999 999 9999999999999999999876 6677776654310
Q ss_pred cCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 358 SSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 358 ~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
....|...|++++| ++++|++++.||.|++||+..++
T Consensus 246 -------------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 246 -------------------------KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp -------------------------TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred -------------------------cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 01246679999999 68999999999999999998764
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=239.32 Aligned_cols=245 Identities=15% Similarity=0.162 Sum_probs=187.0
Q ss_pred CCceeeEEEecCCCeEE-EecCCeEEEEECCCCce-------------eeecCC-----------CceeeeEEEeeeC--
Q 014590 151 PNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRS-------------VFPSRE-----------GTFMKGLCMRYFD-- 203 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~-------------~~~~~~-----------~~~~~~~~~~~~~-- 203 (422)
...+.+++|+|++.+|+ ++.||.|++|++.++.. .+..+. ...+..+++.+.+
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 35677799999999999 88999999999987652 233333 1235567777776
Q ss_pred CeEEEecCCCeEEEEeCCCccee---------------------------------------ee-eecCCccEEEEEecC
Q 014590 204 PEAVVGCEDGTARVFDMYSRKCS---------------------------------------QI-IRMHCAPVTSLSLSE 243 (422)
Q Consensus 204 ~~l~~~~~d~~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~l~~~~ 243 (422)
..+++++.|+.|++||+.+++.. .. ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 57999999999999998764432 12 357999999999998
Q ss_pred C-CEEEEEcCCCcEEEEeCCCCcc-----------c----cceEeEEEecCC-CEEEEEeCCCeEEEEECCCCee----e
Q 014590 244 D-QLIISGSSLGSIAISGLSSDQR-----------L----TGIKTLCYNPCS-RLVFAGTTAGYASCWDLRTMKS----L 302 (422)
Q Consensus 244 ~-~~l~s~~~dg~i~iwd~~~~~~-----------~----~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~----~ 302 (422)
+ +++++| .|+.|++||+++... . ..|.+++|+|++ +++++|+.||.|++||+++++. +
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 7 788888 899999999984321 1 679999999998 9999999999999999998876 6
Q ss_pred eeeccCCC------------ceeeeeeEecCCCEEEEEecCCeEEEEECCC-CceEEEeeecCCcccccCCCCCCeEEee
Q 014590 303 WETRISPN------------VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-GEVLSRCVMDIGSASSSSNKVSGVIERN 369 (422)
Q Consensus 303 ~~~~~~~~------------~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~s~d~~i~~~ 369 (422)
..+..|.. .|.+++ |+|++++|++++. +.|++||+++ ++++..+..|......+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l----------- 333 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL----------- 333 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH-----------
T ss_pred eEeccCCCccccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccc-----------
Confidence 77888875 899999 9999999999998 9999999997 88888887764311000
Q ss_pred eccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 370 EGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 370 ~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..... ...-..+..++| ++++|++|+.||.|++||+..++
T Consensus 334 --~~~~~--------~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 334 --CSLYE--------NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp --HHHHH--------TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred --ccccc--------ccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 00000 000012345777 68899999999999999998764
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.9e-29 Score=234.70 Aligned_cols=239 Identities=12% Similarity=0.133 Sum_probs=195.9
Q ss_pred eeEEeeccccceeEEEe-c-CC-eEEEEecCCeEEEEEcCCC-------eEEEeeeCCC-ceeeEEEecCC-CeEE-Eec
Q 014590 104 DIDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGY-------KCVEEYSLPN-AASLVDFDFDE-SKIV-GLI 170 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~-~~-~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~-~~~~~~~~~~~-~~l~-~~~ 170 (422)
.+..+.+|.+.|.+++| + ++ +|++|+.||+|++||+.++ +.+..+.+|. .+..++|+|++ ..++ ++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 34568899999999999 4 55 9999999999999999987 5567777664 45669999998 5777 889
Q ss_pred CCeEEEEECCCCceeeec---CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCcc-EEEEEecCC-
Q 014590 171 GTRICIWRRNGLRSVFPS---REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAP-VTSLSLSED- 244 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~l~~~~~- 244 (422)
|+.|++||+.+++.+... .....+..+++.+++..+++++.|+.|++||+++++.+..+ ..|.+. +.++.|+|+
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 999999999998765433 23334456777777888999999999999999999999888 688776 899999987
Q ss_pred CEEEEE---cCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEE-EeCCCeEEEEECCCCee-eeeecc--C
Q 014590 245 QLIISG---SSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFA-GTTAGYASCWDLRTMKS-LWETRI--S 308 (422)
Q Consensus 245 ~~l~s~---~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~-g~~dg~i~iwd~~~~~~-~~~~~~--~ 308 (422)
.++++| +.|+.|++||++++... ..+.+++|+|+++++++ |+.||.|++||+.++++ +..+.. |
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECC
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccccc
Confidence 677777 79999999999887652 67999999999999975 55799999999998774 444444 4
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
...|.+++ |+|++.++++ .++.+++|++.++++.
T Consensus 313 ~~~v~~~~-~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 313 KESQRGMG-YMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp SSCCSEEE-ECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred CCcccceE-Eeccccccee--cceeEEEEEcCCCcEE
Confidence 58999999 9999998764 5679999999876543
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.2e-27 Score=224.78 Aligned_cols=273 Identities=14% Similarity=0.096 Sum_probs=216.4
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEee-----eCCC-ceeeEEEecCCCeEE-EecCCe
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEY-----SLPN-AASLVDFDFDESKIV-GLIGTR 173 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~l~-~~~~~~ 173 (422)
..+..+..|. .+.+++| +++ ++++++.|+.|++||+.+++....+ ..|. .+..++|++++..++ ++.++.
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 3455565554 4558888 455 7788888999999999999888743 3333 355689999999888 778899
Q ss_pred EEEEECCCCceeeec-CCCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEE
Q 014590 174 ICIWRRNGLRSVFPS-REGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (422)
Q Consensus 174 i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~ 250 (422)
|++||+++++.+... ..+.....+++.++++.+ ++++.|+.|++||+++++.+..+..+ ..+.+++++|+ +.++++
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEE
Confidence 999999987654322 233344567777777776 56668999999999999988887754 45899999987 688887
Q ss_pred c--------CCCcEEEEeCCCCccc------cceEeEEEecCCCEE-EEEeCCCeEEEEECCCCeeeeeeccCCCceeee
Q 014590 251 S--------SLGSIAISGLSSDQRL------TGIKTLCYNPCSRLV-FAGTTAGYASCWDLRTMKSLWETRISPNVVYSL 315 (422)
Q Consensus 251 ~--------~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 315 (422)
+ .|+.|++||+.+++.. ..+.+++|+|+++.+ ++++.++.|++||+.+++.+..+. +...+.++
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~ 350 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTI 350 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeE
Confidence 7 5889999999988765 678899999999755 566889999999999998887775 56778999
Q ss_pred eeEecCCCEEEEEec---------------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccc
Q 014590 316 QHLQNDTSTLVVGGI---------------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCI 380 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~---------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~ 380 (422)
+ |+|++++|++++. ||.|++||+.+++.+..+..+
T Consensus 351 ~-~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~----------------------------- 400 (433)
T 3bws_A 351 A-LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG----------------------------- 400 (433)
T ss_dssp E-ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-----------------------------
T ss_pred E-EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-----------------------------
Confidence 9 9999999888876 579999999999888777541
Q ss_pred ccCCCCCCCCeEEEEe--cCEEEEEEeC-CCeEEEEEcc
Q 014590 381 DRIPKTIRPPITCLAV--GMKKVVTTHN-SKYIRLWKFN 416 (422)
Q Consensus 381 ~~~~~~h~~~v~~i~~--~~~~l~s~s~-Dg~i~iW~~~ 416 (422)
..+.+++| ++++|++++. |+.|++|+++
T Consensus 401 --------~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 401 --------NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp --------SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred --------CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 35788899 6788887764 9999999986
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.6e-28 Score=227.64 Aligned_cols=219 Identities=10% Similarity=0.039 Sum_probs=158.0
Q ss_pred ecCCCeEE-EecCCeEEEEECCCCcee----eecCCCcee--eeEEEee--------eCCeEEEecCCCeEEEEeCCCcc
Q 014590 160 DFDESKIV-GLIGTRICIWRRNGLRSV----FPSREGTFM--KGLCMRY--------FDPEAVVGCEDGTARVFDMYSRK 224 (422)
Q Consensus 160 ~~~~~~l~-~~~~~~i~~w~~~~~~~~----~~~~~~~~~--~~~~~~~--------~~~~l~~~~~d~~i~iwd~~~~~ 224 (422)
.+++..++ ++.|++|++||..++... +....+|.. ..+++++ ++..|++|+.|++|++||++++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 34555677 889999999999887532 333444433 3455554 45569999999999999998888
Q ss_pred eeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc--------------------------------cce
Q 014590 225 CSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL--------------------------------TGI 270 (422)
Q Consensus 225 ~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~--------------------------------~~v 270 (422)
++..+..|..+|.+++|+|+ .++++++.|++|++||+++++.. ..+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 88888889999999999986 58999999999999999887543 457
Q ss_pred EeEEEe-cCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeee------------------eEec-CCCEEEEEec
Q 014590 271 KTLCYN-PCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQ------------------HLQN-DTSTLVVGGI 330 (422)
Q Consensus 271 ~~~~~~-~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~------------------~~s~-~~~~l~s~~~ 330 (422)
.++.|+ |+++.+++++.|+.+++||+.+++....+..|...+..+. ++.+ ++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 788886 7999999999999999999998776666655554443332 1222 3446788889
Q ss_pred CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC
Q 014590 331 DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK 408 (422)
Q Consensus 331 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg 408 (422)
||.|++||+.+++....+..| ..+|++++| ||++|++++.||
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~------------------------------------~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQL------------------------------------GMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEEC------------------------------------SSCEEEEEECTTSSEEEEEESSE
T ss_pred CCEEEEEECCCCcEEEEecCC------------------------------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999887776553 458999999 799999999877
Q ss_pred eEEEEEc
Q 014590 409 YIRLWKF 415 (422)
Q Consensus 409 ~i~iW~~ 415 (422)
+.+|++
T Consensus 382 -v~lvrL 387 (393)
T 4gq1_A 382 -VLLTRL 387 (393)
T ss_dssp -EEEEEE
T ss_pred -eEEEEE
Confidence 555554
No 114
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=2.5e-28 Score=217.55 Aligned_cols=187 Identities=14% Similarity=0.219 Sum_probs=158.0
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCC--cceeeeeecCCccEEEEEecC---CCEEEEEcCCCcEEEEeCCCCcc--c
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYS--RKCSQIIRMHCAPVTSLSLSE---DQLIISGSSLGSIAISGLSSDQR--L 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~dg~i~iwd~~~~~~--~ 267 (422)
..+++++++..|++|+.|++|++||+.+ ++.+.++.+|.++|.+++|++ +++|++|+.|++|++||+++++. +
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~ 92 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence 3455666667799999999999999974 467889999999999999974 47999999999999999987742 1
Q ss_pred -------cceEeEEEecC--CCEEEEEeCCCeEEEEECCCCe--eeeeeccCCCceeeeeeEecC-------------CC
Q 014590 268 -------TGIKTLCYNPC--SRLVFAGTTAGYASCWDLRTMK--SLWETRISPNVVYSLQHLQND-------------TS 323 (422)
Q Consensus 268 -------~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~s~~-------------~~ 323 (422)
..|.+++|+|+ +.+|++|+.|+.|++||++++. ....+.+|...|.+++ |+|+ ++
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~-~~p~~~~~~~~~~~~~~~~ 171 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS-WAPATIEEDGEHNGTKESR 171 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEE-ECCCC------------CC
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEe-ecCCcccccccCCCCCCcc
Confidence 67999999997 8999999999999999998753 2456788999999999 9886 57
Q ss_pred EEEEEecCCeEEEEECCCCce----EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec--
Q 014590 324 TLVVGGIDGVLRVLDQNTGEV----LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG-- 397 (422)
Q Consensus 324 ~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~-- 397 (422)
+|++|+.|+.|++||+.+++. ...+ .+|...|.+++|+
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l------------------------------------~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQTYVLESTL------------------------------------EGHSDWVRDVAWSPT 215 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEE------------------------------------CCCSSCEEEEEECCC
T ss_pred eEEEEcCCCcEEEEEEcCCCceEEEEEEe------------------------------------cCCCCceEEEEECCC
Confidence 999999999999999987652 3333 3477799999993
Q ss_pred ---CEEEEEEeCCCeEEEEEccCC
Q 014590 398 ---MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 398 ---~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+.+|+|++.|++|++|+++.+
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCceEEEEEECCCcEEEEEeCCC
Confidence 389999999999999998764
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-30 Score=237.60 Aligned_cols=273 Identities=11% Similarity=0.051 Sum_probs=203.8
Q ss_pred EEeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCCCc
Q 014590 106 DQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR 183 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~ 183 (422)
+.++||...|.+++| |+| .++.+.+|+.+.. .+..+.+...+..++|+|+|..|+ ++.||.|++||.++..
T Consensus 46 ~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~-~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l 118 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE------FENKLDFELAQQN-GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKML 118 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSS-CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEE
T ss_pred ceecCCCccEEEEEECCCC------CcceEEEEeCCCc-eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCcee
Confidence 455899999999999 666 4555555554322 222333345567799999999999 9999999999966522
Q ss_pred eeeecCCCc----eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce-------eeee----ecCCccEEEEEecCCCEEE
Q 014590 184 SVFPSREGT----FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-------SQII----RMHCAPVTSLSLSEDQLII 248 (422)
Q Consensus 184 ~~~~~~~~~----~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~----~~~~~~v~~l~~~~~~~l~ 248 (422)
..+. +... .+..+++++++..|++|+.||+|++||+.+++. +.++ .+|.+.|.+++|+|++ ++
T Consensus 119 ~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-La 196 (588)
T 2j04_A 119 TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LV 196 (588)
T ss_dssp EECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EE
T ss_pred eecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EE
Confidence 2233 3321 467889999999999999999999999988753 5666 6677899999999998 99
Q ss_pred EEcCCCcEEEEeCCCCcc------c-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 249 SGSSLGSIAISGLSSDQR------L-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~------~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
+++.|++|++||+.++.. + ..|.+++|+ |+.+|+++ ++.|++||+.+++......+|...|..++
T Consensus 197 ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va- 272 (588)
T 2j04_A 197 AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIP- 272 (588)
T ss_dssp EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEE-
T ss_pred EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEE-
Confidence 999999999999987662 1 579999999 68999887 69999999998877444447999999999
Q ss_pred E--ecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 318 L--QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 318 ~--s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
| +|++..|+++++||+ ++|.... +...++...+++. |++++.|+.. .+ .+. ... +...|.+++
T Consensus 273 ~~~s~d~~~La~a~edG~-klw~~d~------~~~spd~~l~a~~--d~~v~lW~~~---g~-~l~-~~~-~~~~I~~va 337 (588)
T 2j04_A 273 LNHEKESTILLMSNKTSY-KVLLEDE------LHVTADNIIAPYL--EKKFKKWSTI---WN-EFN-NYE-TTLVIHGIS 337 (588)
T ss_dssp ETTCSSCEEEEECSSCEE-EEEESSS------EEEECCCSSHHHH--HHHHHHTTTT---TT-SSS-SSC-CEEEEEEEE
T ss_pred eeeCCCCCEEEEEcCCCC-EEEeecc------EEECCCceEEEEc--CCEEEEEECC---CC-cee-eec-cceEEEEEE
Confidence 9 999999999999999 9999872 2233333333332 6666654331 11 111 112 255699999
Q ss_pred e--cCEEEEEEeC
Q 014590 396 V--GMKKVVTTHN 406 (422)
Q Consensus 396 ~--~~~~l~s~s~ 406 (422)
| ||+.+|+++.
T Consensus 338 ~SPdG~~lA~~~~ 350 (588)
T 2j04_A 338 LSPDGYSIAIVYD 350 (588)
T ss_dssp ECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEEe
Confidence 9 7889998863
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.9e-28 Score=226.79 Aligned_cols=250 Identities=12% Similarity=0.079 Sum_probs=193.8
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCc---ee--eecCCC------------------------------------
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLR---SV--FPSREG------------------------------------ 191 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~---~~--~~~~~~------------------------------------ 191 (422)
...+++|+++|+.++++.++.|++||+.+++ .+ +..+..
T Consensus 6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred cEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 4667899999998888889999999998876 22 221110
Q ss_pred -----------------ceeeeEEEeeeCCeE-EEecCCCeEEEEeCC--Ccceeeeee--cCCccEEEEEecCC-CEEE
Q 014590 192 -----------------TFMKGLCMRYFDPEA-VVGCEDGTARVFDMY--SRKCSQIIR--MHCAPVTSLSLSED-QLII 248 (422)
Q Consensus 192 -----------------~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~l~~~~~-~~l~ 248 (422)
..+..++++++++.| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|+ .+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 165 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVI 165 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEE
Confidence 024566677777775 899999999999999 888888876 56789999999987 8999
Q ss_pred EEcCCCcEEEEeCCCCcc-------c----cceEeEEEecC---CCEEEEEeCCCeEEEEECCCCeeeee-eccCCCcee
Q 014590 249 SGSSLGSIAISGLSSDQR-------L----TGIKTLCYNPC---SRLVFAGTTAGYASCWDLRTMKSLWE-TRISPNVVY 313 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~-------~----~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~v~ 313 (422)
+|+.+|.+++|++.++.. + ..|.+++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|...|.
T Consensus 166 ~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 166 IADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp EEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred EEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceE
Confidence 999999999999877652 1 78999999999 99999999999999999999888877 568999999
Q ss_pred eeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEE
Q 014590 314 SLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITC 393 (422)
Q Consensus 314 ~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 393 (422)
+++ |+ ++++|++++.|+.|++||+.+++++..+..+.....++.......... .......+...|.+
T Consensus 246 ~~~-~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 246 SIC-CG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRF-----------QNENNDIIEFAVSK 312 (450)
T ss_dssp EEE-EC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------------------CBCCCEEE
T ss_pred EEE-EC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccc-----------cccccccceEEEEE
Confidence 999 88 999999999999999999999999988865432110000000000000 00000123457899
Q ss_pred EEe--cCEEEEEEe-CCCeEEEEEc
Q 014590 394 LAV--GMKKVVTTH-NSKYIRLWKF 415 (422)
Q Consensus 394 i~~--~~~~l~s~s-~Dg~i~iW~~ 415 (422)
++| ++++|++++ .|+.|++|++
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999 588999988 8999999999
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.5e-28 Score=221.03 Aligned_cols=235 Identities=12% Similarity=0.154 Sum_probs=191.9
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEE--ecCCCeEE-EecCCeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDF--DFDESKIV-GLIGTRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~-~~~~~~i~~w 177 (422)
.....+.+|.+.|.+++| +++ +|++|+.||.|++||+.+++.+....+...+..++| ++++..++ ++.|+.|++|
T Consensus 77 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 77 TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 344789999999999999 566 999999999999999999998887776677788999 88888888 8899999999
Q ss_pred ECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee--ecCCccEEEEEecCC-----CEEEEE
Q 014590 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII--RMHCAPVTSLSLSED-----QLIISG 250 (422)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~-----~~l~s~ 250 (422)
|+.+++.+....... ...++....+.+++++.++.+.+|+++........ ..+...+.++.+.++ ..++++
T Consensus 157 d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPE--RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp CSSCSSCSEEEECSS--CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred ECCCCcEEEEEecCC--CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence 998877543222222 35677777888999999999999999876433222 223345555555532 239999
Q ss_pred cCCCcEEEEeCCCCcc---c-------c------------ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC
Q 014590 251 SSLGSIAISGLSSDQR---L-------T------------GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~---~-------~------------~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 308 (422)
+.||.|++||++.... . . .|.+++|+|++++|++|+.||.|++||+.+++++..+.+|
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 314 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCC
Confidence 9999999999988743 1 1 6999999999999999999999999999999999999999
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
...|.+++ |+|++++|++++.|+..+.|++.
T Consensus 315 ~~~v~~~~-~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 315 DQPISACC-FNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp SSCEEEEE-ECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCCceEEE-ECCCCCeEEEEeccccccccccc
Confidence 99999999 99999999999998865555543
No 118
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=7.6e-28 Score=216.32 Aligned_cols=198 Identities=15% Similarity=0.165 Sum_probs=155.7
Q ss_pred eeEEeeccccceeEEEe-c--CC-eEEEEecCCeEEEEEcCCCe--EEEeeeCCC-ceeeEEEecCCCeEEEecCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-K--RG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPN-AASLVDFDFDESKIVGLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~--~~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~ 176 (422)
.+..|.+|.+.|.+++| + ++ +|+||+.|++|++||+.+++ ....+.+|. .+..++|+|++.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~------------ 116 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDY------------ 116 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTT------------
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCC------------
Confidence 56789999999999999 3 25 99999999999999998873 555665553 345577776521
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc---eeeeeecCCccEEEEEecCC---------
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK---CSQIIRMHCAPVTSLSLSED--------- 244 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~--------- 244 (422)
+..+++|+.|++|++||++++. ....+.+|...|.+++|+|+
T Consensus 117 --------------------------g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 117 --------------------------GLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp --------------------------CSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred --------------------------CcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 1226777777777777776542 23445677778888888764
Q ss_pred ---------CEEEEEcCCCcEEEEeCCCCc---cc-------cceEeEEEecCC----CEEEEEeCCCeEEEEECCCC--
Q 014590 245 ---------QLIISGSSLGSIAISGLSSDQ---RL-------TGIKTLCYNPCS----RLVFAGTTAGYASCWDLRTM-- 299 (422)
Q Consensus 245 ---------~~l~s~~~dg~i~iwd~~~~~---~~-------~~v~~~~~~~~~----~~l~~g~~dg~i~iwd~~~~-- 299 (422)
.++++|+.|++|++||++.+. .. ..|.+++|+|++ .+|++|+.|++|++||+.+.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS 250 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence 589999999999999997542 22 679999999987 89999999999999999862
Q ss_pred -e-eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 300 -K-SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 300 -~-~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
+ ....+..|...|++++ |+|++++|++++.||.|++|+..
T Consensus 251 ~~~~~~~~~~~~~~v~~v~-~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVS-WSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCBCCEEEECSSCEEEEE-ECTTTCCEEEEESSSCEEEEEEC
T ss_pred cchhhhhhhcCCCcEEEEE-EcCCCCEEEEEcCCCeEEEEEEC
Confidence 1 2234567889999999 99999999999999999999976
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.2e-27 Score=205.85 Aligned_cols=167 Identities=13% Similarity=0.028 Sum_probs=125.0
Q ss_pred CCeEEEEECCC-Cceee-ecCCCceeeeEEEee---eCCeEEEecCCCeEEEEeCCCcceeeeeecCC---ccEEEEEec
Q 014590 171 GTRICIWRRNG-LRSVF-PSREGTFMKGLCMRY---FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC---APVTSLSLS 242 (422)
Q Consensus 171 ~~~i~~w~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~l~~~ 242 (422)
|+.|++|++.. ++.+. ..........+++++ +++.|++|+.|++|+|||+.+|++++++.+|. ..+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 78888888844 43221 122333345677777 55779999999999999999999999998654 367778899
Q ss_pred CC-CEE------------EEEcCCCcEEEEeCCCCccccceEe-----------EEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 243 ED-QLI------------ISGSSLGSIAISGLSSDQRLTGIKT-----------LCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 243 ~~-~~l------------~s~~~dg~i~iwd~~~~~~~~~v~~-----------~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
|+ .++ ++|+.|++|++||..+++.+ .+.. +..+.++.++++|+.|++|+|||+.+
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l-~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSV-GVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEE-EEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEE-EEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCC
Confidence 87 443 67889999999999988753 1111 12222355789999999999999999
Q ss_pred CeeeeeeccCCCcee-eeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 299 MKSLWETRISPNVVY-SLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~-~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
++++.++.+|...+. +++ |+|||++|++|+.|++|+|||+
T Consensus 315 Gk~l~tL~gH~~~vvs~va-fSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 GQCTALLPPVSDQHWSFVK-WSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSEEEEECCC--CCCCEEE-ECSSSSEEEEECTTSCEEEEEE
T ss_pred CcEEEEecCCCCCeEEEEE-ECCCCCEEEEEECCCcEEEecC
Confidence 999999999987665 578 9999999999999999999995
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=9.8e-27 Score=211.27 Aligned_cols=246 Identities=16% Similarity=0.087 Sum_probs=179.5
Q ss_pred eeeEEeeccccceeEEEec---CC-eEEEEecCCeEEEEEcCCC---------eEEEeeeCCC-ceeeEEEecC--CCeE
Q 014590 103 IDIDQWKAHSVGVDQCRMK---RG-LILTGVGDKVMRLWSLEGY---------KCVEEYSLPN-AASLVDFDFD--ESKI 166 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~~---~~-~l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~-~~~~~~~~~~--~~~l 166 (422)
..+..+.+|.+.|.+++|. ++ +|++|+.||.|++||+.++ +.+..+..+. .+..++|+|+ +..+
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 4677889999999999993 35 9999999999999999887 5677776654 4566999999 9988
Q ss_pred E-EecCCeEEEEECCCCceee--e------------cCCCceeeeEEEeee---CCeEEEecCCCeEEEEeCCCcce--e
Q 014590 167 V-GLIGTRICIWRRNGLRSVF--P------------SREGTFMKGLCMRYF---DPEAVVGCEDGTARVFDMYSRKC--S 226 (422)
Q Consensus 167 ~-~~~~~~i~~w~~~~~~~~~--~------------~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~--~ 226 (422)
+ ++.|+.|++||+.+++.+. . .........+++.+. +..+++++.++.+.+|+...++. +
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 8 8999999999998765321 1 012223344555554 56699999999998888877764 6
Q ss_pred eeeecCCccEEEEEecCC-----CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEE----eCCCe
Q 014590 227 QIIRMHCAPVTSLSLSED-----QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAG----TTAGY 290 (422)
Q Consensus 227 ~~~~~~~~~v~~l~~~~~-----~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g----~~dg~ 290 (422)
..+.+|...|.+++|+|+ +++++++.||.|++||++++... ........++....+..+ .....
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 777889999999999987 58999999999999999876543 222333333333333333 33445
Q ss_pred EEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 291 ASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 291 i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+.+|+..+.+.+..+.+|...|++++ |+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVS-WNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEE-ECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred eeecccccccEEEEEecccccEEEEE-EcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 66777777788889999999999999 99999999999999999999999887665553
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=3.5e-25 Score=212.66 Aligned_cols=295 Identities=10% Similarity=0.025 Sum_probs=222.9
Q ss_pred cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEEC--CCCceeeecCCCceeee
Q 014590 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRR--NGLRSVFPSREGTFMKG 196 (422)
Q Consensus 121 ~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~--~~~~~~~~~~~~~~~~~ 196 (422)
+++ ++++++.|++|.+||..+++++.++..+.....++|+||+++++ ++.+++|.+||+ .+++.+.....+.....
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~ 226 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS 226 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcce
Confidence 456 88899999999999999999999998655577799999999998 888999999999 67665544344555567
Q ss_pred EEEee----eCCeEEEec-CCCeEEEEeCCCcceeeeeecC----------Cc-cEEEEEecCC--CEEEEEcCCCcEEE
Q 014590 197 LCMRY----FDPEAVVGC-EDGTARVFDMYSRKCSQIIRMH----------CA-PVTSLSLSED--QLIISGSSLGSIAI 258 (422)
Q Consensus 197 ~~~~~----~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~----------~~-~v~~l~~~~~--~~l~s~~~dg~i~i 258 (422)
+++++ +++.+++++ .+++|.+||..++++++.+..+ .. .+..+.++|+ .++++...++.|.+
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 78888 888888877 4899999999999988887642 22 6889999975 57778889999999
Q ss_pred EeCCCCccc--------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeecc----CCCceeeeeeEecC-CCE
Q 014590 259 SGLSSDQRL--------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRI----SPNVVYSLQHLQND-TST 324 (422)
Q Consensus 259 wd~~~~~~~--------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~~s~~-~~~ 324 (422)
||+.+++.+ ..+..++|+|+|+++++++ .+++|.+||+.+++++..+.. |.+... .+++|+ +..
T Consensus 307 vd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~--~~~~p~~g~~ 384 (543)
T 1nir_A 307 VNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA--NFVHPKYGPV 384 (543)
T ss_dssp EECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE--EEEETTTEEE
T ss_pred EEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc--ccCCCCCccE
Confidence 999876543 4577899999999877655 588999999999999887764 544332 235677 556
Q ss_pred EEEEe-cCCeEEEEECCC-------CceEEEeeecCCcccccCCCCCC-----------------eEEeeeccccCCCcc
Q 014590 325 LVVGG-IDGVLRVLDQNT-------GEVLSRCVMDIGSASSSSNKVSG-----------------VIERNEGRRLSAGCC 379 (422)
Q Consensus 325 l~s~~-~dg~v~vwd~~~-------~~~~~~~~~~~~~~~~~~~s~d~-----------------~i~~~~~~~~~~~~~ 379 (422)
++++. .|++|.+||+.+ +++++++..+......+..++|+ +|.+++.......
T Consensus 385 ~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-- 462 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK-- 462 (543)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC--
T ss_pred EEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC--
Confidence 67765 589999999998 89999999887765555555555 3333333322211
Q ss_pred cccC-------CCCCCCCeEEEEe--cCEEEEEE-----eCCCeEEEEEccCCC
Q 014590 380 IDRI-------PKTIRPPITCLAV--GMKKVVTT-----HNSKYIRLWKFNYSD 419 (422)
Q Consensus 380 ~~~~-------~~~h~~~v~~i~~--~~~~l~s~-----s~Dg~i~iW~~~~~~ 419 (422)
...+ ...+...+..++| +|+.+..+ +.|+.|.|||..+++
T Consensus 463 ~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 463 YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 0111 1345678899999 57766654 258999999998764
No 122
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-26 Score=211.72 Aligned_cols=206 Identities=17% Similarity=0.236 Sum_probs=166.0
Q ss_pred cceeeEEeeccccceeEEEe-cC--C-eEEEEecCCeEEEEEcCCCe--EEEeeeCC-CceeeEEEecCCCeEEEecCCe
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLP-NAASLVDFDFDESKIVGLIGTR 173 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~--~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~ 173 (422)
....+..+.+|.+.|.+++| ++ + +|++|+.||.|++||+.+++ .+..+..+ ..+..++|+|+..
T Consensus 44 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------- 114 (379)
T 3jrp_A 44 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY--------- 114 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG---------
T ss_pred cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCC---------
Confidence 34567789999999999999 44 5 99999999999999999987 55555544 3344466666510
Q ss_pred EEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecC--------
Q 014590 174 ICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSE-------- 243 (422)
Q Consensus 174 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~-------- 243 (422)
+..+++++.|+.|++||+.++. ....+..|...|.+++|+|
T Consensus 115 -----------------------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 115 -----------------------------GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp -----------------------------CSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred -----------------------------CCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 2337788888888888887763 3445678999999999998
Q ss_pred -----C-CEEEEEcCCCcEEEEeCCCCccc-----------cceEeEEEecC---CCEEEEEeCCCeEEEEECCCCe---
Q 014590 244 -----D-QLIISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPC---SRLVFAGTTAGYASCWDLRTMK--- 300 (422)
Q Consensus 244 -----~-~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~--- 300 (422)
+ .++++++.||.|++||++++... ..|.+++|+|+ +++|++++.||.|++||++++.
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 245 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW 245 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc
Confidence 4 89999999999999999876532 78999999999 8999999999999999999863
Q ss_pred --eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 301 --SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 301 --~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
.+.....|...|++++ |+|++++|++++.||.|++|++..+...
T Consensus 246 ~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 246 KKTLLKEEKFPDVLWRAS-WSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEESSSSCCSSCEEEEE-ECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred eeeeeccccCCCcEEEEE-EcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 2333345888999999 9999999999999999999999855443
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5.5e-27 Score=217.24 Aligned_cols=228 Identities=14% Similarity=0.078 Sum_probs=162.1
Q ss_pred ccccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEE-----eeeCCC-ceeeEEEec--------CCCeEE-EecCC
Q 014590 110 AHSVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVE-----EYSLPN-AASLVDFDF--------DESKIV-GLIGT 172 (422)
Q Consensus 110 ~H~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~-----~~~~~~-~~~~~~~~~--------~~~~l~-~~~~~ 172 (422)
+|...+....++ ++ +|++|+.|++|+|||..+++... .+.+|. .+..++|+| |++.|+ ++.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344444444553 33 89999999999999999886543 344554 456699998 788898 89999
Q ss_pred eEEEEECCCCcee--eecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeee---------------------
Q 014590 173 RICIWRRNGLRSV--FPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQI--------------------- 228 (422)
Q Consensus 173 ~i~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~--------------------- 228 (422)
+|++||+.++..+ ...+.... ..+++.+.++ .|++|+.|++|++||+++++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v-~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPG-ISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCE-EEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred eEEEEECCCCceeeeecCCCCCc-EEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999876643 34444443 3566666554 599999999999999988754322
Q ss_pred ----eecCCccEEEEEec-CC-CEEEEEcCCCcEEEEeCCCCccc-------------------------cceEeEEEec
Q 014590 229 ----IRMHCAPVTSLSLS-ED-QLIISGSSLGSIAISGLSSDQRL-------------------------TGIKTLCYNP 277 (422)
Q Consensus 229 ----~~~~~~~v~~l~~~-~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------------~~v~~~~~~~ 277 (422)
..+|...+.++.|. ++ ..+++++.|+++++||+..++.. .......++|
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 23577788899987 55 89999999999999999876543 1112233333
Q ss_pred --CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 278 --CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 278 --~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++.++++|+.||.|++||+.+++....+..|...|.+++ |+|+|++||+++.+| +.+|.+.
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sva-fspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFC-WHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEE-ECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEE-EcCCCCEEEEEeCCC-eEEEEEe
Confidence 344677888999999999999998888888999999999 999999999998777 6666543
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3e-25 Score=208.32 Aligned_cols=231 Identities=14% Similarity=0.154 Sum_probs=192.7
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEE-Ee-cCCeEEEEECCC
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GL-IGTRICIWRRNG 181 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~ 181 (422)
.+.+|.+.|.+++| +++ ++++++.|+.|++||+.+++.+..+..+. .+..++|+|+++.++ ++ .++.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 45689999999999 456 89999999999999999999998887654 456699999999885 44 689999999998
Q ss_pred CceeeecCCCceeeeEEEeeeCCeEEEec--------CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-C-EEEEEc
Q 014590 182 LRSVFPSREGTFMKGLCMRYFDPEAVVGC--------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGS 251 (422)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-~l~s~~ 251 (422)
++.+...........+++.+++..+++++ .|+.|++||+.+++.+..+ .|...+.+++|+|+ + .+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 244 KLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp TEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEET
T ss_pred CcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEec
Confidence 87654444444456677777788888877 5889999999998877765 35668899999987 4 567779
Q ss_pred CCCcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeC---------------CCeEEEEECCCCeeeeeeccCCC
Q 014590 252 SLGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTT---------------AGYASCWDLRTMKSLWETRISPN 310 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~---------------dg~i~iwd~~~~~~~~~~~~~~~ 310 (422)
.|+.|++||+.+++.. ..+.+++|+|+|+++++++. ||.|++||+.+++.+..+..+ .
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~ 401 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-N 401 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-S
T ss_pred CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-C
Confidence 9999999999988765 67899999999999998876 579999999999998888764 5
Q ss_pred ceeeeeeEecCCCEEEEEec-CCeEEEEECC
Q 014590 311 VVYSLQHLQNDTSTLVVGGI-DGVLRVLDQN 340 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~ 340 (422)
.+.+++ |+|++++|++++. |+.|++|++.
T Consensus 402 ~~~~~~-~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 402 QPTGLD-VSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SEEEEE-ECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCceEE-EcCCCCEEEEEECCCCeEEEEEec
Confidence 689999 9999999988775 9999999986
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-25 Score=204.03 Aligned_cols=222 Identities=10% Similarity=0.046 Sum_probs=175.1
Q ss_pred ccceeEEEecCCeEEEEecCCeEEEEEcC---------CCeEEEeeeCC--CceeeEEEec--CCCeEE-EecCCeEEEE
Q 014590 112 SVGVDQCRMKRGLILTGVGDKVMRLWSLE---------GYKCVEEYSLP--NAASLVDFDF--DESKIV-GLIGTRICIW 177 (422)
Q Consensus 112 ~~~v~~v~~~~~~l~s~~~dg~v~iwd~~---------~~~~~~~~~~~--~~~~~~~~~~--~~~~l~-~~~~~~i~~w 177 (422)
...|.++.+.+. +++|+.|++|++|+.. +++.+..+... ..+..++++| +++.++ ++.|++|++|
T Consensus 76 ~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 76 TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 456777777544 9999999999999665 55555555533 3467799999 999999 8999999999
Q ss_pred ECCCCceee--ecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCccee-eeeec-CCccEEEEEecCC-CEEEEEcC
Q 014590 178 RRNGLRSVF--PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-QIIRM-HCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 178 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~-~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
|+.+++... .......+..+++.+++..+++|+.||.|++||+++++.+ ..+.. |.++|.+++|+|+ .++++++
T Consensus 155 d~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~- 233 (343)
T 3lrv_A 155 SYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC- 233 (343)
T ss_dssp ESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-
T ss_pred ECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-
Confidence 999887642 2333434667788888888999999999999999999887 78887 9999999999987 7888888
Q ss_pred CCcEEEEeCCCCccc----------cce--EeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 253 LGSIAISGLSSDQRL----------TGI--KTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 253 dg~i~iwd~~~~~~~----------~~v--~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
|+.|++||+++++.. ..+ .+++|+|+|++|++++. |+.|++|++.+....... .++..+. |+
T Consensus 234 ~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~-~~ 308 (343)
T 3lrv_A 234 DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALC-LQ 308 (343)
T ss_dssp SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECC-C-
T ss_pred CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEe-cC
Confidence 559999999988764 122 25999999999999998 999999999765544333 5567777 87
Q ss_pred c---CCCEEEEEecCCeEEEEECC
Q 014590 320 N---DTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 320 ~---~~~~l~s~~~dg~v~vwd~~ 340 (422)
+ +.+.+++++.||.+.++-..
T Consensus 309 ~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 309 SDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp ---CCCCEEEEEEETTEEEEEEEC
T ss_pred ccccccceeEEEecCCceEEEEec
Confidence 7 88899999999999988543
No 126
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=8.1e-25 Score=205.24 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=162.6
Q ss_pred ceeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeE-------EEeeeCCC-ceeeEEEecCCCeEEEec
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKC-------VEEYSLPN-AASLVDFDFDESKIVGLI 170 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~l~~~~ 170 (422)
...+..+.+|...|.+++| +++ +|++|+.||.|++||+.++.. ...+..|. .+..++|+|+
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-------- 242 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-------- 242 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS--------
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC--------
Confidence 4567889999999999999 333 899999999999999987321 12222222 2223444442
Q ss_pred CCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc---ceeeeeecCCccEEEEEecCC--C
Q 014590 171 GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR---KCSQIIRMHCAPVTSLSLSED--Q 245 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~--~ 245 (422)
.+..+++++.|+.|++||++++ +.+..+..|...|++++|+|+ .
T Consensus 243 -------------------------------~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 291 (430)
T 2xyi_A 243 -------------------------------HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF 291 (430)
T ss_dssp -------------------------------CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT
T ss_pred -------------------------------CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC
Confidence 2233788889999999999877 577778899999999999986 4
Q ss_pred EEEEEcCCCcEEEEeCCCCcc-c-------cceEeEEEecCCC-EEEEEeCCCeEEEEECCC--------------Ceee
Q 014590 246 LIISGSSLGSIAISGLSSDQR-L-------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRT--------------MKSL 302 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~-~-------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~--------------~~~~ 302 (422)
++++|+.||.|++||+++... + ..|.+++|+|+++ ++++++.||.|++||+.. .+.+
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 371 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 371 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEE
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceE
Confidence 799999999999999998443 3 7899999999995 799999999999999986 3566
Q ss_pred eeeccCCCceeeeeeEecCCC-EEEEEecCCeEEEEECCCC
Q 014590 303 WETRISPNVVYSLQHLQNDTS-TLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~-~l~s~~~dg~v~vwd~~~~ 342 (422)
..+.+|...|++++ |+|+++ +|++++.||.|+||++...
T Consensus 372 ~~~~~h~~~v~~~~-~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 372 FIHGGHTAKISDFS-WNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EECCCCSSCEEEEE-ECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEcCCCCCCceEEE-ECCCCCCEEEEEECCCCEEEeEcccc
Confidence 77888999999999 999999 9999999999999998753
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.9e-25 Score=221.48 Aligned_cols=203 Identities=17% Similarity=0.255 Sum_probs=166.4
Q ss_pred ceeeEEeeccccceeEEEe-cC--C-eEEEEecCCeEEEEEcCCCe--EEEeeeCCC-ceeeEEEecCCCeEEEecCCeE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLPN-AASLVDFDFDESKIVGLIGTRI 174 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~--~-~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i 174 (422)
...+..+.+|.++|.+++| ++ + +|++|+.||.|++||+.+++ .+..+..+. .+..++|+|++
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~----------- 111 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE----------- 111 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-----------
T ss_pred CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCC-----------
Confidence 4567889999999999999 44 5 99999999999999999886 555555443 34446666651
Q ss_pred EEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc--eeeeeecCCccEEEEEecC---------
Q 014590 175 CIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSE--------- 243 (422)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~--------- 243 (422)
.+..+++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 112 ---------------------------~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 112 ---------------------------YGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ---------------------------GCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred ---------------------------CCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 02337888888888888887763 3455678999999999998
Q ss_pred -----CCEEEEEcCCCcEEEEeCCCCccc-----------cceEeEEEecC---CCEEEEEeCCCeEEEEECCCCe----
Q 014590 244 -----DQLIISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPC---SRLVFAGTTAGYASCWDLRTMK---- 300 (422)
Q Consensus 244 -----~~~l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~---- 300 (422)
+..+++|+.||.|++||++++... ..|.+++|+|+ ++++++|+.||.|++||+++++
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 244 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK 244 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce
Confidence 379999999999999999877432 78999999999 8999999999999999999864
Q ss_pred -eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 301 -SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 301 -~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
.......|...|++++ |+|++++|++|+.||.|++||+.++.
T Consensus 245 ~~~~~~~~~~~~v~~l~-~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 245 KTLLKEEKFPDVLWRAS-WSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCBSSSSCCSSCCCCEE-ECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred eEEeccCCCCCceEEEE-EcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 3344556889999999 99999999999999999999998543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.7e-23 Score=195.04 Aligned_cols=266 Identities=11% Similarity=0.021 Sum_probs=196.5
Q ss_pred cccceeEEEe-cCC--eEEEEe----cCC----eEEEEEc--CCCeEE--EeeeCCCc-eeeEEEec-------------
Q 014590 111 HSVGVDQCRM-KRG--LILTGV----GDK----VMRLWSL--EGYKCV--EEYSLPNA-ASLVDFDF------------- 161 (422)
Q Consensus 111 H~~~v~~v~~-~~~--~l~s~~----~dg----~v~iwd~--~~~~~~--~~~~~~~~-~~~~~~~~------------- 161 (422)
+...+....| +.| ++++|+ .|| .|++||+ .+++++ ..+..+.. ...+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 3446666677 455 777886 467 9999999 898877 34655533 22244433
Q ss_pred -CCCeEE-EecC------CeEEEEECCCCce-eeecCCCceeeeEEEeeeCCeEEEecCCC---eEEEEeCCCcceeeee
Q 014590 162 -DESKIV-GLIG------TRICIWRRNGLRS-VFPSREGTFMKGLCMRYFDPEAVVGCEDG---TARVFDMYSRKCSQII 229 (422)
Q Consensus 162 -~~~~l~-~~~~------~~i~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~ 229 (422)
.+..++ ++.+ +.|++||+++... .+..+.+ .+...++++++..+++++.++ .|++||+.+++.. .+
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~-~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCC-cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 255555 4443 7999999986543 3333433 345678888888899998875 9999999988775 46
Q ss_pred ecCCccEEEEEecCC-CEEE-EEcCCCc--EEEEeCCCCccc------cceEeEEEecCCCEEEEEeC-CC--eEEEEEC
Q 014590 230 RMHCAPVTSLSLSED-QLII-SGSSLGS--IAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTT-AG--YASCWDL 296 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~-~~l~-s~~~dg~--i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~-dg--~i~iwd~ 296 (422)
..|...+.+++|+|+ +.++ +++.++. |++||+.+++.. ..+.+++|+|||++|++++. ++ .|++||+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 668889999999998 6566 6666655 999999887654 67899999999999998886 44 6888899
Q ss_pred CCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC---CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccc
Q 014590 297 RTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID---GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRR 373 (422)
Q Consensus 297 ~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~ 373 (422)
.+++. ..+..+...+.+++ |+|+|++|++++.+ +.|++||+.+++.. .+..
T Consensus 299 ~~~~~-~~l~~~~~~~~~~~-~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~----------------------- 352 (415)
T 2hqs_A 299 NGGAP-QRITWEGSQNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS----------------------- 352 (415)
T ss_dssp TSSCC-EECCCSSSEEEEEE-ECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC-----------------------
T ss_pred CCCCE-EEEecCCCcccCeE-ECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecC-----------------------
Confidence 87764 34556677888998 99999999988864 58999999987763 3322
Q ss_pred cCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCC---eEEEEEccCC
Q 014590 374 LSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSK---YIRLWKFNYS 418 (422)
Q Consensus 374 ~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg---~i~iW~~~~~ 418 (422)
| ..+.+++| |+++|++++.|+ .|.+||++.+
T Consensus 353 -------------~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 353 -------------T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp -------------S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred -------------C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 1 26778888 688888888877 7999998754
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.1e-23 Score=192.40 Aligned_cols=242 Identities=13% Similarity=0.050 Sum_probs=183.3
Q ss_pred EEeeccccceeEEEec----------------CCeEEEEecC------CeEEEEEcCCCeEEEeeeC-CCceeeEEEecC
Q 014590 106 DQWKAHSVGVDQCRMK----------------RGLILTGVGD------KVMRLWSLEGYKCVEEYSL-PNAASLVDFDFD 162 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~----------------~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~ 162 (422)
..+.+|...+..+++. ++.++.++.+ +.|++||+..+. ...+.. ...+..++|+||
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCC
Confidence 5688999888887763 4466666654 799999998544 444443 445677999999
Q ss_pred CCeEE-EecCC---eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEE-EecCCC--eEEEEeCCCcceeeeeecCCcc
Q 014590 163 ESKIV-GLIGT---RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDG--TARVFDMYSRKCSQIIRMHCAP 235 (422)
Q Consensus 163 ~~~l~-~~~~~---~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~--~i~iwd~~~~~~~~~~~~~~~~ 235 (422)
|+.|+ ++.++ .|++||+.+++..............++++++..|+ +++.++ .|++||+.+++. ..+..|...
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~ 268 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN 268 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc
Confidence 99998 66664 99999999887543222233455678888888776 666655 499999988776 556678889
Q ss_pred EEEEEecCC-CEEEEEcC-CC--cEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCC---CeEEEEECCCCeee
Q 014590 236 VTSLSLSED-QLIISGSS-LG--SIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTA---GYASCWDLRTMKSL 302 (422)
Q Consensus 236 v~~l~~~~~-~~l~s~~~-dg--~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~ 302 (422)
+.+++|+|+ +.+++++. ++ .|.+||+.+++.. ..+.+++|+|+|++|++++.+ ..|++||+.+++..
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 999999987 67777765 44 6788898877643 668899999999999988764 58999999988764
Q ss_pred eeeccCCCceeeeeeEecCCCEEEEEecCC---eEEEEECCCCceEEEeeecCC
Q 014590 303 WETRISPNVVYSLQHLQNDTSTLVVGGIDG---VLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 303 ~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~ 353 (422)
.+..+. .+.+++ |+|+|++|++++.++ .|++||+. +.....+..+.+
T Consensus 349 -~l~~~~-~~~~~~-~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~ 398 (415)
T 2hqs_A 349 -VLSSTF-LDETPS-LAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDG 398 (415)
T ss_dssp -ECCCSS-SCEEEE-ECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSS
T ss_pred -EecCCC-CcCCeE-EcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCC
Confidence 455554 788998 999999999988877 89999987 556666655433
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=5.2e-23 Score=186.09 Aligned_cols=253 Identities=9% Similarity=-0.010 Sum_probs=194.4
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCC---ceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCc------
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGT------ 192 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~------ 192 (422)
++++++.++.|.+||+.+++.+..+..+. ....++|+|+++.++ ...++.|.+||+.+++.+.....+.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 78999999999999999999999888765 567799999998765 4457899999998877543222111
Q ss_pred eeeeEEEeeeCCeEEEec------------CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEE
Q 014590 193 FMKGLCMRYFDPEAVVGC------------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAIS 259 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iw 259 (422)
....+.+.+++..++++. .++.|.+||+.+++.+..+.. ...+.+++|+|+ ++++++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 334567777788877775 579999999999888877764 445778999987 666666 6899999
Q ss_pred eCCCCccc------cceEeEEEecCCCEEEEEeCCC------------------------eEEEEECCCCeee-eeeccC
Q 014590 260 GLSSDQRL------TGIKTLCYNPCSRLVFAGTTAG------------------------YASCWDLRTMKSL-WETRIS 308 (422)
Q Consensus 260 d~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg------------------------~i~iwd~~~~~~~-~~~~~~ 308 (422)
|+.+++.. .....+.|+|++..++..+..+ .|.+||+.+++.. ..+..+
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 99988765 1123447889988766554322 4789999988764 234456
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCC
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIR 388 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~ 388 (422)
...+.+++ |+|++++++++ ++.|.+||+.+++.+..+..+
T Consensus 240 ~~~~~~~~-~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~------------------------------------- 279 (337)
T 1pby_B 240 DVFYFSTA-VNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP------------------------------------- 279 (337)
T ss_dssp SSCEEEEE-ECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-------------------------------------
T ss_pred CCceeeEE-ECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-------------------------------------
Confidence 66788898 99999999988 799999999998887776432
Q ss_pred CCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 389 PPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 389 ~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+.+++| ++++|++++.|+.|.+||+.+++
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 24567788 67888888999999999998764
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=4.6e-22 Score=179.65 Aligned_cols=263 Identities=13% Similarity=0.097 Sum_probs=190.9
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCce-eeecCCCceeee-EEE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRS-VFPSREGTFMKG-LCM 199 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~-~~~~~~~~~~~~-~~~ 199 (422)
.+++++.++.|.+||..+++.+..+..+.....++|+|+++.++ ++ .++.|.+||+.+++. ......+..... +++
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 68888899999999999999988887654444899999999776 44 478999999988775 322222222234 778
Q ss_pred eeeCCeEEEecCCC---eEEEEeCCCcceeeeeecCCccEEEEEecCC-C-EEEEEcCCCc-EEEEeCCCCccc------
Q 014590 200 RYFDPEAVVGCEDG---TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSSLGS-IAISGLSSDQRL------ 267 (422)
Q Consensus 200 ~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-~l~s~~~dg~-i~iwd~~~~~~~------ 267 (422)
.+++..++++..++ .|.+||+.+++.+..+..+ ....+++|+|+ + ++++...++. +.+|++.....+
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 88888888665553 9999999999988877654 44689999987 4 4555566688 999998653221
Q ss_pred -----cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCee---eeeeccCCCceeeeeeEecCCCEEEEEe-cCCeEEEE
Q 014590 268 -----TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKS---LWETRISPNVVYSLQHLQNDTSTLVVGG-IDGVLRVL 337 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~s~~~~~l~s~~-~dg~v~vw 337 (422)
..+..++|+|+|+++++++ .++.|.+||+.+++. +..+..+ ..+..++ |+|+|++|+.++ .++.|.+|
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~-~spdg~~l~v~~~~~~~i~~~ 248 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIV-VSRDGSTVYVLTESTVDVFNF 248 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEE-ECTTSSEEEEECSSEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEE-ECCCCCEEEEEEcCCCEEEEE
Confidence 5678999999999665554 689999999998887 7666654 5678898 999999776554 57889999
Q ss_pred ECCCCce--EEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEE-EEeCCCeEEE
Q 014590 338 DQNTGEV--LSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVV-TTHNSKYIRL 412 (422)
Q Consensus 338 d~~~~~~--~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~-s~s~Dg~i~i 412 (422)
|+.+++. +..+..+.. . ..........++| |+++|+ ++..++.|.+
T Consensus 249 d~~~~~~~~~~~~~~~~~--------------------~---------~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 299 (331)
T 3u4y_A 249 NQLSGTLSFVKSFGHGLL--------------------I---------DPRPLFGANQMALNKTETKLFISANISRELKV 299 (331)
T ss_dssp ETTTTEEEEEEEEECCCC--------------------C---------CCGGGTTCCCEEECTTSSEEEEEETTTTEEEE
T ss_pred ECCCCceeeecccccccc--------------------c---------CCCCcccccceEECCCCCEEEEecCCCCcEEE
Confidence 9998876 443332100 0 0000112255777 677665 5556679999
Q ss_pred EEccCC
Q 014590 413 WKFNYS 418 (422)
Q Consensus 413 W~~~~~ 418 (422)
||+..+
T Consensus 300 ~d~~~~ 305 (331)
T 3u4y_A 300 FTISGK 305 (331)
T ss_dssp EETTSC
T ss_pred EEecCC
Confidence 998764
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=3.9e-21 Score=175.08 Aligned_cols=237 Identities=9% Similarity=0.029 Sum_probs=186.1
Q ss_pred cccceeEEEe-cCC-eEEEEec-------CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEEC
Q 014590 111 HSVGVDQCRM-KRG-LILTGVG-------DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRR 179 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~ 179 (422)
....+..+++ +++ ++++++. ++.|.+||..+++.+..+........++++++++.++ ...++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 4456788888 565 6666663 5789999999999999888776677799999999765 445799999999
Q ss_pred CCCceee--ecCCCc--------eeeeEEEeeeCCeEEEec--CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CE
Q 014590 180 NGLRSVF--PSREGT--------FMKGLCMRYFDPEAVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL 246 (422)
Q Consensus 180 ~~~~~~~--~~~~~~--------~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~ 246 (422)
.+++.+. ....+. ....+.+.+++..++++. .++.|.+||..+++.+..+..+...+..++++|+ +.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 9887542 222111 134567777888766655 5789999999999988888756666888999987 78
Q ss_pred EEEEcCCCcEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeC-CCeEEEEECCCCeeeeeeccCCCceee
Q 014590 247 IISGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLRTMKSLWETRISPNVVYS 314 (422)
Q Consensus 247 l~s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~ 314 (422)
+++++.++.|.+||+.+++.. ..+..++|+|+|+++++++. ++.|.+||+.+++.+..+..+.. ..
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~ 276 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LA 276 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CC
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ce
Confidence 888889999999999988765 24667999999998877765 48999999999988877765432 56
Q ss_pred eeeEecCCCEEEEEe-cCCeEEEEECCCCceEEEeee
Q 014590 315 LQHLQNDTSTLVVGG-IDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 315 l~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~ 350 (422)
++ |+|++++++.++ .++.|.+||..+++.+..+..
T Consensus 277 ~~-~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 277 VL-FNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp EE-EETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EE-ECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec
Confidence 87 999999665555 689999999999988877754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=6e-22 Score=198.71 Aligned_cols=234 Identities=9% Similarity=-0.012 Sum_probs=177.7
Q ss_pred ccceeEEEe-cCC-eEEEEec-CC-----eEEEEEcCCCeEEEeeeCCC-------------------------ceeeEE
Q 014590 112 SVGVDQCRM-KRG-LILTGVG-DK-----VMRLWSLEGYKCVEEYSLPN-------------------------AASLVD 158 (422)
Q Consensus 112 ~~~v~~v~~-~~~-~l~s~~~-dg-----~v~iwd~~~~~~~~~~~~~~-------------------------~~~~~~ 158 (422)
...|.+++| +|| +|++++. |+ .|++||+.+++....+..+. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999 577 8999988 88 99999999998777665432 145699
Q ss_pred EecCCCeEEEecCCeEEEEECCCC---ceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCcc
Q 014590 159 FDFDESKIVGLIGTRICIWRRNGL---RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP 235 (422)
Q Consensus 159 ~~~~~~~l~~~~~~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 235 (422)
|+|||+.|+...++.|.+||+.++ ...............++++++..|+.++ ++.|++||+.+++.......+...
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccc
Confidence 999999999555699999999987 4332222233455778888898888877 469999999988776655444332
Q ss_pred ----------------EEEEEecCC-CEEEEEcCCC---------------------------------cEEEEeCCC-C
Q 014590 236 ----------------VTSLSLSED-QLIISGSSLG---------------------------------SIAISGLSS-D 264 (422)
Q Consensus 236 ----------------v~~l~~~~~-~~l~s~~~dg---------------------------------~i~iwd~~~-~ 264 (422)
+..++|+|| +.|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 477999988 7788877665 789999988 6
Q ss_pred ccc---------cceEeEEEecCCCEEEEEeC-----CCeEEEEECCCCeeeeeeccCCC----ceeeeeeEecCCCEEE
Q 014590 265 QRL---------TGIKTLCYNPCSRLVFAGTT-----AGYASCWDLRTMKSLWETRISPN----VVYSLQHLQNDTSTLV 326 (422)
Q Consensus 265 ~~~---------~~v~~~~~~~~~~~l~~g~~-----dg~i~iwd~~~~~~~~~~~~~~~----~v~~l~~~s~~~~~l~ 326 (422)
+.. ..+..++| |||++|++++. +..|++||+.+++....+..+.. .+.+++ |+|||++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~-~spdg~~~~ 352 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR-FLDDGSILW 352 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE-ECTTSCEEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE-ECCCCeEEE
Confidence 643 45789999 99999997764 56799999999887766665543 456888 999999999
Q ss_pred EEecCCeEEEEECC-CCceEEEee
Q 014590 327 VGGIDGVLRVLDQN-TGEVLSRCV 349 (422)
Q Consensus 327 s~~~dg~v~vwd~~-~~~~~~~~~ 349 (422)
+++.||.++||.+. ++. ...+.
T Consensus 353 ~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp EECTTSSCEEEEECSSSC-EEESC
T ss_pred EecCCCccEEEEEcCCCC-eeeee
Confidence 99999988888765 344 44443
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2.3e-21 Score=175.71 Aligned_cols=254 Identities=11% Similarity=0.139 Sum_probs=176.2
Q ss_pred eEEEEecCCeEEEEEcC-CC--eEEEeeeCCCceeeEEEecCCCeEE-EecC-CeEEEEECC--CCce--eeecCCCcee
Q 014590 124 LILTGVGDKVMRLWSLE-GY--KCVEEYSLPNAASLVDFDFDESKIV-GLIG-TRICIWRRN--GLRS--VFPSREGTFM 194 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-~~i~~w~~~--~~~~--~~~~~~~~~~ 194 (422)
.+++++.|+.|++||+. ++ +.+..+.....+..++|+|+++.++ ++.+ +.|.+|+++ ++.. +.........
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 86 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC
Confidence 45555789999999995 34 4555666666677799999999887 5555 999999997 4442 2111112244
Q ss_pred eeEEEeeeCCeEEEec-CCCeEEEEeC---CCcceeeeeecCCccEEEEEecCC-CEEEEEc-CCCcEEEEeCCC-Ccc-
Q 014590 195 KGLCMRYFDPEAVVGC-EDGTARVFDM---YSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGSIAISGLSS-DQR- 266 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~-~d~~i~iwd~---~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~dg~i~iwd~~~-~~~- 266 (422)
..+++.+++..+++++ .++.|.+||+ .+++....+..+ ..+.+++|+|+ +.+++++ .++.|.+||+.+ ++.
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 5677888888765554 5899999999 444455555543 45788999987 6666665 899999999987 533
Q ss_pred -----c------cceEeEEEecCCCEEEEEe-CCCeEEEEECCC--Cee--eeeec---cC---CCceeeeeeEecCCCE
Q 014590 267 -----L------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRT--MKS--LWETR---IS---PNVVYSLQHLQNDTST 324 (422)
Q Consensus 267 -----~------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~--~~~--~~~~~---~~---~~~v~~l~~~s~~~~~ 324 (422)
. ..+..++|+|+++++++++ .++.|.+||+.. ++. ..... .. ...+..++ |+|++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~s~dg~~ 244 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH-ITPDGRH 244 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE-ECTTSSE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE-ECCCCCE
Confidence 1 4678899999999776555 789999999953 332 22222 11 23566788 9999998
Q ss_pred EE-EEecCCeEEEEECC--CCc--eEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--c
Q 014590 325 LV-VGGIDGVLRVLDQN--TGE--VLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--G 397 (422)
Q Consensus 325 l~-s~~~dg~v~vwd~~--~~~--~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~ 397 (422)
|+ ++..++.|.+||+. +++ .+..+.. + ..+.+++| +
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~------------------------------------~-~~~~~~~~s~d 287 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPT------------------------------------E-TQPRGFNVDHS 287 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEEC------------------------------------S-SSCCCEEECTT
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecC------------------------------------C-CccceEEECCC
Confidence 77 45579999999997 332 2222221 1 12667788 5
Q ss_pred CEEEEEEe-CCCeEEEEEcc
Q 014590 398 MKKVVTTH-NSKYIRLWKFN 416 (422)
Q Consensus 398 ~~~l~s~s-~Dg~i~iW~~~ 416 (422)
+++|++++ .|+.|.+|+++
T Consensus 288 g~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 288 GKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSEEEEECTTTCEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEEEc
Confidence 77777776 68999999765
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=2.8e-21 Score=185.59 Aligned_cols=262 Identities=13% Similarity=0.061 Sum_probs=195.9
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEc--CCCeEEEeeeCCCceeeEEEec----CCCeEE-Ee-cC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSL--EGYKCVEEYSLPNAASLVDFDF----DESKIV-GL-IG 171 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~----~~~~l~-~~-~~ 171 (422)
+..+.++..+.. +.+++| ++| +|++++.|++|++||+ .+++++.++..+.....++|+| ||++++ ++ .+
T Consensus 169 ~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 169 KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 345667773333 888989 577 9999999999999999 8999999998877778899999 999988 44 58
Q ss_pred CeEEEEECCCCceee--ecC----------CCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceee--eeecCCccE
Q 014590 172 TRICIWRRNGLRSVF--PSR----------EGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQ--IIRMHCAPV 236 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~v 236 (422)
++|.+||..+.+.+. ... .+.....+.++++++. +++...++.|.+||..+++.+. .+. +...+
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~ 326 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFL 326 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSC
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCc
Confidence 999999998877542 211 1212334555555555 7788889999999998876544 333 55678
Q ss_pred EEEEecCC-CEEE-EEcCCCcEEEEeCCCCccc-----cce----EeEE-EecC-CCEEEEEe-CCCeEEEEECCC----
Q 014590 237 TSLSLSED-QLII-SGSSLGSIAISGLSSDQRL-----TGI----KTLC-YNPC-SRLVFAGT-TAGYASCWDLRT---- 298 (422)
Q Consensus 237 ~~l~~~~~-~~l~-s~~~dg~i~iwd~~~~~~~-----~~v----~~~~-~~~~-~~~l~~g~-~dg~i~iwd~~~---- 298 (422)
..+.|+|+ ++++ ++..+++|.+||+.+++.+ +.. .... ++|+ +..++++. .|++|.+||+.+
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 88999987 6555 4556899999999998876 100 1222 4677 55666665 579999999998
Q ss_pred ---CeeeeeeccCCCceeeeeeEecCCCEEEEEe-------cCCeEEEEECCCCceE-EEe--------eecCCcccccC
Q 014590 299 ---MKSLWETRISPNVVYSLQHLQNDTSTLVVGG-------IDGVLRVLDQNTGEVL-SRC--------VMDIGSASSSS 359 (422)
Q Consensus 299 ---~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~-------~dg~v~vwd~~~~~~~-~~~--------~~~~~~~~~~~ 359 (422)
++.+.++.+|.+.+..++ ++|++++|++++ .+++|.|||+.+++.. ..+ ..+...+..+.
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~-~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 485 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIK-THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE 485 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEE-CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEE
T ss_pred hhcCeEEEEEEcCCCCceEEE-cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEecc
Confidence 889999999988889999 999999999987 3779999999998877 443 22334455566
Q ss_pred CCCCCeE
Q 014590 360 NKVSGVI 366 (422)
Q Consensus 360 ~s~d~~i 366 (422)
+++||..
T Consensus 486 ~~~~g~~ 492 (543)
T 1nir_A 486 YNKRGDE 492 (543)
T ss_dssp ECSSSSE
T ss_pred CCCCCCE
Confidence 6666654
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.2e-21 Score=173.55 Aligned_cols=217 Identities=12% Similarity=0.066 Sum_probs=164.2
Q ss_pred EEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCC-Ccee--eecCCCceeeeEEEeeeC
Q 014590 127 TGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG-LRSV--FPSREGTFMKGLCMRYFD 203 (422)
Q Consensus 127 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~-~~~~--~~~~~~~~~~~~~~~~~~ 203 (422)
+++.|+.|++||+.+++..........+..++|+|+++.++.+.++.|.+||+.+ ++.. ...+.......+++++++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 4567899999999999888766666677889999999999966799999999998 6543 223323445567888888
Q ss_pred CeEEEec--CC--CeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE-EEcCCCcEEEEeC--CCCccc------cc
Q 014590 204 PEAVVGC--ED--GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSLGSIAISGL--SSDQRL------TG 269 (422)
Q Consensus 204 ~~l~~~~--~d--~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~-s~~~dg~i~iwd~--~~~~~~------~~ 269 (422)
..+++++ .+ ..|..++..+++ ...+..+ ..+..++|+|+ +.++ +++.++.+.+|++ .++... ..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 8888887 33 445555555554 3444433 34889999987 5555 7888999999985 333332 67
Q ss_pred eEeEEEecCCCEEEEEe-CCCeEEEEECC-CCeeeeeeccCCCceeeeeeEecCCCEEEEEecC-----------CeEEE
Q 014590 270 IKTLCYNPCSRLVFAGT-TAGYASCWDLR-TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID-----------GVLRV 336 (422)
Q Consensus 270 v~~~~~~~~~~~l~~g~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-----------g~v~v 336 (422)
+.+++|+|+|+++++++ .++.+.+|++. .+..+..+..|...+.+++ |+|++++|++++.+ +.|++
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH-PSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEE-ECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeE-ECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 89999999999888766 58889999886 4566677777888899998 99999999988876 57999
Q ss_pred EECCCCceEE
Q 014590 337 LDQNTGEVLS 346 (422)
Q Consensus 337 wd~~~~~~~~ 346 (422)
||+.+++...
T Consensus 254 ~d~~~~~~~~ 263 (297)
T 2ojh_A 254 MDMDGGNVET 263 (297)
T ss_dssp EETTSCSCEE
T ss_pred EecCCCCcee
Confidence 9998876533
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=4e-21 Score=191.67 Aligned_cols=267 Identities=10% Similarity=0.089 Sum_probs=196.1
Q ss_pred cceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCC-----Cceee
Q 014590 113 VGVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG-----LRSVF 186 (422)
Q Consensus 113 ~~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~-----~~~~~ 186 (422)
..|.+++|+ |+.++.+ .|+.|++||+.+++..........+..++|+|||+.++...++.|++|++.+ ++...
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEE
Confidence 569999994 5655544 4699999999998877666555556679999999999977889999999988 65432
Q ss_pred --ecCCCce-------------eeeEEEeeeCCeEEEec---------------------------------CCCeEEEE
Q 014590 187 --PSREGTF-------------MKGLCMRYFDPEAVVGC---------------------------------EDGTARVF 218 (422)
Q Consensus 187 --~~~~~~~-------------~~~~~~~~~~~~l~~~~---------------------------------~d~~i~iw 218 (422)
....... .....+++++..|++++ .+..|.+|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 2122211 35778889999888887 45789999
Q ss_pred eCCCcceeeeee--cCCccEEEEEecCC-CEEEEEcCCC-----cEEEEeCCCCccc------------cceEeEEEec-
Q 014590 219 DMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSSLG-----SIAISGLSSDQRL------------TGIKTLCYNP- 277 (422)
Q Consensus 219 d~~~~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~dg-----~i~iwd~~~~~~~------------~~v~~~~~~~- 277 (422)
|+.+++...... .|...+.+++|+|+ +.+++++.++ .|.+||+.+++.. ..+..++|+|
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 241 HLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp ETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 999887654442 46678999999988 6788877665 8999999988322 1246789999
Q ss_pred -CCCEEEEEeCCCeEEEEECC-CCeeeeeeccCCCceee-eeeEecCCCEEEEEec-CC----eEEEEECCCCceEEEee
Q 014590 278 -CSRLVFAGTTAGYASCWDLR-TMKSLWETRISPNVVYS-LQHLQNDTSTLVVGGI-DG----VLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 278 -~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~-l~~~s~~~~~l~s~~~-dg----~v~vwd~~~~~~~~~~~ 349 (422)
+|++++++..++.+.+|++. ++..+..+..|...+.+ ++ |+|+++.|+.++. ++ .|..||+.+++ ...+.
T Consensus 321 ~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~-~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~ 398 (706)
T 2z3z_A 321 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAG-FDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT 398 (706)
T ss_dssp CSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEE-ECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC
T ss_pred CCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeE-EcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc
Confidence 99999999999999999876 56777778778777877 67 9999998766554 44 67777777654 22221
Q ss_pred ecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCC----CeEEEEEccCCC
Q 014590 350 MDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNS----KYIRLWKFNYSD 419 (422)
Q Consensus 350 ~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~D----g~i~iW~~~~~~ 419 (422)
|...+.+++| |+++|+.++.+ +.|.+||+..++
T Consensus 399 -------------------------------------~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 399 -------------------------------------PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp -------------------------------------CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred -------------------------------------CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 2235677777 56666655333 468899886653
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=4.8e-21 Score=198.85 Aligned_cols=270 Identities=10% Similarity=-0.030 Sum_probs=211.4
Q ss_pred eeEEeeccccceeEEEecCC-eEEEEecCCeEEEEEcCC-CeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCC
Q 014590 104 DIDQWKAHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEG-YKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG 181 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~~~~-~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~ 181 (422)
....+.+|.+.+.++.|.++ ++++++.|+.++||.+.. +.....+..+......+|+|||+.++...++.|.+|++.+
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~ 274 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDT 274 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTT
T ss_pred CeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCc
Confidence 45567899999999999655 777888899999998753 4444555555556678999999999966799999999954
Q ss_pred CceeeecCC------------CceeeeEEEe-eeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-cEEEEEecCC-CE
Q 014590 182 LRSVFPSRE------------GTFMKGLCMR-YFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA-PVTSLSLSED-QL 246 (422)
Q Consensus 182 ~~~~~~~~~------------~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~-~~ 246 (422)
.... .... ......++++ +++..+++++ ++.|.+|+..+++... +..|.. .+..++|+ + +.
T Consensus 275 ~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~ 350 (1045)
T 1k32_A 275 EKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVA 350 (1045)
T ss_dssp CCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEE
T ss_pred eEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCe
Confidence 3322 1111 1134567888 8888888877 7899999998776544 556777 89999999 7 67
Q ss_pred EEEEcCCCcEE-EEeCCCCccc------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEe
Q 014590 247 IISGSSLGSIA-ISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ 319 (422)
Q Consensus 247 l~s~~~dg~i~-iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s 319 (422)
+++++.++.+. +||+.+++.. ..+..++|+|||++|++++.++.|++||+.+++......+|.+.+.+++ |+
T Consensus 351 l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~-~S 429 (1045)
T 1k32_A 351 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFT-IS 429 (1045)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEE-EC
T ss_pred EEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceE-EC
Confidence 88888888888 9998776543 6788999999999999999999999999999988877778888999999 99
Q ss_pred cCCCEEEEEecCC----------eEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCC
Q 014590 320 NDTSTLVVGGIDG----------VLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRP 389 (422)
Q Consensus 320 ~~~~~l~s~~~dg----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~ 389 (422)
|||++|++++.++ .|++||+.+++ ...+.. |..
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~------------------------------------~~~ 472 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT------------------------------------ENS 472 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC------------------------------------SSS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC------------------------------------CCc
Confidence 9999999887654 89999999876 444433 234
Q ss_pred CeEEEEe--cCEEEEEEeCCCeEEEEEc
Q 014590 390 PITCLAV--GMKKVVTTHNSKYIRLWKF 415 (422)
Q Consensus 390 ~v~~i~~--~~~~l~s~s~Dg~i~iW~~ 415 (422)
.+.+++| ||++|++++.++...+|+.
T Consensus 473 ~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp BEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ccCCceEcCCCCEEEEEecccCCcCcch
Confidence 5667777 6888888888887777764
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=4.9e-21 Score=198.76 Aligned_cols=230 Identities=13% Similarity=0.138 Sum_probs=177.8
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC------------ceeeEEEe-cCCCeEEE
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN------------AASLVDFD-FDESKIVG 168 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~------------~~~~~~~~-~~~~~l~~ 168 (422)
..+.+.+|.. +...+| ++| +|+++ .++.|.+||+...+. ..+..+. .+..++|+ |||+.++.
T Consensus 237 ~~~~l~~~~~-~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~ 313 (1045)
T 1k32_A 237 DLRKHTSFTD-YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAF 313 (1045)
T ss_dssp SCEECCCCCS-SCEEEEEESSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEE
T ss_pred cceEecCCCC-cceeeEcCCCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEE
Confidence 4456666653 566777 577 77776 589999999955443 3554422 45679999 99999985
Q ss_pred ecCCeEEEEECCCCceee-ecCCCceeeeEEEeeeCCeEEEecCCCeEE-EEeCCCcceeeeeecCCccEEEEEecCC-C
Q 014590 169 LIGTRICIWRRNGLRSVF-PSREGTFMKGLCMRYFDPEAVVGCEDGTAR-VFDMYSRKCSQIIRMHCAPVTSLSLSED-Q 245 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~ 245 (422)
..++.+.+|++.++.... ..+.+.......+. ++..++.++.++.+. +||+.+++.... ..|...+..++|+|+ +
T Consensus 314 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 314 VSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp EETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSS
T ss_pred EEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCC
Confidence 558999999998776432 22333234445555 556688888888888 999987765444 378889999999988 8
Q ss_pred EEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCC----------eEEEEECCCCeeeeeeccC
Q 014590 246 LIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAG----------YASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg----------~i~iwd~~~~~~~~~~~~~ 308 (422)
.+++++.++.|++||+.+++.. ..+.+++|+|||++|++++.++ .|++||+.+++ +..+..|
T Consensus 392 ~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~ 470 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTE 470 (1045)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCS
T ss_pred EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCC
Confidence 8999999999999999988765 5678999999999999887654 89999999887 6677788
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
...+.+++ |+|+|++|+.++.++...+|+..
T Consensus 471 ~~~~~~~~-~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 471 NSHDYAPA-FDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp SSBEEEEE-ECTTSCEEEEEESCCCCCEECSS
T ss_pred CcccCCce-EcCCCCEEEEEecccCCcCcchh
Confidence 88889998 99999999999988877777654
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.7e-20 Score=168.24 Aligned_cols=241 Identities=14% Similarity=0.047 Sum_probs=181.8
Q ss_pred eeeEEeec-ccc-ceeEEEe-cCC-e-EEEEecCCeEEEEEcCCCeEEEeeeCCC------ceeeEEEecCCCeEE-Ee-
Q 014590 103 IDIDQWKA-HSV-GVDQCRM-KRG-L-ILTGVGDKVMRLWSLEGYKCVEEYSLPN------AASLVDFDFDESKIV-GL- 169 (422)
Q Consensus 103 ~~~~~l~~-H~~-~v~~v~~-~~~-~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~-~~- 169 (422)
..+..+.. +.. .+..++| +++ + +++++.++.|.+||+.+++.+..+.... ....++|+|+++.++ +.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEec
Confidence 44555542 322 4788999 566 4 4566678999999999999888877543 456699999999888 43
Q ss_pred -----------cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC--ccE
Q 014590 170 -----------IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC--APV 236 (422)
Q Consensus 170 -----------~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~v 236 (422)
.++.|.+||+.+++.+.....+.....+++.+++..++++ ++.|.+||+.+++....+..+. .+
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~- 178 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE- 178 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT-
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC-
Confidence 5799999999987754333333334566788888877777 6889999999998877765443 32
Q ss_pred EEEEecCC-CEEEEEc-CCC-----------------------cEEEEeCCCCccc--------cceEeEEEecCCCEEE
Q 014590 237 TSLSLSED-QLIISGS-SLG-----------------------SIAISGLSSDQRL--------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 237 ~~l~~~~~-~~l~s~~-~dg-----------------------~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~ 283 (422)
+.++|+ ..++..+ .++ .|.+||+.+++.. ..+.+++|+|+|++++
T Consensus 179 --~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 256 (337)
T 1pby_B 179 --TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256 (337)
T ss_dssp --TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred --ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEE
Confidence 256765 4333332 222 4689999888653 4577899999999999
Q ss_pred EEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 284 AGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 284 ~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
++ ++.|.+||+.+++.+..+..+ ..+.+++ |+|++++|++++.++.|.+||+.+++.+..+..+.
T Consensus 257 ~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~-~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 257 GA--YNVLESFDLEKNASIKRVPLP-HSYYSVN-VSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EE--ESEEEEEETTTTEEEEEEECS-SCCCEEE-ECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred Ee--CCeEEEEECCCCcCcceecCC-CceeeEE-ECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 88 689999999999888777654 4578898 99999999999999999999999999998887653
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=9.3e-20 Score=165.06 Aligned_cols=233 Identities=11% Similarity=0.062 Sum_probs=168.6
Q ss_pred eccccceeEEEe-cCC-eEEEEecC-CeEEEEEcC--CCe--EEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEEC
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGD-KVMRLWSLE--GYK--CVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRR 179 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~d-g~v~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~ 179 (422)
..|...+.+++| +++ +|++++.+ +.|.+|++. +++ .+..+..+.....++|+|+++.++ ++ .++.|.+||+
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 457888999999 566 78888876 999999997 554 445666555667799999999886 44 4789999999
Q ss_pred CCC---ceeeecCCCceeeeEEEeeeCCeEEEec-CCCeEEEEeCCC-cceee----eeec-CCccEEEEEecCC-CEE-
Q 014590 180 NGL---RSVFPSREGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYS-RKCSQ----IIRM-HCAPVTSLSLSED-QLI- 247 (422)
Q Consensus 180 ~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~----~~~~-~~~~v~~l~~~~~-~~l- 247 (422)
..+ ..............+++.+++..+++++ .++.|.+||+.+ ++... .+.. ....+..++|+|+ +++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 422 2222222233345677888888777666 899999999987 65432 2222 3347888999987 545
Q ss_pred EEEcCCCcEEEEeCCC--Cccc---------------cceEeEEEecCCCEEEEEe-CCCeEEEEECC----CCeeeeee
Q 014590 248 ISGSSLGSIAISGLSS--DQRL---------------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLR----TMKSLWET 305 (422)
Q Consensus 248 ~s~~~dg~i~iwd~~~--~~~~---------------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~----~~~~~~~~ 305 (422)
+++..++.|.+||+.. ++.. ..+..++|+|+|++++++. .++.|.+||+. +.+.+..+
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 4555899999999953 3321 2455799999999887554 78999999998 23455555
Q ss_pred ccCCCceeeeeeEecCCCEEEEEe-cCCeEEEEE--CCCCc
Q 014590 306 RISPNVVYSLQHLQNDTSTLVVGG-IDGVLRVLD--QNTGE 343 (422)
Q Consensus 306 ~~~~~~v~~l~~~s~~~~~l~s~~-~dg~v~vwd--~~~~~ 343 (422)
..+.. +.+++ |+|++++|++++ .++.|.+|+ ..+++
T Consensus 274 ~~~~~-~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 274 PTETQ-PRGFN-VDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp ECSSS-CCCEE-ECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred cCCCc-cceEE-ECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 55544 88898 999999888887 689999994 44554
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=7.8e-21 Score=185.22 Aligned_cols=224 Identities=15% Similarity=0.078 Sum_probs=164.9
Q ss_pred ccceeEEEe-cCC-eEEEEec-CCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE-Eec---CCeEEEE--EC--
Q 014590 112 SVGVDQCRM-KRG-LILTGVG-DKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLI---GTRICIW--RR-- 179 (422)
Q Consensus 112 ~~~v~~v~~-~~~-~l~s~~~-dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---~~~i~~w--~~-- 179 (422)
..+|.+++| +|| .||+++. ||+++||++.+++.......+ ..+...+|+|| +.++ +.. +....+| +.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 446999999 687 8888877 999999999887776655555 35566889998 5555 433 3445555 44
Q ss_pred CCCceeeecCCCceeeeEEEeeeCCe--EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC---
Q 014590 180 NGLRSVFPSREGTFMKGLCMRYFDPE--AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL--- 253 (422)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d--- 253 (422)
.+....+....+. ...+++++++. +++++.+ .+.+||+.+++.......+. .+++|+|+ +.+++++.+
T Consensus 100 ~g~~~~l~~~~~~--~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 100 PGEEQRLEAVKPM--RILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTCCEECTTSCSB--EEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT
T ss_pred CCccccccCCCCc--eeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC
Confidence 3333322223333 35688888865 4444444 45599998887665554333 78899987 788877776
Q ss_pred -CcEEEEeCCCCccc------cceEeEEEecCCCEEEEEeCCC--eEEEEECCCCeeeeeeccCCCceeeee-------e
Q 014590 254 -GSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAGTTAG--YASCWDLRTMKSLWETRISPNVVYSLQ-------H 317 (422)
Q Consensus 254 -g~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~-------~ 317 (422)
+.|++||+.+++.. ..+..++|+|||+.|+++..++ .|++||+.+++.. .+..|...+..++ .
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccccee
Confidence 78999999887765 6689999999999999888888 8999999988877 7777766655443 1
Q ss_pred EecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 318 LQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 318 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
|+|||..+++++.||.+++|++ |+..
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred EcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 8899999999999999999999 6544
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=1.2e-19 Score=163.75 Aligned_cols=240 Identities=11% Similarity=0.011 Sum_probs=173.7
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEec-CCeEEEEEcCCCeE-EEeeeCCCceee-EEEecCCCeEEEecCC----
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVG-DKVMRLWSLEGYKC-VEEYSLPNAASL-VDFDFDESKIVGLIGT---- 172 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~~~~~---- 172 (422)
+..+..+..+...+ +++| ++| ++++++. ++.|.+||+.+++. ...+..+..... ++|+|+++.++++.++
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 108 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPF 108 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSC
T ss_pred cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcc
Confidence 34556666666677 8999 566 5665555 89999999999987 777777766777 9999999998844443
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEE-ecCCCe-EEEEeCCCccee----eeeecCCccEEEEEecCC-C
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVV-GCEDGT-ARVFDMYSRKCS----QIIRMHCAPVTSLSLSED-Q 245 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~-i~iwd~~~~~~~----~~~~~~~~~v~~l~~~~~-~ 245 (422)
.|.+||+.+++.+.....+.....+++.+++..+++ ...++. |.+|++.....+ ............++|+|+ +
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred cEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 899999998875543333333457788888876544 455577 999998754322 111233456789999987 5
Q ss_pred -EEEEEcCCCcEEEEeCCCCcc---c------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCee--eeeeccC----
Q 014590 246 -LIISGSSLGSIAISGLSSDQR---L------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKS--LWETRIS---- 308 (422)
Q Consensus 246 -~l~s~~~dg~i~iwd~~~~~~---~------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~--~~~~~~~---- 308 (422)
+++++..++.|.+||+.+++. + ..+..++|+|+|++++++. .++.|.+||+.+++. +..+..+
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC
Confidence 455566789999999998887 4 6778899999999877665 477899999998876 3333222
Q ss_pred CCc---eeeeeeEecCCCEEEEEe-cCCeEEEEECCCCc
Q 014590 309 PNV---VYSLQHLQNDTSTLVVGG-IDGVLRVLDQNTGE 343 (422)
Q Consensus 309 ~~~---v~~l~~~s~~~~~l~s~~-~dg~v~vwd~~~~~ 343 (422)
... ...++ |+|++++|++++ .++.|.+||+....
T Consensus 269 ~~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 269 PRPLFGANQMA-LNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CGGGTTCCCEE-ECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCcccccceE-ECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 222 24578 999999886555 56799999997543
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=3.9e-20 Score=168.05 Aligned_cols=227 Identities=11% Similarity=0.084 Sum_probs=175.1
Q ss_pred EEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCC--ceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCC-
Q 014590 118 CRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSRE- 190 (422)
Q Consensus 118 v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~- 190 (422)
+++. ++ ++++++.++.|.+||+.+++.+..+..+. ....++++|+++.++ ...++.|.+||+.+++.+.....
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 4453 44 88999999999999999999998888766 567799999998765 44679999999998875432221
Q ss_pred ------CceeeeEEEeeeCCeEEEecCC------------CeEEEEeCCCcce---eeeeecCCccEEEEEecCCCEEEE
Q 014590 191 ------GTFMKGLCMRYFDPEAVVGCED------------GTARVFDMYSRKC---SQIIRMHCAPVTSLSLSEDQLIIS 249 (422)
Q Consensus 191 ------~~~~~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~~~~~l~s 249 (422)
+.....++++++++.+++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+..+++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEE
Confidence 2224567788888888888765 8999999988543 33343 334688899998733665
Q ss_pred EcCCCcEEEEeCCCCccc-----c--------------------------------------------------------
Q 014590 250 GSSLGSIAISGLSSDQRL-----T-------------------------------------------------------- 268 (422)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~-----~-------------------------------------------------------- 268 (422)
++. .|.+||+.+++.. .
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 543 4999999877644 1
Q ss_pred --------------ceEeEEEec-CCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCe
Q 014590 269 --------------GIKTLCYNP-CSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGV 333 (422)
Q Consensus 269 --------------~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~ 333 (422)
.+..++++| ++++++++ ++.|.+||+.+++.+..+..+ ..+.+++ |+|++++|++++.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~-~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVA-FDKKGDKLYLGGTFND 317 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEE-ECSSSSCEEEESBSSE
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceE-ECCCCCEEEEecCCCe
Confidence 234566779 99999988 889999999999888777643 4477898 9999998888889999
Q ss_pred EEEEECCCCceEEEeeec
Q 014590 334 LRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 334 v~vwd~~~~~~~~~~~~~ 351 (422)
|.+||+.+++.+..+...
T Consensus 318 v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEETTTTEEEEEEECS
T ss_pred EEEEeccccceeeeeecC
Confidence 999999999998888664
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1.2e-20 Score=188.32 Aligned_cols=247 Identities=9% Similarity=0.014 Sum_probs=165.5
Q ss_pred ccccceeeEEeeccccceeEEEecCCeEEEEecCCeEEEEEcCCCeE--EEeeeCC-----------------CceeeEE
Q 014590 98 LEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKC--VEEYSLP-----------------NAASLVD 158 (422)
Q Consensus 98 ~~~~~~~~~~l~~H~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~-----------------~~~~~~~ 158 (422)
+..++.....|..+. +..+.|.++.+++++.|+ | +||+.+++. ...+... ..+..++
T Consensus 13 ~~~~~~~~~~~~~~~--~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~ 88 (706)
T 2z3z_A 13 LMPGGKEFYNFYPEY--VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTL 88 (706)
T ss_dssp -----------------CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEE
T ss_pred ccCCccccccccccc--CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEE
Confidence 344555555565553 444556545777777787 8 999999987 3333321 3466799
Q ss_pred EecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-----cceeeeeecCC
Q 014590 159 FDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-----RKCSQIIRMHC 233 (422)
Q Consensus 159 ~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~ 233 (422)
|+|| ..++.+.++.+++||+.+++..............++++++..++++ .++.|++||+.+ ++.......+.
T Consensus 89 ~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 89 DAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp ETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred ECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC
Confidence 9999 7777667799999999988754322223334567888888888885 679999999988 77665544443
Q ss_pred cc--------------EEEEEecCC-CEEEEEc---------------------------------CCCcEEEEeCCCCc
Q 014590 234 AP--------------VTSLSLSED-QLIISGS---------------------------------SLGSIAISGLSSDQ 265 (422)
Q Consensus 234 ~~--------------v~~l~~~~~-~~l~s~~---------------------------------~dg~i~iwd~~~~~ 265 (422)
.. +.++.|+|+ ++|++++ .+..|.+||+.+++
T Consensus 167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 167 ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 33 478999988 7888876 44679999998876
Q ss_pred cc---------cceEeEEEecCCCEEEEEeCCC-----eEEEEECCCCeeeeeec-c-CCC---ceeeeeeEec--CCCE
Q 014590 266 RL---------TGIKTLCYNPCSRLVFAGTTAG-----YASCWDLRTMKSLWETR-I-SPN---VVYSLQHLQN--DTST 324 (422)
Q Consensus 266 ~~---------~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~-~-~~~---~v~~l~~~s~--~~~~ 324 (422)
.. ..+.+++|+|||+.|++++.++ .|++||+.+++....+. . +.. .+.++. |+| +|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-~sp~~dg~~ 325 (706)
T 2z3z_A 247 TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT-FLPGSNNQF 325 (706)
T ss_dssp EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE-ECTTCSSEE
T ss_pred eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce-eecCCCCEE
Confidence 43 4588999999999999987765 89999999883333332 2 222 246778 999 9999
Q ss_pred EEEEecCCeEEEEECC-CCceEEEeeec
Q 014590 325 LVVGGIDGVLRVLDQN-TGEVLSRCVMD 351 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~-~~~~~~~~~~~ 351 (422)
+++++.||.+++|++. ++..+..+..+
T Consensus 326 l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEEccCCccEEEEEECCCCEEEecCCC
Confidence 9999999999999875 56666666443
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=7.4e-21 Score=190.23 Aligned_cols=222 Identities=10% Similarity=0.008 Sum_probs=165.0
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc----eeeEEEecCCCeEE-EecC---------CeEEEE
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFDESKIV-GLIG---------TRICIW 177 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~-~~~~---------~~i~~w 177 (422)
.+.+++| +|| ++++ +.||+|++||+.+++....+..+.. +..++|+|||+.|+ ++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4677888 577 6655 7899999999999988887776653 67799999999998 5443 789999
Q ss_pred ECCCCcee-eecCCCc--eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccE------------------
Q 014590 178 RRNGLRSV-FPSREGT--FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV------------------ 236 (422)
Q Consensus 178 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v------------------ 236 (422)
|+.+++.. +....++ .....++++++..|+.++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 99987642 2222222 2446778888888888876 799999999888776655444333
Q ss_pred EEEEecCC-CEEEEEcCCC----------------------------------cEEEEeCCCCccc-------------c
Q 014590 237 TSLSLSED-QLIISGSSLG----------------------------------SIAISGLSSDQRL-------------T 268 (422)
Q Consensus 237 ~~l~~~~~-~~l~s~~~dg----------------------------------~i~iwd~~~~~~~-------------~ 268 (422)
.+++|+|+ +.|++++.|+ .|++||+.+++.. .
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 78999998 7888876543 7999999887742 3
Q ss_pred ceEeEEEecCCCEEEEEeC----CCeEEEEECCCCeeeeeecc-CCCcee----eeeeEecCCCEEEE--EecCC-----
Q 014590 269 GIKTLCYNPCSRLVFAGTT----AGYASCWDLRTMKSLWETRI-SPNVVY----SLQHLQNDTSTLVV--GGIDG----- 332 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~-~~~~v~----~l~~~s~~~~~l~s--~~~dg----- 332 (422)
.+..++|+|||+++++... +..|++||+.+++....+.. +...+. .++ |+|||+.|+. +..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPV-FSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCE-ECTTSCSEEEEEEECCSSSSCE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCce-EcCCCCeEEEEEecccCCCcce
Confidence 5778999999998877653 35799999999887665543 334443 777 9999997765 44566
Q ss_pred -eEEEEE
Q 014590 333 -VLRVLD 338 (422)
Q Consensus 333 -~v~vwd 338 (422)
.|.+||
T Consensus 335 ~~l~~~d 341 (723)
T 1xfd_A 335 YHITVSS 341 (723)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 566677
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=6.4e-20 Score=162.30 Aligned_cols=227 Identities=11% Similarity=-0.048 Sum_probs=167.6
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCC-CeEEEeeeCC--CceeeEEEecCCCeEE-Ee--c--CC
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG-YKCVEEYSLP--NAASLVDFDFDESKIV-GL--I--GT 172 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~--~--~~ 172 (422)
.....+..|.+.|.+++| +++ +|++++ ++.|++||+.+ ++.......+ ..+..++|+|+++.++ +. . ..
T Consensus 32 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 32 RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 345577789999999999 567 787776 78999999999 8877766655 3445699999999998 55 2 24
Q ss_pred eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEE-EecCCCeEEEEeCCC-cceeeeeecCCccEEEEEecCC-CEEEE
Q 014590 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 173 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~-~~l~s 249 (422)
.|..++..++......... .....++++++..++ ++..++.+++|++.. +.....+..+...+.+++|+|+ +.++.
T Consensus 111 ~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence 5555565555433222222 244567777888766 788899999998532 2334556667888999999987 66665
Q ss_pred Ec-CCCcEEEEeCC-CCccc-------cceEeEEEecCCCEEEEEeCC-----------CeEEEEECCCCee--eeeecc
Q 014590 250 GS-SLGSIAISGLS-SDQRL-------TGIKTLCYNPCSRLVFAGTTA-----------GYASCWDLRTMKS--LWETRI 307 (422)
Q Consensus 250 ~~-~dg~i~iwd~~-~~~~~-------~~v~~~~~~~~~~~l~~g~~d-----------g~i~iwd~~~~~~--~~~~~~ 307 (422)
++ .++.+.+|++. .+... ..+..++|+|+|++|++++.+ +.|++||+.+++. +..+.+
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 269 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFG 269 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEE
T ss_pred EecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCC
Confidence 54 58999999875 33322 568889999999999988765 5699999998755 444557
Q ss_pred CCCceeeeeeEecCCCEEEEEecCC
Q 014590 308 SPNVVYSLQHLQNDTSTLVVGGIDG 332 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~~~l~s~~~dg 332 (422)
|...+.+++ |+|++++|++++.+.
T Consensus 270 ~~~~~~~~~-~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 270 GQGTMNSPN-WSPDGDEFAYVRYFP 293 (297)
T ss_dssp STTTSCSCC-BCTTSSEEEEEEECC
T ss_pred CCcccccce-ECCCCCEEEEEEecc
Confidence 888899999 999999998887654
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=3.5e-20 Score=185.89 Aligned_cols=232 Identities=12% Similarity=0.071 Sum_probs=171.6
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCC---eEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeec
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~ 188 (422)
.|.+++| +|| +|++++. +.|++||+.++ +..........+..++|+|||+.|+...++.|++||+.+++.....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 3888999 577 8888876 99999999987 4433333334566799999999999666789999999987644222
Q ss_pred CCCc--e---------------eeeEEEeeeCCeEEEecCCC---------------------------------eEEEE
Q 014590 189 REGT--F---------------MKGLCMRYFDPEAVVGCEDG---------------------------------TARVF 218 (422)
Q Consensus 189 ~~~~--~---------------~~~~~~~~~~~~l~~~~~d~---------------------------------~i~iw 218 (422)
..+. . ...+.+++++..|++++.|+ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 2111 1 24578888999888887765 88999
Q ss_pred eCCC-cceeeeee--cCCccEEEEEecCC-CEEEEEcC-----CCcEEEEeCCCCccc------c-----ceEeEEEecC
Q 014590 219 DMYS-RKCSQIIR--MHCAPVTSLSLSED-QLIISGSS-----LGSIAISGLSSDQRL------T-----GIKTLCYNPC 278 (422)
Q Consensus 219 d~~~-~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~-----dg~i~iwd~~~~~~~------~-----~v~~~~~~~~ 278 (422)
|+.+ ++...... .|...+..++| |+ +.+++++. +..|.+||+.+++.. . .+..++|+||
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 9988 77654443 47788999999 98 67776543 568999999988765 1 4568999999
Q ss_pred CCEEEEEeCCCeEEEEECC-CCeeeeeeccCCCceeeeeeEecCCCEEEE-EecCC--eEEEEECCC-CceEEEe
Q 014590 279 SRLVFAGTTAGYASCWDLR-TMKSLWETRISPNVVYSLQHLQNDTSTLVV-GGIDG--VLRVLDQNT-GEVLSRC 348 (422)
Q Consensus 279 ~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s-~~~dg--~v~vwd~~~-~~~~~~~ 348 (422)
|+++++++.+|.+.||.+. ++. ...+..|...+..+..|+|+++.|+. ++.++ .+++|++.. +.....+
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 9999999999977777665 344 67777787788877339999997754 44555 899998863 4444444
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4.1e-19 Score=161.61 Aligned_cols=201 Identities=9% Similarity=0.063 Sum_probs=157.2
Q ss_pred eCCCceeeEEEecCCCeEE-Eec-------CCeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEe
Q 014590 149 SLPNAASLVDFDFDESKIV-GLI-------GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFD 219 (422)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~-~~~-------~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd 219 (422)
........++++|+++.++ ++. ++.|.+||..+++.+.....+.....+++.+++.. +++...++.|.+||
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3344566799999999887 432 67899999998875533333333456788888886 55566689999999
Q ss_pred CCCcceeeeeecCCcc---------EEEEEecCC-CEEEEEc--CCCcEEEEeCCCCccc-------cceEeEEEecCCC
Q 014590 220 MYSRKCSQIIRMHCAP---------VTSLSLSED-QLIISGS--SLGSIAISGLSSDQRL-------TGIKTLCYNPCSR 280 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~---------v~~l~~~~~-~~l~s~~--~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~ 280 (422)
..+++.+..+..+... +.+++++|+ +.+++++ .++.|.+||..+++.. ..+..++|+|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 9999988887654432 688999987 6565554 5789999999988766 3478899999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeeecc----CCCceeeeeeEecCCCEEEEEec-CCeEEEEECCCCceEEEeee
Q 014590 281 LVFAGTTAGYASCWDLRTMKSLWETRI----SPNVVYSLQHLQNDTSTLVVGGI-DGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 281 ~l~~g~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~ 350 (422)
++++++.++.|.+||+.+++.+..+.. +...+.+++ ++|+++++++++. ++.|.+||..+++.+..+..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINIS-LDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE-EETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEE-ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 999999999999999999988877654 455677898 9999997776665 59999999999988877754
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=2.3e-18 Score=156.53 Aligned_cols=250 Identities=13% Similarity=0.119 Sum_probs=167.4
Q ss_pred CCeEEEEEcC--CCeEEE--eeeCCCceeeEEEecCCCeEEEec---CCeEEEEECCCCcee-eec--CCCceeeeEEEe
Q 014590 131 DKVMRLWSLE--GYKCVE--EYSLPNAASLVDFDFDESKIVGLI---GTRICIWRRNGLRSV-FPS--REGTFMKGLCMR 200 (422)
Q Consensus 131 dg~v~iwd~~--~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~~w~~~~~~~~-~~~--~~~~~~~~~~~~ 200 (422)
++.|.+|+++ +++... ..........++|+|||+.++++. ++.|.+|++.++... ... ..+.....++++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 5667777654 565433 333445566799999999433443 589999999776522 111 123334467888
Q ss_pred eeCCeEEEec-CCCeEEEEeCC-Ccc--eeeeeec---------CCccEEEEEecCC-CEEEEEcCCCcEEEEeCC-CCc
Q 014590 201 YFDPEAVVGC-EDGTARVFDMY-SRK--CSQIIRM---------HCAPVTSLSLSED-QLIISGSSLGSIAISGLS-SDQ 265 (422)
Q Consensus 201 ~~~~~l~~~~-~d~~i~iwd~~-~~~--~~~~~~~---------~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~-~~~ 265 (422)
+++..+++++ .++.|.+|++. ++. .+..+.. +...+.+++|+|+ +++++...++.|.+||+. +++
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ 174 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc
Confidence 8888877776 78999999985 332 2333321 1224888999987 666666778899999998 443
Q ss_pred cc----------cceEeEEEecCCCEEEE-EeCCCeEEEEECCC--Cee--eeeeccCC------CceeeeeeEecCCCE
Q 014590 266 RL----------TGIKTLCYNPCSRLVFA-GTTAGYASCWDLRT--MKS--LWETRISP------NVVYSLQHLQNDTST 324 (422)
Q Consensus 266 ~~----------~~v~~~~~~~~~~~l~~-g~~dg~i~iwd~~~--~~~--~~~~~~~~------~~v~~l~~~s~~~~~ 324 (422)
.. ..+..++|+|||+++++ +..++.|.+|++.. ++. +..+.... ..+..++ |+|+|++
T Consensus 175 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~spdG~~ 253 (347)
T 3hfq_A 175 LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR-LSHDGHF 253 (347)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE-ECTTSCE
T ss_pred EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE-ECCCCCE
Confidence 32 36778999999996666 45688999999874 443 22332222 3578898 9999998
Q ss_pred EE-EEecCCeEEEEECCCC---ceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cC
Q 014590 325 LV-VGGIDGVLRVLDQNTG---EVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GM 398 (422)
Q Consensus 325 l~-s~~~dg~v~vwd~~~~---~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~ 398 (422)
|+ +...++.|.+|++... +.+..+.. +...+.+++| |+
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~------------------------------------~~~~~~~~~~spdg 297 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQIST------------------------------------EGDFPRDFDLDPTE 297 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEEEC------------------------------------SSSCCCEEEECTTS
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEEec------------------------------------CCCCcCeEEECCCC
Confidence 74 5556899999998732 22333322 1235678888 67
Q ss_pred EEEEEEeC-CCeEEEEEccC
Q 014590 399 KKVVTTHN-SKYIRLWKFNY 417 (422)
Q Consensus 399 ~~l~s~s~-Dg~i~iW~~~~ 417 (422)
++|++++. ++.|.+|+++.
T Consensus 298 ~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 298 AFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEEcCCCcEEEEEEeC
Confidence 77777765 48999996653
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=5.5e-18 Score=154.01 Aligned_cols=238 Identities=10% Similarity=0.107 Sum_probs=165.0
Q ss_pred EeeccccceeEEEe-cCCeEEEEec---CCeEEEEEcCCCeE--EEeee-CCCceeeEEEecCCCeEE-Ee-cCCeEEEE
Q 014590 107 QWKAHSVGVDQCRM-KRGLILTGVG---DKVMRLWSLEGYKC--VEEYS-LPNAASLVDFDFDESKIV-GL-IGTRICIW 177 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~~l~s~~~---dg~v~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w 177 (422)
....+...+..++| ++|.|++++. ++.|.+|++.+++. +..+. .......++|+|+++.|+ ++ .++.+.+|
T Consensus 34 ~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 34 GLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 34556677888999 5674454443 68999999987763 34432 234566799999999887 55 67999999
Q ss_pred ECCC-Cc--eeee-cCC---------CceeeeEEEeeeCCeEEEecCCCeEEEEeCC-Ccceee--eeecC-CccEEEEE
Q 014590 178 RRNG-LR--SVFP-SRE---------GTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-SRKCSQ--IIRMH-CAPVTSLS 240 (422)
Q Consensus 178 ~~~~-~~--~~~~-~~~---------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~--~~~~~-~~~v~~l~ 240 (422)
++.. +. .+.. ... ......+++.+++..+++...++.|.+||+. +++... .+..+ ...+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 22 1111 111 1123457777787866666778999999998 554332 22222 23678899
Q ss_pred ecCC-C-EEEEEcCCCcEEEEeCCC--Cccc---------------cceEeEEEecCCCEEE-EEeCCCeEEEEECCC--
Q 014590 241 LSED-Q-LIISGSSLGSIAISGLSS--DQRL---------------TGIKTLCYNPCSRLVF-AGTTAGYASCWDLRT-- 298 (422)
Q Consensus 241 ~~~~-~-~l~s~~~dg~i~iwd~~~--~~~~---------------~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~-- 298 (422)
|+|+ + ++++...++.+.+|++.. ++.. ..+..++|+|+|++|+ +...++.|.+|++..
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 9987 5 444567789999999874 4321 2377899999999875 455689999999872
Q ss_pred -CeeeeeeccCCCceeeeeeEecCCCEEEEEec-CCeEEEE--ECCCCceE
Q 014590 299 -MKSLWETRISPNVVYSLQHLQNDTSTLVVGGI-DGVLRVL--DQNTGEVL 345 (422)
Q Consensus 299 -~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~-dg~v~vw--d~~~~~~~ 345 (422)
.+.+..+..+...+..++ |+|+|++|++++. ++.|.+| |..+|+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 274 HLTLIQQISTEGDFPRDFD-LDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEEEEEECSSSCCCEEE-ECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cEEEeEEEecCCCCcCeEE-ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 355556666666788999 9999998888775 4899999 55566654
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=1.1e-18 Score=158.46 Aligned_cols=220 Identities=8% Similarity=0.002 Sum_probs=160.7
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCCceeeecCCCc--eeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecC
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGT--FMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMH 232 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~ 232 (422)
+++++++..++ ++.+++|.+||..+++.+.....+. ....+++.+++.. ++++..++.|.+||+.+++.+..+..+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 35667777777 7889999999999887543222222 3346677777776 456667899999999999887776533
Q ss_pred C------ccEEEEEecCC-CEEEEEcCC------------CcEEEEeCCCCccc---------cceEeEEEecCCCEEEE
Q 014590 233 C------APVTSLSLSED-QLIISGSSL------------GSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 233 ~------~~v~~l~~~~~-~~l~s~~~d------------g~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~ 284 (422)
. ..+..++|+|+ +++++++.+ +.|.+||+.+++.. ..+.+++|+|+|+ +++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 2 23678999987 688887755 89999999875432 4578899999999 666
Q ss_pred EeCCCeEEEEECCCCeeeeeeccCC-------------------------------------------------------
Q 014590 285 GTTAGYASCWDLRTMKSLWETRISP------------------------------------------------------- 309 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------------------------- 309 (422)
++. .|.+||+.+++.+..+..+.
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 544 39999999887766554331
Q ss_pred -------------CceeeeeeEec-CCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccC
Q 014590 310 -------------NVVYSLQHLQN-DTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLS 375 (422)
Q Consensus 310 -------------~~v~~l~~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~ 375 (422)
..+.+++ ++| ++++++++ ++.|.+||+.+++.+..+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~------------------------ 294 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGL-RSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD------------------------ 294 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEE-ECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS------------------------
T ss_pred CCcEEecccccCCCcceeeE-ecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC------------------------
Confidence 1233455 668 88888887 788999999888877766431
Q ss_pred CCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 376 AGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 376 ~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+.+++| ++++|++++.++.|.+||+.+++
T Consensus 295 -------------~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 295 -------------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp -------------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred -------------CCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 23557788 57778888889999999998754
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=2.1e-19 Score=167.90 Aligned_cols=192 Identities=13% Similarity=0.014 Sum_probs=140.8
Q ss_pred eeEEEeeeCCeEEEecCCCeEEEEeCCCc----------ceee-----eeecCCccEEEEEecCC-CEEE----EEcCCC
Q 014590 195 KGLCMRYFDPEAVVGCEDGTARVFDMYSR----------KCSQ-----IIRMHCAPVTSLSLSED-QLII----SGSSLG 254 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----------~~~~-----~~~~~~~~v~~l~~~~~-~~l~----s~~~dg 254 (422)
..+++...+..+++++.++ +++|+.... ..+. ....+...|.+++|+|+ ++++ +|+.|+
T Consensus 40 n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp BCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEE
T ss_pred cEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCc
Confidence 3455555555566666665 666653210 0000 01235678999999987 7888 788999
Q ss_pred cEEEEeCCCC--------cc---c-------cceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeee
Q 014590 255 SIAISGLSSD--------QR---L-------TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSL 315 (422)
Q Consensus 255 ~i~iwd~~~~--------~~---~-------~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 315 (422)
.|++||+.++ +. . ..|.+++|+|+ +.+|++++.||+|++||++++..+....+|...|+++
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v 198 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSV 198 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEE
Confidence 9999998654 11 1 67999999998 8999999999999999999987777777788899999
Q ss_pred eeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEE
Q 014590 316 QHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLA 395 (422)
Q Consensus 316 ~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 395 (422)
+ |+|+|++|++|+.||.|++||.+ ++....+..+.. ....|...|.+++
T Consensus 199 ~-wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~-----------------------------~~~~~~~~v~~v~ 247 (434)
T 2oit_A 199 C-WSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF-----------------------------YESDHPVRVLDVL 247 (434)
T ss_dssp E-ECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT-----------------------------CCTTSCEEEEEEE
T ss_pred E-EcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc-----------------------------cCCCCceeEEEEE
Confidence 9 99999999999999999999998 666666654322 0112445789999
Q ss_pred e--cCEEEEE-EeCCCe------EEEEEccCC
Q 014590 396 V--GMKKVVT-THNSKY------IRLWKFNYS 418 (422)
Q Consensus 396 ~--~~~~l~s-~s~Dg~------i~iW~~~~~ 418 (422)
| ++.++++ ++.||. +++|++...
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9 4555544 445543 899998754
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=6.4e-19 Score=176.10 Aligned_cols=225 Identities=12% Similarity=-0.011 Sum_probs=162.7
Q ss_pred EEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc----eeeEEEecCCCeEE-Eec---------CCeEEEEECCC
Q 014590 117 QCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFDESKIV-GLI---------GTRICIWRRNG 181 (422)
Q Consensus 117 ~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~-~~~---------~~~i~~w~~~~ 181 (422)
++.| ++|.++..+.|++|++||+.+++....+..+.. +..++|||||+.|+ ++. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 5677 577555556799999999999988777765433 67799999999998 544 68999999998
Q ss_pred CceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCccE-----------------EEEEecC
Q 014590 182 LRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPV-----------------TSLSLSE 243 (422)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~l~~~~ 243 (422)
++.+....-.......++++++..|+.+. ++.|++||+.+++..... .++...| .+++|+|
T Consensus 100 g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 100 GEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 87521011112345688999999988875 789999999888765433 2332222 4899999
Q ss_pred C-CEEEEEcCCC----------------------------------cEEEEeCCCCccc---------------cceEeE
Q 014590 244 D-QLIISGSSLG----------------------------------SIAISGLSSDQRL---------------TGIKTL 273 (422)
Q Consensus 244 ~-~~l~s~~~dg----------------------------------~i~iwd~~~~~~~---------------~~v~~~ 273 (422)
| +.|++++.|. .|++||+.+++.. ..+..+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 8 7888877552 7889999887640 467899
Q ss_pred EEecCCCEEEEEeCC----CeEEEEE----CCCCeeeeee----ccCCCcee-----eeeeEecCCCEEEE--EecCC--
Q 014590 274 CYNPCSRLVFAGTTA----GYASCWD----LRTMKSLWET----RISPNVVY-----SLQHLQNDTSTLVV--GGIDG-- 332 (422)
Q Consensus 274 ~~~~~~~~l~~g~~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~l~~~s~~~~~l~s--~~~dg-- 332 (422)
+|+||++++++.... ..|.+|| ..+++....+ ..|...+. .+. |+|||+.|+. +..+|
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~~~g~~ 337 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPV-FSYDAISYYKIFSDKDGYK 337 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCE-ECTTSSCEEEEEECTTSCE
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccE-ECCCCCeEEEEEEccCCce
Confidence 999998877764432 3488899 8887766555 46777676 787 9999996544 44555
Q ss_pred eEEEEECCCCc
Q 014590 333 VLRVLDQNTGE 343 (422)
Q Consensus 333 ~v~vwd~~~~~ 343 (422)
.|.+||+.+++
T Consensus 338 ~l~~~~~~~~~ 348 (719)
T 1z68_A 338 HIHYIKDTVEN 348 (719)
T ss_dssp EEEEESSCSTT
T ss_pred EEEEEECCCCc
Confidence 56777776655
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=6e-17 Score=147.99 Aligned_cols=253 Identities=9% Similarity=0.095 Sum_probs=165.4
Q ss_pred eEEEEe----cCCeEEEEEc--CCCeEE--EeeeCCCceeeEEEecCCCeEE-EecC----CeEEEEECCC--Cce-eee
Q 014590 124 LILTGV----GDKVMRLWSL--EGYKCV--EEYSLPNAASLVDFDFDESKIV-GLIG----TRICIWRRNG--LRS-VFP 187 (422)
Q Consensus 124 ~l~s~~----~dg~v~iwd~--~~~~~~--~~~~~~~~~~~~~~~~~~~~l~-~~~~----~~i~~w~~~~--~~~-~~~ 187 (422)
+++.|+ .++.|.+|++ .+++.. ..+ .......++|+||++.|+ ++.+ +.|.+|+++. +.. ...
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 555664 4678999976 455433 333 334456699999999888 5543 7999998865 332 121
Q ss_pred c-C-CCceeeeEEEeeeCCeEEEec-CCCeEEEEeCCCcceeeee------ec--------CCccEEEEEecCC-CEE-E
Q 014590 188 S-R-EGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYSRKCSQII------RM--------HCAPVTSLSLSED-QLI-I 248 (422)
Q Consensus 188 ~-~-~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~------~~--------~~~~v~~l~~~~~-~~l-~ 248 (422)
. . .+.. ...+..++..+++++ .++.|.+|++.....+..+ .+ +...+.+++|+|+ +++ +
T Consensus 94 ~~~~~~~~--p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 94 TQKTMGAD--PCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EEECSSSC--EEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred EeccCCCC--cEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 1 1 2222 223333666655554 6889999999754322211 11 1223578999987 545 4
Q ss_pred EEcCCCcEEEEeCCCCcc--------------c------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCee--eeee
Q 014590 249 SGSSLGSIAISGLSSDQR--------------L------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKS--LWET 305 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~--------------~------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~--~~~~ 305 (422)
+...++.|.+|++..... . ..+..++|+|+|+++++++ .++.|.+||+.+++. +..+
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 455688999998764331 1 5678999999999888777 689999999987654 2222
Q ss_pred ---ccCCCceeeeeeEecCCCEEEEEec--CCeEEEEECC--CCce--EEEeeecCCcccccCCCCCCeEEeeeccccCC
Q 014590 306 ---RISPNVVYSLQHLQNDTSTLVVGGI--DGVLRVLDQN--TGEV--LSRCVMDIGSASSSSNKVSGVIERNEGRRLSA 376 (422)
Q Consensus 306 ---~~~~~~v~~l~~~s~~~~~l~s~~~--dg~v~vwd~~--~~~~--~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~ 376 (422)
..+......++ |+|+|++|+++.. ++.|.+|++. +++. +..+..
T Consensus 252 ~~~~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-------------------------- 304 (361)
T 3scy_A 252 AADTVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-------------------------- 304 (361)
T ss_dssp ESCSSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--------------------------
T ss_pred ecCCCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--------------------------
Confidence 22334567898 9999998876665 4899999985 4442 222221
Q ss_pred CcccccCCCCCCCCeEEEEe--cCEEEEEEe-CCCeEEEEEccC
Q 014590 377 GCCIDRIPKTIRPPITCLAV--GMKKVVTTH-NSKYIRLWKFNY 417 (422)
Q Consensus 377 ~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s-~Dg~i~iW~~~~ 417 (422)
...+.+++| |+++|++++ .++.|.+|+++.
T Consensus 305 -----------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 305 -----------GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp -----------SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred -----------CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 124667888 688787777 679999987763
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=7.9e-19 Score=164.04 Aligned_cols=145 Identities=12% Similarity=0.137 Sum_probs=113.2
Q ss_pred eEEEeeeCCeEE----EecCCCeEEEEeCCCc--------ce---eeeeecCCccEEEEEecCC--CEEEEEcCCCcEEE
Q 014590 196 GLCMRYFDPEAV----VGCEDGTARVFDMYSR--------KC---SQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAI 258 (422)
Q Consensus 196 ~~~~~~~~~~l~----~~~~d~~i~iwd~~~~--------~~---~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~i 258 (422)
.+++++++..|+ +|+.|+.|++||+.++ +. +..+.+|...|.+++|+|+ +++++++.||+|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 444555555566 7888999999998654 22 3555679999999999985 78999999999999
Q ss_pred EeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC-------CCceeeeeeEecCCCE
Q 014590 259 SGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS-------PNVVYSLQHLQNDTST 324 (422)
Q Consensus 259 wd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~l~~~s~~~~~ 324 (422)
||++++... ..|.+++|+|+|++|++|+.||.|++||++ ++....+..| ...|.++. |++++.+
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~-w~~~~~~ 254 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL-WIGTYVF 254 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE-EEETTEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE-EecCceE
Confidence 999987544 589999999999999999999999999998 5555555433 23789999 8888887
Q ss_pred EEEEe-cCC------eEEEEECCCC
Q 014590 325 LVVGG-IDG------VLRVLDQNTG 342 (422)
Q Consensus 325 l~s~~-~dg------~v~vwd~~~~ 342 (422)
+++.+ .|| .+++|++.+.
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEccCCCccCCCCceEEEEeccC
Confidence 75533 343 3899999754
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=3.8e-18 Score=170.62 Aligned_cols=263 Identities=6% Similarity=-0.027 Sum_probs=179.0
Q ss_pred eeeEEeecccc---ceeEEEe-cCC-eEEEEecC---------CeEEEEEcCCCeEEEeeeCCC----ceeeEEEecCCC
Q 014590 103 IDIDQWKAHSV---GVDQCRM-KRG-LILTGVGD---------KVMRLWSLEGYKCVEEYSLPN----AASLVDFDFDES 164 (422)
Q Consensus 103 ~~~~~l~~H~~---~v~~v~~-~~~-~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~ 164 (422)
.....+.+|.. .|.+++| +|| +|++++.+ +.+.+||+.+++. ..+.... .+..++|+|||+
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC
Confidence 44556677765 4999999 577 88888764 7888999999876 3333221 255689999999
Q ss_pred eEEEecCCeEEEEECCCCceee--ecCCCce-----------------eeeEEEeeeCCeEEEecCCC------------
Q 014590 165 KIVGLIGTRICIWRRNGLRSVF--PSREGTF-----------------MKGLCMRYFDPEAVVGCEDG------------ 213 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~l~~~~~d~------------ 213 (422)
.|+...++.|++||+.+++... ....... .....+++++..|++++.++
T Consensus 127 ~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 127 QLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp CEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC
Confidence 9995556899999998876432 2211111 14578888888888877543
Q ss_pred ----------------------eEEEEeCCCcceeeeeecC------CccEEEEEecCC-CEEEEEc----CCCcEEEEe
Q 014590 214 ----------------------TARVFDMYSRKCSQIIRMH------CAPVTSLSLSED-QLIISGS----SLGSIAISG 260 (422)
Q Consensus 214 ----------------------~i~iwd~~~~~~~~~~~~~------~~~v~~l~~~~~-~~l~s~~----~dg~i~iwd 260 (422)
.|++||+.+++....+..+ ...+..++|+|+ +++++.+ .+..|.+||
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 8999999988865566544 668899999998 5555553 235799999
Q ss_pred CCCCccc--------cce----EeEEEecCCCEEEE--EeCCC------eEEEEE-CCCCe--eeeeeccCCCceee-ee
Q 014590 261 LSSDQRL--------TGI----KTLCYNPCSRLVFA--GTTAG------YASCWD-LRTMK--SLWETRISPNVVYS-LQ 316 (422)
Q Consensus 261 ~~~~~~~--------~~v----~~~~~~~~~~~l~~--g~~dg------~i~iwd-~~~~~--~~~~~~~~~~~v~~-l~ 316 (422)
+.+++.. ..+ ..++|+|||+.|+. +..++ .|.+|| ..+++ ....+..+...+.. ++
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~ 366 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeE
Confidence 9988754 122 37899999997775 44666 577788 34444 14455544444554 57
Q ss_pred eEecCCCEEEEEecC---CeEEEEECCCCc--eEEEeee---cCCcccccCCCCCCeEE
Q 014590 317 HLQNDTSTLVVGGID---GVLRVLDQNTGE--VLSRCVM---DIGSASSSSNKVSGVIE 367 (422)
Q Consensus 317 ~~s~~~~~l~s~~~d---g~v~vwd~~~~~--~~~~~~~---~~~~~~~~~~s~d~~i~ 367 (422)
|+|+|+.|+..+.+ +.+++|++.... ....+.. +...+..+++++||...
T Consensus 367 -~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l 424 (723)
T 1xfd_A 367 -YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFF 424 (723)
T ss_dssp -EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEE
T ss_pred -EcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEE
Confidence 99999998766554 789999986432 2333332 33444556677776543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=1.3e-16 Score=145.80 Aligned_cols=232 Identities=8% Similarity=0.042 Sum_probs=157.8
Q ss_pred cccceeEEEe-cCC-eEEEEecC----CeEEEEEcCC--CeE--EEeeeCC-CceeeEEEecCCCeEE-Ee-cCCeEEEE
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGD----KVMRLWSLEG--YKC--VEEYSLP-NAASLVDFDFDESKIV-GL-IGTRICIW 177 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~d----g~v~iwd~~~--~~~--~~~~~~~-~~~~~~~~~~~~~~l~-~~-~~~~i~~w 177 (422)
|...+..++| ++| +|++++.+ +.|.+|++.. ++. +.....+ .....+++ +++.++ +. .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 6777888999 567 78888875 8999998865 543 3333322 23344565 888777 43 57899999
Q ss_pred ECCCCceee-----ecCCC----------ceeeeEEEeeeCCeEE-EecCCCeEEEEeCCCcce------e-------ee
Q 014590 178 RRNGLRSVF-----PSREG----------TFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKC------S-------QI 228 (422)
Q Consensus 178 ~~~~~~~~~-----~~~~~----------~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~------~-------~~ 228 (422)
++.....+. ..+.+ .....+++.+++..++ ++..++.|.+|++..... + ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 997543211 11111 1124577788888654 455689999998764431 1 11
Q ss_pred eecCCccEEEEEecCC-CEEEEEc-CCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeCC--CeEE
Q 014590 229 IRMHCAPVTSLSLSED-QLIISGS-SLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTTA--GYAS 292 (422)
Q Consensus 229 ~~~~~~~v~~l~~~~~-~~l~s~~-~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~d--g~i~ 292 (422)
...+......++|+|+ +++++++ .++.|.+||+.+++.. ..+..++|+|||++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 2233456789999988 5666555 6899999999876542 335699999999999777654 8999
Q ss_pred EEECC--CCe--eeeeeccCCCceeeeeeEecCCCEEEEEe-cCCeEEEEEC--CCCceEE
Q 014590 293 CWDLR--TMK--SLWETRISPNVVYSLQHLQNDTSTLVVGG-IDGVLRVLDQ--NTGEVLS 346 (422)
Q Consensus 293 iwd~~--~~~--~~~~~~~~~~~v~~l~~~s~~~~~l~s~~-~dg~v~vwd~--~~~~~~~ 346 (422)
+|++. +++ .+..+.. ...+.+++ |+|+|++|++++ .++.|.+|++ .+++...
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFI-ITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEE-ECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEE-ECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 99986 344 4444444 45678898 999999888887 6789999654 5665543
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=5.1e-17 Score=149.87 Aligned_cols=290 Identities=10% Similarity=-0.016 Sum_probs=186.2
Q ss_pred cceeeEEeeccccceeE-----EEe-cCC-eEEEEec-CC--eEEEEEcCCCeEEEeeeCCCcee-eEEEecCCCeEE-E
Q 014590 101 GRIDIDQWKAHSVGVDQ-----CRM-KRG-LILTGVG-DK--VMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-G 168 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~-----v~~-~~~-~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~ 168 (422)
.+..+..|..|...... .+| +|| +|+.++. +| .|.+||+.+++.......+.... ...|+||++.|+ +
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 34567788888876665 778 677 7887776 66 48888999998887776665444 478999999998 7
Q ss_pred ecCCeEEEEECCCCcee--eecCCCceeeeEE--EeeeCCeEEE----------------------ecCCCeEEEEeCCC
Q 014590 169 LIGTRICIWRRNGLRSV--FPSREGTFMKGLC--MRYFDPEAVV----------------------GCEDGTARVFDMYS 222 (422)
Q Consensus 169 ~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~l~~----------------------~~~d~~i~iwd~~~ 222 (422)
..++.+++||+.+++.. ...+.+ ...... +.+++..++. ...+..|.+||+.+
T Consensus 99 ~~~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEENVVYQVPAE-WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred eCCCeEEEEECCCCcceeeeechhh-cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 77889999999988743 332222 221122 2334444442 23457899999998
Q ss_pred cceeeeeecCCccEEEEEecC-C-CEEEEEcCC------CcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEe
Q 014590 223 RKCSQIIRMHCAPVTSLSLSE-D-QLIISGSSL------GSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d------g~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~ 286 (422)
++.... ..+...+..+.|+| + +.++..+.+ ..|.++|...+... ..+...+|+|||+.|+..+
T Consensus 178 g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 178 GESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp CCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 875444 34667789999999 7 666665543 37888888665433 1477889999999776544
Q ss_pred C-CC----eEEEEECCCCeee--eeeccCCCc---eeeeeeEecCCCEEEEE---------ecCCeEEEEECCCCceEEE
Q 014590 287 T-AG----YASCWDLRTMKSL--WETRISPNV---VYSLQHLQNDTSTLVVG---------GIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 287 ~-dg----~i~iwd~~~~~~~--~~~~~~~~~---v~~l~~~s~~~~~l~s~---------~~dg~v~vwd~~~~~~~~~ 347 (422)
. ++ .|++||+.+++.. ..+.++... ...+. |+|||+.|+.. ..+..|++||+.+++. ..
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~ 334 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSL-MVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HR 334 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSE-EEEEECCC------------CCCCEEEEEETTTTEE-EE
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCe-EccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EE
Confidence 3 22 3999999988643 333321100 12235 89999987754 4567899999987764 34
Q ss_pred eeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEe-CCCeEEEEEccCCC
Q 014590 348 CVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTH-NSKYIRLWKFNYSD 419 (422)
Q Consensus 348 ~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s-~Dg~i~iW~~~~~~ 419 (422)
+..+.... ..+.......+.+++| ||+.|+.++ .+|...||.++.++
T Consensus 335 l~~~~~~~-------------------------~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 335 VARHDTSW-------------------------KVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp EEECCCCC-------------------------CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred eccccCcc-------------------------cccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 43332200 0000011113555667 676666544 68888888876554
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=8.7e-17 Score=146.64 Aligned_cols=244 Identities=16% Similarity=0.114 Sum_probs=171.5
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEe----------cCCeEEEEEcCCCeEEEeeeCC-------CceeeEEEecC
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP-------NAASLVDFDFD 162 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~ 162 (422)
+..+.++..+..+ .++| +|| +++++. .++.|.+||..+++.+.++..+ .....++++||
T Consensus 41 ~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spd 118 (361)
T 2oiz_A 41 GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTD 118 (361)
T ss_dssp CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTT
T ss_pred CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCC
Confidence 3455677777666 7888 577 777765 3678999999999998888643 23456999999
Q ss_pred CCeEE-Ee-c-CCeEEEEECCCCceeee-cCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCC-cceee------eee
Q 014590 163 ESKIV-GL-I-GTRICIWRRNGLRSVFP-SREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYS-RKCSQ------IIR 230 (422)
Q Consensus 163 ~~~l~-~~-~-~~~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~-~~~~~------~~~ 230 (422)
|++|+ +. . +++|.+||+.+.+.+.. ...+.. ....+.+.+ ..+++.+.||.+.+|+... ++... .+.
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred CCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 99998 43 2 68999999999876543 222221 112233333 3478888999999998865 55441 122
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC---
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT--- 287 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~--- 287 (422)
....++ .+.+.++ ..++..+.++.+.++|+...... .....++++|+++.++++..
T Consensus 198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 222222 1222333 45666678899999998654321 11223789999988887653
Q ss_pred --------CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC--ceEEEeeecCC
Q 014590 288 --------AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG--EVLSRCVMDIG 353 (422)
Q Consensus 288 --------dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~--~~~~~~~~~~~ 353 (422)
++.|.+||+.+++.+.++..+. +.+++ |+|+|++|++++. +.|.+||..++ +.+.++.....
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia-~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~ 348 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMT-IDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAE 348 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEE-EETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCS
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEE-ECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCC
Confidence 3589999999999999998876 89999 9999999998887 99999999999 88888744333
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=1.5e-17 Score=162.09 Aligned_cols=252 Identities=10% Similarity=-0.064 Sum_probs=167.2
Q ss_pred ceeeEEEecCCCeEE-Eec-CCeEEEEECCCCceee-ecCCCceeeeEEEeeeCCeEEEecC---CCeEEEEeCCC---c
Q 014590 153 AASLVDFDFDESKIV-GLI-GTRICIWRRNGLRSVF-PSREGTFMKGLCMRYFDPEAVVGCE---DGTARVFDMYS---R 223 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~-~~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~---d~~i~iwd~~~---~ 223 (422)
.+..++|+|||+.|+ ++. ++++.+|+++++.... ..+....+....++++ ..+++++. +...++|.+.. +
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 466799999999998 555 9999999997765432 2222223334445544 34555554 45455654432 2
Q ss_pred ceeeeeecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCccc----cceEeEEEecCCCEEEEEeCC----CeEEE
Q 014590 224 KCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRL----TGIKTLCYNPCSRLVFAGTTA----GYASC 293 (422)
Q Consensus 224 ~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~----~~v~~~~~~~~~~~l~~g~~d----g~i~i 293 (422)
... .+..+. .+...+|+|+ ..+++.+.++.+.+||+.+++.. ....+++|+|||+++++++.+ +.|++
T Consensus 102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 222 332222 2334566654 44555555556669999888754 223789999999999988876 78999
Q ss_pred EECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCC--eEEEEECCCCceEEEeeecCCcccccC--------CCCC
Q 014590 294 WDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG--VLRVLDQNTGEVLSRCVMDIGSASSSS--------NKVS 363 (422)
Q Consensus 294 wd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~--------~s~d 363 (422)
||+.+++.. .+..|.+.+..++ |+|||+.|+++..++ .|++||+.+++.. .+..+...+..++ +++|
T Consensus 180 ~d~~~g~~~-~l~~~~~~~~~~~-~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spd 256 (582)
T 3o4h_A 180 SNLSSGGLR-VFDSGEGSFSSAS-ISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPD 256 (582)
T ss_dssp EETTTCCCE-EECCSSCEEEEEE-ECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTT
T ss_pred EcCCCCCce-EeecCCCccccce-ECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCC
Confidence 999987754 6778888899999 999999999888888 8999999988877 6666655555555 7777
Q ss_pred CeEEeee-------ccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCe---EEEEEcc
Q 014590 364 GVIERNE-------GRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKY---IRLWKFN 416 (422)
Q Consensus 364 ~~i~~~~-------~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~---i~iW~~~ 416 (422)
|.+.... .+.+ +.... .+.+.|.+++| +++++++++.+.+ |.+|+..
T Consensus 257 g~~~~~~~~~g~~~l~~~--g~~~~----~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 257 GRLAVVARREGRSAVFID--GERVE----APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp SCEEEEEEETTEEEEEET--TEEEC----CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred CcEEEEEEcCCcEEEEEE--CCeec----cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCC
Confidence 7553211 1122 11111 23356778887 7889999888754 5555544
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=7.7e-16 Score=140.84 Aligned_cols=220 Identities=10% Similarity=0.069 Sum_probs=144.9
Q ss_pred eEEEEecC--CeEEEEEc--CCCeEE--Eeee--CCCceeeEEEecCCCeEE-EecCCeEEEEECC-CCceee-ecC--C
Q 014590 124 LILTGVGD--KVMRLWSL--EGYKCV--EEYS--LPNAASLVDFDFDESKIV-GLIGTRICIWRRN-GLRSVF-PSR--E 190 (422)
Q Consensus 124 ~l~s~~~d--g~v~iwd~--~~~~~~--~~~~--~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~-~~~~~~-~~~--~ 190 (422)
+++.|+.. +.|.+|++ .+++.. .... .......++++|+++.++ ++.+ .|.+|++. +++... ... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35555543 56877664 566543 2222 223456799999999887 5555 99999986 555321 111 1
Q ss_pred CceeeeEEEeeeCCe--EEEec-------------CCCeEEEEeCC-Ccceeeeee----cCCccEEEEEecCC-CEEEE
Q 014590 191 GTFMKGLCMRYFDPE--AVVGC-------------EDGTARVFDMY-SRKCSQIIR----MHCAPVTSLSLSED-QLIIS 249 (422)
Q Consensus 191 ~~~~~~~~~~~~~~~--l~~~~-------------~d~~i~iwd~~-~~~~~~~~~----~~~~~v~~l~~~~~-~~l~s 249 (422)
+. ...+++.+++.. ++++. .++.+.+|++. +++....+. .+...+.+++|+|+ +++++
T Consensus 83 g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CC-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 22 223555666664 44553 68999999997 466544443 24567899999997 66666
Q ss_pred Ec-CCCcEEEEeCC-CCccc-----------cceEeEEEecCCCEEEEEeC-CCeEEEEECC--CCeee------eeec-
Q 014590 250 GS-SLGSIAISGLS-SDQRL-----------TGIKTLCYNPCSRLVFAGTT-AGYASCWDLR--TMKSL------WETR- 306 (422)
Q Consensus 250 ~~-~dg~i~iwd~~-~~~~~-----------~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~--~~~~~------~~~~- 306 (422)
+. .++.|.+||+. +++.. ..+..++|+|+|+++++++. ++.|.+|++. +++.. ..+.
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 54 46899999998 66532 24788999999999988775 6899999765 45432 1221
Q ss_pred ---cCCC------ceeeeeeEecCCCEEEEEecC-C-----eEEEEECC-CCceE
Q 014590 307 ---ISPN------VVYSLQHLQNDTSTLVVGGID-G-----VLRVLDQN-TGEVL 345 (422)
Q Consensus 307 ---~~~~------~v~~l~~~s~~~~~l~s~~~d-g-----~v~vwd~~-~~~~~ 345 (422)
+|.. .+..+++|+|||++|++++.+ + .|.+|++. +++..
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 1222 467776589999988877643 2 89999996 56644
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=6e-17 Score=161.83 Aligned_cols=236 Identities=8% Similarity=-0.007 Sum_probs=163.5
Q ss_pred ceeeEEeecccc---ceeEEEe-cCC-eEEEEec---------CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE
Q 014590 102 RIDIDQWKAHSV---GVDQCRM-KRG-LILTGVG---------DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV 167 (422)
Q Consensus 102 ~~~~~~l~~H~~---~v~~v~~-~~~-~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 167 (422)
+.....+.+|.. .|.+++| +|| +|++++. |+.|++||+.+++.+........+..++|+|||+.|+
T Consensus 46 g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la 125 (719)
T 1z68_A 46 GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLA 125 (719)
T ss_dssp CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEE
T ss_pred CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEE
Confidence 334445555554 3899999 577 8888776 7899999999988742222234566799999999999
Q ss_pred EecCCeEEEEECCCCceeeecCCCce-------------------eeeEEEeeeCCeEEEecCCC---------------
Q 014590 168 GLIGTRICIWRRNGLRSVFPSREGTF-------------------MKGLCMRYFDPEAVVGCEDG--------------- 213 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~~~~~d~--------------- 213 (422)
...++.|++|++.++........++. ....++++++..|++++.|.
T Consensus 126 ~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 126 YVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp EEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSS
T ss_pred EEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 66789999999988764322211111 13678889999988887652
Q ss_pred -------------------eEEEEeCCCccee--------eeeecCCccEEEEEecCCC-EEEEEcCC----CcEEEEe-
Q 014590 214 -------------------TARVFDMYSRKCS--------QIIRMHCAPVTSLSLSEDQ-LIISGSSL----GSIAISG- 260 (422)
Q Consensus 214 -------------------~i~iwd~~~~~~~--------~~~~~~~~~v~~l~~~~~~-~l~s~~~d----g~i~iwd- 260 (422)
.|++||+.+++.. ..+.+|...+..++|+|++ ++++.... ..|.+||
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~ 285 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDF 285 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEE
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcc
Confidence 7899999888753 1234578889999999985 44443322 2488999
Q ss_pred ---CCCCccc-----------cceE-----eEEEecCCCEEEE--EeCCC--eEEEEECCCCeeeeeeccCCCceeeeee
Q 014590 261 ---LSSDQRL-----------TGIK-----TLCYNPCSRLVFA--GTTAG--YASCWDLRTMKSLWETRISPNVVYSLQH 317 (422)
Q Consensus 261 ---~~~~~~~-----------~~v~-----~~~~~~~~~~l~~--g~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 317 (422)
+.+++.. ..+. .++|+|||+.++. +..+| .|.+||+.+++ ...+..+...+..+.
T Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~- 363 (719)
T 1z68_A 286 REDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIF- 363 (719)
T ss_dssp CSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEE-
T ss_pred cCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEE-
Confidence 7766543 1244 7899999996554 44555 57778887665 445656666678887
Q ss_pred EecCCCEEEEEecC-----CeEEEEECC
Q 014590 318 LQNDTSTLVVGGID-----GVLRVLDQN 340 (422)
Q Consensus 318 ~s~~~~~l~s~~~d-----g~v~vwd~~ 340 (422)
++ +++.|+..+.+ +..++|.+.
T Consensus 364 ~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 364 RV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 55 77776666554 788888765
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=2.9e-16 Score=157.19 Aligned_cols=228 Identities=8% Similarity=-0.032 Sum_probs=159.9
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCc----eee--EEEecCCCeEE-EecC---------CeEE
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASL--VDFDFDESKIV-GLIG---------TRIC 175 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~--~~~~~~~~~l~-~~~~---------~~i~ 175 (422)
...++.| +|| +++++ |++|++||+.++++...+..+.. ... ++|||||+.|+ ++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 4567889 577 77775 99999999999998877776542 122 78999999998 5543 6778
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee-ecCCccE-----------------E
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPV-----------------T 237 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v-----------------~ 237 (422)
+||+.+++...............+++++..|+.+. ++.|++||..+++..+.. .++...+ .
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 99999987542222223345778889999888874 689999999887754422 2332222 3
Q ss_pred EEEecCC-CEEEEEcCCC------------------------------------cEEEEeCCC---Cc---cc-------
Q 014590 238 SLSLSED-QLIISGSSLG------------------------------------SIAISGLSS---DQ---RL------- 267 (422)
Q Consensus 238 ~l~~~~~-~~l~s~~~dg------------------------------------~i~iwd~~~---~~---~~------- 267 (422)
.+.|+|| +.|+.++.|. +|++||+.+ ++ ..
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 4889998 6777764321 588899988 72 22
Q ss_pred -----cceEeEEEecCCCEEEEEeC----CCeEEEEECCCCe----ee--eee--ccCCCcee-----eeeeEecCCCEE
Q 014590 268 -----TGIKTLCYNPCSRLVFAGTT----AGYASCWDLRTMK----SL--WET--RISPNVVY-----SLQHLQNDTSTL 325 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g~~----dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~l~~~s~~~~~l 325 (422)
..+..++|+|||+.++.... +..|.+||+.+++ +. .++ ..|...|. ... |+|||+.|
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~-fspDG~~l 333 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH-FTLDGNSF 333 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE-ECTTSSEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce-EcCCCCEE
Confidence 34788999999997666543 3479999999887 22 222 44655554 677 99999987
Q ss_pred E-EEec-C--CeEEEEECCCCceE
Q 014590 326 V-VGGI-D--GVLRVLDQNTGEVL 345 (422)
Q Consensus 326 ~-s~~~-d--g~v~vwd~~~~~~~ 345 (422)
+ ..+. + ..|++||+.+++..
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCE
T ss_pred EEEEEcCCCceEEEEEECCCCceE
Confidence 7 6653 3 46888898866544
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=3.8e-16 Score=142.88 Aligned_cols=230 Identities=9% Similarity=0.034 Sum_probs=161.3
Q ss_pred cccceeEEEe-cCC-eEEEEecCCeEEEEEcC-CCeEEEeee--CCCceeeEEEecCCCe--EEEe--------------
Q 014590 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE-GYKCVEEYS--LPNAASLVDFDFDESK--IVGL-------------- 169 (422)
Q Consensus 111 H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~-~~~~~~~~~--~~~~~~~~~~~~~~~~--l~~~-------------- 169 (422)
+...+..+++ ++| +|++++.+ .|.+|++. +++...... .+.....++++|||+. ++..
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 4456888999 577 78888887 99999997 787654433 2223445889999995 3332
Q ss_pred cCCeEEEEECCC-Ccee--eec---CCCceeeeEEEeeeCCeEEEec-CCCeEEEEeCC-Cccee--eeee--cCCccEE
Q 014590 170 IGTRICIWRRNG-LRSV--FPS---REGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMY-SRKCS--QIIR--MHCAPVT 237 (422)
Q Consensus 170 ~~~~i~~w~~~~-~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~-~~~~~--~~~~--~~~~~v~ 237 (422)
.++.+.+|++.. ++.. ... ..+.....++++++++.++++. .++.|++||+. +++.. ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 588999999974 4321 221 1233445677888888777654 46899999998 67643 3333 2356789
Q ss_pred EEEecCC-CEEEEEc-CCCcEEEEeCC--CCcc------c-----c------------ceEeEE-EecCCCEEEEEeCCC
Q 014590 238 SLSLSED-QLIISGS-SLGSIAISGLS--SDQR------L-----T------------GIKTLC-YNPCSRLVFAGTTAG 289 (422)
Q Consensus 238 ~l~~~~~-~~l~s~~-~dg~i~iwd~~--~~~~------~-----~------------~v~~~~-~~~~~~~l~~g~~dg 289 (422)
.++|+|+ +++++++ .++.|.+|++. +++. + . .+..++ |+|||++|+++..+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999987 6776665 47899998764 4432 1 1 478899 999999988776432
Q ss_pred ------eEEEEECC-CCeeee---eeccCCCceeeeeeEec---CCCEEEEEecC-CeEEEEECCCC
Q 014590 290 ------YASCWDLR-TMKSLW---ETRISPNVVYSLQHLQN---DTSTLVVGGID-GVLRVLDQNTG 342 (422)
Q Consensus 290 ------~i~iwd~~-~~~~~~---~~~~~~~~v~~l~~~s~---~~~~l~s~~~d-g~v~vwd~~~~ 342 (422)
.|.+|++. +++... ....+...+..++ |+| +|++|++++.+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a-~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA-VSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC-EEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccce-ecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999986 565443 1333445567888 999 89999998864 89999998755
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=4.5e-15 Score=133.65 Aligned_cols=177 Identities=12% Similarity=0.088 Sum_probs=124.3
Q ss_pred EEEecCCCeEEEEeCCCcc-eeeee---------ecCCccEEEEEecC-C-CEEEEEc-CCCcEEEEeCCCCccc-----
Q 014590 206 AVVGCEDGTARVFDMYSRK-CSQII---------RMHCAPVTSLSLSE-D-QLIISGS-SLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~-~~~~~---------~~~~~~v~~l~~~~-~-~~l~s~~-~dg~i~iwd~~~~~~~----- 267 (422)
+++...++.|++||..... .+..+ ..+......++++| + .++++.+ .++.|++|| .++..+
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~ 183 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGE 183 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEecc
Confidence 4444445555666553221 23332 23344678999998 5 5666665 689999999 455544
Q ss_pred ------------cceEeEEEecC-CCEEEEEeCCCeEEEEECCCCeeeeeec--cCCCceeeeeeEecCCCEEEE-----
Q 014590 268 ------------TGIKTLCYNPC-SRLVFAGTTAGYASCWDLRTMKSLWETR--ISPNVVYSLQHLQNDTSTLVV----- 327 (422)
Q Consensus 268 ------------~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~s~~~~~l~s----- 327 (422)
..+..++++|+ +.++++...++.|++||..+++.+..+. .+...+.+++ ++| +..+++
T Consensus 184 ~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~p-g~~~~~~g~~~ 261 (329)
T 3fvz_A 184 ESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS-YIP-GFLFAVNGKPY 261 (329)
T ss_dssp ECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE-EET-TEEEEEECCCC
T ss_pred CCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee-ecC-CEEEEeCCCEE
Confidence 12889999998 7777777788999999999888887774 3456788888 888 433333
Q ss_pred --EecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEE
Q 014590 328 --GGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVT 403 (422)
Q Consensus 328 --~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s 403 (422)
...+..|++||..+++.+..+... .++...+.+|++ +|..+++
T Consensus 262 v~~~~~~~v~~~~~~~g~~~~~~~~~---------------------------------~~~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEIIDVFKPV---------------------------------RKHFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEEEEECCS---------------------------------SSCCSSEEEEEECTTSEEEEE
T ss_pred eccCCCcEEEEEEcCCCeEEEEEcCC---------------------------------CCccCCeeEEEECCCCCEEEE
Confidence 334558999999999988877421 123456788899 5789999
Q ss_pred EeCCCeEEEEEccCC
Q 014590 404 THNSKYIRLWKFNYS 418 (422)
Q Consensus 404 ~s~Dg~i~iW~~~~~ 418 (422)
...+++|++|+++..
T Consensus 309 d~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 309 DAHTNTVWKFTLTEK 323 (329)
T ss_dssp ESSSCCEEEEEEEEC
T ss_pred ECCCCEEEEEeCCcc
Confidence 999999999998653
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=1.4e-15 Score=150.49 Aligned_cols=240 Identities=13% Similarity=-0.021 Sum_probs=165.2
Q ss_pred EEeeccccceeEEEecCC--eEEEE--ecCCeEEEEEcCCCeEEEeeeCCC-cee---------eEEEe--cCCCe-EEE
Q 014590 106 DQWKAHSVGVDQCRMKRG--LILTG--VGDKVMRLWSLEGYKCVEEYSLPN-AAS---------LVDFD--FDESK-IVG 168 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~~~--~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~-~~~---------~~~~~--~~~~~-l~~ 168 (422)
..+.+|...+..++++++ ++++. +.++...||....+.....+..+. .+. ...++ |||+. |+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 346789999999999755 55666 558899999964444444444332 222 44455 99999 774
Q ss_pred ec--CCeEEEEECC--C-Cce-eeecC----CCceeeeEEEeeeCCeEEEecCC----------CeEEEEeCCC------
Q 014590 169 LI--GTRICIWRRN--G-LRS-VFPSR----EGTFMKGLCMRYFDPEAVVGCED----------GTARVFDMYS------ 222 (422)
Q Consensus 169 ~~--~~~i~~w~~~--~-~~~-~~~~~----~~~~~~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~------ 222 (422)
+. +..|.++++. + +.. .+... ........+++++++.|++++.+ ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 33 4667777776 3 332 22221 23345567888889988888876 5899999987
Q ss_pred cceeeeee-cCCccEEEEEecCC-CEEEEEcCC--------CcEEEEeCC-CC---ccc-------cceEeEEEecCCCE
Q 014590 223 RKCSQIIR-MHCAPVTSLSLSED-QLIISGSSL--------GSIAISGLS-SD---QRL-------TGIKTLCYNPCSRL 281 (422)
Q Consensus 223 ~~~~~~~~-~~~~~v~~l~~~~~-~~l~s~~~d--------g~i~iwd~~-~~---~~~-------~~v~~~~~~~~~~~ 281 (422)
++.. .+. .+...+..++|+|| +.|+.++.+ ..|.+||+. ++ +.. ..+..++|+|||++
T Consensus 177 ~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 177 SAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred Ccee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 5543 444 55677888999998 778777644 379999998 56 322 56888999999998
Q ss_pred EEEEeCCC--eEEEEECCCCeeeeeeccCCCc--------eeeeeeEecCCCEEEEEecCCeEEEE--ECCCCceEEEee
Q 014590 282 VFAGTTAG--YASCWDLRTMKSLWETRISPNV--------VYSLQHLQNDTSTLVVGGIDGVLRVL--DQNTGEVLSRCV 349 (422)
Q Consensus 282 l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~l~~~s~~~~~l~s~~~dg~v~vw--d~~~~~~~~~~~ 349 (422)
++++..++ .|.+||+.+++.......+... +..++ ++|+++++++++. +.++|| |+.+++ +..+.
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFA-PLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEE-ECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEe-EeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 88888888 6777787666654433333222 45677 8899999999998 999999 555444 45553
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=8.4e-16 Score=141.94 Aligned_cols=237 Identities=12% Similarity=-0.026 Sum_probs=156.7
Q ss_pred eeeEEeeccccc-----eeEEEe-cCC-eEEEEecC---CeEEEEEcCCCeEEEeeeCCCceee-EEEecCCCeEE-Eec
Q 014590 103 IDIDQWKAHSVG-----VDQCRM-KRG-LILTGVGD---KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLI 170 (422)
Q Consensus 103 ~~~~~l~~H~~~-----v~~v~~-~~~-~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~ 170 (422)
..+..|..+... +..++| +|| +|+....+ ..|.+||+.+++.......+..... ..|+|||+.|+ ++.
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 100 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN 100 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc
Confidence 445666655444 777888 577 66665432 4788899998887665544443333 78999999997 788
Q ss_pred CCeEEEEECCCCcee--eecCCCceeee------------------EEEeeeCCeEEEe-----cCCCeEEEEeCCCcce
Q 014590 171 GTRICIWRRNGLRSV--FPSREGTFMKG------------------LCMRYFDPEAVVG-----CEDGTARVFDMYSRKC 225 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~--~~~~~~~~~~~------------------~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~ 225 (422)
++.|.+|++.+++.. .....+..... ..+.+++..++.+ ..+..|.+||+.+++.
T Consensus 101 ~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL 180 (396)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE
T ss_pred CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE
Confidence 889999999887632 22222211110 1122233333322 3567899999988876
Q ss_pred eeeeecCCccEEEEEecC-C-CEEEEEcCC------CcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCC-
Q 014590 226 SQIIRMHCAPVTSLSLSE-D-QLIISGSSL------GSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTA- 288 (422)
Q Consensus 226 ~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d------g~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~d- 288 (422)
.... .+...+..+.|+| + +.++..+.+ ..|.+||+..++.. ..+..++|+|+|++|+.++.+
T Consensus 181 ~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 181 EVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp EEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred Eeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 5544 4667789999999 5 555555443 46889998765432 247778999999988777543
Q ss_pred ----CeEEEEECCCCeeeeeeccCCCceeeeeeEec-CCCEEEEEe----------------cCCeEEEEECCCCce
Q 014590 289 ----GYASCWDLRTMKSLWETRISPNVVYSLQHLQN-DTSTLVVGG----------------IDGVLRVLDQNTGEV 344 (422)
Q Consensus 289 ----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~-~~~~l~s~~----------------~dg~v~vwd~~~~~~ 344 (422)
+.|++||+.+++...... ... .. +. |+| +|+++++++ .++.|++||+.+++.
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~-~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 260 GQTDRVIYKANPETLENEEVMV-MPP-CS-HL-MSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp TTCCEEEEEECTTTCCEEEEEE-CCS-EE-EE-EECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCccceEEEEECCCCCeEEeee-CCC-CC-CC-ccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 459999998876543222 222 22 66 889 999888754 347899999987764
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=9.3e-15 Score=128.80 Aligned_cols=229 Identities=11% Similarity=0.083 Sum_probs=162.1
Q ss_pred eccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCC-------CceeeEEEe-cCCCeEEEec--CCeEEE
Q 014590 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-------NAASLVDFD-FDESKIVGLI--GTRICI 176 (422)
Q Consensus 109 ~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~l~~~~--~~~i~~ 176 (422)
.+|...+.++++ +++ ++++...++.|.+||.. ++.+..+... .....+++. +++..+++.. ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 356678899999 466 67777788999999987 6666666431 234558884 5666666553 799999
Q ss_pred EECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee--cCCccEEEEEecCC-CEEEEEcC
Q 014590 177 WRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 177 w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
|+.++.... +..........+++.+.+..+++...++.|.+||. +++.+..+. .+...+..++++++ +++++...
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred ECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 995443321 22222223345666666666777777899999996 466665554 34456899999987 56666677
Q ss_pred CCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCC-eEEEEECCCCeeeeeeccCC--CceeeeeeEecC
Q 014590 253 LGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAG-YASCWDLRTMKSLWETRISP--NVVYSLQHLQND 321 (422)
Q Consensus 253 dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~~~--~~v~~l~~~s~~ 321 (422)
++.|++||....... ..+..++++|+|+++++...++ .|.+||.. ++.+..+..+. ..+.+++ ++|+
T Consensus 184 ~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~-~~~~ 261 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVA-LMDD 261 (286)
T ss_dssp GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEE-EETT
T ss_pred CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEE-ECCC
Confidence 899999997433211 4688999999999888888776 99999954 66666665543 3467898 9999
Q ss_pred CCEEEEEecCCeEEEEECCCC
Q 014590 322 TSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~ 342 (422)
|+++++ +.|+.|++|+....
T Consensus 262 g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 262 GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TEEEEE-ETTTEEEEEECSCC
T ss_pred CcEEEE-CCCCeEEEEEcccc
Confidence 987776 57999999998654
No 170
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=1.2e-13 Score=132.28 Aligned_cols=294 Identities=9% Similarity=0.022 Sum_probs=201.4
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECC--CCceeeecCCCceeeeEEEe
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRN--GLRSVFPSREGTFMKGLCMR 200 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~--~~~~~~~~~~~~~~~~~~~~ 200 (422)
++++...++.|.++|..+++.+.++........+.|+|||++++ ++.++.|.+||+. +.+.+.....+.....+.++
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 248 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEc
Confidence 77778889999999999999999998877777899999999987 8889999999996 66555444445555577777
Q ss_pred ----eeCCeEEEe-cCCCeEEEEeCCCcceeeeeecC----------Cc-cEEEEEecCC--CEEEEEcCCCcEEEEeCC
Q 014590 201 ----YFDPEAVVG-CEDGTARVFDMYSRKCSQIIRMH----------CA-PVTSLSLSED--QLIISGSSLGSIAISGLS 262 (422)
Q Consensus 201 ----~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~----------~~-~v~~l~~~~~--~~l~s~~~dg~i~iwd~~ 262 (422)
++++.++++ ..+++|.++|..+.+.++.+... .. .+..+..+++ .++++...+|.|.++|..
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 477775555 45699999999999988776421 12 5777888765 466666778999999987
Q ss_pred CCccc--------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeecc-----CCCceeeeeeEecCCCEE-EE
Q 014590 263 SDQRL--------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRI-----SPNVVYSLQHLQNDTSTL-VV 327 (422)
Q Consensus 263 ~~~~~--------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~s~~~~~l-~s 327 (422)
+...+ .....+.|+|+|++++++. .++.|.++|+.+++.+..+.. |.+ ....|++|++..+ ++
T Consensus 329 ~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t 406 (567)
T 1qks_A 329 DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPTFGPVWAT 406 (567)
T ss_dssp CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETTTEEEEEE
T ss_pred CCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCCCCcEEEe
Confidence 65432 4566789999999987766 578899999999988766544 322 2333467875544 44
Q ss_pred Ee-cCCeEEEEECCC-------CceEEEeeecCCcccccCCCCCC-----------------eEEeeeccccCC---Ccc
Q 014590 328 GG-IDGVLRVLDQNT-------GEVLSRCVMDIGSASSSSNKVSG-----------------VIERNEGRRLSA---GCC 379 (422)
Q Consensus 328 ~~-~dg~v~vwd~~~-------~~~~~~~~~~~~~~~~~~~s~d~-----------------~i~~~~~~~~~~---~~~ 379 (422)
+. .++.|.++|..+ .+.++++.........+..++|+ .|.+.+...... ...
T Consensus 407 ~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~ 486 (567)
T 1qks_A 407 SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPE 486 (567)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCC
T ss_pred CCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCC
Confidence 43 468999999987 66788877643332223333443 333333332200 000
Q ss_pred cccCC-------CCCCCCeEEEEe--cCEE-EEEEe----CCCeEEEEEccCCC
Q 014590 380 IDRIP-------KTIRPPITCLAV--GMKK-VVTTH----NSKYIRLWKFNYSD 419 (422)
Q Consensus 380 ~~~~~-------~~h~~~v~~i~~--~~~~-l~s~s----~Dg~i~iW~~~~~~ 419 (422)
+..++ ..-...+..+.| +|+. ++|.. .++.|.|+|..+.+
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 487 FKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp EEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 01111 011246778888 5654 44432 47999999987753
No 171
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=8e-15 Score=131.89 Aligned_cols=231 Identities=11% Similarity=0.041 Sum_probs=168.5
Q ss_pred ceeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEe-cCCeEEEEECCCCceeeecCCC
Q 014590 114 GVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGL-IGTRICIWRRNGLRSVFPSREG 191 (422)
Q Consensus 114 ~v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~w~~~~~~~~~~~~~~ 191 (422)
....+.+.++ ..++...++.|.+||..+++.+.++........+++++++..+++. .++.|.+||..+.+.......+
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 4566777666 5556666899999999999999998766677779999998544555 6899999999988754222212
Q ss_pred c------eeeeEEEeeeCCeEEEec--CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCC---------
Q 014590 192 T------FMKGLCMRYFDPEAVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL--------- 253 (422)
Q Consensus 192 ~------~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d--------- 253 (422)
. ....+++ .+..++++. .++.|.++|+.+++.+..+.... ....++++|+ ++++++..+
T Consensus 125 ~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 125 DMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYE 201 (328)
T ss_dssp TCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBC
T ss_pred CccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccC
Confidence 2 2223444 566655554 48899999999999888776433 3467888887 444444433
Q ss_pred -CcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeee--eccCCCceeeeeeEec-C
Q 014590 254 -GSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWE--TRISPNVVYSLQHLQN-D 321 (422)
Q Consensus 254 -g~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~s~-~ 321 (422)
+.|.++|..+++.. ..+..++++|+++.++++.. .|.+||..+++.... +..+......++ ++| +
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~-vdp~~ 278 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT-VNPNN 278 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE-ECTTT
T ss_pred CceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE-EcCCC
Confidence 78999999887755 25789999999999988765 799999988775422 122235678898 998 5
Q ss_pred CCEEEEE----ecCCeEEEEECCCCceEEEeeec
Q 014590 322 TSTLVVG----GIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 322 ~~~l~s~----~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
+...++. ..++.|.+||.. ++.+.++...
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE
T ss_pred CeEEEEcccccccCCEEEEECCC-CCEEEEEEec
Confidence 5555665 578999999998 9988888653
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=4.7e-14 Score=124.28 Aligned_cols=226 Identities=10% Similarity=0.128 Sum_probs=159.2
Q ss_pred ceeeEEEecCCCeEE-EecCCeEEEEECCCCceeeecC----CCc--eeeeEEEeeeCCeEEEec-C-CCeEEEEeCCCc
Q 014590 153 AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSR----EGT--FMKGLCMRYFDPEAVVGC-E-DGTARVFDMYSR 223 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~l~~~~-~-d~~i~iwd~~~~ 223 (422)
....+++++++..++ ...++.|.+||.++........ .++ ....+++...+..++++. . ++.|.+|| .++
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g 109 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYG 109 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTS
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCC
Confidence 345688999998777 4678999999988543221111 111 222344422233444444 2 88999999 567
Q ss_pred ceeeeeec-CCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEE
Q 014590 224 KCSQIIRM-HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYAS 292 (422)
Q Consensus 224 ~~~~~~~~-~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~ 292 (422)
+.+..+.. +...+..++++|+ +++++...++.|.+||.. ++.. ..+..++++|+|+++++...++.|+
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 77666642 3456889999976 677777778999999964 3332 4588999999999888888899999
Q ss_pred EEECCCCeeeeeeccC--CCceeeeeeEecCCCEEEEEecCC-eEEEEECCCCceEEEeeecCCcccccCCCCCCeEEee
Q 014590 293 CWDLRTMKSLWETRIS--PNVVYSLQHLQNDTSTLVVGGIDG-VLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERN 369 (422)
Q Consensus 293 iwd~~~~~~~~~~~~~--~~~v~~l~~~s~~~~~l~s~~~dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~ 369 (422)
+||.. ++.+..+..+ ...+..++ ++++|+++++...++ .|.+||. +++.+..+..+..
T Consensus 189 ~~~~~-g~~~~~~~~~g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~---------------- 249 (286)
T 1q7f_A 189 VFNYE-GQYLRQIGGEGITNYPIGVG-INSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVK---------------- 249 (286)
T ss_dssp EEETT-CCEEEEESCTTTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSC----------------
T ss_pred EEcCC-CCEEEEEccCCccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCC----------------
Confidence 99975 5566566443 35688998 999999888888776 9999995 4777777654322
Q ss_pred eccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 370 EGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 370 ~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
...+.++++ +++++++ +.|++|++|++...
T Consensus 250 ------------------~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 ------------------HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ------------------CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ------------------CCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 124667888 5777777 67999999998654
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=8.1e-15 Score=128.10 Aligned_cols=227 Identities=11% Similarity=0.054 Sum_probs=171.4
Q ss_pred CCeEEEEecCCeEEEEEcCCCeEEEeeeCCC--ceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCC--CceeeeE
Q 014590 122 RGLILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSRE--GTFMKGL 197 (422)
Q Consensus 122 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~--~~~~~~~ 197 (422)
+++|++++.|+.|.+||.++|+.+.++..+. ....++++|+|+.++ +.++.|..||. +++.+..... .......
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 3489999999999999999999999998764 466789999999888 56888999999 6665543332 2334455
Q ss_pred EEeeeCCeEEEecC-CCeEEEEeCCCcceeeeeec------CCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--
Q 014590 198 CMRYFDPEAVVGCE-DGTARVFDMYSRKCSQIIRM------HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-- 267 (422)
Q Consensus 198 ~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-- 267 (422)
...+++..+++.+. ++.|..+|. +|+.+..+.. +......++..++ +++++...++.|..||.. |+.+
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 56667777887776 778888886 6877766642 1123444556665 889999999999999987 8877
Q ss_pred ----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCC------CceeeeeeEecCCCEEEEEecC------
Q 014590 268 ----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISP------NVVYSLQHLQNDTSTLVVGGID------ 331 (422)
Q Consensus 268 ----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~l~~~s~~~~~l~s~~~d------ 331 (422)
..+.++...++|+.++++..++.|..+|..+++.++++..+. ..+.++. ..++|..+++....
T Consensus 161 ~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~ 239 (276)
T 3no2_A 161 VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF-PLQNGGLYICNWQGHDREAG 239 (276)
T ss_dssp EECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGG
T ss_pred EECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccce-EcCCCCEEEEeccCcccccc
Confidence 467778888999999999988899999999999998886432 2367777 77899988876421
Q ss_pred --CeEEEEEC-CCCceEEEeeecCC
Q 014590 332 --GVLRVLDQ-NTGEVLSRCVMDIG 353 (422)
Q Consensus 332 --g~v~vwd~-~~~~~~~~~~~~~~ 353 (422)
+..+++++ .+|+.+.++.....
T Consensus 240 ~~~~~~~~~~~~~g~~~W~~~~~~~ 264 (276)
T 3no2_A 240 KGKHPQLVEIDSEGKVVWQLNDKVK 264 (276)
T ss_dssp GSCCCSEEEECTTSBEEEEECCTTT
T ss_pred ccCCceEEEECCCCCEEEEecCccc
Confidence 23456666 57888888866544
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=1.4e-14 Score=131.94 Aligned_cols=246 Identities=9% Similarity=-0.011 Sum_probs=174.7
Q ss_pred cCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCceee--ecC-----CC
Q 014590 130 GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVF--PSR-----EG 191 (422)
Q Consensus 130 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~~~~--~~~-----~~ 191 (422)
.|+.|.+||..+++.+..+..+... .++|+||+++++ +. .++.|.+||..+.+.+. ... .+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 4789999999999999888876655 899999999998 43 25679999998876442 221 12
Q ss_pred ceeeeEEEeeeCCeEEEecC--CCeEEEEeCCCcceeee-eecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCC-Cc
Q 014590 192 TFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSS-DQ 265 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~-~~ 265 (422)
.....+.++++++.++++.. ++.|.+||+.+++.+.. +... + ...+.+.|+ ..+++.+.||.+.++++.. ++
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 23446788889998887763 68999999999988877 5432 2 223445554 5788888999999998764 33
Q ss_pred cc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee--eeeecc------CC----CceeeeeeEecC
Q 014590 266 RL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS--LWETRI------SP----NVVYSLQHLQND 321 (422)
Q Consensus 266 ~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~------~~----~~v~~l~~~s~~ 321 (422)
.. .....+.++|++..++..+.++.|.++|+..... ...+.. +. .....++ ++|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a-~~~d 264 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG-LHRA 264 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE-EETT
T ss_pred EeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE-EecC
Confidence 21 1111233467787888888899999999875432 111110 00 1112366 8999
Q ss_pred CCEEEEEec-----------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCC
Q 014590 322 TSTLVVGGI-----------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPP 390 (422)
Q Consensus 322 ~~~l~s~~~-----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~ 390 (422)
++.++++.. ++.|.+||+.+++.+.++..+ .
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~------------------------------------~-- 306 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR------------------------------------D-- 306 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT------------------------------------T--
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC------------------------------------C--
Confidence 888777653 358999999999998888552 2
Q ss_pred eEEEEe--cCEEEEEEeCCCeEEEEEccCC
Q 014590 391 ITCLAV--GMKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 391 v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
+.+++| |+++|++++. ++|.+||..++
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 677778 6888888886 99999998876
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=2.6e-14 Score=129.52 Aligned_cols=253 Identities=11% Similarity=0.012 Sum_probs=165.3
Q ss_pred cceeEEEecCC-eEEEE---------ecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC---C--eEEE
Q 014590 113 VGVDQCRMKRG-LILTG---------VGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG---T--RICI 176 (422)
Q Consensus 113 ~~v~~v~~~~~-~l~s~---------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~---~--~i~~ 176 (422)
..+....+ || +++.. +.++.|.+||+.+++... + ......+|+|||+.|+ ++.+ + .|.+
T Consensus 15 ~~~~~~~~-dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 15 AYLSDPRT-KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I---ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp CEEEEEEE-ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E---ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EEcccceE-CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c---ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 34556666 66 55443 226789999999887543 3 3456689999999988 4432 3 4888
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecC---------------------------CCeEEEEeCCCcceeeee
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE---------------------------DGTARVFDMYSRKCSQII 229 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------------------d~~i~iwd~~~~~~~~~~ 229 (422)
|++.+++......... .....+++++..|+.++. ...|.+||+.+++.+..+
T Consensus 90 ~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 90 ADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp EETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred EECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 8888876432221122 556778888888777653 257999999888774555
Q ss_pred ecCCccEEEEEecCCCEEEEEcCCC-------cEEEEeCCCCccc---cceEeEEEecCCCEEEEEeCC--------CeE
Q 014590 230 RMHCAPVTSLSLSEDQLIISGSSLG-------SIAISGLSSDQRL---TGIKTLCYNPCSRLVFAGTTA--------GYA 291 (422)
Q Consensus 230 ~~~~~~v~~l~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~---~~v~~~~~~~~~~~l~~g~~d--------g~i 291 (422)
.. . .+..++|+|+.+++++..++ ...+|.+.+++.. .......++|+|++|+.++.+ ..|
T Consensus 169 ~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 169 EK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp EE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEE
T ss_pred cC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEEeccCcceeeECCCCCEEEEEEccccCCccccceE
Confidence 44 3 77889999877555554432 3344443344332 112223348999988877744 478
Q ss_pred EEEECCCCeeeeeeccCCCceee-eeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeee
Q 014590 292 SCWDLRTMKSLWETRISPNVVYS-LQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNE 370 (422)
Q Consensus 292 ~iwd~~~~~~~~~~~~~~~~v~~-l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~ 370 (422)
.+|| +++.......+...+.. +. |+ ++ ++++++.++.+++| +.+++... +..+
T Consensus 247 ~~~d--~~~~~~l~~~~~~~~~~~~~-~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~------------------- 300 (347)
T 2gop_A 247 YIYD--GKEVMGILDEVDRGVGQAKI-KD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKG------------------- 300 (347)
T ss_dssp EEEC--SSCEEESSTTCCSEEEEEEE-ET-TE-EEEEEEETTEEEEE-EESSSEEE-EECS-------------------
T ss_pred EEEC--CCceEeccccCCcccCCccE-Ec-Cc-EEEEEecCCcEEEE-EcCCceEE-EecC-------------------
Confidence 8888 56555445566777886 77 88 88 89999999999999 87555432 2221
Q ss_pred ccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeE-EEEEcc
Q 014590 371 GRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYI-RLWKFN 416 (422)
Q Consensus 371 ~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i-~iW~~~ 416 (422)
...|.+++|++..+++++.++.. .+|.++
T Consensus 301 -----------------~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 301 -----------------RHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -----------------SSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred -----------------CCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 24677788854666777777765 788765
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=4.3e-14 Score=127.06 Aligned_cols=245 Identities=10% Similarity=-0.034 Sum_probs=169.3
Q ss_pred CCeEEEEEcCCCeEEEeeeC-------CCceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEee
Q 014590 131 DKVMRLWSLEGYKCVEEYSL-------PNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY 201 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (422)
+++|.++|.++++....+.. ......+.+ ++..+. ...++.|.++|..+++.+...........+++..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 88999999999998765521 112233555 344443 5567999999999887653333333344566655
Q ss_pred eCCeEEEec-CCCeEEEEeCCCcceeeeeecCC-----ccEEEEEecCCCEEEEEc--CCCcEEEEeCCCCccc------
Q 014590 202 FDPEAVVGC-EDGTARVFDMYSRKCSQIIRMHC-----APVTSLSLSEDQLIISGS--SLGSIAISGLSSDQRL------ 267 (422)
Q Consensus 202 ~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~~l~s~~--~dg~i~iwd~~~~~~~------ 267 (422)
.+ .++++. .++.|.+||+.+++....+.... .....+++ .++.++++. .++.|.++|+.+++..
T Consensus 94 ~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 65 555554 78999999999998877765433 13456777 454444444 4889999999988765
Q ss_pred cceEeEEEecCCCEEEEEeCC----------CeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTA----------GYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRV 336 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~d----------g~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~v 336 (422)
.....++++|+|++++++..+ +.|.++|..+++....+.... .....++ ++|++++|+++.. .|.+
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la-~~~d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQ-LNGTRDTLYWINN--DIWR 248 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEE-ECTTSCEEEEESS--SEEE
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEE-EecCCCEEEEEcc--EEEE
Confidence 456789999999877776554 789999999988876665432 3578898 9999998888755 7999
Q ss_pred EECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec---CEEEEEE----eCCCe
Q 014590 337 LDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---MKKVVTT----HNSKY 409 (422)
Q Consensus 337 wd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~~~l~s~----s~Dg~ 409 (422)
||..+++....... ..+.....+++++ +..+++. ..++.
T Consensus 249 ~d~~t~~~~~~~~~----------------------------------~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 249 MPVEADRVPVRPFL----------------------------------EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp EETTCSSCCSSCSB----------------------------------CCCSSCEEEEEECTTTCCEEEEECTTSSSEEE
T ss_pred EECCCCceeeeeee----------------------------------cCCCCceEEEEEcCCCCeEEEEcccccccCCE
Confidence 99987765311000 0012356778883 4666666 67889
Q ss_pred EEEEEcc
Q 014590 410 IRLWKFN 416 (422)
Q Consensus 410 i~iW~~~ 416 (422)
|.+|+.+
T Consensus 295 V~v~d~~ 301 (328)
T 3dsm_A 295 VYRYSPQ 301 (328)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999987
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=4.9e-14 Score=129.80 Aligned_cols=209 Identities=12% Similarity=-0.000 Sum_probs=146.8
Q ss_pred EEEEcCCCeEEEeeeCCCc-eee-----EEEecCCCeEE-Eec-CC--eEEEEECCCCceeeec-CCCceeeeEEEeeeC
Q 014590 135 RLWSLEGYKCVEEYSLPNA-ASL-----VDFDFDESKIV-GLI-GT--RICIWRRNGLRSVFPS-REGTFMKGLCMRYFD 203 (422)
Q Consensus 135 ~iwd~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~l~-~~~-~~--~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~ 203 (422)
..+|..++..+..+..+.. ... .+|+|||+.|+ ++. ++ .|.+||+.+++..... ..+.......+++++
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 3457777877777766543 222 67999999988 554 55 4888899887754222 222222245788889
Q ss_pred CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEe--cCC-CEEEE----------------------EcCCCcEEE
Q 014590 204 PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSL--SED-QLIIS----------------------GSSLGSIAI 258 (422)
Q Consensus 204 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~--~~~-~~l~s----------------------~~~dg~i~i 258 (422)
..|+.++.++.|++||+.+++....+..+...+....+ +|+ ..++. ...+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999999999999999999877777766665544443 566 55542 224578999
Q ss_pred EeCCCCccc------cceEeEEEec-CCCEEEEEeCC------CeEEEEECCCCeeeeeeccCC--CceeeeeeEecCCC
Q 014590 259 SGLSSDQRL------TGIKTLCYNP-CSRLVFAGTTA------GYASCWDLRTMKSLWETRISP--NVVYSLQHLQNDTS 323 (422)
Q Consensus 259 wd~~~~~~~------~~v~~~~~~~-~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~~--~~v~~l~~~s~~~~ 323 (422)
||+.+++.. ..+..++|+| ||+.|+....+ ..|.++|...++. ..+..+. ..+.... |+|||+
T Consensus 173 ~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~-~spdg~ 250 (388)
T 3pe7_A 173 VDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEF-WVPDGS 250 (388)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEE-ECTTSS
T ss_pred EECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccce-ECCCCC
Confidence 999988755 5688999999 99998877753 3788888875543 3443443 3577788 999999
Q ss_pred EEEEEec-C----CeEEEEECCCCceE
Q 014590 324 TLVVGGI-D----GVLRVLDQNTGEVL 345 (422)
Q Consensus 324 ~l~s~~~-d----g~v~vwd~~~~~~~ 345 (422)
.|+..+. + +.|++||+.+++..
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred EEEEEecCCCCCcceEEEEecCCCceE
Confidence 7765443 2 24999999988753
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=2.5e-14 Score=143.11 Aligned_cols=186 Identities=7% Similarity=-0.034 Sum_probs=137.2
Q ss_pred eeeEEEecCCCeEEEecCCeEEEEECCCCcee--eecCCCce--ee--eEEEeeeCCeEEEecCC---------CeEEEE
Q 014590 154 ASLVDFDFDESKIVGLIGTRICIWRRNGLRSV--FPSREGTF--MK--GLCMRYFDPEAVVGCED---------GTARVF 218 (422)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~--~~~~~~~~--~~--~~~~~~~~~~l~~~~~d---------~~i~iw 218 (422)
...+.|+||+.+++.+ +++|++||+.+++.. +..+.... .. ...+++++..|+.++.+ +.+.+|
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 4468999999888765 999999999988743 33333221 11 26788888888888876 566799
Q ss_pred eCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cce-----------------Ee
Q 014590 219 DMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGI-----------------KT 272 (422)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v-----------------~~ 272 (422)
|+.+++... +..|.+.+...+|+|+ +.++.+ .++.|++||+.++... ..+ ..
T Consensus 98 d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 98 DLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp ETTTTEECC-SSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred ECCCCcEEE-cccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 999887654 5667788999999998 677776 5789999999877644 112 24
Q ss_pred EEEecCCCEEEEEeCCC------------------------------------eEEEEECCC---Ce--eeeeec-----
Q 014590 273 LCYNPCSRLVFAGTTAG------------------------------------YASCWDLRT---MK--SLWETR----- 306 (422)
Q Consensus 273 ~~~~~~~~~l~~g~~dg------------------------------------~i~iwd~~~---~~--~~~~~~----- 306 (422)
+.|||||+.|+.++.|. .|++||+.+ ++ ....+.
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence 89999999999875221 588899988 73 222333
Q ss_pred -cCCCceeeeeeEecCCCEEEEEec----CCeEEEEECCCCc
Q 014590 307 -ISPNVVYSLQHLQNDTSTLVVGGI----DGVLRVLDQNTGE 343 (422)
Q Consensus 307 -~~~~~v~~l~~~s~~~~~l~s~~~----dg~v~vwd~~~~~ 343 (422)
+|...+..++ |+|||+.++.... +..|.+||+.+++
T Consensus 256 ~~~~~~~~~~~-wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 256 LIGDHYLCDVT-WATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HTSCEEEEEEE-EEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCCeEEEEEE-EeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3777899999 9999997665543 3479999999887
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.64 E-value=3.2e-13 Score=121.70 Aligned_cols=232 Identities=9% Similarity=-0.010 Sum_probs=155.3
Q ss_pred cceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEeeeCC-CceeeEEEecCCCeEE-EecCCeEEEEECCCCcee-ee
Q 014590 113 VGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-FP 187 (422)
Q Consensus 113 ~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~-~~ 187 (422)
..|.+++|. ++ .++..+.++.++.| .++....+..+ .....++|+++++.++ +..++.|.+||.++++.. +.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 346777784 33 56666778899999 34555555543 3456689999999776 567889999999877643 22
Q ss_pred cCCCceeeeEEEeeeCCeEEEecCC----CeEEEEeCCCcceeeeee--cCCccEEEEEecCC-CEEEEEcC------CC
Q 014590 188 SREGTFMKGLCMRYFDPEAVVGCED----GTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSS------LG 254 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~l~s~~~------dg 254 (422)
.........+++.+++..+++...+ +.|.+||..+++....+. .+...+.+++++|+ +++++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 1223334455666566556665555 689999998776543332 23457899999987 55554443 35
Q ss_pred cEEEEeCCCCccc------cceEeEEEecCCCEEEEE-eCCCeEEEEECCC-Ceeee--------eeccCCCceeeeeeE
Q 014590 255 SIAISGLSSDQRL------TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRT-MKSLW--------ETRISPNVVYSLQHL 318 (422)
Q Consensus 255 ~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~-~~~~~--------~~~~~~~~v~~l~~~ 318 (422)
.|..+|..+++.. ..+..++|+|+|+.++++ +.++.|.+||+.+ +..+. .+.++ ..+..++ +
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~-~ 240 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC-I 240 (333)
T ss_dssp EEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE-E
T ss_pred eEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE-E
Confidence 6777776654432 467889999999866544 5678999999863 33221 11222 4677888 9
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+++|+++++...++.|.+||. +++.+..+..
T Consensus 241 d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 241 DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp BTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred CCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 999998888778899999998 4776666643
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=1.8e-11 Score=108.14 Aligned_cols=231 Identities=9% Similarity=-0.023 Sum_probs=157.8
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEee-e-CCCceeeEEEecCCCeEEEec-CCeEEEEECCC
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEY-S-LPNAASLVDFDFDESKIVGLI-GTRICIWRRNG 181 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~-~~~i~~w~~~~ 181 (422)
.+..+...+.++++ ++| ..++...++.|.+||.. ++..... . .......+++++++..+++.. ++.|..|+...
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 87 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG 87 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC
Confidence 45567778999999 566 44444447899999988 5543322 1 223456688999998877554 78899999874
Q ss_pred CceeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEEEEEcCCCcEEE
Q 014590 182 LRSVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAI 258 (422)
Q Consensus 182 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~i 258 (422)
....+... .......+++...+..+++...++.|..||. +++.... ...+...+..+++.++ .+.++...++.|..
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 33333321 2233334455444544566666889999998 5554332 2234456889999877 56666666789999
Q ss_pred EeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee-eeccCCCceeeeeeEecCCCEEEEEe
Q 014590 259 SGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW-ETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 259 wd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
||. +++.. ..+..++++++|++.++...++.|.+||. +++... ....+...+.+++ ++++|+..++..
T Consensus 167 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~ 243 (299)
T 2z2n_A 167 ITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAIT-AGAGIDLWFTEW 243 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECSTTCEEEEET
T ss_pred EcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEE-ECCCCCEEEecc
Confidence 998 55433 45789999999997777767889999999 665432 2233446788998 999998777666
Q ss_pred cCCeEEEEECCCCc
Q 014590 330 IDGVLRVLDQNTGE 343 (422)
Q Consensus 330 ~dg~v~vwd~~~~~ 343 (422)
.++.|.+||. +++
T Consensus 244 ~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 244 GANKIGRLTS-NNI 256 (299)
T ss_dssp TTTEEEEEET-TTE
T ss_pred CCceEEEECC-CCc
Confidence 7889999998 453
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.62 E-value=5.3e-13 Score=131.93 Aligned_cols=239 Identities=10% Similarity=-0.018 Sum_probs=159.1
Q ss_pred eeEEeecccccee---------EEEe---cCC-e-EEEEec-CCeEEEEEcC--C-CeEEEeeeC-----C-CceeeEEE
Q 014590 104 DIDQWKAHSVGVD---------QCRM---KRG-L-ILTGVG-DKVMRLWSLE--G-YKCVEEYSL-----P-NAASLVDF 159 (422)
Q Consensus 104 ~~~~l~~H~~~v~---------~v~~---~~~-~-l~s~~~-dg~v~iwd~~--~-~~~~~~~~~-----~-~~~~~~~~ 159 (422)
..+++.+|...+. ...+ ||| . |+.++. +..|.++++. + ++. ..+.. + .....++|
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEE
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEE
Confidence 4566777776665 5534 566 6 665554 5567777765 3 443 33333 2 23455999
Q ss_pred ecCCCeEE-EecC----------CeEEEEECCC------Cceeeec-CCCceeeeEEEeeeCCeEEEecCC--------C
Q 014590 160 DFDESKIV-GLIG----------TRICIWRRNG------LRSVFPS-REGTFMKGLCMRYFDPEAVVGCED--------G 213 (422)
Q Consensus 160 ~~~~~~l~-~~~~----------~~i~~w~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d--------~ 213 (422)
+|||+.|+ ++.+ ..|++||+.+ +...... ..........+++++..|+.++.+ .
T Consensus 138 spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 138 LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 99999998 5554 5899999988 5433222 222344557788888888877654 4
Q ss_pred eEEEEeCC-Cc---ceeeeeecCCccEEEEEecCC-CEEEEEcCCC--cEEEEeCCCCccc-------c--------ceE
Q 014590 214 TARVFDMY-SR---KCSQIIRMHCAPVTSLSLSED-QLIISGSSLG--SIAISGLSSDQRL-------T--------GIK 271 (422)
Q Consensus 214 ~i~iwd~~-~~---~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg--~i~iwd~~~~~~~-------~--------~v~ 271 (422)
.|.+||+. ++ +.......|...+..+.|+|+ ++++++..++ .|.+||+.+++.. . .+.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCC
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCc
Confidence 89999998 56 444445556788999999987 7777777788 6777777565533 1 156
Q ss_pred eEEEecCCCEEEEEeCCCeEEEE--ECCCCeeeeeeccCCCceeee-eeEecCCCEEEEEecCC--eEEEEECCCCceEE
Q 014590 272 TLCYNPCSRLVFAGTTAGYASCW--DLRTMKSLWETRISPNVVYSL-QHLQNDTSTLVVGGIDG--VLRVLDQNTGEVLS 346 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~dg~i~iw--d~~~~~~~~~~~~~~~~v~~l-~~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~ 346 (422)
.++|+|+++++++++. +.++|| |+.+++ +..+..|...+..+ + ++.+.-.+++++.+. .|.++|+.+++...
T Consensus 298 ~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 298 WFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLT-VSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp SEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEE-EETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred eEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEe-cCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 8999999999999998 988888 665555 56777777777766 4 433322344445454 46666777776543
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=2.9e-13 Score=134.78 Aligned_cols=232 Identities=10% Similarity=0.025 Sum_probs=162.6
Q ss_pred ccccceeEEEe-cCC-eEEEEecCC-----eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCCe--------
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDK-----VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTR-------- 173 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-------- 173 (422)
+|...+..++| +|| +|+.++.++ .|++||+.+++.+.....+.....++|+|||+.|+ ++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 35456788888 577 777665433 89999999998876433332345699999999988 666554
Q ss_pred --------EEEEECCCCce---e-eecCC-CceeeeEEEeeeCCeEEEecC-----CCeEEEEeCCC------cc-eeee
Q 014590 174 --------ICIWRRNGLRS---V-FPSRE-GTFMKGLCMRYFDPEAVVGCE-----DGTARVFDMYS------RK-CSQI 228 (422)
Q Consensus 174 --------i~~w~~~~~~~---~-~~~~~-~~~~~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~~ 228 (422)
|++|++.++.. + +.... ........+++++..|+.++. +..|.+||+.+ ++ ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999988762 2 22221 222345677888888766654 57899999976 43 3555
Q ss_pred eecCCccEEEEEecC-CCEEEEEcCC----CcEEEEeCCCCcc-----c------cceEeEEEecCCCEEEEEeCCCe--
Q 014590 229 IRMHCAPVTSLSLSE-DQLIISGSSL----GSIAISGLSSDQR-----L------TGIKTLCYNPCSRLVFAGTTAGY-- 290 (422)
Q Consensus 229 ~~~~~~~v~~l~~~~-~~~l~s~~~d----g~i~iwd~~~~~~-----~------~~v~~~~~~~~~~~l~~g~~dg~-- 290 (422)
+..+...+... ++| ++.++..+.. +.|.+||+.++.. + ..+..++|++++.++++...++.
T Consensus 282 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 66666666553 554 4555554432 3699999987642 2 25778899878888888888884
Q ss_pred EEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe----cCCeEEEEECCCCc
Q 014590 291 ASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG----IDGVLRVLDQNTGE 343 (422)
Q Consensus 291 i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~----~dg~v~vwd~~~~~ 343 (422)
|.+||+.+++.+..+..+.+.+..+. ++|+++.++... ..++|+.||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSVVGYS-GQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEEEEEE-CCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCceEEEEe-cCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 66678767877778877778888888 889987665332 35799999998877
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=1.1e-12 Score=116.13 Aligned_cols=237 Identities=11% Similarity=0.001 Sum_probs=167.5
Q ss_pred ccccceeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeCCC-ceeeEEEecCCCeEEEec-CC
Q 014590 98 LEEGRIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIVGLI-GT 172 (422)
Q Consensus 98 ~~~~~~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~-~~ 172 (422)
+...+..+..+..+.....+++| ++| +++++..++.|..||..++ ...+..+. .+..++++++|+.+++.. ++
T Consensus 13 ~~~~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~ 90 (296)
T 3e5z_A 13 LFPAGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLR 90 (296)
T ss_dssp GSCTTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTT
T ss_pred hcCCCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCC
Confidence 34445667788888888899999 455 6888888999999999987 55555443 355699999999887554 58
Q ss_pred eEEEEECCCCcee-ee-cCCCc---eeeeEEEeeeCCeEEE----ec-------------CCCeEEEEeCCCcceeeeee
Q 014590 173 RICIWRRNGLRSV-FP-SREGT---FMKGLCMRYFDPEAVV----GC-------------EDGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 173 ~i~~w~~~~~~~~-~~-~~~~~---~~~~~~~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~~~~ 230 (422)
.|.+||..+++.. +. ...+. ....+++.+.+..+++ |+ ..+.|..++.. ++. ..+.
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~ 168 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI 168 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee
Confidence 9999999766532 21 11111 1234566666665665 33 13466666665 443 3444
Q ss_pred cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCC-CCcc-c---------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLS-SDQR-L---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 231 ~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~-~~~~-~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
.+......++|+|+ +.+++.+.++.|.+||+. ++.. . ..+..++++++|++.++. ++.|.+||..
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 55667789999987 666777888999999986 4443 1 345689999999866666 7889999987
Q ss_pred CeeeeeeccCCCceeeeeeE-ecCCCEEEEEecCCeEEEEECCCCce
Q 014590 299 MKSLWETRISPNVVYSLQHL-QNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 299 ~~~~~~~~~~~~~v~~l~~~-s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
++.+..+..+.. +++++ | +|+++.|++++.++ +.-++..+.+.
T Consensus 246 g~~~~~~~~~~~-~~~~~-f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLC-FGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp SCEEEEEECSSC-CCEEE-EESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred CCEEEEEECCCC-ceeEE-EECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 777778877777 89998 7 58999898888765 55566665443
No 184
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.61 E-value=1.5e-12 Score=119.44 Aligned_cols=257 Identities=12% Similarity=0.065 Sum_probs=174.6
Q ss_pred EEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceee--
Q 014590 118 CRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMK-- 195 (422)
Q Consensus 118 v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~-- 195 (422)
....++.++.++.++.|..+|.++|+.+..+..+..........++..++++.++.+..+|..+++.+..........
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence 344677888899999999999999999888776543322222235555558889999999999888664433221110
Q ss_pred --eEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCcc----EEE---EEecC---CCEEEEEcCCCcEEEEeCCC
Q 014590 196 --GLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAP----VTS---LSLSE---DQLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 196 --~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----v~~---l~~~~---~~~l~s~~~dg~i~iwd~~~ 263 (422)
.......+..++.++.++.+..+|..+|+.+......... +.. +...| ++.++.++.++.+..+|..+
T Consensus 179 ~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 179 RGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred cCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence 0111223556888899999999999999988776532110 000 11112 46788888899999999999
Q ss_pred Cccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 264 DQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 264 ~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
++.+ .....+.. ++..+++++.++.|..+|..+++.+..... ....+.... . .+..|+.++.+|.|+++
T Consensus 259 G~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~-~--~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 259 GQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPV-L--YNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp CCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCE-E--ETTEEEEECTTSEEEEE
T ss_pred CcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCE-E--ECCEEEEEeCCCeEEEE
Confidence 9876 33344443 467888888899999999999998877662 223333333 3 35678889999999999
Q ss_pred ECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEE
Q 014590 338 DQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWK 414 (422)
Q Consensus 338 d~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~ 414 (422)
|..+|+.+..+..... .........+..|+.++.||.|..|+
T Consensus 334 d~~tG~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 334 NVEDGRFVAQQKVDSS-----------------------------------GFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ETTTCCEEEEEECCTT-----------------------------------CBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred ECCCCcEEEEEecCCC-----------------------------------cceeCCEEECCEEEEEeCCCEEEEEe
Confidence 9999998877654222 01111222355677888999998886
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=4.2e-13 Score=116.95 Aligned_cols=230 Identities=7% Similarity=-0.042 Sum_probs=156.4
Q ss_pred ceeEEEe-cCC-eEE-EEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeec-
Q 014590 114 GVDQCRM-KRG-LIL-TGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS- 188 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~-s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~- 188 (422)
...++++ ++| +++ +...++.|.+||..++........ ......++++++++.+++..++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 6678888 566 444 436788999999876543322112 23456699999999767665889999998876543222
Q ss_pred CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc
Q 014590 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
........+++.+.+..+++...++.|.+|+..+.............+..++++++ +++++...++.|.+||.......
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 11123345556555655666667889999986554433222223345678999876 66666667889999998765543
Q ss_pred -------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 268 -------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 268 -------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
..+..++++++|.++++...++.|.+||............+...+.+++ ++++|+.+++...++.|+++++.
T Consensus 185 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 185 VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA-VDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEE-ECTTCCEEEEEGGGTEEEEECCC
T ss_pred eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEE-ECCCCCEEEEECCCCEEEEEcCC
Confidence 5688999999998777777788999999876543332223335688998 99999988888899999999987
Q ss_pred CCce
Q 014590 341 TGEV 344 (422)
Q Consensus 341 ~~~~ 344 (422)
..+.
T Consensus 264 ~~~~ 267 (270)
T 1rwi_B 264 EHHH 267 (270)
T ss_dssp GGGS
T ss_pred Cccc
Confidence 5543
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.61 E-value=7.3e-13 Score=115.67 Aligned_cols=181 Identities=10% Similarity=0.058 Sum_probs=141.2
Q ss_pred CCeEE-EecCCeEEEEECCCCceeeecCCC--ceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC-ccEEE
Q 014590 163 ESKIV-GLIGTRICIWRRNGLRSVFPSREG--TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-APVTS 238 (422)
Q Consensus 163 ~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~ 238 (422)
++.++ ++.++.|.+||.++++.+.....+ .......+.++++.++ +.++.|..||. +|+.+..+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 34455 778999999999898876544332 2344566777777666 45788999999 899999988653 46888
Q ss_pred EEecCC-CEEEEEcC-CCcEEEEeCCCCccc-------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 239 LSLSED-QLIISGSS-LGSIAISGLSSDQRL-------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 239 l~~~~~-~~l~s~~~-dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
+.+.++ +.+++.+. ++.+..+|. +|+.+ .....+++.++|+++++...++.|..||.. |+.++
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 888877 77777776 777888875 56544 234456788999999999999999999998 99999
Q ss_pred eeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 304 ETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 304 ~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
++..+ ..+.++. ..++|+.+++++.++.|..+|..+|+.+.++..
T Consensus 160 ~~~~~-~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 160 SVKLS-GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 204 (276)
T ss_dssp EEECS-SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG
T ss_pred EEECC-CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC
Confidence 98765 3456676 778999999999899999999999999999864
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=9e-14 Score=128.27 Aligned_cols=210 Identities=8% Similarity=-0.108 Sum_probs=142.2
Q ss_pred EEEEcCCCeEEEeeeCCCc------eeeEEEecCCCeEE-Eec---CCeEEEEECCCCceeeec-CCCceeeeEEEeeeC
Q 014590 135 RLWSLEGYKCVEEYSLPNA------ASLVDFDFDESKIV-GLI---GTRICIWRRNGLRSVFPS-REGTFMKGLCMRYFD 203 (422)
Q Consensus 135 ~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~-~~~---~~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~ 203 (422)
...|..+++.+..+..+.. ...++|+|||+.|+ +.. +..|.+||+.+++..... ..........+++++
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 3457788887777765422 34478999999987 433 247888999887643222 222222236678888
Q ss_pred CeEEEecCCCeEEEEeCCCcceeeeeecCCccEEE-------------------EEecCC-CEEEEE-----cCCCcEEE
Q 014590 204 PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTS-------------------LSLSED-QLIISG-----SSLGSIAI 258 (422)
Q Consensus 204 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~-------------------l~~~~~-~~l~s~-----~~dg~i~i 258 (422)
..|+.++.++.|.+||+.+++.......+...... +.++|+ +.++.+ ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 88988888999999999988776665545443322 234454 333332 35668999
Q ss_pred EeCCCCccc------cceEeEEEec-CCCEEEEEeCC------CeEEEEECCCCeeeeeeccC--CCceeeeeeEecCCC
Q 014590 259 SGLSSDQRL------TGIKTLCYNP-CSRLVFAGTTA------GYASCWDLRTMKSLWETRIS--PNVVYSLQHLQNDTS 323 (422)
Q Consensus 259 wd~~~~~~~------~~v~~~~~~~-~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~s~~~~ 323 (422)
||+.+++.. ..+..+.|+| +++.++..+.+ ..|.+||+.+++.. .+..+ ...+..+. |+|+|+
T Consensus 173 ~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~-~spdg~ 250 (396)
T 3c5m_A 173 VDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEF-WIPDGS 250 (396)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEE-ECTTSS
T ss_pred EECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceE-ECCCCC
Confidence 999887654 5688899999 78877766543 36889998765433 23223 23577788 999999
Q ss_pred EEEEEecC-----CeEEEEECCCCceEE
Q 014590 324 TLVVGGID-----GVLRVLDQNTGEVLS 346 (422)
Q Consensus 324 ~l~s~~~d-----g~v~vwd~~~~~~~~ 346 (422)
+|+.++.+ +.|++||+.+++...
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCEEE
T ss_pred EEEEEecCCCCccceEEEEECCCCCeEE
Confidence 88777654 559999998876543
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=1.2e-12 Score=114.11 Aligned_cols=228 Identities=8% Similarity=-0.027 Sum_probs=155.9
Q ss_pred ceeeEEEecCCCeEE-E-ecCCeEEEEECCCCceeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee
Q 014590 153 AASLVDFDFDESKIV-G-LIGTRICIWRRNGLRSVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~-~-~~~~~i~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
....++++++++.++ + ..++.|..|+..+........ .......+++...+..+++.. ++.|.+||...+... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 556689999998776 6 567899999987655332211 112233556655555444444 889999998655433 23
Q ss_pred e-cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe
Q 014590 230 R-MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK 300 (422)
Q Consensus 230 ~-~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 300 (422)
. .....+..++++++ +++++...++.|.+|+..+.... ..+..++++++|+++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 2 23356889999976 66666677889999987654432 467899999999977777778899999988765
Q ss_pred eeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCccc
Q 014590 301 SLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCI 380 (422)
Q Consensus 301 ~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~ 380 (422)
.......+...+.+++ ++++|..+++...++.|.+||........ ...
T Consensus 183 ~~~~~~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~------------------------------ 230 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF------------------------------ 230 (270)
T ss_dssp EEECCCSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC------------------------------
T ss_pred eEeecccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCccee-ecc------------------------------
Confidence 4433333336678898 99999877777778899999986443221 110
Q ss_pred ccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEccCCC
Q 014590 381 DRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 381 ~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
.+...+.++++ +++.+++...+++|++++...++
T Consensus 231 -----~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 231 -----TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp -----CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred -----CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 11235788888 57888899999999999987654
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=8.9e-12 Score=112.13 Aligned_cols=228 Identities=12% Similarity=0.090 Sum_probs=157.2
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeee-CCCceeeEEEecCCCeEEEec-C----Ce
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS-LPNAASLVDFDFDESKIVGLI-G----TR 173 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~----~~ 173 (422)
......+.++...+.+++| ++| +++++..++.|.+||.++++...... ....+..++++++++.+++.. + +.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 3456677888888899999 566 66678889999999999887665442 344566799999998887554 4 58
Q ss_pred EEEEECCCCcee--ee-cCCCceeeeEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCCccEEEEEecCC
Q 014590 174 ICIWRRNGLRSV--FP-SREGTFMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED 244 (422)
Q Consensus 174 i~~w~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 244 (422)
|.+||.+++... .. ...+.....+.+.+.+..+++... .+.|..+|..+++..... .+...+..++++|+
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~d 192 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTD 192 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTT
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCC
Confidence 999999877643 22 112223344555555554554443 356777777655543322 23345788999987
Q ss_pred -CEE-EEEcCCCcEEEEeCCC-Cccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 245 -QLI-ISGSSLGSIAISGLSS-DQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 245 -~~l-~s~~~dg~i~iwd~~~-~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
+.+ ++.+.++.|.+||+.+ +... ..+..++++++|+++++...++.|.+||. +++.+..+..
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 544 5556688999999863 3211 25778999999998888878889999998 4666666654
Q ss_pred CCC------ceeeeeeEecCCCEEEEEecCC
Q 014590 308 SPN------VVYSLQHLQNDTSTLVVGGIDG 332 (422)
Q Consensus 308 ~~~------~v~~l~~~s~~~~~l~s~~~dg 332 (422)
+.. .+.+++ |+|+++.|+.++.++
T Consensus 272 ~~~~~g~~~~~~~~~-~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQ-FIPGTNQLIICSNDI 301 (333)
T ss_dssp TTGGGTCSCBCCEEE-ECTTSCEEEEEEECG
T ss_pred CCCccccccCcceEE-ECCCCCEEEEEeCcc
Confidence 432 688898 889988777666654
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=1.4e-12 Score=129.98 Aligned_cols=196 Identities=11% Similarity=-0.013 Sum_probs=136.0
Q ss_pred eeeEEEecCCCeEE-Eec-CC----eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCe-------------
Q 014590 154 ASLVDFDFDESKIV-GLI-GT----RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGT------------- 214 (422)
Q Consensus 154 ~~~~~~~~~~~~l~-~~~-~~----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~------------- 214 (422)
....+|||||+.|+ +.. +| +|++||+.+++.......+......+|++++..|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 34589999999998 433 33 899999999875432222222345788888888888877765
Q ss_pred ---EEEEeCCCccee--eeee--cCCccEEEEEecCC-CEEEEEcC-----CCcEEEEeCCC------Cc--cc------
Q 014590 215 ---ARVFDMYSRKCS--QIIR--MHCAPVTSLSLSED-QLIISGSS-----LGSIAISGLSS------DQ--RL------ 267 (422)
Q Consensus 215 ---i~iwd~~~~~~~--~~~~--~~~~~v~~l~~~~~-~~l~s~~~-----dg~i~iwd~~~------~~--~~------ 267 (422)
|++|++.+++.. ..+. .|...+..+.|+|+ ++++.++. +..|.+||+.+ +. ..
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 999999887632 2222 34556789999987 67766654 57899999976 42 21
Q ss_pred cceEeEEEecCCCEEEEEeCC----CeEEEEECCCCee--eeeeccCCC--ceeeeeeEecCCCEEEEEecCCe--EEEE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTA----GYASCWDLRTMKS--LWETRISPN--VVYSLQHLQNDTSTLVVGGIDGV--LRVL 337 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~--~~~~~~~~~--~v~~l~~~s~~~~~l~s~~~dg~--v~vw 337 (422)
..+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..|.. .+..+. +++++.++++...|+. |.+|
T Consensus 287 ~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~lv~~~~~~g~~~l~~~ 364 (710)
T 2xdw_A 287 EGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVA-CVRSNFLVLCYLHDVKNTLQLH 364 (710)
T ss_dssp SSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE-EETTTEEEEEEEETTEEEEEEE
T ss_pred CcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEE-EEcCCEEEEEEEECCEEEEEEE
Confidence 23333 588999988776653 3699999987642 344545543 677888 7777888888888885 5667
Q ss_pred ECCCCceEEEeeec
Q 014590 338 DQNTGEVLSRCVMD 351 (422)
Q Consensus 338 d~~~~~~~~~~~~~ 351 (422)
|+.+|+.+..+..+
T Consensus 365 ~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 365 DLATGALLKIFPLE 378 (710)
T ss_dssp ETTTCCEEEEECCC
T ss_pred ECCCCCEEEecCCC
Confidence 87678777776554
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=4e-12 Score=112.45 Aligned_cols=193 Identities=13% Similarity=0.085 Sum_probs=133.6
Q ss_pred CceeeEEEecCCC-eEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee
Q 014590 152 NAASLVDFDFDES-KIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 152 ~~~~~~~~~~~~~-~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
.....++|+++++ .++ +..++.|..|+..++...+... ......+++.+++..+++...++.|.+||..+++.....
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHP-SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESS-CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECC-CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 3455699999999 444 6778999999999873333333 333445666666666666666789999999888754433
Q ss_pred ecC----CccEEEEEecCC-CEEEE----Ec-------------CCCcEEEEeCCCCccc------cceEeEEEecCCCE
Q 014590 230 RMH----CAPVTSLSLSED-QLIIS----GS-------------SLGSIAISGLSSDQRL------TGIKTLCYNPCSRL 281 (422)
Q Consensus 230 ~~~----~~~v~~l~~~~~-~~l~s----~~-------------~dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~ 281 (422)
... ...+..++++|+ +++++ |+ ..+.|..++.. ++.. ..+..++|+|+|+.
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNL 185 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCE
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCE
Confidence 221 224567899987 56665 33 13466667665 4332 56789999999999
Q ss_pred EEEEeCCCeEEEEECC-CCee---eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 282 VFAGTTAGYASCWDLR-TMKS---LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 282 l~~g~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+++.+.++.|.+||+. +++. ...+..+...+.+++ ++++|++.++. ++.|.+||.. ++.+..+..
T Consensus 186 lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~-~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~ 254 (296)
T 3e5z_A 186 LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLR-VDAGGLIWASA--GDGVHVLTPD-GDELGRVLT 254 (296)
T ss_dssp EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEE-EBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC
T ss_pred EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEE-ECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC
Confidence 9777788999999986 4544 223333455677888 99999866665 7889999986 777776643
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=1.9e-11 Score=111.38 Aligned_cols=242 Identities=5% Similarity=-0.065 Sum_probs=168.1
Q ss_pred eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCceeeecCC--------Cce
Q 014590 133 VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPSRE--------GTF 193 (422)
Q Consensus 133 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~~~~~~~~--------~~~ 193 (422)
+|.++|..+++.+.++...... .++++||++.++ +. .++.|.++|..+.+.+-.... +..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 8899999999999888876555 899999999998 43 267899999988764422111 122
Q ss_pred eeeEEEeeeCCeEEEecC--CCeEEEEeCCCcceeee-eecCCccEEEEEecCC--CEEEEEcCCCcEEEEeCCCCcccc
Q 014590 194 MKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRLT 268 (422)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~ 268 (422)
...+.++++++.|+++.. ++.|.++| .+++.+.. +... +. +.+.|+ ..+++.+.||.+.++|. +++...
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~ 200 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG 200 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE
Confidence 346788889999887764 57899999 99988877 6432 21 333333 56777888999999999 765541
Q ss_pred ce-------------EeEEEecCCCEEEEEeCCCeEEEEECCCCe--eeeeecc----------CCCceeeeeeEecCCC
Q 014590 269 GI-------------KTLCYNPCSRLVFAGTTAGYASCWDLRTMK--SLWETRI----------SPNVVYSLQHLQNDTS 323 (422)
Q Consensus 269 ~v-------------~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~----------~~~~v~~l~~~s~~~~ 323 (422)
.+ ....+.+++..++..+.++.+.+.|+.+.. .+..+.. .......+. ++|+++
T Consensus 201 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~-~s~d~~ 279 (373)
T 2mad_H 201 AGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA-YLKSSD 279 (373)
T ss_pred EEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE-ECCCCC
Confidence 11 223456666555555578899999987542 2222211 112233466 889999
Q ss_pred EEEEEec----------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEE
Q 014590 324 TLVVGGI----------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITC 393 (422)
Q Consensus 324 ~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 393 (422)
.++.+.. ++.|.++|..+++.+.++... ....+
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-------------------------------------~~p~~ 322 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-------------------------------------HDVDA 322 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-------------------------------------CCcCe
Confidence 8877653 357999999999998888542 23567
Q ss_pred EEe--cCE-EEEEEe-CCCeEEEEEccCCC
Q 014590 394 LAV--GMK-KVVTTH-NSKYIRLWKFNYSD 419 (422)
Q Consensus 394 i~~--~~~-~l~s~s-~Dg~i~iW~~~~~~ 419 (422)
++| |++ +++++. .++.|.++|+.+.+
T Consensus 323 i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 323 ISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 777 566 677776 58999999998765
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.57 E-value=2.7e-13 Score=134.72 Aligned_cols=231 Identities=8% Similarity=-0.030 Sum_probs=157.0
Q ss_pred ccccceeEEEe-cCC-eEE-----EEecCCeEEEEEcCCCeEE-EeeeCCCceeeEEEecCCCeEE-EecCCe-------
Q 014590 110 AHSVGVDQCRM-KRG-LIL-----TGVGDKVMRLWSLEGYKCV-EEYSLPNAASLVDFDFDESKIV-GLIGTR------- 173 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~-----s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~------- 173 (422)
+|...+..++| +|| +|| +|+.+..|++||+.+++.+ ...........++|+|||+.|+ ++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 56667888999 577 666 3444568999999998865 2111111125689999999998 666554
Q ss_pred ------EEEEECCCCc----eeeecCCC-ceeeeEEEeeeCCeEEEecCCC----eEEEEeCCCcceeeeeecCCccEEE
Q 014590 174 ------ICIWRRNGLR----SVFPSREG-TFMKGLCMRYFDPEAVVGCEDG----TARVFDMYSRKCSQIIRMHCAPVTS 238 (422)
Q Consensus 174 ------i~~w~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~v~~ 238 (422)
|++|++.++. .++..... .......+++++..|+.++.++ .|.+||..+++. ..+..+...+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEE
Confidence 9999998876 22222222 2344667788888877776665 777787655543 344445555566
Q ss_pred EEecCCCEEEEEcC----CCcEEEEeCCCCcc-----c------cceEeEEEecCCCEEEEEeCCCeEEEEECC-CCeee
Q 014590 239 LSLSEDQLIISGSS----LGSIAISGLSSDQR-----L------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR-TMKSL 302 (422)
Q Consensus 239 l~~~~~~~l~s~~~----dg~i~iwd~~~~~~-----~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~ 302 (422)
..+++++ ++..+. ++.|.+||+.++.. + ..+..++++ ++.++++...|+..++|.+. +++..
T Consensus 277 ~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 277 VHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp EEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred EEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCee
Confidence 6665556 444443 57899999987652 1 347778887 67788888899988887654 35555
Q ss_pred eeeccC-CCceeeeeeEecCCCEEEE----EecCCeEEEEECCCCce
Q 014590 303 WETRIS-PNVVYSLQHLQNDTSTLVV----GGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 303 ~~~~~~-~~~v~~l~~~s~~~~~l~s----~~~dg~v~vwd~~~~~~ 344 (422)
..+..+ .+.+..+. ++|+++.++. ....++|++||+.+++.
T Consensus 355 ~~l~~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 355 RTVQLPGVGAASNLM-GLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EECCCSSSSEECCCB-SCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEecCCCCeEEEEee-cCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 666655 56788888 8899987763 33458899999988764
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=1e-11 Score=111.97 Aligned_cols=256 Identities=13% Similarity=0.043 Sum_probs=176.5
Q ss_pred cCC-eEEEEec-----CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCc
Q 014590 121 KRG-LILTGVG-----DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLR 183 (422)
Q Consensus 121 ~~~-~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~ 183 (422)
+++ .++.... ++.|.+.|..+++.+.++....... ++++|||+.++ +. .++.|.+||..+.+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 566 4444443 6899999999999999998765555 99999999987 43 25789999999987
Q ss_pred eeeec--CC------CceeeeEEEeeeCCeEEEecC--CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC
Q 014590 184 SVFPS--RE------GTFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (422)
Q Consensus 184 ~~~~~--~~------~~~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~ 252 (422)
.+-.. .. +.....+.+++++..++++.. ++.|.++|+.+++.+.++.... . ...+..+ +.+++.+.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~ 197 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCR 197 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEET
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECC
Confidence 54222 11 223456888899998777753 6899999999999988886422 1 2223223 56777788
Q ss_pred CCcEEEEeCCC-Cccc-----------cceE-eEEEe-cCCCEEEEEeCCCeEEEEECCCCe--eeeeec---------c
Q 014590 253 LGSIAISGLSS-DQRL-----------TGIK-TLCYN-PCSRLVFAGTTAGYASCWDLRTMK--SLWETR---------I 307 (422)
Q Consensus 253 dg~i~iwd~~~-~~~~-----------~~v~-~~~~~-~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~---------~ 307 (422)
||.+.+.++.+ ++.. ..+. ...|. ++|++++ .+.+|.|++.|+.+.. .+..+. +
T Consensus 198 DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 198 DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccccc
Confidence 88888888865 4432 1111 23554 5776555 5558999999997553 332222 0
Q ss_pred -CCCceeeeeeEecCCCEEEEEec----------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCC
Q 014590 308 -SPNVVYSLQHLQNDTSTLVVGGI----------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSA 376 (422)
Q Consensus 308 -~~~~v~~l~~~s~~~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~ 376 (422)
..+....++ ++++++.++.... .+.|.+.|+.+++.+..+...
T Consensus 277 ~~p~g~q~~a-~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg------------------------- 330 (386)
T 3sjl_D 277 WRPGGWQQVA-YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG------------------------- 330 (386)
T ss_dssp EEECSSSCEE-EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------------------------
T ss_pred ccCCCcceee-ECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-------------------------
Confidence 112334566 7899998877643 257999999999999988652
Q ss_pred CcccccCCCCCCCCeEEEEe--cCE-EEEE-EeCCCeEEEEEccCCC
Q 014590 377 GCCIDRIPKTIRPPITCLAV--GMK-KVVT-THNSKYIRLWKFNYSD 419 (422)
Q Consensus 377 ~~~~~~~~~~h~~~v~~i~~--~~~-~l~s-~s~Dg~i~iW~~~~~~ 419 (422)
..+.++++ |++ +|++ ...++.|.++|..+++
T Consensus 331 ------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 331 ------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp ------------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ------------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 24667777 554 5555 4568999999988764
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=2e-12 Score=128.46 Aligned_cols=207 Identities=10% Similarity=-0.078 Sum_probs=137.0
Q ss_pred eeeEEEecCCCeEE-E-ec----CCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCCCe------------
Q 014590 154 ASLVDFDFDESKIV-G-LI----GTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGT------------ 214 (422)
Q Consensus 154 ~~~~~~~~~~~~l~-~-~~----~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~------------ 214 (422)
....+|||||+.|+ + +. +.+|++||+.+++.+ .....+......+|++++..|+.++.+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 44589999999998 2 22 257999999998754 22122211146788888988888888766
Q ss_pred -EEEEeCCCcc----eeeeeecCCccEEEEEecCC-CEEEEEcCCC----cEEEEeCCCCccc------cceEeEEEecC
Q 014590 215 -ARVFDMYSRK----CSQIIRMHCAPVTSLSLSED-QLIISGSSLG----SIAISGLSSDQRL------TGIKTLCYNPC 278 (422)
Q Consensus 215 -i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg----~i~iwd~~~~~~~------~~v~~~~~~~~ 278 (422)
|++|++.+++ .+.....|...+..+.++|+ ++++.++.++ .|.++|..++... ..+....+ ++
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~ 281 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WK 281 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ET
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cC
Confidence 9999998876 23333345567889999987 6777666555 6778876555433 34455555 56
Q ss_pred CCEEEEEeC----CCeEEEEECCCCee--eeeeccC--CCceeeeeeEecCCCEEEEEecCCeEEEEECC-CCceEEEee
Q 014590 279 SRLVFAGTT----AGYASCWDLRTMKS--LWETRIS--PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN-TGEVLSRCV 349 (422)
Q Consensus 279 ~~~l~~g~~----dg~i~iwd~~~~~~--~~~~~~~--~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~-~~~~~~~~~ 349 (422)
|. ++..+. ++.|.+||+.+++. ...+..+ ...+..++ ++ ++.++++...|+..++|.+. +++....+.
T Consensus 282 g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~-~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 358 (695)
T 2bkl_A 282 DR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS-IV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQ 358 (695)
T ss_dssp TE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE-EE-TTEEEEEEEETTEEEEEEEETTCCEEEECC
T ss_pred Cc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE-EE-CCEEEEEEEECCEEEEEEEeCCCCeeEEec
Confidence 66 554443 58899999987653 2333333 45677888 66 67788899999988888654 466566655
Q ss_pred ec-CCcccccCCCCCC
Q 014590 350 MD-IGSASSSSNKVSG 364 (422)
Q Consensus 350 ~~-~~~~~~~~~s~d~ 364 (422)
.+ ...+..+++++|+
T Consensus 359 ~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 359 LPGVGAASNLMGLEDL 374 (695)
T ss_dssp CSSSSEECCCBSCTTC
T ss_pred CCCCeEEEEeecCCCC
Confidence 44 3333444444444
No 196
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.55 E-value=1e-11 Score=113.80 Aligned_cols=222 Identities=11% Similarity=0.131 Sum_probs=153.0
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCC---------ceeeEEEecCCCeE-EEecCCeEEEEECCCCceeeec
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN---------AASLVDFDFDESKI-VGLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l-~~~~~~~i~~w~~~~~~~~~~~ 188 (422)
...++.++.++.++.|..+|.++|+.+..+.... .........++..+ +++.++.|..+|.++++.++..
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 3457788888889999999999999988777632 11222223344444 4888999999999988866443
Q ss_pred CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccE-----EEEEecCCCEEEEEcCCCcEEEEeCCC
Q 014590 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV-----TSLSLSEDQLIISGSSLGSIAISGLSS 263 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~l~~~~~~~l~s~~~dg~i~iwd~~~ 263 (422)
....... ......+..++.++.++.|..+|..+|+.+..+....... ..... .++.++.++.++.+..+|..+
T Consensus 130 ~~~~~~~-~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 130 KVAGEAL-SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp ECSSCCC-SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCTTTEEEEEETTT
T ss_pred eCCCceE-cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcCCCEEEEEECCC
Confidence 3221111 1112235568889999999999999999888776432211 11122 146788888899999999999
Q ss_pred Cccc-----cc------------e-EeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEE
Q 014590 264 DQRL-----TG------------I-KTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 264 ~~~~-----~~------------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l 325 (422)
++.+ .. + ..... .+..+++++.++.+..+|..+++.++..... ....+. . ++..+
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~-~--~~~~l 280 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDFI-V--DGNRI 280 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEEE-E--ETTEE
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCce-E--ECCEE
Confidence 8876 10 1 11111 3567888888999999999999988776532 234444 3 46678
Q ss_pred EEEecCCeEEEEECCCCceEEEee
Q 014590 326 VVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+.++.++.|..+|..+|+.+....
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEEC
T ss_pred EEEcCCCeEEEEECCCCcEEEeec
Confidence 888889999999999999877654
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=5.7e-11 Score=108.28 Aligned_cols=236 Identities=12% Similarity=0.058 Sum_probs=161.8
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEe----------cCCeEEEEEcCCCeEEEeeeCC--------CceeeEEEecCC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP--------NAASLVDFDFDE 163 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~ 163 (422)
.+.++..-..+ .+++ +|| +++.+. .++.|.+||..+++.+..+... .....++++|||
T Consensus 59 ~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG 136 (373)
T 2mad_H 59 ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN 136 (373)
T ss_pred EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC
Confidence 44555543333 7788 567 666654 3678999999999888887654 223468999999
Q ss_pred CeEE-Eec--CCeEEEEECCCCceeee-cCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeee-----cCC
Q 014590 164 SKIV-GLI--GTRICIWRRNGLRSVFP-SREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIR-----MHC 233 (422)
Q Consensus 164 ~~l~-~~~--~~~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~-----~~~ 233 (422)
++|+ +.. ++.|.++| .+++.+.. ...+. ...+.+.++. +++.+.||.+.++|. +++...... ...
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAA 211 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCC
Confidence 9998 543 57899999 88875533 32222 1233344433 677778999999999 887663322 111
Q ss_pred ccE-EEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC-----
Q 014590 234 APV-TSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT----- 287 (422)
Q Consensus 234 ~~v-~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~----- 287 (422)
.++ ....+.++ ..++..+.++.+.+.|+..+... .....++++|+++.++++..
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~ 291 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAW 291 (373)
T ss_pred cceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcc
Confidence 221 22334433 33333346788998888654211 22334788999998888653
Q ss_pred -----CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEEe-cCCeEEEEECCCCceEEEe
Q 014590 288 -----AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVGG-IDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 288 -----dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~ 348 (422)
++.|.++|+.+++.+.++... ....+++ ++|||+ +++++. .++.|.++|+.+++.+..+
T Consensus 292 ~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~-~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 292 KLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAIS-VAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred cccCCCCeEEEEECCCCEEEEEEECC-CCcCeEE-ECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 357999999999998888643 3578998 999999 788877 5899999999999998884
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=1.1e-11 Score=111.62 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=166.7
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEe----------cCCeEEEEEcCCCeEEEeeeCCC--------ceeeEEEecCC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLPN--------AASLVDFDFDE 163 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~ 163 (422)
.+.++..-..+ . +++ +|| +++.++ .++.|.+||..+++.+.++..+. ....++++|||
T Consensus 71 v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG 148 (386)
T 3sjl_D 71 VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG 148 (386)
T ss_dssp EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS
T ss_pred EEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC
Confidence 34445443444 3 777 577 555554 36789999999999999886542 34569999999
Q ss_pred CeEE-Eec--CCeEEEEECCCCceeeecCCCceeeeEEEeee-CCeEEEecCCCeEEEEeCCC-cceeeeeecC----Cc
Q 014590 164 SKIV-GLI--GTRICIWRRNGLRSVFPSREGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYS-RKCSQIIRMH----CA 234 (422)
Q Consensus 164 ~~l~-~~~--~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~----~~ 234 (422)
++++ +.. ++.|.++|+.+.+.+-....... ..+.+. ...+++.+.||.+.+.++.+ ++.......+ ..
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~ 225 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 225 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTS
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccc
Confidence 9988 443 68999999999886533322111 122233 33477888899999999876 5543221111 12
Q ss_pred cEE-EEEec-CCCEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC------
Q 014590 235 PVT-SLSLS-EDQLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT------ 287 (422)
Q Consensus 235 ~v~-~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~------ 287 (422)
++. ...|. +++.++..+.+|.+.+.|+.++... .....++++|+++.+++...
T Consensus 226 ~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 226 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp CBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC
T ss_pred cccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc
Confidence 221 23454 5555555677899999999765421 24456888999998888753
Q ss_pred ----CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEE-ecCCeEEEEECCCCceEEEeeec
Q 014590 288 ----AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVG-GIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 288 ----dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~-~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
.+.|.++|+.+++.+.++... ..+++++ +++|++ +|++. ..++.|.++|..+++.+.++...
T Consensus 306 hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~la-vs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 306 HKTASRFVVVLDAKTGERLAKFEMG-HEIDSIN-VSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEE-EEECEEE-ECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCCEEEEEECCCCeEEEEEECC-CCcceEE-ECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 257999999999999887654 3678999 999997 66664 45899999999999999988653
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=3.7e-10 Score=99.61 Aligned_cols=231 Identities=7% Similarity=-0.042 Sum_probs=156.2
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCC---CceeeEEEecCCCeEEEec-CCeEEEEECC
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP---NAASLVDFDFDESKIVGLI-GTRICIWRRN 180 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-~~~i~~w~~~ 180 (422)
.+......+.++++ ++| ..++...++.|.+||.. ++... +..+ .....+++.+++...++.. ++.|..+|..
T Consensus 14 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 14 NLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 34456678889998 566 55555568999999988 55443 3222 3455688889998777554 6889999988
Q ss_pred CCceeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 181 GLRSVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 181 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
.....+... .......+++...+...++...++.|..+|.. ++.... +......+..+++.++ ++.++...++.|.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 333222222 22333445555455556666667899999987 654422 2323456889999876 6555656678899
Q ss_pred EEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee-eeccCCCceeeeeeEecCCCEEEEE
Q 014590 258 ISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW-ETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 258 iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
.+|. +++.. ..+..++++++|++.++....+.|.+||. +++... .+..+...+.+++ ++++|+..++.
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~d~~g~l~v~~ 247 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAIT-AGKNSEIWFTE 247 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECSTTCEEEEE
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEE-ECCCCCEEEec
Confidence 9998 54432 46889999999987777777788999998 444332 2333446688898 99999877776
Q ss_pred ecCCeEEEEECCCCce
Q 014590 329 GIDGVLRVLDQNTGEV 344 (422)
Q Consensus 329 ~~dg~v~vwd~~~~~~ 344 (422)
..++.|..||. +++.
T Consensus 248 ~~~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 248 WGANQIGRITN-DNTI 262 (300)
T ss_dssp TTTTEEEEECT-TSCE
T ss_pred cCCCeEEEECC-CCcE
Confidence 67789999998 4543
No 200
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.51 E-value=1.2e-11 Score=121.57 Aligned_cols=262 Identities=11% Similarity=0.101 Sum_probs=174.6
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce----------eeEEEecCCCeEE-EecCCeEEEEECCCCceeeec
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA----------SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~ 188 (422)
..++.++.++.++.|.-+|..+|+.+..+...... ..-....++..++ ++.++.+..+|..+++.+...
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 35778888888999999999999999888764321 1111122344554 888999999999999876543
Q ss_pred CCC------ceeeeEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCCcc---------------------
Q 014590 189 REG------TFMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAP--------------------- 235 (422)
Q Consensus 189 ~~~------~~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~--------------------- 235 (422)
... ..... .....+..+++++. ++.|+.+|..+|+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~-~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITG-APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCccccc-CcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 322 11111 11123455666654 799999999999988877532211
Q ss_pred -----------EEEEEecCC-CEEEEEcCCC-------------------cEEEEeCCCCccc----------------c
Q 014590 236 -----------VTSLSLSED-QLIISGSSLG-------------------SIAISGLSSDQRL----------------T 268 (422)
Q Consensus 236 -----------v~~l~~~~~-~~l~s~~~dg-------------------~i~iwd~~~~~~~----------------~ 268 (422)
...++++|+ +.++.++.++ .|..+|..+|+.+ .
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 124567765 7787777654 4999999999876 1
Q ss_pred ceEeEEEecCC---CEEEEEeCCCeEEEEECCCCeeeeeeccCC-----------Cce----------------------
Q 014590 269 GIKTLCYNPCS---RLVFAGTTAGYASCWDLRTMKSLWETRISP-----------NVV---------------------- 312 (422)
Q Consensus 269 ~v~~~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----------~~v---------------------- 312 (422)
....+....+| ..++.++.+|.++++|..+|+.+..+.... ..+
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~ 393 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH 393 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc
Confidence 12223333467 688999999999999999999887654221 001
Q ss_pred --eeeeeEecCCCEEEEEecC-------------------------------------------CeEEEEECCCCceEEE
Q 014590 313 --YSLQHLQNDTSTLVVGGID-------------------------------------------GVLRVLDQNTGEVLSR 347 (422)
Q Consensus 313 --~~l~~~s~~~~~l~s~~~d-------------------------------------------g~v~vwd~~~~~~~~~ 347 (422)
..++ ++|++.++++...+ |.|..||+.+++.+..
T Consensus 394 ~w~~~a-~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 394 NWHPMS-FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp CSSCCE-EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred CCCCce-EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 1456 88988888876543 5677777777776666
Q ss_pred eeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeE--EEEecCEEEEEEeCCCeEEEEEccCCCC
Q 014590 348 CVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPIT--CLAVGMKKVVTTHNSKYIRLWKFNYSDK 420 (422)
Q Consensus 348 ~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~--~i~~~~~~l~s~s~Dg~i~iW~~~~~~~ 420 (422)
+.... ++. .+..++.+++.++.||.+++||..+++.
T Consensus 473 ~~~~~-------------------------------------~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 473 VEHVS-------------------------------------PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEESS-------------------------------------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cCCCC-------------------------------------CCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 54321 111 2334666788889999999999988763
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=2.6e-11 Score=108.04 Aligned_cols=232 Identities=9% Similarity=0.034 Sum_probs=156.9
Q ss_pred EEeeccccceeEEEe-cCC-eEEE-------EecCCeEEEEEcCCCeEEEeee-----CCCceeeEEEecC-CCeEEEec
Q 014590 106 DQWKAHSVGVDQCRM-KRG-LILT-------GVGDKVMRLWSLEGYKCVEEYS-----LPNAASLVDFDFD-ESKIVGLI 170 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~-~~~-~l~s-------~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~l~~~~ 170 (422)
..+.+......+++| +++ ++++ +..++.|.+||..+++...... .......++++++ ++.+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp EEEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred hhhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 345555667788889 466 5555 4678999999988877643322 1134556889998 76666776
Q ss_pred CCeEEEEECCCCcee-e-ec-CC---CceeeeEEEeeeCCeEEEecCC---------------CeEEEEeCCCcceeeee
Q 014590 171 GTRICIWRRNGLRSV-F-PS-RE---GTFMKGLCMRYFDPEAVVGCED---------------GTARVFDMYSRKCSQII 229 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~-~-~~-~~---~~~~~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~~ 229 (422)
.+.|.+||.+ ++.. + .. .. ......+++...+...++...+ +.|..+|.. ++.....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 6789999988 5432 2 11 11 1223345555555555555444 577788875 5543332
Q ss_pred ecCCccEEEEEec----CCC-EE-EEEcCCCcEEEEeCC-CCcc-----c--------cceEeEEEecCCCEEEEEeCCC
Q 014590 230 RMHCAPVTSLSLS----EDQ-LI-ISGSSLGSIAISGLS-SDQR-----L--------TGIKTLCYNPCSRLVFAGTTAG 289 (422)
Q Consensus 230 ~~~~~~v~~l~~~----~~~-~l-~s~~~dg~i~iwd~~-~~~~-----~--------~~v~~~~~~~~~~~l~~g~~dg 289 (422)
.+......++++ |++ .+ ++...++.|.+||+. +++. . ..+..++++++|+++++...++
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred -cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 233456788998 873 44 444678899999976 3431 1 2377899999999888887888
Q ss_pred eEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEE-EEecCCeEEEEECCC
Q 014590 290 YASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLV-VGGIDGVLRVLDQNT 341 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~-s~~~dg~v~vwd~~~ 341 (422)
.|.+||..+++.+..+..+...+.+++ ++++++.|+ +...++.|..|++..
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~-~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLH-FKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEE-ECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEE-ECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999999987777777776767889999 899999554 455668899999864
No 202
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=1.6e-11 Score=111.15 Aligned_cols=218 Identities=11% Similarity=0.048 Sum_probs=143.3
Q ss_pred cceeEEEe-cCC-eEEEEecC---C--eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec--------------
Q 014590 113 VGVDQCRM-KRG-LILTGVGD---K--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI-------------- 170 (422)
Q Consensus 113 ~~v~~v~~-~~~-~l~s~~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-------------- 170 (422)
..+..+.| ||| +|+.++.+ + .|.+||+.+++.......+. +..++|+|||+.|+ ++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 45777888 577 77776654 3 47888998888776665555 66799999999988 442
Q ss_pred -------------CCeEEEEECCCCce-e-eecCCCceeeeEEEeeeCCeEEEecCCC-------eEEEEeCCCcceeee
Q 014590 171 -------------GTRICIWRRNGLRS-V-FPSREGTFMKGLCMRYFDPEAVVGCEDG-------TARVFDMYSRKCSQI 228 (422)
Q Consensus 171 -------------~~~i~~w~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~ 228 (422)
...|.+||+.+++. . +.. . ......+++++ .++++..++ ...+|.+.+++.. .
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-K 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-E
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-E
Confidence 25789999988765 2 222 2 33456677777 666664431 3344433355543 3
Q ss_pred eecCCccEEEEEecCC-CEEEEEcCC--------CcEEEEeCCCCccc-------cceEe-EEEecCCCEEEEEeCCCeE
Q 014590 229 IRMHCAPVTSLSLSED-QLIISGSSL--------GSIAISGLSSDQRL-------TGIKT-LCYNPCSRLVFAGTTAGYA 291 (422)
Q Consensus 229 ~~~~~~~v~~l~~~~~-~~l~s~~~d--------g~i~iwd~~~~~~~-------~~v~~-~~~~~~~~~l~~g~~dg~i 291 (422)
+..+ ..+..+ +|+ +.++.++.+ ..|.+|| +++.. ..+.. +.|+ ++ ++++++.++.+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 3334 555555 666 666666543 4688888 44432 45665 8899 88 88999999999
Q ss_pred EEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeE-EEEECCCCceEEEeee
Q 014590 292 SCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVL-RVLDQNTGEVLSRCVM 350 (422)
Q Consensus 292 ~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v-~vwd~~~~~~~~~~~~ 350 (422)
++| +.+++.. .+..+...|.+++ ++| ..+++++.++.. .+|.+. ++ ...+..
T Consensus 286 ~l~-~~~g~~~-~~~~~~~~v~~~~-~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~ 338 (347)
T 2gop_A 286 NLY-IWDGEIK-PIAKGRHWIMGFD-VDE--IVVYLKETATRLRELFTWD-GE-EKQLTD 338 (347)
T ss_dssp EEE-EESSSEE-EEECSSSEEEEEE-ESS--SEEEEEECSSSCCEEEEES-SS-EEECCC
T ss_pred EEE-EcCCceE-EEecCCCeEEeee-eeC--cEEEEEcCCCChHHheEeC-Cc-EEEecc
Confidence 999 8766553 3444577899998 888 677777776654 677665 54 344443
No 203
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.48 E-value=2.6e-11 Score=119.56 Aligned_cols=184 Identities=13% Similarity=0.108 Sum_probs=122.6
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCcee----------eEEEecCCCeEE-EecCCeEEEEECCCCceeeec
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS----------LVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~~~~ 188 (422)
..++.++.++.++.|..+|..+|+.+..+....... .-....++..++ ++.++.+..+|.++++.+...
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 357788888889999999999999999887543210 011122344444 888999999999999876443
Q ss_pred CCC------ceeeeEEEeeeCCeEEEec------CCCeEEEEeCCCcceeeeeecCC-----------------------
Q 014590 189 REG------TFMKGLCMRYFDPEAVVGC------EDGTARVFDMYSRKCSQIIRMHC----------------------- 233 (422)
Q Consensus 189 ~~~------~~~~~~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~----------------------- 233 (422)
... ......- ...+..+++++ .++.|..||..+|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP-~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAP-RVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCC-EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCc-EEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 322 0110001 11244455554 37899999999999887765210
Q ss_pred --------ccEEEEEecCC-CEEEEEcCCCc-------------------EEEEeCCCCccc-------c---------c
Q 014590 234 --------APVTSLSLSED-QLIISGSSLGS-------------------IAISGLSSDQRL-------T---------G 269 (422)
Q Consensus 234 --------~~v~~l~~~~~-~~l~s~~~dg~-------------------i~iwd~~~~~~~-------~---------~ 269 (422)
.....++++|+ +.++.++.++. |..+|..+|+.+ . .
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 00124667765 78888887763 999999999877 0 1
Q ss_pred eEeEEEecCCC---EEEEEeCCCeEEEEECCCCeeeee
Q 014590 270 IKTLCYNPCSR---LVFAGTTAGYASCWDLRTMKSLWE 304 (422)
Q Consensus 270 v~~~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~ 304 (422)
+.......+|+ .++.++.+|.++++|..+|+.+..
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 11122223564 788999999999999999998743
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=1.1e-10 Score=107.99 Aligned_cols=224 Identities=8% Similarity=-0.020 Sum_probs=155.1
Q ss_pred cceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCC--eEEEEECCCCcee--
Q 014590 113 VGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGT--RICIWRRNGLRSV-- 185 (422)
Q Consensus 113 ~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~--~i~~w~~~~~~~~-- 185 (422)
.....+++ +++ ++++...++.|++||.++++............ ++++++++.|+ +..++ .|.+++..+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 45778888 566 56666667899999999888776665544445 99999999887 55544 7888988765432
Q ss_pred ee---cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee----eecCCccE--EEEEecC-C-CEEEEEcCCC
Q 014590 186 FP---SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI----IRMHCAPV--TSLSLSE-D-QLIISGSSLG 254 (422)
Q Consensus 186 ~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v--~~l~~~~-~-~~l~s~~~dg 254 (422)
.. .........+++.+.+..|+.+..++.|+.||..++..... ..++...- ..++++| + .++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 20 11223334566666555666677788999999987753322 22222222 3899998 4 4555666788
Q ss_pred cEEEEeCCCCccc--------------------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccC-----
Q 014590 255 SIAISGLSSDQRL--------------------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRIS----- 308 (422)
Q Consensus 255 ~i~iwd~~~~~~~--------------------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~----- 308 (422)
.|+.|+....... .....++++|+|+++++-. .++.|+.||+.+++.. ++.++
T Consensus 290 ~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g 368 (409)
T 3hrp_A 290 SVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVAS 368 (409)
T ss_dssp EEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBS
T ss_pred EEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCC
Confidence 9999987542111 3478999999999777777 8899999998777643 34333
Q ss_pred ----------CCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 309 ----------PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 309 ----------~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
-.....++ +++++.++++-..++.|+.+++
T Consensus 369 ~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEE
T ss_pred cCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEe
Confidence 13577888 9999888888888888888765
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=1.4e-10 Score=111.14 Aligned_cols=235 Identities=15% Similarity=0.143 Sum_probs=162.6
Q ss_pred ceeEEEe-cCC-eEEEEecCCeEEEEEcC--CCeEEEeeeCCCceeeEEEe----cCCCeEE--EecCCeEEEEECCCCc
Q 014590 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNAASLVDFD----FDESKIV--GLIGTRICIWRRNGLR 183 (422)
Q Consensus 114 ~v~~v~~-~~~-~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~----~~~~~l~--~~~~~~i~~w~~~~~~ 183 (422)
.+..+.| +|| ++++++.|+.|.+||+. +++.+.++........++|+ |||++++ ...++++.++|..+.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 4557778 577 88889999999999995 88888888887777789999 6999887 4557999999987765
Q ss_pred eeee--cC----C------C--------------------------------------------ceeeeEEEeeeCCeE-
Q 014590 184 SVFP--SR----E------G--------------------------------------------TFMKGLCMRYFDPEA- 206 (422)
Q Consensus 184 ~~~~--~~----~------~--------------------------------------------~~~~~~~~~~~~~~l- 206 (422)
.+.. .. . . .......+.+++.++
T Consensus 278 ~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~ 357 (567)
T 1qks_A 278 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFI 357 (567)
T ss_dssp EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEE
T ss_pred EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEE
Confidence 3311 00 0 0 001122344455654
Q ss_pred EEecCCCeEEEEeCCCcceeeeeec-----CCccEEEEEecCC-CEE-EEEc-CCCcEEEEeCCCCc-------cc----
Q 014590 207 VVGCEDGTARVFDMYSRKCSQIIRM-----HCAPVTSLSLSED-QLI-ISGS-SLGSIAISGLSSDQ-------RL---- 267 (422)
Q Consensus 207 ~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~~-~~l-~s~~-~dg~i~iwd~~~~~-------~~---- 267 (422)
++...++.|.++|+.+++.+..+.. |.+.-..+ ++|+ ..+ +++. .++.|.++|..++. .+
T Consensus 358 va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 358 TAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe
Confidence 4455678999999999987766653 33222222 4575 444 4443 56899999988732 22
Q ss_pred ---cceEeEEEecCCCEEEEEeC-------CCeEEEEECCCC-----eee-eeec--------cCCCceeeeeeEecCCC
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTT-------AGYASCWDLRTM-----KSL-WETR--------ISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~-------dg~i~iwd~~~~-----~~~-~~~~--------~~~~~v~~l~~~s~~~~ 323 (422)
..-..+..+|+++++.+... .+.|.++|+.+. ... ..+. .....+..+. |+++|+
T Consensus 437 ~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~ 515 (567)
T 1qks_A 437 ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE-FNKDGT 515 (567)
T ss_dssp CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE-ECTTSS
T ss_pred cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee-ECCCCC
Confidence 22244778999999998773 358999999876 211 2221 1235688898 999999
Q ss_pred EEEEEec-----CCeEEEEECCCCceEEEeee
Q 014590 324 TLVVGGI-----DGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 324 ~l~s~~~-----dg~v~vwd~~~~~~~~~~~~ 350 (422)
.+..+.. ++.|.|+|.++++.+..+..
T Consensus 516 ~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 516 EVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred EEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 8776643 79999999999999888864
No 206
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.47 E-value=8.5e-11 Score=115.66 Aligned_cols=232 Identities=15% Similarity=0.118 Sum_probs=163.7
Q ss_pred EEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCC-C-----ceeeEEEecCCCeEEEec------CCeEEEEECCCCcee
Q 014590 118 CRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-N-----AASLVDFDFDESKIVGLI------GTRICIWRRNGLRSV 185 (422)
Q Consensus 118 v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~l~~~~------~~~i~~w~~~~~~~~ 185 (422)
+++.++.++.++.|+.+..+|..+|+.+..+... . .........++..++++. ++.|..+|..+++.+
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 4445678888999999999999999999888765 2 111111122444445443 689999999998876
Q ss_pred eecCCCcee---------------------------------eeEEEeeeCCeEEEecCCC-------------------
Q 014590 186 FPSREGTFM---------------------------------KGLCMRYFDPEAVVGCEDG------------------- 213 (422)
Q Consensus 186 ~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~~d~------------------- 213 (422)
......... ...++.+....++.++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 433221100 1234444566677776654
Q ss_pred eEEEEeCCCcceeeeeec--CC--------ccEEEEEec-CC---CEEEEEcCCCcEEEEeCCCCccc-----cce----
Q 014590 214 TARVFDMYSRKCSQIIRM--HC--------APVTSLSLS-ED---QLIISGSSLGSIAISGLSSDQRL-----TGI---- 270 (422)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~--~~--------~~v~~l~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~v---- 270 (422)
.|..+|..+|+.+..++. |. .++ .+... .+ ..++.++.+|.++++|..+|+.+ ..+
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~-l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI-LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE-EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcE-EEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 599999999999888764 21 122 12221 23 57889999999999999999886 111
Q ss_pred ---------------------------------EeEEEecCCCEEEEEeCC-----------------------------
Q 014590 271 ---------------------------------KTLCYNPCSRLVFAGTTA----------------------------- 288 (422)
Q Consensus 271 ---------------------------------~~~~~~~~~~~l~~g~~d----------------------------- 288 (422)
..++++|++.++++...+
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 146889998888876432
Q ss_pred --------------CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 289 --------------GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 289 --------------g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
|.|..||+.+++.++++... ..+.+.. +...+..++.++.||.+++||..+|+.+..+....
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~-~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGT-LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCE-EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcc-eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 78999999999999887643 3445555 66778889999999999999999999999987654
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.46 E-value=1.1e-10 Score=103.91 Aligned_cols=227 Identities=13% Similarity=0.030 Sum_probs=150.6
Q ss_pred ceeeEEEecCCCeEEE--------ecCCeEEEEECCCCceeeecC-----CCceeeeEEEeeeCCeEEEecCCCeEEEEe
Q 014590 153 AASLVDFDFDESKIVG--------LIGTRICIWRRNGLRSVFPSR-----EGTFMKGLCMRYFDPEAVVGCEDGTARVFD 219 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~--------~~~~~i~~w~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 219 (422)
....++|++++..+++ ..++.|..||..+++...... .......+++...+..++.+...+.|.+||
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d 98 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence 4456888888887777 568899999987766432111 111222344444423455555555899999
Q ss_pred CCCcceeee-eec----CCccEEEEEecCC-CEEEEEcCC---------------CcEEEEeCCCCccc------cceEe
Q 014590 220 MYSRKCSQI-IRM----HCAPVTSLSLSED-QLIISGSSL---------------GSIAISGLSSDQRL------TGIKT 272 (422)
Q Consensus 220 ~~~~~~~~~-~~~----~~~~v~~l~~~~~-~~l~s~~~d---------------g~i~iwd~~~~~~~------~~v~~ 272 (422)
.. ++.... ... ....+.+++++++ ++.++...+ +.|..+|.. ++.. .....
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNG 176 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEE
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcce
Confidence 87 765433 221 1235789999977 555555444 567778765 4432 45788
Q ss_pred EEEe----cCCCEEEEE-eCCCeEEEEECC-CCe-----eeeeeccCC-CceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 273 LCYN----PCSRLVFAG-TTAGYASCWDLR-TMK-----SLWETRISP-NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 273 ~~~~----~~~~~l~~g-~~dg~i~iwd~~-~~~-----~~~~~~~~~-~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++++ |+++.++++ ..++.|.+||.. +++ ....+..+. ..+..++ ++++|+++++...++.|.+||..
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~-~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD-FDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE-EBTTCCEEEEEETTTEEEEECTT
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE-ECCCCCEEEEEcCCCEEEEEcCC
Confidence 9999 999766555 567899999976 443 223344443 5678888 99999988888788899999988
Q ss_pred CCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCE-EEEEEeCCCeEEEEEccC
Q 014590 341 TGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMK-KVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~-~l~s~s~Dg~i~iW~~~~ 417 (422)
+++.+..+..+ ...+.+++| +++ ++++...++.|..|++..
T Consensus 256 ~g~~~~~~~~~------------------------------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 256 GGQPKMRIRCP------------------------------------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CBSCSEEEECS------------------------------------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCcEeEEEeCC------------------------------------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 77766555332 236788888 566 556666778999999875
Q ss_pred C
Q 014590 418 S 418 (422)
Q Consensus 418 ~ 418 (422)
.
T Consensus 300 ~ 300 (314)
T 1pjx_A 300 N 300 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=8.7e-11 Score=107.79 Aligned_cols=245 Identities=9% Similarity=0.005 Sum_probs=172.1
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCceeeecCC--------Cc
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPSRE--------GT 192 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~~~~~~~~--------~~ 192 (422)
+.|.+.|..+++.+.++...... -++++||++.++ +. .++.|.++|..+.+.+-...- +.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 79999999999999999876666 899999999987 43 367899999999875422211 22
Q ss_pred eeeeEEEeeeCCeEEEecC--CCeEEEEeCCCcceeeeeecCCccEEEEEecC--CCEEEEEcCCCcEEEEeCCCCccc-
Q 014590 193 FMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE--DQLIISGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~dg~i~iwd~~~~~~~- 267 (422)
....+.++++++.++++.. ++.|.+.|+.+++.+..+..... ....| ...+++.+.||.+.+.+..+++..
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~ 253 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKV 253 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEE
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEE
Confidence 3346788888988887764 68999999999998888764221 12222 256666677788777777444321
Q ss_pred ----------cc-eEeEEEecCCCEEEEEeCCCeEEEEECCCCeee--eeecc----------CCCceeeeeeEecCCCE
Q 014590 268 ----------TG-IKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL--WETRI----------SPNVVYSLQHLQNDTST 324 (422)
Q Consensus 268 ----------~~-v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~----------~~~~v~~l~~~s~~~~~ 324 (422)
.+ ...+.+.+++..++..+..+.|.+.|....... ..+.. .......++ ++|++++
T Consensus 254 ~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va-~s~dg~r 332 (426)
T 3c75_H 254 TNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTA-YHRQSDR 332 (426)
T ss_dssp EECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEE-EEGGGTE
T ss_pred EeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeE-EcCCCCE
Confidence 11 123567889988888888899999998654321 11110 011122366 8899987
Q ss_pred EEEEec----------CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEE
Q 014590 325 LVVGGI----------DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCL 394 (422)
Q Consensus 325 l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i 394 (422)
+++... ++.|.++|..+.+.+.++.... ...++
T Consensus 333 lyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-------------------------------------~P~gi 375 (426)
T 3c75_H 333 IYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-------------------------------------EIDSI 375 (426)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------------------------------------EECEE
T ss_pred EEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-------------------------------------CcCeE
Confidence 777643 3579999999999999886521 35667
Q ss_pred Ee--cCE-EEEEEe-CCCeEEEEEccCCC
Q 014590 395 AV--GMK-KVVTTH-NSKYIRLWKFNYSD 419 (422)
Q Consensus 395 ~~--~~~-~l~s~s-~Dg~i~iW~~~~~~ 419 (422)
+| |++ +++++. .++.|.++|+.+.+
T Consensus 376 a~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 376 NVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 77 566 777777 69999999988764
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=5.5e-12 Score=114.15 Aligned_cols=166 Identities=11% Similarity=0.098 Sum_probs=128.5
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCc-----------e-eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeC
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLR-----------S-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM 220 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 220 (422)
....+++++....++++....+.+|+++... . ......+ +..+++ ++..|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~--V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD--VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT--EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC--eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 4567999999999996666678889865332 1 1222333 444555 77778888 8899999999
Q ss_pred CCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc---cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 221 YSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL---TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 221 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
.+.........|..++.++.+.+.+ +++++.||.+.+||+.++... ..|++++|+|+| ++.|..||++++|+..
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred hhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCccccccCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence 8777666667778888888876544 888899999999999877655 889999999999 7889999999999988
Q ss_pred CCee--eeee------c---cCCCceeeeeeEecCCCEEEE
Q 014590 298 TMKS--LWET------R---ISPNVVYSLQHLQNDTSTLVV 327 (422)
Q Consensus 298 ~~~~--~~~~------~---~~~~~v~~l~~~s~~~~~l~s 327 (422)
.++. ..++ . +|...|.++. |.+++.++++
T Consensus 191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~-wl~~~~flv~ 230 (388)
T 1xip_A 191 NGEMEKQFEFSLPSELEELPVEEYSPLSVT-ILSPQDFLAV 230 (388)
T ss_dssp TTEEEEEEEECCCHHHHTSCTTTSEEEEEE-ESSSSEEEEE
T ss_pred CccccccceecCCcccccccCCCeeEEEEE-EecCCeEEEE
Confidence 7664 4455 2 3678899999 8888888876
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=1e-10 Score=107.30 Aligned_cols=238 Identities=11% Similarity=0.102 Sum_probs=163.5
Q ss_pred eeEEeeccccceeEEEe-cCC-eEEEEe----------cCCeEEEEEcCCCeEEEeeeCC--------CceeeEEEecCC
Q 014590 104 DIDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP--------NAASLVDFDFDE 163 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~-~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~ 163 (422)
.+.++.--..+ .+++ +|| +++.+. .++.|.++|..+++.+.++..+ .....+.++|||
T Consensus 111 vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDG 188 (426)
T 3c75_H 111 ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDN 188 (426)
T ss_dssp EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTS
T ss_pred EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCC
Confidence 33444433334 6777 566 555554 4679999999999999888653 234568999999
Q ss_pred CeEE-Eec--CCeEEEEECCCCceeeecCCCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeee----eecCCcc
Q 014590 164 SKIV-GLI--GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQI----IRMHCAP 235 (422)
Q Consensus 164 ~~l~-~~~--~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~ 235 (422)
++++ +.. ++.|.+.|+.+.+.+-...-+.. ..+.+.+ ..+++.+.||.+.+.+..+++.... +.....+
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p 265 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDEL 265 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSC
T ss_pred CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCc
Confidence 9998 443 57899999999886533222221 2223333 3467777888888888866655422 2111222
Q ss_pred E-EEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC-------
Q 014590 236 V-TSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT------- 287 (422)
Q Consensus 236 v-~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~------- 287 (422)
+ ..+.+.++ ..++..+..+.+.+.|...+... .....++++|+++.+++...
T Consensus 266 ~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gth 345 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKH 345 (426)
T ss_dssp BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCT
T ss_pred eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccc
Confidence 1 12345655 55555567889999998644311 22233789999988777642
Q ss_pred ---CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEEe-cCCeEEEEECCCCceEEEe
Q 014590 288 ---AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVGG-IDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 288 ---dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~ 348 (422)
++.|.++|+.+++.+.++.... ...+++ |+||++ ++++.. .++.|.|+|+.+++.+.++
T Consensus 346 k~~s~~VsVID~~T~kvv~~I~vg~-~P~gia-~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 346 KAASRFVVVLNAETGERINKIELGH-EIDSIN-VSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEEE-EECEEE-ECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEECCCCeEEEEEECCC-CcCeEE-EccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 3579999999999998886542 478898 999999 888888 5999999999999999987
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.45 E-value=2e-11 Score=122.10 Aligned_cols=192 Identities=9% Similarity=-0.029 Sum_probs=126.0
Q ss_pred eeeEEEecCCCeEE-Eec-C----CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCe-------------
Q 014590 154 ASLVDFDFDESKIV-GLI-G----TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGT------------- 214 (422)
Q Consensus 154 ~~~~~~~~~~~~l~-~~~-~----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~------------- 214 (422)
....+|||||+.|+ +.. + .+|++||+.+++.+.....+......+|+++ ..|+.++.++.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 34589999999998 433 2 3699999999875432211111235677778 77777766543
Q ss_pred -EEEEeCCCcce--eeeee--cCCccEEEEEecCC-CEEEEEcCC-----CcEEEEeCCCC--c-cc------cceEeEE
Q 014590 215 -ARVFDMYSRKC--SQIIR--MHCAPVTSLSLSED-QLIISGSSL-----GSIAISGLSSD--Q-RL------TGIKTLC 274 (422)
Q Consensus 215 -i~iwd~~~~~~--~~~~~--~~~~~v~~l~~~~~-~~l~s~~~d-----g~i~iwd~~~~--~-~~------~~v~~~~ 274 (422)
|++|++.+++. ...+. .+...+..+.|+|+ ++++..+.+ ..|.+||+.++ + .. ..+...
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~- 322 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF- 322 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-
Confidence 88999977652 22232 23345889999987 677766644 38999999776 4 22 233333
Q ss_pred EecCCCEEEEEeC----CCeEEEEECCCC--eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC-CCceEEE
Q 014590 275 YNPCSRLVFAGTT----AGYASCWDLRTM--KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN-TGEVLSR 347 (422)
Q Consensus 275 ~~~~~~~l~~g~~----dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~-~~~~~~~ 347 (422)
++|+|+.|+..+. ++.|.+||+.++ +....+..+...+..+. ++ ++.++++...|+..+||.+. +++....
T Consensus 323 ~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~-~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 323 VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG-IA-GNRLFASYIHDAKSQVLAFDLDGKPAGA 400 (741)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE-EE-BTEEEEEEEETTEEEEEEEETTSCEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE-EE-CCEEEEEEEECCEEEEEEEeCCCCceee
Confidence 3589998888775 456999999874 33333444555566777 55 56678888899987777553 4555555
Q ss_pred ee
Q 014590 348 CV 349 (422)
Q Consensus 348 ~~ 349 (422)
+.
T Consensus 401 l~ 402 (741)
T 1yr2_A 401 VS 402 (741)
T ss_dssp CB
T ss_pred cc
Confidence 54
No 212
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.42 E-value=2.5e-10 Score=102.51 Aligned_cols=178 Identities=17% Similarity=0.156 Sum_probs=126.3
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCce--eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR 230 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 230 (422)
.+..++++++|+.+++...+. .|...+... .+..... .+ ..++.|.+||..+++.+..+.
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~--~~~~~~~~~~~~~~~~~~-----------~~-----~~~~~i~~~d~~~g~~~~~~~ 86 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDH--VWDGNSFDSKFVYQQRGL-----------GP-----IEEDTILVIDPNNAEILQSSG 86 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTC--CCCTTSBCTTSCBSCGGG-----------CS-----CCSCCEEEECTTTCCEEEEEC
T ss_pred CceEEEECCCCCEEEEeCCCC--eEEeeccCcceeeccccc-----------cc-----ccCCcEEEEECCCCeEEeccC
Confidence 456688888888777777763 233222111 1110000 00 146789999998898876654
Q ss_pred -cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCc-cc----------------cceEeEEEec-CCCEEEEEe-CCC
Q 014590 231 -MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ-RL----------------TGIKTLCYNP-CSRLVFAGT-TAG 289 (422)
Q Consensus 231 -~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~-~~----------------~~v~~~~~~~-~~~~l~~g~-~dg 289 (422)
.+-.....++++|+ +++++...++.|+.||..... .+ ..+..++++| ++.++++.+ .++
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 34457889999976 778888889999999985442 12 2588999999 788888886 689
Q ss_pred eEEEEECCCCeeeeeeccC----------CCceeeeeeEecC-CCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 290 YASCWDLRTMKSLWETRIS----------PNVVYSLQHLQND-TSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 290 ~i~iwd~~~~~~~~~~~~~----------~~~v~~l~~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.|++|| .+++.+..+... -.....++ ++|+ +.++++...++.|++||..+|+.+..+..
T Consensus 167 ~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia-~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~ 236 (329)
T 3fvz_A 167 RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLA-LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH 236 (329)
T ss_dssp EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEE-EETTTTEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEE-EECCCCEEEEEECCCCEEEEEECCCCcEEEEEec
Confidence 999999 557776666422 23478898 9998 77778888899999999998998887743
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.42 E-value=1.8e-13 Score=124.99 Aligned_cols=252 Identities=13% Similarity=0.074 Sum_probs=140.6
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEE
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCM 199 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 199 (422)
..++.+++++.||.|..||..+|+.+..+.. .......+.
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~--------------------------------------- 46 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTH--------------------------------------- 46 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----------------------------------------
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceE---------------------------------------
Confidence 3466899999999999999999998887765 221111111
Q ss_pred eeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCc-cEE-EEEecCCCEEEEEcCCCcEEEEeCCCCccc---cceEeEE
Q 014590 200 RYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA-PVT-SLSLSEDQLIISGSSLGSIAISGLSSDQRL---TGIKTLC 274 (422)
Q Consensus 200 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~-~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~v~~~~ 274 (422)
..+..+++++.|+.|+.||..+|+.+..+..+.. .+. +..+..++.+++++.|+.++.||..+|+.+ ..-....
T Consensus 47 -~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~ 125 (369)
T 2hz6_A 47 -VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADS 125 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---------------
T ss_pred -cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCccc
Confidence 1222356667889999999888887666543321 110 011113467888889999999999999887 1111245
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC---CEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 275 YNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT---STLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 275 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
++|++..+++++.++.|+.||.++++.++++..+. ..... ++.+. ..+++++.||.|+.||..+|+.+..+...
T Consensus 126 ~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~-~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 126 LSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASL-PEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp -------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBC-CCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred ccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCcc-ccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 56788899999999999999999999887765432 22333 33332 46777889999999999999998887755
Q ss_pred CCcccccCCCCCCeEEeee-------cccc--CCCc----ccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccC
Q 014590 352 IGSASSSSNKVSGVIERNE-------GRRL--SAGC----CIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 352 ~~~~~~~~~s~d~~i~~~~-------~~~~--~~~~----~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.....+...+.||.+++.. ...+ ..+. .+.....+ ..+.+....+..|+.++.||.|...+...
T Consensus 203 ~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~~~--~~~~sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 203 SPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYPFP--KETEAKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp SCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCCCC--CHHHHHHHSEEEECBEECSSCEECCEEEE
T ss_pred CceEEEEEecCCceEeccceeecccceeeeehhcCCcccceeeeeccC--ccccccccccceEEEecccCCEEecCccc
Confidence 4444445566677653210 0001 1111 11111111 11211112456788888899998888763
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=1.7e-09 Score=95.19 Aligned_cols=226 Identities=10% Similarity=-0.011 Sum_probs=148.9
Q ss_pred ccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeC---CCceeeEEEecCCCeEEEe-cCCeEEEEECCCCc
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL---PNAASLVDFDFDESKIVGL-IGTRICIWRRNGLR 183 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~-~~~~i~~w~~~~~~ 183 (422)
.+...+.++++ ++| ++++...++.|..||.. ++. ..+.. ......+++.+++..+++. .++.|..||.....
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~ 131 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKI 131 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCE
Confidence 35567888998 566 55555557899999986 433 23332 2345568889999877754 57899999984332
Q ss_pred eeeecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEEEEEcCCCcEEEEe
Q 014590 184 SVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (422)
Q Consensus 184 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd 260 (422)
..+... .......+++...+...++...++.|..||. +++.... ...+...+..++++++ .+.++...++.|..||
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 222221 2233344555555554555666789999998 6665432 2334456789999876 6666656678999999
Q ss_pred CCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee-eeccCCCceeeeeeEecCCCEEEEEecC
Q 014590 261 LSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW-ETRISPNVVYSLQHLQNDTSTLVVGGID 331 (422)
Q Consensus 261 ~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~~~d 331 (422)
. +++.. ..+.+++++++|+..++...++.|..||. +++... .+..+...+.+++ + +++.+.++.+ .
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~-~-~~g~l~v~~~-~ 285 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGIC-F-DGETIWFAME-C 285 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEE-E-CSSCEEEEET-T
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEE-e-cCCCEEEEec-C
Confidence 8 65532 56889999999997666667789999998 454321 2234456788998 7 8888766655 5
Q ss_pred CeEEEEECCCCc
Q 014590 332 GVLRVLDQNTGE 343 (422)
Q Consensus 332 g~v~vwd~~~~~ 343 (422)
+.+..++..+++
T Consensus 286 ~~l~~~~~~~~~ 297 (299)
T 2z2n_A 286 DKIGKLTLIKDN 297 (299)
T ss_dssp TEEEEEEEC---
T ss_pred CcEEEEEcCccc
Confidence 668788876543
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=3.9e-11 Score=119.97 Aligned_cols=231 Identities=10% Similarity=0.002 Sum_probs=149.6
Q ss_pred ccccceeEEEe-cCC-eEEEEecC-----CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCC---------
Q 014590 110 AHSVGVDQCRM-KRG-LILTGVGD-----KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGT--------- 172 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~--------- 172 (422)
+|...+..++| +|| +|+.++.+ ..|++||+.+++.+...........++|+|| +.|+ ++.++
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 34446778888 577 67666543 3699999999987654221111245889999 8887 55543
Q ss_pred -----eEEEEECCCCc---eeeecCCCc--eeeeEEEeeeCCeEEEecCC-----CeEEEEeCCCc--ceeeeeecCCcc
Q 014590 173 -----RICIWRRNGLR---SVFPSREGT--FMKGLCMRYFDPEAVVGCED-----GTARVFDMYSR--KCSQIIRMHCAP 235 (422)
Q Consensus 173 -----~i~~w~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~--~~~~~~~~~~~~ 235 (422)
.|++|++.++. .+.....++ ......+++++..|+..+.+ ..|.+||+.++ +....+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 38999998765 222222222 24456777888887766644 48999999876 314455555555
Q ss_pred EEEEEecCCCEEEEEcC----CCcEEEEeCCCCc--cc-------cceEeEEEecCCCEEEEEeCCCeEEEEECC-CCee
Q 014590 236 VTSLSLSEDQLIISGSS----LGSIAISGLSSDQ--RL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR-TMKS 301 (422)
Q Consensus 236 v~~l~~~~~~~l~s~~~----dg~i~iwd~~~~~--~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~ 301 (422)
+....+..++.++..+. ++.|.+||+.++. .. ..+..++++ ++.++++...|+..++|.+. +++.
T Consensus 319 ~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 319 QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCE
T ss_pred eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCc
Confidence 55544433466666655 3459999988742 11 345667776 56677888888887776544 4555
Q ss_pred eeeecc-CCCceeeeeeEecCCCEEEE----EecCCeEEEEECCCCc
Q 014590 302 LWETRI-SPNVVYSLQHLQNDTSTLVV----GGIDGVLRVLDQNTGE 343 (422)
Q Consensus 302 ~~~~~~-~~~~v~~l~~~s~~~~~l~s----~~~dg~v~vwd~~~~~ 343 (422)
...+.. +.+.+..+. ++|+++.|+. ....++|++||+.+++
T Consensus 398 ~~~l~~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLS-GRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEECBCSSSCEEEEEE-CCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eeeccCCCCeEEEEee-cCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 566654 356788888 8899886552 2345899999998876
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.40 E-value=4.2e-10 Score=110.93 Aligned_cols=234 Identities=13% Similarity=0.153 Sum_probs=163.0
Q ss_pred EEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCC-C-----ceeeEEEecCCCeEEEe------cCCeEEEEECCCCcee
Q 014590 118 CRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-N-----AASLVDFDFDESKIVGL------IGTRICIWRRNGLRSV 185 (422)
Q Consensus 118 v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~l~~~------~~~~i~~w~~~~~~~~ 185 (422)
+.+.++.++.++.|+.|..+|..+|+.+..+... . .........++..+++. .++.|..||..+++.+
T Consensus 117 ~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 117 VAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred cEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 3445678889999999999999999999887753 1 11111111255555543 2689999999999876
Q ss_pred eecCC--Cc------------------------------eeeeEEEeeeCCeEEEecCCCe-------------------
Q 014590 186 FPSRE--GT------------------------------FMKGLCMRYFDPEAVVGCEDGT------------------- 214 (422)
Q Consensus 186 ~~~~~--~~------------------------------~~~~~~~~~~~~~l~~~~~d~~------------------- 214 (422)
+.... +. .-...++.+....++.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 43321 00 0012334444566888877764
Q ss_pred EEEEeCCCcceeeeeec--CC-------ccEEEEEec-CC---CEEEEEcCCCcEEEEeCCCCccc-----cc---e---
Q 014590 215 ARVFDMYSRKCSQIIRM--HC-------APVTSLSLS-ED---QLIISGSSLGSIAISGLSSDQRL-----TG---I--- 270 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~--~~-------~~v~~l~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~---v--- 270 (422)
|..+|..+|+.+..++. |. .+....... .+ ..++.++.+|.++++|..+|+.+ .. .
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 99999999999988764 21 122111211 22 37889999999999999999875 10 0
Q ss_pred -----------------------------------EeEEEecCCCEEEEEeC----------------------------
Q 014590 271 -----------------------------------KTLCYNPCSRLVFAGTT---------------------------- 287 (422)
Q Consensus 271 -----------------------------------~~~~~~~~~~~l~~g~~---------------------------- 287 (422)
..++++|+..++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 12688998888887632
Q ss_pred -----------------CCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 288 -----------------AGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 288 -----------------dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+|.|..||+.+++.++++..+.. +..-. +...+.+++.|+.||.++.||.++|+.+.++..
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~-~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGT-LSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCE-EEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCcc-ceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 37899999999999998876643 33334 556788999999999999999999999999876
Q ss_pred cCC
Q 014590 351 DIG 353 (422)
Q Consensus 351 ~~~ 353 (422)
...
T Consensus 515 ~~~ 517 (689)
T 1yiq_A 515 ASG 517 (689)
T ss_dssp SSC
T ss_pred CCC
Confidence 544
No 217
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.40 E-value=1.5e-11 Score=110.35 Aligned_cols=288 Identities=12% Similarity=0.004 Sum_probs=179.0
Q ss_pred eEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEEEecCCeEEEEECCCCceeeecC-CCc
Q 014590 116 DQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSR-EGT 192 (422)
Q Consensus 116 ~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~-~~~ 192 (422)
.+... .++.+..++.++.|..|| .+++.+..+..+... ..+....++...+++.+ +..+|. +++...... ...
T Consensus 23 ~~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~ 98 (330)
T 3hxj_A 23 SSPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKA 98 (330)
T ss_dssp CCCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC---
T ss_pred cCceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCC
Confidence 34455 466888888899999999 888887776654333 22445555654445544 888886 444332211 111
Q ss_pred eeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-----
Q 014590 193 FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~----- 267 (422)
......+ .+..+..++.++.+..+|.. ++.......+...+.++...+++.++.++.++.|..+|.. ++..
T Consensus 99 ~~~~~~~--~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 99 IVSDFTI--FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp --CCEEE--ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred cccCceE--ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEec
Confidence 1112222 26668889989999999998 8777776655555666667666668888888999999988 6654
Q ss_pred --cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
..+.++...+++... +++ +.|..+| .+++.+.........+.++. .+++|. |..++.++.+..+|. +++.+
T Consensus 175 ~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~-~~~~g~-l~v~t~~~gl~~~~~-~g~~~ 247 (330)
T 3hxj_A 175 NDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPA-ISEDGT-IYVTSLDGHLYAINP-DGTEK 247 (330)
T ss_dssp SSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCE-ECTTSC-EEEEETTTEEEEECT-TSCEE
T ss_pred CCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceE-ECCCCe-EEEEcCCCeEEEECC-CCCEe
Confidence 445667776777644 444 6799999 77877777766666788887 777765 555667788888874 57777
Q ss_pred EEeeecCCcccccCCCCCCeEEeeecc----ccC-CCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccCCC
Q 014590 346 SRCVMDIGSASSSSNKVSGVIERNEGR----RLS-AGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNYSD 419 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~d~~i~~~~~~----~~~-~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~~~ 419 (422)
..+..............++.+++.+.. .+. ......... .....+.++.. .+..|..++.+|.+.+...+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~-~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFE-TGSWIIATPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEE-CSSCCCSCCEECTTCCEEEECTTSCEEEEEC----
T ss_pred EEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEE-cCCccccceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 666554332222223345555533221 111 111111111 12345666666 45567779999999998876543
No 218
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.39 E-value=2.6e-13 Score=85.31 Aligned_cols=49 Identities=33% Similarity=0.548 Sum_probs=40.5
Q ss_pred CCCccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHH
Q 014590 19 KPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLL 67 (422)
Q Consensus 19 ~~~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 67 (422)
..+..+..||.|++.+||+||+++++.++++|||+|+.++.++.+|+.+
T Consensus 4 ~~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 4 FPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp -----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 3456889999999999999999999999999999999999999999864
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=1.3e-09 Score=96.32 Aligned_cols=218 Identities=12% Similarity=0.058 Sum_probs=147.3
Q ss_pred eeccccceeEEEec--CC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCce
Q 014590 108 WKAHSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS 184 (422)
Q Consensus 108 l~~H~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~ 184 (422)
+..+..--.+..|. ++ ++++...++.|..||..+++. ..+..+..+..++++++++.+++. ++.|.+||.++++.
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSA 85 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcE
Confidence 33444455677773 34 677777789999999988765 445556667779999999966655 67899999987763
Q ss_pred e-eecC-C---CceeeeEEEeeeCCeEEEec-----------CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CE-
Q 014590 185 V-FPSR-E---GTFMKGLCMRYFDPEAVVGC-----------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL- 246 (422)
Q Consensus 185 ~-~~~~-~---~~~~~~~~~~~~~~~l~~~~-----------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~- 246 (422)
. +... . ......+.+.+++...++.. ..+.|..++.. ++... +..+....+.++|+|+ +.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEE
Confidence 2 2221 1 12233445555555444332 12345555542 33332 2233345688999987 44
Q ss_pred EEEEcCCCcEEEEeC--CCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCce
Q 014590 247 IISGSSLGSIAISGL--SSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVV 312 (422)
Q Consensus 247 l~s~~~dg~i~iwd~--~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v 312 (422)
+++.+.++.|..||+ .++... ..+..++++++|++.++...++.|..||..+++.+..+..+...+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 456677889999987 444321 357889999999988888888899999999999988888877789
Q ss_pred eeeeeEe-cCCCEEEEEec
Q 014590 313 YSLQHLQ-NDTSTLVVGGI 330 (422)
Q Consensus 313 ~~l~~~s-~~~~~l~s~~~ 330 (422)
++++ |. |+++.|+.++.
T Consensus 244 t~~~-f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 244 TSCC-FGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEE-EESGGGCEEEEEEB
T ss_pred eEEE-EeCCCCCEEEEEcC
Confidence 9999 87 88887665554
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=8.7e-11 Score=106.02 Aligned_cols=238 Identities=8% Similarity=0.022 Sum_probs=160.1
Q ss_pred ceeeEEeeccccceeEEEe-cCC-eEEEEe----------cCCeEEEEEcCCCeEEEeeeCC--------CceeeEEEec
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP--------NAASLVDFDF 161 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~-~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~ 161 (422)
.+.+.++.--..+ .+.+ +|+ +++.+. .++.|.+||+.+++.+.++..+ .....++++|
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA 133 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence 3455666544445 6888 566 666654 3789999999999999998754 2355699999
Q ss_pred CCCeEE-Eec--CCeEEE--EECCCCceeeecCCCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCC-----cceee---
Q 014590 162 DESKIV-GLI--GTRICI--WRRNGLRSVFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYS-----RKCSQ--- 227 (422)
Q Consensus 162 ~~~~l~-~~~--~~~i~~--w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-----~~~~~--- 227 (422)
||++++ +.. +..+.+ +|..+ ...+..... ..+.+.+. .+++.+.|+.+.+.|..+ ++...
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v~~~-----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t 207 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD-DQLTKSASC-----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT 207 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE-EEEEECSSC-----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh-ceEEECCCc-----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee
Confidence 999988 443 467888 88877 222221111 11223333 356677888888889886 44331
Q ss_pred -eeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC
Q 014590 228 -IIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT 287 (422)
Q Consensus 228 -~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~ 287 (422)
.+.....+. ...+++.++..+. +.+.+.|+.+.... .....++++|+++.++++..
T Consensus 208 ~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~ 283 (368)
T 1mda_H 208 GAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTV 283 (368)
T ss_dssp TTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred eeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEec
Confidence 121123343 3334455555556 89999998653210 11223789999998887643
Q ss_pred -C--------CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCC-EEEEEe-cCCeEEEEECCCCceEEEeeecCC
Q 014590 288 -A--------GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTS-TLVVGG-IDGVLRVLDQNTGEVLSRCVMDIG 353 (422)
Q Consensus 288 -d--------g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~ 353 (422)
+ +.+.++|+.+++.+.++.... ....++ ++|||+ .+++.. .++.|.++|+.+++.+.++.....
T Consensus 284 ~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~-~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~ 358 (368)
T 1mda_H 284 EHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAII-AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp ECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEE-ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred cccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEE-ECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence 2 356799999999988887653 578898 999998 456666 599999999999999999875433
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.36 E-value=9e-10 Score=101.76 Aligned_cols=237 Identities=11% Similarity=-0.032 Sum_probs=157.6
Q ss_pred eeeEEEecCCCeEEE-ecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCC--eEEEEeCCCcceeeee-
Q 014590 154 ASLVDFDFDESKIVG-LIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG--TARVFDMYSRKCSQII- 229 (422)
Q Consensus 154 ~~~~~~~~~~~~l~~-~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~- 229 (422)
...++++++++.+++ ..++.|+.||.+++............. +++.+.+..++++..++ .|.+++...+.....+
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 445889999986664 456899999998876432222233233 67777777788877765 8999998765543333
Q ss_pred ---ecCCccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc-----------cc-eE-eEEEecC-CCEEEEEeCCCeE
Q 014590 230 ---RMHCAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-----------TG-IK-TLCYNPC-SRLVFAGTTAGYA 291 (422)
Q Consensus 230 ---~~~~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-----------~~-v~-~~~~~~~-~~~l~~g~~dg~i 291 (422)
......+.+++++| ++.++.+..++.|+.||..++... .. .. .++|+|+ +.++++-..++.|
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 21445678899998 577777777889999998766432 11 13 9999995 5555566678899
Q ss_pred EEEECCCCeeeeeeccCC---------------CceeeeeeEecCCCEEEEEe-cCCeEEEEECCCCceEEEeeecCCcc
Q 014590 292 SCWDLRTMKSLWETRISP---------------NVVYSLQHLQNDTSTLVVGG-IDGVLRVLDQNTGEVLSRCVMDIGSA 355 (422)
Q Consensus 292 ~iwd~~~~~~~~~~~~~~---------------~~v~~l~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~ 355 (422)
+.|+.... +..+.++. .....++ ++++|+++++-+ .++.|+.|++.+++ +.++.++...
T Consensus 292 ~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~- 366 (409)
T 3hrp_A 292 YKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDV- 366 (409)
T ss_dssp EEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTC-
T ss_pred EEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCC-
Confidence 99997643 22332321 3467888 999999888887 89999999987775 4445443220
Q ss_pred cccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe--cCEEEEEEeCCCeEEEEEcc
Q 014590 356 SSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV--GMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 356 ~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--~~~~l~s~s~Dg~i~iW~~~ 416 (422)
.+..+|.. ....-.....+++ ++.++++-..+++|+.++++
T Consensus 367 ---~g~~~g~~-----------------~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 367 ---ASQIDGTP-----------------LEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp ---BSCCCBST-----------------TTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred ---CCcCCCCh-----------------hceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 11111100 0011135778888 47888888889999888763
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=4.3e-09 Score=92.90 Aligned_cols=193 Identities=8% Similarity=0.070 Sum_probs=127.4
Q ss_pred eeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec
Q 014590 154 ASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM 231 (422)
Q Consensus 154 ~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 231 (422)
.....|++++..++ ...++.|..||..++........+ ....+++..++. ++++. ++.|.+||..+++.......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-PVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-CEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-ceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEec
Confidence 34578888766655 445789999999887643222222 334556666666 44454 56899999988765433221
Q ss_pred ----CCccEEEEEecCC-CEEEEEcC-----------CCcEEEEeCCCCccc------cceEeEEEecCCCEEEE-EeCC
Q 014590 232 ----HCAPVTSLSLSED-QLIISGSS-----------LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFA-GTTA 288 (422)
Q Consensus 232 ----~~~~v~~l~~~~~-~~l~s~~~-----------dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~-g~~d 288 (422)
....++.++++|+ +++++... .+.|..++.. ++.. .....++|+|+++.++. .+.+
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 1245788999987 54443321 2344444442 3322 56788999999987754 4567
Q ss_pred CeEEEEEC--CCCee-----eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 289 GYASCWDL--RTMKS-----LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 289 g~i~iwd~--~~~~~-----~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
+.|.+||+ .++.. +..+..+.+....++ ++++|++.++...++.|.+||..+|+.+..+..+
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~-~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC-IDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE-EBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE-ECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 88999987 44532 223333445678888 9999988888777889999999989988887654
No 223
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=1.2e-09 Score=107.50 Aligned_cols=184 Identities=15% Similarity=0.160 Sum_probs=122.8
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCcee------------eEEEecCCCeEEEecCCeEEEEECCCCceeee
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS------------LVDFDFDESKIVGLIGTRICIWRRNGLRSVFP 187 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~ 187 (422)
..++.++.++.++.|.-+|..+|+.+..+....... ..++ .++..++++.++.+..+|..+++.+..
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 357788888889999999999999998886543210 1222 234444488899999999999987654
Q ss_pred cCCCc-----eeeeEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCC---c-------------------
Q 014590 188 SREGT-----FMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHC---A------------------- 234 (422)
Q Consensus 188 ~~~~~-----~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~---~------------------- 234 (422)
..... .... .....+..++++.. ++.|..+|.++|+.+..+.... .
T Consensus 143 ~~~~~~~~~~~~~~-~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 143 QQTTDPAKPYSITG-APRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp EECSCTTSSCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred eccCCCCCcceecC-CCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 33211 1000 01112445666543 5899999999999988775210 0
Q ss_pred ---------cEEEEEecCC-CEEEEEcCCC-------------------cEEEEeCCCCccc----------------cc
Q 014590 235 ---------PVTSLSLSED-QLIISGSSLG-------------------SIAISGLSSDQRL----------------TG 269 (422)
Q Consensus 235 ---------~v~~l~~~~~-~~l~s~~~dg-------------------~i~iwd~~~~~~~----------------~~ 269 (422)
....++++|. +.++.++.++ .|..+|..+|+.+ .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 0113567665 7888887765 3999999999876 01
Q ss_pred eEeEEEecCCC---EEEEEeCCCeEEEEECCCCeeeeee
Q 014590 270 IKTLCYNPCSR---LVFAGTTAGYASCWDLRTMKSLWET 305 (422)
Q Consensus 270 v~~~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~ 305 (422)
+....+..+|+ .++.++.+|.++++|..+|+.+...
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 12222334665 6889999999999999999988443
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=2.1e-09 Score=95.34 Aligned_cols=228 Identities=10% Similarity=0.035 Sum_probs=149.6
Q ss_pred cceeeEEeeccccceeEEEe-cCC--eEEEEecCCeEEEEEcCCCeEEEeeeC-CCceeeEEEecCCCeEEEec-CCeEE
Q 014590 101 GRIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIVGLI-GTRIC 175 (422)
Q Consensus 101 ~~~~~~~l~~H~~~v~~v~~-~~~--~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~i~ 175 (422)
.+..+..+..+........| +++ +++++..++.|..|+. +++. ..+.. ......++++++|+.+++.. ++.|.
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 34566677777777888888 555 6777778899999998 4553 33333 33456699999999777654 57899
Q ss_pred EEECCCCceeeec-CCCc---eeeeEEEeeeCCeEEE----ecC-------------CCeEEEEeCCCcceeeeeecCCc
Q 014590 176 IWRRNGLRSVFPS-REGT---FMKGLCMRYFDPEAVV----GCE-------------DGTARVFDMYSRKCSQIIRMHCA 234 (422)
Q Consensus 176 ~w~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~ 234 (422)
.|+.+.....+.. ..+. ....+.+.+++...++ |.. .+.|..+|..+++..... ...
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 111 RSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp EECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred EECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 9998733222221 1111 1223555555655554 332 356888888777654433 334
Q ss_pred cEEEEEecCC-CEEEEEcCC------CcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 235 PVTSLSLSED-QLIISGSSL------GSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 235 ~v~~l~~~~~-~~l~s~~~d------g~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
..+.++|+|+ +.++.+... +.|..|++..+... ..+..++++++|++ .+++.+| |.+|+.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-wv~~~~g-v~~~~~- 265 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-WSSSGTG-VCVFDS- 265 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-EECCSSE-EEEECT-
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-EEecCCc-EEEECC-
Confidence 5678999987 556666554 78999998654311 33457899999994 4445554 999998
Q ss_pred CCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEE
Q 014590 298 TMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLD 338 (422)
Q Consensus 298 ~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd 338 (422)
+++.+..+..+. .+.+++ |+++++.|+.++.++ +..++
T Consensus 266 ~g~~~~~~~~~~-~~~~~~-f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCT-FDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp TSCEEEEEECSS-CCCEEE-ECTTSCEEEEEETTE-EEEEE
T ss_pred CCCEEEEEECCC-ceeEEE-EeCCCCEEEEEcCCe-EEEEE
Confidence 477777776654 578888 889998888887765 44333
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.30 E-value=1.2e-08 Score=89.73 Aligned_cols=188 Identities=9% Similarity=-0.050 Sum_probs=127.5
Q ss_pred CceeeEEEecCCCeEEEe-cCCeEEEEECCCCcee-eecCC-CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceee-
Q 014590 152 NAASLVDFDFDESKIVGL-IGTRICIWRRNGLRSV-FPSRE-GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ- 227 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~-~~~~i~~w~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~- 227 (422)
.....+++.+++...++. .++.|.+|+.. ++.. +.... ......+++...+...++...++.|..+|.. ++...
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEe
Confidence 345668899999887755 57899999988 4422 22211 1223344444445445555567899999987 65432
Q ss_pred eeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 228 IIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 228 ~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
........+..+++.++ .++++...++.|..+|.. ++.. ..+..++++++|++.++...++.|..+|. +
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 22223456889999876 666666667889999986 4432 56889999999997766666788999998 4
Q ss_pred Ceeee-eeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 299 MKSLW-ETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 299 ~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
++... ....+...+.+++ ++++|+..++....+.|.+||. +++..
T Consensus 176 g~~~~~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGIT-SGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp CCEEEEECSSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CcEEEeeCCCCCCCcceEE-ECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 54432 2223345678898 8899987777777788999998 45543
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=1.4e-12 Score=119.09 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=83.1
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc--------cceEe
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL--------TGIKT 272 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~ 272 (422)
.+..+++++.|+.|+.||..+|+.+..+.. +.+.+..+..+ ..+++++.||.|+.||..+|+.+ ..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 455689999999999999999999988876 44444434444 57778889999999999888765 11111
Q ss_pred -EEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 273 -LCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 273 -~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
..+. ++..+++|+.++.|+.||..+|+.++++..+.. .. ++|++..+++++.|+.|+.||.++|+.+..+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~-~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DS-LSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----cc-ccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1111 345778888899999999999999988876542 33 567888999999999999999999988776643
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=2.2e-08 Score=89.63 Aligned_cols=211 Identities=11% Similarity=0.016 Sum_probs=140.6
Q ss_pred ceeEEEe-cC-C-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCcee-eecC
Q 014590 114 GVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-FPSR 189 (422)
Q Consensus 114 ~v~~v~~-~~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-~~~~ 189 (422)
...+..| ++ + ++++...++.|..||..+++.. .+..+..+..++++++++.++++. ..|.+||..+++.. +...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEECS
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEeeC
Confidence 3456777 44 4 6777777899999999887653 344455667789999998888764 45999998877632 2221
Q ss_pred C----CceeeeEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE-EEEcCCCcEE
Q 014590 190 E----GTFMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSIA 257 (422)
Q Consensus 190 ~----~~~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l-~s~~~dg~i~ 257 (422)
. ......+.+.+.+..+++... .+.|..++ +++... +..+......++|+|+ +.+ ++.+.++.|.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 122334455555554443321 24566666 454433 2223345678999987 444 4556678999
Q ss_pred EEeCC--CC-ccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEe-cC
Q 014590 258 ISGLS--SD-QRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQ-ND 321 (422)
Q Consensus 258 iwd~~--~~-~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s-~~ 321 (422)
+||+. ++ ... ..+..++++++|++.++...++.|.+||. +++.+..+..+...+++++ |+ ++
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~a-f~g~d 282 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA-FIGPD 282 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE-EESTT
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEE-EecCC
Confidence 99986 55 311 34667899999988777767788999998 5777777777777799999 87 88
Q ss_pred CCEEEEEecC
Q 014590 322 TSTLVVGGID 331 (422)
Q Consensus 322 ~~~l~s~~~d 331 (422)
++.|+.++..
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 8776555443
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.3e-09 Score=107.97 Aligned_cols=230 Identities=12% Similarity=0.098 Sum_probs=147.0
Q ss_pred ccccceeEEEe-cCC-eEEE-----EecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecCC---------
Q 014590 110 AHSVGVDQCRM-KRG-LILT-----GVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGT--------- 172 (422)
Q Consensus 110 ~H~~~v~~v~~-~~~-~l~s-----~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~--------- 172 (422)
+|...+..++| +|| +||- |+.+..|++||+.+++.+...........++|+ |++.|+ ++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 46667888888 577 5553 222357999999999866542111112457899 999988 66553
Q ss_pred ----eEEEEECCCCce---eeecCCC---ceeeeEEEeeeCCeEEEe-c---CCCeEEEEeCCCcc-eeeeeecCCccEE
Q 014590 173 ----RICIWRRNGLRS---VFPSREG---TFMKGLCMRYFDPEAVVG-C---EDGTARVFDMYSRK-CSQIIRMHCAPVT 237 (422)
Q Consensus 173 ----~i~~w~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~l~~~-~---~d~~i~iwd~~~~~-~~~~~~~~~~~v~ 237 (422)
.|++|++.+... ++....+ .......+++++..|+.. + .++.|.++|+.++. ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 499999987652 2322222 122345667777775432 2 23589999998764 4455555655555
Q ss_pred EEEecCCC-EEEEEcCC---CcEEEEeCCCCcc-----c----cceEeEEEecCCCEEEEEeCCC---eEEEEECCCCee
Q 014590 238 SLSLSEDQ-LIISGSSL---GSIAISGLSSDQR-----L----TGIKTLCYNPCSRLVFAGTTAG---YASCWDLRTMKS 301 (422)
Q Consensus 238 ~l~~~~~~-~l~s~~~d---g~i~iwd~~~~~~-----~----~~v~~~~~~~~~~~l~~g~~dg---~i~iwd~~~~~~ 301 (422)
....++++ +++.+..+ +.|..+|+.++.. + ..+. .|+++++.|+....++ .|++||+..+.
T Consensus 285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~- 361 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR- 361 (693)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-
Confidence 54333444 44444443 6799999987654 1 3333 8899999887776543 68999988543
Q ss_pred eeeecc-CCCceeeeeeEecCCCEEEEEecC----CeEEEEECCCCce
Q 014590 302 LWETRI-SPNVVYSLQHLQNDTSTLVVGGID----GVLRVLDQNTGEV 344 (422)
Q Consensus 302 ~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~d----g~v~vwd~~~~~~ 344 (422)
...+.. +.+.+..+. ++++++.|+....+ ++++.||+.+++.
T Consensus 362 ~~~l~~p~~~~~~~~~-~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 362 VREVALPGLGSVSGFN-GKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEECCSSSSEEEECC-CCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred eEEeecCCCceEEeee-cCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 344432 345677777 78888866655544 8999999987764
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.24 E-value=1.2e-08 Score=98.32 Aligned_cols=185 Identities=10% Similarity=0.021 Sum_probs=119.0
Q ss_pred ecCCeEEEEec-CCeEEEEEc-CCCeEEEeeeCCCce------------eeEEEecCCCeEEEecCCeEEEEECCCCcee
Q 014590 120 MKRGLILTGVG-DKVMRLWSL-EGYKCVEEYSLPNAA------------SLVDFDFDESKIVGLIGTRICIWRRNGLRSV 185 (422)
Q Consensus 120 ~~~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~ 185 (422)
..++.++.++. ++.|.-+|. .+|+.+..+...... ...++ .++..++++.++.+..+|..+++.+
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 34777777777 899999999 999999887654321 01222 2344444888999999999999876
Q ss_pred eecCCCc-----eeeeEEEeeeCCeEEEecC------CCeEEEEeCCCcceeeeeecCCcc-------------------
Q 014590 186 FPSREGT-----FMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAP------------------- 235 (422)
Q Consensus 186 ~~~~~~~-----~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~------------------- 235 (422)
....... .... .....+..+++++. ++.|..+|.++|+.+..+......
T Consensus 139 W~~~~~~~~~~~~~~~-~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQ-APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEEECCCGGGTCBCCS-CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EEecCCCCCccceecc-CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 5432211 1110 01113455666665 789999999999988776532110
Q ss_pred ------------------E-EEEEecCC-CEEEEEcCC----------------CcEEEEeCCCCccc-----c------
Q 014590 236 ------------------V-TSLSLSED-QLIISGSSL----------------GSIAISGLSSDQRL-----T------ 268 (422)
Q Consensus 236 ------------------v-~~l~~~~~-~~l~s~~~d----------------g~i~iwd~~~~~~~-----~------ 268 (422)
+ ..+++.+. +.++.++.+ +.|..+|..+|+.+ .
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0 12445554 566665532 35889999988876 1
Q ss_pred --ceEeE---EEecCCC---EEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 269 --GIKTL---CYNPCSR---LVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 269 --~v~~~---~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
.+... ...++|+ .++.++.+|.++++|..+++.+....
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 11122 2224674 67788999999999999999887654
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=2.5e-09 Score=96.57 Aligned_cols=223 Identities=9% Similarity=0.059 Sum_probs=140.0
Q ss_pred cceeEEEe-cCC-eEEEEe--cCCeEEEEEcCCCeEEEeeeC--------CCceeeEEEecCCCeEEEec------CCeE
Q 014590 113 VGVDQCRM-KRG-LILTGV--GDKVMRLWSLEGYKCVEEYSL--------PNAASLVDFDFDESKIVGLI------GTRI 174 (422)
Q Consensus 113 ~~v~~v~~-~~~-~l~s~~--~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~------~~~i 174 (422)
..+..+++ ++| .+++.. .++.++||.+.+++.. .+.. -..+..++++++++.+++.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67889999 477 666653 2343666666566543 3321 12345589999987666443 5799
Q ss_pred EEEECCCCcee--eecCC-----CceeeeEEEeeeCCe-EEEec---CCCeEEEEeCCCcceeeeeecCCccEE-EEEec
Q 014590 175 CIWRRNGLRSV--FPSRE-----GTFMKGLCMRYFDPE-AVVGC---EDGTARVFDMYSRKCSQIIRMHCAPVT-SLSLS 242 (422)
Q Consensus 175 ~~w~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~-l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~ 242 (422)
.+||+.+++.+ +.... ......+.+...+.. +++.. .++.|.+||+.+++....+..|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999887632 22211 112234555544445 44544 678999999998887766655432110 02233
Q ss_pred CC-CEEEEEcCCCcEEEEeCCCCccccceEeEEEecCCCEEEEEeCCC-eEEEEECC---CCe-----eee--eeccCCC
Q 014590 243 ED-QLIISGSSLGSIAISGLSSDQRLTGIKTLCYNPCSRLVFAGTTAG-YASCWDLR---TMK-----SLW--ETRISPN 310 (422)
Q Consensus 243 ~~-~~l~s~~~dg~i~iwd~~~~~~~~~v~~~~~~~~~~~l~~g~~dg-~i~iwd~~---~~~-----~~~--~~~~~~~ 310 (422)
++ ..+.+.+.++.++.|. ..+..++++|+|+.|+.+..++ .+..++.. .+. ... ...++.+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~-------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 248 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPH-------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP 248 (343)
T ss_dssp ETTEECBEECTTSCEECCC-------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC
T ss_pred ECCEEEEeccCCCceecee-------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC
Confidence 23 4566677888887775 3578899999999888887666 55555532 110 011 1113344
Q ss_pred ceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 311 VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
....++ ++++|.++++...++.|.+||..+++.
T Consensus 249 ~pdgia-~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 249 ICDGIS-IDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp SCSCEE-ECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred CCceEE-ECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 566788 999999999999999999999855653
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.23 E-value=4.3e-09 Score=94.94 Aligned_cols=245 Identities=6% Similarity=-0.091 Sum_probs=164.7
Q ss_pred eEEEEecCC----eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee----------cCCeEEEEECCCCceeeec
Q 014590 124 LILTGVGDK----VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPS 188 (422)
Q Consensus 124 ~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~i~~w~~~~~~~~~~~ 188 (422)
.+++...++ .|.+.|..+++.+.++...... .+.++||++.++ +. .++.|.+||+.+.+.+...
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 444444444 8889999999999999876665 799999999988 43 3688999999998865332
Q ss_pred CC--------CceeeeEEEeeeCCeEEEecC--CCeEEE--EeCCCcceeeeeecCCccEEEEEecCC--CEEEEEcCCC
Q 014590 189 RE--------GTFMKGLCMRYFDPEAVVGCE--DGTARV--FDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLG 254 (422)
Q Consensus 189 ~~--------~~~~~~~~~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~v~~l~~~~~--~~l~s~~~dg 254 (422)
.- +.....+.++++++.++++.. +..+.+ +|+.+ +..+... +. ..+.|+ ..+++.+.||
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTT
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCC
Confidence 11 123457888899998887764 467888 99876 4444321 11 112232 5666777888
Q ss_pred cEEEEeCCC-----Cccc-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCe--eeeeecc-------CC
Q 014590 255 SIAISGLSS-----DQRL-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMK--SLWETRI-------SP 309 (422)
Q Consensus 255 ~i~iwd~~~-----~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~-------~~ 309 (422)
.+.+.|+.+ ++.. .+. + .+++..++..+. +.|.+.|..+.. .+..+.. +.
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~ 260 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccc
Confidence 888888876 3221 122 3 667777666666 899999986532 2222211 11
Q ss_pred ---CceeeeeeEecCCCEEEEEec-C--------CeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCC
Q 014590 310 ---NVVYSLQHLQNDTSTLVVGGI-D--------GVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAG 377 (422)
Q Consensus 310 ---~~v~~l~~~s~~~~~l~s~~~-d--------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~ 377 (422)
.....++ ++|+++.++.+.. + +.+.++|+.+++.+..+....
T Consensus 261 ~~p~g~~~v~-~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~------------------------- 314 (368)
T 1mda_H 261 FRSAGFQMVA-KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH------------------------- 314 (368)
T ss_dssp EEECSSSCEE-EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-------------------------
T ss_pred cccCcceeeE-EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-------------------------
Confidence 1112256 8899998886543 2 356699999999988886531
Q ss_pred cccccCCCCCCCCeEEEEe--cCE-EEEEEe-CCCeEEEEEccCCC
Q 014590 378 CCIDRIPKTIRPPITCLAV--GMK-KVVTTH-NSKYIRLWKFNYSD 419 (422)
Q Consensus 378 ~~~~~~~~~h~~~v~~i~~--~~~-~l~s~s-~Dg~i~iW~~~~~~ 419 (422)
...+++| |++ .+++.. .++.|.++|+.+.+
T Consensus 315 ------------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 315 ------------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp ------------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred ------------CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 3567777 565 677777 69999999998754
No 232
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=2.1e-10 Score=103.83 Aligned_cols=142 Identities=14% Similarity=0.038 Sum_probs=105.8
Q ss_pred eeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-----------eeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC
Q 014590 194 MKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-----------CSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~ 262 (422)
...+++......+++|+.+ .+.+|++.+.+ ..... .+.. |..++| .++.++++ .++.|++||++
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESS
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEch
Confidence 4567777777778888887 55669865433 11222 3556 999999 66888888 88999999987
Q ss_pred CCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEE
Q 014590 263 SDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLR 335 (422)
Q Consensus 263 ~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~ 335 (422)
+.... ..+..+.+.+. .+++++.||.|.+||+.++.... +...|.+++ |+|+| ++.|..||.++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~-WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFD-VTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEE-ECSSE--EEEEETTSCEE
T ss_pred hhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEE-EcCCc--eEEEEcCCcEE
Confidence 65543 45666665543 48889999999999999776643 345799999 99999 67899999999
Q ss_pred EEECCCCce--EEEee
Q 014590 336 VLDQNTGEV--LSRCV 349 (422)
Q Consensus 336 vwd~~~~~~--~~~~~ 349 (422)
+|+...++. ..++.
T Consensus 186 ~~~~~~~~~~~k~~I~ 201 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFS 201 (388)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EEcCCCccccccceec
Confidence 999886665 55553
No 233
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.22 E-value=2.2e-08 Score=96.46 Aligned_cols=185 Identities=8% Similarity=-0.022 Sum_probs=122.1
Q ss_pred cCCeEEEEec-CCeEEEEEc-CCCeEEEeeeCCCce------------eeEEEec-CCC----eEEEecCCeEEEEECCC
Q 014590 121 KRGLILTGVG-DKVMRLWSL-EGYKCVEEYSLPNAA------------SLVDFDF-DES----KIVGLIGTRICIWRRNG 181 (422)
Q Consensus 121 ~~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~------------~~~~~~~-~~~----~l~~~~~~~i~~w~~~~ 181 (422)
.++.++.++. ++.|.-+|. .+|+.+..+...... ..++++| ++. .++++.++.+..+|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 4677777777 899999999 999999888754321 1245554 333 44588899999999999
Q ss_pred CceeeecCCCc-----eeeeEEEeeeCCeEEEec------CCCeEEEEeCCCcceeeeeecCCcc---------------
Q 014590 182 LRSVFPSREGT-----FMKGLCMRYFDPEAVVGC------EDGTARVFDMYSRKCSQIIRMHCAP--------------- 235 (422)
Q Consensus 182 ~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~~--------------- 235 (422)
++.+....... .... .....+..+++++ .++.|+.+|.++|+.+..+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~s-sP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTI-APYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCS-CCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CCEEEeecCCCCCccceeec-CCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98775432221 1110 0011244566665 3799999999999988776532111
Q ss_pred ----------------------E-EEEEecCC-CEEEEEcCC----------------CcEEEEeCCCCccc-------c
Q 014590 236 ----------------------V-TSLSLSED-QLIISGSSL----------------GSIAISGLSSDQRL-------T 268 (422)
Q Consensus 236 ----------------------v-~~l~~~~~-~~l~s~~~d----------------g~i~iwd~~~~~~~-------~ 268 (422)
+ ...++.+. +.++.++.+ +.|..+|..+|+.+ .
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 12344444 677777655 37999999999876 0
Q ss_pred ---------ceEeEEEe-cCC---CEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 269 ---------GIKTLCYN-PCS---RLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 269 ---------~v~~~~~~-~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
...-+... .+| ..++.++.+|.++++|..+|+.+....
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 01112222 467 567788999999999999999887654
No 234
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.21 E-value=3.3e-08 Score=88.44 Aligned_cols=189 Identities=11% Similarity=0.022 Sum_probs=121.8
Q ss_pred eeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeec-
Q 014590 155 SLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM- 231 (422)
Q Consensus 155 ~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~- 231 (422)
....|++++..++ ...++.|..||..+++........ ....+.+...+..++ ++.+ .|.+||..+++.......
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-~v~~i~~~~dg~l~v-~~~~-gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPF-MGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS-CEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEECSS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC-cceEEEEeCCCeEEE-EECC-CEEEEECCCCcEEEEeeCC
Confidence 4467888866655 456789999999887643222222 334455555555444 4444 599999988875433221
Q ss_pred ---CCccEEEEEecCC-CEEEEEcC------CCcEEEEeCCCCccc------cceEeEEEecCCCEEEEE-eCCCeEEEE
Q 014590 232 ---HCAPVTSLSLSED-QLIISGSS------LGSIAISGLSSDQRL------TGIKTLCYNPCSRLVFAG-TTAGYASCW 294 (422)
Q Consensus 232 ---~~~~v~~l~~~~~-~~l~s~~~------dg~i~iwd~~~~~~~------~~v~~~~~~~~~~~l~~g-~~dg~i~iw 294 (422)
....+++++++|+ +++++... .+.|..++ +++.. .....++|+|+++.++.+ +.++.|.+|
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~ 206 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 206 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEE
Confidence 1235889999987 54443322 24566666 44432 456789999999877655 457889999
Q ss_pred ECC--CC-ee-----eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 295 DLR--TM-KS-----LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 295 d~~--~~-~~-----~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
|+. ++ +. +..+.........++ ++++|.+.++...++.|.+||. +++.+..+..
T Consensus 207 d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~ 268 (326)
T 2ghs_A 207 PLDARTGLPTGKAEVFIDSTGIKGGMDGSV-CDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV 268 (326)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSSSEEEEEE-ECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred EcccccCCcccCceEEEECCCCCCCCCeeE-ECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC
Confidence 986 55 32 222333345677888 8999987777766788999998 5777666644
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.20 E-value=8.8e-10 Score=98.77 Aligned_cols=246 Identities=12% Similarity=0.069 Sum_probs=155.2
Q ss_pred eeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEEEecCCeEEEEECCCCcee
Q 014590 108 WKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIVGLIGTRICIWRRNGLRSV 185 (422)
Q Consensus 108 l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~ 185 (422)
+..+...+.++.. ++|.+..++.+ +..+|. +++.+..+..+... ....+. ++...+++.++.+..+|.. ++..
T Consensus 55 ~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~ 129 (330)
T 3hxj_A 55 FKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEK 129 (330)
T ss_dssp SCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TTEEEEECTTSEEEEECTT-SCEE
T ss_pred EecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEE
Confidence 3334445566666 46666666655 888886 56555444433222 123333 5555558889999999988 5544
Q ss_pred eecC-CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCC
Q 014590 186 FPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (422)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~ 264 (422)
.... ............ +..++.++.++.|..+|.. ++....+......+.++...+++.+..++ +.+..+| .++
T Consensus 130 ~~~~~~~~~~~~~~~~~-~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 130 WRFKTKKAIYATPIVSE-DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDG 204 (330)
T ss_dssp EEEECSSCCCSCCEECT-TSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTS
T ss_pred EEEcCCCceeeeeEEcC-CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCC
Confidence 3222 222222222221 3448888888999999998 88777776555666777776665566666 8899999 666
Q ss_pred ccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 265 QRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 265 ~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
+.. ..+.++...++|. +.+++.++.|..+|. +++.+..+......+.++. ..+++ .|..++.+|.|..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~-~~~~g-~l~v~t~~ggl~~~ 280 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPV-IGNTD-TIYFGSYDGHLYAI 280 (330)
T ss_dssp CEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCE-ECTTS-CEEEECTTCEEEEE
T ss_pred cEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccce-EcCCC-eEEEecCCCCEEEE
Confidence 554 4577788877775 556677788988884 5666666665544455555 55455 56778888889999
Q ss_pred ECCCCceEEEeeecCCcccccCCCCCCeEEe
Q 014590 338 DQNTGEVLSRCVMDIGSASSSSNKVSGVIER 368 (422)
Q Consensus 338 d~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~ 368 (422)
|. +++.+..+......+..+....+|.+++
T Consensus 281 d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~ 310 (330)
T 3hxj_A 281 NP-DGTEKWNFETGSWIIATPVIDENGTIYF 310 (330)
T ss_dssp CT-TSCEEEEEECSSCCCSCCEECTTCCEEE
T ss_pred CC-CCcEEEEEEcCCccccceEEcCCCEEEE
Confidence 96 6887777665444343344445666654
No 236
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.19 E-value=4.3e-08 Score=94.42 Aligned_cols=231 Identities=14% Similarity=0.077 Sum_probs=153.7
Q ss_pred EEecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCC-----ceeeEEEecCCCeEEEec------CCeEEEEECCCCceee
Q 014590 118 CRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN-----AASLVDFDFDESKIVGLI------GTRICIWRRNGLRSVF 186 (422)
Q Consensus 118 v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~------~~~i~~w~~~~~~~~~ 186 (422)
+++.++.++.++.|+.+..+|..+|+.+..+.... .........++..++++. ++.|..+|..+++.+.
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 34456788888899999999999999998876543 111111112454455554 7899999999988764
Q ss_pred ecCCCcee---------------------------------------eeEEEeeeCCeEEEecCC---------------
Q 014590 187 PSREGTFM---------------------------------------KGLCMRYFDPEAVVGCED--------------- 212 (422)
Q Consensus 187 ~~~~~~~~---------------------------------------~~~~~~~~~~~l~~~~~d--------------- 212 (422)
........ ...++......++.+..+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 33221100 012223333445555432
Q ss_pred -CeEEEEeCCCcceeeeeecC----------CccEEEEEec-CC---CEEEEEcCCCcEEEEeCCCCccc-----cc-e-
Q 014590 213 -GTARVFDMYSRKCSQIIRMH----------CAPVTSLSLS-ED---QLIISGSSLGSIAISGLSSDQRL-----TG-I- 270 (422)
Q Consensus 213 -~~i~iwd~~~~~~~~~~~~~----------~~~v~~l~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~-v- 270 (422)
+.|..+|..+|+.+..++.. ..++. +... .+ ..++.++.+|.+.++|..+|+.+ .. +
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 36999999999998887532 12222 1211 23 25677889999999999998876 11 1
Q ss_pred ---------------------------------------EeEEEecCCCEEEEEe-------------------------
Q 014590 271 ---------------------------------------KTLCYNPCSRLVFAGT------------------------- 286 (422)
Q Consensus 271 ---------------------------------------~~~~~~~~~~~l~~g~------------------------- 286 (422)
..++++|+...+++..
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 2357888877777654
Q ss_pred ------------CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeec
Q 014590 287 ------------TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMD 351 (422)
Q Consensus 287 ------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 351 (422)
.+|.|..||+.+++.+.++.... .+.+.. +...+..++.++.||.|+.+|.++|+.+.++...
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~-~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGT-LYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBC-EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-Ccccee-EEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 34789999999999988876432 233333 3345677888999999999999999999988754
No 237
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.17 E-value=8.2e-08 Score=92.53 Aligned_cols=186 Identities=12% Similarity=0.063 Sum_probs=118.2
Q ss_pred ecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCce----------eeEEEecCCCeEEEecCCeEEEEECCCCceeeecC
Q 014590 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA----------SLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSR 189 (422)
Q Consensus 120 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~ 189 (422)
..++.++.++.++.|.-+|..+|+.+..+...... ...++ .++..++++.++.+..+|.++++.+....
T Consensus 66 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 66 VSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred EECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 35776766776555999999999999888764321 11222 24444458889999999999998765432
Q ss_pred CCc------eeeeEEEeeeC----C-eEEEecC------CCeEEEEeCCCcceeeeeecCCccE----------------
Q 014590 190 EGT------FMKGLCMRYFD----P-EAVVGCE------DGTARVFDMYSRKCSQIIRMHCAPV---------------- 236 (422)
Q Consensus 190 ~~~------~~~~~~~~~~~----~-~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~v---------------- 236 (422)
... ....-.+ ..+ . .+++++. ++.|..+|.++|+.+.........+
T Consensus 145 ~~~~~~~~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 145 FADHGAGYTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp CSCGGGTCBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred CCCCCcCcccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 211 1111111 122 1 4666553 7899999999999887654311000
Q ss_pred -------------------------EEEEecCC-CEEEEEcC--------------------C----CcEEEEeCCCCcc
Q 014590 237 -------------------------TSLSLSED-QLIISGSS--------------------L----GSIAISGLSSDQR 266 (422)
Q Consensus 237 -------------------------~~l~~~~~-~~l~s~~~--------------------d----g~i~iwd~~~~~~ 266 (422)
...+++|. +.++.++. | +.|..+|..+|+.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 12344444 66665542 2 5899999999988
Q ss_pred c-------c------ceEe-EEEe---cCCC---EEEEEeCCCeEEEEECCCCeeeeeecc
Q 014590 267 L-------T------GIKT-LCYN---PCSR---LVFAGTTAGYASCWDLRTMKSLWETRI 307 (422)
Q Consensus 267 ~-------~------~v~~-~~~~---~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~~ 307 (422)
+ . .+.. +.+. .+|+ .++.++.+|.++++|..+|+.+.....
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 7 0 1111 2222 4674 788899999999999999998876544
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=2.8e-08 Score=83.80 Aligned_cols=181 Identities=12% Similarity=0.086 Sum_probs=130.7
Q ss_pred eeEEeeccccce--eEEEecCC-eEEEEecCC--eEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEE
Q 014590 104 DIDQWKAHSVGV--DQCRMKRG-LILTGVGDK--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~~v--~~v~~~~~-~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~ 176 (422)
.++++ .|...- ..+.|.++ ++.+.+.+| .|+++|+++++.+..+..+.......+.++++.+. ...++.+.+
T Consensus 33 vv~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 34455 455443 67888877 666666666 89999999999999998876655555666777776 455899999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC--C---ccEEEEEecCCCEEEEEc
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--C---APVTSLSLSEDQLIISGS 251 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~---~~v~~l~~~~~~~l~s~~ 251 (422)
+|.++.+.+-....+. ....+.+++..|+.+..++.|.++|..+.+.+..+... . ..++.+.+..+...+..-
T Consensus 112 ~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w 189 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVW 189 (262)
T ss_dssp EETTTCCEEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred EECccCcEEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEc
Confidence 9999988653322222 23455567777777777889999999999888776542 1 335567776555555555
Q ss_pred CCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeC
Q 014590 252 SLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTT 287 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~ 287 (422)
.+..|.+.|..+++.+ ...+.+|++|+++.|++.+.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7889999999998876 13478999998887777764
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=2e-08 Score=99.50 Aligned_cols=189 Identities=11% Similarity=0.100 Sum_probs=122.2
Q ss_pred eeEEEecCCCeEE-Ee-cC----CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCC-------------eE
Q 014590 155 SLVDFDFDESKIV-GL-IG----TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG-------------TA 215 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~~-~~----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------------~i 215 (422)
..++|||||+.++ +. .. ..|+++|+++++.+.....+......+|+ +++.|+.++.+. .|
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 3478999999988 32 22 46999999998854332222212456788 888888877764 39
Q ss_pred EEEeCCCcce--eeee--ec-CCccEEEEEecCC-CEEEE-Ec---CCCcEEEEeCCCCc--cc------cceEeEEEec
Q 014590 216 RVFDMYSRKC--SQII--RM-HCAPVTSLSLSED-QLIIS-GS---SLGSIAISGLSSDQ--RL------TGIKTLCYNP 277 (422)
Q Consensus 216 ~iwd~~~~~~--~~~~--~~-~~~~v~~l~~~~~-~~l~s-~~---~dg~i~iwd~~~~~--~~------~~v~~~~~~~ 277 (422)
++|++.++.. ...+ .. |...+..+.++|+ ++++. .+ .+..|.++|+.++. .. ...... +++
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 9999877642 2222 33 4455788999987 55543 32 23589999997763 22 233333 567
Q ss_pred CCCEEEEEeC----CCeEEEEECCCCee--eeeeccCCCceeeeeeEecCCCEEEEEec-CC--eEEEEECCCCceEEEe
Q 014590 278 CSRLVFAGTT----AGYASCWDLRTMKS--LWETRISPNVVYSLQHLQNDTSTLVVGGI-DG--VLRVLDQNTGEVLSRC 348 (422)
Q Consensus 278 ~~~~l~~g~~----dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~s~~~~~l~s~~~-dg--~v~vwd~~~~~~~~~~ 348 (422)
+|..|+..+. .+.|..+|+.++.. ...+..|...+. . +++++++|+.... ++ .|++||+. +.....+
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~-~s~~g~~lv~~~~~~g~~~l~~~d~~-g~~~~~l 365 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T-VHSGSGYLFAEYMVDATARVEQFDYE-GKRVREV 365 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E-EEEETTEEEEEEEETTEEEEEEECTT-SCEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E-EEEECCEEEEEEEECCeeEEEEEECC-CCeeEEe
Confidence 7766655543 36799999987654 345556665554 5 8899988776665 44 68899987 4444554
Q ss_pred e
Q 014590 349 V 349 (422)
Q Consensus 349 ~ 349 (422)
.
T Consensus 366 ~ 366 (693)
T 3iuj_A 366 A 366 (693)
T ss_dssp C
T ss_pred e
Confidence 3
No 240
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=99.12 E-value=3.3e-11 Score=101.64 Aligned_cols=52 Identities=21% Similarity=0.250 Sum_probs=49.0
Q ss_pred CccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhc
Q 014590 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH 72 (422)
Q Consensus 21 ~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~ 72 (422)
|.+|..||.|++++||+||+|+||+++++|||+|+.+++|+.+||.++.+..
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 4579999999999999999999999999999999999999999999998754
No 241
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.11 E-value=3.5e-07 Score=88.11 Aligned_cols=225 Identities=14% Similarity=0.113 Sum_probs=149.2
Q ss_pred EEEEecCCeEEEEEcCCCeEEEeeeCCC-----ceeeEEEecCCCeEEEe------cCCeEEEEECCCCceeeecCCCce
Q 014590 125 ILTGVGDKVMRLWSLEGYKCVEEYSLPN-----AASLVDFDFDESKIVGL------IGTRICIWRRNGLRSVFPSREGTF 193 (422)
Q Consensus 125 l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~------~~~~i~~w~~~~~~~~~~~~~~~~ 193 (422)
++.++.|+.+..+|..+|+.+....... .....-.-.++..++++ .++.|..+|.++++.+........
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999999999998876543 11111111245555544 378999999999987644332211
Q ss_pred e---------------------------------------eeEEEeeeCCeEEEecCC----------------CeEEEE
Q 014590 194 M---------------------------------------KGLCMRYFDPEAVVGCED----------------GTARVF 218 (422)
Q Consensus 194 ~---------------------------------------~~~~~~~~~~~l~~~~~d----------------~~i~iw 218 (422)
. ...++......++.+..+ +.|..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 0 012233344456666554 489999
Q ss_pred eCCCcceeeeeecCC----------ccEEEEEec--CC---CEEEEEcCCCcEEEEeCCCCccc-----cc-e-------
Q 014590 219 DMYSRKCSQIIRMHC----------APVTSLSLS--ED---QLIISGSSLGSIAISGLSSDQRL-----TG-I------- 270 (422)
Q Consensus 219 d~~~~~~~~~~~~~~----------~~v~~l~~~--~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~-v------- 270 (422)
|..+|+.+..++... .++. +... .+ ..++.++.+|.+.++|.++|+.+ .. +
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~ 362 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD 362 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred eCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccc
Confidence 999999988776422 1222 2221 23 35777889999999999998876 11 0
Q ss_pred ---------------------------------EeEEEecCCCEEEEEe-------------------------------
Q 014590 271 ---------------------------------KTLCYNPCSRLVFAGT------------------------------- 286 (422)
Q Consensus 271 ---------------------------------~~~~~~~~~~~l~~g~------------------------------- 286 (422)
..++++|+..++++..
T Consensus 363 ~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p 442 (599)
T 1w6s_A 363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGP 442 (599)
T ss_dssp TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred cCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCC
Confidence 1356777766665531
Q ss_pred --------CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 287 --------TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 287 --------~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
.+|.|..||+.+++.+.+..... +..+-. ....+..++.++.||.++.||.++|+.+.++....
T Consensus 443 ~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~-~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 443 KGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGT-MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp TSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBC-EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcc-eEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 34789999999999988775322 222211 23456778889999999999999999999886543
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=8.8e-08 Score=84.78 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=122.6
Q ss_pred CceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeee
Q 014590 152 NAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII 229 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 229 (422)
.......|+++++.|+ ...++.|..|+..+....+....+ ....+++...+..+++...++.|..|+.. ++.....
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~-~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATA-FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCS-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCC-ccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEE
Confidence 3445688999999554 556789999998544334433333 33455666666645555556889999985 5533222
Q ss_pred ecC----CccEEEEEecCC-CEEEE----EcC-------------CCcEEEEeCCCCccc-----cceEeEEEecCCCEE
Q 014590 230 RMH----CAPVTSLSLSED-QLIIS----GSS-------------LGSIAISGLSSDQRL-----TGIKTLCYNPCSRLV 282 (422)
Q Consensus 230 ~~~----~~~v~~l~~~~~-~~l~s----~~~-------------dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l 282 (422)
... ...++.++++++ ++.++ |.. .+.|..+|..+++.. .....++|+|+++.|
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEE
Confidence 111 124567899887 55554 332 256888887666543 456789999999988
Q ss_pred EEEeCC------CeEEEEECCCCeee--eee-ccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 283 FAGTTA------GYASCWDLRTMKSL--WET-RISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 283 ~~g~~d------g~i~iwd~~~~~~~--~~~-~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
+++... +.|.+|++..+... ..+ ....+....++ ++++|++. +++.+| |.+|+. .++.+..+..
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~-~d~~G~lw-v~~~~g-v~~~~~-~g~~~~~~~~ 275 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC-VDRGGWLW-SSSGTG-VCVFDS-DGQLLGHIPT 275 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE-ECTTSCEE-ECCSSE-EEEECT-TSCEEEEEEC
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE-ECCCCCEE-EecCCc-EEEECC-CCCEEEEEEC
Confidence 877665 78999998754311 111 11234456777 88999844 444454 999998 4777776643
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=1.3e-07 Score=92.91 Aligned_cols=232 Identities=12% Similarity=0.139 Sum_probs=156.9
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-----eeeEEEecCCCeEEEec------CCeEEEEECCCCceeee
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-----ASLVDFDFDESKIVGLI------GTRICIWRRNGLRSVFP 187 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~------~~~i~~w~~~~~~~~~~ 187 (422)
++.++.++.++.|+.|..+|..+|+.+..+..... ......-.++..+++.. ++.|..+|..+++.+..
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 44566888889999999999999999988876321 11111112444445433 58999999999987643
Q ss_pred cCC--Cc------------------------------eeeeEEEeeeCCeEEEecCCC-------------------eEE
Q 014590 188 SRE--GT------------------------------FMKGLCMRYFDPEAVVGCEDG-------------------TAR 216 (422)
Q Consensus 188 ~~~--~~------------------------------~~~~~~~~~~~~~l~~~~~d~-------------------~i~ 216 (422)
... +. .-...++.+....++.++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 321 00 000123333455677777665 499
Q ss_pred EEeCCCcceeeeeec--CC-------ccEEEEEec-CC---CEEEEEcCCCcEEEEeCCCCccc-----cc------e--
Q 014590 217 VFDMYSRKCSQIIRM--HC-------APVTSLSLS-ED---QLIISGSSLGSIAISGLSSDQRL-----TG------I-- 270 (422)
Q Consensus 217 iwd~~~~~~~~~~~~--~~-------~~v~~l~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~------v-- 270 (422)
.+|..+|+.+..++. |. .+.....+. .+ ..++.++.+|.++++|..+|+.+ .. +
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 999999999888764 22 222222222 23 26889999999999999998865 10 0
Q ss_pred ------------------------------EeEEEecCCCEEEEEe----------------------------------
Q 014590 271 ------------------------------KTLCYNPCSRLVFAGT---------------------------------- 286 (422)
Q Consensus 271 ------------------------------~~~~~~~~~~~l~~g~---------------------------------- 286 (422)
..++++|+...+++..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 1267788777666521
Q ss_pred --CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeeecC
Q 014590 287 --TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 287 --~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 352 (422)
.+|.|..||+.+++.+++...+.. ..... +...+.+++.++.||.++.||.++|+.+..+....
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~-~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPYPTH-WNGGT-LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEESSS-CCCCE-EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCccceEEEEeCCCCcEEEEccCCCC-CcCce-eEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 237899999999999988765432 33333 44678889999999999999999999999887653
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.09 E-value=1.3e-07 Score=79.07 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=130.6
Q ss_pred eeEEeecccc--ceeEEEecCC-eEEEEecC--CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEE
Q 014590 104 DIDQWKAHSV--GVDQCRMKRG-LILTGVGD--KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICI 176 (422)
Q Consensus 104 ~~~~l~~H~~--~v~~v~~~~~-~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~ 176 (422)
.++++ .|.. -...+.|.++ +..+.+.+ ..|+++|+++++.+..+..+....-..+.++++.|. ...++.+.+
T Consensus 11 v~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 34455 5654 3567999888 55666665 489999999999999998876665555666677776 566899999
Q ss_pred EECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC-----ccEEEEEecCCCEEEEEc
Q 014590 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-----APVTSLSLSEDQLIISGS 251 (422)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~~l~s~~ 251 (422)
+|.++.+.+-....+. ....+..++..|+.+..++.|.++|.++.+.+..+.... ..++.+.+..+..++...
T Consensus 90 ~D~~tl~~~~ti~~~~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw 167 (243)
T 3mbr_X 90 YDLATLTPRARFRYPG--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVW 167 (243)
T ss_dssp EETTTTEEEEEEECSS--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred EECCcCcEEEEEeCCC--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEEC
Confidence 9999988653322222 235556777777777778999999999998887775321 345677776556555555
Q ss_pred CCCcEEEEeCCCCccc--------------------cceEeEEEecCCCEEEEEeC
Q 014590 252 SLGSIAISGLSSDQRL--------------------TGIKTLCYNPCSRLVFAGTT 287 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~--------------------~~v~~~~~~~~~~~l~~g~~ 287 (422)
.+..|.+.|..+++.+ ...+.+|++|+++.|++.+.
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6789999999998876 14578999998777666653
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.08 E-value=1.7e-07 Score=79.99 Aligned_cols=194 Identities=9% Similarity=-0.001 Sum_probs=136.0
Q ss_pred eeEEeeccccc--eeEEEec-CCeEEEE-ec--CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEE
Q 014590 104 DIDQWKAHSVG--VDQCRMK-RGLILTG-VG--DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRIC 175 (422)
Q Consensus 104 ~~~~l~~H~~~--v~~v~~~-~~~l~s~-~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~ 175 (422)
.+.++ .|... ...+.|. ++.|+.+ +. ++.|++.|+.+++.+..+..+.......+.++++.+. ...++.+.
T Consensus 11 vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 11 VLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEE
T ss_pred EEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEE
Confidence 44555 35543 5789995 4744433 32 5899999999999999987655444445555677766 45689999
Q ss_pred EEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCC-----ccEEEEEecCCCEEEEE
Q 014590 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-----APVTSLSLSEDQLIISG 250 (422)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~~l~s~ 250 (422)
++|..+.+.+-....+ ......+.+++..++++..++.|.++|..+.+.+..+..-. ..++.+.+..+..++..
T Consensus 90 viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp EEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEec
Confidence 9999988755333222 11235567778877777788999999999988877765321 23677888744455555
Q ss_pred cCCCcEEEEeCCCCccc-----c---------------ceEeEEEecCCCEEE-EEeCCCeEEEEECCCC
Q 014590 251 SSLGSIAISGLSSDQRL-----T---------------GIKTLCYNPCSRLVF-AGTTAGYASCWDLRTM 299 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~-----~---------------~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~ 299 (422)
..++.|.+.|..+++.+ . ....++++|+++.++ ++...+.+...++...
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 56889999999999876 1 347999999987555 4557788988887654
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=7.7e-08 Score=81.06 Aligned_cols=179 Identities=10% Similarity=0.061 Sum_probs=128.4
Q ss_pred eeEEeeccccc--eeEEEecCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEE
Q 014590 104 DIDQWKAHSVG--VDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWR 178 (422)
Q Consensus 104 ~~~~l~~H~~~--v~~v~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~ 178 (422)
.++++ .|... ...+.|.++ +.++.+.+|.|+++|+++++.+..+ .+.......+.++++.|. ...++.+.++|
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 34455 45443 367888877 7778888899999999999998888 554444444566666666 55689999999
Q ss_pred CCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecC--C---ccEEEEEecCCCEEEEEcCC
Q 014590 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--C---APVTSLSLSEDQLIISGSSL 253 (422)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~---~~v~~l~~~~~~~l~s~~~d 253 (422)
.++.+.+-....... ...+.+++..|+.+..++.|.++|.++.+.+..+... . ..++.+.+..+..++....+
T Consensus 123 ~~Tl~~~~ti~~~~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s 200 (268)
T 3nok_A 123 GMPPQRERTTRYSGE--GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHS 200 (268)
T ss_dssp TTTTEEEEEEECSSC--CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTC
T ss_pred CCcCcEEEEEeCCCc--eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCC
Confidence 999886533222222 3455577888877777999999999999988777532 2 24567788755655555578
Q ss_pred CcEEEEeCCCCccc--------------------cceEeEEEecCCCEEEEEe
Q 014590 254 GSIAISGLSSDQRL--------------------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 254 g~i~iwd~~~~~~~--------------------~~v~~~~~~~~~~~l~~g~ 286 (422)
..|.+.|..+++.+ ...+.+|++|+++.|++.+
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 89999999999876 1457899999776555554
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.01 E-value=6.5e-06 Score=82.93 Aligned_cols=297 Identities=10% Similarity=0.049 Sum_probs=177.6
Q ss_pred eeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeC--CCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCC-
Q 014590 115 VDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL--PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSRE- 190 (422)
Q Consensus 115 v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~- 190 (422)
|.++.. +++.+..|..++.+..|+..+++....... ...+..+....++...+++.++.+..||..+.+.......
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~ 254 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSP 254 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCT
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCC
Confidence 777777 467666677666688999887765433221 2234446666777777787776799999887653322111
Q ss_pred -----CceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeeee-------cCCccEEEEEecCCCEEEEEcCCCcEE
Q 014590 191 -----GTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIR-------MHCAPVTSLSLSEDQLIISGSSLGSIA 257 (422)
Q Consensus 191 -----~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~l~~~~~~~l~s~~~dg~i~ 257 (422)
-....+.++..+. ..+..|+.+ -|.+||..+++...... .....|.++...+++.+..|+.++-|.
T Consensus 255 ~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~ 333 (795)
T 4a2l_A 255 SNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLN 333 (795)
T ss_dssp TCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEE
T ss_pred CCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeE
Confidence 0112244444443 337777766 58889987765433221 123579999988777788888888898
Q ss_pred EEeCCCCccc-------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec--------cCCCceeeee
Q 014590 258 ISGLSSDQRL-------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR--------ISPNVVYSLQ 316 (422)
Q Consensus 258 iwd~~~~~~~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------~~~~~v~~l~ 316 (422)
.++..++... ..|.++...++|+ |.+|+.++-|..||..+++...-.. .....|.++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE
T ss_pred EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE
Confidence 8886543221 5688998888876 5557777669999988664332111 1235688887
Q ss_pred eEecCCCEEEEEecCCeEEEEECCCCceEEEeee-----cCCcccccCCCCCCeEEeeeccc---c-CCCcccccCC---
Q 014590 317 HLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM-----DIGSASSSSNKVSGVIERNEGRR---L-SAGCCIDRIP--- 384 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~s~d~~i~~~~~~~---~-~~~~~~~~~~--- 384 (422)
.+++++.|..|+.++-|..||..+++... +.. ....+..+.-..+|.+++.+..- + +.........
T Consensus 413 -~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 413 -VDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp -EETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCT
T ss_pred -EcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccc
Confidence 78888856677777779999988765432 221 12223334444566665443211 1 0111111111
Q ss_pred ---CCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccC
Q 014590 385 ---KTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 385 ---~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.-....|.++..| +...+ |+.+ -|..|+...
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~ 526 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWI-GGEE-GLSVFKQEG 526 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEE-EESS-CEEEEEEET
T ss_pred cccccCCceEEEEEECCCCCEEE-EeCC-ceEEEeCCC
Confidence 1123578888884 44444 4444 477777643
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=6e-08 Score=91.27 Aligned_cols=240 Identities=7% Similarity=0.006 Sum_probs=163.7
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeC----------------------------------C------CceeeEEEec--
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSL----------------------------------P------NAASLVDFDF-- 161 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~----------------------------------~------~~~~~~~~~~-- 161 (422)
-+.||+..|.++|+-+.+++.++.+.. . ......++|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 477888999999999988887766431 0 0112255665
Q ss_pred ---CCCeEE--EecCCeEEEEECCCCcee--eecCCCceeeeEEE-e-eeCCeEEEec------------------CCCe
Q 014590 162 ---DESKIV--GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCM-R-YFDPEAVVGC------------------EDGT 214 (422)
Q Consensus 162 ---~~~~l~--~~~~~~i~~w~~~~~~~~--~~~~~~~~~~~~~~-~-~~~~~l~~~~------------------~d~~ 214 (422)
||+++. ...++.|.+.|+++.+.. +....+.....+++ . +++.++++++ .++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 888887 334677999999998743 34444444455565 3 5667766663 3568
Q ss_pred EEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcCCC--------------------------------------c
Q 014590 215 ARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG--------------------------------------S 255 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~dg--------------------------------------~ 255 (422)
+.+.|.++.+...++..-. ....++++|+ +++++++.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999998888776322 3355667776 6666665432 5
Q ss_pred EEEEeCCC--Ccc-c------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCe------------eeeeeccCCCcee
Q 014590 256 IAISGLSS--DQR-L------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMK------------SLWETRISPNVVY 313 (422)
Q Consensus 256 i~iwd~~~--~~~-~------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~------------~~~~~~~~~~~v~ 313 (422)
|.+.|.++ ++. + ....++.++|||+++++++ .+.+|.++|+.+.+ .+.+.... ....
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcc
Confidence 88889887 444 2 5678899999999888776 57889999999653 23333333 3467
Q ss_pred eeeeEecCCCEEEEEecCCeEEEEECCC----------CceEEEeeecCCc-----ccccCCCCCCeE
Q 014590 314 SLQHLQNDTSTLVVGGIDGVLRVLDQNT----------GEVLSRCVMDIGS-----ASSSSNKVSGVI 366 (422)
Q Consensus 314 ~l~~~s~~~~~l~s~~~dg~v~vwd~~~----------~~~~~~~~~~~~~-----~~~~~~s~d~~i 366 (422)
.++ |+++|...++.-.|++|.+||+.+ .+.+.++..|... ....+.++||.-
T Consensus 335 h~a-F~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 335 HTA-FDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW 401 (595)
T ss_dssp EEE-ECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE
T ss_pred eEE-ECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCE
Confidence 788 999994445566799999999976 5667777766542 133455666644
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.96 E-value=3.4e-07 Score=88.23 Aligned_cols=231 Identities=13% Similarity=0.113 Sum_probs=149.8
Q ss_pred EecCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCc-----ee-eEEEec---CCC-eEE-Ee------cCCeEEEEECCC
Q 014590 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-----AS-LVDFDF---DES-KIV-GL------IGTRICIWRRNG 181 (422)
Q Consensus 119 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~-~~~~~~---~~~-~l~-~~------~~~~i~~w~~~~ 181 (422)
++.++.++.++.|+.+.-+|.++|+.+..+..... .. .-.+.. +++ .++ ++ .++.|..+|..+
T Consensus 114 a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 114 AIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 44566888889999999999999999988765431 11 111111 222 344 33 278999999999
Q ss_pred CceeeecCCCcee------------------------------------------eeEEEeeeCCeEEEecC--------
Q 014590 182 LRSVFPSREGTFM------------------------------------------KGLCMRYFDPEAVVGCE-------- 211 (422)
Q Consensus 182 ~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~l~~~~~-------- 211 (422)
++.++........ ...++.+....++.+..
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 8876543321100 01122223344554442
Q ss_pred ------------C----CeEEEEeCCCcceeeeeec--CC--------ccEEEEEec--CC---CEEEEEcCCCcEEEEe
Q 014590 212 ------------D----GTARVFDMYSRKCSQIIRM--HC--------APVTSLSLS--ED---QLIISGSSLGSIAISG 260 (422)
Q Consensus 212 ------------d----~~i~iwd~~~~~~~~~~~~--~~--------~~v~~l~~~--~~---~~l~s~~~dg~i~iwd 260 (422)
| +.|..+|..+|+.+..++. |. .++. +... .+ ..++.++.+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 6899999999999888753 21 2222 2221 23 3688899999999999
Q ss_pred CCCCccc-----cc-e----------------------------------------------EeEEEecCCCEEEEEe--
Q 014590 261 LSSDQRL-----TG-I----------------------------------------------KTLCYNPCSRLVFAGT-- 286 (422)
Q Consensus 261 ~~~~~~~-----~~-v----------------------------------------------~~~~~~~~~~~l~~g~-- 286 (422)
..+|+.+ .. + ..++++|+...+++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 9998876 11 1 1345666555555432
Q ss_pred -------------------------------CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEE
Q 014590 287 -------------------------------TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLR 335 (422)
Q Consensus 287 -------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~ 335 (422)
.+|.|..||+.+++.+.+..... .+..-. ....+.+++.|+.||.++
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~-~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGV-LATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCC-EEETTTEEEEECTTSEEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccc-eEeCCCEEEEECCCCcEE
Confidence 25789999999999988876543 222222 234567888899999999
Q ss_pred EEECCCCceEEEeeecC
Q 014590 336 VLDQNTGEVLSRCVMDI 352 (422)
Q Consensus 336 vwd~~~~~~~~~~~~~~ 352 (422)
.||.++|+.+.++....
T Consensus 511 A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGS 527 (582)
T ss_dssp EEETTTCCEEEEEECSS
T ss_pred EEECCCCCEEEEecCCC
Confidence 99999999999987643
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=1.1e-06 Score=75.00 Aligned_cols=198 Identities=7% Similarity=-0.033 Sum_probs=132.3
Q ss_pred CeEEEeeeCCCce--eeEEEecCCCeEEEec---CCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCeE
Q 014590 142 YKCVEEYSLPNAA--SLVDFDFDESKIVGLI---GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTA 215 (422)
Q Consensus 142 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~---~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i 215 (422)
.+.+.++...... .-++|++++..++++. ++.|.++|+.+++.+....-+.......+...+..+ ++.-.++.+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence 4667777765433 4589998864444543 589999999998855332211111123344456664 445567899
Q ss_pred EEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEE
Q 014590 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 216 ~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~ 283 (422)
.++|..+.+.+.++......-..++. .++.++++..++.|.++|..+.+.. ..++.+.|. +|...+
T Consensus 89 ~viD~~t~~v~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyv 166 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWA 166 (266)
T ss_dssp EEEETTTTEEEEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECCCCcEEEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEE
Confidence 99999999988888633122234554 3344445556889999999887765 135677887 675555
Q ss_pred EEeCCCeEEEEECCCCeeeeeeccC-------------CCceeeeeeEecCCCE-EEEEecCCeEEEEECCCC
Q 014590 284 AGTTAGYASCWDLRTMKSLWETRIS-------------PNVVYSLQHLQNDTST-LVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 284 ~g~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~s~~~~~-l~s~~~dg~v~vwd~~~~ 342 (422)
....++.|.+.|..+++.+..+... ....+.++ ++|+++. ++++...+.|.+.++...
T Consensus 167 n~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa-~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIA-WDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEE-EETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEE-EcCCCCEEEEECCCCCeEEEEEEecc
Confidence 5546789999999999988777532 13568999 9999875 555667888988887643
No 251
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.94 E-value=7.5e-07 Score=81.04 Aligned_cols=204 Identities=10% Similarity=0.040 Sum_probs=134.0
Q ss_pred eEEEEecCCeEEEEEcCCC----eEEEeee-------CC-CceeeEEEecCCCeEE-EecC------CeEEEEECCCCce
Q 014590 124 LILTGVGDKVMRLWSLEGY----KCVEEYS-------LP-NAASLVDFDFDESKIV-GLIG------TRICIWRRNGLRS 184 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~~-~~~~~~~~~~~~~~l~-~~~~------~~i~~w~~~~~~~ 184 (422)
++++|..++.|.++|+.+. +..++++ .. .....+...|+| .++ +..+ +.|.++|.++.+.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 6667778899999999765 6777773 11 123447888999 555 3333 7899999998875
Q ss_pred eeecCC--C--ceeeeEEEeeeCCeEEEec-------------------CCCeEEEEeCCCcceeeeeecC-C-ccEEEE
Q 014590 185 VFPSRE--G--TFMKGLCMRYFDPEAVVGC-------------------EDGTARVFDMYSRKCSQIIRMH-C-APVTSL 239 (422)
Q Consensus 185 ~~~~~~--~--~~~~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~-~-~~v~~l 239 (422)
+-.... + .....+.+.+.++.+++.. .+.+|.+||+.+++.++++..- . .....+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 533221 1 1222345566677677764 3689999999998888877642 1 234456
Q ss_pred Ee--cCC-CEEEEEc------CCCcEEEEeCCCCccc---------------------------cceEeEEEecCCCEEE
Q 014590 240 SL--SED-QLIISGS------SLGSIAISGLSSDQRL---------------------------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 240 ~~--~~~-~~l~s~~------~dg~i~iwd~~~~~~~---------------------------~~v~~~~~~~~~~~l~ 283 (422)
.| +|+ +++++++ .+++|.+|....+... ..+..+.++|||++|.
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 55 777 5555554 5667765443222100 2367889999999999
Q ss_pred EEeC-CCeEEEEECCC---CeeeeeeccCC--------------CceeeeeeEecCCCEEEEEe
Q 014590 284 AGTT-AGYASCWDLRT---MKSLWETRISP--------------NVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 284 ~g~~-dg~i~iwd~~~---~~~~~~~~~~~--------------~~v~~l~~~s~~~~~l~s~~ 329 (422)
++.. .+.|.+||+.. .+.+..+.... +.-..++ ++|||++|+++.
T Consensus 337 VSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~-lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLE-ISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEE-ECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEE-EcCCCCEEEEEc
Confidence 8875 67899999852 34444443220 1246787 999999999887
No 252
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=1.6e-07 Score=84.57 Aligned_cols=213 Identities=9% Similarity=-0.055 Sum_probs=132.6
Q ss_pred ccccceeEEEec-CCeEEEEe-c-----CCeEEEEEcCCCeEEEeeeCCC-------ceeeEEEecCCCeEE-Ee----c
Q 014590 110 AHSVGVDQCRMK-RGLILTGV-G-----DKVMRLWSLEGYKCVEEYSLPN-------AASLVDFDFDESKIV-GL----I 170 (422)
Q Consensus 110 ~H~~~v~~v~~~-~~~l~s~~-~-----dg~v~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~-~~----~ 170 (422)
+|...+..+++. +|.|...+ . ++.|.+||+.+++.+..+..+. ....+++++++..++ +. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 466789999994 67444433 2 5799999999999887776532 234588998765554 43 5
Q ss_pred CCeEEEEECCCCceeeecCC--CceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEE
Q 014590 171 GTRICIWRRNGLRSVFPSRE--GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI 247 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l 247 (422)
++.|.+||+.+++....... ........+...+..+.+.+.++.+..|. ..+..++++|+ +.+
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWL 209 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEE
Confidence 78999999987763321111 11000011222233344455566554442 23578999987 577
Q ss_pred EEEcCCC-cEEEEeCC---CCc-----------cc---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc-C
Q 014590 248 ISGSSLG-SIAISGLS---SDQ-----------RL---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI-S 308 (422)
Q Consensus 248 ~s~~~dg-~i~iwd~~---~~~-----------~~---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~ 308 (422)
+.+..++ .+..++.. .+. .. .....++++++|+++++...++.|.+||..+++....... +
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~ 289 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK 289 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc
Confidence 7776555 55555431 111 00 3456799999999999998999999999855654322222 2
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
...+.+++ +.++++++++.+..+.+.+|
T Consensus 290 ~~~p~~va-~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 290 LSWTDSFN-FGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp GSCEEEEE-ECTTSCEEEEECCGGGSGGG
T ss_pred eecCCeeE-ECCCCcEEEEeCcccccccc
Confidence 34578898 88888877777655444333
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=1.2e-05 Score=80.88 Aligned_cols=295 Identities=11% Similarity=0.064 Sum_probs=177.2
Q ss_pred cceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeC--------CCceeeEEEecCCCeEEEecCCeEEEEECCCCc
Q 014590 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL--------PNAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (422)
Q Consensus 113 ~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~ 183 (422)
..|.++.. ++|.|..|..+ -|.+||..+++....... ...+..+....+|...+++.++.|..++..+..
T Consensus 263 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp SBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGS
T ss_pred CeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCccc
Confidence 56888877 46666666665 588999888765443221 123455777778888889988999999876554
Q ss_pred ee-eecCC---C-ceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeeeec--------CCccEEEEEecCCCE-EE
Q 014590 184 SV-FPSRE---G-TFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRM--------HCAPVTSLSLSEDQL-II 248 (422)
Q Consensus 184 ~~-~~~~~---~-~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~v~~l~~~~~~~-l~ 248 (422)
.. +.... + ....+.++..+.. .|..|+.++-|..||..+++....... ....|.++...+++. +.
T Consensus 342 ~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lW 421 (795)
T 4a2l_A 342 FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVY 421 (795)
T ss_dssp SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEE
T ss_pred ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEE
Confidence 22 11110 0 1122455555443 488888888899999877654332211 235788998876655 88
Q ss_pred EEcCCCcEEEEeCCCCccc-----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec------cCCCc
Q 014590 249 SGSSLGSIAISGLSSDQRL-----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR------ISPNV 311 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~-----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~~~~~ 311 (422)
.|+.++-|..+|..+++.. ..|.++...++|++.+ |+.+| +.+||..+++...... .....
T Consensus 422 igt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 422 IGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESSC-EEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred EEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecCc-eeEEeCCCCeEEEccccccccccCCce
Confidence 8888788999998766432 4688888888887555 44455 8899988765432211 12356
Q ss_pred eeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee-------cCCcccccCCCCCCeEEeeecc---ccC-CCccc
Q 014590 312 VYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM-------DIGSASSSSNKVSGVIERNEGR---RLS-AGCCI 380 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~s~d~~i~~~~~~---~~~-~~~~~ 380 (422)
|.++. .+++|...+.. .+| +..||..+++. .+.. ....+..+.-..+|.+++.+.. .+. ....+
T Consensus 500 i~~i~-~d~~g~lWigt-~~G-l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 500 ITTLF-RDSHKRLWIGG-EEG-LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQI 574 (795)
T ss_dssp EEEEE-ECTTCCEEEEE-SSC-EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEETTTTEE
T ss_pred EEEEE-ECCCCCEEEEe-CCc-eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECCCCCcE
Confidence 88887 88888765544 444 88899876654 3321 1122333444566777654321 111 11111
Q ss_pred ccCC---CCCCCCeEEEEec--CEEEEEEeCCCeEEEEEccC
Q 014590 381 DRIP---KTIRPPITCLAVG--MKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 381 ~~~~---~~h~~~v~~i~~~--~~~l~s~s~Dg~i~iW~~~~ 417 (422)
..+. .-....|.++..| |.+.+++ .. -|..|+.+.
T Consensus 575 ~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~-Gl~~~~~~~ 614 (795)
T 4a2l_A 575 KRYNTTNGLPNNVVYGILEDSFGRLWLST-NR-GISCFNPET 614 (795)
T ss_dssp EEECGGGTCSCSCEEEEEECTTSCEEEEE-TT-EEEEEETTT
T ss_pred EEeCCCCCCchhheEEEEECCCCCEEEEc-CC-ceEEEcCCC
Confidence 1111 1123468888884 5555544 44 466666543
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=1.7e-06 Score=72.86 Aligned_cols=183 Identities=12% Similarity=0.037 Sum_probs=120.9
Q ss_pred eEEEeeeCCCce--eeEEEecCCCeEE-EecCC--eEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEe-cCCCeEE
Q 014590 143 KCVEEYSLPNAA--SLVDFDFDESKIV-GLIGT--RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVG-CEDGTAR 216 (422)
Q Consensus 143 ~~~~~~~~~~~~--~~~~~~~~~~~l~-~~~~~--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~ 216 (422)
+.+.++.+.... .-+.|+ ++..+. ++.+| .|+.+|+++++.+.....+.......+...++.++.. ..++.+.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 566777665444 337777 553333 44444 8999999999865333222222233345556665444 4588999
Q ss_pred EEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEE
Q 014590 217 VFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 217 iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~ 284 (422)
++|..+.+.+.++...... ..++. +++.++.+..++.|.++|..+.+.+ ..++.+.+. +|...+.
T Consensus 111 v~D~~t~~~~~ti~~~~eG-~glt~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan 187 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEG-WGLTH-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFAN 187 (262)
T ss_dssp EEETTTCCEEEEEECSSCC-CCEEE-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEECccCcEEEEEECCCCc-eEEec-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEE
Confidence 9999999999988753322 35554 3455555555788999999987766 223456775 6765554
Q ss_pred EeCCCeEEEEECCCCeeeeeeccC------------CCceeeeeeEecCCCEEEEEec
Q 014590 285 GTTAGYASCWDLRTMKSLWETRIS------------PNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~~~~~~~~~------------~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
.-.++.|.+.|..+++.+..+... ....+.|+ ++|+++.|+..+.
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA-~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA-WDKEHHRLFVTGK 244 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE-EETTTTEEEEEET
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE-EcCCCCEEEEECC
Confidence 446889999999999988776532 13568899 9999887777664
No 255
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=3.6e-06 Score=76.61 Aligned_cols=188 Identities=14% Similarity=0.111 Sum_probs=119.9
Q ss_pred cCCCeEE--EecCCeEEEEECCCCc---eeeecCC--------C-ceeeeEEEeeeCCeEEEecCC------CeEEEEeC
Q 014590 161 FDESKIV--GLIGTRICIWRRNGLR---SVFPSRE--------G-TFMKGLCMRYFDPEAVVGCED------GTARVFDM 220 (422)
Q Consensus 161 ~~~~~l~--~~~~~~i~~w~~~~~~---~~~~~~~--------~-~~~~~~~~~~~~~~l~~~~~d------~~i~iwd~ 220 (422)
.++++|+ +..++.|.++|+.+.. .+..... + .....+.+.+++ .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7788887 5667899999987541 1111110 1 112233444555 55555444 78999999
Q ss_pred CCcceeeeeecCCc---cEEEEEecCC-CEEEEEc-------------------CCCcEEEEeCCCCccc-----c----
Q 014590 221 YSRKCSQIIRMHCA---PVTSLSLSED-QLIISGS-------------------SLGSIAISGLSSDQRL-----T---- 268 (422)
Q Consensus 221 ~~~~~~~~~~~~~~---~v~~l~~~~~-~~l~s~~-------------------~dg~i~iwd~~~~~~~-----~---- 268 (422)
++++.+..+..... .-..+-|+|+ +.+++.. .+.+|.+||+.+++.+ +
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999888863222 2345777887 6777764 3789999999987654 1
Q ss_pred ceEeEEE--ecCCCEEEEEeC------CCeEEEEECCCCee--eeee--cc----------------CCCceeeeeeEec
Q 014590 269 GIKTLCY--NPCSRLVFAGTT------AGYASCWDLRTMKS--LWET--RI----------------SPNVVYSLQHLQN 320 (422)
Q Consensus 269 ~v~~~~~--~~~~~~l~~g~~------dg~i~iwd~~~~~~--~~~~--~~----------------~~~~v~~l~~~s~ 320 (422)
....+.| +|++++++++++ +++|.+|....++. ...+ .. -......+. +|+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~-lS~ 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID-ISL 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE-ECT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE-ECC
Confidence 3445555 999999888874 56787765543321 1110 00 023467787 999
Q ss_pred CCCEEEEEec-CCeEEEEECCC---CceEEEeee
Q 014590 321 DTSTLVVGGI-DGVLRVLDQNT---GEVLSRCVM 350 (422)
Q Consensus 321 ~~~~l~s~~~-dg~v~vwd~~~---~~~~~~~~~ 350 (422)
||++|.++.. .+.|.+||+.. .+.+..+..
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~t 364 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKL 364 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEe
Confidence 9999887765 78999999852 344444433
No 256
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.89 E-value=1.4e-09 Score=93.24 Aligned_cols=66 Identities=15% Similarity=0.264 Sum_probs=54.9
Q ss_pred ccccccCHHHHHHHHcCCChHhHH-HHHhhchhHHHhccCChhHHHHHHhhcCCCCC----CCCChHHHHH
Q 014590 22 ATIESLNGDIICMIFSSLGFFDLV-RCSAVCKSWNAIINRCKLLQLLYCKLHGFSNT----SGSSMRLHLE 87 (422)
Q Consensus 22 ~~~~~Lp~e~~~~i~~~l~~~~l~-~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~----~~~~~~~~~~ 87 (422)
..+..||.||+.+||++|++++|. ++++|||+|+.++.++.+|+.+|.+.+..... ...+||.++.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~Wk~~y~ 119 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYF 119 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTTCCCC-----CCSCHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhccCcccccccCCCCCChhhhhe
Confidence 478899999999999999999999 99999999999999999999999888543211 4455665543
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.87 E-value=1.7e-05 Score=68.46 Aligned_cols=223 Identities=9% Similarity=-0.026 Sum_probs=135.0
Q ss_pred eEEEEecCCeEEEEEcCCCeE-----EEeeeCC-CceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCcee-eecCCCcee
Q 014590 124 LILTGVGDKVMRLWSLEGYKC-----VEEYSLP-NAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRSV-FPSREGTFM 194 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~~-~~~~~~~~~ 194 (422)
+|+.+.. +.|+.+++..... ...+..+ .....+++++++..|+ +. .++.|..++.++.... +........
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 3444443 4788888875432 1112111 2345688999877766 43 4689999999876432 221111233
Q ss_pred eeEEEeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-CCEEEEEcC---CCcEEEEeCCCCccc--
Q 014590 195 KGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-DQLIISGSS---LGSIAISGLSSDQRL-- 267 (422)
Q Consensus 195 ~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~---dg~i~iwd~~~~~~~-- 267 (422)
..+++.+.+..+ ++-...+.|.++++..................++++| ++.++.+.. .+.|..+++......
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 456666555554 4555678999999864332222222224568999998 465555543 368888887532211
Q ss_pred -----cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 268 -----TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.....++++|++..|+.+. ..+.|.++|.........+.. ......++ .. ++..+++...++.|.++|..+
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~-~d-~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVT-SY-GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEE-EE-TTEEEEEETTTTEEEEEETTT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEE-Ee-CCEEEEEECCCCeEEEEeCCC
Confidence 5678899999877665554 567899999985443333332 23345666 43 344444444678999999999
Q ss_pred CceEEEeee
Q 014590 342 GEVLSRCVM 350 (422)
Q Consensus 342 ~~~~~~~~~ 350 (422)
++.+..+..
T Consensus 239 g~~~~~i~~ 247 (267)
T 1npe_A 239 SKEMDTFHP 247 (267)
T ss_dssp TEEEEEECC
T ss_pred CCceEEEcc
Confidence 998888754
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=1.7e-06 Score=72.87 Aligned_cols=182 Identities=9% Similarity=-0.000 Sum_probs=120.0
Q ss_pred eEEEeeeCCCceeeEEEecCCCeEE--EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCeEEEEe
Q 014590 143 KCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFD 219 (422)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd 219 (422)
+.+.++.+......-.+..++..|. .+.+|.|+.+|+++++.+...... ......+...++.| +....++.+.++|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~-~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLG-NIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECT-TCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCC-CcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 5667776654443333333356665 566788999999998854332222 11123344455554 4455688999999
Q ss_pred CCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeC
Q 014590 220 MYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTT 287 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~ 287 (422)
..+.+.+.++..... -+.++.. ++.++.+..++.|.++|..+.+.+ ..++.+.|. +|...+..-.
T Consensus 123 ~~Tl~~~~ti~~~~e-GwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 123 GMPPQRERTTRYSGE-GWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp TTTTEEEEEEECSSC-CCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CCcCcEEEEEeCCCc-eeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence 999999998875332 2455543 456666666899999999988766 345667776 7755544446
Q ss_pred CCeEEEEECCCCeeeeeeccC-------------CCceeeeeeEecCCCEEEEEe
Q 014590 288 AGYASCWDLRTMKSLWETRIS-------------PNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 288 dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~s~~~~~l~s~~ 329 (422)
++.|.+.|..+++.+..+... ....+.|+ ++|+++.|+..+
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA-~dp~~~rlfVTG 253 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIA-VEPGSGRIFMTG 253 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEE-ECTTTCCEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEE-EcCCCCEEEEeC
Confidence 889999999999887765431 13568899 999876555544
No 259
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.82 E-value=1.5e-07 Score=88.57 Aligned_cols=226 Identities=8% Similarity=0.031 Sum_probs=150.4
Q ss_pred eEEEe----cCC-eEE-EEecCCeEEEEEcCCCeEEEeeeC--CCceeeEEE-e-cCCCeEEEec---------------
Q 014590 116 DQCRM----KRG-LIL-TGVGDKVMRLWSLEGYKCVEEYSL--PNAASLVDF-D-FDESKIVGLI--------------- 170 (422)
Q Consensus 116 ~~v~~----~~~-~l~-s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~-~-~~~~~l~~~~--------------- 170 (422)
..+.+ +|| +++ +...++.|.+.|+.+.++.+.+.. .....-+++ + |++.+++++.
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 44555 345 444 445567899999999999885554 344555776 4 8999988431
Q ss_pred ----CCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCC---------------------------------
Q 014590 171 ----GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG--------------------------------- 213 (422)
Q Consensus 171 ----~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------------------------- 213 (422)
++.+.+.|.++.+...+..-+.....+.+.+++..+++.+.+.
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 3579999999887655443322334566666777655555332
Q ss_pred -----eEEEEeCCC--cce-eeeeecCCccEEEEEecCC-C-EEEEEcCCCcEEEEeCCCCcc-----------c-----
Q 014590 214 -----TARVFDMYS--RKC-SQIIRMHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSDQR-----------L----- 267 (422)
Q Consensus 214 -----~i~iwd~~~--~~~-~~~~~~~~~~v~~l~~~~~-~-~l~s~~~dg~i~iwd~~~~~~-----------~----- 267 (422)
.|.+.|..+ ++. +..+... ....++.++|| + .++++..+.+|.++|+.+.+. +
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred eeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 477788776 444 4444432 23467889987 4 455556788999999986531 1
Q ss_pred --cceEeEEEecCCCEEEEEeCCCeEEEEECCC----------CeeeeeeccCCCc-----eeeeeeEecCCCEEEEEec
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT----------MKSLWETRISPNV-----VYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----------~~~~~~~~~~~~~-----v~~l~~~s~~~~~l~s~~~ 330 (422)
.....++|+|+|...++...|+.|.+||+.+ .+.+.++..|-.+ -.++. ++|||++|+++..
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t-~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGET-LDATNDWLVCLSK 407 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTS-TTCCSSEEEEEES
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceE-eCCCCCEEEEcCC
Confidence 7889999999994445566799999999986 4556666655432 12334 6899999998764
Q ss_pred ---CCe----------EEEEECCCCc
Q 014590 331 ---DGV----------LRVLDQNTGE 343 (422)
Q Consensus 331 ---dg~----------v~vwd~~~~~ 343 (422)
|.. -.++|+..++
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCccccccCCCCCCCcceEEEcCCCc
Confidence 442 2889996544
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=7.7e-06 Score=72.79 Aligned_cols=230 Identities=10% Similarity=-0.018 Sum_probs=135.6
Q ss_pred eeeEEEecCCCeEE-EecCCeEEEEECCCCcee-eecCC---------C----------ceeeeEEEeeeCCeEEEecCC
Q 014590 154 ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-FPSRE---------G----------TFMKGLCMRYFDPEAVVGCED 212 (422)
Q Consensus 154 ~~~~~~~~~~~~l~-~~~~~~i~~w~~~~~~~~-~~~~~---------~----------~~~~~~~~~~~~~~l~~~~~d 212 (422)
...++++++++.+. +..++.|..|+..++... +.... + .....+++...+..|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 34466777777444 666777888877664322 21100 0 112233343323456666555
Q ss_pred CeEEEEeCCCcceeeeeec-----CCccEEEEEecC-C-CEEEEEcC-----------------CCcEEEEeCCCCccc-
Q 014590 213 GTARVFDMYSRKCSQIIRM-----HCAPVTSLSLSE-D-QLIISGSS-----------------LGSIAISGLSSDQRL- 267 (422)
Q Consensus 213 ~~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~-~-~~l~s~~~-----------------dg~i~iwd~~~~~~~- 267 (422)
+.|..+|..+++.. .+.. .......+++.+ + ++.++-.. ++.|..+|..+++..
T Consensus 101 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 66888887765422 2211 113467899988 6 44444322 367888988766532
Q ss_pred -----cceEeEEEecCCCEEEEE-eCCCeEEEEECCCCe--eeeeeccCCCceeeeeeEecCCCEEEEEec---------
Q 014590 268 -----TGIKTLCYNPCSRLVFAG-TTAGYASCWDLRTMK--SLWETRISPNVVYSLQHLQNDTSTLVVGGI--------- 330 (422)
Q Consensus 268 -----~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~--------- 330 (422)
.....++++|+|+.|+++ +.++.|.+|++.... ....+....+ ...++ ++++|++.++...
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~-~d~~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK-RNADGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE-ECTTSCEEEEEEEETTSSTTSC
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE-ECCCCCEEEEecCcccccccCC
Confidence 456789999999876665 556889999987421 1111111223 67787 8999986666544
Q ss_pred -CCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCC
Q 014590 331 -DGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSK 408 (422)
Q Consensus 331 -dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg 408 (422)
.+.|..+|.. ++.+..+....+. .-..++++.+ ++.++++....+
T Consensus 258 ~~~~v~~~d~~-G~~~~~~~~~~g~--------------------------------~~~~~~~~~~~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 258 VDPKGIKFDEF-GNILEVIPLPPPF--------------------------------AGEHFEQIQEHDGLLYIGTLFHG 304 (322)
T ss_dssp EEEEEEEECTT-SCEEEEEECCTTT--------------------------------TTSCCCEEEEETTEEEEECSSCS
T ss_pred CccEEEEECCC-CCEEEEEECCCCC--------------------------------ccccceEEEEeCCEEEEeecCCC
Confidence 4678888864 7777666442210 0124555666 577777777888
Q ss_pred eEEEEEccCCC
Q 014590 409 YIRLWKFNYSD 419 (422)
Q Consensus 409 ~i~iW~~~~~~ 419 (422)
.|..+++....
T Consensus 305 ~i~~~~~~~~~ 315 (322)
T 2fp8_A 305 SVGILVYDKKG 315 (322)
T ss_dssp EEEEEEC----
T ss_pred ceEEEeccccc
Confidence 99999886543
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=1.4e-05 Score=66.75 Aligned_cols=183 Identities=11% Similarity=0.056 Sum_probs=119.6
Q ss_pred CeEEEeeeCCCceee--EEEecCCCeEE-EecC---CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCe
Q 014590 142 YKCVEEYSLPNAASL--VDFDFDESKIV-GLIG---TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGT 214 (422)
Q Consensus 142 ~~~~~~~~~~~~~~~--~~~~~~~~~l~-~~~~---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~ 214 (422)
.+.+.++.+...... +.|+. ..|. ++.. +.|+.+|+++++.+....-........+...++.+ .....++.
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEcCCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE
Confidence 356777766544443 66654 5555 4433 48999999999865332222111223344455654 44556899
Q ss_pred EEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------cceEeEEEecCCCEE
Q 014590 215 ARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLV 282 (422)
Q Consensus 215 i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l 282 (422)
+.++|..+.+.+.++...... ..++. .++.++.+..++.|.++|..+.+.+ ..++.+.+. +|+..
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G-wglt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG-WALTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC-CEEEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECCcCcEEEEEeCCCCc-eEEee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 999999999999988754333 46664 3444444456889999999988766 344556654 66655
Q ss_pred EEEeCCCeEEEEECCCCeeeeeeccC-------------CCceeeeeeEecCCCEEEEEec
Q 014590 283 FAGTTAGYASCWDLRTMKSLWETRIS-------------PNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 283 ~~g~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+..-.+..|.+.|..+++.+..+... ....+.|+ ++|+++.|+..+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA-~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIA-FDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEE-EETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEE-EcCCCCEEEEECC
Confidence 44446789999999999888765421 13568899 9998876666553
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.75 E-value=3.5e-05 Score=66.41 Aligned_cols=175 Identities=11% Similarity=0.061 Sum_probs=107.0
Q ss_pred eEEEecCCeEEEEECCCCce-------eeecCCCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccE
Q 014590 165 KIVGLIGTRICIWRRNGLRS-------VFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPV 236 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 236 (422)
.|+-+..+.|+.+++++... ++... ......+++.+.+..+ ++-..++.|..+++..+.....+.......
T Consensus 3 ~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~-~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQTGKIERLPLERNTMKKTEAKAFLHIP-AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEEEEEEEEEESSSCBCGGGCEEEEEEE-EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcCCeEEEEEecCcccccccceeeecCC-CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 34433345778888776432 11111 1122345555545554 455567899999987654433333223467
Q ss_pred EEEEecCC-C-EEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC---CCeEEEEECCCCeeeee
Q 014590 237 TSLSLSED-Q-LIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT---AGYASCWDLRTMKSLWE 304 (422)
Q Consensus 237 ~~l~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~~~~~ 304 (422)
..++++++ + .+++-...+.|.++++...... .....++++|++..|+.+.. .+.|..+++.. .....
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~ 160 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRI 160 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEE
Confidence 88999874 4 4555566788999998643221 46789999997666665554 46888888763 32222
Q ss_pred ec-cCCCceeeeeeEecCCCEEE-EEecCCeEEEEECCCC
Q 014590 305 TR-ISPNVVYSLQHLQNDTSTLV-VGGIDGVLRVLDQNTG 342 (422)
Q Consensus 305 ~~-~~~~~v~~l~~~s~~~~~l~-s~~~dg~v~vwd~~~~ 342 (422)
+. ..-.....++ ++++++.|+ +-...+.|.++|....
T Consensus 161 ~~~~~~~~P~gia-~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 161 LAQDNLGLPNGLT-FDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp EECTTCSCEEEEE-EETTTTEEEEEETTTTEEEEEETTEE
T ss_pred EEECCCCCCcEEE-EcCCCCEEEEEECCCCEEEEEecCCC
Confidence 21 2234578888 999877654 4445689999998743
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=3.6e-05 Score=77.32 Aligned_cols=227 Identities=13% Similarity=0.052 Sum_probs=141.8
Q ss_pred cceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeee---------------CCCceeeEEEecCCCeEEEecCCeEEE
Q 014590 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYS---------------LPNAASLVDFDFDESKIVGLIGTRICI 176 (422)
Q Consensus 113 ~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~i~~ 176 (422)
..|.++.. ++|.|..|...+-|.++|..+++...... ....+..+....+|..-+++.++.|..
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~ 337 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINF 337 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEE
Confidence 45888877 56677777775678889988765432211 012344566677787777888889999
Q ss_pred EECCCCceeeecC--------CCceeeeEEEeeeC-CeEEEecCCCeEEEEeCCCcceeeee---ecCCccEEEEEecCC
Q 014590 177 WRRNGLRSVFPSR--------EGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSLSLSED 244 (422)
Q Consensus 177 w~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~~~ 244 (422)
++..+........ .-....+.++..+. ..+..|+.++-|..+|..+++..... ......|.++...++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~ 417 (781)
T 3v9f_A 338 ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE 417 (781)
T ss_dssp ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT
T ss_pred eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC
Confidence 9987654221111 10112245555554 34888887777899998765432211 123467889988766
Q ss_pred CEEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccC-----CC
Q 014590 245 QLIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRIS-----PN 310 (422)
Q Consensus 245 ~~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----~~ 310 (422)
+.+..|+.++-+..+|..+++.. ..|.++...++|. |..|+.. -|..||..+++........ ..
T Consensus 418 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~ 495 (781)
T 3v9f_A 418 GNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTHA-GVFVIDLASKKVIHHYDTSNSQLLEN 495 (781)
T ss_dssp SCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEETT-EEEEEESSSSSCCEEECTTTSSCSCS
T ss_pred CCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEECC-ceEEEeCCCCeEEecccCcccccccc
Confidence 66777887778888988665432 4688888877775 5555554 5899998876543222111 35
Q ss_pred ceeeeeeEecCCCEEEEEecCCeEEEEECCCCc
Q 014590 311 VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGE 343 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 343 (422)
.|.++. ..++|.+.+ |+.++-+..||..+++
T Consensus 496 ~i~~i~-~d~~g~lWi-gt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 496 FVRSIA-QDSEGRFWI-GTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CEEEEE-ECTTCCEEE-EESSSCEEEECTTCCE
T ss_pred eeEEEE-EcCCCCEEE-EEcCCCEEEEeCCCCe
Confidence 688887 888887554 4443347888876553
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.67 E-value=8.5e-05 Score=65.45 Aligned_cols=223 Identities=10% Similarity=0.037 Sum_probs=134.3
Q ss_pred eeeEEeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecC---CeEEEE
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIG---TRICIW 177 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~~w 177 (422)
..+.++..+ .....+++ +++ ++++-..++.|..||... +....+........+++.++++.+++... ..|..+
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 344555433 45678888 566 555555789999999875 44444555555666999999997665432 247777
Q ss_pred ECCCCcee-e-ecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcce-eeee---------ecCCccEEEEEecCC
Q 014590 178 RRNGLRSV-F-PSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKC-SQII---------RMHCAPVTSLSLSED 244 (422)
Q Consensus 178 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~-~~~~---------~~~~~~v~~l~~~~~ 244 (422)
+..+++.. + ...........+.. .+.. +++-..++.|..+|..+++. +... ...-...+.+ +++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~d 177 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRF 177 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEE
T ss_pred cCCCCeEEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcC
Confidence 76666532 2 21122222223322 2333 44444688999999865421 1100 0111234555 444
Q ss_pred -C-EEEEEcCCCcEEEEeCCC-Cccc--------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee--eeeccCCCc
Q 014590 245 -Q-LIISGSSLGSIAISGLSS-DQRL--------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL--WETRISPNV 311 (422)
Q Consensus 245 -~-~l~s~~~dg~i~iwd~~~-~~~~--------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~~~~~ 311 (422)
+ ++++-...+.|..+++.. ++.. .....++++++|++.++....+.|.++|.. ++.. ..+...-..
T Consensus 178 g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~ 256 (306)
T 2p4o_A 178 GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIG 256 (306)
T ss_dssp TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTT
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCC
Confidence 4 555666788999999864 3321 346778999999887777777889999976 5542 233333356
Q ss_pred eeeeeeEe---cCCCEEEEEecCC
Q 014590 312 VYSLQHLQ---NDTSTLVVGGIDG 332 (422)
Q Consensus 312 v~~l~~~s---~~~~~l~s~~~dg 332 (422)
.++++ |. |+++.|+..+..+
T Consensus 257 p~~~a-~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 257 STAVA-FGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEE-ECCSTTTTTEEEEEECTT
T ss_pred ceEEE-EecccCCCCEEEEECCCC
Confidence 78888 87 7877776665443
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.00012 Score=73.62 Aligned_cols=227 Identities=12% Similarity=0.027 Sum_probs=139.7
Q ss_pred cceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeC--------CCceeeEEEecCCCeEEEecCCeEEEEECCCCc
Q 014590 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL--------PNAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (422)
Q Consensus 113 ~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~ 183 (422)
..|.++.. ++|.|..|..+ -+.+||..+++....... ...+..+....+|...+++..+.|.+++..+..
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 289 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQ 289 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC-
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCe
Confidence 45778777 45656666655 688999887655422111 223445666667777778876788999987765
Q ss_pred eeeecC-------------CCceeeeEEEeeeCC-eEEEecCCCeEEEEeCCCcceeeeee---------cCCccEEEEE
Q 014590 184 SVFPSR-------------EGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIR---------MHCAPVTSLS 240 (422)
Q Consensus 184 ~~~~~~-------------~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~v~~l~ 240 (422)
...... .-....+.++..+.. .|..|+.++-|..++..++....... .....|.++.
T Consensus 290 ~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~ 369 (781)
T 3v9f_A 290 FLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVC 369 (781)
T ss_dssp --------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEE
T ss_pred eeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEE
Confidence 221110 001112344444433 38888878889999986554322110 1235689998
Q ss_pred ecCCCEEEEEcCCCcEEEEeCCCCccc----------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeee--ccC
Q 014590 241 LSEDQLIISGSSLGSIAISGLSSDQRL----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWET--RIS 308 (422)
Q Consensus 241 ~~~~~~l~s~~~dg~i~iwd~~~~~~~----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~--~~~ 308 (422)
..+++.+..|+.++-|..+|..++... ..|.++...++|.+ .+|+.++-|..+|..+++...-. ...
T Consensus 370 ~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~ 448 (781)
T 3v9f_A 370 DDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNE 448 (781)
T ss_dssp ECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTC
T ss_pred EcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCC
Confidence 877677778887777888887654321 56888888777764 55776666999998876543221 123
Q ss_pred CCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 309 PNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
...|.++. ..+++. |..|+. +.|..+|..+++.
T Consensus 449 ~~~v~~i~-~d~~g~-lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 449 LLDVRVFY-EDKNKK-IWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CCCEEEEE-ECTTSE-EEEEET-TEEEEEESSSSSC
T ss_pred CCeEEEEE-ECCCCC-EEEEEC-CceEEEeCCCCeE
Confidence 46788887 777666 444555 4589999876654
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.58 E-value=9.8e-05 Score=65.55 Aligned_cols=229 Identities=10% Similarity=0.067 Sum_probs=139.7
Q ss_pred EeeccccceeEEEe-cCC-eEEEEecCCeEEEEEcCCCeEEEeeeC---------------------CCceeeEEEec-C
Q 014590 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL---------------------PNAASLVDFDF-D 162 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~---------------------~~~~~~~~~~~-~ 162 (422)
.+.+.-....++++ +++ +++++..++.|..||..+++.. .+.. ......+++.+ +
T Consensus 13 ~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 13 LIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp EEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred ecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 34454455677888 456 6888888999999998875443 2221 01244588887 6
Q ss_pred CCeEEEecCCeEEEEECCCCce-eeec-CCC---ceeeeEEEee-eCCeEEEec-----------------CCCeEEEEe
Q 014590 163 ESKIVGLIGTRICIWRRNGLRS-VFPS-REG---TFMKGLCMRY-FDPEAVVGC-----------------EDGTARVFD 219 (422)
Q Consensus 163 ~~~l~~~~~~~i~~w~~~~~~~-~~~~-~~~---~~~~~~~~~~-~~~~l~~~~-----------------~d~~i~iwd 219 (422)
+..+++...+.+..+|..++.. .+.. ..+ .....+++.. .+...++-. .++.|..+|
T Consensus 92 g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 92 NQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp TEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred CcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 6666676667788888876542 2211 111 1123344444 443333322 136788888
Q ss_pred CCCcceeeeeecCCccEEEEEecCC-CEEE-EEcCCCcEEEEeCCCCcc---c-----cceEeEEEecCCCEEEEEeC--
Q 014590 220 MYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSLGSIAISGLSSDQR---L-----TGIKTLCYNPCSRLVFAGTT-- 287 (422)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~-s~~~dg~i~iwd~~~~~~---~-----~~v~~~~~~~~~~~l~~g~~-- 287 (422)
..+++....... ......++++|+ +.++ +-+..+.|..+++..... . .....++++++|++.++...
T Consensus 172 ~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 172 PSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp TTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEEEET
T ss_pred CCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEecCcc
Confidence 876654322221 123457899987 5454 446678999999874321 1 11678899999987666544
Q ss_pred --------CCeEEEEECCCCeeeeeeccCC----CceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 288 --------AGYASCWDLRTMKSLWETRISP----NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 288 --------dg~i~iwd~~~~~~~~~~~~~~----~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
.+.|..+|.. ++.+..+.... ..+++++ + .++++.++...++.|.++++.
T Consensus 251 ~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~-~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQ-E-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEE-E-ETTEEEEECSSCSEEEEEEC-
T ss_pred cccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEE-E-eCCEEEEeecCCCceEEEecc
Confidence 4678888875 77666665432 3466665 5 456666666678889999875
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=0.00032 Score=63.97 Aligned_cols=234 Identities=10% Similarity=-0.042 Sum_probs=146.1
Q ss_pred ceeEEEec-CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCcee-eecC
Q 014590 114 GVDQCRMK-RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRSV-FPSR 189 (422)
Q Consensus 114 ~v~~v~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~~-~~~~ 189 (422)
.-.|.+.. ..+|+.+.. ..|+..++.................++|++.+..|+ +. ..+.|..+++++.... +...
T Consensus 78 ~~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 78 RRSCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp SSCEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred CCeECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 34455543 335554443 578889988766655555555667799998777766 43 5688999998876532 2221
Q ss_pred CCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEE-cCC-CcEEEEeCCCCc
Q 014590 190 EGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG-SSL-GSIAISGLSSDQ 265 (422)
Q Consensus 190 ~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~-~~d-g~i~iwd~~~~~ 265 (422)
.......+++.+.+.. .++-...+.|.+.++........+.........++++|. +.++.+ ... +.|..+++....
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 1122235666655555 445556678888887644333333333356688999974 544444 344 678888875432
Q ss_pred cc-------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEE
Q 014590 266 RL-------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVL 337 (422)
Q Consensus 266 ~~-------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vw 337 (422)
.. .....++++|++..|+.+. ..+.|..+|+........+.........|+ + ..+..+++-...+.|..+
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gia-v-~~~~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT-V-FEDSLYWTDWHTKSINSA 314 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEE-E-ETTEEEEEETTTTEEEEE
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEE-E-ECCEEEEeeCCCCeEEEE
Confidence 22 4578999998776666554 567899999874332222322334567787 6 455666677778899999
Q ss_pred ECCCCceEEEeee
Q 014590 338 DQNTGEVLSRCVM 350 (422)
Q Consensus 338 d~~~~~~~~~~~~ 350 (422)
+..+|+....+..
T Consensus 315 ~~~~G~~~~~i~~ 327 (386)
T 3v65_B 315 NKFTGKNQEIIRN 327 (386)
T ss_dssp ETTTCCSCEEEEC
T ss_pred ECCCCcceEEEcc
Confidence 9777877766654
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.54 E-value=0.00045 Score=62.03 Aligned_cols=236 Identities=10% Similarity=-0.043 Sum_probs=147.9
Q ss_pred ccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCcee-ee
Q 014590 112 SVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRSV-FP 187 (422)
Q Consensus 112 ~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~~-~~ 187 (422)
.+..+|.+. ++.+|+.+. ...|+..++........+........++|++.+..|+ +. ..+.|..+++++.... +.
T Consensus 33 ~d~~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp TTSSCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCCcccccccCceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 445566665 334554443 3568888887766655555555667799998777776 43 4688999998876522 21
Q ss_pred cCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CE-EEEEcCC-CcEEEEeCCC
Q 014590 188 SREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL-IISGSSL-GSIAISGLSS 263 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~-l~s~~~d-g~i~iwd~~~ 263 (422)
.........+++.+.+.. .++-...+.|.+.++........+...-.....++++|. +. +++-... +.|...++..
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 111122235666655555 455556788999998644333223333345689999974 54 4444444 7888888754
Q ss_pred Cccc-------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEE
Q 014590 264 DQRL-------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLR 335 (422)
Q Consensus 264 ~~~~-------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~ 335 (422)
.... .....++++|++..|+.+. ..+.|..+|+........+.........++ + .++...++-...+.|.
T Consensus 192 ~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gia-v-~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 192 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT-V-FEDSLYWTDWHTKSIN 269 (349)
T ss_dssp CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEE-E-ETTEEEEEETTTTEEE
T ss_pred CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEE-E-ECCEEEEecCCCCeEE
Confidence 3222 5678999998777666554 567899999874332222223334567787 6 3556666666788899
Q ss_pred EEECCCCceEEEeee
Q 014590 336 VLDQNTGEVLSRCVM 350 (422)
Q Consensus 336 vwd~~~~~~~~~~~~ 350 (422)
.++..+|+....+..
T Consensus 270 ~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 270 SANKFTGKNQEIIRN 284 (349)
T ss_dssp EEETTTCCSCEEEEC
T ss_pred EEEccCCCccEEecc
Confidence 999777877666643
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00098 Score=58.86 Aligned_cols=216 Identities=13% Similarity=0.056 Sum_probs=135.5
Q ss_pred CeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCC----Cc-eeeecCCCceeeeEEEeeeCC
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNG----LR-SVFPSREGTFMKGLCMRYFDP 204 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 204 (422)
..|+..|+.+.+....+........+++++++..++ +. .++.|..+++++ .. .......-.....+++.+.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 568999998877666665555667799998877766 44 468899999876 22 222111112224566665555
Q ss_pred eE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC-CCEEEEEcC-C-CcEEEEeCCCCccc-------cceEeE
Q 014590 205 EA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE-DQLIISGSS-L-GSIAISGLSSDQRL-------TGIKTL 273 (422)
Q Consensus 205 ~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~-d-g~i~iwd~~~~~~~-------~~v~~~ 273 (422)
.| ++-...+.|.+.++........+.........++++| ++.++.+.. . +.|...++...... .....+
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 169 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEE
Confidence 54 4546678999999864433333333335678999997 455444433 3 67888887432211 567899
Q ss_pred EEecCCCEEEEEe-CCCeEEEEECCCCeeeeeec---cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 274 CYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETR---ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 274 ~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
+++|++..|+.+. ..+.|..+|+... ....+. ..-.....++ +. .+..+++-...+.|..++..+|+.+..+.
T Consensus 170 a~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~gia-v~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 170 TLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLA-VF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEE-EE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEE-EE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 9998877766655 5678999998743 222221 1223457787 54 45666666678899999988887766664
Q ss_pred e
Q 014590 350 M 350 (422)
Q Consensus 350 ~ 350 (422)
.
T Consensus 247 ~ 247 (316)
T 1ijq_A 247 E 247 (316)
T ss_dssp C
T ss_pred c
Confidence 3
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.38 E-value=2.8e-05 Score=76.38 Aligned_cols=221 Identities=10% Similarity=0.052 Sum_probs=120.1
Q ss_pred CC-eEEEEecCC-----------eEEEEEcCCCeEE--EeeeCCCce--eeEEEecCCCeEE-Ee-cCCeEEEEECCCCc
Q 014590 122 RG-LILTGVGDK-----------VMRLWSLEGYKCV--EEYSLPNAA--SLVDFDFDESKIV-GL-IGTRICIWRRNGLR 183 (422)
Q Consensus 122 ~~-~l~s~~~dg-----------~v~iwd~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~ 183 (422)
++ .++.|+.+. .+.+||..+++.. .....+... ...++..++..++ |+ .+..+.+||..+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 66 666676543 6889999887543 223222222 2367778888887 44 45689999998775
Q ss_pred eee-e-cCCCceeeeEEEeeeCCeEEEec-CC-----CeEEEEeCCCcceeee-----eecCCccEEEEEecCCCEEEEE
Q 014590 184 SVF-P-SREGTFMKGLCMRYFDPEAVVGC-ED-----GTARVFDMYSRKCSQI-----IRMHCAPVTSLSLSEDQLIISG 250 (422)
Q Consensus 184 ~~~-~-~~~~~~~~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~-----~~~~~~~v~~l~~~~~~~l~s~ 250 (422)
-.. . ..........++..++..++.|+ .+ ..+.+||..+++-... .......-.++....+..++.|
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G 356 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFG 356 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEE
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEE
Confidence 321 1 11111112223333566677777 34 5789999987653321 0000000000111123444555
Q ss_pred cCC---------CcEEEEeCCCCccc-------c---------ceEeEEEe-cCCCEEEEEeCCC-----------eEEE
Q 014590 251 SSL---------GSIAISGLSSDQRL-------T---------GIKTLCYN-PCSRLVFAGTTAG-----------YASC 293 (422)
Q Consensus 251 ~~d---------g~i~iwd~~~~~~~-------~---------~v~~~~~~-~~~~~l~~g~~dg-----------~i~i 293 (422)
+.+ ..+..||..+.... . .-.++.+. .++++++.|+.++ .|.+
T Consensus 357 g~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~ 436 (656)
T 1k3i_A 357 WKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITL 436 (656)
T ss_dssp CGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEEC
T ss_pred CCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEc
Confidence 444 35677887765422 1 12334443 3677888887532 6788
Q ss_pred EECCCCeeeeee--ccCCCcee-eeeeEecCCCEEEEEecC-----------CeEEEEECCCCc
Q 014590 294 WDLRTMKSLWET--RISPNVVY-SLQHLQNDTSTLVVGGID-----------GVLRVLDQNTGE 343 (422)
Q Consensus 294 wd~~~~~~~~~~--~~~~~~v~-~l~~~s~~~~~l~s~~~d-----------g~v~vwd~~~~~ 343 (422)
||..+.+-.... ..+..... ++. ..|+++.++.|+.+ ..+.+||..+.+
T Consensus 437 yd~~~~~W~~~~~~~mp~~R~~~~~~-~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 437 GEPGTSPNTVFASNGLYFARTFHTSV-VLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CSTTSCCEEEECTTCCSSCCBSCEEE-ECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCCCeeEEccCCCCCCcccCCeE-ECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 888765433221 11222222 223 55799999998865 457888876654
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.33 E-value=0.0018 Score=59.02 Aligned_cols=177 Identities=6% Similarity=-0.058 Sum_probs=107.3
Q ss_pred CeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEec
Q 014590 164 SKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 164 ~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 242 (422)
..|+.+....|+..++.+...............+++.+.... +++-...+.|..+++..+.....+.........+++.
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD 167 (386)
T ss_dssp CEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEE
T ss_pred ceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEE
Confidence 344555556788888876553322222222334555544454 4455567889999987654433333222344567777
Q ss_pred C-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC-C-CeEEEEECCCCeeeeeeccCCCc
Q 014590 243 E-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT-A-GYASCWDLRTMKSLWETRISPNV 311 (422)
Q Consensus 243 ~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~-d-g~i~iwd~~~~~~~~~~~~~~~~ 311 (422)
+ + .++++-...+.|.+.++...... .....++++|.+..|+.... . +.|..+++............-..
T Consensus 168 ~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 247 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 247 (386)
T ss_dssp TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 5 3 45566666788888887644322 56789999997776666553 3 68888888743222222222345
Q ss_pred eeeeeeEecCCCEEEEE-ecCCeEEEEECCC
Q 014590 312 VYSLQHLQNDTSTLVVG-GIDGVLRVLDQNT 341 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~~ 341 (422)
.+.|+ ++|++..|+.+ +..+.|..+|+..
T Consensus 248 PnGla-vd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 248 PNGLT-IDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEE-EEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eeeEE-EeCCCCEEEEEECCCCEEEEEeCCC
Confidence 68898 99776655544 4567899998763
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.31 E-value=0.002 Score=58.98 Aligned_cols=224 Identities=12% Similarity=0.049 Sum_probs=140.6
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCc-----eeeecCCCceeee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLR-----SVFPSREGTFMKG 196 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~-----~~~~~~~~~~~~~ 196 (422)
+|+.+. ...|+..++........+........++|++.+..|+ +. ..+.|..+++++.. .............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 454444 4689999998766655555556667799999777776 44 46789889887621 2222222223345
Q ss_pred EEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc--CCCcEEEEeCCCCccc-----
Q 014590 197 LCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS--SLGSIAISGLSSDQRL----- 267 (422)
Q Consensus 197 ~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~--~dg~i~iwd~~~~~~~----- 267 (422)
+++.+.+.. .++-...+.|.+.++........+.........++++|. +.++.+. ..+.|...++......
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 666665555 445556788999998655443333333445789999974 5555443 2478888887543322
Q ss_pred --cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeecc--CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 268 --TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRI--SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
.....|++++++..|+.+. ..+.|..+|+........... .-....+++ + ..+..+++-...+.|..+|..+|
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~-v-~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-V-FEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEE-E-ETTEEEEEESSSCSEEEEESSSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEE-E-eCCEEEEecCCCCeEEEEEcCCC
Confidence 5678999998877777665 567899999874332222221 223456777 5 34455666667788999998888
Q ss_pred ceEEEeee
Q 014590 343 EVLSRCVM 350 (422)
Q Consensus 343 ~~~~~~~~ 350 (422)
+.+..+..
T Consensus 322 ~~~~~i~~ 329 (400)
T 3p5b_L 322 SDVNLLAE 329 (400)
T ss_dssp CCCEEEEC
T ss_pred CceEEEec
Confidence 77666653
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.28 E-value=6.6e-05 Score=73.77 Aligned_cols=202 Identities=11% Similarity=0.058 Sum_probs=104.7
Q ss_pred CCeEEEeeeCCCceeeEEEec-CCCeEE-EecCC-----------eEEEEECCCCcee----eecCCCceeeeEEEeeeC
Q 014590 141 GYKCVEEYSLPNAASLVDFDF-DESKIV-GLIGT-----------RICIWRRNGLRSV----FPSREGTFMKGLCMRYFD 203 (422)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~~~-----------~i~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~ 203 (422)
+++.......+......++.+ +++.++ ++.+. .+.+||..+++.. ............++..++
T Consensus 175 ~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g 254 (656)
T 1k3i_A 175 LGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG 254 (656)
T ss_dssp SCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS
T ss_pred CCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC
Confidence 344433333343344577777 777666 54332 5888999877622 111111111223444556
Q ss_pred CeEEEec-CCCeEEEEeCCCcceeeeeecCCcc-EEEEEec-CCCEEEEEc-CC-----CcEEEEeCCCCccc-------
Q 014590 204 PEAVVGC-EDGTARVFDMYSRKCSQIIRMHCAP-VTSLSLS-EDQLIISGS-SL-----GSIAISGLSSDQRL------- 267 (422)
Q Consensus 204 ~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~-v~~l~~~-~~~~l~s~~-~d-----g~i~iwd~~~~~~~------- 267 (422)
..++.|+ .+..+.+||..+++-...-..+... -.+++.. .+.+++.|+ .+ ..+.+||..+++-.
T Consensus 255 ~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~ 334 (656)
T 1k3i_A 255 QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKV 334 (656)
T ss_dssp CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCS
T ss_pred CEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccc
Confidence 6677777 4568999999876533221111111 1234444 457888887 34 56899998765422
Q ss_pred cceE----eEEEecCCCEEEEEeCCC---------eEEEEECCCCeeeeeeccCC---------CceeeeeeEe-cCCCE
Q 014590 268 TGIK----TLCYNPCSRLVFAGTTAG---------YASCWDLRTMKSLWETRISP---------NVVYSLQHLQ-NDTST 324 (422)
Q Consensus 268 ~~v~----~~~~~~~~~~l~~g~~dg---------~i~iwd~~~~~~~~~~~~~~---------~~v~~l~~~s-~~~~~ 324 (422)
.+.. ...+..++..++.|+.+| .+..||..+.........+. ..-.++. ++ .+++.
T Consensus 335 ~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~-~~~~~~~i 413 (656)
T 1k3i_A 335 NPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVM-YDAVKGKI 413 (656)
T ss_dssp GGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEE-EETTTTEE
T ss_pred cccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEe-ccCCCCeE
Confidence 0000 001123445555555443 46788887654332221111 1122333 43 36777
Q ss_pred EEEEecCC-----------eEEEEECCCCc
Q 014590 325 LVVGGIDG-----------VLRVLDQNTGE 343 (422)
Q Consensus 325 l~s~~~dg-----------~v~vwd~~~~~ 343 (422)
++.|+.++ .|.+||..+.+
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~ 443 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSP 443 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCC
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCC
Confidence 78887543 56666665544
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.28 E-value=0.002 Score=57.71 Aligned_cols=175 Identities=6% Similarity=-0.049 Sum_probs=105.8
Q ss_pred eEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecC
Q 014590 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE 243 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 243 (422)
.|+.+....|+..++++...............+++.+....| ++-...+.|..+++..+.....+.........+++.+
T Consensus 46 ~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~ 125 (349)
T 3v64_C 46 VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW 125 (349)
T ss_dssp EEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred eeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEec
Confidence 344444556777777665432222222222345555444554 4555678899999876554333332223446788875
Q ss_pred -C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEe-CC-CeEEEEECCCCeeeeee-ccCCCc
Q 014590 244 -D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGT-TA-GYASCWDLRTMKSLWET-RISPNV 311 (422)
Q Consensus 244 -~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~-~d-g~i~iwd~~~~~~~~~~-~~~~~~ 311 (422)
+ .++++-...+.|.+.++...... .....++++|.+..|+... .. +.|..+++... ....+ ...-..
T Consensus 126 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~ 204 (349)
T 3v64_C 126 VHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFW 204 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSC
T ss_pred CCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCC
Confidence 3 45566667788999998644322 5678999999766665554 44 78988888743 22222 222345
Q ss_pred eeeeeeEecCCCEEEEE-ecCCeEEEEECCC
Q 014590 312 VYSLQHLQNDTSTLVVG-GIDGVLRVLDQNT 341 (422)
Q Consensus 312 v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~~ 341 (422)
.+.|+ ++|++..|+.+ +..+.|..+|+..
T Consensus 205 PnGla-~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 205 PNGLT-IDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEE-EETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceEE-EeCCCCEEEEEECCCCEEEEEeCCC
Confidence 68898 99877665554 4567899999863
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.24 E-value=0.0022 Score=56.59 Aligned_cols=217 Identities=14% Similarity=0.059 Sum_probs=132.3
Q ss_pred CCeEEEEEcCCCe--EEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCce---eeecCCCceeeeEEEeeeC
Q 014590 131 DKVMRLWSLEGYK--CVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRS---VFPSREGTFMKGLCMRYFD 203 (422)
Q Consensus 131 dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~---~~~~~~~~~~~~~~~~~~~ 203 (422)
...|+..++.... ....+........++|.+.+..|. +. ..+.|..+++++... +..... .....+++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l-~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC-SCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC-CCccEEEEEcCC
Confidence 3578889987652 222222223345688888766666 43 467899999877631 222111 122346666545
Q ss_pred Ce-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc--CCCcEEEEeCCCCccc-------cceEe
Q 014590 204 PE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS--SLGSIAISGLSSDQRL-------TGIKT 272 (422)
Q Consensus 204 ~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~--~dg~i~iwd~~~~~~~-------~~v~~ 272 (422)
.. .++-...+.|.++++........+.........++++|. +.++.+. ..+.|...++...... .....
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 54 445556778999998643322222233455688999874 5555544 3577888887532221 56789
Q ss_pred EEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 273 LCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 273 ~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
++++|++..|+.+. ..+.|..+|+.................+++ +. .+..+.+-...+.|..++..+|+....+..
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gla-v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT-LF-EDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEE-EE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEE-Ee-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 99999777666554 567899999874322212222334567777 54 345566666788999999988877666543
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.0023 Score=56.10 Aligned_cols=198 Identities=9% Similarity=0.022 Sum_probs=119.4
Q ss_pred CCeEEEeeeCCCceeeEEEecCCCeEEEe-cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-C-CeEEE
Q 014590 141 GYKCVEEYSLPNAASLVDFDFDESKIVGL-IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-D-GTARV 217 (422)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d-~~i~i 217 (422)
..+.+..+..+.....++++++++.+++. .++.|..+|.++......... .....+++..++..+++... + ..|..
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~-~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVE-GKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECS-SEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCC-CCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 34566667655556678999998866654 678999999877543322222 23345556556654444322 2 24777
Q ss_pred EeCCCcceeeeeec-CCccEEEEEecCCCE-EEEEcCCCcEEEEeCCCCc--c----------c-----cceEeEEEecC
Q 014590 218 FDMYSRKCSQIIRM-HCAPVTSLSLSEDQL-IISGSSLGSIAISGLSSDQ--R----------L-----TGIKTLCYNPC 278 (422)
Q Consensus 218 wd~~~~~~~~~~~~-~~~~v~~l~~~~~~~-l~s~~~dg~i~iwd~~~~~--~----------~-----~~v~~~~~~~~ 278 (422)
+|..+++....... .......++..++.. +++-..++.|..+|...+. . . .....+ +|+
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~d 177 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRF 177 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEE
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcC
Confidence 78777765433221 122334555455544 4444468899999876431 1 0 234455 788
Q ss_pred CCEEEEEe-CCCeEEEEECCC-Cee--eeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCce
Q 014590 279 SRLVFAGT-TAGYASCWDLRT-MKS--LWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 279 ~~~l~~g~-~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 344 (422)
++.|+++. ..+.|..|++.. ++. ...+.. ......++ ++++|++.++....+.|.++|.. |+.
T Consensus 178 g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~-vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 178 GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFA-FDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEE-EBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeE-ECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 87666554 567899999874 321 111111 12356677 88999887777778889999975 655
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.18 E-value=0.003 Score=55.73 Aligned_cols=181 Identities=8% Similarity=-0.021 Sum_probs=107.4
Q ss_pred eEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCC----cceeeeeecCCccEEEE
Q 014590 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYS----RKCSQIIRMHCAPVTSL 239 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~l 239 (422)
+|+-+....|+..++++...............+.+...+.. +++-..++.|..+++.. ......+...-.....+
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 34455556788888887653322112222234555544455 44555678999999875 22222222222345678
Q ss_pred EecC-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCC--CeEEEEECCCCeeeeee-cc
Q 014590 240 SLSE-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTA--GYASCWDLRTMKSLWET-RI 307 (422)
Q Consensus 240 ~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~-~~ 307 (422)
++++ + +++++-...+.|.+.|+...... .....++++|.+..|+.+... +.|..+++. +.....+ ..
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~ 161 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE 161 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC
Confidence 8874 4 45556567889999998643322 567899999977766655542 688888876 3333333 22
Q ss_pred CCCceeeeeeEecCCCEEEEE-ecCCeEEEEECCCCceEEEe
Q 014590 308 SPNVVYSLQHLQNDTSTLVVG-GIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 308 ~~~~v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~ 348 (422)
.-.....++ ++++++.|+.+ +..+.|..+|+. |.....+
T Consensus 162 ~~~~P~gla-~d~~~~~lY~~D~~~~~I~~~d~d-g~~~~~~ 201 (316)
T 1ijq_A 162 NIQWPNGIT-LDLLSGRLYWVDSKLHSISSIDVN-GGNRKTI 201 (316)
T ss_dssp SCSCEEEEE-EETTTTEEEEEETTTTEEEEEETT-SCSCEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCeEEEEecC-CCceEEE
Confidence 234577898 99877766554 456789999987 4333333
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=0.0043 Score=57.31 Aligned_cols=222 Identities=7% Similarity=-0.056 Sum_probs=131.6
Q ss_pred ceeEEEec-C---CeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCC-----eEEEEECCCCce
Q 014590 114 GVDQCRMK-R---GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGT-----RICIWRRNGLRS 184 (422)
Q Consensus 114 ~v~~v~~~-~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~i~~w~~~~~~~ 184 (422)
....+++. + +.|+.+...+.|+.+|..+++.............++++++++.+++...+ .+...+......
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 45678884 2 56666655589999999888776655544556779999999954555422 233333322211
Q ss_pred ---eeecCCCceeeeEEEeeeCCeEE-EecCCCeEEEEeCCCcceeeee-ec-CCccEEEEEecCC-C-EEEEEcCCCcE
Q 014590 185 ---VFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKCSQII-RM-HCAPVTSLSLSED-Q-LIISGSSLGSI 256 (422)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~-~~-~~~~v~~l~~~~~-~-~l~s~~~dg~i 256 (422)
.+.. ......+++.+....|+ +-..++.|+.+|..++.....+ .. ....-..++++|+ + ++++-...+.|
T Consensus 220 ~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 220 ERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1111 11122355555333344 4456778999998877652222 21 1122346999987 5 55555667889
Q ss_pred EEEeCC--CCccc------------------------cceEeEEE---------ecCCCEEEEEeCCCeEEEEECCCCee
Q 014590 257 AISGLS--SDQRL------------------------TGIKTLCY---------NPCSRLVFAGTTAGYASCWDLRTMKS 301 (422)
Q Consensus 257 ~iwd~~--~~~~~------------------------~~v~~~~~---------~~~~~~l~~g~~dg~i~iwd~~~~~~ 301 (422)
..++.. ++... .....+++ .++|++.++-..++.|+.++. ++..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 998764 22110 34667888 677777777777888999985 4543
Q ss_pred eeeeccC------------------CCceeeeeeEe-cCCCEEEEEecCCeEEEEECC
Q 014590 302 LWETRIS------------------PNVVYSLQHLQ-NDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 302 ~~~~~~~------------------~~~v~~l~~~s-~~~~~l~s~~~dg~v~vwd~~ 340 (422)
. ++.+. -.....|+ ++ +++.++++-..++.|+.++++
T Consensus 377 ~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 T-TYAGRGNSREWGYVDGELRSQALFNHPTSIA-YDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp E-EEECCCTTCSSCCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEEEC
T ss_pred E-EEEeCCCCCccccCCCccccccEeCCCcEEE-EECCCCEEEEEeCCCCEEEEEecC
Confidence 3 22221 12256677 77 566655555566777777653
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.12 E-value=0.0051 Score=56.22 Aligned_cols=182 Identities=8% Similarity=-0.034 Sum_probs=111.6
Q ss_pred eEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE-EEecCCCeEEEEeCCCc----ceeeeeecCCccEEEE
Q 014590 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSL 239 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~l 239 (422)
+|+.+....|+..++++...............+++......| ++-...+.|+.+++... .....+.........+
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred eeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 455666788999998876533222222222345555545554 44456678888888642 2222233233456788
Q ss_pred EecC-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC--CCeEEEEECCCCeeeeeeccC
Q 014590 240 SLSE-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT--AGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 240 ~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~~ 308 (422)
++.+ + +++++-...+.|.+.++...... .....++++|.+.+|+.... .+.|...++............
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~ 244 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 244 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC
Confidence 8875 4 56666667789999998755432 56889999997777766653 367888888743322222223
Q ss_pred CCceeeeeeEecCCCEEEEE-ecCCeEEEEECCCCceEEEe
Q 014590 309 PNVVYSLQHLQNDTSTLVVG-GIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~ 348 (422)
-...+.|+ +++++..|+.+ +..+.|..+|+. |.....+
T Consensus 245 l~~P~gla-vd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~ 283 (400)
T 3p5b_L 245 IQWPNGIT-LDLLSGRLYWVDSKLHSISSIDVN-GGNRKTI 283 (400)
T ss_dssp CSCEEEEE-EETTTTEEEEEETTTTEEEEEETT-SCCCEEE
T ss_pred CCceEEEE-EEeCCCEEEEEECCCCEEEEEeCC-CCccEEE
Confidence 35678898 99877766655 456789999986 4333333
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.08 E-value=0.0016 Score=57.36 Aligned_cols=130 Identities=8% Similarity=0.153 Sum_probs=90.9
Q ss_pred EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-C-------EEEEEcC---CCcEEEEeC--CCCccc-----
Q 014590 206 AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-------LIISGSS---LGSIAISGL--SSDQRL----- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~-------~l~s~~~---dg~i~iwd~--~~~~~~----- 267 (422)
++.....+-+.+||+ +|+.++.+.. +.++.+..-|+ . ++++... +++|.+|++ .++...
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~ 119 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP 119 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc
Confidence 566667789999999 8998888753 56777777664 1 3333333 578999966 333221
Q ss_pred --------cceEeEEE--ecC-CC-EEEEEeCCCeEEEEECC-------CCeeeeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 268 --------TGIKTLCY--NPC-SR-LVFAGTTAGYASCWDLR-------TMKSLWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 --------~~v~~~~~--~~~-~~-~l~~g~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
..+..+|+ +|. +. ++++...+|.+..|++. +.+.++++... +.+-.+. ..+....|+.+
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~Egcv-vDd~~g~Lyv~ 197 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMA-ADDEYGRLYIA 197 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEE-EETTTTEEEEE
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEE-EcCCCCeEEEe
Confidence 23445777 664 43 68888899999999883 34667777654 4567777 88888899999
Q ss_pred ecCCeEEEEECC
Q 014590 329 GIDGVLRVLDQN 340 (422)
Q Consensus 329 ~~dg~v~vwd~~ 340 (422)
-++..|..++.+
T Consensus 198 eEd~GIw~~da~ 209 (355)
T 3amr_A 198 EEDEAIWKFSAE 209 (355)
T ss_dssp ETTTEEEEEECS
T ss_pred cccceEEEEeCC
Confidence 998777666754
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.06 E-value=0.004 Score=57.52 Aligned_cols=222 Identities=8% Similarity=-0.009 Sum_probs=128.5
Q ss_pred ceeEEEec--C-CeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-EecC-C----eEEEEECCCCce
Q 014590 114 GVDQCRMK--R-GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG-T----RICIWRRNGLRS 184 (422)
Q Consensus 114 ~v~~v~~~--~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-~----~i~~w~~~~~~~ 184 (422)
....++++ + +.|+.+...+.|+.+|+++++.............++++++++.|+ +... + .+...+......
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 44677885 3 466666655889999998877655555445566799999999665 4431 1 344444433221
Q ss_pred ---eeecCCCceeeeEEEee-eCCeEEEecCCCeEEEEeCCCcceeeeeec-CCccEEEEEecCC-C-EEEEEcCCCcEE
Q 014590 185 ---VFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRM-HCAPVTSLSLSED-Q-LIISGSSLGSIA 257 (422)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~-~-~l~s~~~dg~i~ 257 (422)
.+.. ......+++.+ .+..+++-..++.|..++..++........ .......++++|+ + ++++-...+.|.
T Consensus 218 ~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 218 VITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1211 11123455666 333355555678899999876654222221 1234678999987 6 555556778899
Q ss_pred EEeCCC--Ccc-----c-------------------cceE-eEEEe--------cCCCEEEEEeCCCeEEEEECCCCeee
Q 014590 258 ISGLSS--DQR-----L-------------------TGIK-TLCYN--------PCSRLVFAGTTAGYASCWDLRTMKSL 302 (422)
Q Consensus 258 iwd~~~--~~~-----~-------------------~~v~-~~~~~--------~~~~~l~~g~~dg~i~iwd~~~~~~~ 302 (422)
.++... +.. + .... .++.. ++|.+.++-..++.|+.++. +++..
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 987642 111 0 1223 44443 33555555556778888884 45433
Q ss_pred eeeccC------------------CCceeeeeeEecC-CCEEEEEecCCeEEEEECC
Q 014590 303 WETRIS------------------PNVVYSLQHLQND-TSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 303 ~~~~~~------------------~~~v~~l~~~s~~-~~~l~s~~~dg~v~vwd~~ 340 (422)
++.+. -.....++ ++++ +.++++-..+..|+.++++
T Consensus 375 -~~~g~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 375 -TFAGRGSNGTSGYNDGDLRQEARFNHPEGIV-YDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -EEEECCTTSSSSCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -EEEeCCCCCCCcccCCCchhhcEeCCCcEEE-EECCCCEEEEEECCCCeEEEEccC
Confidence 22211 11467787 8884 5555555567778777653
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.04 E-value=0.014 Score=58.13 Aligned_cols=223 Identities=12% Similarity=0.051 Sum_probs=135.3
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCc-----eeeecCCCceeee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLR-----SVFPSREGTFMKG 196 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~-----~~~~~~~~~~~~~ 196 (422)
+|+.+. ...|+..++........+........+++.+.+..|+ +. ..+.|+.+++.+.. ..+..........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred cccccc-ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 444333 3568888887665555555555666789998766665 43 45788888887531 1222212222346
Q ss_pred EEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-C-CCcEEEEeCCCCccc-----
Q 014590 197 LCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-S-LGSIAISGLSSDQRL----- 267 (422)
Q Consensus 197 ~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~-dg~i~iwd~~~~~~~----- 267 (422)
+++.+.+.. .++-...+.|.+.++........+.........|+++|. +.|+.+. . .+.|...++......
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 777766655 455566789999998644433333333455789999975 5555543 2 367888887543332
Q ss_pred --cceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeecc--CCCceeeeeeEecCCCEEEEEecCCeEEEEECCCC
Q 014590 268 --TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRI--SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~ 342 (422)
.....|++++.+..|+.+. ..+.|..+++........+.. .-....+|+ +. .+.+.++-...+.|...|..+|
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla-v~-~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-VF-EDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE-EE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE-Ee-CCEEEEEECCCCEEEEEeCCCC
Confidence 5788999998777666664 567899999874333222222 123345666 42 3345555556788988988778
Q ss_pred ceEEEee
Q 014590 343 EVLSRCV 349 (422)
Q Consensus 343 ~~~~~~~ 349 (422)
+.+..+.
T Consensus 634 ~~~~~l~ 640 (791)
T 3m0c_C 634 SDVNLLA 640 (791)
T ss_dssp CCCEEEE
T ss_pred cceEEee
Confidence 6665553
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.99 E-value=0.00029 Score=69.47 Aligned_cols=218 Identities=13% Similarity=0.074 Sum_probs=129.4
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-E-ecCCeEEEEECCC----Cce-eeecCCCceeeeEEEeeeC
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNG----LRS-VFPSREGTFMKGLCMRYFD 203 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~i~~w~~~~----~~~-~~~~~~~~~~~~~~~~~~~ 203 (422)
.+.|+..++.+.+....+........++|.+.+..|+ + ...+.|..+++.+ ... .+..........+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 3678888888776665555555566789999877776 3 3457899999875 221 1111111112345555444
Q ss_pred CeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEc-CC-CcEEEEeCCCCccc-------cceEe
Q 014590 204 PEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SL-GSIAISGLSSDQRL-------TGIKT 272 (422)
Q Consensus 204 ~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~-~d-g~i~iwd~~~~~~~-------~~v~~ 272 (422)
..| ++-...+.|.+.++........+.........++++|. +.|+.+. .. +.|..+++...... .....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 444 44456788999998654433333322234567888874 4444433 22 67888776432211 55778
Q ss_pred EEEecCCCEEEE-EeCCCeEEEEECCCCeeeeeec--cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEee
Q 014590 273 LCYNPCSRLVFA-GTTAGYASCWDLRTMKSLWETR--ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCV 349 (422)
Q Consensus 273 ~~~~~~~~~l~~-g~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 349 (422)
|+++|++..|+. -...+.|..+++........+. ........|+ +..+ .++++....+.|..++..+|+.+..+.
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla-vd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-VFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE-EETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE-EECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 999987655554 4466789999987432221111 1123345666 5433 455566667899999988888877765
Q ss_pred e
Q 014590 350 M 350 (422)
Q Consensus 350 ~ 350 (422)
.
T Consensus 623 ~ 623 (699)
T 1n7d_A 623 E 623 (699)
T ss_dssp T
T ss_pred c
Confidence 4
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.98 E-value=0.005 Score=52.03 Aligned_cols=188 Identities=9% Similarity=0.064 Sum_probs=121.0
Q ss_pred EEeeccccceeEEEec-C-C-eEEEEecCCeEEEEEcCCCeEEEeeeCC--CceeeEEEecCCCeEEE-ecCCeEEEEEC
Q 014590 106 DQWKAHSVGVDQCRMK-R-G-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIVG-LIGTRICIWRR 179 (422)
Q Consensus 106 ~~l~~H~~~v~~v~~~-~-~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~-~~~~~i~~w~~ 179 (422)
+.+.|=.+.+..+++. + + ++++...++.|...|.. ++.+..+... ....-+++.+++.++++ -.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4566766789999994 4 4 55567778999999998 8888887543 34555788888876564 35678888887
Q ss_pred CCCce--e---ee-----cCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC---Ccceeeeee-------cCCccEEEE
Q 014590 180 NGLRS--V---FP-----SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY---SRKCSQIIR-------MHCAPVTSL 239 (422)
Q Consensus 180 ~~~~~--~---~~-----~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~-------~~~~~v~~l 239 (422)
..... . .. ...+.....+++.+.+..|+++.......+|... ....+..+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 1 11 1122233577777777777777665555555543 111122221 123356889
Q ss_pred EecCC--CEEEEEcCCCcEEEEeCCCCccc----------------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 240 SLSED--QLIISGSSLGSIAISGLSSDQRL----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 240 ~~~~~--~~l~s~~~dg~i~iwd~~~~~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
+++|. ++++.....+.+..+|.. ++.+ .....|+|.++|+ |+..++-+.++.+..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence 99975 466666677778888865 3333 3678999999998 445577777777754
No 285
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.00081 Score=59.39 Aligned_cols=179 Identities=9% Similarity=0.062 Sum_probs=108.0
Q ss_pred CCeEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEe-----cCCCeEEE--ecCCeEEEEECCCCceeeecCCCcee
Q 014590 122 RGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD-----FDESKIVG--LIGTRICIWRRNGLRSVFPSREGTFM 194 (422)
Q Consensus 122 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~--~~~~~i~~w~~~~~~~~~~~~~~~~~ 194 (422)
++.++.++.||.|.-.|.++|+.+..++.......+... .++..++. +.||.+..++..++...+.......+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 348899999999999999999999998765111122211 12334444 57999999998877544322111111
Q ss_pred ee--EEEe-----------eeCCeEEEecCCCeEEEEeCCCcceeeeeecCC--cc-----EEEEE---e---cCCCEEE
Q 014590 195 KG--LCMR-----------YFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC--AP-----VTSLS---L---SEDQLII 248 (422)
Q Consensus 195 ~~--~~~~-----------~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~-----v~~l~---~---~~~~~l~ 248 (422)
.. +... ..+..+++|+.+|.+...|+.+|+.+..+.... +. ..|.. + ..++.++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 00 1100 034458899999999999999999999886321 10 11111 1 1135677
Q ss_pred EEcCCCcEEEEeCCCCccccceEeEEE---------------ecCCCEEEEEeCCCeEEEEECCCCeeee
Q 014590 249 SGSSLGSIAISGLSSDQRLTGIKTLCY---------------NPCSRLVFAGTTAGYASCWDLRTMKSLW 303 (422)
Q Consensus 249 s~~~dg~i~iwd~~~~~~~~~v~~~~~---------------~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 303 (422)
.+..+..+.+.+ ++|+ .-...--.+ +.|+.+ +.++.||.|.-+|..+|+.++
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 776666666666 4443 311111111 123555 557889999999999998876
No 286
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.94 E-value=3e-06 Score=75.93 Aligned_cols=48 Identities=33% Similarity=0.582 Sum_probs=42.5
Q ss_pred CCccccccCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHH
Q 014590 20 PRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLL 67 (422)
Q Consensus 20 ~~~~~~~Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 67 (422)
+...+..||+|++.+||+||+..++.++++|||+|+.++.+..+|+.+
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~l 52 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSEE
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhheee
Confidence 456789999999999999999999999999999999999888888643
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.93 E-value=0.011 Score=53.38 Aligned_cols=215 Identities=15% Similarity=0.201 Sum_probs=143.2
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCc---eeeecCC---CceeeeE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR---SVFPSRE---GTFMKGL 197 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~---~~~~~~~---~~~~~~~ 197 (422)
.+|.=. ..++.|+|+++.+.++.+..++.+....|-.+ +.|+--.+..|+.|++++.. .++..+. +..+-..
T Consensus 79 iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY 156 (494)
T 1bpo_A 79 VIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINY 156 (494)
T ss_dssp CEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEE
T ss_pred EEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEE
Confidence 344333 68999999999999999999888877777644 45555567889999997532 3444332 2222222
Q ss_pred EEeeeCCe-EEEec------CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC----CEEEEEcC---CCcEEEEeCCC
Q 014590 198 CMRYFDPE-AVVGC------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED----QLIISGSS---LGSIAISGLSS 263 (422)
Q Consensus 198 ~~~~~~~~-l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~----~~l~s~~~---dg~i~iwd~~~ 263 (422)
..+.+.+. +++|- -.|.+.+|..+ .+.-+.+++|.+....+.+..+ ..++.+.. .+.+++.++..
T Consensus 157 ~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~ 235 (494)
T 1bpo_A 157 RTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (494)
T ss_dssp EECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSC
T ss_pred EECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCC
Confidence 22333333 33332 24788899985 4556778889877777666422 34554443 37899999854
Q ss_pred C---ccc----------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCE
Q 014590 264 D---QRL----------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTST 324 (422)
Q Consensus 264 ~---~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~ 324 (422)
. ... +-..++..++....+..-+.-|.|++||+.++.++..-+.....|..-+ ......=
T Consensus 236 ~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~-~~~~~~G 314 (494)
T 1bpo_A 236 PPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA-PHEATAG 314 (494)
T ss_dssp CCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE-EETTTTE
T ss_pred CccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEec-ccCCCCc
Confidence 3 111 5567888889889999999999999999999999988777777776655 4444444
Q ss_pred EEEEecCCeEEEEECCCC
Q 014590 325 LVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~ 342 (422)
++.-...|.|.--.+...
T Consensus 315 i~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 315 IIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEETTCEEEEEEECTT
T ss_pred EEEEccCceEEEEEEccc
Confidence 555557777666655543
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.93 E-value=0.0093 Score=52.54 Aligned_cols=173 Identities=8% Similarity=0.009 Sum_probs=103.7
Q ss_pred EEEecCCeEEEEECCCCce--eeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCccee-eeeecCCccEEEEEe
Q 014590 166 IVGLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCS-QIIRMHCAPVTSLSL 241 (422)
Q Consensus 166 l~~~~~~~i~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~l~~ 241 (422)
|+-+....|+..++++... ............+.+...... .++-...+.|..+++..+... ..+...-.....+++
T Consensus 7 ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glav 86 (318)
T 3sov_A 7 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 86 (318)
T ss_dssp EEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEE
T ss_pred EEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEE
Confidence 4445567788888877531 111111111123344443444 455566788988988765321 122222234557777
Q ss_pred cC-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEe--CCCeEEEEECCCCeeeeee-ccCC
Q 014590 242 SE-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGT--TAGYASCWDLRTMKSLWET-RISP 309 (422)
Q Consensus 242 ~~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~--~dg~i~iwd~~~~~~~~~~-~~~~ 309 (422)
.+ + .++++-...+.|.++++...... .....++++|.+..|+... ..+.|...++.. .....+ ...-
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l 165 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEI 165 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSC
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCC
Confidence 74 3 45566667788999998643322 5678999999777776665 357888888763 322222 2223
Q ss_pred CceeeeeeEecCCCEEEEE-ecCCeEEEEECC
Q 014590 310 NVVYSLQHLQNDTSTLVVG-GIDGVLRVLDQN 340 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~ 340 (422)
...+.|+ +++++..|+.+ +..+.|..+|+.
T Consensus 166 ~~Pngla-vd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 166 YWPNGLT-LDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SCEEEEE-EETTTTEEEEEETTTTEEEEEETT
T ss_pred CCccEEE-EeccCCEEEEEECCCCEEEEEcCC
Confidence 4567898 99876665554 457889999986
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.93 E-value=0.012 Score=54.24 Aligned_cols=239 Identities=9% Similarity=-0.055 Sum_probs=128.4
Q ss_pred eeEEEecC---CCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCC-----eEEEEeCCCcce-
Q 014590 155 SLVDFDFD---ESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG-----TARVFDMYSRKC- 225 (422)
Q Consensus 155 ~~~~~~~~---~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~- 225 (422)
..++++++ +..+++...+.|+.++..++..............+++...+. |+.+...+ .+...+...+..
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeec
Confidence 45888884 444445545889999997766433222333344566666666 44443311 233333221111
Q ss_pred eeeeecCCccEEEEEecC-CC-EEEEEcCCCcEEEEeCCCCccc---------cceEeEEEecCCCEEEEE-eCCCeEEE
Q 014590 226 SQIIRMHCAPVTSLSLSE-DQ-LIISGSSLGSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAG-TTAGYASC 293 (422)
Q Consensus 226 ~~~~~~~~~~v~~l~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g-~~dg~i~i 293 (422)
...+. .......++++| +. ++++-..++.|+.+|..++... .....++++|+|++|+.+ ...+.|..
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 01111 122345678887 54 4445556788999998866551 223469999999955555 45688999
Q ss_pred EECC--CCee--eeeeccC---------------CCceeeeeeE---------ecCCCEEEEEecCCeEEEEECCCCceE
Q 014590 294 WDLR--TMKS--LWETRIS---------------PNVVYSLQHL---------QNDTSTLVVGGIDGVLRVLDQNTGEVL 345 (422)
Q Consensus 294 wd~~--~~~~--~~~~~~~---------------~~~v~~l~~~---------s~~~~~l~s~~~dg~v~vwd~~~~~~~ 345 (422)
++.. ++.. ...+.+. -.....++ + .+++.+.++-..++.|+.++. +|. +
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~gia-v~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v 376 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGI-FVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-V 376 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEE-EEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-E
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEE-EEccccccccCCCCcEEEEECCCCEEEEECC-CCC-E
Confidence 8865 2321 1122111 12245576 6 566666666667778888874 453 3
Q ss_pred EEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEec---CEEEEEEeCCCeEEEEEcc
Q 014590 346 SRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVG---MKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 346 ~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~---~~~l~s~s~Dg~i~iW~~~ 416 (422)
.++.+... ....|..||.. .. ...-.....|+++ +.++++=...+.|+..+++
T Consensus 377 ~t~~G~g~--~~~~G~~dG~~--------~~--------~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 TTYAGRGN--SREWGYVDGEL--------RS--------QALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECCCT--TCSSCCBCEET--------TT--------TCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCC--CCccccCCCcc--------cc--------ccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 34433211 00011112110 00 0001245677774 6777777778888888764
No 290
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.93 E-value=0.0071 Score=51.09 Aligned_cols=183 Identities=8% Similarity=-0.023 Sum_probs=109.5
Q ss_pred eeeEEEecCCCeEE--EecCCeEEEEECCCCceeeec--CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcce---e
Q 014590 154 ASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPS--REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC---S 226 (422)
Q Consensus 154 ~~~~~~~~~~~~l~--~~~~~~i~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~ 226 (422)
..-++++|+++.|+ ...++.|...|.. ++.+... ....-...+++...+..+++.-.++.+.++++..... +
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~ 107 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKIL 107 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeee
Confidence 44599999887766 5567788888887 4432211 1112223445544444445555667888888754432 2
Q ss_pred eeee------cCCccEEEEEecCC-CEEEEEcCCCcEEEEeCCC---Cccc--------------cceEeEEEecCC-CE
Q 014590 227 QIIR------MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS---DQRL--------------TGIKTLCYNPCS-RL 281 (422)
Q Consensus 227 ~~~~------~~~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~---~~~~--------------~~v~~~~~~~~~-~~ 281 (422)
.... ........++++|. +.|+++.......+|.+.. ...+ ..+.+++++|.. .+
T Consensus 108 ~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~l 187 (255)
T 3qqz_A 108 KKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTL 187 (255)
T ss_dssp EEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEE
T ss_pred eeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeE
Confidence 2221 12344689999986 5666665554444544431 1001 467899999865 45
Q ss_pred EEEEeCCCeEEEEECCCCeeeeeeccCC---------CceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 282 VFAGTTAGYASCWDLRTMKSLWETRISP---------NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 282 l~~g~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++....+..|..+|.. ++.+..+.... ...-.|+ ++++|+ |+..++.+.+++|.-.
T Consensus 188 liLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia-~d~~G~-lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 188 LVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVA-MDASGN-IYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp EEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEE-ECTTCC-EEEEETTTEEEEEEC-
T ss_pred EEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeE-ECCCCC-EEEEcCCceEEEEEec
Confidence 5566677888999976 55554443221 2557888 999998 4445777777777643
No 291
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.93 E-value=0.0085 Score=51.90 Aligned_cols=205 Identities=11% Similarity=0.097 Sum_probs=117.8
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEec
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGC 210 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (422)
+..|.|-|+.++....+.... ..+.-++|..+.++--...++.++|+++...+-...-.. .++-|.+.++..+.--
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~--AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e--~VvfWkWis~~~L~lV 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS--ADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALV 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC--CSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSS--CEEEEEECSSSEEEEE
T ss_pred CCEEEEEECCCCCCccccccc--cceeeeCCCccEEEEecCCeEEEechHHhhhhcceecCC--ccEEEEecCCCeEEEE
Confidence 347888898876554333322 223445888888884458899999999987653322222 3566777666622222
Q ss_pred CCCeEEEEeCCCc-ceeeeeecCC----ccEEEEEecCC-CE--------------------------------------
Q 014590 211 EDGTARVFDMYSR-KCSQIIRMHC----APVTSLSLSED-QL-------------------------------------- 246 (422)
Q Consensus 211 ~d~~i~iwd~~~~-~~~~~~~~~~----~~v~~l~~~~~-~~-------------------------------------- 246 (422)
.+..|+-|+++.. .+.+.+..|. ..|..-..+++ ++
T Consensus 124 T~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 124 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA 203 (365)
T ss_dssp ESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEE
T ss_pred cCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeE
Confidence 3458899988642 3444443332 12222222222 22
Q ss_pred -------------EEEEcC---CCcEEEEeCCCC---ccc----------------cceEeEEEecCCCEEEEEeCCCeE
Q 014590 247 -------------IISGSS---LGSIAISGLSSD---QRL----------------TGIKTLCYNPCSRLVFAGTTAGYA 291 (422)
Q Consensus 247 -------------l~s~~~---dg~i~iwd~~~~---~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i 291 (422)
++.+.. .+.+++-++... ... +-.-++..++....+..-+.-|.|
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~i 283 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 283 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEE
Confidence 222211 134555554221 100 344566667777788888999999
Q ss_pred EEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 292 SCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 292 ~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++||+.++.++..-+.....|..-+ ...+..=++.-...|.|.--.+.
T Consensus 284 hlyDleTgt~i~~nrIS~d~iF~ta-~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 284 HLYDLETGTCIYMNRISGETIFVTA-PHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEE-EEGGGTEEEEEETTCEEEEEEEC
T ss_pred EEEEcccCcEEEEeccCCCceEEec-ccCCCCcEEEEcCCCEEEEEEEC
Confidence 9999999999988777666666554 33333334444456655544444
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.91 E-value=0.01 Score=52.30 Aligned_cols=189 Identities=10% Similarity=0.113 Sum_probs=114.6
Q ss_pred CCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEee----eCCe----EEEecC--CCeEEEEeC--CCcceeee
Q 014590 162 DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRY----FDPE----AVVGCE--DGTARVFDM--YSRKCSQI 228 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----l~~~~~--d~~i~iwd~--~~~~~~~~ 228 (422)
....++ ....+.+.+||+ +++.+.....+.. ..+.+.+ .+.. +++.-. +++|.+|++ .+++ +..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~-nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKL-NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCE-EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCc-ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 334444 556678888888 4443322222221 1222222 1221 333333 578999966 4443 433
Q ss_pred eec------CC-ccEEEEEe--cCC-C--EEEEEcCCCcEEEEeCC---CCcc----c------cceEeEEEecCCCEEE
Q 014590 229 IRM------HC-APVTSLSL--SED-Q--LIISGSSLGSIAISGLS---SDQR----L------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 229 ~~~------~~-~~v~~l~~--~~~-~--~l~s~~~dg~i~iwd~~---~~~~----~------~~v~~~~~~~~~~~l~ 283 (422)
+.. .. ..+..+++ +|. + ++++...+|.+..|++. .+.. + +.+..+...+....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 311 11 44566777 553 3 67888888999999883 2221 1 7888999999899999
Q ss_pred EEeCCCeEEEEECC-----CCeeeeeec-cC-CCceeeeeeE-ecCCC-EEEEEe-cCCeEEEEECC-CCceEEEeeecC
Q 014590 284 AGTTAGYASCWDLR-----TMKSLWETR-IS-PNVVYSLQHL-QNDTS-TLVVGG-IDGVLRVLDQN-TGEVLSRCVMDI 352 (422)
Q Consensus 284 ~g~~dg~i~iwd~~-----~~~~~~~~~-~~-~~~v~~l~~~-s~~~~-~l~s~~-~dg~v~vwd~~-~~~~~~~~~~~~ 352 (422)
.+-++.-|..++.+ +++.+..+. ++ ...+..|+.+ .++++ +|++++ .++++.+||.. +.+.+..|....
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence 99999878888855 344554442 22 2357888722 45555 666665 67899999996 677888886543
Q ss_pred C
Q 014590 353 G 353 (422)
Q Consensus 353 ~ 353 (422)
+
T Consensus 276 ~ 276 (355)
T 3amr_A 276 G 276 (355)
T ss_dssp C
T ss_pred C
Confidence 3
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.87 E-value=0.0034 Score=62.55 Aligned_cols=226 Identities=10% Similarity=0.048 Sum_probs=123.7
Q ss_pred ceeEEEec--CC-eEEEE-ecCC----eEEEEEcCCC-eEEEe-eeCCCceeeEEEecCCCeEE-EecC-----CeEEEE
Q 014590 114 GVDQCRMK--RG-LILTG-VGDK----VMRLWSLEGY-KCVEE-YSLPNAASLVDFDFDESKIV-GLIG-----TRICIW 177 (422)
Q Consensus 114 ~v~~v~~~--~~-~l~s~-~~dg----~v~iwd~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~-~~~~-----~~i~~w 177 (422)
.+....|+ || +||-+ +.+| .|+++|+.++ +.+.. +. .....++|+||++.|+ ...+ ..|..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56667776 66 55533 3333 5999999998 63211 11 1123478999999887 5443 368888
Q ss_pred ECCCCc----eeeecCCCceeeeEEEeeeCCeEEEec---CCCeEEEEeCCCcc--e--eeeeecCCccEEEEEecCCCE
Q 014590 178 RRNGLR----SVFPSREGTFMKGLCMRYFDPEAVVGC---EDGTARVFDMYSRK--C--SQIIRMHCAPVTSLSLSEDQL 246 (422)
Q Consensus 178 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~--~--~~~~~~~~~~v~~l~~~~~~~ 246 (422)
++.++. .++............+++++..|+..+ ....|.++|+.++. . ........+...++.|+.++.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 888764 233333333334556777888765444 34578889987752 3 222333455667777666654
Q ss_pred E-EEEcCC----CcEEEEeCCCC---cc-c------cceEeEEEecCCC-EEEEEeCCCe--EEEEEC-------CCCee
Q 014590 247 I-ISGSSL----GSIAISGLSSD---QR-L------TGIKTLCYNPCSR-LVFAGTTAGY--ASCWDL-------RTMKS 301 (422)
Q Consensus 247 l-~s~~~d----g~i~iwd~~~~---~~-~------~~v~~~~~~~~~~-~l~~g~~dg~--i~iwd~-------~~~~~ 301 (422)
| +....+ ..|..+|+.++ +. + ..+..+.+ .+. ++++...++. |.++|+ .+++.
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~ 410 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTG 410 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEecccccccccCCcc
Confidence 4 444333 36777777642 23 3 13444444 444 4455666775 556665 33331
Q ss_pred eeeeccCC-CceeeeeeE----ecCCC-EEEEEecC---CeEEEEECCCCce
Q 014590 302 LWETRISP-NVVYSLQHL----QNDTS-TLVVGGID---GVLRVLDQNTGEV 344 (422)
Q Consensus 302 ~~~~~~~~-~~v~~l~~~----s~~~~-~l~s~~~d---g~v~vwd~~~~~~ 344 (422)
...+.... ..+..+. . ++++. ++++.+.. +.+..+|+.+++.
T Consensus 411 ~~~l~l~~~~~~~~~~-~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 411 LREVVMEEPIFTVHLV-ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CEECCCCCSSCEEEEC-GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred ceEECCCCceeEEEec-cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 33332111 2223332 2 34554 44444432 5678888877653
No 294
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.84 E-value=0.017 Score=53.34 Aligned_cols=142 Identities=6% Similarity=0.031 Sum_probs=87.1
Q ss_pred eeeEEEec-CCCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC-CC----eEEEEeCCCccee
Q 014590 154 ASLVDFDF-DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-DG----TARVFDMYSRKCS 226 (422)
Q Consensus 154 ~~~~~~~~-~~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~----~i~iwd~~~~~~~ 226 (422)
...++++| ++..|. +...+.|..+|+++...............+++...+..|+++.. ++ .+...+. .+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence 34588997 345554 55558899999988664322223333446677777775554443 21 3434443 33322
Q ss_pred --eeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEE-eCCCeEEE
Q 014590 227 --QIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAG-TTAGYASC 293 (422)
Q Consensus 227 --~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g-~~dg~i~i 293 (422)
..+.. ......++++| + .++++-..++.|..++...+... .....++++|+|++|+.+ ...+.|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 22221 22346778888 5 45555567789999998766541 347789999999955554 46788999
Q ss_pred EECC
Q 014590 294 WDLR 297 (422)
Q Consensus 294 wd~~ 297 (422)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 8765
No 295
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.81 E-value=0.0011 Score=66.01 Aligned_cols=125 Identities=10% Similarity=0.010 Sum_probs=73.3
Q ss_pred CeEEEEeCCCc-ceee-eeecCCccEEEEEecCC-CEEEEEcCC-----CcEEEEeCCCCccc----------cceEeEE
Q 014590 213 GTARVFDMYSR-KCSQ-IIRMHCAPVTSLSLSED-QLIISGSSL-----GSIAISGLSSDQRL----------TGIKTLC 274 (422)
Q Consensus 213 ~~i~iwd~~~~-~~~~-~~~~~~~~v~~l~~~~~-~~l~s~~~d-----g~i~iwd~~~~~~~----------~~v~~~~ 274 (422)
..|+++|+.++ +.+. .+. .....++|+|+ +.|+....| ..|..+++.++... .....+.
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 277 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMY 277 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEE
T ss_pred EEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEE
Confidence 46999999888 6321 111 11346789887 566655554 36888888765421 2356788
Q ss_pred EecCCCEEEEEeC---CCeEEEEECCCCe-ee--eeec-cCCCceeeeeeEecCCCEEEEEecC----CeEEEEECCC
Q 014590 275 YNPCSRLVFAGTT---AGYASCWDLRTMK-SL--WETR-ISPNVVYSLQHLQNDTSTLVVGGID----GVLRVLDQNT 341 (422)
Q Consensus 275 ~~~~~~~l~~g~~---dg~i~iwd~~~~~-~~--~~~~-~~~~~v~~l~~~s~~~~~l~s~~~d----g~v~vwd~~~ 341 (422)
|+|||++|+.... ...|+++|+.++. .. ..+. ......+++. ++.++.+++....+ ..|..+|+.+
T Consensus 278 ~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~-~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 278 KAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ-MHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE-EETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe-eeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 9999999887663 4468889998752 12 2332 2334445544 43333344444333 3566667654
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.77 E-value=0.054 Score=56.38 Aligned_cols=106 Identities=9% Similarity=0.148 Sum_probs=65.4
Q ss_pred ceeEEEecCCeEEEEecCCeEEEEEcCCCeE--EEeeeCCCceeeEEEecCC------CeEE-Eec-CCeEEEEECCCCc
Q 014590 114 GVDQCRMKRGLILTGVGDKVMRLWSLEGYKC--VEEYSLPNAASLVDFDFDE------SKIV-GLI-GTRICIWRRNGLR 183 (422)
Q Consensus 114 ~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~------~~l~-~~~-~~~i~~w~~~~~~ 183 (422)
.|...+..+.+++.++ ++.+.++++..++. .........+.++++.+.+ ..++ +.. |++++++++.+.+
T Consensus 515 ~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 515 NISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp CCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 5666666566555554 67888888876542 3334445667778877632 4566 775 9999999998765
Q ss_pred eeeec-CC-CceeeeEEEeeeC--CeEEEecCCCeEEEEeC
Q 014590 184 SVFPS-RE-GTFMKGLCMRYFD--PEAVVGCEDGTARVFDM 220 (422)
Q Consensus 184 ~~~~~-~~-~~~~~~~~~~~~~--~~l~~~~~d~~i~iwd~ 220 (422)
.+... .. ......+++...+ ++|..|-.||.+.-+.+
T Consensus 594 ~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 594 LLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp EEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred eEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 44221 11 1233344444443 34888889998765443
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.74 E-value=0.016 Score=50.51 Aligned_cols=208 Identities=10% Similarity=-0.021 Sum_probs=107.8
Q ss_pred CeEEEEEcCCCeEEEeeeCCCc-eeeEEEecCCCeEE-EecC-----CeEEEEECCCCc---ee-eecCCCceeeeEEEe
Q 014590 132 KVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIG-----TRICIWRRNGLR---SV-FPSREGTFMKGLCMR 200 (422)
Q Consensus 132 g~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~-----~~i~~w~~~~~~---~~-~~~~~~~~~~~~~~~ 200 (422)
..+.++|+.+.+....-..+.. ....+...++..++ ++.+ ..+.+||..+.. -. ............+..
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 4688999988765543222222 12233334555555 5433 468999988766 22 211111111112222
Q ss_pred eeCCeEEEecCC-----CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCccc-
Q 014590 201 YFDPEAVVGCED-----GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSL-----GSIAISGLSSDQRL- 267 (422)
Q Consensus 201 ~~~~~l~~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~- 267 (422)
..+..++.|+.+ ..+.+||+.+.+-.. .+...... .+++...+.+++.|+.+ ..+..||+.+.+-.
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 233345556543 468899987765322 22211111 12233355677777654 45888998776543
Q ss_pred ------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCeee--eeeccCCCceeeeeeEecCCCEEEEEecC---
Q 014590 268 ------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKSL--WETRISPNVVYSLQHLQNDTSTLVVGGID--- 331 (422)
Q Consensus 268 ------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~s~~~~~l~s~~~d--- 331 (422)
......+..-++..++.|+.+ ..+.+||+.+.+-. ..+....... ++ ...+++.++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~--~~~~~~i~v~GG~~~~~ 266 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV-GA--TVLRGRLYAIAGYDGNS 266 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EE--EEETTEEEEECCBCSSS
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccce-eE--EEECCEEEEEcCcCCCc
Confidence 111111122266777777753 46899999875432 2221111111 22 22467777777765
Q ss_pred --CeEEEEECCCCc
Q 014590 332 --GVLRVLDQNTGE 343 (422)
Q Consensus 332 --g~v~vwd~~~~~ 343 (422)
..+.+||..+.+
T Consensus 267 ~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 267 LLSSIECYDPIIDS 280 (301)
T ss_dssp BEEEEEEEETTTTE
T ss_pred ccccEEEEcCCCCe
Confidence 467888987654
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.72 E-value=0.048 Score=54.29 Aligned_cols=182 Identities=8% Similarity=-0.036 Sum_probs=107.6
Q ss_pred eEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCc----ceeeeeecCCccEEEE
Q 014590 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSL 239 (422)
Q Consensus 165 ~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~l 239 (422)
.|+.+....|+..++.................+++...... +++-...+.|+.+++... .....+.........|
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL 476 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 476 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence 34455566788887776543221111122224444443444 445555678888887642 2222333233445678
Q ss_pred EecC-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC--CCeEEEEECCCCeeeeeeccC
Q 014590 240 SLSE-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT--AGYASCWDLRTMKSLWETRIS 308 (422)
Q Consensus 240 ~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~~ 308 (422)
++.+ + +++++-...+.|.+.++...... .....|+++|.+.+|+.... .+.|...++........+...
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~ 556 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 556 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC
Confidence 8874 3 56666677889999998754432 56889999998766666653 367999988743333223333
Q ss_pred CCceeeeeeEecCCCEEEEE-ecCCeEEEEECCCCceEEEe
Q 014590 309 PNVVYSLQHLQNDTSTLVVG-GIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 309 ~~~v~~l~~~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~ 348 (422)
-.....|+ +++.+..|+.+ ...+.|...++. |.....+
T Consensus 557 l~~P~GLa-vD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v 595 (791)
T 3m0c_C 557 IQWPNGIT-LDLLSGRLYWVDSKLHSISSIDVN-GGNRKTI 595 (791)
T ss_dssp CSCEEEEE-EETTTTEEEEEETTTTEEEEEETT-SCSCEEE
T ss_pred CCCceEEE-EecCCCeEEEEeCCCCcEEEEecC-CCceEEE
Confidence 35678898 98777766655 456789999986 4433333
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.72 E-value=0.019 Score=50.13 Aligned_cols=143 Identities=10% Similarity=0.017 Sum_probs=96.3
Q ss_pred EEEeeeCCeEEEec-CCCeEEEEeCCCcceeee-eec----CC--ccEEEEEe---cCCC-EEEEEc-------------
Q 014590 197 LCMRYFDPEAVVGC-EDGTARVFDMYSRKCSQI-IRM----HC--APVTSLSL---SEDQ-LIISGS------------- 251 (422)
Q Consensus 197 ~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~-~~~----~~--~~v~~l~~---~~~~-~l~s~~------------- 251 (422)
..|......++.++ ..++|..||...+..... +.. .. ..+..|.+ .|++ ++++..
T Consensus 18 ~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~ 97 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSH 97 (334)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSS
T ss_pred ccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccC
Confidence 34444344455554 789999999975543333 221 11 13578999 5664 444332
Q ss_pred CCCcEEEEeCC---CCccc----------c----------ceEeEEEecCCCEEEEEeCC-CeEEEEECCCCeeeeeec-
Q 014590 252 SLGSIAISGLS---SDQRL----------T----------GIKTLCYNPCSRLVFAGTTA-GYASCWDLRTMKSLWETR- 306 (422)
Q Consensus 252 ~dg~i~iwd~~---~~~~~----------~----------~v~~~~~~~~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~- 306 (422)
.+..+..+|+. +++.+ . ....++..++|+..++++.. +.|...+.... .+..+.
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~ 176 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAW 176 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEE
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeee
Confidence 25779999998 77665 2 47789999999999999888 88888887633 222221
Q ss_pred -----cCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 307 -----ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 307 -----~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
......+.|+ +.|+|+.|++...+|.+..+|+.+
T Consensus 177 ~~~~~~~~~G~nGIv-~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 177 ESGNGGQRPGYSGIT-FDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCCCSSSCCSCSEEE-EETTTTEEEEESSSSSEEEEECSS
T ss_pred cCCCcccccCcceEE-EeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1112367888 999999888887799999999873
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.72 E-value=0.041 Score=53.40 Aligned_cols=221 Identities=11% Similarity=0.059 Sum_probs=137.5
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeC--CCceeeEEEecCCCeEE-Ee-cCCeEEEEECCCCcee-eecCCCceeeeEE
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSL--PNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLRSV-FPSREGTFMKGLC 198 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~ 198 (422)
+|+.+ ..+.|+..++++......+.. -.....++|++.+..++ +. .++.|..+++++.... .....-.....++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 44443 457899999987654433332 23456699999877776 43 4688999998765422 2221212234677
Q ss_pred EeeeCCeE-EEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC--CCcEEEEeCCCCccc------c
Q 014590 199 MRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS--LGSIAISGLSSDQRL------T 268 (422)
Q Consensus 199 ~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~--dg~i~iwd~~~~~~~------~ 268 (422)
+.+.+..| ++-...+.|.+.++........+...-.....++++|. +.++.+.. .+.|...++...... .
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~ 166 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVG 166 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCS
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCC
Confidence 77666654 45556788999998644322222233345689999974 55555542 467777776543322 6
Q ss_pred ceEeEEEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEE
Q 014590 269 GIKTLCYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSR 347 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 347 (422)
....++++++++.|+.+. ..+.|..+|+..... ..+...-....+++ +.. +...++-...+.|...|..+|+....
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gla-v~~-~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLT-QYQ-DYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEE-EET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEE-EEC-CEEEEecCCCCEEEEEECCCCCceEE
Confidence 788999999877666665 567899999875433 23333334456787 543 45555555688999999877765444
Q ss_pred e
Q 014590 348 C 348 (422)
Q Consensus 348 ~ 348 (422)
+
T Consensus 244 l 244 (628)
T 4a0p_A 244 I 244 (628)
T ss_dssp E
T ss_pred E
Confidence 4
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.66 E-value=0.02 Score=49.97 Aligned_cols=217 Identities=9% Similarity=0.004 Sum_probs=112.7
Q ss_pred eEEEEec--CCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecC----CeEEEEECCCCcee-eecCCCcee
Q 014590 124 LILTGVG--DKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIG----TRICIWRRNGLRSV-FPSREGTFM 194 (422)
Q Consensus 124 ~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~----~~i~~w~~~~~~~~-~~~~~~~~~ 194 (422)
.++.|+. ...+.+||..+++....-..+... ...+...++..++ |+.+ ..+.+||..+..-. .........
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 4445554 357889999987765432222221 1222334555555 5433 67889999887632 222211111
Q ss_pred eeEEEeeeCCeEEEecCC------CeEEEEeCCCcceeee--eecCCccEEEEEecCCCEEEEEcC---------CCcEE
Q 014590 195 KGLCMRYFDPEAVVGCED------GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSEDQLIISGSS---------LGSIA 257 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~---------dg~i~ 257 (422)
...+....+..++.|+.+ ..+.+||+.+.+-... +...... .+++...+.+++.|+. -..+.
T Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 94 SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEE
T ss_pred ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEEECCEEEEECCCCCCCCcccccceEE
Confidence 122222334446666654 4688999887653222 1111111 1223335566666653 34588
Q ss_pred EEeCCCCccc-------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCee--eeeeccCCCceeeeeeEecCCC
Q 014590 258 ISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKS--LWETRISPNVVYSLQHLQNDTS 323 (422)
Q Consensus 258 iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~s~~~~ 323 (422)
+||+.+.+-. ......+..-+++.++.|+.+ ..+.+||+.+.+- +..+........++ .-+++
T Consensus 173 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~---~~~~~ 249 (306)
T 3ii7_A 173 VYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA---AVGSI 249 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE---EETTE
T ss_pred EeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE---EECCE
Confidence 9998776533 111111112266677776643 3588999887532 22222111112222 23677
Q ss_pred EEEEEecC-----CeEEEEECCCCce
Q 014590 324 TLVVGGID-----GVLRVLDQNTGEV 344 (422)
Q Consensus 324 ~l~s~~~d-----g~v~vwd~~~~~~ 344 (422)
.++.|+.+ ..+.+||..+.+-
T Consensus 250 i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 250 VYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred EEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 78888754 5688899887543
No 302
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.62 E-value=0.014 Score=50.88 Aligned_cols=214 Identities=10% Similarity=0.068 Sum_probs=108.7
Q ss_pred eEEEEecC----CeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-EecC-----CeEEEEECCCCcee-eecCCC
Q 014590 124 LILTGVGD----KVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIG-----TRICIWRRNGLRSV-FPSREG 191 (422)
Q Consensus 124 ~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~~-----~~i~~w~~~~~~~~-~~~~~~ 191 (422)
.++.|+.+ ..+..+|+.+.+....-..+... ...+...++..++ |+.+ ..+.+||..+.+-. ......
T Consensus 18 i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 18 MVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred EEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc
Confidence 44445432 46888998887654432222211 1122233555555 4433 46888998877632 211111
Q ss_pred ceeeeEEEeeeCCeEEEecCC-----CeEEEEeCCCcceeee--eecCCccEEEEEecCCCEEEEEcCC-------CcEE
Q 014590 192 TFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSEDQLIISGSSL-------GSIA 257 (422)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~d-------g~i~ 257 (422)
......+....+..++.|+.+ ..+.+||+.+.+-... +...... .+++...+.+++.|+.+ ..+.
T Consensus 98 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 98 RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEE
T ss_pred cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEE
Confidence 111112222234445566544 3577899877653222 2111111 22333355677776543 4588
Q ss_pred EEeCCCCccc---------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCeee--eeeccCCCceeeeeeEecC
Q 014590 258 ISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKSL--WETRISPNVVYSLQHLQND 321 (422)
Q Consensus 258 iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~s~~ 321 (422)
.||+.+.+-. .....+. -++..++.|+.+ ..+.+||+.+.+-. ..+...... .++ ...+
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~--~~~~ 251 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGV--CAVN 251 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEE--EEET
T ss_pred EEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeE--EEEC
Confidence 8998776533 1112222 266777777654 36889999865322 222111111 112 2246
Q ss_pred CCEEEEEecCC-----eEEEEECCCCc
Q 014590 322 TSTLVVGGIDG-----VLRVLDQNTGE 343 (422)
Q Consensus 322 ~~~l~s~~~dg-----~v~vwd~~~~~ 343 (422)
++.++.|+.++ .+.+||..+.+
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCcCCCcccccEEEEcCCCCe
Confidence 77777777653 47888887654
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.60 E-value=0.032 Score=54.01 Aligned_cols=216 Identities=13% Similarity=0.052 Sum_probs=121.4
Q ss_pred CCeEEEEEcCCCe--EEEeeeCCCceeeEEEecCCCeEE-Eec-CCeEEEEECCCCc--eeeecCCCceeeeEEEeeeCC
Q 014590 131 DKVMRLWSLEGYK--CVEEYSLPNAASLVDFDFDESKIV-GLI-GTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDP 204 (422)
Q Consensus 131 dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~~i~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 204 (422)
...|+..++.... .......-.....+++++.+..++ +.. .+.|..+++++.. .......-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4577888877542 222333344566789999877776 543 5788888887653 222222212344677777666
Q ss_pred e-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEEEEcC--CCcEEEEeCCCCccc-------cceEeE
Q 014590 205 E-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS--LGSIAISGLSSDQRL-------TGIKTL 273 (422)
Q Consensus 205 ~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~--dg~i~iwd~~~~~~~-------~~v~~~ 273 (422)
. .++-...+.|.+.++........+...-.....|+++|. +.++.+.. .+.|...++...... .....+
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 5 445566789999998643322222233345678899875 55554443 356766666432221 567899
Q ss_pred EEecCCCEEEEEe-CCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEe
Q 014590 274 CYNPCSRLVFAGT-TAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRC 348 (422)
Q Consensus 274 ~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 348 (422)
++++++..|+.+. ..+.|..+|+..........+.-....+|+ +..+ ...++-..++.|...|..+|+....+
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~-~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT-LFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEE-ESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEE-EeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 9998766666554 567799999875433222221222335666 4333 44445556788999998877654443
No 304
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.58 E-value=0.076 Score=52.93 Aligned_cols=220 Identities=15% Similarity=0.069 Sum_probs=126.0
Q ss_pred ccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeEEEeeeC-----CCceeeEEEecCCCeEEEecCCeEEEEECCCCcee
Q 014590 112 SVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL-----PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV 185 (422)
Q Consensus 112 ~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~ 185 (422)
...|.++.- ++|+|-.|..+| +..||-.. ...+.. ...+..+....++...+++. ..+..||..+..-.
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYS---TQQHFTYGENNNTRIYCGVIIDNTYLYMGTD-NGILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSC---EEECSCTTSTTSSCEEEEEEETTTEEEEEET-TEEEEEETTTTEEC
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCc---eEEEEccCCCCCceEEEEEEcCCCcEEEEeC-CCeEEEeCCCCEEE
Confidence 457889887 467777777777 55566432 222221 12233344455554445665 45889998775422
Q ss_pred eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeee----cCCccEEEEEecCCCEEEEEcCCCcEEEEeC
Q 014590 186 FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR----MHCAPVTSLSLSEDQLIISGSSLGSIAISGL 261 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~ 261 (422)
.. .......+.++......+..++.+ -+..+|..+++...... .....|.++...+++.+..|+.+ -+..+|.
T Consensus 96 ~~-~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~ 172 (758)
T 3ott_A 96 QP-ETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIP 172 (758)
T ss_dssp CC-SCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEET
T ss_pred Cc-ccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCcc
Confidence 11 111111123333345567777766 67888987665332201 12346888887766556666654 4667776
Q ss_pred CCCccc------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe
Q 014590 262 SSDQRL------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 262 ~~~~~~------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
.+++.. ..|.++...+++..|..|+.. -+..+|..+++...........|.++. ...+|.+.+ |+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~~~~~~~~~~~l~~~~i~~i~-~d~~g~lWi-gT 249 (758)
T 3ott_A 173 SNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFPSTGQIKQTEAFHNNSIKSLA-LDGNGDLLA-GT 249 (758)
T ss_dssp TTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEETTTTEEEEEEEEEEEEEEEEE-ECTTCCEEE-EE
T ss_pred CCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcCCCCeEEeccCCCCCeEEEEE-EcCCCCEEE-Ee
Confidence 654321 237788887777766667654 588899877653321111234578887 666776544 44
Q ss_pred cCCeEEEEECCCCc
Q 014590 330 IDGVLRVLDQNTGE 343 (422)
Q Consensus 330 ~dg~v~vwd~~~~~ 343 (422)
.+ -+.+++..+++
T Consensus 250 ~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 250 DN-GLYVYHNDTTP 262 (758)
T ss_dssp TT-EEEEECCTTSC
T ss_pred CC-ceeEEecCCCc
Confidence 44 48888876554
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.58 E-value=0.021 Score=49.89 Aligned_cols=169 Identities=9% Similarity=0.027 Sum_probs=86.3
Q ss_pred CCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCC----CeEEEEeCCCcceeee--eecCCccEEEEEecC
Q 014590 171 GTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCED----GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSE 243 (422)
Q Consensus 171 ~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~ 243 (422)
...+..||..+.+-. ............+....+..++.|+.+ ..+.+||+.+++-... +...... .+++...
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~ 101 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-LAACAAE 101 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-CEEEEET
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-eeEEEEC
Confidence 467888998887632 111111111122222333346666644 6788999887653222 2111111 1222335
Q ss_pred CCEEEEEcCC------CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC---------CCeEEEEECCCCee
Q 014590 244 DQLIISGSSL------GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT---------AGYASCWDLRTMKS 301 (422)
Q Consensus 244 ~~~l~s~~~d------g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~---------dg~i~iwd~~~~~~ 301 (422)
+.+++.|+.+ ..+.+||..+.+-. ......+..-+++.++.|+. -..+.+||+.+.+-
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 5677777755 46889998876533 11111111236666666653 34588999887532
Q ss_pred e--eeeccCCCceeeeeeEecCCCEEEEEecC-----CeEEEEECCCCc
Q 014590 302 L--WETRISPNVVYSLQHLQNDTSTLVVGGID-----GVLRVLDQNTGE 343 (422)
Q Consensus 302 ~--~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 343 (422)
. ..+...... .++ ...+++.++.|+.+ ..+.+||..+.+
T Consensus 182 ~~~~~~p~~r~~-~~~--~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 182 TELCPMIEARKN-HGL--VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEECCCSSCCBS-CEE--EEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EECCCccchhhc-ceE--EEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 2 111111111 112 22366777777653 357778877654
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.57 E-value=0.023 Score=49.46 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=72.6
Q ss_pred CCeEEEecCC-----CeEEEEeCCCcc---eeee--eecCCccEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCccc
Q 014590 203 DPEAVVGCED-----GTARVFDMYSRK---CSQI--IRMHCAPVTSLSLSEDQLIISGSSL-----GSIAISGLSSDQRL 267 (422)
Q Consensus 203 ~~~l~~~~~d-----~~i~iwd~~~~~---~~~~--~~~~~~~v~~l~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 267 (422)
+..++.|+.+ ..+.+||+.+++ -... +...... .+++...+.+++.|+.+ ..+.+||..+.+-.
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 3345666644 468899988765 2221 1111111 12233355677777644 35888998776533
Q ss_pred -------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCeee--eeeccCCCceeeeeeEecCCCEEEEEecC--
Q 014590 268 -------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKSL--WETRISPNVVYSLQHLQNDTSTLVVGGID-- 331 (422)
Q Consensus 268 -------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-- 331 (422)
......+...+++.++.|+.+ ..+.+||+.+.+-. ..+...... .++ ...+++.++.|+.+
T Consensus 142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~--~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSG-AGV--ALLNDHIYVVGGFDGT 218 (301)
T ss_dssp EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEE--EEETTEEEEECCBCSS
T ss_pred ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccccc-ceE--EEECCEEEEEeCCCCC
Confidence 111111122366777777654 45889998865322 112111111 112 22467777777764
Q ss_pred ---CeEEEEECCCCce
Q 014590 332 ---GVLRVLDQNTGEV 344 (422)
Q Consensus 332 ---g~v~vwd~~~~~~ 344 (422)
..+.+||+.+.+-
T Consensus 219 ~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSW 234 (301)
T ss_dssp SBCCCEEEEETTTTEE
T ss_pred cccceEEEEeCCCCcE
Confidence 4578888876543
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.50 E-value=0.00098 Score=65.68 Aligned_cols=171 Identities=8% Similarity=0.005 Sum_probs=96.4
Q ss_pred EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEe-cCCCeEEEEeCCC----cceeeeeecCCccEEEEEec
Q 014590 168 GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMYS----RKCSQIIRMHCAPVTSLSLS 242 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~ 242 (422)
.+..+.|+..++.+...............+++.+....|+.+ ...+.|+.+++.. ......+.........|++.
T Consensus 382 ~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 382 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 444567777887765533222222222345555555555444 4567888888864 22222221111234567776
Q ss_pred C-C-CEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC--CCeEEEEECCCCeeeeee-ccCCC
Q 014590 243 E-D-QLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT--AGYASCWDLRTMKSLWET-RISPN 310 (422)
Q Consensus 243 ~-~-~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~-~~~~~ 310 (422)
+ + +++++-...+.|.++++...... .....++++|.+.+|+.+.. .+.|..+++... ....+ ...-.
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~ 540 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQ 540 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCC
Confidence 3 3 45555566788999998654322 45678899987665555443 267888777632 22222 12224
Q ss_pred ceeeeeeEecCCCEE-EEEecCCeEEEEECC
Q 014590 311 VVYSLQHLQNDTSTL-VVGGIDGVLRVLDQN 340 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l-~s~~~dg~v~vwd~~ 340 (422)
..+.|+ ++|++..| ++-+..+.|.++++.
T Consensus 541 ~PnGla-vd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 541 WPNGIT-LDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SCCCEE-ECTTTCCEEEEETTTTEEEEECSS
T ss_pred CccEEE-EeccCCEEEEEecCCCeEEEEccC
Confidence 456788 88876544 455567789999886
No 308
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.49 E-value=0.047 Score=48.21 Aligned_cols=259 Identities=14% Similarity=0.040 Sum_probs=128.3
Q ss_pred ccceeEEEec-CC-eEEEEecCCeEEEEEcCCCeEEEe--eeC---CCceeeEEEecCCCeEEEecCCeEEEEECCCCce
Q 014590 112 SVGVDQCRMK-RG-LILTGVGDKVMRLWSLEGYKCVEE--YSL---PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS 184 (422)
Q Consensus 112 ~~~v~~v~~~-~~-~l~s~~~dg~v~iwd~~~~~~~~~--~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~ 184 (422)
...+.+|.|. ++ .++ ++.+|.| +...+.|+.=.. ... ......+.+.+ +..++++..+.|.. ..+.++.
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTSS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCCC
Confidence 4578899984 44 444 5667765 333343432111 111 11234466664 34444555665544 3333331
Q ss_pred --eeec---CCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeee-eecCCccEEEEEecCC-CEEEEEcCCCcEE
Q 014590 185 --VFPS---REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (422)
Q Consensus 185 --~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~-~~l~s~~~dg~i~ 257 (422)
.... ..+... .+... .+..++.++.++.|.. ....|+.-.. ...+...+..+.+.++ .+++.+ .+|.+.
T Consensus 111 W~~~~~~~~~~~~~~-~i~~~-~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~ 186 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPR-LIKAL-GNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFY 186 (327)
T ss_dssp CEECCCCTTCSSCEE-EEEEE-ETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSEE
T ss_pred ceECccccCCCCCeE-EEEEE-CCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcEE
Confidence 1111 112221 22222 2334444444554432 1223432222 2334567888999876 555554 445543
Q ss_pred E-EeC--CCCccc-----cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeecc----CCCceeeeeeEecCCCEE
Q 014590 258 I-SGL--SSDQRL-----TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRI----SPNVVYSLQHLQNDTSTL 325 (422)
Q Consensus 258 i-wd~--~~~~~~-----~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~~s~~~~~l 325 (422)
. .|- .+-+.+ ..+..+++.+++..++ ++.+|.+++.+...++.-..+.. +...+.++. +.+++..+
T Consensus 187 ~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~ 264 (327)
T 2xbg_A 187 STWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVW 264 (327)
T ss_dssp EEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEE
T ss_pred EEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEE-ecCCCEEE
Confidence 3 332 111111 5678888999887654 45678777764333443333221 223578888 77777766
Q ss_pred EEEecCCeEEEEECCCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEE
Q 014590 326 VVGGIDGVLRVLDQNTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTT 404 (422)
Q Consensus 326 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~ 404 (422)
+++. +|.| .+....|+.-..+.... .+...+.++.| ++..++.+
T Consensus 265 ~~g~-~g~i-~~S~DgG~tW~~~~~~~---------------------------------~~~~~~~~v~~~~~~~~~~~ 309 (327)
T 2xbg_A 265 LAGG-AGAL-LCSQDGGQTWQQDVDVK---------------------------------KVPSNFYKILFFSPDQGFIL 309 (327)
T ss_dssp EEES-TTCE-EEESSTTSSCEECGGGT---------------------------------TSSSCCCEEEEEETTEEEEE
T ss_pred EEeC-CCeE-EEeCCCCcccEEcCccC---------------------------------CCCCCeEEEEEECCCceEEE
Confidence 6654 6655 33444443332222110 01235677777 55567788
Q ss_pred eCCCeEEEEEc
Q 014590 405 HNSKYIRLWKF 415 (422)
Q Consensus 405 s~Dg~i~iW~~ 415 (422)
+.+|.|.-++-
T Consensus 310 G~~G~i~~~~~ 320 (327)
T 2xbg_A 310 GQKGILLRYVT 320 (327)
T ss_dssp CSTTEEEEECC
T ss_pred cCCceEEEEcC
Confidence 88998766653
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.38 E-value=0.061 Score=47.09 Aligned_cols=214 Identities=10% Similarity=0.042 Sum_probs=110.5
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEeeeCC--Cc-eeeEEEecCCCeEE-Eec-----C------CeEEEEECCCCcee-ee
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEEYSLP--NA-ASLVDFDFDESKIV-GLI-----G------TRICIWRRNGLRSV-FP 187 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l~-~~~-----~------~~i~~w~~~~~~~~-~~ 187 (422)
+++.|+ ..+.+||..+++... ...+ .. ....+...++..++ |+. . ..+..||..+.+-. ..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 455565 579999999987653 2222 12 22234445666655 552 1 12778888877632 11
Q ss_pred cCCCceeeeEEEeeeCCe-EEEecCC--------CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcC-C--
Q 014590 188 SREGTFMKGLCMRYFDPE-AVVGCED--------GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSS-L-- 253 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~-l~~~~~d--------~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~-d-- 253 (422)
....... ..+....++. ++.|+.+ ..+.+||+.+.+-.. .+...... .+++...+.+++.|+. +
T Consensus 84 ~~p~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRC-LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEE-SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCTTS
T ss_pred CCCcchh-ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEEECCEEEEEeCCCCCC
Confidence 1111111 1222223444 5555532 458899988764222 22111111 2233335667777765 2
Q ss_pred ---CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCC-----eEEEEECCCCeee--eeeccCCCceeeee
Q 014590 254 ---GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAG-----YASCWDLRTMKSL--WETRISPNVVYSLQ 316 (422)
Q Consensus 254 ---g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~~--~~~~~~~~~v~~l~ 316 (422)
..+.+||..+.+-. ......+..-+++.++.|+.++ .+.+||+.+.+-. ..+....... ++
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~- 239 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SL- 239 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EE-
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eE-
Confidence 46889998776433 1111111223667777777544 5888998875322 2221111111 22
Q ss_pred eEecCCCEEEEEecCC--------------eEEEEECCCCceE
Q 014590 317 HLQNDTSTLVVGGIDG--------------VLRVLDQNTGEVL 345 (422)
Q Consensus 317 ~~s~~~~~l~s~~~dg--------------~v~vwd~~~~~~~ 345 (422)
...+++.++.|+.++ .+.+||+.+.+-.
T Consensus 240 -~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 240 -VSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp -EEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred -EEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 224677777777542 4678888766543
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.38 E-value=0.03 Score=48.93 Aligned_cols=215 Identities=9% Similarity=-0.016 Sum_probs=110.0
Q ss_pred eEEEEec----CCeEEEEEcCCCeEEEeeeCCCce-eeEEEecCCCeEE-Eec----C-----CeEEEEECCCCcee-ee
Q 014590 124 LILTGVG----DKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLI----G-----TRICIWRRNGLRSV-FP 187 (422)
Q Consensus 124 ~l~s~~~----dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~----~-----~~i~~w~~~~~~~~-~~ 187 (422)
.++.|+. -..+.++|..+.+....-..+... ...+...++..++ |+. + ..+.+||..+..-. ..
T Consensus 27 i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 106 (308)
T 1zgk_A 27 IYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA 106 (308)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC
T ss_pred EEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC
Confidence 5555553 246889999887765432222211 1122233555554 443 2 46888998877632 11
Q ss_pred cCCCceeeeEEEeeeCCeEEEecCC-----CeEEEEeCCCcceee--eeecCCccEEEEEecCCCEEEEEcCC-----Cc
Q 014590 188 SREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSEDQLIISGSSL-----GS 255 (422)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~d-----g~ 255 (422)
..........+....+..++.|+.+ ..+.+||+.+.+-.. .+...... .+++...+.+++.|+.+ ..
T Consensus 107 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~ 185 (308)
T 1zgk_A 107 PMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG-VGVAVLNRLLYAVGGFDGTNRLNS 185 (308)
T ss_dssp CCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCC
T ss_pred CCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc-eEEEEECCEEEEEeCCCCCCcCce
Confidence 1111111112222233345555533 468889987765322 12111111 12233355677777654 45
Q ss_pred EEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCeee--eeeccCCCceeeeeeEe
Q 014590 256 IAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMKSL--WETRISPNVVYSLQHLQ 319 (422)
Q Consensus 256 i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~s 319 (422)
+..||+.+.+-. .....+.+ ++..++.|+.+ ..+.+||+.+.+-. ..+...... .++ ..
T Consensus 186 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~--~~ 260 (308)
T 1zgk_A 186 AECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA-LGI--TV 260 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEE--EE
T ss_pred EEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc-eEE--EE
Confidence 888998765533 11222222 66777777654 45899998875322 222111111 122 22
Q ss_pred cCCCEEEEEecC-----CeEEEEECCCCce
Q 014590 320 NDTSTLVVGGID-----GVLRVLDQNTGEV 344 (422)
Q Consensus 320 ~~~~~l~s~~~d-----g~v~vwd~~~~~~ 344 (422)
.+++.++.|+.+ ..+.+||+.+.+-
T Consensus 261 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 261 HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 367777777754 4578888876543
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.37 E-value=0.061 Score=46.74 Aligned_cols=166 Identities=14% Similarity=0.096 Sum_probs=83.3
Q ss_pred CeEEEEECCCCcee-eecCCCceeeeEEEeeeCCeEEEecCC-----CeEEEEeCCCcceeee--eecCCccEEEEEecC
Q 014590 172 TRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSE 243 (422)
Q Consensus 172 ~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~ 243 (422)
..+..||+.+..-. .................+..++.|+.+ ..+.+||+.+.+-... +...... .+++...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVLN 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEET
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEEC
Confidence 45778888776532 111111111111222233345666644 3588899877653221 2111111 2233335
Q ss_pred CCEEEEEcCCC-----cEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeC-------CCeEEEEECCCCeee
Q 014590 244 DQLIISGSSLG-----SIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTT-------AGYASCWDLRTMKSL 302 (422)
Q Consensus 244 ~~~l~s~~~dg-----~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~-------dg~i~iwd~~~~~~~ 302 (422)
+.+++.|+.++ .+.+||+.+.+-. ....++. -+++.++.|+. ...+.+||+.+.+-.
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 66777776553 4778888765533 1111222 25666666653 235889998865322
Q ss_pred --eeeccCCCceeeeeeEecCCCEEEEEecC-----CeEEEEECCCCc
Q 014590 303 --WETRISPNVVYSLQHLQNDTSTLVVGGID-----GVLRVLDQNTGE 343 (422)
Q Consensus 303 --~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 343 (422)
..+....... ++ ...+++.++.|+.+ ..+.+||..+.+
T Consensus 187 ~~~~~p~~r~~~-~~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 187 YIAEMSTRRSGA-GV--GVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EECCCSSCCBSC-EE--EEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ECCCCccccccc-cE--EEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 2222111111 22 22367777777764 357788877654
No 312
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.24 E-value=0.084 Score=47.13 Aligned_cols=225 Identities=11% Similarity=-0.010 Sum_probs=109.6
Q ss_pred CC-eEEEEec-CCeEEEEEcCC--CeEEEeeeCC-Cc-eeeEEEecCCCeEE-Eec----------CCeEEEEECCCCce
Q 014590 122 RG-LILTGVG-DKVMRLWSLEG--YKCVEEYSLP-NA-ASLVDFDFDESKIV-GLI----------GTRICIWRRNGLRS 184 (422)
Q Consensus 122 ~~-~l~s~~~-dg~v~iwd~~~--~~~~~~~~~~-~~-~~~~~~~~~~~~l~-~~~----------~~~i~~w~~~~~~~ 184 (422)
++ .++.|+. ...+.++|+.+ .+....-..+ .. ....+...++..++ |+. -..+.+||..+.+-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 55 4455543 45788899864 3333222222 11 12223333555555 443 14688999988763
Q ss_pred eeecC-C-CceeeeEEEeeeCCeEEEecCC---------------------------------------CeEEEEeCCCc
Q 014590 185 VFPSR-E-GTFMKGLCMRYFDPEAVVGCED---------------------------------------GTARVFDMYSR 223 (422)
Q Consensus 185 ~~~~~-~-~~~~~~~~~~~~~~~l~~~~~d---------------------------------------~~i~iwd~~~~ 223 (422)
..... . .......++...+..++.|+.+ ..+.+||+.+.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 32111 1 1111122233444446666654 57899999876
Q ss_pred ceee--eeecCCccEEEEEecCCCEEEEEcC------CCcEEEEeC--CCCccc---------cceEeEEEecCCCEEEE
Q 014590 224 KCSQ--IIRMHCAPVTSLSLSEDQLIISGSS------LGSIAISGL--SSDQRL---------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 224 ~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~------dg~i~iwd~--~~~~~~---------~~v~~~~~~~~~~~l~~ 284 (422)
+-.. .+......-.+++...+.+++.|+. ...+..||+ .+.+-. ....+.+...++..++.
T Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~ 258 (357)
T 2uvk_A 179 QWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFA 258 (357)
T ss_dssp EEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEE
T ss_pred cEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEE
Confidence 5322 2221111112344445667777764 345777876 333221 11122223346677777
Q ss_pred EeCC----------------------CeEEEEECCCC--eeeeeeccCCCceeeeeeEecCCCEEEEEecCC------eE
Q 014590 285 GTTA----------------------GYASCWDLRTM--KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDG------VL 334 (422)
Q Consensus 285 g~~d----------------------g~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg------~v 334 (422)
|+.+ ..+.+||+.+. +.+..+...... ..+ ...+++.++.|+.++ .|
T Consensus 259 GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~-~~~~~~i~v~GG~~~~~~~~~~v 335 (357)
T 2uvk_A 259 GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVS-LPWNNSLLIIGGETAGGKAVTDS 335 (357)
T ss_dssp CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEE-EEETTEEEEEEEECGGGCEEEEE
T ss_pred cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--cee-EEeCCEEEEEeeeCCCCCEeeeE
Confidence 7632 24778998754 333333222221 122 335778888888543 45
Q ss_pred EEEECCCCceEEEee
Q 014590 335 RVLDQNTGEVLSRCV 349 (422)
Q Consensus 335 ~vwd~~~~~~~~~~~ 349 (422)
.++++++++.+....
T Consensus 336 ~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 336 VLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEC-CCSCEEEC-
T ss_pred EEEEEcCcEeEeeec
Confidence 666888777665543
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.15 Score=47.57 Aligned_cols=227 Identities=9% Similarity=0.008 Sum_probs=126.8
Q ss_pred eeEEEec--C-CeEEEE-ecCCeEEEEEcCCCeEEEeeeCCC----ceeeEEE-------ecCCCeEE-EecCC------
Q 014590 115 VDQCRMK--R-GLILTG-VGDKVMRLWSLEGYKCVEEYSLPN----AASLVDF-------DFDESKIV-GLIGT------ 172 (422)
Q Consensus 115 v~~v~~~--~-~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~-~~~~~------ 172 (422)
...|+|. + +.|+.+ ...+.|++.|++++.......... ....++| ++++..|+ +...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 3467774 2 344444 434679999998877765554322 3566999 99999666 44433
Q ss_pred -eEEEEECCC-Cc-------eeeecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCC-------Ccce----------
Q 014590 173 -RICIWRRNG-LR-------SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMY-------SRKC---------- 225 (422)
Q Consensus 173 -~i~~w~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~-------~~~~---------- 225 (422)
.|.+++... +. ..+.. ......+++.+.+.. +++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 11 11111 111124455554444 5566677889999987 4543
Q ss_pred -eee-ee-cCCccEEEEEecCC-C-EEEEEcCCCcEEEEeC--CCCcc-----c-------------------cceE-eE
Q 014590 226 -SQI-IR-MHCAPVTSLSLSED-Q-LIISGSSLGSIAISGL--SSDQR-----L-------------------TGIK-TL 273 (422)
Q Consensus 226 -~~~-~~-~~~~~v~~l~~~~~-~-~l~s~~~dg~i~iwd~--~~~~~-----~-------------------~~v~-~~ 273 (422)
... +. +.......++++|+ + ++++-+....|+.++. ..+.. + .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 11 12234578999987 6 4555567778888654 32211 0 2234 44
Q ss_pred EEe-------cCCCEEEEEeCCCeEEEEECCCCeeeeeeccC------------------------CCceeeeeeEecC-
Q 014590 274 CYN-------PCSRLVFAGTTAGYASCWDLRTMKSLWETRIS------------------------PNVVYSLQHLQND- 321 (422)
Q Consensus 274 ~~~-------~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~v~~l~~~s~~- 321 (422)
+.. ++|.++++=..++.|+.++. ++. +.++.+. -.....|+ ++++
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~ 455 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVK 455 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCC
Confidence 554 45666666667888999984 453 3333221 01245676 7775
Q ss_pred CCEEEEEecCCeEEEEECCCCceEE
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLS 346 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~ 346 (422)
+.+.++=..+..|+.+++.......
T Consensus 456 g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp TEEEEEETTTTEEEEEEECCCC---
T ss_pred CEEEEEeCCCCEEEEEECCCCcccc
Confidence 6555555566777777776544433
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.19 E-value=0.1 Score=45.66 Aligned_cols=168 Identities=10% Similarity=0.028 Sum_probs=84.9
Q ss_pred CeEEEEECCCCceeeecCCCc-eeeeEEEe-eeCCeEEEecC-----------CCeEEEEeCCCcceee--eeecCCccE
Q 014590 172 TRICIWRRNGLRSVFPSREGT-FMKGLCMR-YFDPEAVVGCE-----------DGTARVFDMYSRKCSQ--IIRMHCAPV 236 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~--~~~~~~~~v 236 (422)
..+..||..+.+-........ .....+.. ..+..++.|+. ...+..||+.+++-.. .+......
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~- 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL- 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES-
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc-
Confidence 678889988877432222111 11122222 33444556653 1237788988765322 11111111
Q ss_pred EEEEecCCCEEEEEcCC--------CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC------CCeEEEEE
Q 014590 237 TSLSLSEDQLIISGSSL--------GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT------AGYASCWD 295 (422)
Q Consensus 237 ~~l~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~------dg~i~iwd 295 (422)
.+++...+.+++.|+.+ ..+.+||..+.+-. ......+...+++.++.|+. -..+.+||
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 171 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD 171 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEE
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEe
Confidence 12333355677777632 45888998776432 11111122236667777765 24588999
Q ss_pred CCCCee--eeeeccCCCceeeeeeEecCCCEEEEEecCC-----eEEEEECCCCc
Q 014590 296 LRTMKS--LWETRISPNVVYSLQHLQNDTSTLVVGGIDG-----VLRVLDQNTGE 343 (422)
Q Consensus 296 ~~~~~~--~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg-----~v~vwd~~~~~ 343 (422)
+.+.+- +..+...... .++ ...+++.++.|+.++ .+.+||..+.+
T Consensus 172 ~~~~~W~~~~~~p~~r~~-~~~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 172 PKKFEWKELAPMQTARSL-FGA--TVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTTTEEEECCCCSSCCBS-CEE--EEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCeEEECCCCCCchhc-eEE--EEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 886532 2222111111 112 223677777777654 47778877653
No 315
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.16 E-value=0.11 Score=45.73 Aligned_cols=218 Identities=13% Similarity=0.095 Sum_probs=110.8
Q ss_pred ccceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeC----CCceeeEEEecCCCeEEEecCCeEEEEECCCCc---e
Q 014590 112 SVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL----PNAASLVDFDFDESKIVGLIGTRICIWRRNGLR---S 184 (422)
Q Consensus 112 ~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~---~ 184 (422)
...+.++.+.++.++.++.++.|.. ..+.|+.-..... +.....+.+..++..++++.++.|.. ..+.++ .
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~ 156 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQA 156 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEE
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEE
Confidence 3467788886563333455665544 3333332222221 12234466666666666666665432 222232 1
Q ss_pred eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeC--CCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCC
Q 014590 185 VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM--YSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (422)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~--~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~ 262 (422)
+.....+ ....+.+.+.+..++.+...+..+-.|- .+-+.+. ......+..+.+.+++.++.++.+|.+.+.+..
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 157 LVQEAIG-VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPD 233 (327)
T ss_dssp EECSCCC-CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETT
T ss_pred eecCCCc-ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCC
Confidence 1111122 1222333333333555544433333442 1222221 234567888888877555566677877776321
Q ss_pred CCc-------c-c---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec---cCCCceeeeeeEecCCCEEEEE
Q 014590 263 SDQ-------R-L---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR---ISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 263 ~~~-------~-~---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
.++ . + ..+..+++.+++..++++. +|.| .+....++.-..+. .....++++. +.+++ .++.+
T Consensus 234 ~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~-~~~~~-~~~~~ 309 (327)
T 2xbg_A 234 NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKIL-FFSPD-QGFIL 309 (327)
T ss_dssp EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEE-EEETT-EEEEE
T ss_pred CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEE-EECCC-ceEEE
Confidence 111 1 1 3478889988887777665 6656 34444454333333 2235678888 66554 46666
Q ss_pred ecCCeEEEEE
Q 014590 329 GIDGVLRVLD 338 (422)
Q Consensus 329 ~~dg~v~vwd 338 (422)
+.+|.|.-++
T Consensus 310 G~~G~i~~~~ 319 (327)
T 2xbg_A 310 GQKGILLRYV 319 (327)
T ss_dssp CSTTEEEEEC
T ss_pred cCCceEEEEc
Confidence 7889877665
No 316
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.02 E-value=0.00034 Score=67.75 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=29.6
Q ss_pred ccccccCHHHHHHHHcCCC-hHhHHHHHhhchhHHHh
Q 014590 22 ATIESLNGDIICMIFSSLG-FFDLVRCSAVCKSWNAI 57 (422)
Q Consensus 22 ~~~~~Lp~e~~~~i~~~l~-~~~l~~~~~v~~~w~~~ 57 (422)
+.+..||+|++.+||+||+ .+++.++++|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 6788999999999999999 99999999999999998
No 317
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.91 E-value=0.1 Score=54.49 Aligned_cols=206 Identities=11% Similarity=0.094 Sum_probs=113.3
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEec
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGC 210 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (422)
..+|.|-|+.++..+.... -..-+.-++|..+.++--...++.++|+++...+-...-.. .++-|.+.++..+.--
T Consensus 47 ~~~vvIidl~~~~~~~rrp--i~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e--~VvfWkWis~~~l~lV 122 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP--ISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALV 122 (1630)
T ss_pred CceEEEEECCCCCCccccc--ccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCC--CceEEEecCCCeeEEE
Confidence 3478888988765542222 12233456777787875558999999998876542222222 2566676666622222
Q ss_pred CCCeEEEEeCCCc-ceeeeeecC----CccEEEEEecCC-CEEE------------------------------------
Q 014590 211 EDGTARVFDMYSR-KCSQIIRMH----CAPVTSLSLSED-QLII------------------------------------ 248 (422)
Q Consensus 211 ~d~~i~iwd~~~~-~~~~~~~~~----~~~v~~l~~~~~-~~l~------------------------------------ 248 (422)
.+..|.-|++... .+.+.+..| ...|..-..+++ ++++
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~ 202 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA 202 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhh
Confidence 3568999998532 333333322 122222222222 2222
Q ss_pred ---------------EEcC---CCcEEEEeCCCC---ccc----------------cceEeEEEecCCCEEEEEeCCCeE
Q 014590 249 ---------------SGSS---LGSIAISGLSSD---QRL----------------TGIKTLCYNPCSRLVFAGTTAGYA 291 (422)
Q Consensus 249 ---------------s~~~---dg~i~iwd~~~~---~~~----------------~~v~~~~~~~~~~~l~~g~~dg~i 291 (422)
.+.. .+.+++-++... ... .-..++..++....+..-+.-|.|
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 1111 134444444221 000 333455556666777888889999
Q ss_pred EEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC
Q 014590 292 SCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 292 ~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
.+||+.|+.++..-+.....|...+ ......=++.....|.|.--.+..
T Consensus 283 ~~~d~~t~~~i~~~ris~~~iF~~~-~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 283 HLYDLETGTCIYMNRISGETIFVTA-PHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EEEecccchhhhhccccCCceEEec-cCCCCCceEEEcCCceEEEEEEcc
Confidence 9999999998877666666666555 322222233334566665554443
No 318
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.009 Score=52.72 Aligned_cols=137 Identities=9% Similarity=-0.002 Sum_probs=86.0
Q ss_pred eEEEecCCCeEEEEeCCCcceeeeeecC-CccEEEEEec--C-CCEEEEE--cCCCcEEEEeCCCCccc------cce--
Q 014590 205 EAVVGCEDGTARVFDMYSRKCSQIIRMH-CAPVTSLSLS--E-DQLIISG--SSLGSIAISGLSSDQRL------TGI-- 270 (422)
Q Consensus 205 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~--~-~~~l~s~--~~dg~i~iwd~~~~~~~------~~v-- 270 (422)
.++.++.||.|.-.|..+|+....++.. ..++....-. + ++.++.+ +.||.+..+|..+|... ..+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 3889999999999999999999988754 1233222111 1 2344444 68999999999888554 101
Q ss_pred EeEEEe-----------cCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCC--ce---e--eeeeEe-----cCCCEEEE
Q 014590 271 KTLCYN-----------PCSRLVFAGTTAGYASCWDLRTMKSLWETRISPN--VV---Y--SLQHLQ-----NDTSTLVV 327 (422)
Q Consensus 271 ~~~~~~-----------~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~v---~--~l~~~s-----~~~~~l~s 327 (422)
.-+... ..+..+++|+.+|.+...|+++|+.++++..... .+ . |.. .. ..+..|+.
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~-~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSP-EEKIKLQECENMIVI 170 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC---------------------CCEEEE
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccc-ccccccccCCCeEEE
Confidence 001111 1456889999999999999999999998864321 00 0 111 00 12356777
Q ss_pred EecCCeEEEEECCCCc
Q 014590 328 GGIDGVLRVLDQNTGE 343 (422)
Q Consensus 328 ~~~dg~v~vwd~~~~~ 343 (422)
|..+..+.+.+ ++|+
T Consensus 171 g~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEEEECEECC-TTSC
T ss_pred ecceEEEEEEC-CCCC
Confidence 77777777766 4454
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.87 E-value=0.2 Score=43.63 Aligned_cols=166 Identities=11% Similarity=0.041 Sum_probs=83.4
Q ss_pred CeEEEEECCCCceee-ecCCCceeeeEEEeeeCCeEEEecC----C-----CeEEEEeCCCcceee--eeecCCccEEEE
Q 014590 172 TRICIWRRNGLRSVF-PSREGTFMKGLCMRYFDPEAVVGCE----D-----GTARVFDMYSRKCSQ--IIRMHCAPVTSL 239 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~----d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~l 239 (422)
..+.+||..+.+-.. ................+..++.|+. + ..+.+||+.+.+-.. .+....... ++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EE
Confidence 468888887766321 1111111111122223333555554 2 457889987765222 121111111 22
Q ss_pred EecCCCEEEEEcCC-----CcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCe
Q 014590 240 SLSEDQLIISGSSL-----GSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMK 300 (422)
Q Consensus 240 ~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~ 300 (422)
+...+.+++.|+.+ ..+.+||..+.+-. ..-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 23355677776643 36888998766533 11122222 66677777654 458899988653
Q ss_pred ee--eeeccCCCceeeeeeEecCCCEEEEEecC-----CeEEEEECCCCc
Q 014590 301 SL--WETRISPNVVYSLQHLQNDTSTLVVGGID-----GVLRVLDQNTGE 343 (422)
Q Consensus 301 ~~--~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 343 (422)
-. ..+......- ++. .-+++.++.|+.+ ..+.+||+.+.+
T Consensus 196 W~~~~~~p~~r~~~-~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 196 WRMITAMNTIRSGA-GVC--VLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EEECCCCSSCCBSC-EEE--EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EeeCCCCCCccccc-eEE--EECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 22 1121111111 222 2367777777764 457888877654
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.81 E-value=0.26 Score=43.96 Aligned_cols=25 Identities=20% Similarity=0.208 Sum_probs=15.0
Q ss_pred eeeEEEecCCCeEEEecCCeEEEEE
Q 014590 154 ASLVDFDFDESKIVGLIGTRICIWR 178 (422)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~i~~w~ 178 (422)
...++|.|+|+.+++..++.|.+++
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~ 57 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR 57 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE
Confidence 3446666666655555556666666
No 321
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.80 E-value=0.41 Score=46.29 Aligned_cols=109 Identities=11% Similarity=0.042 Sum_probs=59.9
Q ss_pred cceeEEEec--CC-eEEEEecCCeEEEEEcCCCeEEEee-eCCCceeeEEEecCCCeEE-Eec--CCeEEEEECCCCce-
Q 014590 113 VGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI--GTRICIWRRNGLRS- 184 (422)
Q Consensus 113 ~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--~~~i~~w~~~~~~~- 184 (422)
.....+++. ++ +.++-...+.|.+.+++.......+ ..-.....+++.|.+..|+ +.. .+.|...++++...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 456778884 45 5555566789999998754332222 2233456699999877666 443 46777777775432
Q ss_pred eeecCCCceeeeEEEeeeCCeEEEe-cCCCeEEEEeCC
Q 014590 185 VFPSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMY 221 (422)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~ 221 (422)
.+..........+++.+....|+.+ ...+.|...|+.
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 2222222223345555444443322 334455555553
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.78 E-value=0.24 Score=43.27 Aligned_cols=215 Identities=13% Similarity=0.065 Sum_probs=106.4
Q ss_pred eEEEEecCCeEEEEEcCCCeEEEe-eeCCCc-eeeEEEecCCCeEE-Eec----CC-------eEEEEECCCCceeee-c
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVEE-YSLPNA-ASLVDFDFDESKIV-GLI----GT-------RICIWRRNGLRSVFP-S 188 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~-~~~----~~-------~i~~w~~~~~~~~~~-~ 188 (422)
.++.|+. .+..||..+++.... ...+.. ........++..++ |+. ++ .+..||..+.+-... .
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 488999998876542 121111 22233445666655 552 11 277888887663211 1
Q ss_pred CCCceeeeEEEeeeCCeEEEecCC-------CeEEEEeCCCcceeee--eecCCccEEEEEecCCCEEEEEcC------C
Q 014590 189 REGTFMKGLCMRYFDPEAVVGCED-------GTARVFDMYSRKCSQI--IRMHCAPVTSLSLSEDQLIISGSS------L 253 (422)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~------d 253 (422)
.........+....+..++.|+.+ ..+.+||+.+.+-... +...... .+++...+.+++.|+. -
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEEETTEEEEECCEESSSCBC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEEECCEEEEEcCCCCCCCcc
Confidence 111111111222233345566543 3578889877653221 1111011 1222335566777764 2
Q ss_pred CcEEEEeCCCCccc---------cceEeEEEecCCCEEEEEeCC-----CeEEEEECCCCe--eeeeeccCCCceeeeee
Q 014590 254 GSIAISGLSSDQRL---------TGIKTLCYNPCSRLVFAGTTA-----GYASCWDLRTMK--SLWETRISPNVVYSLQH 317 (422)
Q Consensus 254 g~i~iwd~~~~~~~---------~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~--~~~~~~~~~~~v~~l~~ 317 (422)
..+.+||+.+.+-. ....++. -+++.++.|+.+ ..+.+||+.+.+ .+..+....... ++
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~-- 249 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SL-- 249 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EE--
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EE--
Confidence 45889998876533 1112222 266777777643 357789988653 222222111111 22
Q ss_pred EecCCCEEEEEecC--------------CeEEEEECCCCceEE
Q 014590 318 LQNDTSTLVVGGID--------------GVLRVLDQNTGEVLS 346 (422)
Q Consensus 318 ~s~~~~~l~s~~~d--------------g~v~vwd~~~~~~~~ 346 (422)
...+++.++.|+.+ ..+.+||+.+.+-..
T Consensus 250 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 250 VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 22467777777654 357788887665433
No 323
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.77 E-value=0.24 Score=43.19 Aligned_cols=185 Identities=11% Similarity=0.027 Sum_probs=108.5
Q ss_pred eeEEEecCCCeEE-Ee-cCCeEEEEECCCCceeeecCCC--------ceeeeEEE---eeeCCeEEEec-----------
Q 014590 155 SLVDFDFDESKIV-GL-IGTRICIWRRNGLRSVFPSREG--------TFMKGLCM---RYFDPEAVVGC----------- 210 (422)
Q Consensus 155 ~~~~~~~~~~~l~-~~-~~~~i~~w~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~l~~~~----------- 210 (422)
....|.+....+. ++ ..++|..|+..++........+ .....+.+ .+.+..+++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4578877666655 55 5899999998755322111111 11233444 23322233222
Q ss_pred --CCCeEEEEeCC---Ccceeeeee--c-----------CCccEEEEEecCC-CEEEEEcCC-CcEEEEeCCCCccc---
Q 014590 211 --EDGTARVFDMY---SRKCSQIIR--M-----------HCAPVTSLSLSED-QLIISGSSL-GSIAISGLSSDQRL--- 267 (422)
Q Consensus 211 --~d~~i~iwd~~---~~~~~~~~~--~-----------~~~~v~~l~~~~~-~~l~s~~~d-g~i~iwd~~~~~~~--- 267 (422)
.+..|..+|+. +++.+.... . -......++..++ +..++++.. +.|...+.......
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 25779999998 787765543 1 1124788999875 777777776 66666554322111
Q ss_pred ---------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee--eeeec--cCC---Cceee-eeeEecCCCE-EEEEe
Q 014590 268 ---------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS--LWETR--ISP---NVVYS-LQHLQNDTST-LVVGG 329 (422)
Q Consensus 268 ---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~--~~~---~~v~~-l~~~s~~~~~-l~s~~ 329 (422)
...+.++++|+|+.|++....|.+..+|+.+... + ... +.. ..... +. ...+|+. |++.+
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v-~~~~~G~~~~~~~~dgilp-~~~~G~vllV~~~ 253 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPE-PVKINGDFGTLSGTEKIVT-VPVGNESVLVGAR 253 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCE-ECEESSCCCCCTTEEEEEE-EEETTEEEEEEEE
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceee-cccccCCcccccCcccccc-cccCCEEEEEEcC
Confidence 3466899999999999887799999999884322 1 111 211 11223 33 3357776 55555
Q ss_pred cCCeEEEEECCC
Q 014590 330 IDGVLRVLDQNT 341 (422)
Q Consensus 330 ~dg~v~vwd~~~ 341 (422)
..+.+.+.+...
T Consensus 254 ~~~~~~l~S~Dg 265 (334)
T 2p9w_A 254 APYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEECSST
T ss_pred CCCEEEEECCCC
Confidence 566666665543
No 324
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.35 Score=45.01 Aligned_cols=244 Identities=11% Similarity=0.082 Sum_probs=132.6
Q ss_pred eeEEEec-CCCeEE-Eec-CCeEEEEECCCCceeeecCCC--c--eeeeEEE-------eeeCCeEEEecCCC-------
Q 014590 155 SLVDFDF-DESKIV-GLI-GTRICIWRRNGLRSVFPSREG--T--FMKGLCM-------RYFDPEAVVGCEDG------- 213 (422)
Q Consensus 155 ~~~~~~~-~~~~l~-~~~-~~~i~~w~~~~~~~~~~~~~~--~--~~~~~~~-------~~~~~~l~~~~~d~------- 213 (422)
..++|+| ++..|+ +.. .+.|++.|++++........+ . ....+++ ...+..|+++...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 4588998 355554 433 367888998887643211111 1 2345666 66677565555443
Q ss_pred eEEEEeCCC-ccee-----eeeecCCccEEEEEecC-C-CEEEEEcCCCcEEEEeCC-------CCcc------------
Q 014590 214 TARVFDMYS-RKCS-----QIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLS-------SDQR------------ 266 (422)
Q Consensus 214 ~i~iwd~~~-~~~~-----~~~~~~~~~v~~l~~~~-~-~~l~s~~~dg~i~iwd~~-------~~~~------------ 266 (422)
.|.+.+... ++.. ..+.... ....++++| + .++++-..++.|..+|+. ++..
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred eEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 366665433 2221 1222111 234678888 3 556666788889999987 4443
Q ss_pred --c------cceEeEEEecCCCEEEEE-eCCCeEEEEECC--CCeee--eeeccC---C------------Ccee-eeee
Q 014590 267 --L------TGIKTLCYNPCSRLVFAG-TTAGYASCWDLR--TMKSL--WETRIS---P------------NVVY-SLQH 317 (422)
Q Consensus 267 --~------~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~--~~~~~--~~~~~~---~------------~~v~-~l~~ 317 (422)
+ .....++|+|+|++|+.+ +..+.|+.++.. ++... ..+.+. . .... .+.
T Consensus 301 ~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~- 379 (496)
T 3kya_A 301 KQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF- 379 (496)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE-
T ss_pred ceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE-
Confidence 1 345789999999965555 466788886543 33221 122111 1 1123 233
Q ss_pred Ee-------cCCCEEEEEecCCeEEEEECCCCceEEEeeecCCccc----ccCCCCCCeEEeeeccccCCCcccccCCCC
Q 014590 318 LQ-------NDTSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSAS----SSSNKVSGVIERNEGRRLSAGCCIDRIPKT 386 (422)
Q Consensus 318 ~s-------~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~----~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~ 386 (422)
.. +++.+.++-..+..|+.++ .+| .+.++.+...... ...|..||.. .. ..
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~--------~~--------~a 441 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDL--------RE--------VA 441 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEET--------TT--------TC
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCc--------hh--------hh
Confidence 44 4455666666677888887 445 3455544321000 0001112210 00 11
Q ss_pred CCCCeEEEEec---CEEEEEEeCCCeEEEEEccCC
Q 014590 387 IRPPITCLAVG---MKKVVTTHNSKYIRLWKFNYS 418 (422)
Q Consensus 387 h~~~v~~i~~~---~~~l~s~s~Dg~i~iW~~~~~ 418 (422)
.-.....|+++ +.++++=....+|+.++++..
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 11345778883 567777777889999988754
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.74 E-value=0.7 Score=48.17 Aligned_cols=166 Identities=13% Similarity=0.123 Sum_probs=100.5
Q ss_pred CeEEEEeCCCcceeeeeecC-CccEEEEE---ecC--CCEEEEEc----------CCCcEEEEeCCCCccc--------c
Q 014590 213 GTARVFDMYSRKCSQIIRMH-CAPVTSLS---LSE--DQLIISGS----------SLGSIAISGLSSDQRL--------T 268 (422)
Q Consensus 213 ~~i~iwd~~~~~~~~~~~~~-~~~v~~l~---~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~--------~ 268 (422)
..|++.|..+.+.+..+.-. ...+.+++ |.. ..++++|+ ..|.|.+|++..++.. +
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 45788888877776665422 23444544 332 26888876 3478999998754333 7
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeee-eeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC-CceEE
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLW-ETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-GEVLS 346 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~ 346 (422)
.+++++-- +| +|++|- ..+|++|++...+.+. ....+. .|..+. ....+++++.|..-..|.+...+. ...+.
T Consensus 887 ~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~-l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~ 961 (1158)
T 3ei3_A 887 AVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYN-NIMALY-LKTKGDFILVGDLMRSVLLLAYKPMEGNFE 961 (1158)
T ss_dssp CEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECC-CSCEEE-EEEETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred cCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccc-cEEEEE-EeccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence 78887743 45 455544 4679999998654433 111121 233222 334567888887766666654321 22233
Q ss_pred EeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEe-cCEEEEEEeCCCeEEEEEccC
Q 014590 347 RCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAV-GMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 347 ~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
.+..+. +...++++.+ +...++.+..+|.|.+.+.+.
T Consensus 962 ~~a~D~----------------------------------~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 962 EIARDF----------------------------------NPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEECC----------------------------------SCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred EEEeec----------------------------------ccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 332222 2347888888 666788899999999988765
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.59 E-value=0.36 Score=42.88 Aligned_cols=127 Identities=10% Similarity=0.084 Sum_probs=73.8
Q ss_pred CCeEEEEeCCCcc----eeeeeecC-CccEEEEEecCCC-EEEEEc-----------------CCCcEEEEeCCCCccc-
Q 014590 212 DGTARVFDMYSRK----CSQIIRMH-CAPVTSLSLSEDQ-LIISGS-----------------SLGSIAISGLSSDQRL- 267 (422)
Q Consensus 212 d~~i~iwd~~~~~----~~~~~~~~-~~~v~~l~~~~~~-~l~s~~-----------------~dg~i~iwd~~~~~~~- 267 (422)
+.+|.+|++..+. .+..+.+. -...+.+++.++. +.++.. ..|.+..+|...-+.+
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~ 217 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA 217 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEee
Confidence 4577777664431 22333322 2356888888764 444432 1245666665322222
Q ss_pred ---cceEeEEEecCCCEEEEEe-CCCeEEEEECCC-Cee--eeeeccCCCceeeeeeEec-CCCEEEEEecC-CeEEEEE
Q 014590 268 ---TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRT-MKS--LWETRISPNVVYSLQHLQN-DTSTLVVGGID-GVLRVLD 338 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~l~~~s~-~~~~l~s~~~d-g~v~vwd 338 (422)
...+.++|+||++.++++. ..+.|..|++.. ++. ...+ ...+..-.++ +++ +|++.+++..+ +.|..|+
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~-vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNIS-VDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEE-ECTTTCCEEEEEESCHHHHHSCC
T ss_pred cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEE-EeCCCCcEEEEecCCceEEEEEC
Confidence 6788999999998887765 568899999863 322 1223 2235566777 888 58877766544 3444444
Q ss_pred CC
Q 014590 339 QN 340 (422)
Q Consensus 339 ~~ 340 (422)
..
T Consensus 296 P~ 297 (355)
T 3sre_A 296 AE 297 (355)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.54 E-value=0.39 Score=42.68 Aligned_cols=92 Identities=7% Similarity=-0.043 Sum_probs=42.1
Q ss_pred CCCeEE-E-ecCCeEEEEECCC--Cce-eeecCC-CceeeeEEEeeeCCeEEEecC-C---------CeEEEEeCCCcce
Q 014590 162 DESKIV-G-LIGTRICIWRRNG--LRS-VFPSRE-GTFMKGLCMRYFDPEAVVGCE-D---------GTARVFDMYSRKC 225 (422)
Q Consensus 162 ~~~~l~-~-~~~~~i~~w~~~~--~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~-d---------~~i~iwd~~~~~~ 225 (422)
++..++ + .....+.++|..+ ..- ...... .......+....+..++.|+. + ..+.+||+.+.+-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 454444 3 3346788888874 221 111111 111111222223334555654 2 4688999887652
Q ss_pred ee--eeecCCccEEEEEecCCCEEEEEcCC
Q 014590 226 SQ--IIRMHCAPVTSLSLSEDQLIISGSSL 253 (422)
Q Consensus 226 ~~--~~~~~~~~v~~l~~~~~~~l~s~~~d 253 (422)
.. .+......-.+++...+.+++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 22 12101111122233456777888754
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.48 E-value=0.31 Score=44.00 Aligned_cols=139 Identities=9% Similarity=-0.048 Sum_probs=91.4
Q ss_pred eeEEEecCCCeEEEecCCeEEEEECCCCc--eeeecC---CCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcc-----
Q 014590 155 SLVDFDFDESKIVGLIGTRICIWRRNGLR--SVFPSR---EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK----- 224 (422)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~i~~w~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----- 224 (422)
.....+.+|..++...++.|+.-++.... ..+... ....+..+.+++.+..||..+ +..|.|-.+..+.
T Consensus 24 R~~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 24 RYIFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred cEEEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcc
Confidence 33455667777777777888888776322 223222 121233466777777766664 4578888876321
Q ss_pred -------eeeeeec------CCccEEEEEecC----CCEEEEEcCCCcEEEEeCCCCccc-----------------cce
Q 014590 225 -------CSQIIRM------HCAPVTSLSLSE----DQLIISGSSLGSIAISGLSSDQRL-----------------TGI 270 (422)
Q Consensus 225 -------~~~~~~~------~~~~v~~l~~~~----~~~l~s~~~dg~i~iwd~~~~~~~-----------------~~v 270 (422)
..+.+.- ...+|..+.|+| +..+++-..|++|++||+...... ..|
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 1112221 246799999998 368999999999999999862211 568
Q ss_pred EeEEEecCCCEEEEEe--CCCeEEEE
Q 014590 271 KTLCYNPCSRLVFAGT--TAGYASCW 294 (422)
Q Consensus 271 ~~~~~~~~~~~l~~g~--~dg~i~iw 294 (422)
.+++|.+++-.|.+.+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999999887777755 78888654
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.33 E-value=0.59 Score=42.37 Aligned_cols=230 Identities=8% Similarity=0.061 Sum_probs=138.3
Q ss_pred CCeEEEEe---cCCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEEEecCCeEEEEECCCCceeeecCCCceeeeEE
Q 014590 122 RGLILTGV---GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLC 198 (422)
Q Consensus 122 ~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 198 (422)
|.|+..-- .+..|.|-|+.++..+..... ...+.-++|..+.++--...++.++|+++...+-...-.. .++-
T Consensus 35 DkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi--~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e--~Vvf 110 (494)
T 1bpo_A 35 DKFICIREKVGEQAQVVIIDMNDPSNPIRRPI--SADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD--DVTF 110 (494)
T ss_dssp TTEEEEEECCTTCCEEEEEETTSTTSCEEEEC--CCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSS--CCCE
T ss_pred CceEEEEecCCCCCeEEEEECCCCCcceeccc--ccceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCC--CceE
Confidence 44554432 334788889887654433222 2334567888888885558999999999987653222222 2455
Q ss_pred EeeeCCeEEEecCCCeEEEEeCCC-cceeeeeecCC----ccEEEEEecCC-CEEEEEc-------CCCcEEEEeCCCCc
Q 014590 199 MRYFDPEAVVGCEDGTARVFDMYS-RKCSQIIRMHC----APVTSLSLSED-QLIISGS-------SLGSIAISGLSSDQ 265 (422)
Q Consensus 199 ~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~----~~v~~l~~~~~-~~l~s~~-------~dg~i~iwd~~~~~ 265 (422)
|.+.++..+.--.+..|+-|++.. ..+.+.+..|. ..|..-..+++ ++++..+ -.|.+.+|..+.+.
T Consensus 111 WkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~ 190 (494)
T 1bpo_A 111 WKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (494)
T ss_dssp EEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC
T ss_pred EEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc
Confidence 666555522223356899999964 35677776553 35666666666 5544332 24678899987766
Q ss_pred cc---cceEeE-EEecCC-----CEEEEEeC---CCeEEEEECCCC---eee-----eeec----cCCCceeeeeeEecC
Q 014590 266 RL---TGIKTL-CYNPCS-----RLVFAGTT---AGYASCWDLRTM---KSL-----WETR----ISPNVVYSLQHLQND 321 (422)
Q Consensus 266 ~~---~~v~~~-~~~~~~-----~~l~~g~~---dg~i~iwd~~~~---~~~-----~~~~----~~~~~v~~l~~~s~~ 321 (422)
.. +..-+. .+-.+| ..+..+.. .++++|.++... .+. ..+. ...+-.-++. .++.
T Consensus 191 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamq-vs~k 269 (494)
T 1bpo_A 191 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ-ISEK 269 (494)
T ss_dssp EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEE-EETT
T ss_pred cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEE-eccc
Confidence 54 222111 122222 23333333 378999988532 111 1111 1123344666 7777
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEeeecCCccc
Q 014590 322 TSTLVVGGIDGVLRVLDQNTGEVLSRCVMDIGSAS 356 (422)
Q Consensus 322 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 356 (422)
-..+..-+.-|.+++||+.++.++..-+...+.+.
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 78888899999999999999999988776666443
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.32 E-value=0.38 Score=43.45 Aligned_cols=133 Identities=13% Similarity=0.094 Sum_probs=84.8
Q ss_pred eCCeEEEecCCCeEEEEeCCCcceeeeeecC----CccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----------
Q 014590 202 FDPEAVVGCEDGTARVFDMYSRKCSQIIRMH----CAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL---------- 267 (422)
Q Consensus 202 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------- 267 (422)
.+..++.+- ++.||.-++..+...+.+... -..|..+..+|++.+++-..+..|.+-.+..+...
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 333444443 478888887644444444432 22577899998744444445668888887633211
Q ss_pred ---------------cceEeEEEecCC---CEEEEEeCCCeEEEEECCCC--eeeeeec---------cCCCceeeeeeE
Q 014590 268 ---------------TGIKTLCYNPCS---RLVFAGTTAGYASCWDLRTM--KSLWETR---------ISPNVVYSLQHL 318 (422)
Q Consensus 268 ---------------~~v~~~~~~~~~---~~l~~g~~dg~i~iwd~~~~--~~~~~~~---------~~~~~v~~l~~~ 318 (422)
.+|..+.|+|-+ ..|++-..|+.|++||+... ++. .+. .....|.+++ |
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~-F 187 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE-F 187 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE-E
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE-E
Confidence 458999999954 68999999999999999852 222 222 1224577887 8
Q ss_pred ecCCCEEEEEe--cCCeEEEE
Q 014590 319 QNDTSTLVVGG--IDGVLRVL 337 (422)
Q Consensus 319 s~~~~~l~s~~--~dg~v~vw 337 (422)
..++-.|...+ ..|.|+-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 88776565544 77777654
No 331
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=96.27 E-value=0.0036 Score=43.05 Aligned_cols=65 Identities=11% Similarity=-0.049 Sum_probs=39.4
Q ss_pred cCHHHHHHHHcCCChHhHHHHHhhchhHHHhccCChhHHHHHHhhcCCCCC-CCCChHHHHHHHHHhh
Q 014590 27 LNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNT-SGSSMRLHLEELAMKH 93 (422)
Q Consensus 27 Lp~e~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 93 (422)
.|.+++.-|+..++|..|.++-.-|... +-.++.+|+.+|.+.++...+ ...+|+..+..+...+
T Consensus 13 ~Py~lL~PVLek~tp~QL~~IE~~nP~L--~~dTdeLWk~~c~rdF~~~~p~e~esWRelY~rl~~er 78 (97)
T 4hfx_A 13 VPYSVLEPVLERCTPDQLYRIEEYNHVL--IEETDQLWKVHCHRDFKEERPEEYESWREMYLRLQDAR 78 (97)
T ss_dssp -------CCGGGCCHHHHHHHHTC--------CCHHHHHHHC----CCSCCCSSSCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHccCCHHHHHHHHHhCccc--chhhHHHHHHHHHhHCcccCCCCCCCHHHHHHHHHHHH
Confidence 6999999999999999999999988733 456789999999999976655 7788887766554443
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.11 E-value=0.62 Score=40.58 Aligned_cols=168 Identities=9% Similarity=0.045 Sum_probs=81.0
Q ss_pred CeEEEEECCCCceeeecCC--CceeeeEEEeeeCCeEEEecC----CC-------eEEEEeCCCcceeee--eecCCccE
Q 014590 172 TRICIWRRNGLRSVFPSRE--GTFMKGLCMRYFDPEAVVGCE----DG-------TARVFDMYSRKCSQI--IRMHCAPV 236 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~~--~~~~~~~v 236 (422)
..+..||..+.+-...... ............+..++.|+. ++ .+..||..+++-... +......
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~- 102 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL- 102 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-
T ss_pred cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-
Confidence 3478888887763321111 111112222333444666662 11 277888877653221 2111111
Q ss_pred EEEEecCCCEEEEEcCC-------CcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeC------CCeEEEEEC
Q 014590 237 TSLSLSEDQLIISGSSL-------GSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTT------AGYASCWDL 296 (422)
Q Consensus 237 ~~l~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~ 296 (422)
.+++...+.+++.|+.+ ..+.+||..+.+-. ......+...++..++.|+. -..+.+||+
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 22333355677777654 24788888765533 11111112246667777763 235889998
Q ss_pred CCCee--eeeeccCCCceeeeeeEecCCCEEEEEecC-----CeEEEEECCCCc
Q 014590 297 RTMKS--LWETRISPNVVYSLQHLQNDTSTLVVGGID-----GVLRVLDQNTGE 343 (422)
Q Consensus 297 ~~~~~--~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 343 (422)
.+.+- +..+...... .+++ ..+++.++.|+.+ ..+.+||+.+.+
T Consensus 183 ~~~~W~~~~~~p~~r~~-~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSM-FGVA--IHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTTEEEEECCCSSCCBS-CEEE--EETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCEEEECCCCCCCccc-ceEE--EECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 87542 2212111111 1222 2366777777643 346677776554
No 333
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.10 E-value=0.0023 Score=61.94 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=32.0
Q ss_pred ccccCHHHHHHHHcCC-ChHhHHHHHhhchhHHHh
Q 014590 24 IESLNGDIICMIFSSL-GFFDLVRCSAVCKSWNAI 57 (422)
Q Consensus 24 ~~~Lp~e~~~~i~~~l-~~~~l~~~~~v~~~w~~~ 57 (422)
...||+|++.+||+|| +++++.++++|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999998
No 334
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.88 E-value=1.4 Score=42.67 Aligned_cols=148 Identities=12% Similarity=0.022 Sum_probs=76.3
Q ss_pred cceeEEEec--CC-eEEEEecCCeEEEEEcCCCeEEEee-eCCCceeeEEEecCCCeEE-Eec--CCeEEEEECCCCcee
Q 014590 113 VGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI--GTRICIWRRNGLRSV 185 (422)
Q Consensus 113 ~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--~~~i~~w~~~~~~~~ 185 (422)
.....+++. ++ +.++-...+.|.+.+++.......+ ..-.....+++.|....|. +.. .+.|...++++....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 346677773 45 4555556788999998754322222 2234556799999766666 442 567888888765432
Q ss_pred eecCCCceeeeEEEeeeCCeEEE-ecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeC
Q 014590 186 FPSREGTFMKGLCMRYFDPEAVV-GCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGL 261 (422)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~ 261 (422)
...........+++...+..|+. -...+.|...|+..... ..+.........+++..+..+++-...+.|...|.
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence 11112222335555555555433 34456677777643322 22222222233444444333333333444444443
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.69 E-value=1.9 Score=42.81 Aligned_cols=219 Identities=15% Similarity=0.133 Sum_probs=121.1
Q ss_pred ceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeee----C--CCceeeEEEecCCCeEEEecCCeEEEEECCCCcee-e
Q 014590 114 GVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYS----L--PNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-F 186 (422)
Q Consensus 114 ~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----~--~~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~-~ 186 (422)
.|.++...+|.|..|+.+ -+..+|..+++.. .+. . ...+..+....++...+++. +.+..++..+.... +
T Consensus 104 ~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~ 180 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFEGI 180 (758)
T ss_dssp CEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTTEEEEE
T ss_pred eEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCceEEe
Confidence 466665566766666655 6788898776543 231 1 12233455556677666765 46778887766532 1
Q ss_pred ecCCC---ceeeeEEEeee--CCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeC
Q 014590 187 PSREG---TFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGL 261 (422)
Q Consensus 187 ~~~~~---~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~ 261 (422)
..... ....+.++..+ +..|..|+. +-+..+|..+++...........|.++...+++.+..|+. +-+.+++.
T Consensus 181 ~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~ 258 (758)
T 3ott_A 181 PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHN 258 (758)
T ss_dssp CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECC
T ss_pred cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEec
Confidence 11111 01123444444 344666664 4688889877654322111234578888776666666765 45778887
Q ss_pred CCCccc--------------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec-----cCCCceeeeeeEecCC
Q 014590 262 SSDQRL--------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR-----ISPNVVYSLQHLQNDT 322 (422)
Q Consensus 262 ~~~~~~--------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~l~~~s~~~ 322 (422)
.++... ..|.++....+|. |..|+..| +.++.....-...... .....|.++. ...+|
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~-~D~~g 335 (758)
T 3ott_A 259 DTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLF-RDSKG 335 (758)
T ss_dssp TTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEE-ECTTC
T ss_pred CCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEE-EcCCC
Confidence 654321 4588888877776 55566667 5554332111111110 1234688886 66777
Q ss_pred CEEEEEecCCeEEEEECCCC
Q 014590 323 STLVVGGIDGVLRVLDQNTG 342 (422)
Q Consensus 323 ~~l~s~~~dg~v~vwd~~~~ 342 (422)
.+.+ |+.+| +..++..++
T Consensus 336 ~lWi-Gt~~G-l~~~~~~~~ 353 (758)
T 3ott_A 336 FYWF-GGANG-LIRFTDPAG 353 (758)
T ss_dssp CEEE-EETTE-EEEESCTTS
T ss_pred CEEE-eeCCc-ceeeccccc
Confidence 6444 45555 667766543
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.56 E-value=1.2 Score=39.58 Aligned_cols=218 Identities=12% Similarity=-0.006 Sum_probs=114.0
Q ss_pred eeEEeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCeE--EEeee----CCCceeeEEEecC---CCeEE-Eec-C
Q 014590 104 DIDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKC--VEEYS----LPNAASLVDFDFD---ESKIV-GLI-G 171 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~----~~~~~~~~~~~~~---~~~l~-~~~-~ 171 (422)
.+..+...-.....++| ++|.++.+..+|.|++++ +++. +..+. ......-++++|+ +..|. +.. .
T Consensus 22 ~~~~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 44444444556678998 677666667789999998 4442 22221 1233455999998 55554 332 1
Q ss_pred -----CeEEEEECCCC-----ceeeec-----CCCceeeeEEEeeeCCeEEEecC-------------CCeEEEEeCCCc
Q 014590 172 -----TRICIWRRNGL-----RSVFPS-----REGTFMKGLCMRYFDPEAVVGCE-------------DGTARVFDMYSR 223 (422)
Q Consensus 172 -----~~i~~w~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~ 223 (422)
+.|..++.... +.++.. ...|....+.+.+++...++.+. .|.|.-++....
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 67888887643 122221 12233445666666644333221 255666665420
Q ss_pred ------------ceeeee-ecCCccEEEEEecC-CCEEEEEc-CCCc--------EEEEeCCCCcc--------------
Q 014590 224 ------------KCSQII-RMHCAPVTSLSLSE-DQLIISGS-SLGS--------IAISGLSSDQR-------------- 266 (422)
Q Consensus 224 ------------~~~~~~-~~~~~~v~~l~~~~-~~~l~s~~-~dg~--------i~iwd~~~~~~-------------- 266 (422)
.....+ .++. ....++|+| +..|.++. .... |.+. ..+..
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~ 256 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPR 256 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTT
T ss_pred CCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCC
Confidence 011111 1222 246788888 44344432 2222 3332 22220
Q ss_pred ----c------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee------eeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 267 ----L------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS------LWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 267 ----~------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
. .....++| .+|.++++....+.|...++..... ...+-.....+..++ +.|||.+.++.
T Consensus 257 ~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~-~~pdG~lyv~~ 332 (352)
T 2ism_A 257 YRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQ-VGPDGALYVTT 332 (352)
T ss_dssp SCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEE-ECTTSCEEEEE
T ss_pred CcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEE-ECCCCcEEEEE
Confidence 0 23556777 4666666666677787777653321 122212235678888 88888765554
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.38 E-value=1.2 Score=38.65 Aligned_cols=122 Identities=8% Similarity=0.021 Sum_probs=74.8
Q ss_pred CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEc
Q 014590 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGS 251 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~ 251 (422)
.+|.+.|+..+..+.+..-... ..-+++..+.++.-. ..++.++|+++.+.++.+.-. ..|.-=.|-.++.++-.+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~Ad--sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT 124 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISAD--SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT 124 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCS--EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE
T ss_pred CEEEEEECCCCCCccccccccc--eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc
Confidence 4678888887664432222111 233445555454444 679999999999998888754 466666676555554443
Q ss_pred CCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEeC-------CCeEEEEECCC
Q 014590 252 SLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGTT-------AGYASCWDLRT 298 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~~-------dg~i~iwd~~~ 298 (422)
+..|+.|++...... ..|..-..+++.++++..+- .|.+.+|..+.
T Consensus 125 -~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 125 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp -SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred -CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 457899988643221 56666666777777665431 35566776653
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.30 E-value=4.7 Score=42.58 Aligned_cols=121 Identities=8% Similarity=0.022 Sum_probs=72.8
Q ss_pred CeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEc
Q 014590 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGS 251 (422)
Q Consensus 172 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~ 251 (422)
.+|.+.|+..+..+....-+.. ..-+++..+.++.- ...++.|+|+++.+.++.+.-. .+|.-=.|-..+.++-.+
T Consensus 48 ~~vvIidl~~~~~~~rrpi~Ad--sAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT 123 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPISAD--SAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT 123 (1630)
T ss_pred ceEEEEECCCCCCcccccccch--hhccCCCcceEEEe-cCCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc
Confidence 4677888877664422211111 22334444444443 3789999999998888877643 345555666554444443
Q ss_pred CCCcEEEEeCCCCccc------------cceEeEEEecCCCEEEEEe-------CCCeEEEEECC
Q 014590 252 SLGSIAISGLSSDQRL------------TGIKTLCYNPCSRLVFAGT-------TAGYASCWDLR 297 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~------------~~v~~~~~~~~~~~l~~g~-------~dg~i~iwd~~ 297 (422)
+..|..|++...... ..|..-..+++.++++..+ -.|.+.+|...
T Consensus 124 -~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e 187 (1630)
T 1xi4_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (1630)
T ss_pred -CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc
Confidence 457999999643222 5666667777888776543 24667777665
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.14 E-value=4.4 Score=39.71 Aligned_cols=184 Identities=12% Similarity=0.099 Sum_probs=95.2
Q ss_pred cCCCeEE-Eec----CCeEEEEECCCCcee-ee-c------CCCceeeeEEEee-eCCeEEEecCC------CeEEEEeC
Q 014590 161 FDESKIV-GLI----GTRICIWRRNGLRSV-FP-S------REGTFMKGLCMRY-FDPEAVVGCED------GTARVFDM 220 (422)
Q Consensus 161 ~~~~~l~-~~~----~~~i~~w~~~~~~~~-~~-~------~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~iwd~ 220 (422)
.++..++ |+. -..+.+||..+..-. .. . .........+... .+..++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 5555555 443 256888998877633 22 1 1111111222221 34446666543 35788998
Q ss_pred CCccee--eeeecCCccEEEEEecCCCEEEEEcCCC--cEEEEeCCCCccc------------cceEeEEEecC-CCEEE
Q 014590 221 YSRKCS--QIIRMHCAPVTSLSLSEDQLIISGSSLG--SIAISGLSSDQRL------------TGIKTLCYNPC-SRLVF 283 (422)
Q Consensus 221 ~~~~~~--~~~~~~~~~v~~l~~~~~~~l~s~~~dg--~i~iwd~~~~~~~------------~~v~~~~~~~~-~~~l~ 283 (422)
.+.+-. ..+......-..+.+..+.+++.|+.++ .+.+||..+..-. ....++.+..+ +..++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 775422 2222111122233333567888887654 6899998775432 22233555554 66777
Q ss_pred EEeC--C-----CeEEEEECCCCee-----eeeecc---CCCceeeeeeEecCCCEEEEEecC--------CeEEEEECC
Q 014590 284 AGTT--A-----GYASCWDLRTMKS-----LWETRI---SPNVVYSLQHLQNDTSTLVVGGID--------GVLRVLDQN 340 (422)
Q Consensus 284 ~g~~--d-----g~i~iwd~~~~~~-----~~~~~~---~~~~v~~l~~~s~~~~~l~s~~~d--------g~v~vwd~~ 340 (422)
.|+. + +.+.+||+.+.+- -..+.. ....-.++. ...+++.++.|+.+ ..+.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 4588999887651 111111 111111222 22337777777743 458888887
Q ss_pred CCceE
Q 014590 341 TGEVL 345 (422)
Q Consensus 341 ~~~~~ 345 (422)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 66543
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.76 E-value=2.3 Score=34.65 Aligned_cols=93 Identities=10% Similarity=-0.094 Sum_probs=56.0
Q ss_pred eEEEeeeCCeEEEecCCCeEEEEeCCCccee------eeee--cCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc
Q 014590 196 GLCMRYFDPEAVVGCEDGTARVFDMYSRKCS------QIIR--MHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL 267 (422)
Q Consensus 196 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~------~~~~--~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 267 (422)
.+++.+++. |.+. .+|.+.-.+..+.+.. ..+- +-.. ..++.|.|+..|..+ .||.|.-++-.+....
T Consensus 45 ~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 45 FLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTD 120 (236)
T ss_dssp EEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCCCSTTC
T ss_pred eEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCC
Confidence 455555333 4444 6777766666542211 1110 1111 367888888655555 6699988886442221
Q ss_pred --------------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 268 --------------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 268 --------------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
..+..|.+.|+|.+.++. |+.++-.
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred ceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 578999999999887777 7775443
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.63 E-value=2.5 Score=34.51 Aligned_cols=134 Identities=6% Similarity=-0.111 Sum_probs=73.0
Q ss_pred ceeeEEEecCCCeEEEecCCeEEEEECCCCc-eeeecCCCce-------eeeEEEeeeCCeEEEecCCCeEEEEeCCCcc
Q 014590 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLR-SVFPSREGTF-------MKGLCMRYFDPEAVVGCEDGTARVFDMYSRK 224 (422)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 224 (422)
....++|+|+|...+. .+|.+.-.+..+.. ..+......+ -..+.+.+++. |..+ .||.|.-++..+..
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav-~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV-SKDKLYKASPPQSD 118 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE-ETTEEEEESCCCST
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe-CCCEEEEeCCCcCC
Confidence 4557999998886667 88887777764422 1111111110 01222222222 4444 67999888764322
Q ss_pred e-------eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc--------------cceEeEEEecCCCEEE
Q 014590 225 C-------SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL--------------TGIKTLCYNPCSRLVF 283 (422)
Q Consensus 225 ~-------~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------------~~v~~~~~~~~~~~l~ 283 (422)
. ...-..--..+..|.+.|+..|.... |+.++-....++... .....+.|.+++.+.+
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 1 11111112467889999986666666 888655444332211 3445566888877666
Q ss_pred EEeCCCeEE
Q 014590 284 AGTTAGYAS 292 (422)
Q Consensus 284 ~g~~dg~i~ 292 (422)
+. +|.++
T Consensus 198 v~--~g~~Y 204 (236)
T 1tl2_A 198 VQ--GGKFY 204 (236)
T ss_dssp EE--TTEEE
T ss_pred Ee--CCeEE
Confidence 65 66443
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.09 E-value=5.9 Score=37.26 Aligned_cols=97 Identities=7% Similarity=-0.002 Sum_probs=64.9
Q ss_pred cEEEEeCCC----Cccc-------cceEeEEEecCCCEEEEEe-CCCeEEEEECCCC------ee-------eeeeccCC
Q 014590 255 SIAISGLSS----DQRL-------TGIKTLCYNPCSRLVFAGT-TAGYASCWDLRTM------KS-------LWETRISP 309 (422)
Q Consensus 255 ~i~iwd~~~----~~~~-------~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~------~~-------~~~~~~~~ 309 (422)
.+.+.|.+. +..+ .....+..+|||+++++++ .+.++.++|++.. +. ..+....
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G- 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG- 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-
Confidence 466777765 3222 5667788999999998877 4788999998842 11 2222222
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCC----------ceEEEeeecCC
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTG----------EVLSRCVMDIG 353 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~----------~~~~~~~~~~~ 353 (422)
-.....+ |+++|....|---|..|.-|++... ..+..+..|.+
T Consensus 378 lGPlHt~-Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq 430 (638)
T 3sbq_A 378 LGPLHTT-FDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ 430 (638)
T ss_dssp SCEEEEE-ECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC
T ss_pred CcccEEE-ECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccC
Confidence 2345666 9899965566668999999998753 45566655444
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.96 E-value=3.9 Score=34.87 Aligned_cols=189 Identities=12% Similarity=0.092 Sum_probs=98.2
Q ss_pred CCeEEEEeCCCcceeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEE
Q 014590 212 DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFA 284 (422)
Q Consensus 212 d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~ 284 (422)
||.|..|-....-.+..-......|..++......++. . ||.+..|-....-.+ ..|..++...+ ..++
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~a 116 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYA 116 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEE
Confidence 89999997543221111111233577777755544554 4 899999976543222 56777776544 3344
Q ss_pred EeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECCC-Cc---------eEEEeeecCCc
Q 014590 285 GTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNT-GE---------VLSRCVMDIGS 354 (422)
Q Consensus 285 g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~-~~---------~~~~~~~~~~~ 354 (422)
-. +|.|+.|-....-.+.........|..++ . ...+.+.-. ||.|+.|-... ++ .+..+.....
T Consensus 117 l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~-~--G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~- 190 (282)
T 3qhy_B 117 LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALD-G--GVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF- 190 (282)
T ss_dssp EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEE-E--CSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-
T ss_pred Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEE-c--ccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-
Confidence 45 89999997654222211111224466665 3 233333334 79999996542 11 1222222211
Q ss_pred ccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEccC
Q 014590 355 ASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFNY 417 (422)
Q Consensus 355 ~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~~ 417 (422)
..++- .||.++.|=....-+ +. .+..-...|..|+....+.+.-. ||.|..|-...
T Consensus 191 -hs~al-~~G~v~~wG~n~~gq---lg-~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 191 -HSLAL-KDGKVIAWGDNRYKQ---TT-VPTEALSGVSAIASGEWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp -EEEEE-ETTEEEEEECCTTST---TC-CCGGGGSSCCEEEECSSCEEEEE-TTEEEEESTTC
T ss_pred -EEEEE-ECCeEEEEECCCCCC---CC-CCcccCCCceEEEcCCCEEEEEE-CCEEEEecCCC
Confidence 11222 477776553222111 00 00111246888888544444444 99999997543
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.33 E-value=5.6 Score=35.18 Aligned_cols=222 Identities=10% Similarity=-0.032 Sum_probs=119.4
Q ss_pred ceeeEEeeccccceeEEEe-cCCeEEEEecCCeEEEEEcCCCe-EEEeee----CCCceeeEEEecC---CCeEE-Eec-
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYK-CVEEYS----LPNAASLVDFDFD---ESKIV-GLI- 170 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~----~~~~~~~~~~~~~---~~~l~-~~~- 170 (422)
+..+..+...-.....++| ++|.|+.+..+|.|++++. +++ .+..+. ......-++++|+ +..|. +..
T Consensus 18 ~~~~~~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 18 KFKISEVASDLEVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp CEEEEEEECSCSCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CeEEEEEeCCCCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 3455555555566788888 6786777777899999974 455 222221 1233455899997 55554 433
Q ss_pred ---C----CeEEEEECCCC------c-eeee---cCCCceeeeEEEeeeCCeEEEecC-------------CCeEEEEeC
Q 014590 171 ---G----TRICIWRRNGL------R-SVFP---SREGTFMKGLCMRYFDPEAVVGCE-------------DGTARVFDM 220 (422)
Q Consensus 171 ---~----~~i~~w~~~~~------~-~~~~---~~~~~~~~~~~~~~~~~~l~~~~~-------------d~~i~iwd~ 220 (422)
+ +.|..++.... . .++. ....|....+.+.+++...++.+. .|.|.-++.
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~ 176 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDE 176 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECT
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcC
Confidence 2 56777877654 1 1221 112233345666666654443221 245555555
Q ss_pred CCcce--------eee-eecCCccEEEEEecC-CCEEEEEcCCC----cEEEEeCCCCc------------------cc-
Q 014590 221 YSRKC--------SQI-IRMHCAPVTSLSLSE-DQLIISGSSLG----SIAISGLSSDQ------------------RL- 267 (422)
Q Consensus 221 ~~~~~--------~~~-~~~~~~~v~~l~~~~-~~~l~s~~~dg----~i~iwd~~~~~------------------~~- 267 (422)
. ++. ... ..++.. ...++|+| +..|.++.... .|.+.. .+. .+
T Consensus 177 d-G~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 177 E-GRPPADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp T-SCCCTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred C-CCCCCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEe
Confidence 3 220 011 123322 35788988 44444443221 233322 111 00
Q ss_pred ------cceEeEEEe-------cCCCEEEEEeCCCeEEEEECCCC-eee--eee-ccCCCceeeeeeEecCCCEEEEEe
Q 014590 268 ------TGIKTLCYN-------PCSRLVFAGTTAGYASCWDLRTM-KSL--WET-RISPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 268 ------~~v~~~~~~-------~~~~~l~~g~~dg~i~iwd~~~~-~~~--~~~-~~~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
..+..++|. .+|.++++....+.|...++... +.. ..+ .+....+..++ +.|||.+.++..
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~-~~pDG~lyv~~~ 330 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVV-IDDDGGILISTS 330 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEE-ECTTSCEEEEEC
T ss_pred ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEE-ECCCCcEEEEEe
Confidence 246677773 56777777667778888888743 221 222 22235678888 889887655543
No 345
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=91.89 E-value=6.8 Score=35.16 Aligned_cols=232 Identities=11% Similarity=0.065 Sum_probs=116.1
Q ss_pred EEEecCCCeE-EEecCCeEEEEECCCCce-------------eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC
Q 014590 157 VDFDFDESKI-VGLIGTRICIWRRNGLRS-------------VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS 222 (422)
Q Consensus 157 ~~~~~~~~~l-~~~~~~~i~~w~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 222 (422)
+.++--..+. +...+|.|..|-....-. ............+.+..-....+.-..||.|..|-...
T Consensus 56 ~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~ 135 (389)
T 3kci_A 56 VQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 135 (389)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCG
T ss_pred EEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCC
Confidence 3444434443 477889999986432110 01111222223344444444455667799999996432
Q ss_pred -cc----------eeeeeec-CCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------------------cceE
Q 014590 223 -RK----------CSQIIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------------------TGIK 271 (422)
Q Consensus 223 -~~----------~~~~~~~-~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~ 271 (422)
++ ....+.. ....|..++... ...+.-..||.|..|-....-.+ ..|.
T Consensus 136 ~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 136 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG-AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS-SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCcCCCCCCccCcCCeEecccCCCeEEEEEeCc-CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 11 0111111 122566666533 44555567999999975432111 3455
Q ss_pred eEEEecCCCEEEEEeCCCeEEEEECCCC-e----------eeeeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEEC
Q 014590 272 TLCYNPCSRLVFAGTTAGYASCWDLRTM-K----------SLWETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 272 ~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~----------~~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~ 339 (422)
.++........++-..||.|+.|-.... + ....+.. ....|..++ . ...+.+.-..||.|+.|-.
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~-~--G~~hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE-C--GSQFSVALTKSGAVYTWGK 291 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE-E--ETTEEEEEETTSCEEEEEC
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe-C--CCCEEEEEeCCCeEEEEeC
Confidence 5555433356666778999999965421 1 1111111 112355555 2 3345555568899999965
Q ss_pred CCCceEEEeeecCCcccccCCCCCCeEEeeeccccCCCcccccCCCCCCCCeEEEEecCEEEEEEeCCCeEEEEEcc
Q 014590 340 NTGEVLSRCVMDIGSASSSSNKVSGVIERNEGRRLSAGCCIDRIPKTIRPPITCLAVGMKKVVTTHNSKYIRLWKFN 416 (422)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~s~d~~i~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~l~s~s~Dg~i~iW~~~ 416 (422)
...-.+. .+..+..... ..+..+ ....|..|+....+.+....||.|..|-..
T Consensus 292 n~~GqLG------------~g~~~~~~~P---------~~v~~l---~~~~v~~ia~G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 292 GDYHRLG------------HGSDDHVRRP---------RQVQGL---QGKKVIAIATGSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp CGGGTTC------------SSSCCCEEEE---------EECGGG---TTCCEEEEEECSSEEEEEETTCCEEEEECC
T ss_pred CCCCCCC------------CCCCccccCC---------eEeccC---CCCCEEEEEeccCeEEEECCCCCEEEeeCC
Confidence 3211000 0000000000 000001 123577788755555556889999999754
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.45 E-value=11 Score=36.82 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=74.3
Q ss_pred CCeEEEecCC----CeEEEEeCCCcceeeee--------ecCCccEEEEEec-CCCEEEEEcCC------CcEEEEeCCC
Q 014590 203 DPEAVVGCED----GTARVFDMYSRKCSQII--------RMHCAPVTSLSLS-EDQLIISGSSL------GSIAISGLSS 263 (422)
Q Consensus 203 ~~~l~~~~~d----~~i~iwd~~~~~~~~~~--------~~~~~~v~~l~~~-~~~~l~s~~~d------g~i~iwd~~~ 263 (422)
+..++.|+.+ ..+.+||+.+++-...- ......-..+.+. .+.+++.|+.+ ..+.+||..+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 3335555542 46888898776533221 1111112233332 45677777643 3578888877
Q ss_pred Cccc-------cce-EeEEEecCCCEEEEEeCCC--eEEEEECCCCeee--ee---eccCCCceeeeeeEecC-CCEEEE
Q 014590 264 DQRL-------TGI-KTLCYNPCSRLVFAGTTAG--YASCWDLRTMKSL--WE---TRISPNVVYSLQHLQND-TSTLVV 327 (422)
Q Consensus 264 ~~~~-------~~v-~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~--~~---~~~~~~~v~~l~~~s~~-~~~l~s 327 (422)
.+-. ... .+++.-.++..++.|+.++ .+.+||..+.+-. .. .......-.++. +..+ ++.++.
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v-~~~~~~~iyv~ 556 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE-FDPVSKQGIIL 556 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEE-EETTTTEEEEE
T ss_pred CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEE-EeCCCCEEEEE
Confidence 5433 111 1222224788888887654 6899999875422 11 111111122233 4444 666777
Q ss_pred Eec--C-----CeEEEEECCCCc
Q 014590 328 GGI--D-----GVLRVLDQNTGE 343 (422)
Q Consensus 328 ~~~--d-----g~v~vwd~~~~~ 343 (422)
|+. + ..+.+||+.+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCcCCCCCeeeCcEEEEEccCCc
Confidence 765 2 458888887765
No 347
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.19 E-value=7.6 Score=34.34 Aligned_cols=133 Identities=11% Similarity=-0.011 Sum_probs=71.5
Q ss_pred CceeeEEEecCCCeEEEecCCeEEEEECCCCceeeec-----CCCceeeeEEEeee---CCeEEEecC----C----CeE
Q 014590 152 NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS-----REGTFMKGLCMRYF---DPEAVVGCE----D----GTA 215 (422)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~i~~w~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~l~~~~~----d----~~i 215 (422)
.....+++.|+|+.+++..++.|.+++.... ..+.. ........+++.++ +..|+++.. + +.|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3456689999999778888899999974433 22211 11112234555544 345554433 2 567
Q ss_pred EEEeCCCc--c-----ee-eeeec-CCccEEEEEecCC-CEEEEEcC-------------CCcEEEEeCCCC--------
Q 014590 216 RVFDMYSR--K-----CS-QIIRM-HCAPVTSLSLSED-QLIISGSS-------------LGSIAISGLSSD-------- 264 (422)
Q Consensus 216 ~iwd~~~~--~-----~~-~~~~~-~~~~v~~l~~~~~-~~l~s~~~-------------dg~i~iwd~~~~-------- 264 (422)
..++...+ . .+ ..+.. .......++|.|+ .++++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776543 1 11 11221 1112357889987 44444322 245666665421
Q ss_pred -ccc-----cceEeEEEec-CCCEEEEE
Q 014590 265 -QRL-----TGIKTLCYNP-CSRLVFAG 285 (422)
Q Consensus 265 -~~~-----~~v~~~~~~~-~~~~l~~g 285 (422)
..+ .....++|+| +|+++++-
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEE
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEe
Confidence 011 4467899999 56655443
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.73 E-value=8.7 Score=32.67 Aligned_cols=159 Identities=13% Similarity=0.028 Sum_probs=83.5
Q ss_pred EecCCeEEEEECCCCcee-eecCCCceeeeEEEeeeCCe-EEEecCCCeEEEEeCCCcceeeeeecCCccEEEEEecCCC
Q 014590 168 GLIGTRICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQ 245 (422)
Q Consensus 168 ~~~~~~i~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~ 245 (422)
.. +|.+..|-....-.+ ..... ...+..+..-... ++. . ||.|..|-....-.+..-..-...|..++.....
T Consensus 39 l~-~G~v~~wG~n~~Gqlg~p~~~--~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h 113 (282)
T 3qhy_B 39 LK-GGKVLGWGANLNGQLTMPAAT--QSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA 113 (282)
T ss_dssp EE-TTEEEEEECCSSSTTSCCGGG--GSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE
T ss_pred EE-CCEEEEEeCCCCCCCCCCccC--CCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE
Confidence 44 899999976543221 11111 1123334433333 333 4 8999999754321111111113467777775554
Q ss_pred EEEEEcCCCcEEEEeCCCCccc-------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeeccCCCceeeeeeE
Q 014590 246 LIISGSSLGSIAISGLSSDQRL-------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETRISPNVVYSLQHL 318 (422)
Q Consensus 246 ~l~s~~~dg~i~iwd~~~~~~~-------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 318 (422)
.++. . ||.|..|-....-.+ ..|..++...+ ..++-. ||.|+.|-....-.+..-..-...|..++ .
T Consensus 114 s~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~-~ 187 (282)
T 3qhy_B 114 SYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVA-G 187 (282)
T ss_dssp EEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEE-E
T ss_pred EEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEE-e
Confidence 4444 4 999999976543222 56777766433 233333 79999997654222211111124566666 3
Q ss_pred ecCCCEEEEEecCCeEEEEECC
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
...+.+.- .||.|+.|-..
T Consensus 188 --G~~hs~al-~~G~v~~wG~n 206 (282)
T 3qhy_B 188 --GIFHSLAL-KDGKVIAWGDN 206 (282)
T ss_dssp --CSSEEEEE-ETTEEEEEECC
T ss_pred --cCCEEEEE-ECCeEEEEECC
Confidence 23333333 69999999654
No 349
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.99 E-value=16 Score=33.55 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=14.5
Q ss_pred cceEeEEEecCCCEEEEEe
Q 014590 268 TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~ 286 (422)
.....|+|.|||.+.++.+
T Consensus 144 H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 144 HQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCEEEEEECTTSCEEEEEC
T ss_pred CCCCeEeECCCCeEEEEEC
Confidence 4467899999998777654
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.44 E-value=14 Score=37.68 Aligned_cols=39 Identities=10% Similarity=0.029 Sum_probs=33.8
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 567778888889999999999999999999999887643
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.43 E-value=20 Score=32.00 Aligned_cols=125 Identities=6% Similarity=0.017 Sum_probs=76.5
Q ss_pred eEEEEeCCCc--ceeeeeecC------CccEEEEEec---C-----CCEEEEE-cCCCcEEEEeCCCCccc---------
Q 014590 214 TARVFDMYSR--KCSQIIRMH------CAPVTSLSLS---E-----DQLIISG-SSLGSIAISGLSSDQRL--------- 267 (422)
Q Consensus 214 ~i~iwd~~~~--~~~~~~~~~------~~~v~~l~~~---~-----~~~l~s~-~~dg~i~iwd~~~~~~~--------- 267 (422)
.|.+||+.++ +.++.+.-. ...+..+.+. | +.++..+ +..+.|.++|+.+++.-
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778888888 877776432 3457777776 2 2333333 45678999999876543
Q ss_pred ----------------cceEeEEEecC----CCEEEEEeCCCeEEEEECCC-----C---eeeeeeccCCC---ceeeee
Q 014590 268 ----------------TGIKTLCYNPC----SRLVFAGTTAGYASCWDLRT-----M---KSLWETRISPN---VVYSLQ 316 (422)
Q Consensus 268 ----------------~~v~~~~~~~~----~~~l~~g~~dg~i~iwd~~~-----~---~~~~~~~~~~~---~v~~l~ 316 (422)
..+..++++|+ ++.|.-....+ -++|.+.+ . ..+..+ +..+ .-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 47888899987 67777666554 23343321 1 111111 2222 222344
Q ss_pred eEe-cCCCEEEEEecCCeEEEEECCC
Q 014590 317 HLQ-NDTSTLVVGGIDGVLRVLDQNT 341 (422)
Q Consensus 317 ~~s-~~~~~l~s~~~dg~v~vwd~~~ 341 (422)
++ .+|..+++--....|..|+..+
T Consensus 282 -~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 -YDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred -EeCCCCeEEEEeccCCeEEEEeCCC
Confidence 54 5677777777888999999874
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.38 E-value=20 Score=36.54 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=33.5
Q ss_pred CceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 310 NVVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 310 ~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
..+.+++ ..++..++++-+.|+++|+|++.+++++.+...
T Consensus 236 ~~~~~~~-~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 236 NTIISMI-FLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TCEEEEE-EETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEe-ecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 3566666 677888999999999999999999999887643
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.60 E-value=54 Score=34.21 Aligned_cols=38 Identities=11% Similarity=0.025 Sum_probs=31.5
Q ss_pred ceEeEEEecCCCEEEEEeCCCeEEEEECCCCeeeeeec
Q 014590 269 GIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSLWETR 306 (422)
Q Consensus 269 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 306 (422)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556666788999999999999999999999887643
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.34 E-value=4.5 Score=37.99 Aligned_cols=104 Identities=12% Similarity=0.046 Sum_probs=68.0
Q ss_pred EEEEEecCC-CE-EEEEcCCCcEEEEeCCCCc------cc-------------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 236 VTSLSLSED-QL-IISGSSLGSIAISGLSSDQ------RL-------------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 236 v~~l~~~~~-~~-l~s~~~dg~i~iwd~~~~~------~~-------------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
...+.++|+ .+ +++|-.+.++.++|++... .+ ......+|.++|+...+-.-|..|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 356778887 44 5555678899999987421 10 677889999999666666689999999
Q ss_pred ECCCC----------eeeeeeccCCCceeeee-----eEecCCCEEEEEec---CCe----------EEEEECC
Q 014590 295 DLRTM----------KSLWETRISPNVVYSLQ-----HLQNDTSTLVVGGI---DGV----------LRVLDQN 340 (422)
Q Consensus 295 d~~~~----------~~~~~~~~~~~~v~~l~-----~~s~~~~~l~s~~~---dg~----------v~vwd~~ 340 (422)
++... ..+.++..|-.+ -.+. --.++|++|++... |.. -.+.|+.
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs 477 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS 477 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS
T ss_pred eccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecC
Confidence 98742 334445444321 1111 13578999998763 443 3677775
No 355
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=80.39 E-value=30 Score=30.41 Aligned_cols=222 Identities=9% Similarity=-0.068 Sum_probs=114.9
Q ss_pred eeeEEeeccccceeEEEe-cCCeEEEEec-CCeEEEEEcCCCeEE--Eeee-----CCCceeeEEEecC---CCeEE-E-
Q 014590 103 IDIDQWKAHSVGVDQCRM-KRGLILTGVG-DKVMRLWSLEGYKCV--EEYS-----LPNAASLVDFDFD---ESKIV-G- 168 (422)
Q Consensus 103 ~~~~~l~~H~~~v~~v~~-~~~~l~s~~~-dg~v~iwd~~~~~~~--~~~~-----~~~~~~~~~~~~~---~~~l~-~- 168 (422)
..+..+...-...+.++| ++|.++.+.. .|.|++++..+++.. ..+. ......-++++|+ +..|. .
T Consensus 22 ~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 22 KVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred ceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 345566666677889999 6775555555 899999987665542 2221 1223345899985 44444 3
Q ss_pred --ecCCeEEEEECCCC----------ceeeec---CCCceeeeEEEeeeCCeEEEec-------------CCCeEEEEeC
Q 014590 169 --LIGTRICIWRRNGL----------RSVFPS---REGTFMKGLCMRYFDPEAVVGC-------------EDGTARVFDM 220 (422)
Q Consensus 169 --~~~~~i~~w~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-------------~d~~i~iwd~ 220 (422)
..++.|.-|..... +.++.. ...|....+.+.+++...++.+ ..|.|.-.+.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 23456666665541 122221 2234444566666665444432 1244444454
Q ss_pred CCcce--------eeee-ecCCccEEEEEecCCCEEEEEc--CCCcEEEEeCCCCccc----------------------
Q 014590 221 YSRKC--------SQII-RMHCAPVTSLSLSEDQLIISGS--SLGSIAISGLSSDQRL---------------------- 267 (422)
Q Consensus 221 ~~~~~--------~~~~-~~~~~~v~~l~~~~~~~l~s~~--~dg~i~iwd~~~~~~~---------------------- 267 (422)
. ++. ...+ .+|.. ...++|+|+..|.++- .|+.=.+--+..+...
T Consensus 182 d-G~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 182 D-GEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp T-SSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred C-CCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 3 220 0111 23433 3578888764444442 2222222222222221
Q ss_pred ---cceEeEEEecCCCEEEEEeCCCeEEEEECCCCeee----eeeccCCCceeeeeeEecCCCEEEEE
Q 014590 268 ---TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKSL----WETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 ---~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~----~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
.....++|. +|..+......+.|....+.....+ .-+.+..+.+..|+ ..|||.++++.
T Consensus 260 ~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~-~~pDG~lyv~t 325 (347)
T 3das_A 260 TDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVA-PAGGDKLWLVT 325 (347)
T ss_dssp TTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEE-EEETTEEEEEE
T ss_pred CCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEE-ECCCCcEEEEE
Confidence 134566665 4555665556666766666544321 22333346788888 88888755543
No 356
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=80.14 E-value=30 Score=30.35 Aligned_cols=228 Identities=11% Similarity=0.015 Sum_probs=119.7
Q ss_pred eeEEeeccccceeEEEe-cCCe-EEEEecCCeEEEEEcCCCeEEEeee--------CCCceeeEEEecC---CCeEE-Ee
Q 014590 104 DIDQWKAHSVGVDQCRM-KRGL-ILTGVGDKVMRLWSLEGYKCVEEYS--------LPNAASLVDFDFD---ESKIV-GL 169 (422)
Q Consensus 104 ~~~~l~~H~~~v~~v~~-~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~l~-~~ 169 (422)
.+..+...-.....|+| ++|. |+.+...|.|++++.. ++....+. ......-++++|+ +..|. +.
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 34444444456688888 6775 8888889999999854 43321111 1123345899996 55544 32
Q ss_pred c--------CCeEEEEECCCC-------ceeeecC-----CCceeeeEEEeeeCCeEEEecC-------------CCeEE
Q 014590 170 I--------GTRICIWRRNGL-------RSVFPSR-----EGTFMKGLCMRYFDPEAVVGCE-------------DGTAR 216 (422)
Q Consensus 170 ~--------~~~i~~w~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~-------------d~~i~ 216 (422)
. ...|..++.... +.++... ..|....+.+.+++...++.+. .|.|.
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ 167 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLV 167 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEE
Confidence 2 235666666432 1122221 2233445677766644333222 24666
Q ss_pred EEeCCCcc------------eeeee-ecCCccEEEEEecC-CCEEEEEcCCC--cEEEEeCCCCcc--------------
Q 014590 217 VFDMYSRK------------CSQII-RMHCAPVTSLSLSE-DQLIISGSSLG--SIAISGLSSDQR-------------- 266 (422)
Q Consensus 217 iwd~~~~~------------~~~~~-~~~~~~v~~l~~~~-~~~l~s~~~dg--~i~iwd~~~~~~-------------- 266 (422)
-++....- ....+ .++ .....++|+| +..|.++.... .=.+.-+..+..
T Consensus 168 ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~ 246 (353)
T 2g8s_A 168 RLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSG 246 (353)
T ss_dssp EEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTS
T ss_pred EECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCC
Confidence 66764220 11111 233 2357899998 55555543321 111211111110
Q ss_pred --------------c---------cceEeEEEec-------CCCEEEEEeCCCeEEEEECCCCeeeee--e-ccCCCcee
Q 014590 267 --------------L---------TGIKTLCYNP-------CSRLVFAGTTAGYASCWDLRTMKSLWE--T-RISPNVVY 313 (422)
Q Consensus 267 --------------~---------~~v~~~~~~~-------~~~~l~~g~~dg~i~iwd~~~~~~~~~--~-~~~~~~v~ 313 (422)
. ..+..++|.. +|.++++....+.|...++..++.... + ......+.
T Consensus 247 ~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~ 326 (353)
T 2g8s_A 247 FKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIR 326 (353)
T ss_dssp SCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEE
T ss_pred CccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCcee
Confidence 0 2456677753 466777766778888888776543322 1 12234688
Q ss_pred eeeeEecCCCEEEEEe-cCCeE
Q 014590 314 SLQHLQNDTSTLVVGG-IDGVL 334 (422)
Q Consensus 314 ~l~~~s~~~~~l~s~~-~dg~v 334 (422)
.++ +.|||.+.++.. .+|.|
T Consensus 327 ~v~-~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 327 DVR-TGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp EEE-ECTTSCEEEEECSTTEEE
T ss_pred EEE-ECCCCcEEEEEeCCCCEE
Confidence 888 889998655432 34443
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.66 E-value=3.3 Score=40.22 Aligned_cols=38 Identities=8% Similarity=0.358 Sum_probs=33.1
Q ss_pred cceeEEEecCCeEEEEecCCeEEEEEcCCCeEEEeeeC
Q 014590 113 VGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL 150 (422)
Q Consensus 113 ~~v~~v~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 150 (422)
..|.++.+++.++++-+.|+++|+||+.+++++.+...
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 46777777777999999999999999999999988766
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=74.53 E-value=40 Score=28.83 Aligned_cols=197 Identities=9% Similarity=0.022 Sum_probs=105.3
Q ss_pred CCeEEEEEcCCCeEEEeeeCCCceeeEEEecCCCeEE-Eec--------------CCeEEEEECCCCcee-eecCCCcee
Q 014590 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI--------------GTRICIWRRNGLRSV-FPSREGTFM 194 (422)
Q Consensus 131 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~--------------~~~i~~w~~~~~~~~-~~~~~~~~~ 194 (422)
++.+...+.+... ...+.. ..+.-+++++..|. +.. ...|+..++++.... +....
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~---~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---- 107 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSN---DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---- 107 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEE---EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----
T ss_pred CceEEEEcCCCCC-CEEccC---CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----
Confidence 4556555654332 222221 12345688999988 433 246777788776533 22221
Q ss_pred eeEEEeeeCCeEEEec----CCCeEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE-EEcCCCcEEEEeCCCCccc-
Q 014590 195 KGLCMRYFDPEAVVGC----EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSLGSIAISGLSSDQRL- 267 (422)
Q Consensus 195 ~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~-s~~~dg~i~iwd~~~~~~~- 267 (422)
...+...++.|+-.. .+..|...++.. .....+..+.. ..++++ +.|+ +.....+|..-++..+...
T Consensus 108 -~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 108 -CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp -EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred -ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 225566777766544 345666667753 33334433322 234443 4444 4334678888887665432
Q ss_pred --cceEeEEEecCCCEEEEEeCC--CeEEEEECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEe--cCCeEEEEECCC
Q 014590 268 --TGIKTLCYNPCSRLVFAGTTA--GYASCWDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGG--IDGVLRVLDQNT 341 (422)
Q Consensus 268 --~~v~~~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~--~dg~v~vwd~~~ 341 (422)
.......+.|++.+|+-...+ ..|..-++.... ...+.. ..+. +++|++++|+-++ ..+.|..-++.
T Consensus 182 l~~~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~~---~~~~~g~~Iy~~~~~~~~~i~~~~~D- 254 (302)
T 3s25_A 182 FYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANIE---HYNVYGSLIFYQRGGDNPALCVVKND- 254 (302)
T ss_dssp EECSCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCEE---EEEEETTEEEEEECSSSCEEEEEETT-
T ss_pred EeCCCccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCcc---eEEECCCEEEEEECCCCcEEEEEECC-
Confidence 111223466889888876543 367777776443 333332 2232 3778888887653 23556666665
Q ss_pred CceEEEe
Q 014590 342 GEVLSRC 348 (422)
Q Consensus 342 ~~~~~~~ 348 (422)
|...+.+
T Consensus 255 G~~r~~l 261 (302)
T 3s25_A 255 GTGFKEL 261 (302)
T ss_dssp SCCCEEE
T ss_pred CCccEEe
Confidence 4333343
No 359
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=74.38 E-value=45 Score=29.28 Aligned_cols=96 Identities=10% Similarity=0.085 Sum_probs=56.6
Q ss_pred CccEEEEEecCC-CEEEEEcCCCcEEEEeCCCCccc-------------cceEeEEEecC---CCEEEEE---eCCCeEE
Q 014590 233 CAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRL-------------TGIKTLCYNPC---SRLVFAG---TTAGYAS 292 (422)
Q Consensus 233 ~~~v~~l~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~---~~~l~~g---~~dg~i~ 292 (422)
-...+.++|.|+ .++++--..|.|++++..++... .....|+++|+ ...|++. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345678999988 55444444899999986554421 55788999995 3444443 2345666
Q ss_pred EEECCCC----------eeee-eecc-CCCceeeeeeEecCCCEEEEEe
Q 014590 293 CWDLRTM----------KSLW-ETRI-SPNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 293 iwd~~~~----------~~~~-~~~~-~~~~v~~l~~~s~~~~~l~s~~ 329 (422)
-|....+ +.+. .+.. ....-..|. |.|||.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~-fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIA-FGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEE-ECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCcccc-CCCCCCEEEEEC
Confidence 6665431 1111 1211 112235687 999998766644
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.61 E-value=42 Score=28.68 Aligned_cols=167 Identities=9% Similarity=0.032 Sum_probs=85.5
Q ss_pred ecCCCeEE-Ee--cCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeEEEecC--------------CCeEEEEeCCC
Q 014590 160 DFDESKIV-GL--IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE--------------DGTARVFDMYS 222 (422)
Q Consensus 160 ~~~~~~l~-~~--~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------d~~i~iwd~~~ 222 (422)
++++..+. .. .++.|...+.+......-.. + .+..+...+..|+-... ...|+..++..
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-~---~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-D---TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-E---EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccC-C---ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 44566655 22 24556666655443211111 1 12344555666444432 34678888876
Q ss_pred cceeeeeecCCccEEEEEecCCCEEEEEc----CCCcEEEEeCCCCccc----cceEeEEEecCCCEEEEEeC-CCeEEE
Q 014590 223 RKCSQIIRMHCAPVTSLSLSEDQLIISGS----SLGSIAISGLSSDQRL----TGIKTLCYNPCSRLVFAGTT-AGYASC 293 (422)
Q Consensus 223 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~----~dg~i~iwd~~~~~~~----~~v~~~~~~~~~~~l~~g~~-dg~i~i 293 (422)
++... +. ......++. .++.++-.. ....|...++...... ..+ .+++|+++.|+-.+. ...|..
T Consensus 98 ~~~~~-l~--~~~~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~ 171 (302)
T 3s25_A 98 HGSTV-LD--PDPCIYASL-IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYR 171 (302)
T ss_dssp CCCEE-EE--CSCEEEEEE-ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECTTTCCEEE
T ss_pred CcceE-ee--cCCccEEEE-eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEE
Confidence 65333 22 122223333 235555443 3445666666533222 323 456788888886664 567888
Q ss_pred EECCCCeeeeeeccCCCceeeeeeEecCCCEEEEEecC--CeEEEEECCC
Q 014590 294 WDLRTMKSLWETRISPNVVYSLQHLQNDTSTLVVGGID--GVLRVLDQNT 341 (422)
Q Consensus 294 wd~~~~~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~d--g~v~vwd~~~ 341 (422)
.++..+.....+. +... .. +.|++++|+-...+ ..|..-++..
T Consensus 172 ~~l~g~~~~~l~~---~~~~-~~-~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 172 YDTASQSEALFYD---CNCY-KP-VVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EETTTTEEEEEEC---SCEE-EE-EEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EECCCCCEEEEeC---CCcc-ce-eeecCCEEEEEEcCCCcEEEEEECCC
Confidence 8887655433232 2222 33 55888887765543 3565556653
No 361
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=73.14 E-value=48 Score=29.05 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=23.7
Q ss_pred ceeeEEEecCCC-eEEEecCCeEEEEECCC
Q 014590 153 AASLVDFDFDES-KIVGLIGTRICIWRRNG 181 (422)
Q Consensus 153 ~~~~~~~~~~~~-~l~~~~~~~i~~w~~~~ 181 (422)
....++|.|+|+ .+++...|.|++++.++
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g 48 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK 48 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC
Confidence 456799999999 77788889999998654
No 362
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=72.44 E-value=46 Score=28.56 Aligned_cols=173 Identities=11% Similarity=0.076 Sum_probs=92.0
Q ss_pred eEEEEecCCeEEEEEcCCCeEEE---------eeeCCCceeeEE-EecCCCeEEEecCCeEEEEECC---C------Cce
Q 014590 124 LILTGVGDKVMRLWSLEGYKCVE---------EYSLPNAASLVD-FDFDESKIVGLIGTRICIWRRN---G------LRS 184 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~w~~~---~------~~~ 184 (422)
++++.+.+|.|+--.+.+.+... .+..++....+. .+.....++.+..|.+.-+... . +..
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~ 84 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRP 84 (307)
T ss_dssp EEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeE
Confidence 67888899999877765432211 122222222322 3333444448888887666542 1 111
Q ss_pred ---eeecCCCc-eeeeEEEee--eCCeEEEecCCCeEEEEeCCC-------cceeeeeecCCccEEEEEec-CCCEEEEE
Q 014590 185 ---VFPSREGT-FMKGLCMRY--FDPEAVVGCEDGTARVFDMYS-------RKCSQIIRMHCAPVTSLSLS-EDQLIISG 250 (422)
Q Consensus 185 ---~~~~~~~~-~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 250 (422)
.+....+. +.....+.. .++.++..+.+|.++--.+.. |.....+..+ +.+..+... ++..++..
T Consensus 85 i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~ 163 (307)
T 1zi0_A 85 IVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLF 163 (307)
T ss_dssp GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEE
T ss_pred hhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEE
Confidence 11222232 222222221 234588899999999887632 1122223333 455554444 44677788
Q ss_pred cCCCcEEEEeCCCCccc---------------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 251 SSLGSIAISGLSSDQRL---------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
+.+|.+..++...-... ..|.++...+++..+++.+..|.++-.++.
T Consensus 164 T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 164 SAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp ETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 88898888776432111 455555544455678888888888877664
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.90 E-value=15 Score=38.39 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=32.5
Q ss_pred ceeeeeeEecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 311 VVYSLQHLQNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 311 ~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
.+.+++ ..++..++++-+.|+++|||++.+++++.+...
T Consensus 239 ~~vs~~-~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMI-FLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCE-EETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEee-ccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 445555 667888999999999999999999999887653
No 364
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=68.44 E-value=62 Score=28.46 Aligned_cols=213 Identities=8% Similarity=0.003 Sum_probs=105.9
Q ss_pred EeeccccceeEEEe-cCCeEEEEe-------------cCCeEEEEEcCC--CeEE-EeeeC--CC----ceeeEEEec--
Q 014590 107 QWKAHSVGVDQCRM-KRGLILTGV-------------GDKVMRLWSLEG--YKCV-EEYSL--PN----AASLVDFDF-- 161 (422)
Q Consensus 107 ~l~~H~~~v~~v~~-~~~~l~s~~-------------~dg~v~iwd~~~--~~~~-~~~~~--~~----~~~~~~~~~-- 161 (422)
.+++-....-.+.. ++|.+++++ .+|.|.++|.++ ++.. ..+.+ .. ...-+.+.+
T Consensus 44 ~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 44 LVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD 123 (355)
T ss_dssp ECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT
T ss_pred EeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC
Confidence 34442233445555 677666655 689999999873 2221 12222 11 122255555
Q ss_pred CCC-eEE-Ee---cCCeEEEEECCCC--cee-eecCC---CceeeeEEEeeeCCeEEEec-----------------CCC
Q 014590 162 DES-KIV-GL---IGTRICIWRRNGL--RSV-FPSRE---GTFMKGLCMRYFDPEAVVGC-----------------EDG 213 (422)
Q Consensus 162 ~~~-~l~-~~---~~~~i~~w~~~~~--~~~-~~~~~---~~~~~~~~~~~~~~~l~~~~-----------------~d~ 213 (422)
++. +|+ +. .+.+|.+|+++.. ... ..... -.......+...+...++.. ..|
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCcc
Confidence 454 233 32 2567778776543 221 22211 11223344444444333322 124
Q ss_pred eEEEEeCCCcceeeeeecCCccEEEEEecCC-CEEE-EEcCCCcEEEEeCCC-Cccc--------cceEeEEEec-CCCE
Q 014590 214 TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSLGSIAISGLSS-DQRL--------TGIKTLCYNP-CSRL 281 (422)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~-s~~~dg~i~iwd~~~-~~~~--------~~v~~~~~~~-~~~~ 281 (422)
.|.-+|. ++. ..+...-..-+.++|+|+ +.++ +-+..+.|..|++.. +... ...-.+++.+ +|++
T Consensus 204 ~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 204 FVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp EEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCE
T ss_pred EEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcE
Confidence 5555554 332 222222345689999988 4544 446678999999863 3221 4556788888 5887
Q ss_pred EEEEeCC-CeEEEEECC--CCeeeeeecc---CCCceeeeeeEecCCCE
Q 014590 282 VFAGTTA-GYASCWDLR--TMKSLWETRI---SPNVVYSLQHLQNDTST 324 (422)
Q Consensus 282 l~~g~~d-g~i~iwd~~--~~~~~~~~~~---~~~~v~~l~~~s~~~~~ 324 (422)
.+++..+ +.|..|+.. .+..+.+++. ....+..+ +..+|+.
T Consensus 281 wva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v--~~ddG~~ 327 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVV--YAENGTV 327 (355)
T ss_dssp EEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEE--EEECSSS
T ss_pred EEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEE--EEcCCCE
Confidence 7766544 344444543 2344444432 22344444 3346653
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.54 E-value=62 Score=28.09 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=61.7
Q ss_pred CCeEEEecCCCeEEEEeCCCc-------ceeeeeecCCccEEEEEec-CCCEEEEEcCCCcEEEEeCC--CCccc-----
Q 014590 203 DPEAVVGCEDGTARVFDMYSR-------KCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLS--SDQRL----- 267 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~--~~~~~----- 267 (422)
.+.++..+.+|.++--.+..- .....++. .+.+..+... .+..++..+..|.+..+... .-...
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 456999999999998876432 12222333 3445444444 44678888889998888766 22111
Q ss_pred ----------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 268 ----------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 268 ----------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
..|.++...+++.+++..+..|.++.-.+.
T Consensus 188 Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 188 GVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 456666665666789999999998887654
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.35 E-value=28 Score=33.12 Aligned_cols=60 Identities=20% Similarity=0.122 Sum_probs=42.8
Q ss_pred cceEeEEEecCCCEEEEEeCC------------CeEEEEECCCCeeeeeeccCC-CceeeeeeEecCCCEEEEE
Q 014590 268 TGIKTLCYNPCSRLVFAGTTA------------GYASCWDLRTMKSLWETRISP-NVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~d------------g~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~s~~~~~l~s~ 328 (422)
...-.|+|+|.|+++++-..+ +.+.+.+..+++..+-+.++. ..++.++ |+||++.|+..
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~-fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGIS-FSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEE-ECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCee-ECCCCCEEEEE
Confidence 455778999999976665432 346667777777665555543 6889998 99999988765
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=62.34 E-value=75 Score=27.27 Aligned_cols=174 Identities=10% Similarity=0.030 Sum_probs=99.4
Q ss_pred eEEEEecCCeEEEEEcCCCeE-------EEe--eeCCCceeeEEEec-CCCeEEEecCCeEEEEECCCC---------ce
Q 014590 124 LILTGVGDKVMRLWSLEGYKC-------VEE--YSLPNAASLVDFDF-DESKIVGLIGTRICIWRRNGL---------RS 184 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~~-------~~~--~~~~~~~~~~~~~~-~~~~l~~~~~~~i~~w~~~~~---------~~ 184 (422)
++++.+.+|.|+--.+...+. +.. +...+....+.... ....++.+..|.++-.....- ..
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~ 89 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQN 89 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CB
T ss_pred EEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcC
Confidence 788899999999887654321 111 22222333333333 333444888888777765321 11
Q ss_pred ---eeecCCCc-eeeeEEEee--eCCeEEEecCCCeEEEEeCCC-------cceeeeeecCCccEEEEEec-CCCEEEEE
Q 014590 185 ---VFPSREGT-FMKGLCMRY--FDPEAVVGCEDGTARVFDMYS-------RKCSQIIRMHCAPVTSLSLS-EDQLIISG 250 (422)
Q Consensus 185 ---~~~~~~~~-~~~~~~~~~--~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 250 (422)
.+....+. +........ ....++..+..|.++...+.. |.....+.. .+.+..+... ++..++..
T Consensus 90 i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~ 168 (312)
T 1suu_A 90 ISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICL 168 (312)
T ss_dssp GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEE
T ss_pred hhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEE
Confidence 11222222 222222221 234588889999999887632 222223333 4555555554 45778888
Q ss_pred cCCCcEEEEeCCCCccc---------------cceEeEEEecCCCEEEEEeCCCeEEEEECCC
Q 014590 251 SSLGSIAISGLSSDQRL---------------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 298 (422)
+.+|.+..++...-... ..|.++..-+++..+++.+..|..+..++..
T Consensus 169 T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 169 SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 99999988876542111 4555555545566788888889888887753
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.43 E-value=15 Score=35.75 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=28.0
Q ss_pred ecCCCEEEEEecCCeEEEEECCCCceEEEeee
Q 014590 319 QNDTSTLVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 319 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
..+..++++-+.|.++|+|++.+++++.+...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35678999999999999999999998887765
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=57.58 E-value=92 Score=26.72 Aligned_cols=177 Identities=11% Similarity=0.038 Sum_probs=97.4
Q ss_pred cCCCeEE-EecCCeEEEEECCCCcee---------eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC---C-----
Q 014590 161 FDESKIV-GLIGTRICIWRRNGLRSV---------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY---S----- 222 (422)
Q Consensus 161 ~~~~~l~-~~~~~~i~~w~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~----- 222 (422)
++...++ .+.+|.|+--.+..-... .....+..............++..+..|.++-.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 3444455 888888888765432211 111233332233333344557777788887665542 1
Q ss_pred -ccee---eeeecCCccEEEEEec----CCCEEEEEcCCCcEEEEeCCCCccc-------------cceEeEEEecCCCE
Q 014590 223 -RKCS---QIIRMHCAPVTSLSLS----EDQLIISGSSLGSIAISGLSSDQRL-------------TGIKTLCYNPCSRL 281 (422)
Q Consensus 223 -~~~~---~~~~~~~~~v~~l~~~----~~~~l~s~~~dg~i~iwd~~~~~~~-------------~~v~~~~~~~~~~~ 281 (422)
|.++ -.+.. ...|..+... ++..++..+..|.++...+...... ..+..+.....+..
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence 1111 11222 2344444332 3467888899999988876432211 45555555555667
Q ss_pred EEEEeCCCeEEEEECCCC---------eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 282 VFAGTTAGYASCWDLRTM---------KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 282 l~~g~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
++..+.+|.+..+....- .....+.. ...|.++. .-.++..+++.+..|..+..++.
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~-~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVL-SVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEE-ECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEE-EECCCCeEEEEECCCceEEEEHH
Confidence 888899999888876531 12222332 23455554 33445667788888888887764
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.83 E-value=63 Score=30.55 Aligned_cols=61 Identities=20% Similarity=0.101 Sum_probs=44.4
Q ss_pred cceEeEEEecCCCEEEEEeC------------CCeEEEEECCCCeeeeeeccC-CCceeeeeeEecCCCEEEEEe
Q 014590 268 TGIKTLCYNPCSRLVFAGTT------------AGYASCWDLRTMKSLWETRIS-PNVVYSLQHLQNDTSTLVVGG 329 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~s~~~~~l~s~~ 329 (422)
.....|.|+++|.+.++... ...+..++..+++...-+.+. ...++.++ |+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGia-fSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGIS-FSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEE-ECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCE-ECCCCCEEEEEE
Confidence 77888999999987774332 225777787778766555443 35789998 999999887764
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=50.03 E-value=1.3e+02 Score=26.05 Aligned_cols=174 Identities=10% Similarity=0.006 Sum_probs=94.5
Q ss_pred eEEEEecCCeEEEEEcCCCe----EEEeeeCCCceeeEEE-ecCCCeEEEecCCeEEEEECCC---------Cce---ee
Q 014590 124 LILTGVGDKVMRLWSLEGYK----CVEEYSLPNAASLVDF-DFDESKIVGLIGTRICIWRRNG---------LRS---VF 186 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~w~~~~---------~~~---~~ 186 (422)
++++.+.+|.|+--.+...+ ....+........+.. +.....++.+..|.+.-..... +.. .+
T Consensus 7 ~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i 86 (323)
T 1wp5_A 7 VIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANII 86 (323)
T ss_dssp EEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTS
T ss_pred EEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhcc
Confidence 77888889999876554211 1111222233333333 3334444488888876665421 221 12
Q ss_pred ecCCCc-eeeeEEEeee--CCeEEEecCCCeEEEEeCCC--------cceeeeeecCCccEEEEEec-CCCEEEEEcCCC
Q 014590 187 PSREGT-FMKGLCMRYF--DPEAVVGCEDGTARVFDMYS--------RKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLG 254 (422)
Q Consensus 187 ~~~~~~-~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~--------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg 254 (422)
....+. +.....+..+ ++.++..+.+|.++--.+.. |.....+... +.+..+... +++.++..+.+|
T Consensus 87 ~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G 165 (323)
T 1wp5_A 87 PIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNG 165 (323)
T ss_dssp CCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTS
T ss_pred CCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCC
Confidence 222233 2333333221 34588999999999887632 2122223322 455554444 446788888899
Q ss_pred cEEEEeCCCCccc---------------cceEeEEEecCCC-EEEEEeCCCeEEEEECCC
Q 014590 255 SIAISGLSSDQRL---------------TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRT 298 (422)
Q Consensus 255 ~i~iwd~~~~~~~---------------~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~ 298 (422)
.+..++...-... ..|.++..-+++. .++..+..|..+..++..
T Consensus 166 ~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 166 YALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred cEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 9888876432111 4455655444444 788888888877776653
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=45.84 E-value=1.3e+02 Score=25.15 Aligned_cols=110 Identities=11% Similarity=0.092 Sum_probs=58.6
Q ss_pred ccceeEEEec--CC-eEEEEecCCeEEEEEcCCCe------EEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCC
Q 014590 112 SVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYK------CVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG 181 (422)
Q Consensus 112 ~~~v~~v~~~--~~-~l~s~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~ 181 (422)
.+.|..+... ++ +++..+.+|.++...+.... ....+...+....+........++ .+..|.+..++...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 3445554323 33 89999999999999876532 222233233333333333444454 88999988887542
Q ss_pred Cc---------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC
Q 014590 182 LR---------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY 221 (422)
Q Consensus 182 ~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 221 (422)
-. .......+..+..+.....+..++..+..|.++...+.
T Consensus 147 ip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 147 VPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred CCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 11 11222222222222222233457777778887777653
No 373
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=45.43 E-value=1.8e+02 Score=26.58 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=53.4
Q ss_pred cEEEEEecCCC--EEEEEcCCCcEEEEeCCCCc---cc----------------cceEeEEEecC----CCEEEEEeC--
Q 014590 235 PVTSLSLSEDQ--LIISGSSLGSIAISGLSSDQ---RL----------------TGIKTLCYNPC----SRLVFAGTT-- 287 (422)
Q Consensus 235 ~v~~l~~~~~~--~l~s~~~dg~i~iwd~~~~~---~~----------------~~v~~~~~~~~----~~~l~~g~~-- 287 (422)
.-+.|+|.|+. .++++...|.|++++..... .+ .....|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 34688888874 46666778999999753221 11 24677999986 333333222
Q ss_pred C----------CeEEEEECCC----------Ceeeeeec--cCCCceeeeeeEecCCCEEEEEec
Q 014590 288 A----------GYASCWDLRT----------MKSLWETR--ISPNVVYSLQHLQNDTSTLVVGGI 330 (422)
Q Consensus 288 d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~l~~~s~~~~~l~s~~~ 330 (422)
+ ..|.-|.+.. .+.+.++. .....-..|+ |.|||.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~-fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLL-FGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEE-ECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEe-ECCCCcEEEEeCC
Confidence 1 1344455432 12232322 1112356788 9999987666554
No 374
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=43.44 E-value=1.9e+02 Score=26.29 Aligned_cols=107 Identities=11% Similarity=-0.105 Sum_probs=58.1
Q ss_pred ceeeEEeeccccceeEEEe-cCCeEEEEecCC-eEEEEEcCCCeEE--EeeeC-------CCceeeEEEecC---CCeEE
Q 014590 102 RIDIDQWKAHSVGVDQCRM-KRGLILTGVGDK-VMRLWSLEGYKCV--EEYSL-------PNAASLVDFDFD---ESKIV 167 (422)
Q Consensus 102 ~~~~~~l~~H~~~v~~v~~-~~~~l~s~~~dg-~v~iwd~~~~~~~--~~~~~-------~~~~~~~~~~~~---~~~l~ 167 (422)
+..+..+...-...+.++| ++|.|+.+...+ .|++++..+++.. ..+.. .....-++++|+ +..|.
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred CeEEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 3455555555566789999 777555556664 7988887655432 22221 122234899995 55554
Q ss_pred -Eec-------------CCeEEEEECCCC-------ceeee---cCCCceeeeEEEeeeCCeEEE
Q 014590 168 -GLI-------------GTRICIWRRNGL-------RSVFP---SREGTFMKGLCMRYFDPEAVV 208 (422)
Q Consensus 168 -~~~-------------~~~i~~w~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~l~~ 208 (422)
+.. ...|.-++.... +.++. ....|....+.+.+++...++
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 332 234555654321 12222 122355556677666665443
No 375
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=43.26 E-value=1.7e+02 Score=25.76 Aligned_cols=173 Identities=11% Similarity=0.086 Sum_probs=95.1
Q ss_pred eEEEEecCCeEEEEEcCC---------CeEEEeeeCCCceeeEEEecCCCeEE-EecCCeEEEEECCC---------Cce
Q 014590 124 LILTGVGDKVMRLWSLEG---------YKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG---------LRS 184 (422)
Q Consensus 124 ~l~s~~~dg~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~~---------~~~ 184 (422)
++++.+.+|.|+--.+.+ |..-..++.......+........++ .+..|.+.-+.... +..
T Consensus 9 ~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~ 88 (370)
T 3l6v_A 9 VVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRP 88 (370)
T ss_dssp EEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcC
Confidence 888899999998765432 22223333333333333344444444 78888777665321 111
Q ss_pred e---eecCC-CceeeeEEEeee--CCeEEEecCCCeEEEEeCCC-------cceeeeeecCCccEEEEEec-CCCEEEEE
Q 014590 185 V---FPSRE-GTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYS-------RKCSQIIRMHCAPVTSLSLS-EDQLIISG 250 (422)
Q Consensus 185 ~---~~~~~-~~~~~~~~~~~~--~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 250 (422)
+ +.... ..++....+..+ +..++.++..|.++-..+.. |.....+.. .+.+..+... ++..++..
T Consensus 89 i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~ 167 (370)
T 3l6v_A 89 IINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLF 167 (370)
T ss_dssp GGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEE
T ss_pred HhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEE
Confidence 1 12122 233333333222 34699999999999887532 222222333 3444444444 44677778
Q ss_pred cCCCcEEEEeCCCCccc---------------cceEeEEEec-----------------------------------CCC
Q 014590 251 SSLGSIAISGLSSDQRL---------------TGIKTLCYNP-----------------------------------CSR 280 (422)
Q Consensus 251 ~~dg~i~iwd~~~~~~~---------------~~v~~~~~~~-----------------------------------~~~ 280 (422)
+.+|.+..++...-... ..|.++...+ ++.
T Consensus 168 T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~ 247 (370)
T 3l6v_A 168 ASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVA 247 (370)
T ss_dssp ETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------------C
T ss_pred eCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCc
Confidence 88888888875432211 4455554443 345
Q ss_pred EEEEEeCCCeEEEEECC
Q 014590 281 LVFAGTTAGYASCWDLR 297 (422)
Q Consensus 281 ~l~~g~~dg~i~iwd~~ 297 (422)
.+++.+..|..+...+.
T Consensus 248 ~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 248 YILTATENGYGKRTPLA 264 (370)
T ss_dssp EEEEEETTSEEEEEEGG
T ss_pred eEEEeeCCCCEEEEEHH
Confidence 78888888888877765
No 376
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=42.46 E-value=1.8e+02 Score=25.80 Aligned_cols=221 Identities=10% Similarity=0.060 Sum_probs=110.9
Q ss_pred ccceeEEEecCCeEEEEecCCeEEEEEcCC-Ce----------EEEeeeCCCceeeEEEecCCCeEE-EecC-CeEEEEE
Q 014590 112 SVGVDQCRMKRGLILTGVGDKVMRLWSLEG-YK----------CVEEYSLPNAASLVDFDFDESKIV-GLIG-TRICIWR 178 (422)
Q Consensus 112 ~~~v~~v~~~~~~l~s~~~dg~v~iwd~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-~~i~~w~ 178 (422)
...|..++.-..+.+.-..||.|..|=... ++ ....+.......+..++.-..+.+ ...+ +.|+.|-
T Consensus 15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 94 (406)
T ss_dssp CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence 345666665445555556788888885432 11 111222212223444444444433 4444 5899996
Q ss_pred CCCCc--------ee-----eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-cce----------eeeeec-CC
Q 014590 179 RNGLR--------SV-----FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKC----------SQIIRM-HC 233 (422)
Q Consensus 179 ~~~~~--------~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~----------~~~~~~-~~ 233 (422)
....- .. .....+ ..+..+..-....+.-..+|.|..|-... +++ ...+.. ..
T Consensus 95 ~n~~GqLG~g~~~~~~~p~~v~~l~~--~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~ 172 (406)
T 4d9s_A 95 WGDFGRLGHGNSSDLFTPLPIKALHG--IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG 172 (406)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTT--CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTT
T ss_pred CCCCcCCCCCCCCccccceEecccCC--CCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCC
Confidence 43211 00 111111 12444444445556667889999996532 111 111111 12
Q ss_pred ccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEE
Q 014590 234 APVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCW 294 (422)
Q Consensus 234 ~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iw 294 (422)
..|..++... .+.+.-..+|.+..|-....-.+ ..|..++. -....++-..+|.|+.|
T Consensus 173 ~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~ht~~l~~~G~v~~w 249 (406)
T 4d9s_A 173 IRIKMVAAGA-EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--GWRHTISVSYSGALYTY 249 (406)
T ss_dssp CCEEEEEECS-SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--CSSEEEEEETTCCEEEE
T ss_pred CcEEEEecCC-CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--CCCcEEEEcCCCCEEEe
Confidence 2566666533 45555568999999964432211 23444443 33445555678889998
Q ss_pred ECCCCee-----------eeeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 295 DLRTMKS-----------LWETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 295 d~~~~~~-----------~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
-....-. ...+.. ....|..++ ....+.+.-..||.|+.|-..
T Consensus 250 G~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~---~G~~hs~alt~~G~v~~wG~n 304 (406)
T 4d9s_A 250 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS---GGWRHTMALTSDGKLYGWGWN 304 (406)
T ss_dssp ECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEE---ECSSEEEEEETTSCEEEEECC
T ss_pred eCCCCCCCCCCCCcCccccEEecccCCCCEEEEE---ecCCEEEEEcCCCeEEEeeCC
Confidence 6542110 111111 122355554 344455566788999999643
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.65 E-value=1.9e+02 Score=24.92 Aligned_cols=135 Identities=11% Similarity=0.048 Sum_probs=74.1
Q ss_pred CCCeEE-EecCCeEEEEECCCCc-------eeeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCC--C----cc---
Q 014590 162 DESKIV-GLIGTRICIWRRNGLR-------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY--S----RK--- 224 (422)
Q Consensus 162 ~~~~l~-~~~~~~i~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~--~----~~--- 224 (422)
++..++ .+.+|.++.-.+.... .......+..............++..+..|.+..+... . +.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 355555 9999999998765421 11222223322222333344557778888888777665 2 11
Q ss_pred --eeeeeecCCccEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc----------------cceEeEEEecCCCEEEEE
Q 014590 225 --CSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL----------------TGIKTLCYNPCSRLVFAG 285 (422)
Q Consensus 225 --~~~~~~~~~~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~----------------~~v~~~~~~~~~~~l~~g 285 (422)
..-.+. ....|.++... ++..++..+..|.++.-.+..-... ..+..+....+...++..
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~ 266 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAV 266 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEE
Confidence 111222 23456666554 4578889999999988775432221 223333333334455556
Q ss_pred eCCCeEEEEECC
Q 014590 286 TTAGYASCWDLR 297 (422)
Q Consensus 286 ~~dg~i~iwd~~ 297 (422)
+.+|.+.-++..
T Consensus 267 T~~G~~ir~~~~ 278 (327)
T 3uc1_A 267 TSGGGVIRTAAR 278 (327)
T ss_dssp EGGGCEEEEEGG
T ss_pred cCCCeEEEEehh
Confidence 666666666554
No 378
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=37.03 E-value=2.5e+02 Score=25.69 Aligned_cols=53 Identities=9% Similarity=0.018 Sum_probs=34.3
Q ss_pred cceEeEEEecCCC-EEEEEeCCCeEEEEECCCC---eeeeeec---------cCCCceeeeeeEecC
Q 014590 268 TGIKTLCYNPCSR-LVFAGTTAGYASCWDLRTM---KSLWETR---------ISPNVVYSLQHLQND 321 (422)
Q Consensus 268 ~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~---~~~~~~~---------~~~~~v~~l~~~s~~ 321 (422)
.....|+|.|+|. .|+++...|.|++++.... ..+..+. ........|+ ++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia-~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLA-FHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEE-ECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeE-eCCC
Confidence 4678899999996 5666678899999975422 1222211 1134567888 8876
No 379
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=35.37 E-value=2e+02 Score=24.08 Aligned_cols=94 Identities=11% Similarity=-0.004 Sum_probs=59.9
Q ss_pred CCeEEEecCCCeEEEEeCCCc------ceeeeeecCCccEEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc--------
Q 014590 203 DPEAVVGCEDGTARVFDMYSR------KCSQIIRMHCAPVTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-------- 267 (422)
Q Consensus 203 ~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-------- 267 (422)
.+.++..+.+|.++-..+..- .....++. .+.+..+.... +..++..+..|.+..++...-...
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 345888999999998876432 11222332 34455554443 367888888999888765321111
Q ss_pred -------cceEeEEEecCCCEEEEEeCCCeEEEEECC
Q 014590 268 -------TGIKTLCYNPCSRLVFAGTTAGYASCWDLR 297 (422)
Q Consensus 268 -------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 297 (422)
..|..+...+++..++..+..|.++...+.
T Consensus 159 ~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 159 GIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp CCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 445555555566788888889988887765
No 380
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.54 E-value=2.6e+02 Score=24.61 Aligned_cols=219 Identities=10% Similarity=0.030 Sum_probs=113.9
Q ss_pred eeEEEecCCeEEEEecCCeEEEEEcCCC-----------eEEEeeeC--CCceeeEEEecCCCeEE-EecCCeEEEEECC
Q 014590 115 VDQCRMKRGLILTGVGDKVMRLWSLEGY-----------KCVEEYSL--PNAASLVDFDFDESKIV-GLIGTRICIWRRN 180 (422)
Q Consensus 115 v~~v~~~~~~l~s~~~dg~v~iwd~~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~~~i~~w~~~ 180 (422)
|..++.-....+.-..||.|..|-.... .....+.. ......++++.-..+.+ ...+|.|..|-..
T Consensus 55 i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 55 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC
T ss_pred eEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC
Confidence 3344433445555667888888854321 11111221 11233356665555544 7889999999653
Q ss_pred CCce----------e---eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-cc----------eeeeee-cCCcc
Q 014590 181 GLRS----------V---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RK----------CSQIIR-MHCAP 235 (422)
Q Consensus 181 ~~~~----------~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~----------~~~~~~-~~~~~ 235 (422)
..-+ . .....+ ..+..+..-....+.-..+|.|..|-... ++ ....+. .....
T Consensus 135 ~~GqLG~g~~~~~~~p~~v~~l~~--~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~ 212 (389)
T 3kci_A 135 EDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 212 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTT--SCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSC
T ss_pred CCCcCCCCCCccCcCCeEecccCC--CeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCe
Confidence 2110 0 111111 12444444445555666789999996532 11 001111 12235
Q ss_pred EEEEEecC-CCEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEE
Q 014590 236 VTSLSLSE-DQLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWD 295 (422)
Q Consensus 236 v~~l~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd 295 (422)
|..++... +...+.-..||.|..|-....-.+ ..|..++.. ....++-..+|.|+.|-
T Consensus 213 v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG 290 (389)
T 3kci_A 213 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWG 290 (389)
T ss_dssp EEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEe
Confidence 66776654 356666678999999965432111 235555543 33445557789999996
Q ss_pred CCCCe-----------eeeeecc-CCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 296 LRTMK-----------SLWETRI-SPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 296 ~~~~~-----------~~~~~~~-~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
....- ....+.. ....|..++ ....+.+.-..||.|+.|-..
T Consensus 291 ~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia---~G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 291 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA---TGSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEE---ECSSEEEEEETTCCEEEEECC
T ss_pred CCCCCCCCCCCCccccCCeEeccCCCCCEEEEE---eccCeEEEECCCCCEEEeeCC
Confidence 54210 0111111 113455555 344455666789999999754
No 381
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=31.16 E-value=2.8e+02 Score=24.63 Aligned_cols=218 Identities=13% Similarity=0.037 Sum_probs=110.4
Q ss_pred ceeEEEecCCeEEEEecCCeEEEEEcCC-CeE------------EEeeeCCCceeeEEEecCCCe-EEEecCCeEEEEEC
Q 014590 114 GVDQCRMKRGLILTGVGDKVMRLWSLEG-YKC------------VEEYSLPNAASLVDFDFDESK-IVGLIGTRICIWRR 179 (422)
Q Consensus 114 ~v~~v~~~~~~l~s~~~dg~v~iwd~~~-~~~------------~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~w~~ 179 (422)
.|..|+.-..+.+.-..||.|..|=... +++ ...+.... .+..++.-..+ ++...+|.|..|-.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~--~i~~va~G~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPG--KALCISAGDSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSS--CEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCC--CEEEEEcCcCeEEEEeCCCeEEEEeC
Confidence 3555555444666667889999996432 110 01111111 23344443333 34778899999975
Q ss_pred --CCCcee-----------eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCCc-c---------------------
Q 014590 180 --NGLRSV-----------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-K--------------------- 224 (422)
Q Consensus 180 --~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~--------------------- 224 (422)
...-.+ .....+ ..+..+..-....+.-..+|.|..|-.... +
T Consensus 154 ~~n~~GqlG~~~~~~~~~p~~~~~~--~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~ 231 (423)
T 3mvd_K 154 FRDSHGNMGLTIDGNKRTPIDLMEG--TVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLL 231 (423)
T ss_dssp EECSSSEEESBTTBCEEEEEESSTT--CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTS
T ss_pred CCCCCCCcCcCCCCCCceeeEecCC--CcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCccccccccccccccccc
Confidence 221111 111111 124444444445556667899999964321 1
Q ss_pred -eeeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc------------------cceEeEEEecCCCEEEEE
Q 014590 225 -CSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL------------------TGIKTLCYNPCSRLVFAG 285 (422)
Q Consensus 225 -~~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------------~~v~~~~~~~~~~~l~~g 285 (422)
+..........|..++......++.-..+|.+..|-......+ ..|..++. -....++-
T Consensus 232 ~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~--G~~ht~al 309 (423)
T 3mvd_K 232 RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG--GQHHTVIL 309 (423)
T ss_dssp SCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE--CSSEEEEE
T ss_pred CCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc--ccCeEEEE
Confidence 1111111223455565544444444468899999965432211 23444443 33455555
Q ss_pred eCCCeEEEEECCCC------------eeeeeeccCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 286 TTAGYASCWDLRTM------------KSLWETRISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 286 ~~dg~i~iwd~~~~------------~~~~~~~~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
..+|.|+.|-.... .....+..-...|..|+ .. ..+-+.-..||.|+.|-..
T Consensus 310 t~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia-~G--~~hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 310 TTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVG-CG--EVCSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp ETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEE-EE--TTEEEEEETTSCEEEEECC
T ss_pred eCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEE-cC--CCeEEEEcCCCCEEEECCC
Confidence 67899999965321 01111222222566665 32 3444445789999999654
No 382
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=30.11 E-value=3.6e+02 Score=25.45 Aligned_cols=172 Identities=13% Similarity=0.057 Sum_probs=0.0
Q ss_pred CCeEE-EecCCeEEEEECCCCceeeecCCCceeeeEEEeeeCCeE---EEecCCCeEEEEeCCCcc-----eeeeeecCC
Q 014590 163 ESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA---VVGCEDGTARVFDMYSRK-----CSQIIRMHC 233 (422)
Q Consensus 163 ~~~l~-~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~d~~i~iwd~~~~~-----~~~~~~~~~ 233 (422)
...++ ++.||.++.++.. +.+.+.-........+.......+. -.-.-||...+.|...+. .+..+..-.
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG 163 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGG 163 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSC
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCC
Q ss_pred ccEEEEEec-CCCEEEEEcCCCcEEEEeCCCCccc-----cceEeEEEecCCCEEEEEeC-------CCeEEEEECCCCe
Q 014590 234 APVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRL-----TGIKTLCYNPCSRLVFAGTT-------AGYASCWDLRTMK 300 (422)
Q Consensus 234 ~~v~~l~~~-~~~~l~s~~~dg~i~iwd~~~~~~~-----~~v~~~~~~~~~~~l~~g~~-------dg~i~iwd~~~~~ 300 (422)
..+.+|.+. |+. ...+|.+.+.... ..-..+.--.++++++.-+. ...|++.|+.+|.
T Consensus 164 ~~~yALDVT~P~~---------p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~ 234 (570)
T 3hx6_A 164 KGLFALDVTDPAN---------IKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGA 234 (570)
T ss_dssp SEEEEEECSSGGG---------CEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCC
T ss_pred cEEEEEECCCCCC---------CceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCc
Q ss_pred eeeeeccCC-----CceeeeeeEecCCC----EEEEEecCCeEEEEECCCCce
Q 014590 301 SLWETRISP-----NVVYSLQHLQNDTS----TLVVGGIDGVLRVLDQNTGEV 344 (422)
Q Consensus 301 ~~~~~~~~~-----~~v~~l~~~s~~~~----~l~s~~~dg~v~vwd~~~~~~ 344 (422)
.++++.... ..+..+..+..++. ++..|...|.|.-+|+.....
T Consensus 235 li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 235 ITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGKV 287 (570)
T ss_dssp EEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSSC
T ss_pred eEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCCc
No 383
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.67 E-value=1.6e+02 Score=27.91 Aligned_cols=52 Identities=8% Similarity=0.178 Sum_probs=33.5
Q ss_pred cEEEEEecCCCEEEEEcC-------------CCcEEEEeCCCCccc--------cceEeEEEecCCCEEEEEe
Q 014590 235 PVTSLSLSEDQLIISGSS-------------LGSIAISGLSSDQRL--------TGIKTLCYNPCSRLVFAGT 286 (422)
Q Consensus 235 ~v~~l~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~--------~~v~~~~~~~~~~~l~~g~ 286 (422)
....|.|.++..|..+.. ...+..++..+++.. ..++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 346788887643333221 124666666666544 4579999999999888764
No 384
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=28.19 E-value=3.1e+02 Score=24.23 Aligned_cols=219 Identities=11% Similarity=0.055 Sum_probs=109.6
Q ss_pred ceeEEEecCCeEEEEecC-CeEEEEEcCCC---------e--EEEeeeCCCceeeEEEecCCCeE-EEecCCeEEEEECC
Q 014590 114 GVDQCRMKRGLILTGVGD-KVMRLWSLEGY---------K--CVEEYSLPNAASLVDFDFDESKI-VGLIGTRICIWRRN 180 (422)
Q Consensus 114 ~v~~v~~~~~~l~s~~~d-g~v~iwd~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~i~~w~~~ 180 (422)
.|..++.-..+.+.-..| +.|..|-.... . ....+.......+..++.-..+. +...+|.|+.|-..
T Consensus 69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCC
Confidence 466666544433333444 58988853221 1 11112222223344454444444 47889999999754
Q ss_pred CCcee-------------eecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeCCC-cce----------eeeee-cCCcc
Q 014590 181 GLRSV-------------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKC----------SQIIR-MHCAP 235 (422)
Q Consensus 181 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~----------~~~~~-~~~~~ 235 (422)
..-++ .....+ ..+..+..-....+.-..+|.|..|-... ++. ...+. .....
T Consensus 149 ~~GqLG~g~~~~~~~p~~v~~~~~--~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~ 226 (406)
T 4d9s_A 149 QNGQLGLGDTEDSLVPQKIQAFEG--IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 226 (406)
T ss_dssp TTSTTCSSSCCCEEEEEECGGGTT--CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCC
T ss_pred CCccCCCCCCCCcccceEecccCC--CcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCce
Confidence 32110 011111 12444444444555566889999996432 110 01111 11235
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEeCCCCccc-------------------cceEeEEEecCCCEEEEEeCCCeEEEEEC
Q 014590 236 VTSLSLSEDQLIISGSSLGSIAISGLSSDQRL-------------------TGIKTLCYNPCSRLVFAGTTAGYASCWDL 296 (422)
Q Consensus 236 v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 296 (422)
|..++... ...+.-..+|.|..|-....-.+ ..|..++. -....++-..||.|+.|-.
T Consensus 227 i~~va~G~-~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~--G~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 227 MSMVACGW-RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG--GWRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp EEEEEECS-SEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEEC
T ss_pred EEEEEECC-CcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe--cCCEEEEEcCCCeEEEeeC
Confidence 66665533 44455568899999975432221 23444443 3345555578899999965
Q ss_pred CCC-ee----------eeeec-cCCCceeeeeeEecCCCEEEEEecCCeEEEEECC
Q 014590 297 RTM-KS----------LWETR-ISPNVVYSLQHLQNDTSTLVVGGIDGVLRVLDQN 340 (422)
Q Consensus 297 ~~~-~~----------~~~~~-~~~~~v~~l~~~s~~~~~l~s~~~dg~v~vwd~~ 340 (422)
... ++ ...+. .....|..++ ....+.+.-..||.|+.|-..
T Consensus 304 n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va---~G~~hs~alt~~G~v~~wG~n 356 (406)
T 4d9s_A 304 NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS---CGWRHTLAVTERNNVFAWGRG 356 (406)
T ss_dssp CTTSTTCSSSSSCEEEEEEECCGGGCCEEEEE---ECSSEEEEEETTSCEEEEECC
T ss_pred CCCCCCCCCCCCCCccCEEEeccCCCcEEEEE---eCCCeEEEEeCCCCEEEecCC
Confidence 431 10 01111 1113455555 344555666788999999653
No 385
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=27.65 E-value=49 Score=20.96 Aligned_cols=33 Identities=12% Similarity=-0.044 Sum_probs=23.7
Q ss_pred Cc-cccccCHHHHHHHHcCC--ChHhHHHHHhhchh
Q 014590 21 RA-TIESLNGDIICMIFSSL--GFFDLVRCSAVCKS 53 (422)
Q Consensus 21 ~~-~~~~Lp~e~~~~i~~~l--~~~~l~~~~~v~~~ 53 (422)
++ +|..||.||-..|..-. +|..+.....++.+
T Consensus 5 ~~~wL~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 5 SKLFLDELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp SCCGGGGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 45 79999999999998755 66666655555433
No 386
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=24.65 E-value=91 Score=24.75 Aligned_cols=95 Identities=8% Similarity=0.009 Sum_probs=56.1
Q ss_pred CCCcEEEEeCCCCccc---cceEeEEEecCCCEEEE-EeCCCeEEEEECCCCeeeeeeccCCCceeeeeeEecCC---CE
Q 014590 252 SLGSIAISGLSSDQRL---TGIKTLCYNPCSRLVFA-GTTAGYASCWDLRTMKSLWETRISPNVVYSLQHLQNDT---ST 324 (422)
Q Consensus 252 ~dg~i~iwd~~~~~~~---~~v~~~~~~~~~~~l~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~s~~~---~~ 324 (422)
....+.+|.+..+.-+ ..+.+..|.....+-+. ...+|.|.+-+..++.++..+.. .+.... +.... .+
T Consensus 67 ng~~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~n---Gvv~~~-C~~s~~~Q~w 142 (206)
T 1sr4_A 67 NGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGN---GLIHDI-CSLDKLAQEF 142 (206)
T ss_dssp TSEEEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETT---EEEEEC-CCTTCGGGCE
T ss_pred CCCEEEEEecCCCcceeeecccccCCcCCcceeEEEeecCCCEEEEEECCCCceeeeccC---CeEEec-CCCCCcccEE
Confidence 3445678888766554 22222233323334444 56788899999999888876432 233222 22211 13
Q ss_pred EEEEecCCeEEEEECCCCceEEEeee
Q 014590 325 LVVGGIDGVLRVLDQNTGEVLSRCVM 350 (422)
Q Consensus 325 l~s~~~dg~v~vwd~~~~~~~~~~~~ 350 (422)
=+.-+.+|.|.|=++.+++|+.....
T Consensus 143 siiPttnGAVQIKnvatg~CL~t~~~ 168 (206)
T 1sr4_A 143 ELLPTDSGAVVIKSVSQGRCVTYNPV 168 (206)
T ss_dssp EEEEBTTSCEEEEETTTCCEEEECSS
T ss_pred EEecCCCccEEEEECCCCccCCccCC
Confidence 33344578888889999999987543
No 387
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.97 E-value=2.8e+02 Score=25.62 Aligned_cols=67 Identities=18% Similarity=0.285 Sum_probs=42.6
Q ss_pred ceEeEEEecC----C--CEEEEEeCCCeEEEEECC-CC-------eeeeeecc--CCCceeeeeeEecCCCEEEEEecCC
Q 014590 269 GIKTLCYNPC----S--RLVFAGTTAGYASCWDLR-TM-------KSLWETRI--SPNVVYSLQHLQNDTSTLVVGGIDG 332 (422)
Q Consensus 269 ~v~~~~~~~~----~--~~l~~g~~dg~i~iwd~~-~~-------~~~~~~~~--~~~~v~~l~~~s~~~~~l~s~~~dg 332 (422)
..++|+...- + ..++.|+.+|.|.-.-+. .+ ..+.++.. ...+|..|. ++++..+|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~-l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAME-LSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEE-EETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEE-EcCCCCEEEEEECCe
Confidence 4567666532 3 457789999986543332 21 12223332 346889998 999999999999888
Q ss_pred eEEE
Q 014590 333 VLRV 336 (422)
Q Consensus 333 ~v~v 336 (422)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 388
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.49 E-value=4.1e+02 Score=23.55 Aligned_cols=175 Identities=14% Similarity=0.097 Sum_probs=88.8
Q ss_pred EEEecCCCeEE-EecCCeEEEEECCCCce--------------eeecCCCceeeeEEEeeeCCeEEEecCCCeEEEEeC-
Q 014590 157 VDFDFDESKIV-GLIGTRICIWRRNGLRS--------------VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM- 220 (422)
Q Consensus 157 ~~~~~~~~~l~-~~~~~~i~~w~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~- 220 (422)
..++.-+.+.+ ...+|.|..|-....-. ....... .+..+..-....+.-..||.|..|-.
T Consensus 78 ~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~---~i~~va~G~~hs~al~~~G~v~~wG~~ 154 (423)
T 3mvd_K 78 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPG---KALCISAGDSHSACLLEDGRVFAWGSF 154 (423)
T ss_dssp EEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSS---CEEEEEECSSEEEEEETTSCEEEEECE
T ss_pred eEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCC---CEEEEEcCcCeEEEEeCCCeEEEEeCC
Confidence 44544444444 78889999996533111 0001111 24445444455556678999999975
Q ss_pred -C-Ccce---------eeeeecCCccEEEEEecCCCEEEEEcCCCcEEEEeCCCCccc----------------------
Q 014590 221 -Y-SRKC---------SQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRL---------------------- 267 (422)
Q Consensus 221 -~-~~~~---------~~~~~~~~~~v~~l~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------------- 267 (422)
. .++. ..........|..++... ...+.-..+|.|+.|-....-.+
T Consensus 155 ~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p 233 (423)
T 3mvd_K 155 RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA-DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRP 233 (423)
T ss_dssp ECSSSEEESBTTBCEEEEEESSTTCCEEEEEECS-SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSC
T ss_pred CCCCCCcCcCCCCCCceeeEecCCCcEEEEecCC-CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCC
Confidence 2 2221 011111233566666533 45555568899999964321111
Q ss_pred --------cceEeEEEecCCCEEEEEeCCCeEEEEECCCCee-----------eeeeccCCCceeeeeeEecCCCEEEEE
Q 014590 268 --------TGIKTLCYNPCSRLVFAGTTAGYASCWDLRTMKS-----------LWETRISPNVVYSLQHLQNDTSTLVVG 328 (422)
Q Consensus 268 --------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~l~~~s~~~~~l~s~ 328 (422)
..|..++... ...++.-..+|.|+.|-....-. ..........|..++ ....+.+.-
T Consensus 234 ~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia---~G~~ht~al 309 (423)
T 3mvd_K 234 TQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIA---GGQHHTVIL 309 (423)
T ss_dssp EEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEE---ECSSEEEEE
T ss_pred eEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEE---cccCeEEEE
Confidence 2344444331 12222225788888886442110 011111123455554 344555666
Q ss_pred ecCCeEEEEEC
Q 014590 329 GIDGVLRVLDQ 339 (422)
Q Consensus 329 ~~dg~v~vwd~ 339 (422)
..||.|+.|-.
T Consensus 310 t~~G~v~~wG~ 320 (423)
T 3mvd_K 310 TTDLKCSVVGR 320 (423)
T ss_dssp ETTCCEEEEEC
T ss_pred eCCCcEEEEEC
Confidence 77899999864
No 389
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.29 E-value=3.3e+02 Score=22.39 Aligned_cols=133 Identities=13% Similarity=0.089 Sum_probs=73.6
Q ss_pred EEEecCCCeEEEEeCCCcce-eeeeecCCccEEEEE-ecCCCEEEEEcCCCcEEEEe---CCC----Cccc---------
Q 014590 206 AVVGCEDGTARVFDMYSRKC-SQIIRMHCAPVTSLS-LSEDQLIISGSSLGSIAISG---LSS----DQRL--------- 267 (422)
Q Consensus 206 l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~l~-~~~~~~l~s~~~dg~i~iwd---~~~----~~~~--------- 267 (422)
+++.+.+|.|+--....-.. ...++.. +.+..+. .+..+.++..+..|.++-+. +.. |..+
T Consensus 5 ~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 5 TIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 45667777777655432110 1123333 3333333 33345566667778766554 322 2211
Q ss_pred cceEeEEEecCCCEEEEEeCCCeEEEEECCC-------CeeeeeeccCCCceeeeeeEe-cCCCEEEEEecCCeEEEEEC
Q 014590 268 TGIKTLCYNPCSRLVFAGTTAGYASCWDLRT-------MKSLWETRISPNVVYSLQHLQ-NDTSTLVVGGIDGVLRVLDQ 339 (422)
Q Consensus 268 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~s-~~~~~l~s~~~dg~v~vwd~ 339 (422)
..|.++....++.+++.++..|.++...+.. +.....+... +.+-.+. .. .++..++..+.+|.+..++.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~-~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPV-VIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCE-ECCCTTCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEE-EecCCCCEEEEEcCCCeEEEEEH
Confidence 4566664434567788899999999887643 2333334332 3444443 33 24557888888998888887
Q ss_pred CC
Q 014590 340 NT 341 (422)
Q Consensus 340 ~~ 341 (422)
..
T Consensus 162 ~e 163 (256)
T 1zvt_A 162 SD 163 (256)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 390
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=21.81 E-value=1.4e+02 Score=23.17 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=25.0
Q ss_pred ccceeEEEecCC---eEEEEecCCeEEEEEcCCCeEE
Q 014590 112 SVGVDQCRMKRG---LILTGVGDKVMRLWSLEGYKCV 145 (422)
Q Consensus 112 ~~~v~~v~~~~~---~l~s~~~dg~v~iwd~~~~~~~ 145 (422)
..-+.++.|.++ .+++...+|++.++|.+-|+..
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 445666777655 6777778899999998877654
Done!