Query 014592
Match_columns 422
No_of_seqs 263 out of 1544
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:38:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1627 Translation elongation 100.0 1.5E-77 3.3E-82 502.4 10.1 156 264-422 1-160 (160)
2 PF00647 EF1G: Elongation fact 100.0 6.2E-65 1.3E-69 412.7 6.5 107 261-369 1-107 (107)
3 PLN02473 glutathione S-transfe 100.0 5.3E-31 1.1E-35 245.8 21.7 203 1-205 1-211 (214)
4 PLN02395 glutathione S-transfe 100.0 1.7E-30 3.8E-35 242.4 21.8 205 1-208 1-213 (215)
5 PRK09481 sspA stringent starva 100.0 2.6E-30 5.7E-35 241.0 21.9 192 3-205 11-202 (211)
6 PRK13972 GSH-dependent disulfi 100.0 4E-30 8.7E-35 240.3 20.7 200 3-209 2-209 (215)
7 KOG0867 Glutathione S-transfer 100.0 2.5E-29 5.3E-34 236.8 19.6 205 1-206 1-210 (226)
8 PRK10357 putative glutathione 100.0 3.8E-29 8.2E-34 231.2 20.5 198 3-204 1-199 (202)
9 PRK15113 glutathione S-transfe 100.0 4.3E-29 9.4E-34 233.3 20.5 198 3-207 6-210 (214)
10 PRK10542 glutathionine S-trans 100.0 3.7E-29 8E-34 230.9 19.4 194 3-206 1-198 (201)
11 COG0625 Gst Glutathione S-tran 100.0 1.6E-28 3.5E-33 228.8 21.1 194 3-200 1-199 (211)
12 TIGR01262 maiA maleylacetoacet 100.0 1.1E-28 2.4E-33 229.3 19.4 197 4-206 1-205 (210)
13 PRK11752 putative S-transferas 100.0 1.4E-27 3E-32 230.2 21.0 200 2-206 44-259 (264)
14 KOG0406 Glutathione S-transfer 99.9 1.2E-26 2.5E-31 214.4 20.1 196 3-207 10-213 (231)
15 KOG0868 Glutathione S-transfer 99.9 2.4E-25 5.3E-30 193.8 14.5 198 3-205 6-207 (217)
16 PLN02378 glutathione S-transfe 99.9 8.4E-25 1.8E-29 204.3 16.3 182 8-209 17-203 (213)
17 PRK10387 glutaredoxin 2; Provi 99.9 1.4E-24 2.9E-29 201.8 17.5 185 3-199 1-207 (210)
18 PTZ00057 glutathione s-transfe 99.9 1.8E-24 4E-29 200.8 17.2 186 3-207 5-201 (205)
19 TIGR00862 O-ClC intracellular 99.9 3.1E-23 6.6E-28 195.7 19.9 182 9-207 17-222 (236)
20 PLN02817 glutathione dehydroge 99.9 3.2E-23 7E-28 199.4 17.5 178 9-206 71-252 (265)
21 KOG1695 Glutathione S-transfer 99.9 1.1E-22 2.3E-27 186.8 17.8 197 2-208 3-203 (206)
22 PLN02907 glutamate-tRNA ligase 99.9 2.8E-22 6E-27 215.2 18.4 165 1-205 1-168 (722)
23 TIGR02182 GRXB Glutaredoxin, G 99.9 5.3E-22 1.1E-26 184.9 16.3 182 4-199 1-206 (209)
24 KOG4420 Uncharacterized conser 99.8 1.4E-19 3E-24 166.5 12.5 204 3-207 27-289 (325)
25 cd03181 GST_C_EFB1gamma GST_C 99.6 4.2E-15 9.1E-20 126.0 10.4 121 90-210 1-121 (123)
26 KOG1422 Intracellular Cl- chan 99.6 2.1E-14 4.6E-19 129.2 13.8 185 10-210 20-210 (221)
27 cd03044 GST_N_EF1Bgamma GST_N 99.6 1E-14 2.2E-19 113.3 8.6 73 3-76 1-74 (75)
28 cd03196 GST_C_5 GST_C family, 99.6 2.6E-14 5.6E-19 120.5 10.6 114 86-203 2-115 (115)
29 PF02798 GST_N: Glutathione S- 99.5 1.3E-14 2.8E-19 113.2 7.1 73 1-76 1-76 (76)
30 cd03045 GST_N_Delta_Epsilon GS 99.5 3.4E-14 7.4E-19 109.7 8.7 73 3-76 1-74 (74)
31 cd03182 GST_C_GTT2_like GST_C 99.5 1E-13 2.2E-18 116.4 11.5 111 87-199 1-117 (117)
32 cd03048 GST_N_Ure2p_like GST_N 99.5 5.6E-14 1.2E-18 110.7 9.1 75 3-79 2-80 (81)
33 cd03188 GST_C_Beta GST_C famil 99.5 7.7E-14 1.7E-18 116.3 10.1 111 90-203 2-114 (114)
34 cd03052 GST_N_GDAP1 GST_N fami 99.5 6.1E-14 1.3E-18 108.5 8.5 72 3-75 1-73 (73)
35 cd03059 GST_N_SspA GST_N famil 99.5 9.1E-14 2E-18 106.9 8.9 72 3-77 1-72 (73)
36 PF13417 GST_N_3: Glutathione 99.5 6.3E-14 1.4E-18 108.9 8.0 74 5-81 1-74 (75)
37 cd03178 GST_C_Ure2p_like GST_C 99.5 5.9E-14 1.3E-18 117.2 8.2 112 90-203 1-112 (113)
38 cd03189 GST_C_GTT1_like GST_C 99.5 2.1E-13 4.6E-18 114.9 11.2 110 85-197 2-119 (119)
39 cd03060 GST_N_Omega_like GST_N 99.5 1.5E-13 3.3E-18 105.5 8.5 68 4-74 2-70 (71)
40 cd03050 GST_N_Theta GST_N fami 99.5 1.8E-13 3.8E-18 106.5 9.0 74 3-77 1-75 (76)
41 cd03053 GST_N_Phi GST_N family 99.5 1.8E-13 4E-18 106.2 9.0 73 3-76 2-75 (76)
42 cd03041 GST_N_2GST_N GST_N fam 99.5 1.2E-13 2.6E-18 107.9 7.8 73 3-77 2-76 (77)
43 cd03057 GST_N_Beta GST_N famil 99.5 1.8E-13 4E-18 106.6 8.7 75 3-79 1-77 (77)
44 cd03187 GST_C_Phi GST_C family 99.5 3.5E-13 7.7E-18 113.1 11.0 112 90-203 2-118 (118)
45 cd03047 GST_N_2 GST_N family, 99.5 2.1E-13 4.6E-18 105.2 8.5 72 3-75 1-73 (73)
46 cd03056 GST_N_4 GST_N family, 99.5 2.3E-13 4.9E-18 104.5 8.6 72 3-75 1-73 (73)
47 cd03051 GST_N_GTT2_like GST_N 99.5 2.5E-13 5.4E-18 104.4 8.3 72 3-75 1-74 (74)
48 cd03185 GST_C_Tau GST_C family 99.5 5.5E-13 1.2E-17 113.4 10.8 111 89-206 2-116 (126)
49 cd03046 GST_N_GTT1_like GST_N 99.4 3.7E-13 8E-18 104.3 8.8 75 3-79 1-76 (76)
50 cd03076 GST_N_Pi GST_N family, 99.4 1.9E-13 4E-18 105.7 7.0 72 2-76 1-72 (73)
51 cd03186 GST_C_SspA GST_N famil 99.4 7.4E-13 1.6E-17 109.6 11.1 105 89-202 2-106 (107)
52 cd03058 GST_N_Tau GST_N family 99.4 4.5E-13 9.8E-18 103.6 8.8 72 3-77 1-73 (74)
53 cd03180 GST_C_2 GST_C family, 99.4 9.2E-13 2E-17 109.1 10.7 107 90-199 2-110 (110)
54 cd03049 GST_N_3 GST_N family, 99.4 4.8E-13 1E-17 103.1 8.2 70 3-75 1-73 (73)
55 cd03039 GST_N_Sigma_like GST_N 99.4 2.5E-13 5.4E-18 104.5 6.5 72 3-76 1-72 (72)
56 cd03055 GST_N_Omega GST_N fami 99.4 5.5E-13 1.2E-17 107.2 8.7 72 1-75 17-89 (89)
57 cd03042 GST_N_Zeta GST_N famil 99.4 5.7E-13 1.2E-17 102.3 8.4 72 3-75 1-73 (73)
58 cd03191 GST_C_Zeta GST_C famil 99.4 6.9E-13 1.5E-17 112.3 9.6 114 89-205 2-119 (121)
59 cd03177 GST_C_Delta_Epsilon GS 99.4 7.8E-13 1.7E-17 111.6 8.9 108 90-203 2-110 (118)
60 cd03190 GST_C_ECM4_like GST_C 99.4 1.7E-12 3.6E-17 113.6 11.0 112 89-206 3-119 (142)
61 cd03037 GST_N_GRX2 GST_N famil 99.4 1.2E-12 2.7E-17 100.3 7.7 70 3-76 1-71 (71)
62 COG0435 ECM4 Predicted glutath 99.4 2.5E-12 5.5E-17 120.1 10.5 192 3-203 52-284 (324)
63 cd03061 GST_N_CLIC GST_N famil 99.4 1.9E-12 4.2E-17 103.9 8.4 69 9-80 20-88 (91)
64 cd03183 GST_C_Theta GST_C fami 99.4 4.5E-12 9.8E-17 108.0 10.4 114 91-206 2-123 (126)
65 cd03200 GST_C_JTV1 GST_C famil 99.4 2.6E-12 5.6E-17 104.8 8.2 96 71-196 1-96 (96)
66 cd03206 GST_C_7 GST_C family, 99.3 2.1E-12 4.6E-17 105.7 6.6 100 94-199 1-100 (100)
67 PF13409 GST_N_2: Glutathione 99.3 2.9E-12 6.3E-17 98.2 6.8 66 10-76 1-69 (70)
68 cd03207 GST_C_8 GST_C family, 99.3 2.7E-12 5.9E-17 105.5 7.1 100 95-204 2-101 (103)
69 KOG4244 Failed axon connection 99.3 1.9E-11 4.2E-16 113.9 12.8 173 10-195 60-272 (281)
70 cd03075 GST_N_Mu GST_N family, 99.3 5.6E-12 1.2E-16 99.7 8.0 73 4-77 2-81 (82)
71 cd03077 GST_N_Alpha GST_N fami 99.3 9.4E-12 2E-16 97.7 8.1 71 3-79 2-77 (79)
72 cd03179 GST_C_1 GST_C family, 99.3 1.1E-11 2.3E-16 101.9 8.6 102 90-194 2-105 (105)
73 cd03043 GST_N_1 GST_N family, 99.3 1.5E-11 3.2E-16 95.1 7.9 67 8-75 7-73 (73)
74 cd03038 GST_N_etherase_LigE GS 99.3 1.5E-11 3.3E-16 97.5 7.7 69 9-79 14-84 (84)
75 cd03184 GST_C_Omega GST_C fami 99.3 2.7E-11 5.8E-16 103.3 9.2 109 90-207 2-115 (124)
76 KOG3029 Glutathione S-transfer 99.2 6.5E-11 1.4E-15 110.7 12.1 187 3-195 91-354 (370)
77 cd03209 GST_C_Mu GST_C family, 99.2 7.9E-11 1.7E-15 99.9 11.4 113 90-210 2-114 (121)
78 cd00570 GST_N_family Glutathio 99.2 3.4E-11 7.4E-16 90.3 8.2 71 3-75 1-71 (71)
79 cd03040 GST_N_mPGES2 GST_N fam 99.2 4.2E-11 9.2E-16 93.2 8.3 70 3-77 2-75 (77)
80 COG2999 GrxB Glutaredoxin 2 [P 99.2 1.4E-10 3E-15 101.9 12.2 186 3-200 1-208 (215)
81 cd03080 GST_N_Metaxin_like GST 99.2 4.1E-11 9E-16 93.0 8.1 66 3-78 2-74 (75)
82 cd03203 GST_C_Lambda GST_C fam 99.2 6.1E-11 1.3E-15 100.6 9.0 106 87-206 1-112 (120)
83 cd03204 GST_C_GDAP1 GST_C fami 99.2 7E-11 1.5E-15 98.7 8.6 79 121-199 21-111 (111)
84 PF00043 GST_C: Glutathione S- 99.2 8E-11 1.7E-15 95.0 8.5 74 123-197 22-95 (95)
85 cd03210 GST_C_Pi GST_C family, 99.2 2.8E-10 6.1E-15 97.3 12.2 118 90-217 3-123 (126)
86 cd03195 GST_C_4 GST_C family, 99.2 1.3E-10 2.9E-15 97.6 9.5 109 89-204 2-112 (114)
87 KOG2903 Predicted glutathione 99.2 9.5E-11 2.1E-15 108.6 8.9 192 3-203 38-286 (319)
88 cd03198 GST_C_CLIC GST_C famil 99.1 2.3E-10 5E-15 98.6 9.8 84 123-206 23-125 (134)
89 PF13410 GST_C_2: Glutathione 99.1 1.6E-10 3.4E-15 87.9 7.5 68 125-192 2-69 (69)
90 cd00299 GST_C_family Glutathio 99.1 2E-10 4.4E-15 92.5 8.3 99 95-193 2-100 (100)
91 PF14497 GST_C_3: Glutathione 99.1 7.8E-11 1.7E-15 96.3 5.3 95 88-195 3-99 (99)
92 cd03208 GST_C_Alpha GST_C fami 99.1 1.1E-09 2.5E-14 95.1 10.6 111 90-207 3-117 (137)
93 cd03054 GST_N_Metaxin GST_N fa 99.0 9.4E-10 2E-14 84.5 7.8 63 4-76 2-71 (72)
94 cd03201 GST_C_DHAR GST_C famil 99.0 1.6E-09 3.4E-14 92.2 8.6 79 128-206 29-111 (121)
95 cd03192 GST_C_Sigma_like GST_C 99.0 1.6E-09 3.4E-14 89.0 7.4 100 90-193 2-104 (104)
96 cd03194 GST_C_3 GST_C family, 98.9 5.7E-09 1.2E-13 87.8 10.2 104 95-204 4-113 (114)
97 cd03205 GST_C_6 GST_C family, 98.9 3.9E-09 8.5E-14 86.0 8.1 96 95-193 2-98 (98)
98 KOG3027 Mitochondrial outer me 98.9 3.3E-08 7.1E-13 89.0 12.8 177 9-196 32-248 (257)
99 cd03193 GST_C_Metaxin GST_C fa 98.8 1.6E-08 3.6E-13 80.6 7.9 66 129-194 19-88 (88)
100 KOG3028 Translocase of outer m 98.8 4.8E-07 1E-11 86.8 18.1 175 10-195 16-233 (313)
101 cd03079 GST_N_Metaxin2 GST_N f 98.7 3E-08 6.5E-13 76.6 7.1 59 9-76 15-73 (74)
102 cd03202 GST_C_etherase_LigE GS 98.7 5.3E-08 1.1E-12 83.1 8.0 68 127-195 56-123 (124)
103 cd03212 GST_C_Metaxin1_3 GST_C 98.4 5E-07 1.1E-11 78.5 7.2 72 124-195 59-134 (137)
104 KOG1147 Glutamyl-tRNA syntheta 98.4 5.5E-07 1.2E-11 91.5 6.9 162 1-206 1-165 (712)
105 cd03211 GST_C_Metaxin2 GST_C f 98.4 5.6E-07 1.2E-11 77.1 5.7 70 124-193 52-125 (126)
106 cd03197 GST_C_mPGES2 GST_C fam 98.3 1.6E-06 3.5E-11 75.7 6.9 67 128-195 78-145 (149)
107 PF14834 GST_C_4: Glutathione 98.2 1.2E-05 2.5E-10 66.6 10.1 112 87-204 1-113 (117)
108 TIGR02190 GlrX-dom Glutaredoxi 98.2 7E-06 1.5E-10 64.2 7.5 72 1-75 8-79 (79)
109 cd03078 GST_N_Metaxin1_like GS 98.1 9.9E-06 2.1E-10 62.5 7.6 57 10-76 15-71 (73)
110 PRK10638 glutaredoxin 3; Provi 98.0 2.1E-05 4.6E-10 62.0 7.3 74 1-76 1-75 (83)
111 cd03029 GRX_hybridPRX5 Glutare 97.8 0.00012 2.5E-09 56.0 7.9 71 2-75 2-72 (72)
112 PRK10329 glutaredoxin-like pro 97.6 0.00017 3.6E-09 56.8 6.4 59 1-62 1-59 (81)
113 cd03027 GRX_DEP Glutaredoxin ( 97.5 0.0003 6.5E-09 53.9 6.6 66 3-70 3-68 (73)
114 TIGR02196 GlrX_YruB Glutaredox 97.5 0.00032 6.9E-09 52.8 6.7 70 3-74 2-73 (74)
115 cd02066 GRX_family Glutaredoxi 97.5 0.00034 7.4E-09 52.3 6.8 70 2-73 1-70 (72)
116 cd02976 NrdH NrdH-redoxin (Nrd 97.5 0.00028 6.1E-09 53.0 5.7 62 3-66 2-63 (73)
117 cd03418 GRX_GRXb_1_3_like Glut 97.2 0.0013 2.7E-08 50.3 6.8 71 3-75 2-73 (75)
118 TIGR02200 GlrX_actino Glutared 97.2 0.0013 2.9E-08 50.2 6.8 64 3-68 2-67 (77)
119 COG0695 GrxC Glutaredoxin and 97.2 0.0015 3.2E-08 51.3 6.8 64 1-65 1-65 (80)
120 TIGR02194 GlrX_NrdH Glutaredox 97.0 0.0017 3.8E-08 49.5 6.0 57 3-62 1-57 (72)
121 PRK11200 grxA glutaredoxin 1; 96.9 0.0042 9E-08 49.0 7.4 75 1-77 1-82 (85)
122 TIGR02181 GRX_bact Glutaredoxi 96.9 0.0029 6.3E-08 49.0 6.4 72 3-76 1-72 (79)
123 PF10568 Tom37: Outer mitochon 96.5 0.01 2.2E-07 45.6 6.7 55 10-74 13-71 (72)
124 TIGR02183 GRXA Glutaredoxin, G 95.9 0.042 9E-07 43.5 7.6 73 3-77 2-81 (86)
125 PF00462 Glutaredoxin: Glutare 95.8 0.011 2.4E-07 43.2 3.6 57 3-61 1-57 (60)
126 PF04399 Glutaredoxin2_C: Glut 95.6 0.031 6.6E-07 48.1 6.1 68 127-199 57-124 (132)
127 TIGR02189 GlrX-like_plant Glut 95.5 0.071 1.5E-06 43.5 7.7 72 2-74 9-82 (99)
128 cd03419 GRX_GRXh_1_2_like Glut 95.5 0.077 1.7E-06 40.9 7.6 73 3-76 2-76 (82)
129 TIGR02180 GRX_euk Glutaredoxin 94.8 0.16 3.5E-06 39.1 7.5 71 3-76 1-77 (84)
130 KOG1668 Elongation factor 1 be 94.3 0.043 9.2E-07 51.1 3.7 60 135-201 10-69 (231)
131 cd03199 GST_C_GRX2 GST_C famil 94.3 0.14 3E-06 43.8 6.3 67 128-199 59-125 (128)
132 PHA03050 glutaredoxin; Provisi 94.1 0.27 5.9E-06 40.8 7.7 69 3-72 15-88 (108)
133 cd03028 GRX_PICOT_like Glutare 93.1 0.45 9.7E-06 37.9 7.2 70 3-74 10-84 (90)
134 TIGR00365 monothiol glutaredox 93.0 0.43 9.3E-06 38.7 7.0 70 3-74 14-88 (97)
135 COG1393 ArsC Arsenate reductas 92.5 0.19 4.1E-06 42.4 4.3 33 1-34 1-33 (117)
136 COG4545 Glutaredoxin-related p 92.3 0.47 1E-05 36.4 5.7 64 1-65 1-77 (85)
137 PRK12759 bifunctional gluaredo 91.3 0.7 1.5E-05 47.6 7.8 69 1-72 1-79 (410)
138 cd03032 ArsC_Spx Arsenate Redu 91.0 0.37 8E-06 40.3 4.6 31 3-34 2-32 (115)
139 PRK01655 spxA transcriptional 90.7 0.37 8E-06 41.4 4.4 33 2-35 1-33 (131)
140 cd03031 GRX_GRX_like Glutaredo 89.9 1.2 2.6E-05 39.1 7.0 70 3-74 2-81 (147)
141 PRK10026 arsenate reductase; P 89.4 0.57 1.2E-05 40.8 4.5 33 1-34 1-34 (141)
142 PRK13344 spxA transcriptional 89.4 0.58 1.2E-05 40.3 4.5 33 2-35 1-33 (132)
143 PF09635 MetRS-N: MetRS-N bind 88.4 0.57 1.2E-05 39.5 3.7 46 15-76 13-60 (122)
144 cd03036 ArsC_like Arsenate Red 87.9 0.75 1.6E-05 38.2 4.1 32 3-35 1-32 (111)
145 PRK10853 putative reductase; P 87.9 0.76 1.6E-05 38.7 4.2 32 2-34 1-32 (118)
146 PRK12559 transcriptional regul 87.9 0.87 1.9E-05 39.1 4.6 32 3-35 2-33 (131)
147 cd02973 TRX_GRX_like Thioredox 87.7 2.1 4.6E-05 31.4 6.1 56 3-64 3-63 (67)
148 cd02977 ArsC_family Arsenate R 87.2 0.88 1.9E-05 37.2 4.1 32 3-35 1-32 (105)
149 TIGR01617 arsC_related transcr 84.9 1.4 3E-05 36.9 4.2 31 3-34 1-31 (117)
150 cd03033 ArsC_15kD Arsenate Red 83.8 1.7 3.7E-05 36.3 4.3 31 3-34 2-32 (113)
151 cd03035 ArsC_Yffb Arsenate Red 83.4 1.8 3.9E-05 35.6 4.3 32 3-35 1-32 (105)
152 PF05768 DUF836: Glutaredoxin- 83.1 4.8 0.0001 31.2 6.4 54 3-61 2-57 (81)
153 TIGR01616 nitro_assoc nitrogen 79.7 2.9 6.2E-05 35.7 4.3 31 3-34 3-33 (126)
154 TIGR00014 arsC arsenate reduct 78.7 3.2 6.9E-05 34.6 4.2 31 3-34 1-31 (114)
155 cd03034 ArsC_ArsC Arsenate Red 78.6 3.2 7E-05 34.4 4.2 31 3-34 1-31 (112)
156 cd01659 TRX_superfamily Thiore 78.2 6.3 0.00014 26.8 5.2 55 4-61 2-61 (69)
157 TIGR00412 redox_disulf_2 small 76.5 13 0.00028 28.3 6.8 56 1-64 1-60 (76)
158 PRK10824 glutaredoxin-4; Provi 76.4 11 0.00023 31.7 6.7 70 3-74 17-91 (115)
159 PF11801 Tom37_C: Tom37 C-term 74.0 6.8 0.00015 35.1 5.3 38 134-171 113-154 (168)
160 TIGR00411 redox_disulf_1 small 69.7 21 0.00046 26.8 6.6 55 3-61 3-61 (82)
161 PTZ00062 glutaredoxin; Provisi 67.2 21 0.00045 33.1 7.0 68 3-72 115-187 (204)
162 PF13192 Thioredoxin_3: Thiore 65.3 26 0.00056 26.6 6.2 58 1-66 1-63 (76)
163 cd03030 GRX_SH3BGR Glutaredoxi 63.2 37 0.0008 27.2 6.9 67 3-71 2-78 (92)
164 PF04908 SH3BGR: SH3-binding, 61.2 12 0.00027 30.4 3.8 35 1-36 1-41 (99)
165 PHA02125 thioredoxin-like prot 57.4 28 0.0006 26.3 5.1 51 3-59 2-52 (75)
166 cd03026 AhpF_NTD_C TRX-GRX-lik 56.5 38 0.00082 26.7 5.9 54 3-62 16-74 (89)
167 KOG1752 Glutaredoxin and relat 56.4 77 0.0017 26.0 7.8 71 3-76 16-90 (104)
168 PF09868 DUF2095: Uncharacteri 56.2 6.3 0.00014 32.8 1.3 27 261-287 2-28 (128)
169 PF03960 ArsC: ArsC family; I 50.6 20 0.00043 29.4 3.5 28 6-34 1-28 (110)
170 PF11287 DUF3088: Protein of u 50.5 16 0.00035 30.3 2.9 64 11-79 24-108 (112)
171 KOG0867 Glutathione S-transfer 44.3 3.4 7.3E-05 38.8 -2.3 78 129-210 91-169 (226)
172 PF11417 Inhibitor_G39P: Loade 42.1 93 0.002 23.7 5.7 63 66-162 5-69 (71)
173 PF11280 DUF3081: Protein of u 35.8 48 0.0011 25.8 3.3 35 302-340 34-78 (79)
174 PF09679 TraQ: Type-F conjugat 29.1 16 0.00036 28.6 -0.2 19 340-365 1-19 (93)
175 TIGR02741 TraQ type-F conjugat 24.9 23 0.0005 26.9 -0.1 19 340-365 1-19 (80)
176 PRK15317 alkyl hydroperoxide r 24.5 60 0.0013 34.3 2.9 57 3-65 120-181 (517)
177 cd02978 KaiB_like KaiB-like fa 23.5 1.8E+02 0.0038 22.3 4.5 52 3-58 4-60 (72)
178 TIGR03143 AhpF_homolog putativ 23.2 1.8E+02 0.0038 31.2 6.2 54 3-62 480-538 (555)
179 TIGR03140 AhpF alkyl hydropero 21.5 74 0.0016 33.7 2.8 58 3-66 121-183 (515)
No 1
>KOG1627 consensus Translation elongation factor EF-1 gamma [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-77 Score=502.35 Aligned_cols=156 Identities=51% Similarity=0.949 Sum_probs=151.6
Q ss_pred CCCCCCCCCCCchhhHhhhhcCCCccchhhhhhhhhhccCCCCcEEEEEeeccCCCccceeecchhhhHHHHhhhhhhhh
Q 014592 264 NPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKY 343 (422)
Q Consensus 264 ~pl~~lp~~~f~ld~~kr~ysn~~~~~~~~~~~~fw~~~d~~~~s~w~~~yky~~e~~~~fm~~nli~gf~qr~~~~~k~ 343 (422)
|||++||+|+|+||||||+|||+|| +.+||||||+||||||||||+|+||||+||+++||||||||||||||+++|||
T Consensus 1 ~pl~~lp~~~Fvldd~kr~ySn~dt--~~~a~P~f~e~~d~e~ys~w~~~Yky~eeL~~~fms~nli~g~~qrl~~~rk~ 78 (160)
T KOG1627|consen 1 DPLDLLPKSTFVLDDWKRKYSNEDT--REVALPWFWEHFDPEGYSLWKVDYKYNEELTLTFMSCNLIGGFFQRLDKSRKY 78 (160)
T ss_pred CchhhCCCCccchhhhhhhhccccc--ccccchHHHHHhCcccceeeeccccCchHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 7999999999999999999999999 78999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeecCCCceeEEEEEEeCCCCCcccc--ccCCCcCceeeEecCCCCHHHHHHHHHHhccCCCCC--Cccccccc
Q 014592 344 AFGKMLIIGSEPPFKVKGLWLFRGQEIPQFIM--DECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAK 419 (422)
Q Consensus 344 ~f~~~~v~g~~~~~~i~g~~~~rg~~~~~~~~--~~~~d~e~y~~~kld~~~~~~k~~~~~~~~~~~~~~--g~~~~~~k 419 (422)
+||||+|+|+|++++|+|+|+|||||+.+ .| |++||||||+||||||+++|+|++|++||+|+++++ ||.++|||
T Consensus 79 ~f~~~~~~g~~~~~~i~g~~~~rg~ela~-~~spDwq~D~EsY~~tKLD~~see~k~~V~ey~sWeg~f~~~Gkaf~qgK 157 (160)
T KOG1627|consen 79 AFGSMVLFGENGNSTISGAWVFRGQELAP-AFSPDWQPDYESYTWTKLDPGSEETKELVNEYFSWEGPFEGNGKAFNDGK 157 (160)
T ss_pred hheeEEEeccCCCCcceEEEEEecccccc-ccCccccccccceeeeecCCCCHHHHHHHHHHHhhcccccccchhhhccc
Confidence 99999999999999999999999999755 77 999999999999999999999999999999999755 69999999
Q ss_pred ccC
Q 014592 420 CFK 422 (422)
Q Consensus 420 ~~k 422 (422)
|||
T Consensus 158 i~K 160 (160)
T KOG1627|consen 158 IFK 160 (160)
T ss_pred ccC
Confidence 998
No 2
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=100.00 E-value=6.2e-65 Score=412.68 Aligned_cols=107 Identities=63% Similarity=1.212 Sum_probs=83.5
Q ss_pred CCCCCCCCCCCCCCchhhHhhhhcCCCccchhhhhhhhhhccCCCCcEEEEEeeccCCCccceeecchhhhHHHHhhhhh
Q 014592 261 KPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLA 340 (422)
Q Consensus 261 K~k~pl~~lp~~~f~ld~~kr~ysn~~~~~~~~~~~~fw~~~d~~~~s~w~~~yky~~e~~~~fm~~nli~gf~qr~~~~ 340 (422)
|+|||||+||||+|+||+|||+|||+|| +++||||||||||+||||||+|+||||+|||++|||||||||||||||++
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~--~~~a~p~Fwe~~d~eg~Slw~~~Yky~~El~~~fmt~Nli~Gf~QRle~~ 78 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDT--RTVAMPWFWENFDPEGYSLWFCDYKYNDELTMTFMTCNLIGGFFQRLEKL 78 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-G--GGTHHHHHHSS--TTT-EEEEE--S-GGG---STTHHHHHHHHHHHGGGT
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCc--hhhHHHHHHHhCCccccEEEEEecCChhhhccceeehhHHHHHHHHHHHH
Confidence 6899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred hhhcceeEEEeecCCCceeEEEEEEeCCC
Q 014592 341 RKYAFGKMLIIGSEPPFKVKGLWLFRGQE 369 (422)
Q Consensus 341 ~k~~f~~~~v~g~~~~~~i~g~~~~rg~~ 369 (422)
||||||+|+|||+++++.|+|||||||||
T Consensus 79 rK~aFg~~~v~G~~~~~~I~Gvwv~rG~e 107 (107)
T PF00647_consen 79 RKYAFGSMSVFGEDNNSDISGVWVFRGQE 107 (107)
T ss_dssp GGGEEE--EEES-STT-EEEEEEEESSSS
T ss_pred hhhheeEEEEEecCCCCceEEEEEEecCC
Confidence 99999999999999999999999999997
No 3
>PLN02473 glutathione S-transferase
Probab=99.98 E-value=5.3e-31 Score=245.80 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=167.1
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccC
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~ 79 (422)
|.+|||+.+.|+++++|++++.++|++|+.+ .++.. .++..++++++||.|+||+|++++.+|+||.||++||++.++
T Consensus 1 ~~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~-~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~ 79 (214)
T PLN02473 1 MVVKVYGQIKAANPQRVLLCFLEKGIEFEVI-HVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYA 79 (214)
T ss_pred CceEEecCCCCCchHHHHHHHHHcCCCceEE-EecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcC
Confidence 7899999999999999999999999999997 67653 356789999999999999999866699999999999999986
Q ss_pred CC--CCCCCCHHHHHHHHHHHHHHhccchhhHHh-----hhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccc
Q 014592 80 DN--PLLGSSLIDSAHIEQWIDFSSLEIDTNILR-----WFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLV 152 (422)
Q Consensus 80 ~~--~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLv 152 (422)
.. .|+|.++.+++++++|+.+..+.+.+.... .+.+.. ..+.+....+.....+.+.|+.||++|++++||+
T Consensus 80 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 158 (214)
T PLN02473 80 DQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRL-GEPCDVALVEELKVKFDKVLDVYENRLATNRYLG 158 (214)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 43 699999999999999999998766543321 111111 1334456667778889999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhc
Q 014592 153 GHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (422)
Q Consensus 153 Ge~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~ 205 (422)
|+++|+|||++++.+.++........+.+.||+|.+|+++|.++|.|++++..
T Consensus 159 Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 159 GDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 99999999999999876543222223467899999999999999999998865
No 4
>PLN02395 glutathione S-transferase
Probab=99.97 E-value=1.7e-30 Score=242.37 Aligned_cols=205 Identities=25% Similarity=0.380 Sum_probs=166.5
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccC-CCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccC
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEM-GVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~-~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~ 79 (422)
|++|||+.+. +++++|++++.++|++|+.+ .++. .+++.+++|++.||.|+||+|++++.+|+||.||++||+++++
T Consensus 1 ~~~~ly~~~~-~~~~rv~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~ 78 (215)
T PLN02395 1 MVLKVYGPAF-ASPKRALVTLIEKGVEFETV-PVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYR 78 (215)
T ss_pred CeEEEEcCCc-CcHHHHHHHHHHcCCCceEE-EeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcC
Confidence 8999999655 57999999999999999986 6654 2356788999999999999999877799999999999999987
Q ss_pred C--CCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcc-----cccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccc
Q 014592 80 D--NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIP-----RVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLV 152 (422)
Q Consensus 80 ~--~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLv 152 (422)
. +.|+|.++.+++++++|+++++..+.+.+...+.. ..+ .+.+....+...+.+.+.++.||++|++++||+
T Consensus 79 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 157 (215)
T PLN02395 79 SQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMG-FPADEKVIKESEEKLAKVLDVYEARLSKSKYLA 157 (215)
T ss_pred CCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 5 36999999999999999999987776654332211 111 233455667788889999999999999899999
Q ss_pred cCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcccc
Q 014592 153 GHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQ 208 (422)
Q Consensus 153 Ge~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~ 208 (422)
|+++|+|||++++++.++.........+..+|+|.+|+++|.++|.+++++....+
T Consensus 158 G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~~ 213 (215)
T PLN02395 158 GDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYSL 213 (215)
T ss_pred CCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhcC
Confidence 99999999999988776532211222367899999999999999999999987654
No 5
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.97 E-value=2.6e-30 Score=241.02 Aligned_cols=192 Identities=18% Similarity=0.206 Sum_probs=161.3
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNP 82 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~ 82 (422)
+|||+++.||+|++|+++|+++|++|+.+ .++. .+++++|+++||.|+||+|++++.+|+||.||++||+++++...
T Consensus 11 ~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~-~v~~--~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~ 87 (211)
T PRK09481 11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIE-QVEK--DNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPP 87 (211)
T ss_pred eEEeCCCCChhHHHHHHHHHHCCCCCEEE-eCCc--ccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCC
Confidence 69999999999999999999999999997 7765 46778999999999999999866699999999999999998888
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHH
Q 014592 83 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADII 162 (422)
Q Consensus 83 L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~ 162 (422)
|+|.++.+++++++|+.++.+.+........ ..++...+.....+...|..||++|.+++||+|+++|+|||+
T Consensus 88 l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~ 160 (211)
T PRK09481 88 LMPVYPVARGESRLMMHRIEKDWYSLMNKIV-------NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCY 160 (211)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHH
Confidence 9999999999999999988765433322111 113455677788899999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhc
Q 014592 163 MTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (422)
Q Consensus 163 l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~ 205 (422)
+++.+.++....++. ....||+|.+|+++|.++|.|++++.+
T Consensus 161 l~~~~~~~~~~~~~~-~~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 161 LAPLLWRLPVLGIEL-SGPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHhcCCCC-CCCCChhHHHHHHHHhccHHHHHHcCH
Confidence 999987654433321 125799999999999999999988764
No 6
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.97 E-value=4e-30 Score=240.32 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=159.2
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcC----Ce---eeecHHHHHHHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETP----DG---PIFESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~----dg---~l~ES~AIa~YL 74 (422)
+|||+.+ ++++++|+++|+++|++|+.+ .+++. +++..++|+++||.|+||+|+++ +| +|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLI-KVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEE-EecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7999887 799999999999999999997 77653 34567899999999999999972 44 699999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccC
Q 014592 75 ARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGH 154 (422)
Q Consensus 75 ~~~~~~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe 154 (422)
++.++ .+.|.++.+++++++|+.|+.+.+.+.......-.......++...+.....+.+.|..||++|.+++||+|+
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 157 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGE 157 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence 99864 4778889999999999999987776543221100001111234556667788999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhccccc
Q 014592 155 SVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQA 209 (422)
Q Consensus 155 ~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~ 209 (422)
++|+|||++++.+........+ ...||+|.+|+++|.++|+|++++....+.
T Consensus 158 ~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~~~~~~~ 209 (215)
T PRK13972 158 NYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQALLKAQLG 209 (215)
T ss_pred CCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHHHHhccc
Confidence 9999999998877544333222 578999999999999999999988776554
No 7
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.5e-29 Score=236.84 Aligned_cols=205 Identities=29% Similarity=0.421 Sum_probs=180.7
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEecc-CCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccC
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFE-MGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~-~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~ 79 (422)
|.++||+.+.|+++++++++++++|++++.+ .++ +.+++.+++|+++||.|+||+|++++-+|+||.||++||++.+.
T Consensus 1 ~~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~-~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~ 79 (226)
T KOG0867|consen 1 MKLKLYGHLGSPPARAVLIAAKELGLEVELK-PVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYG 79 (226)
T ss_pred CCceEeecCCCcchHHHHHHHHHcCCceeEE-EeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC
Confidence 7899999999999999999999999999997 444 45789999999999999999999984499999999999999885
Q ss_pred -CCC-CCCCCHHHHHHHHHHHHHHhccchhh--HHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCC
Q 014592 80 -DNP-LLGSSLIDSAHIEQWIDFSSLEIDTN--ILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHS 155 (422)
Q Consensus 80 -~~~-L~g~~~~e~a~v~~wl~~~~~~l~~~--~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~ 155 (422)
..+ |+|.+..++|.|++|+.+.++.+.+. ...++.+.....+.+....+.....+..++..+|++|.++.||+|++
T Consensus 80 ~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~ 159 (226)
T KOG0867|consen 80 PLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQ 159 (226)
T ss_pred CCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCc
Confidence 334 99999999999999999999999888 45677775666777899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 156 iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
+|+||+.+++.+..+.....+.....++|++.||++++.++|.+++.....
T Consensus 160 ~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~ 210 (226)
T KOG0867|consen 160 LTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANEKG 210 (226)
T ss_pred ccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHHHH
Confidence 999999999999887422223455889999999999999999988766543
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.97 E-value=3.8e-29 Score=231.24 Aligned_cols=198 Identities=22% Similarity=0.246 Sum_probs=159.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~ 81 (422)
++||+++.||++++|+++|+++|++|+.+ .++. ....+++.+.||.|+||+|++++| +|+||.||++||++.++..
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~-~~~~--~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFV-NELP--YNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEE-ecCC--CCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 48999999999999999999999999986 6553 334567788899999999997777 9999999999999988777
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHH
Q 014592 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADI 161 (422)
Q Consensus 82 ~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI 161 (422)
.|+|.++.+++++++|+.++++.+......................+.....+.+.|+.||++|.+++ |+|+++|+|||
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi 156 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATI 156 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHH
Confidence 89999999999999999888765544432222111111122344556777889999999999999888 99999999999
Q ss_pred HHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhh
Q 014592 162 IMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (422)
Q Consensus 162 ~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~ 204 (422)
++++.+.++.....+..+...||+|.+|+++|.++|.|+++..
T Consensus 157 ~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 157 AIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 9999998764433333445689999999999999999998664
No 9
>PRK15113 glutathione S-transferase; Provisional
Probab=99.97 E-value=4.3e-29 Score=233.30 Aligned_cols=198 Identities=17% Similarity=0.118 Sum_probs=158.3
Q ss_pred eEEEecC--CCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccC
Q 014592 3 LVLHAGN--TNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (422)
Q Consensus 3 ~tLy~~~--~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~ 79 (422)
++||+.+ .|+++++|+++|.++|++|+.+ .++.. +++..++|++.||.|+||+|++++.+|+||.||++||++.++
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~-~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~ 84 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELK-TVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFA 84 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEE-EeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcC
Confidence 5999975 6999999999999999999997 77653 345679999999999999999876699999999999999998
Q ss_pred CCC---CCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCccccCC
Q 014592 80 DNP---LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHS 155 (422)
Q Consensus 80 ~~~---L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~ 155 (422)
... |+|.++.+++++++|+.++.+++.+...............+....+...+.+.+.+..||++|++ ..||+|+
T Consensus 85 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~- 163 (214)
T PRK15113 85 PPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE- 163 (214)
T ss_pred CCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-
Confidence 665 99999999999999999998776543211110101111123344566778899999999999975 4799996
Q ss_pred CCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 156 iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
+|+|||++++.+.++..... .+ .|+|.+|+++|.++|+|++++...+
T Consensus 164 ~TlADi~l~~~l~~~~~~~~--~~---~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 164 WCIADTDLALMLNRLVLHGD--EV---PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred ccHHHHHHHHHHHHHHHcCC--CC---CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 99999999999986644322 21 2999999999999999999987653
No 10
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=3.7e-29 Score=230.88 Aligned_cols=194 Identities=22% Similarity=0.371 Sum_probs=158.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCC--CCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV--TNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~--~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~ 79 (422)
++||+.+.+ ++++++++|+++|++|+.+ .+++.. ....++|++.||.|+||+|++++| +|+||.||++||++.++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~-~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLV-SVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEE-EeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 489998765 7999999999999999986 666532 235689999999999999998788 99999999999999988
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCH
Q 014592 80 DNPLL-GSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTL 158 (422)
Q Consensus 80 ~~~L~-g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTl 158 (422)
+..++ |.++.+++++++|+.++.+.+.+.+...+.+ .......+...+.+.+.|+.||++|.+++||+|+++|+
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ 153 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRP-----DTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTI 153 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCC-----CChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcH
Confidence 77766 5678899999999999988776554333221 11233345667789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 159 ADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 159 ADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
|||++++.+.++.....+ ...||+|.+|+++|.++|.|++++...
T Consensus 154 ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~~ 198 (201)
T PRK10542 154 ADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKAE 198 (201)
T ss_pred HhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHHc
Confidence 999999998876443332 467999999999999999999998653
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.6e-28 Score=228.76 Aligned_cols=194 Identities=29% Similarity=0.404 Sum_probs=167.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~ 81 (422)
++||+.+.||++++|++++.++|++|+.+ .++...+...++|+++||+|+||+|+++|| +|+||.||++||+++++..
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~-~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIV-LVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEE-EeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 48999999999999999999999999997 777644567899999999999999999999 8999999999999999876
Q ss_pred CCCCCCHH---HHHHHHHHHHHHhccchhhHHhhhcccccccCC-CHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCC
Q 014592 82 PLLGSSLI---DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY-LPQAEEAAIASLKRALAALNTHLASNTYLVGHSVT 157 (422)
Q Consensus 82 ~L~g~~~~---e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iT 157 (422)
.|+|.++. +++++.+|+.++...+.+.+........+.... +....+...+.+...+..+|.+|..++||+|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 69998884 889999999999999988887665554222222 46778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhH
Q 014592 158 LADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFR 200 (422)
Q Consensus 158 lADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k 200 (422)
+|||++++.+.++.....+ ...+|+|.+|++++.++|.++
T Consensus 160 iAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 9999999999875443322 278999999999999999965
No 12
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.96 E-value=1.1e-28 Score=229.27 Aligned_cols=197 Identities=22% Similarity=0.313 Sum_probs=158.6
Q ss_pred EEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC--CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCC
Q 014592 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG--VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADN 81 (422)
Q Consensus 4 tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~--~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~ 81 (422)
+||++..||++++||++|.++|++|+.+ .++.. ++...+++.+.||.|+||+|++++.+|+||.||++||++.++..
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~-~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYV-PVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEE-ecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 5898889999999999999999999996 66642 24557889999999999999985449999999999999999887
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHH----hhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccC--CccccCC
Q 014592 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNIL----RWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASN--TYLVGHS 155 (422)
Q Consensus 82 ~L~g~~~~e~a~v~~wl~~~~~~l~~~~~----~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~--tfLvGe~ 155 (422)
.|+|.++.+++++++|+.++.+.+.+... .++....+ .......+...+.+.+.|+.||++|.++ .||+|++
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 157 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLG--VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDT 157 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCC
Confidence 89999999999999999998876654321 11111111 1122233445667999999999999864 5999999
Q ss_pred CCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 156 iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
+|+|||++++.+.++.....+ .+.||+|.+|+++|.++|.+++++...
T Consensus 158 ~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 158 PTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 999999999999876543322 468999999999999999999988654
No 13
>PRK11752 putative S-transferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=230.20 Aligned_cols=200 Identities=22% Similarity=0.231 Sum_probs=155.0
Q ss_pred ceEEEecCCCchHHHHHHHHHhc------CCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCC---e-eeecHHHH
Q 014592 2 PLVLHAGNTNKNAFKALITAEYT------GVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPD---G-PIFESNAI 70 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~------gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~d---g-~l~ES~AI 70 (422)
+++||+.+ ||++++|+++|+++ |++|+.+ .+++. .++.+++|+++||.|+||+|++++ | +|+||.||
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~-~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAW-LIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEE-EecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHH
Confidence 57999975 89999999999997 8899986 66642 345688999999999999999875 3 89999999
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCC-CHHHHHHHHHHHHHHHHHHHHhhccCC
Q 014592 71 ARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY-LPQAEEAAIASLKRALAALNTHLASNT 149 (422)
Q Consensus 71 a~YL~~~~~~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~L~~Le~~L~~~t 149 (422)
++||++.++ .|+|.++.+++++++|+.|+...+ ......+.......+. .....+.....+.+.|+.||++|.+++
T Consensus 122 l~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHE 198 (264)
T ss_pred HHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999876 499999999999999999987653 2111111111111111 133456667788999999999999999
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhhc-cC-cc--ccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 150 YLVGHSVTLADIIMTCNLTLGFSRI-LS-KS--FTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 150 fLvGe~iTlADI~l~~~L~~~~~~~-~~-~~--~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
||+|+++|+|||++++.+.++.... .+ .. ....||+|.+|+++|.++|+|+++....
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 9999999999999998876653211 01 11 1468999999999999999999987543
No 14
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.2e-26 Score=214.42 Aligned_cols=196 Identities=22% Similarity=0.266 Sum_probs=168.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhC-CCCcccEEEcCCeeeecHHHHHHHHhhccC-C
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMN-PIGKVPVLETPDGPIFESNAIARYVARLKA-D 80 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~-P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~-~ 80 (422)
.+||++-.||+++|++|+|+++||+|+.+ ..++ .++++.++++| +.+|||||+.+++.|+||+.|++||++.++ .
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~v-eedl--~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYV-EEDL--TNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEE-ecCC--CCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 68999999999999999999999999997 7765 46999999999 689999999999999999999999999999 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhc-cCCccccCCCCHH
Q 014592 81 NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA-SNTYLVGHSVTLA 159 (422)
Q Consensus 81 ~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~-~~tfLvGe~iTlA 159 (422)
.+++|.|++++|+.+-|+++++..+.......+... +....+.+.+.+...|..||+.|. +.+|+.|+++++.
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~------~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~v 160 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAK------GGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFV 160 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhc------CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHh
Confidence 899999999999999999999987655544333221 235667888899999999999999 8899999999999
Q ss_pred HHHHHHHHHHHhhhcc-----CccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 160 DIIMTCNLTLGFSRIL-----SKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 160 DI~l~~~L~~~~~~~~-----~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
||++++.+.+...... .......+|.|.+|.++|.+++.|++++.+.+
T Consensus 161 Di~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e 213 (231)
T KOG0406|consen 161 DIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSE 213 (231)
T ss_pred hhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHH
Confidence 9999987776554421 12226789999999999999999999987764
No 15
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.4e-25 Score=193.82 Aligned_cols=198 Identities=20% Similarity=0.217 Sum_probs=166.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCC--CCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV--TNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD 80 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~--~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~ 80 (422)
..||.+-.|..+++||+|+.++||+|+.. .+++-. ...+.+|.+.||.++||+|+.++-+|+||.||+.||++.+|+
T Consensus 6 piLYSYWrSSCswRVRiALaLK~iDYey~-PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ 84 (217)
T KOG0868|consen 6 PILYSYWRSSCSWRVRIALALKGIDYEYK-PVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPD 84 (217)
T ss_pred chhhhhhcccchHHHHHHHHHcCCCccee-ehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCC
Confidence 48999999999999999999999999997 665422 345679999999999999999888999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc--CCccccCCCCH
Q 014592 81 NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTL 158 (422)
Q Consensus 81 ~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~iTl 158 (422)
++|+|+++..+|.+++....+.+.+.|.-...++..++....... ..-+...+.+.|..||+.|.. +.|-||+.+|+
T Consensus 85 ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~-~~W~q~~ItkGF~ALEklL~~~aGkycvGDevti 163 (217)
T KOG0868|consen 85 PPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG-DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTI 163 (217)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh-hHHHHHHHHHhHHHHHHHHHHccCCcccCceeeh
Confidence 999999999999999999999998888765555555542221111 445566788899999999975 58999999999
Q ss_pred HHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhc
Q 014592 159 ADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (422)
Q Consensus 159 ADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~ 205 (422)
||+++.+.++.+-....+ ..+||.+.|-.+++...|.|+..+.+
T Consensus 164 ADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 164 ADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred hhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 999999999877444445 78999999999999999999986654
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.93 E-value=8.4e-25 Score=204.33 Aligned_cols=182 Identities=24% Similarity=0.319 Sum_probs=140.8
Q ss_pred cCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCCCCCCC
Q 014592 8 GNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSS 87 (422)
Q Consensus 8 ~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~L~g~~ 87 (422)
+..||+|++|+++|+++|++|+.+ .+++ .+++++|++.||.|+||+|++++++|+||.||++||++++++..+ .+
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~-~v~~--~~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~~ 91 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIH-LINL--SDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--KT 91 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEE-EeCc--ccCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--CC
Confidence 356999999999999999999997 7776 357789999999999999998877999999999999999886655 35
Q ss_pred HHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhc--cCCccccCCCCHHHHHHHH
Q 014592 88 LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMTC 165 (422)
Q Consensus 88 ~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~iTlADI~l~~ 165 (422)
+.+++.+.+++.. .+..+.... ...+.....+.+.|..||++|. +++||+|+++|+|||++++
T Consensus 92 ~~~~a~i~~~~~~-------~~~~~~~~~--------~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~ 156 (213)
T PLN02378 92 PAEFASVGSNIFG-------TFGTFLKSK--------DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAP 156 (213)
T ss_pred HHHHHHHHHHHHH-------HHHHHHhcC--------ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHH
Confidence 6777777664422 111111110 1123444677788999999998 4799999999999999999
Q ss_pred HHHHHhhh---ccCccccccCccHHHHHHHHhcCchhHHHhhccccc
Q 014592 166 NLTLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQA 209 (422)
Q Consensus 166 ~L~~~~~~---~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~ 209 (422)
.+.++... .......+.||+|.+|+++|.++|+++.++....++
T Consensus 157 ~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~ 203 (213)
T PLN02378 157 KLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYV 203 (213)
T ss_pred HHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHH
Confidence 98764321 112223478999999999999999999988876655
No 17
>PRK10387 glutaredoxin 2; Provisional
Probab=99.92 E-value=1.4e-24 Score=201.76 Aligned_cols=185 Identities=19% Similarity=0.172 Sum_probs=137.3
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~ 81 (422)
+|||+++.||+|++++++|+++|++|+.+ .+..+ ... .....+|.|+||+|+.++| .|+||.||++||+++++.+
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~-~~~~~-~~~--~~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELI-VLAND-DEA--TPIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEE-EcCCC-chh--hHHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 58999999999999999999999999986 66432 122 2257899999999975566 9999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHH---------------------HHHHHHHHHHHHHHH
Q 014592 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQ---------------------AEEAAIASLKRALAA 140 (422)
Q Consensus 82 ~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~---------------------~~~~~~~~l~~~L~~ 140 (422)
.+.| .+++.+++|++++...+...+...+....-....... ..+...+.+.+.|+.
T Consensus 77 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (210)
T PRK10387 77 LLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRA 153 (210)
T ss_pred cCCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 4432 2578899999988665544332221110000000000 113567789999999
Q ss_pred HHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchh
Q 014592 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 141 Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
||++|++ +||+|+++|+|||++++.+.++.... + ...+|+|.+|+++|.++|.+
T Consensus 154 le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~-~---~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 154 LDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK-G---IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec-C---CCCCHHHHHHHHHHHHHhCC
Confidence 9999987 99999999999999999998765421 1 12469999999999999876
No 18
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.92 E-value=1.8e-24 Score=200.76 Aligned_cols=186 Identities=20% Similarity=0.259 Sum_probs=137.2
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHh--------hhCCCCcccEEEcCCeeeecHHHHHHHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFL--------KMNPIGKVPVLETPDGPIFESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~--------~~~P~gkVPvL~~~dg~l~ES~AIa~YL 74 (422)
++||+++.++++++||++|+++|++|+.+ .+. +.. ++++ ..||.|+||+|++++.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~-~~~---~~~-~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDK-RFG---ENG-DAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEE-ecc---ccc-hHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 79999999999999999999999999986 553 122 2443 4799999999998666999999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHhc-cchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccC--Ccc
Q 014592 75 ARLKADNPLLGSSLIDSAHIEQWIDFSSL-EIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASN--TYL 151 (422)
Q Consensus 75 ~~~~~~~~L~g~~~~e~a~v~~wl~~~~~-~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~--tfL 151 (422)
++.++ +.|.+..+++. .|+.+... .+...+... ..+.....+...+.+.+.+..||++|.++ +||
T Consensus 80 a~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l 147 (205)
T PTZ00057 80 SKKYK---ICGESELNEFY--ADMIFCGVQDIHYKFNNT-------NLFKQNETTFLNEELPKWSGYFENILKKNHCNYF 147 (205)
T ss_pred HHHcC---CCCCCHHHHHH--HHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 99875 44655544444 44433321 222111110 00112233456678999999999999764 899
Q ss_pred ccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 152 VGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 152 vGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
+|+++|+||+++++.+.++... .+ ....+||+|.+|+++|.++|.+++++.+..
T Consensus 148 ~Gd~~T~AD~~l~~~~~~~~~~-~~-~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 148 VGDNLTYADLAVFNLYDDIETK-YP-NSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred eCCcccHHHHHHHHHHHHHHHh-Ch-hhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 9999999999999988765321 22 225789999999999999999999997754
No 19
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.91 E-value=3.1e-23 Score=195.74 Aligned_cols=182 Identities=16% Similarity=0.174 Sum_probs=140.6
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCC---CCCCC
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD---NPLLG 85 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~---~~L~g 85 (422)
+.||+|++|++++.++|++|+.+ .+++ .+++++|+++||.|+||||++++.+|+||.||++||++.++. +.+.+
T Consensus 17 ~~cp~~~rv~i~L~ekgi~~e~~-~vd~--~~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p 93 (236)
T TIGR00862 17 GNCPFSQRLFMILWLKGVVFNVT-TVDL--KRKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSP 93 (236)
T ss_pred CCCHhHHHHHHHHHHcCCCcEEE-EECC--CCCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCC
Confidence 46899999999999999999997 7776 356899999999999999998666999999999999998864 44666
Q ss_pred CCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhc------------------c
Q 014592 86 SSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA------------------S 147 (422)
Q Consensus 86 ~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~------------------~ 147 (422)
.++..++... ++...+..++ .+ .++...+.+...+.+.|+.||++|. +
T Consensus 94 ~~~~~~~~~~--------~l~~~~~~~~---~~---~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~ 159 (236)
T TIGR00862 94 KHPESNTAGL--------DIFAKFSAYI---KN---SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSR 159 (236)
T ss_pred CCHHHHHHHH--------HHHHHHHHHH---Hc---CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccC
Confidence 6665444321 1222222221 11 1233445566778999999999997 5
Q ss_pred CCccccCCCCHHHHHHHHHHHHHhhh---ccCccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 148 NTYLVGHSVTLADIIMTCNLTLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 148 ~tfLvGe~iTlADI~l~~~L~~~~~~---~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
++||.|+++|+|||++++.|.++... ..+..+.+.||+|.+|++++.++|+|+.++....
T Consensus 160 ~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~ 222 (236)
T TIGR00862 160 RKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDK 222 (236)
T ss_pred CCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChH
Confidence 79999999999999999999876532 3344446899999999999999999999876543
No 20
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.91 E-value=3.2e-23 Score=199.42 Aligned_cols=178 Identities=19% Similarity=0.266 Sum_probs=138.8
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCCCCCCCH
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSL 88 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~L~g~~~ 88 (422)
..||++++++++|+++|++|+.+ .+++ .+++++|+++||.|+||+|+++++.|+||.||++||++.++...|. ++
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~-~vdl--~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~ 145 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMK-LVDL--TNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TP 145 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEE-EeCc--CcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CH
Confidence 35999999999999999999986 7765 3578899999999999999988779999999999999999876663 57
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCccccCCCCHHHHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~iTlADI~l~~~L 167 (422)
.+++.+.+|+... +..++. . .+. .+...+.+...|..||++|.+ ++||+|+++|+|||++++.|
T Consensus 146 ~era~i~~~l~~~-------~~~~~~---~---~~~--~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L 210 (265)
T PLN02817 146 PEKASVGSKIFST-------FIGFLK---S---KDP--GDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKL 210 (265)
T ss_pred HHHHHHHHHHHHH-------HHHHhc---c---CCc--chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHH
Confidence 7899988875321 111111 1 011 122335677889999999984 69999999999999999998
Q ss_pred HHHhhh---ccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 168 TLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 168 ~~~~~~---~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
.++... ..+-...+.||+|.+|+++|.++|+|+.++...
T Consensus 211 ~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~ 252 (265)
T PLN02817 211 YHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALP 252 (265)
T ss_pred HHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCH
Confidence 764321 112223578999999999999999999987654
No 21
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.1e-22 Score=186.83 Aligned_cols=197 Identities=24% Similarity=0.268 Sum_probs=157.0
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCC
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADN 81 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~ 81 (422)
+++|+|++..+++..+|+++.++|++|+.. ++..+. .+.......|+|+||+|+.++..|.||.||+|||++.+
T Consensus 3 ~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~-r~~~~~--~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~--- 76 (206)
T KOG1695|consen 3 PYKLTYFNIRGLAEPIRLLFAYAGVSFEDK-RITMED--AWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKF--- 76 (206)
T ss_pred ceEEEecCcchhHHHHHHHHHhcCCCccee-eecccc--chhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHh---
Confidence 479999999999999999999999999997 777632 15666677999999999988669999999999999964
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHhhhc-ccccccCCCHHHHH-HHHHHHHHHHHHHHHhhc--cCCccccCCCC
Q 014592 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFI-PRVGFAVYLPQAEE-AAIASLKRALAALNTHLA--SNTYLVGHSVT 157 (422)
Q Consensus 82 ~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~l~~~L~~Le~~L~--~~tfLvGe~iT 157 (422)
+|.|+|+.|+|+|+...+-..+-.......... +..| ..+...+ .........+..+++.|. .+.||||+++|
T Consensus 77 gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g---~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT 153 (206)
T KOG1695|consen 77 GLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAG---KSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLT 153 (206)
T ss_pred CcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhc---cchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCccc
Confidence 599999999999998887766533332222222 1222 1112222 455677888999999998 45899999999
Q ss_pred HHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcccc
Q 014592 158 LADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQ 208 (422)
Q Consensus 158 lADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~ 208 (422)
+||++++..+..+... +++.....+|+|..+.++|.++|.+++++.....
T Consensus 154 ~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 154 WADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred HHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 9999999999877664 5566577899999999999999999999987654
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.89 E-value=2.8e-22 Score=215.21 Aligned_cols=165 Identities=22% Similarity=0.331 Sum_probs=135.7
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccC
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~ 79 (422)
|+++||+.+.+ .+.+++++|++.|++|+.+ . .+|.|+||+|++++| +|+||.||++||++.++
T Consensus 1 ~~~kLy~~~~S-~~~~v~~~L~~lgv~~e~~-~--------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p 64 (722)
T PLN02907 1 MEAKLSFPPDS-PPLAVIAAAKVAGVPLTID-P--------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSAS 64 (722)
T ss_pred CeEEEEECCCC-ChHHHHHHHHHcCCCcEEe-e--------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCC
Confidence 89999998765 4778999999999999986 2 268999999998788 99999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHH
Q 014592 80 DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLA 159 (422)
Q Consensus 80 ~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlA 159 (422)
...|+|.++.+++++++|+.++..... ...+...|+.||.+|..++||+|+++|+|
T Consensus 65 ~~~L~p~d~~erAqV~qWL~~~~~~~~------------------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLA 120 (722)
T PLN02907 65 LPGFYGQDAFESSQVDEWLDYAPTFSS------------------------GSEFENACEYVDGYLASRTFLVGYSLTIA 120 (722)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhhccc------------------------HHHHHHHHHHHHHHhccCCeecCCCCCHH
Confidence 888999999999999999999864210 01356778999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCch--hHHHhhc
Q 014592 160 DIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPN--FRKILGE 205 (422)
Q Consensus 160 DI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~--~k~v~~~ 205 (422)
||++++.+..+............||||.||+++|.++|+ +..+...
T Consensus 121 DIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs~~~~~~~~a 168 (722)
T PLN02907 121 DIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDILNEVTAA 168 (722)
T ss_pred HHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCCcchhhHHHH
Confidence 999999886542222222235789999999999999999 4444443
No 23
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.88 E-value=5.3e-22 Score=184.93 Aligned_cols=182 Identities=18% Similarity=0.207 Sum_probs=132.2
Q ss_pred EEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCCC
Q 014592 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNP 82 (422)
Q Consensus 4 tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~~ 82 (422)
|||++..||+|++|+++|.++|++|+.+ .+.. .. ....++.||.|+||+|+.++| .|+||.+|++||+++++.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~-~~~~-~~--~~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKH-VLLN-DD--EETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEE-ECCC-Cc--chhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 6999999999999999999999999986 5543 12 223478899999999985566 99999999999999987643
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCC----------CHH------------HHHHHHHHHHHHHHH
Q 014592 83 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY----------LPQ------------AEEAAIASLKRALAA 140 (422)
Q Consensus 83 L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~----------~~~------------~~~~~~~~l~~~L~~ 140 (422)
+.|. .++++.+|+.++...+...+...+... ..... ++. ..+...+.+.+.|+.
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 152 (209)
T TIGR02182 77 LTGK---VSPEIEAWLRKVTGYANKLLLPRFAKS-DLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEE 152 (209)
T ss_pred CCCC---ChHHHHHHHHHHHHHhhhhhccccccC-CCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHH
Confidence 4332 457788898886665533322111110 00000 000 013566778999999
Q ss_pred HHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCc-cHHHHHHHHhcCchh
Q 014592 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFP-HIERYFWTMVNIPNF 199 (422)
Q Consensus 141 Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P-~L~rw~~tv~~~P~~ 199 (422)
||++|.+++||+| ++|+|||++++.+.++.... + ..+| +|.+|+++|.+++.+
T Consensus 153 le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 153 LDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 9999999999965 59999999999987654321 1 1356 999999999998765
No 24
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.81 E-value=1.4e-19 Score=166.49 Aligned_cols=204 Identities=23% Similarity=0.268 Sum_probs=150.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCC-
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD- 80 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~- 80 (422)
+.||..+.|..+++||+++..+||+++.. +|+.. +++..++|...||.|.||||+.++.+|+++.-|+.||++.+-+
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y-~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ge 105 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEY-DVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGE 105 (325)
T ss_pred ceeeecCcccccceeeeehhhccccccee-eccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhccc
Confidence 68999999999999999999999999876 66543 6789999999999999999999888999999999999997643
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHhccchhh--HHhhhcccc---------c------------------------------
Q 014592 81 NPLLGSS-LIDSAHIEQWIDFSSLEIDTN--ILRWFIPRV---------G------------------------------ 118 (422)
Q Consensus 81 ~~L~g~~-~~e~a~v~~wl~~~~~~l~~~--~~~~~~~~~---------g------------------------------ 118 (422)
..|.|.- ..+..++.+.-...+..=... .+.+++|-+ +
T Consensus 106 r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~a 185 (325)
T KOG4420|consen 106 RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLA 185 (325)
T ss_pred ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHH
Confidence 3466531 112222222211111000000 000011100 0
Q ss_pred ---------ccCCCHHHHHHHHHHHHHHHHHHHHhhcc----CCccccCCCCHHHHHHHHHHHHHhhhccCccccc--cC
Q 014592 119 ---------FAVYLPQAEEAAIASLKRALAALNTHLAS----NTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTS--EF 183 (422)
Q Consensus 119 ---------~~~~~~~~~~~~~~~l~~~L~~Le~~L~~----~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~--~~ 183 (422)
...-+.......+..+...|..+|+.|.. .+||+|+.+|+|||.+..+|+++....+...+.. ..
T Consensus 186 kqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsr 265 (325)
T KOG4420|consen 186 KQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSR 265 (325)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCC
Confidence 01112334456667778888888888887 5999999999999999999999999988877766 78
Q ss_pred ccHHHHHHHHhcCchhHHHhhccc
Q 014592 184 PHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 184 P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
|||..||.+|..+++|++++|+.-
T Consensus 266 pnle~Yf~rvrrR~sf~kvlg~~f 289 (325)
T KOG4420|consen 266 PNLESYFERVRRRFSFRKVLGDIF 289 (325)
T ss_pred ccHHHHHHHHHhhhHHHHhhhhHH
Confidence 999999999999999999999863
No 25
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.60 E-value=4.2e-15 Score=126.04 Aligned_cols=121 Identities=38% Similarity=0.752 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~ 169 (422)
+++++++|+.++++.+.+.+..++.+..+..+.+....+...+.+.+.|+.||++|..++||+|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 36889999999999999988777666555455677788889999999999999999999999999999999999999988
Q ss_pred HhhhccCccccccCccHHHHHHHHhcCchhHHHhhcccccc
Q 014592 170 GFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (422)
Q Consensus 170 ~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~~ 210 (422)
+.....+..+...+|+|.+|++++.++|.|++++.+.++|+
T Consensus 81 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~ 121 (123)
T cd03181 81 GFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKLCE 121 (123)
T ss_pred HHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCcCC
Confidence 76554444445789999999999999999999999999986
No 26
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.59 E-value=2.1e-14 Score=129.16 Aligned_cols=185 Identities=19% Similarity=0.210 Sum_probs=141.3
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCCCCCCCHH
Q 014592 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLI 89 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~L~g~~~~ 89 (422)
.||+++++.+.|...|++|++. .+++ ..++++|+.++|.|++|+|..++...+||..|-++|.+.++.+.+.--.+.
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vt-tVd~--~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~ 96 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVT-TVDL--SRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPP 96 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEE-Eeec--CCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCH
Confidence 5999999999999999999986 7776 467899999999999999998777999999999999999886554332233
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc---CCccccCCCCHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS---NTYLVGHSVTLADIIMTCN 166 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~---~tfLvGe~iTlADI~l~~~ 166 (422)
|.+.+ .+.+...+..++.. ..+++-+.....+.+.|..||+||.+ ++||.|+++|+||+.+++-
T Consensus 97 E~asa-------g~diF~kF~~fi~k------sk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPK 163 (221)
T KOG1422|consen 97 ESASA-------GSDIFAKFSAFIKK------SKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPK 163 (221)
T ss_pred HHHhh-------HHHHHHHHHHHHhC------chhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchh
Confidence 44432 22333333333211 12223345556778888999999986 7999999999999999999
Q ss_pred HHHH---hhhccCccccccCccHHHHHHHHhcCchhHHHhhcccccc
Q 014592 167 LTLG---FSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (422)
Q Consensus 167 L~~~---~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~~ 210 (422)
|+.+ ..+..+-++.+.+++|.||+..+.++..|...+..-+.+.
T Consensus 164 L~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~ 210 (221)
T KOG1422|consen 164 LHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEII 210 (221)
T ss_pred HHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHH
Confidence 9864 2334456678889999999999999999998887665554
No 27
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.57 E-value=1e-14 Score=113.30 Aligned_cols=73 Identities=52% Similarity=0.771 Sum_probs=66.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~ 76 (422)
.+||+++.|+++++++++++++|++|+.+ .++...+++.++|++.||.|+||+|+.++| +|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~~~~~l~~~gi~~~~~-~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 1 GTLYTYPGNPRSLKILAAAKYNGLDVEIV-DFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CeEecCCCCccHHHHHHHHHHcCCceEEE-ecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 38999999999999999999999999997 777654477899999999999999998777 99999999999976
No 28
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=2.6e-14 Score=120.54 Aligned_cols=114 Identities=18% Similarity=0.163 Sum_probs=93.1
Q ss_pred CCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHH
Q 014592 86 SSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTC 165 (422)
Q Consensus 86 ~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~ 165 (422)
.++..+++|+||+++.+.++.+.+..+++...- .++..+.+.+.+.+.+..||++|++++||+|+++|+|||++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~ 77 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRY----PEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFP 77 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhc----CcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHH
Confidence 367889999999999999999998887776533 2234778889999999999999999999999999999999998
Q ss_pred HHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 166 ~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
.+.++............||+|.+|+++|.++|+|++++
T Consensus 78 ~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 78 FVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 87654322111111478999999999999999999753
No 29
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.54 E-value=1.3e-14 Score=113.22 Aligned_cols=73 Identities=44% Similarity=0.645 Sum_probs=60.5
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCC-CcccEEEcCCe-eeecHHHHHHHHhh
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPI-GKVPVLETPDG-PIFESNAIARYVAR 76 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~-gkVPvL~~~dg-~l~ES~AIa~YL~~ 76 (422)
|.++||..++ |+.++|++++++|++|+.+ .+++. +++++++|++.||. |+||+|++++| +|+||+||++||++
T Consensus 1 ~~l~l~~~~~--~~~~~r~~l~~~gv~~e~~-~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRG--RSERIRLLLAEKGVEYEDV-RVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSST--TTHHHHHHHHHTT--EEEE-EEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCC--chHHHHHHHHHhcccCceE-EEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 5566666554 9999999999999999997 77752 44566999999999 99999999956 99999999999985
No 30
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.53 E-value=3.4e-14 Score=109.67 Aligned_cols=73 Identities=29% Similarity=0.358 Sum_probs=64.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
++||+++.||+|++++++|+++|++|+.+ .+++. ++...++|++.||.|+||+|++++..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLK-EVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEE-EecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 58999999999999999999999999986 66652 345679999999999999999875599999999999964
No 31
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.52 E-value=1e-13 Score=116.44 Aligned_cols=111 Identities=24% Similarity=0.270 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHhhhcccccc------cCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHH
Q 014592 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGF------AVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLAD 160 (422)
Q Consensus 87 ~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~------~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlAD 160 (422)
++.+++++++|+.|+++.+.+++...+.+.... ...+....+.....+.+.|..||++|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 467899999999999999988877666554322 23557778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchh
Q 014592 161 IIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 161 I~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
|++++.+.++.... ..++..+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~--~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVK--LRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcC--CCCccccHHHHHHHHHHHhccCC
Confidence 99999998765433 33457899999999999999974
No 32
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.52 E-value=5.6e-14 Score=110.68 Aligned_cols=75 Identities=35% Similarity=0.538 Sum_probs=66.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCC--e-eeecHHHHHHHHhhcc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPD--G-PIFESNAIARYVARLK 78 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~d--g-~l~ES~AIa~YL~~~~ 78 (422)
++||+++. |+|++++++|+++|++|+.+ .+++. +.+..++|++.||.|+||+|++++ | +|+||.||++||++.+
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIH-PVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEE-EecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 69999886 99999999999999999986 67653 346778999999999999999885 6 9999999999999876
Q ss_pred C
Q 014592 79 A 79 (422)
Q Consensus 79 ~ 79 (422)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 4
No 33
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.51 E-value=7.7e-14 Score=116.31 Aligned_cols=111 Identities=24% Similarity=0.369 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhccccccc--CCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFA--VYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~--~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L 167 (422)
+++++++|+.|+.+.+.+.+..++.+..... ...+...+...+.+.+.++.||++|.+++||+|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 4799999999999999988766655432211 11245567788899999999999999999999999999999999998
Q ss_pred HHHhhhccCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 168 TLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
.++.....+ ...+|+|.+|+++|.++|.|++++
T Consensus 82 ~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 765443222 457999999999999999999763
No 34
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.51 E-value=6.1e-14 Score=108.50 Aligned_cols=72 Identities=26% Similarity=0.408 Sum_probs=63.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+++.|+++++++++|.++|++|+.+ .++.. ++.+.++|++.||.|+||+|++++.+|+||.||++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEY-DVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEE-EecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999997 66553 34567899999999999999975559999999999984
No 35
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.50 E-value=9.1e-14 Score=106.89 Aligned_cols=72 Identities=26% Similarity=0.471 Sum_probs=64.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~ 77 (422)
++||+.+.||+|++++++++..|++|+.+ .++. .+..++|++.||.|+||+|++++..|+||.||++||+++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~-~v~~--~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 72 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEII-DVDP--DNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDER 72 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEE-EcCC--CCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 58999999999999999999999999986 6664 356789999999999999998777999999999999874
No 36
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.50 E-value=6.3e-14 Score=108.88 Aligned_cols=74 Identities=34% Similarity=0.433 Sum_probs=66.0
Q ss_pred EEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCC
Q 014592 5 LHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADN 81 (422)
Q Consensus 5 Ly~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~ 81 (422)
||+++.||+|++++++++++|++|+.+ .+.. ....+++.+.+|.|+||+|++++..|+||.+|++||++++++.
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~-~v~~--~~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELV-PVDP--EEKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEE-EEBT--TSTSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEe-ccCc--ccchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 899999999999999999999999997 6664 3458999999999999999966449999999999999988754
No 37
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.50 E-value=5.9e-14 Score=117.15 Aligned_cols=112 Identities=20% Similarity=0.185 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~ 169 (422)
+++++++|+.|.++.+.+.+..++.........++...+.....+.+.+..||++|++++||+|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 36899999999999999887655333211123456677888899999999999999999999999999999999999987
Q ss_pred HhhhccCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 170 GFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 170 ~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
......+ ....+|+|.+|+++|.++|.+++++
T Consensus 81 ~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWIGID--DLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhcccc--chhhchHHHHHHHHHhhCHHHHHhc
Confidence 6444322 3678999999999999999999864
No 38
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.49 E-value=2.1e-13 Score=114.94 Aligned_cols=110 Identities=25% Similarity=0.369 Sum_probs=87.7
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhHHhhh-ccccccc-------CCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCC
Q 014592 85 GSSLIDSAHIEQWIDFSSLEIDTNILRWF-IPRVGFA-------VYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSV 156 (422)
Q Consensus 85 g~~~~e~a~v~~wl~~~~~~l~~~~~~~~-~~~~g~~-------~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~i 156 (422)
|.++.+++++++|+.+..+.+.+.+...+ ....+.. ..++...+.+...+.+.|+.||++|.+++||+|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 46788999999999999999988865432 2222211 123555667778899999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCc
Q 014592 157 TLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIP 197 (422)
Q Consensus 157 TlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P 197 (422)
|+|||++++.+.++..... ....+|+|.+|+++|.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 9999999999887754332 3678999999999999986
No 39
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.48 E-value=1.5e-13 Score=105.49 Aligned_cols=68 Identities=35% Similarity=0.464 Sum_probs=62.2
Q ss_pred EEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHH
Q 014592 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYV 74 (422)
Q Consensus 4 tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL 74 (422)
+||+++.||+|++++++|+++|++|+.+ .++. ..+.++|++.||.|+||+|+++|| .|+||.||++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~-~v~~--~~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELR-EVEL--KNKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEE-EeCC--CCCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999999999999999999987 7765 345789999999999999999877 999999999997
No 40
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.48 E-value=1.8e-13 Score=106.45 Aligned_cols=74 Identities=32% Similarity=0.392 Sum_probs=64.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~ 77 (422)
++||+.+.|+++++++++++++|++|+.+ .++.. .+...+++.+.||.|+||+|++++.+|+||.||++||++.
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~-~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~ 75 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEEC-PIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARK 75 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEE-EecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 48999999999999999999999999987 77653 2345678999999999999997656999999999999875
No 41
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.48 E-value=1.8e-13 Score=106.19 Aligned_cols=73 Identities=38% Similarity=0.582 Sum_probs=64.6
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
++||+.+.||+|++++++++++|++|+.+ .++.. .++..++|.+.||.|+||+|++++..|+||.||++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELV-PVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEE-EeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhh
Confidence 69999999999999999999999999986 66653 235678999999999999999875599999999999976
No 42
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.48 E-value=1.2e-13 Score=107.93 Aligned_cols=73 Identities=23% Similarity=0.215 Sum_probs=63.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcC-Ce-eeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETP-DG-PIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~-dg-~l~ES~AIa~YL~~~ 77 (422)
++||+++.||+|++++++|.+.|++|+.+ .+.. .....+++++.||.|+||+|+++ +| .|+||.+|++||+++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~-~v~~-~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~ 76 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILY-PCPK-GSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKT 76 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEE-ECCC-ChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHh
Confidence 79999999999999999999999999987 6643 23346789999999999999985 46 999999999999874
No 43
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.47 E-value=1.8e-13 Score=106.57 Aligned_cols=75 Identities=33% Similarity=0.489 Sum_probs=64.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~ 79 (422)
++||+++.+ ++++++++|.++|++|+.+ .++.. +++++++|++.||.|+||+|++++| .|+||.||++||++.+|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELV-RVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEE-EEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 489998865 5899999999999999986 66542 3466899999999999999999877 99999999999998654
No 44
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.47 E-value=3.5e-13 Score=113.10 Aligned_cols=112 Identities=24% Similarity=0.373 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhc-----ccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFI-----PRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMT 164 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~ 164 (422)
+++++.+|+.|..+.+.+.+..++. +..+ .+.++...+.....+.+.|+.||++|++++||+|+++|+|||+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~ 80 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLG-LPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHL 80 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHH
Confidence 5789999999999888877654322 2222 245677778888999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 165 ~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
+.+.++.... ....++.+|+|.+|+++|.++|.+++++
T Consensus 81 ~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 81 PYLQYLMATP-FAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHcc-chhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 9987765421 1223568999999999999999998753
No 45
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.47 E-value=2.1e-13 Score=105.20 Aligned_cols=72 Identities=40% Similarity=0.511 Sum_probs=63.6
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+++.|+++++++++|+++|++|+.+ .++.. ++...++|.+.||.|+||+|++++..|+||.||++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~-~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERI-DAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEE-EeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 48999999999999999999999999986 66532 34567899999999999999988779999999999984
No 46
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.47 E-value=2.3e-13 Score=104.50 Aligned_cols=72 Identities=36% Similarity=0.511 Sum_probs=63.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccC-CCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEM-GVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~-~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
+|||+++.||+|++++++|+++|++|+.+ .+++ .++...++|.+.||.|+||+|++++..|+||.||++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~-~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWV-EVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEE-EecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999987 6664 234577899999999999999987449999999999984
No 47
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.46 E-value=2.5e-13 Score=104.38 Aligned_cols=72 Identities=40% Similarity=0.590 Sum_probs=63.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~ 75 (422)
++||+++.||+|++++++|.++|++|+.+ .++.. .+...+++.+.||.|+||+|+.++| .|+||.||++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~-~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLV-TVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEE-EeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 48999999999999999999999999986 66653 3356788999999999999998777 9999999999984
No 48
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.45 E-value=5.5e-13 Score=113.44 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~ 168 (422)
.+++++++|+.++++.+.+.+...+.+ .+...+.....+.+.++.||++|..++||+|+++|+|||++++.+.
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~ 74 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-------KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLG 74 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Confidence 478999999999999888877655432 1455667888999999999999998999999999999999999988
Q ss_pred HHhhh--ccCcc--ccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 169 LGFSR--ILSKS--FTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 169 ~~~~~--~~~~~--~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
++... ..+.. ..+.+|++.+|+++|.++|+++.++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 75 WFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 75332 22222 2577999999999999999999987764
No 49
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.45 E-value=3.7e-13 Score=104.32 Aligned_cols=75 Identities=36% Similarity=0.490 Sum_probs=64.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~ 79 (422)
++||+++. +++++++++|+++|++|+.+ .++.. +.++.++|.+.||.|+||+|++++..|+||.||++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELV-LYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEE-EeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 48999875 78999999999999999986 66653 346789999999999999998766699999999999998653
No 50
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.45 E-value=1.9e-13 Score=105.70 Aligned_cols=72 Identities=19% Similarity=0.179 Sum_probs=63.1
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+++||+++.+++++++|++++++|++|+.+ .++. ....+++.+.+|.|+||+|++++..|+||.||++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~-~v~~--~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEE-RVTY--EEWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEE-EecH--HHhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 469999999999999999999999999987 6654 23455788999999999999866699999999999975
No 51
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.45 E-value=7.4e-13 Score=109.62 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~ 168 (422)
.+++++++|+.++++.+.+.+...+.+ .+...+.....+.+.|..||++|.+++||+|+++|+|||++++.+.
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~ 74 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKG-------RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLW 74 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-------cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHH
Confidence 578999999999999888876555432 1455677888999999999999999999999999999999999985
Q ss_pred HHhhhccCccccccCccHHHHHHHHhcCchhHHH
Q 014592 169 LGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKI 202 (422)
Q Consensus 169 ~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v 202 (422)
++... +..+...+|+|.+|+++|.++|+++.+
T Consensus 75 ~~~~~--~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 75 RLPAL--GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHc--CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 44322 322235799999999999999999875
No 52
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.44 E-value=4.5e-13 Score=103.59 Aligned_cols=72 Identities=29% Similarity=0.400 Sum_probs=63.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCC-CcccEEEcCCeeeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPI-GKVPVLETPDGPIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~-gkVPvL~~~dg~l~ES~AIa~YL~~~ 77 (422)
++||+++.||+|++++++++++|++|+.+ .++. ..+.++|.+.||. |+||+|++++..++||.||++||++.
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~-~~~~--~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~ 73 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYV-EEDL--GNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEA 73 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEE-EeCc--ccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhh
Confidence 48999999999999999999999999986 6554 3567899999995 99999998644999999999999874
No 53
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.43 E-value=9.2e-13 Score=109.06 Aligned_cols=107 Identities=27% Similarity=0.444 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhccccc--ccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVG--FAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L 167 (422)
+++++++|+.|..+.+.+.+..++.+... ....++...+...+.+.+.|+.||++|.+++||+|+++|+|||++++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 47899999999999999887665443222 1223456677788999999999999999999999999999999999988
Q ss_pred HHHhhhccCccccccCccHHHHHHHHhcCchh
Q 014592 168 TLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
........ ....||+|.+|+++|.++|.|
T Consensus 82 ~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHccc---ccccCchHHHHHHHHHhCCCC
Confidence 54433221 267899999999999999975
No 54
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.43 E-value=4.8e-13 Score=103.13 Aligned_cols=70 Identities=31% Similarity=0.472 Sum_probs=62.5
Q ss_pred eEEEecCCCchHHHHHHHHHh--cCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEY--TGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~--~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~ 75 (422)
++||+++.||+|+++++++.+ .|++|+.+ .++. ..+.++|++.+|.|+||+|+.++| .++||.||++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~-~~~~--~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELV-LVNP--WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEE-EcCc--ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 489999999999999999999 88999986 6653 456789999999999999998777 9999999999984
No 55
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.43 E-value=2.5e-13 Score=104.47 Aligned_cols=72 Identities=28% Similarity=0.289 Sum_probs=61.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
++||+++.+++|+++|++++++|++|+.+ .++.. ....++|.+.||.|+||+|++++..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDV-RITYE-EWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEE-EeCHH-HhhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999997 66542 22334588899999999999875699999999999964
No 56
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.43 E-value=5.5e-13 Score=107.19 Aligned_cols=72 Identities=29% Similarity=0.409 Sum_probs=63.6
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHh
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~ 75 (422)
|.++||+.+.||+|++++++|++.|++|+.+ .++. ....+++.+.||.|+||+|++++| .|+||.||++||+
T Consensus 17 ~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~-~v~~--~~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 17 GIIRLYSMRFCPYAQRARLVLAAKNIPHEVI-NINL--KDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CcEEEEeCCCCchHHHHHHHHHHcCCCCeEE-EeCC--CCCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 3479999999999999999999999999987 6664 235577999999999999998866 9999999999984
No 57
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.43 E-value=5.7e-13 Score=102.33 Aligned_cols=72 Identities=22% Similarity=0.346 Sum_probs=63.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCC-CCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~-~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+++.|+++++++++++++|++|+.+ .+++. +.+..++|++.+|.|+||+|++++..++||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYV-PVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEE-EecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999986 67652 34567899999999999999988669999999999984
No 58
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.43 E-value=6.9e-13 Score=112.29 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhcccc-cccCC-CHHHHHHHHHHHHHHHHHHHHhhc--cCCccccCCCCHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRV-GFAVY-LPQAEEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMT 164 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~iTlADI~l~ 164 (422)
.+++.+++|+.++.+.+.+.+...+.... +.... .....+...+.+.+.|..||++|. .++||+|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 47899999999999888876422222211 11111 123334455778999999999998 458999999999999999
Q ss_pred HHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhc
Q 014592 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (422)
Q Consensus 165 ~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~ 205 (422)
+.+.++....++ ...+|+|.+|+++|.++|.|+++...
T Consensus 82 ~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 82 PQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 998876544333 47899999999999999999997653
No 59
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.41 E-value=7.8e-13 Score=111.60 Aligned_cols=108 Identities=19% Similarity=0.353 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~ 169 (422)
+++++++|++|..+.+.+.....+.+..... +...+.+..++.+.|+.||++|++++||+|+++|+|||++++.+.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~ 78 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG---AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVST 78 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHH
Confidence 5789999999999989888766655532111 1345667788999999999999989999999999999999999987
Q ss_pred Hhh-hccCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 170 GFS-RILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 170 ~~~-~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
+.. ..++ ...+|+|.+|+++|.++|.+++..
T Consensus 79 ~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 79 LEALLPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHhcCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 754 2222 457999999999999999999754
No 60
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.41 E-value=1.7e-12 Score=113.59 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~ 168 (422)
+.++.|++|++|....+.+....... ..++...+.....+.+.|+.||++|.+++||+|+++|+|||++++.+.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~ 76 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGF------ATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLI 76 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHH
Confidence 45789999999999988777543211 235677788899999999999999999999999999999999999987
Q ss_pred HHhhh---cc--CccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 169 LGFSR---IL--SKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 169 ~~~~~---~~--~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
++... .. +......||+|.+|+++|.++|.+++++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~ 119 (142)
T cd03190 77 RFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFD 119 (142)
T ss_pred HHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHH
Confidence 65321 11 1122468999999999999999999988764
No 61
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.38 E-value=1.2e-12 Score=100.30 Aligned_cols=70 Identities=23% Similarity=0.276 Sum_probs=59.6
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~ 76 (422)
++||+++.||+|+++|++|.++|++|+.+ .++. .......+.+|.|+||+|++++| .|+||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~-~~~~---~~~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQI-ILQN---DDEATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEE-ECCC---CchHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 48999999999999999999999999986 5553 12334567899999999998867 99999999999963
No 62
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=2.5e-12 Score=120.07 Aligned_cols=192 Identities=20% Similarity=0.200 Sum_probs=142.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCC----eEEEEeccCC--CCCCC------------------hhHhhhCCC----Ccc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVN----VELVKNFEMG--VTNKT------------------PEFLKMNPI----GKV 54 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~----~~~~~~~~~~--~~~~~------------------~~f~~~~P~----gkV 54 (422)
+.||..-.||++++.+|+-+++|++ +.++ ...+. ++... +-|....|. -.|
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv-~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTV 130 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVV-HPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTV 130 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEe-cccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeE
Confidence 5799999999999999999999996 2222 21121 11111 122233442 259
Q ss_pred cEEEcCCe---eeecHHHHHHHHhhccC-----CCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHH
Q 014592 55 PVLETPDG---PIFESNAIARYVARLKA-----DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQA 126 (422)
Q Consensus 55 PvL~~~dg---~l~ES~AIa~YL~~~~~-----~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 126 (422)
|||-+... +-.||..|++-+...+. ...|+|.. .+.+|+.|.+++...+...+...-+. -.+++
T Consensus 131 PVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA------~tq~a 202 (324)
T COG0435 131 PVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFA------TTQEA 202 (324)
T ss_pred EEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeeeccc------chHHH
Confidence 99988755 67899999999976543 34688865 58899999999988887776443332 25788
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhcc-----CccccccCccHHHHHHHHhcCchhHH
Q 014592 127 EEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL-----SKSFTSEFPHIERYFWTMVNIPNFRK 201 (422)
Q Consensus 127 ~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~-----~~~~~~~~P~L~rw~~tv~~~P~~k~ 201 (422)
.+++...+-..|+.||.+|+++.||+|+++|-|||-++++|.+.-.... +-.-...||||..|+..+.+.|.|..
T Consensus 203 Yeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~ 282 (324)
T COG0435 203 YEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAE 282 (324)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCccccc
Confidence 8999999999999999999999999999999999999999987433211 11113459999999999999999987
Q ss_pred Hh
Q 014592 202 IL 203 (422)
Q Consensus 202 v~ 203 (422)
.+
T Consensus 283 T~ 284 (324)
T COG0435 283 TV 284 (324)
T ss_pred cc
Confidence 65
No 63
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.37 E-value=1.9e-12 Score=103.91 Aligned_cols=69 Identities=13% Similarity=0.181 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCC
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD 80 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~ 80 (422)
..||+|+++|++|.++|++|+.+ .+++ .+++++|+++||.|+||+|+++|..|+||.+|++||++.++.
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~-~vd~--~~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVT-TVDM--KRKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEE-EeCC--CCCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 45899999999999999999997 7765 467899999999999999998766999999999999998764
No 64
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.36 E-value=4.5e-12 Score=108.05 Aligned_cols=114 Identities=15% Similarity=0.281 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhccchhhHHhhhcc-----cccccCCCHHHHHHHHHHHHHHHHHHHHhh-ccCCccccCCCCHHHHHHH
Q 014592 91 SAHIEQWIDFSSLEIDTNILRWFIP-----RVGFAVYLPQAEEAAIASLKRALAALNTHL-ASNTYLVGHSVTLADIIMT 164 (422)
Q Consensus 91 ~a~v~~wl~~~~~~l~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L-~~~tfLvGe~iTlADI~l~ 164 (422)
++++++|+.|..+.+.+.+...+.. ..+..+.++...+...+.+.+.++.||++| .+++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 5678999999998887765432222 112233467778888899999999999985 5579999999999999999
Q ss_pred HHHHHHhhhccCccccccCccHHHHHHHHhc--CchhHHHhhcc
Q 014592 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVN--IPNFRKILGEI 206 (422)
Q Consensus 165 ~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~--~P~~k~v~~~~ 206 (422)
+.+.++..... ...+.+|+|.+|+++|.+ +|+++++.+-.
T Consensus 82 ~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~~ 123 (126)
T cd03183 82 CEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLFDEAHKII 123 (126)
T ss_pred HHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhHHHHHHHH
Confidence 98876644332 235789999999999999 99999877543
No 65
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.35 E-value=2.6e-12 Score=104.83 Aligned_cols=96 Identities=25% Similarity=0.417 Sum_probs=77.2
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 014592 71 ARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTY 150 (422)
Q Consensus 71 a~YL~~~~~~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tf 150 (422)
+|||++. .+|+|+++.+.+.|+.|+++....+.. ....++.+.+..||++|.+++|
T Consensus 1 ~r~~~~~---~~~~~~~~~~~~~vd~~~d~~~~~l~~---------------------~~~~~~~~~l~~le~~L~~~~f 56 (96)
T cd03200 1 ARFLYRL---LGPAPNAPNAATNIDSWVDTAIFQLAE---------------------GSSKEKAAVLRALNSALGRSPW 56 (96)
T ss_pred CchHHHH---hcccCCCchHHHHHHHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHcCCCc
Confidence 5899996 479999999999999999987644321 1234556788899999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcC
Q 014592 151 LVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNI 196 (422)
Q Consensus 151 LvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~ 196 (422)
|+|+++|+|||++++.+.+. ... ...+|+|.+|+++|.++
T Consensus 57 l~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 57 LVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred cCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 99999999999999988643 111 35799999999999864
No 66
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=2.1e-12 Score=105.70 Aligned_cols=100 Identities=26% Similarity=0.389 Sum_probs=77.3
Q ss_pred HHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhh
Q 014592 94 IEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSR 173 (422)
Q Consensus 94 v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~ 173 (422)
+++|++|..+++.+......+...+.. ....+.+..++.+.++.||++|++++|++|+++|+|||++++.+.+....
T Consensus 1 ~~~w~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~ 77 (100)
T cd03206 1 VQRWLSVAAGEIANGPAAARLITLFGA---PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG 77 (100)
T ss_pred CceehhhhhhhcccchhHHHHHHHhCC---HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc
Confidence 468999999998765544433322221 22456788899999999999999999999999999999999988654332
Q ss_pred ccCccccccCccHHHHHHHHhcCchh
Q 014592 174 ILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 174 ~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
.. ....||+|.+|+++|.++|.+
T Consensus 78 ~~---~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 78 GV---DLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred CC---ChhhCcHHHHHHHHHHhCcCC
Confidence 22 257899999999999999975
No 67
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.33 E-value=2.9e-12 Score=98.20 Aligned_cols=66 Identities=41% Similarity=0.553 Sum_probs=55.7
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeccC--CCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhh
Q 014592 10 TNKNAFKALITAEYTGVNVELVKNFEM--GVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~~~~~~~~~~--~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~ 76 (422)
.||+++|++++++++|++++.. .+.. ....+.++|.+.||.|+||+|++++| +++||.+|++||++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~-~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIK-VVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEE-EEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CchHhHHHHHHHHHhCCCCEEE-EEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 4899999999999999999986 5532 23456689999999999999999888 99999999999986
No 68
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=2.7e-12 Score=105.46 Aligned_cols=100 Identities=24% Similarity=0.391 Sum_probs=81.6
Q ss_pred HHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhc
Q 014592 95 EQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRI 174 (422)
Q Consensus 95 ~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~ 174 (422)
++|+.|..+.+.+.+...+.+. .....+.....+...++.||++|++++||+|+++|+|||++++.+.++...
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~- 74 (103)
T cd03207 2 LRWLFFYAGVVEPALIAKAMGI------EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF- 74 (103)
T ss_pred eeeeeeccccccHHHHHHHcCC------CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-
Confidence 4677788777777765544332 234567778889999999999999999999999999999999999887543
Q ss_pred cCccccccCccHHHHHHHHhcCchhHHHhh
Q 014592 175 LSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (422)
Q Consensus 175 ~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~ 204 (422)
+ +...+|+|.+|++++.++|.++.+..
T Consensus 75 -~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 75 -G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred -C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 2 25789999999999999999998765
No 69
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.32 E-value=1.9e-11 Score=113.87 Aligned_cols=173 Identities=16% Similarity=0.156 Sum_probs=126.2
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCCCCCCCHH
Q 014592 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLI 89 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~L~g~~~~ 89 (422)
-||+|.++.+.+...+|+|+++ .-.+ ...++.|++|.++.++..+.+|.-|..+|.+++.-+..++ ++
T Consensus 60 LSPfClKvEt~lR~~~IpYE~~-~~~~---------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L~--~e 127 (281)
T KOG4244|consen 60 LSPFCLKVETFLRAYDIPYEIV-DCSL---------KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDLS--AE 127 (281)
T ss_pred CChHHHHHHHHHHHhCCCceec-cccc---------eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCCC--HH
Confidence 4999999999999999999987 3221 1467899999999988899999999999998776444343 55
Q ss_pred HHHHHHHHHHHHhccchhhHHhhh------------------------ccccccc------------CCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWF------------------------IPRVGFA------------VYLPQAEEAAIAS 133 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~------------------------~~~~g~~------------~~~~~~~~~~~~~ 133 (422)
++|+......++++++...+..+- .+.++.. ..+.-..++..+.
T Consensus 128 ~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~el 207 (281)
T KOG4244|consen 128 QRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDEL 207 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHH
Confidence 677777777777765554432110 0111000 0111122345566
Q ss_pred HHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCcc----ccccCccHHHHHHHHhc
Q 014592 134 LKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKS----FTSEFPHIERYFWTMVN 195 (422)
Q Consensus 134 l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~----~~~~~P~L~rw~~tv~~ 195 (422)
+.+-|..++..|++..||.|+++|-+|.++++.|..++. .+... +...||||..|.+||.+
T Consensus 208 l~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 208 LHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 788899999999999999999999999999999987765 22222 35679999999999985
No 70
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.32 E-value=5.6e-12 Score=99.74 Aligned_cols=73 Identities=27% Similarity=0.324 Sum_probs=59.2
Q ss_pred EEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCC-CC-CChhHhh-h----CCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV-TN-KTPEFLK-M----NPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 4 tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~-~~-~~~~f~~-~----~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+||++..++++++++++++++|++|+.+ .+++.. +. +.+++.. . .|.|+||+|++++..|+||.||++||++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~-~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEK-RYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEE-EeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhh
Confidence 7999999999999999999999999997 776532 11 1245542 2 3999999999765599999999999987
Q ss_pred c
Q 014592 77 L 77 (422)
Q Consensus 77 ~ 77 (422)
.
T Consensus 81 ~ 81 (82)
T cd03075 81 K 81 (82)
T ss_pred c
Confidence 4
No 71
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.30 E-value=9.4e-12 Score=97.72 Aligned_cols=71 Identities=23% Similarity=0.186 Sum_probs=58.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhh-----CCCCcccEEEcCCeeeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKM-----NPIGKVPVLETPDGPIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~-----~P~gkVPvL~~~dg~l~ES~AIa~YL~~~ 77 (422)
++||+++.++++++++++|+++|++|+.+ .++. .++|.+. .|.|+||+|++++.+|+||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~v~~-----~~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEK-FIES-----AEDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEE-Eecc-----HHHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 58999999999999999999999999986 6653 2333333 36999999997555999999999999986
Q ss_pred cC
Q 014592 78 KA 79 (422)
Q Consensus 78 ~~ 79 (422)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 53
No 72
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=1.1e-11 Score=101.86 Aligned_cols=102 Identities=23% Similarity=0.344 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccc--cccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRV--GFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~--g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L 167 (422)
++|++++|+.+.++.+.+.+........ +..+.++...+.....+.+.++.||++|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 5799999999999988887655433322 23455677888899999999999999999899999999999999999999
Q ss_pred HHHhhhccCccccccCccHHHHHHHHh
Q 014592 168 TLGFSRILSKSFTSEFPHIERYFWTMV 194 (422)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~L~rw~~tv~ 194 (422)
.++.....+ ...+|+|.+|++++.
T Consensus 82 ~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HhccccCCC---hHhCccHHHHHHhhC
Confidence 876443333 567999999999873
No 73
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.27 E-value=1.5e-11 Score=95.08 Aligned_cols=67 Identities=24% Similarity=0.383 Sum_probs=58.3
Q ss_pred cCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 8 GNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 8 ~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
...|+++++++++|+++|++|+.+ .++.......++|.+.||.|+||+|++++..|+||.||++||+
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~-~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEI-LVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEE-EeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 356899999999999999999996 7766444467899999999999999986669999999999984
No 74
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.26 E-value=1.5e-11 Score=97.52 Aligned_cols=69 Identities=23% Similarity=0.237 Sum_probs=55.9
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCC-CCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccC
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVT-NKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~-~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~ 79 (422)
+.||+|++++++|.++|++|+.+ .++.... ...+++ +.+|.|+||+|++++| .|+||.||++||++.++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~-~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTV-PVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEE-EecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 56999999999999999999986 6664322 222344 7899999999998745 99999999999998653
No 75
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.25 E-value=2.7e-11 Score=103.27 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc--CCccccCCCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~iTlADI~l~~~L 167 (422)
++|+.+.|+++++ .+...+...+.. ++..+...+.+...|+.||++|.+ ++||+|+++|+|||++++.+
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~ 72 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLGA--------PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWF 72 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHhc--------cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHH
Confidence 5899999999997 444444433321 334567888999999999999986 79999999999999999998
Q ss_pred HHHhhhccC---ccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 168 TLGFSRILS---KSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 168 ~~~~~~~~~---~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
.++...... ....+.||+|.+|+++|.++|.++.++.+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 73 ERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 765433211 1125789999999999999999999987654
No 76
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.25 E-value=6.5e-11 Score=110.74 Aligned_cols=187 Identities=18% Similarity=0.145 Sum_probs=118.3
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCC--
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD-- 80 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~-- 80 (422)
++||.|..||+|.+||..|.|.|++|.++ +++. - ...-.+-+.+.|||+|...+..+.||.+|+.-|+.....
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VV-EVnp---V-~r~eIk~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVV-EVNP---V-LRQEIKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEE-Eecc---h-hhhhccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 58999999999999999999999999997 6653 1 111122346889999988633899999998877442100
Q ss_pred C------CCCC-----------------------------CCHHHHHHHHHHHHHHhccchhhHHhhhccccc-------
Q 014592 81 N------PLLG-----------------------------SSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVG------- 118 (422)
Q Consensus 81 ~------~L~g-----------------------------~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g------- 118 (422)
. ..+| .+.+....-+.|-+|+++.+...+..-++...+
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFe 245 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFE 245 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHH
Confidence 0 0111 111122344678888877665544322222111
Q ss_pred ------c----cCCC----------------------HHHHHHHHHHHHHHHHHHHHhh-ccCCccccCCCCHHHHHHHH
Q 014592 119 ------F----AVYL----------------------PQAEEAAIASLKRALAALNTHL-ASNTYLVGHSVTLADIIMTC 165 (422)
Q Consensus 119 ------~----~~~~----------------------~~~~~~~~~~l~~~L~~Le~~L-~~~tfLvGe~iTlADI~l~~ 165 (422)
. .+.- +......++.+-.+++..-..| .+++||.|.+++|||+++++
T Consensus 246 wf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfG 325 (370)
T KOG3029|consen 246 WFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFG 325 (370)
T ss_pred HHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhh
Confidence 0 0000 1112234555666666666666 57899999999999999999
Q ss_pred HHHHHhhhccCccccccCccHHHHHHHHhc
Q 014592 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (422)
Q Consensus 166 ~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~ 195 (422)
.|..........+ .-...+|..|+.+|.+
T Consensus 326 vl~sm~gc~afkd-~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 326 VLRSMEGCQAFKD-CLQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhHhhhhhHHHH-HHhcchHHHHHHHHHH
Confidence 9986554422222 2234688899988874
No 77
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.24 E-value=7.9e-11 Score=99.92 Aligned_cols=113 Identities=11% Similarity=0.193 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~ 169 (422)
+++.|++.++.+.+ +......++.. +..+...+.....+.+.+..||++|.+++||+|+++|+|||++++.+.+
T Consensus 2 e~~~id~~~~~~~d-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~ 75 (121)
T cd03209 2 ERIRVDMLEQQAMD-LRMGLARICYS-----PDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQ 75 (121)
T ss_pred chHHHHHHHHHHHH-HHHHHHHhhcC-----cchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHH
Confidence 46788888776654 33333333221 1113455667788999999999999999999999999999999999877
Q ss_pred HhhhccCccccccCccHHHHHHHHhcCchhHHHhhcccccc
Q 014592 170 GFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (422)
Q Consensus 170 ~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~~ 210 (422)
+... .......||+|.+|+++|.++|.+++++.+.+...
T Consensus 76 ~~~~--~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 76 HRIF--EPDCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHHh--CccccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 6432 22235789999999999999999999998876553
No 78
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.24 E-value=3.4e-11 Score=90.28 Aligned_cols=71 Identities=37% Similarity=0.493 Sum_probs=60.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+++.||+|++++++++++|++|+.+ .++.... ...++.+.+|.+++|+|+.++..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~~~~-~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELV-PVDLGEG-EQEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEE-EeCCCCC-CCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999986 6654222 22258889999999999998669999999999984
No 79
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.23 E-value=4.2e-11 Score=93.17 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=59.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcC---Ce-eeecHHHHHHHHhhc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETP---DG-PIFESNAIARYVARL 77 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~---dg-~l~ES~AIa~YL~~~ 77 (422)
++||+++.||+|++++++|.+.|++|+.+ .++. .. ..+ +..+|.++||+|+.+ +| +|+||.+|++||++.
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~-~~~~--~~-~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~ 75 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVV-EVNP--VS-RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTY 75 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEE-ECCc--hh-HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHH
Confidence 68999999999999999999999999986 5543 11 223 467999999999976 57 999999999999874
No 80
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.4e-10 Score=101.86 Aligned_cols=186 Identities=18% Similarity=0.237 Sum_probs=121.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~ 81 (422)
|+||.|..||+|-++|+++-++|+|++.. ......+..+ ..+--..+||+|+-.|| .+-||..|.+|+.+..+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~-vL~nDDe~Tp---~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELH-VLLNDDEETP---IRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhh-eeccCcccCh---hhhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 48999999999999999999999999985 4433221111 12333568999999999 9999999999999976543
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhH----Hhhhccccc---------------ccCC--CHHHHHHHHHHHHHHHHH
Q 014592 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNI----LRWFIPRVG---------------FAVY--LPQAEEAAIASLKRALAA 140 (422)
Q Consensus 82 ~L~g~~~~e~a~v~~wl~~~~~~l~~~~----~~~~~~~~g---------------~~~~--~~~~~~~~~~~l~~~L~~ 140 (422)
-|-+.- +..+..|+.-++.-+.-.. ...-.+-+. ...+ .-........++...|..
T Consensus 77 ~lt~~~---~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~ 153 (215)
T COG2999 77 LLTGKV---RPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRA 153 (215)
T ss_pred hhccCc---CHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHH
Confidence 344432 3456677766654322221 111111110 0000 012233455677778888
Q ss_pred HHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhH
Q 014592 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFR 200 (422)
Q Consensus 141 Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k 200 (422)
|+..+...+-+-| .++.-||.+|+.|.. +..+.+-.|. ..|..|..+|+++.++.
T Consensus 154 l~~Li~~~s~~n~-~l~~ddi~vFplLRn-lt~v~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 154 LDKLIVGPSAVNG-ELSEDDILVFPLLRN-LTLVAGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHhcCcchhcc-ccchhhhhhhHHhcc-ceecccCCCc---HHHHHHHHHHHHhhCcc
Confidence 8887776663334 599999999999854 4444454443 47889999999876654
No 81
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.22 E-value=4.1e-11 Score=92.95 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=57.2
Q ss_pred eEEEecC-------CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGN-------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~-------~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+++ .||+|++++++|.++|++|+.+ .++. .+.+|.|+||+|++++.+|+||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~-~~~~---------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENK-FGGL---------AKRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEe-ecCc---------ccCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 5899988 5799999999999999999986 5542 268999999999987559999999999999
Q ss_pred hcc
Q 014592 76 RLK 78 (422)
Q Consensus 76 ~~~ 78 (422)
+++
T Consensus 72 ~~~ 74 (75)
T cd03080 72 EKY 74 (75)
T ss_pred HHc
Confidence 864
No 82
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.21 E-value=6.1e-11 Score=100.64 Aligned_cols=106 Identities=11% Similarity=0.176 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhc---cCCccccCCCCHHHHHH
Q 014592 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA---SNTYLVGHSVTLADIIM 163 (422)
Q Consensus 87 ~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~---~~tfLvGe~iTlADI~l 163 (422)
++..+|+|+||+.|... +. ..++.+.+... ..+.+.+.++.||++|. +++|++| ++|+|||++
T Consensus 1 d~~~ra~~~~~~~~~~~-~~---~~~~~~~~~~~---------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l 66 (120)
T cd03203 1 DPAKREFADELLAYTDA-FT---KALYSSLIKGD---------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAY 66 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HH---HHHHHHHhcCC---------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHH
Confidence 46789999999999321 11 11222222111 12245667788888886 4899999 999999999
Q ss_pred HHHHHHHhh---hccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 164 TCNLTLGFS---RILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 164 ~~~L~~~~~---~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
++.+.++.. ...+..+...+|+|.+|+++|.++|++++++.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 67 VPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 999876532 1123333468999999999999999999987753
No 83
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.19 E-value=7e-11 Score=98.74 Aligned_cols=79 Identities=23% Similarity=0.290 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhccC----------CccccCCCCHHHHHHHHHHHHHhhhccCccc--cccCccHHH
Q 014592 121 VYLPQAEEAAIASLKRALAALNTHLASN----------TYLVGHSVTLADIIMTCNLTLGFSRILSKSF--TSEFPHIER 188 (422)
Q Consensus 121 ~~~~~~~~~~~~~l~~~L~~Le~~L~~~----------tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~--~~~~P~L~r 188 (422)
+-|...++.....+.+.|..||++|.++ +||+|+++|+|||++++.+.++....++... +..||+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 4467788899999999999999999875 4999999999999999999887654444321 468999999
Q ss_pred HHHHHhcCchh
Q 014592 189 YFWTMVNIPNF 199 (422)
Q Consensus 189 w~~tv~~~P~~ 199 (422)
|+++|.++|+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 84
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.19 E-value=8e-11 Score=94.96 Aligned_cols=74 Identities=27% Similarity=0.315 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCc
Q 014592 123 LPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIP 197 (422)
Q Consensus 123 ~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P 197 (422)
++...+.....+.+.|..+|++|.+++||+|+++|+|||++++.+.++........ .+.||+|.+|+++|.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 45577888899999999999999999999999999999999999998877655432 489999999999999987
No 85
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.18 E-value=2.8e-10 Score=97.31 Aligned_cols=118 Identities=15% Similarity=0.240 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc---CCccccCCCCHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS---NTYLVGHSVTLADIIMTCN 166 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~---~tfLvGe~iTlADI~l~~~ 166 (422)
+++.|++.++.+. ++.......++.. .+...+.....+.+.|..||++|++ ++||+|+++|+|||++++.
T Consensus 3 e~~~vd~~~~~~~-d~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~ 75 (126)
T cd03210 3 EAALIDMVNDGVE-DLRLKYVRMIYQN------YEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDL 75 (126)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcCc------HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHH
Confidence 5677887776664 4444433333211 1334456677789999999999984 5899999999999999999
Q ss_pred HHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhccccccCCCCCCC
Q 014592 167 LTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAESVPPVQS 217 (422)
Q Consensus 167 L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~~~~~~~~~~~ 217 (422)
+.++... .......||+|.+|+++|.++|.|++++....... .+..+|
T Consensus 76 ~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~~~~-~~~~~~ 123 (126)
T cd03210 76 LDIHLVL--APGCLDAFPLLKAFVERLSARPKLKAYLESDAFKN-RPINGN 123 (126)
T ss_pred HHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcCCCC-CCCCCC
Confidence 8776432 12235789999999999999999999998876653 333333
No 86
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.17 E-value=1.3e-10 Score=97.62 Aligned_cols=109 Identities=15% Similarity=0.039 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHhccchhhHHhhhccc-ccccCCCHHHHHHHHHHHHHHHHHHHHhhc-cCCccccCCCCHHHHHHHHH
Q 014592 89 IDSAHIEQWIDFSSLEIDTNILRWFIPR-VGFAVYLPQAEEAAIASLKRALAALNTHLA-SNTYLVGHSVTLADIIMTCN 166 (422)
Q Consensus 89 ~e~a~v~~wl~~~~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~-~~tfLvGe~iTlADI~l~~~ 166 (422)
.+++++.+|+.|+.+++.+......+.. +.. .......+.+...+.+.+..||.+|. +++||+| ++|+||+++++.
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~ 79 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALM 79 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHH
Confidence 4789999999999999887622111011 111 11113446778888999999999995 5589999 599999999999
Q ss_pred HHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhh
Q 014592 167 LTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (422)
Q Consensus 167 L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~ 204 (422)
+.++....++- . |++.+|+++|.++|+|++++.
T Consensus 80 ~~~~~~~g~~l---~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRLVLNGDPV---P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHcCCCC---C--HHHHHHHHHHHCCHHHHHHHh
Confidence 98876665442 2 999999999999999999874
No 87
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=9.5e-11 Score=108.60 Aligned_cols=192 Identities=22% Similarity=0.231 Sum_probs=137.6
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCC----eEEEEec--cCCCCCC---------C-----------------hhHhhhCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVN----VELVKNF--EMGVTNK---------T-----------------PEFLKMNP 50 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~----~~~~~~~--~~~~~~~---------~-----------------~~f~~~~P 50 (422)
+-||..-.||++.+.+++.+++|++ +.++ .. +-.++.. + +-+....|
T Consensus 38 yhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v-~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p 116 (319)
T KOG2903|consen 38 YHLYVSLACPWAHRTLIVRALKGLEPAIGVSVV-HWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASP 116 (319)
T ss_pred EEEEEeccCcHHHHHHHHHHHcCccccceeEEe-ccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCC
Confidence 4689888999999999999999996 2222 11 1011100 0 00111223
Q ss_pred C--C--cccEEEcCCe---eeecHHHHHHHHhhc---------cCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhc
Q 014592 51 I--G--KVPVLETPDG---PIFESNAIARYVARL---------KADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFI 114 (422)
Q Consensus 51 ~--g--kVPvL~~~dg---~l~ES~AIa~YL~~~---------~~~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~ 114 (422)
. | .||||-+-.- +-.||..|++.+-+. .+.-.|+|.. .+++|+.|.+|+...+...+...-+
T Consensus 117 ~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GF 194 (319)
T KOG2903|consen 117 NYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGF 194 (319)
T ss_pred CCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeeecc
Confidence 1 2 4999977644 678999999999832 2334577755 5899999999998877776544333
Q ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCC--ccccCCCCHHHHHHHHHHHHHhhh---cc---CccccccCccH
Q 014592 115 PRVGFAVYLPQAEEAAIASLKRALAALNTHLASNT--YLVGHSVTLADIIMTCNLTLGFSR---IL---SKSFTSEFPHI 186 (422)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~t--fLvGe~iTlADI~l~~~L~~~~~~---~~---~~~~~~~~P~L 186 (422)
. .+++..+.+..++-+.|+.+|.+|+.+- |++|+++|.|||.+++++.+.-.. .+ -..+|..||+|
T Consensus 195 A------~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l 268 (319)
T KOG2903|consen 195 A------EKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNL 268 (319)
T ss_pred c------cccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHH
Confidence 2 3567788889999999999999999876 999999999999999998764322 11 23358899999
Q ss_pred HHHHHHHhc-CchhHHHh
Q 014592 187 ERYFWTMVN-IPNFRKIL 203 (422)
Q Consensus 187 ~rw~~tv~~-~P~~k~v~ 203 (422)
..|...+.. .|.|....
T Consensus 269 ~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 269 HNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred HHHHHHHHhhccchhhcc
Confidence 999999987 78887654
No 88
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.15 E-value=2.3e-10 Score=98.65 Aligned_cols=84 Identities=21% Similarity=0.210 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhcc----------------CCccccCCCCHHHHHHHHHHHHHhhh---ccCccccccC
Q 014592 123 LPQAEEAAIASLKRALAALNTHLAS----------------NTYLVGHSVTLADIIMTCNLTLGFSR---ILSKSFTSEF 183 (422)
Q Consensus 123 ~~~~~~~~~~~l~~~L~~Le~~L~~----------------~tfLvGe~iTlADI~l~~~L~~~~~~---~~~~~~~~~~ 183 (422)
++...+...+.+...|+.||.+|.+ ++||+|+++|+|||.+++.+.++... ..+......|
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~ 102 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADL 102 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccC
Confidence 4566788888999999999999987 68999999999999999998765321 1232334789
Q ss_pred ccHHHHHHHHhcCchhHHHhhcc
Q 014592 184 PHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 184 P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
|+|.+|+++|.++|+|+.++...
T Consensus 103 P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 103 TGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred HHHHHHHHHHHCCHHHHHHcCCH
Confidence 99999999999999999987654
No 89
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.14 E-value=1.6e-10 Score=87.91 Aligned_cols=68 Identities=29% Similarity=0.312 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHH
Q 014592 125 QAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWT 192 (422)
Q Consensus 125 ~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~t 192 (422)
...+.+.+++.+.|+.||++|+.++||+|+++|+|||++++.+.++.....+..+.+.+|+|.+|+++
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45688899999999999999999999999999999999999999887765555567899999999986
No 90
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.13 E-value=2e-10 Score=92.55 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=78.2
Q ss_pred HHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhc
Q 014592 95 EQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRI 174 (422)
Q Consensus 95 ~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~ 174 (422)
++|++|++..+.+.....+.+........+...+...+.+.+.++.||++|+++.|++|+++|+|||.+++.+.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 57888888888777665554433222345677888899999999999999999999999999999999999998876654
Q ss_pred cCccccccCccHHHHHHHH
Q 014592 175 LSKSFTSEFPHIERYFWTM 193 (422)
Q Consensus 175 ~~~~~~~~~P~L~rw~~tv 193 (422)
....+...+|+|.+|+++|
T Consensus 82 ~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred hhhhhhccCccHHHHHHhC
Confidence 3322357899999999875
No 91
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.11 E-value=7.8e-11 Score=96.30 Aligned_cols=95 Identities=28% Similarity=0.368 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCC--ccccCCCCHHHHHHHH
Q 014592 88 LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNT--YLVGHSVTLADIIMTC 165 (422)
Q Consensus 88 ~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~t--fLvGe~iTlADI~l~~ 165 (422)
+...++|++|++|.. .+..........+...+...+.+.+.|..||++|+.++ ||+|+++|+||+++++
T Consensus 3 ~~~~a~i~~W~~f~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~ 73 (99)
T PF14497_consen 3 PYWRALIDRWLDFSV---------AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFG 73 (99)
T ss_dssp -TTHHHHHHHHH-GH---------CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHH
T ss_pred hHHHHHHHHHHhccc---------hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHH
Confidence 456788999999661 11111111111234557788899999999999999988 9999999999999999
Q ss_pred HHHHHhhhccCccccccCccHHHHHHHHhc
Q 014592 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (422)
Q Consensus 166 ~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~ 195 (422)
.|..+... .+.+.||||.+|+++|.+
T Consensus 74 ~l~~~~~~----~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 74 FLASLRWA----DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHCC----HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHhhc----ccccccHHHHHHHHhhcC
Confidence 98654421 222689999999999974
No 92
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.06 E-value=1.1e-09 Score=95.12 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHH-H-HHHHHHHHHHHHHHHHHhhc--cCCccccCCCCHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQ-A-EEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMTC 165 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~iTlADI~l~~ 165 (422)
+++.|++.++.+.+-+ .....+++. .+..+. . .+-..+.+.+.|+.||++|. +++||+|+++|+|||++++
T Consensus 3 e~a~iD~i~~~v~D~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~ 77 (137)
T cd03208 3 ERALIDMYVEGTADLM-EMILMLPFL----PPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLE 77 (137)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHccC----ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHH
Confidence 5778888777665433 222222221 111111 1 12233456789999999998 6789999999999999999
Q ss_pred HHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhccc
Q 014592 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (422)
Q Consensus 166 ~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~~ 207 (422)
.+.++... .......||+|.+|+++|.++|.+++++....
T Consensus 78 ~l~~~~~~--~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 78 AILMVEEL--DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHHHHHh--chhhhccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 99876432 22335789999999999999999999997653
No 93
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.03 E-value=9.4e-10 Score=84.47 Aligned_cols=63 Identities=24% Similarity=0.276 Sum_probs=54.5
Q ss_pred EEEecC-------CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 4 VLHAGN-------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 4 tLy~~~-------~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+||.++ .||+|++++++++++|++|+.+ .++.. ..+|.|+||+|+.++..++||.+|++||++
T Consensus 2 ~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~-~~~~~---------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~ 71 (72)
T cd03054 2 ELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVV-FSSNP---------WRSPTGKLPFLELNGEKIADSEKIIEYLKK 71 (72)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEE-ecCCc---------ccCCCcccCEEEECCEEEcCHHHHHHHHhh
Confidence 678776 7999999999999999999987 55431 278999999999876699999999999976
No 94
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.00 E-value=1.6e-09 Score=92.22 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHhhcc-CCccccCCCCHHHHHHHHHHHHHhhh-c--cCccccccCccHHHHHHHHhcCchhHHHh
Q 014592 128 EAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTCNLTLGFSR-I--LSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (422)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L~~-~tfLvGe~iTlADI~l~~~L~~~~~~-~--~~~~~~~~~P~L~rw~~tv~~~P~~k~v~ 203 (422)
+++.+.+.+.|..||.+|.+ ++||+|+++|+|||++++.+.++... . .+-.....+|+|.+|+++|.++|+|+.++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 56677899999999999985 79999999999999999987655322 1 12112478999999999999999999987
Q ss_pred hcc
Q 014592 204 GEI 206 (422)
Q Consensus 204 ~~~ 206 (422)
...
T Consensus 109 ~~~ 111 (121)
T cd03201 109 AEK 111 (121)
T ss_pred CCH
Confidence 643
No 95
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.97 E-value=1.6e-09 Score=89.01 Aligned_cols=100 Identities=17% Similarity=0.300 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc--CCccccCCCCHHHHHHHHHH
Q 014592 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTLADIIMTCNL 167 (422)
Q Consensus 90 e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~iTlADI~l~~~L 167 (422)
++++|+.|++.+ +++.......+++..+ .++.+...+...+.+.+.+..||++|.+ ++|++|+++|+|||++++.+
T Consensus 2 e~~~v~~~~~~~-~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~ 79 (104)
T cd03192 2 EAARVDALVDTI-ADLRAEFAKYFYEKDG-EEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVL 79 (104)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHhhcCch-HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHH
Confidence 478899999885 5666666555554321 1224666777888899999999999987 89999999999999999999
Q ss_pred HHHhhhccCccc-cccCccHHHHHHHH
Q 014592 168 TLGFSRILSKSF-TSEFPHIERYFWTM 193 (422)
Q Consensus 168 ~~~~~~~~~~~~-~~~~P~L~rw~~tv 193 (422)
.++... +... ...||+|.+|++++
T Consensus 80 ~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 80 DYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhh--CchhhHHhChhHHHHHHhC
Confidence 876433 2232 67899999999875
No 96
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.95 E-value=5.7e-09 Score=87.76 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=65.2
Q ss_pred HHHHHHHhccchhhHHhhhccccccc---CCCHHHHHHHHHHHHHHHHHHHHhh---ccCCccccCCCCHHHHHHHHHHH
Q 014592 95 EQWIDFSSLEIDTNILRWFIPRVGFA---VYLPQAEEAAIASLKRALAALNTHL---ASNTYLVGHSVTLADIIMTCNLT 168 (422)
Q Consensus 95 ~~wl~~~~~~l~~~~~~~~~~~~g~~---~~~~~~~~~~~~~l~~~L~~Le~~L---~~~tfLvGe~iTlADI~l~~~L~ 168 (422)
+.|..+.++++...+..++.+..... ...+...+.....+.+.+..+|.+| .+++||+|+ +|+|||++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~ 82 (114)
T cd03194 4 RAWARSAAAEMHSGFAALRSECPMNLRARVPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVT 82 (114)
T ss_pred hHHHHHHHHHHHCcHHHHHHhCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHH
Confidence 34444555555555554444322110 0011122333344444555555544 567999999 9999999999988
Q ss_pred HHhhhccCccccccCccHHHHHHHHhcCchhHHHhh
Q 014592 169 LGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (422)
Q Consensus 169 ~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~ 204 (422)
++.....+ ..|+|.+|+++|.++|.|++.+.
T Consensus 83 ~~~~~~~~-----~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 83 RFRTYGLP-----LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHh
Confidence 77543222 13999999999999999998864
No 97
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.92 E-value=3.9e-09 Score=86.01 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=70.9
Q ss_pred HHHHHHHhccchhhHHhhhc-ccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhh
Q 014592 95 EQWIDFSSLEIDTNILRWFI-PRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSR 173 (422)
Q Consensus 95 ~~wl~~~~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~ 173 (422)
.+|+.+.++.+...+..... ........++...+.....+.+.|..||++|++++| +++|+|||++++.+.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~ 78 (98)
T cd03205 2 LRLEALADGILDAAVAIVYERRLRPEEKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFR 78 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcHhhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhH
Confidence 45666666555544422222 112234556778889999999999999999999998 89999999999999887554
Q ss_pred ccCccccccCccHHHHHHHH
Q 014592 174 ILSKSFTSEFPHIERYFWTM 193 (422)
Q Consensus 174 ~~~~~~~~~~P~L~rw~~tv 193 (422)
..+..++..||+|.+|+++|
T Consensus 79 ~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 79 HPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred ccCcchhhhChHHHHHHHhC
Confidence 44444467899999999875
No 98
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=3.3e-08 Score=88.99 Aligned_cols=177 Identities=18% Similarity=0.238 Sum_probs=130.1
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhhccCCCCCC-CCC
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLL-GSS 87 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~~~~~~~L~-g~~ 87 (422)
+.+..|..|...|+.+++||.++ .-. ..+| ++|.|+||.|..+...++|-.+|..++...- ..|- +-+
T Consensus 32 ~d~ascLAVqtfLrMcnLPf~v~-~~~------Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~--~~l~s~ls 100 (257)
T KOG3027|consen 32 PDNASCLAVQTFLRMCNLPFNVR-QRA------NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKG--VTLTSWLS 100 (257)
T ss_pred ccchhHHHHHHHHHHcCCCceee-ecC------Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhc--cchhhhhh
Confidence 45677999999999999999885 211 1222 6899999999988669999999999997742 1111 123
Q ss_pred HHHHHHHHHHHHHHhccchhhH--Hhhh---------ccccc------------------------ccCCCHHHHHHHHH
Q 014592 88 LIDSAHIEQWIDFSSLEIDTNI--LRWF---------IPRVG------------------------FAVYLPQAEEAAIA 132 (422)
Q Consensus 88 ~~e~a~v~~wl~~~~~~l~~~~--~~~~---------~~~~g------------------------~~~~~~~~~~~~~~ 132 (422)
..++|.++..++++++.+..+- ..|. .+..| ....+....+...+
T Consensus 101 E~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie 180 (257)
T KOG3027|consen 101 EDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIE 180 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHH
Confidence 4468888888888876443321 1110 01111 12344566678889
Q ss_pred HHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCc----cccccCccHHHHHHHHhcC
Q 014592 133 SLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMVNI 196 (422)
Q Consensus 133 ~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~----~~~~~~P~L~rw~~tv~~~ 196 (422)
++...+..|...|++.+||.|+++|-+|-.+++.+..++...+.. ...+.|+||..+.+||.++
T Consensus 181 ~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 181 QVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998877765542 2367899999999998753
No 99
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.81 E-value=1.6e-08 Score=80.56 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCc----cccccCccHHHHHHHHh
Q 014592 129 AAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMV 194 (422)
Q Consensus 129 ~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~----~~~~~~P~L~rw~~tv~ 194 (422)
...+++.+.++.||++|++++|++|+++|+|||++++.+.++....++. .....+|+|.+|+++|.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 6677899999999999999999999999999999999998765432222 12467999999999873
No 100
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.78 E-value=4.8e-07 Score=86.82 Aligned_cols=175 Identities=18% Similarity=0.253 Sum_probs=124.9
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhccCCCCCCCCC-
Q 014592 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSS- 87 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~~~~~L~g~~- 87 (422)
.++-|..+.+.+++++.+.+++ +.... ...|.|++|+|++++| .++.-.-|..||.....+ -.++.+
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~--~ssN~--------~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~k-y~~d~dl 84 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVV--VSSNP--------WRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKK-YNLDADL 84 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeE--eecCC--------CCCCCCCCCeEEecCCceeccHHHHHHHHHHhccc-CCcCccH
Confidence 4788999999999999776664 21111 2578999999999998 999999999999774222 122222
Q ss_pred -HHHHHHHHHHHHHHhccchhhHHh--hhcccc------------cccCC----------------------CHHHHHHH
Q 014592 88 -LIDSAHIEQWIDFSSLEIDTNILR--WFIPRV------------GFAVY----------------------LPQAEEAA 130 (422)
Q Consensus 88 -~~e~a~v~~wl~~~~~~l~~~~~~--~~~~~~------------g~~~~----------------------~~~~~~~~ 130 (422)
..+.+++..|+++..+.+.+.+.. |+.... -.-|. ....-+..
T Consensus 85 ~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i 164 (313)
T KOG3028|consen 85 SAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQI 164 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHH
Confidence 457888999999998888776521 211000 00011 11233455
Q ss_pred HHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccc----cccCccHHHHHHHHhc
Q 014592 131 IASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSF----TSEFPHIERYFWTMVN 195 (422)
Q Consensus 131 ~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~----~~~~P~L~rw~~tv~~ 195 (422)
.....++++.|.+.|++.+|++|+++|--|..+++.+..++...+...- ...++||+|+.+++..
T Consensus 165 ~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 165 YKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 5667889999999999999999999999999999999987766543321 2238999999999885
No 101
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.75 E-value=3e-08 Score=76.55 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=47.6
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 9 ~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+.+++|.+++++|+++|++|+.+ .+.. .+ ..+|.|+||+|++++.+|+||+||+.||++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~-~~~~------~~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVR-CRAN------AE--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEE-ecCC------cc--ccCCCCcccEEEECCEEEeCHHHHHHHHhc
Confidence 35789999999999999999986 3311 11 156789999999855599999999999975
No 102
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.70 E-value=5.3e-08 Score=83.10 Aligned_cols=68 Identities=22% Similarity=0.261 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhc
Q 014592 127 EEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (422)
Q Consensus 127 ~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~ 195 (422)
.+...+.+...|+.||++|++++||+|+++|+||+++++.+.+.... .+......+|+|.+|+++|.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhc
Confidence 45777889999999999999999999999999999999999876542 122335689999999999976
No 103
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.44 E-value=5e-07 Score=78.52 Aligned_cols=72 Identities=17% Similarity=0.261 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCc----cccccCccHHHHHHHHhc
Q 014592 124 PQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMVN 195 (422)
Q Consensus 124 ~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~----~~~~~~P~L~rw~~tv~~ 195 (422)
....++..+.+.+.++.|++.|++++||+|+++|++|+++++.+..+....++. .....||||.+|+++|.+
T Consensus 59 ~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 59 TEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 345677778889999999999999999999999999999999988776433331 125689999999999985
No 104
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.39 E-value=5.5e-07 Score=91.47 Aligned_cols=162 Identities=24% Similarity=0.349 Sum_probs=105.5
Q ss_pred CceEEEecCCC-chHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHHhhcc
Q 014592 1 MPLVLHAGNTN-KNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLK 78 (422)
Q Consensus 1 Ms~tLy~~~~s-pra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL~~~~ 78 (422)
|+++|-....+ |.+..+.++|...+++...+ +. .+ .++ ++..+| .|..+..+..|.++..
T Consensus 1 ~~~~l~~n~~~ppia~~~~~~a~~~~~~~~~s--~s-------~k--------~~~-~~~~d~~~l~~a~~~~~~~~~~~ 62 (712)
T KOG1147|consen 1 MGMKLSANLEAPPIAYIAALAASAVNVDGKSS--FS-------EK--------LVD-KQFLDGRKLNGATEPVVYSAALA 62 (712)
T ss_pred CCceeecCCCCCchHHHHHHHhhcCCccCcch--hh-------hh--------hhh-hhccccccccCCccchhhhhhhc
Confidence 67777766544 44555555555555554432 11 00 111 223344 6666677777776543
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCC
Q 014592 79 A-DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVT 157 (422)
Q Consensus 79 ~-~~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iT 157 (422)
. .+.|+|.+ .++++|+.|++|+... ....+...+..|+.+|.-+|||||.++|
T Consensus 63 ~~~~~lf~~~-~d~~~vd~w~~~s~~~-------------------------~~~~~s~~~~~ld~~l~~~t~lvg~sls 116 (712)
T KOG1147|consen 63 KADPKLFGNN-IDRSQVDHWVSFSSTF-------------------------SFDEISSSLSELDKFLVLRTFLVGNSLS 116 (712)
T ss_pred ccCHhHcCCc-ccHHHHHHHHHHhhhc-------------------------chHHHHHHHHHHHhhhhHHHHhhccchh
Confidence 3 34589988 7899999999998651 1135677888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhhcc
Q 014592 158 LADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (422)
Q Consensus 158 lADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~~~ 206 (422)
+||+++++.|..--...-.....+.+-+|.||++-...++....+....
T Consensus 117 ~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~ 165 (712)
T KOG1147|consen 117 IADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVLATL 165 (712)
T ss_pred HHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHH
Confidence 9999999999752111000001346789999999666666666666544
No 105
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.37 E-value=5.6e-07 Score=77.07 Aligned_cols=70 Identities=14% Similarity=0.252 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccC----ccccccCccHHHHHHHH
Q 014592 124 PQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILS----KSFTSEFPHIERYFWTM 193 (422)
Q Consensus 124 ~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~----~~~~~~~P~L~rw~~tv 193 (422)
....++..+.+.+.|+.|++.|++++||+|+++|.||+++++.+..+...... ......||||.+|++||
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 33557788889999999999999999999999999999999998877643111 11256899999999987
No 106
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.30 E-value=1.6e-06 Score=75.75 Aligned_cols=67 Identities=18% Similarity=0.075 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHhh-ccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhc
Q 014592 128 EAAIASLKRALAALNTHL-ASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (422)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L-~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~ 195 (422)
+..++.+...++.+-+.+ .+++|++|+++|||||++++.|..+.... +..-...||+|.+|+++|.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~-~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP-AFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc-cccchhhCcCHHHHHHHHHH
Confidence 344556666666544445 45789999999999999999997664441 22015689999999999985
No 107
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.23 E-value=1.2e-05 Score=66.57 Aligned_cols=112 Identities=17% Similarity=0.063 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCccccCCCCHHHHHHHH
Q 014592 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTC 165 (422)
Q Consensus 87 ~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~iTlADI~l~~ 165 (422)
|..++|..++...+..+.+.+.-...-..+.-.........+.+...+.+++...+..|.. +++|+|+ .||||..++.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 4568999999999999988876532211111011112445677888888899999988875 6999998 8999999999
Q ss_pred HHHHHhhhccCccccccCccHHHHHHHHhcCchhHHHhh
Q 014592 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (422)
Q Consensus 166 ~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~v~~ 204 (422)
++.++..++.+.. +.+..|.+++-++|+|+..+.
T Consensus 80 ml~Rl~~~gd~vP-----~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTYGDPVP-----ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHcCCCCC-----HHHHHHHHHHHCCHHHHHHHH
Confidence 9999877654322 688999999999999998875
No 108
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.18 E-value=7e-06 Score=64.21 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=59.5
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
|.++||+.+.||+|.+++.+|+..|++|+.+ +++- .....++...+....||++..++..+.++..|..||+
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~i-di~~--~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEI-PLGN--DARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEE-ECCC--ChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 3479999999999999999999999999987 6542 2233456666778899999986669999999999985
No 109
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.14 E-value=9.9e-06 Score=62.49 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=47.6
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
.||.|.++.+.|+.+|++|+++ ... + ...+|.|++|+|+.++..+.+|..|++||.+
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~-~~~----n-----~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~ 71 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVV-PSN----N-----PWRSPTGKLPALLTSGTKISGPEKIIEYLRK 71 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEE-ecC----C-----CCCCCCCccCEEEECCEEecChHHHHHHHHH
Confidence 4799999999999999999875 211 1 1357899999999876699999999999976
No 110
>PRK10638 glutaredoxin 3; Provisional
Probab=98.01 E-value=2.1e-05 Score=62.00 Aligned_cols=74 Identities=18% Similarity=0.137 Sum_probs=60.5
Q ss_pred Cc-eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 1 Ms-~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
|+ ++||+.+.||+|.+++.+|...|++|+.+ +++.. ....+++.+.++.++||++..++..+.....+..+-.+
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~-dv~~~-~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEI-PIDGD-AAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEE-ECCCC-HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 66 79999999999999999999999999987 66531 12346778889999999998876688888888777644
No 111
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=97.80 E-value=0.00012 Score=55.99 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=57.0
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHh
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
.++||+.+.||+|.+++-+|...|++|+.+ +++- ......+........||++..++..+.++..|..||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~-~v~~--~~~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEI-PLGK--DITGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEE-ECCC--ChhHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 368999999999999999999999999886 6543 1222344445667789999887779999999999984
No 112
>PRK10329 glutaredoxin-like protein; Provisional
Probab=97.62 E-value=0.00017 Score=56.79 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=46.7
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg 62 (422)
|.++||+.+.||+|.+++.+|...||+|+.+ +++. .....+.+...+...||+++.++.
T Consensus 1 ~~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~i-di~~--~~~~~~~~~~~g~~~vPvv~i~~~ 59 (81)
T PRK10329 1 MRITIYTRNDCVQCHATKRAMESRGFDFEMI-NVDR--VPEAAETLRAQGFRQLPVVIAGDL 59 (81)
T ss_pred CEEEEEeCCCCHhHHHHHHHHHHCCCceEEE-ECCC--CHHHHHHHHHcCCCCcCEEEECCE
Confidence 6789999999999999999999999999987 6642 111223344568889999998775
No 113
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=97.52 E-value=0.0003 Score=53.89 Aligned_cols=66 Identities=8% Similarity=0.066 Sum_probs=52.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAI 70 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AI 70 (422)
++||+.+.||.|.+++.+|+..|++|+.+ ++.. .....+++.+.++.+.+|++..++..+..-..+
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~-di~~-~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~ 68 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEI-NIDI-FPERKAELEERTGSSVVPQIFFNEKLVGGLTDL 68 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEE-ECCC-CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHH
Confidence 68999999999999999999999999987 6653 123356788888999999998877665554443
No 114
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=97.52 E-value=0.00032 Score=52.83 Aligned_cols=70 Identities=19% Similarity=0.177 Sum_probs=52.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeee--ecHHHHHHHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPI--FESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l--~ES~AIa~YL 74 (422)
++||+.+.||.|++++.++...|++|..+ +++-. ....+++.+.++.+.||+|+.++..+ ++..+|..+|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~v-di~~~-~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEI-DVEKD-SAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEE-eccCC-HHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 68999999999999999999999999886 55421 11234567788999999999874355 5556665554
No 115
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=97.52 E-value=0.00034 Score=52.26 Aligned_cols=70 Identities=14% Similarity=0.075 Sum_probs=55.6
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHH
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARY 73 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~Y 73 (422)
+++||+.+.||.|++++.+++..|++|+.+ ++.... ....++...++..++|++..++..+.++..|...
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~-di~~~~-~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEI-DILEDG-ELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEE-ECCCCH-HHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 368999999999999999999999999886 554311 1345666778999999998876688888877653
No 116
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=97.47 E-value=0.00028 Score=53.04 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=49.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFE 66 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~E 66 (422)
++||+.+.||.|.+++.++...|++|..+ .++.. ....+++.+.+|.+.||+|+.++..+.+
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~-~i~~~-~~~~~~~~~~~~~~~vP~i~~~~~~i~g 63 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEV-DVDED-PEALEELKKLNGYRSVPVVVIGDEHLSG 63 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEE-eCCCC-HHHHHHHHHHcCCcccCEEEECCEEEec
Confidence 68999999999999999999999999986 66431 1223567778899999999987654433
No 117
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=97.21 E-value=0.0013 Score=50.32 Aligned_cols=71 Identities=13% Similarity=0.075 Sum_probs=54.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCC-cccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIG-KVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~g-kVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+.+.||+|.+++.+|+..|++|+.+ +++.. .....++....... .||++..++..+.+...+.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i-~i~~~-~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEI-DVDGD-PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEE-ECCCC-HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 68999999999999999999999999987 66531 11223344444444 89999988778888888877653
No 118
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.19 E-value=0.0013 Score=50.18 Aligned_cols=64 Identities=16% Similarity=0.172 Sum_probs=48.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhC-CCCcccEEEcCCe-eeecHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMN-PIGKVPVLETPDG-PIFESN 68 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~-P~gkVPvL~~~dg-~l~ES~ 68 (422)
++||+.+.||.|++++..+...|++|+.+ +++-. ......+.+.+ +...||+++.++| .+.+..
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~i-di~~~-~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWV-DIEED-EGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEE-eCcCC-HhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 68999999999999999999999999886 55421 12234445565 8899999987777 655443
No 119
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.17 E-value=0.0015 Score=51.27 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=49.6
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhh-CCCCcccEEEcCCeeee
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKM-NPIGKVPVLETPDGPIF 65 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~-~P~gkVPvL~~~dg~l~ 65 (422)
|++++|+.+.||+|.+++-+|...|++|+.+ .++........++... ++..+||++..++..+.
T Consensus 1 ~~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i-~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~ig 65 (80)
T COG0695 1 ANVTIYTKPGCPYCKRAKRLLDRKGVDYEEI-DVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVG 65 (80)
T ss_pred CCEEEEECCCCchHHHHHHHHHHcCCCcEEE-EecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEe
Confidence 6789999999999999999999999999986 6654221123345544 47899999999887444
No 120
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.03 E-value=0.0017 Score=49.51 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=44.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg 62 (422)
++||+.+.||.|.+++-+|+..|++|+.+ +++- .....+.+...+...||+++.++.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~-di~~--~~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEI-NIDE--QPEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEE-ECCC--CHHHHHHHHHcCCcccCEEEECCC
Confidence 48999999999999999999999999987 6642 222333444456778999998654
No 121
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=96.92 E-value=0.0042 Score=49.00 Aligned_cols=75 Identities=16% Similarity=0.107 Sum_probs=57.0
Q ss_pred CceEEEecCCCchHHHHHHHHHh-----cCCCeEEEEeccCCCCCCChhHhhhCC--CCcccEEEcCCeeeecHHHHHHH
Q 014592 1 MPLVLHAGNTNKNAFKALITAEY-----TGVNVELVKNFEMGVTNKTPEFLKMNP--IGKVPVLETPDGPIFESNAIARY 73 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~-----~gl~~~~~~~~~~~~~~~~~~f~~~~P--~gkVPvL~~~dg~l~ES~AIa~Y 73 (422)
|.+++|+.+.||+|.+++-+++. .|++|+.+ +++-.. ...+++..... ...||++..++..+.+...|..+
T Consensus 1 m~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~i-di~~~~-~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~ 78 (85)
T PRK11200 1 MFVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYV-DIHAEG-ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAY 78 (85)
T ss_pred CEEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEE-ECCCCh-HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHH
Confidence 78899999999999999999998 79999886 554211 11234444332 35799998866699999999999
Q ss_pred Hhhc
Q 014592 74 VARL 77 (422)
Q Consensus 74 L~~~ 77 (422)
+...
T Consensus 79 ~~~~ 82 (85)
T PRK11200 79 VKEN 82 (85)
T ss_pred HHHh
Confidence 8764
No 122
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=96.91 E-value=0.0029 Score=48.99 Aligned_cols=72 Identities=10% Similarity=0.018 Sum_probs=56.3
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
++||+.+.||+|.+++.+++..|++|+.+ +++... ....++.+......||++..++..+.+...+..+..+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~-di~~~~-~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEI-RVDGDP-ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEE-EecCCH-HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 48999999999999999999999999987 665311 1234555566678899998877788888888777654
No 123
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.52 E-value=0.01 Score=45.58 Aligned_cols=55 Identities=18% Similarity=0.363 Sum_probs=45.8
Q ss_pred CCchHHHHHHHHHhcCCC---eEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeecHHHHHHHH
Q 014592 10 TNKNAFKALITAEYTGVN---VELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYV 74 (422)
Q Consensus 10 ~spra~kv~ial~~~gl~---~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~ES~AIa~YL 74 (422)
.+|-|..+.+.++..+.+ ++++ ... + -..+|.|++|+|.+.++ .+++-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv-~s~----n-----~~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVV-PSN----N-----PWLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEE-EcC----C-----CCcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 588999999999999999 8886 221 1 13789999999999555 999999999998
No 124
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=95.90 E-value=0.042 Score=43.50 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=52.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcC-----CCeEEEEeccCCCCCCChhHhhhCCC--CcccEEEcCCeeeecHHHHHHHHh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTG-----VNVELVKNFEMGVTNKTPEFLKMNPI--GKVPVLETPDGPIFESNAIARYVA 75 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~g-----l~~~~~~~~~~~~~~~~~~f~~~~P~--gkVPvL~~~dg~l~ES~AIa~YL~ 75 (422)
++||+.+.||+|.+++-+|...+ ++|+.+ ++.... ....++....-. ..||++..++..+.++..|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~i-di~~~~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYI-DIHAEG-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEE-ECCCCH-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 48999999999999999998874 566665 443211 113345444332 589999887669999999999987
Q ss_pred hc
Q 014592 76 RL 77 (422)
Q Consensus 76 ~~ 77 (422)
+.
T Consensus 80 ~~ 81 (86)
T TIGR02183 80 EN 81 (86)
T ss_pred hc
Confidence 74
No 125
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=95.81 E-value=0.011 Score=43.20 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=44.1
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~d 61 (422)
++||+.+.||.|.+++.+|...|++|+.+ +++.. +...+++.+......+|++..++
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~-dv~~~-~~~~~~l~~~~g~~~~P~v~i~g 57 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEV-DVDED-EEAREELKELSGVRTVPQVFIDG 57 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEE-EGGGS-HHHHHHHHHHHSSSSSSEEEETT
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEc-ccccc-hhHHHHHHHHcCCCccCEEEECC
Confidence 47999999999999999999999999987 66531 12234444555778899998754
No 126
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=95.61 E-value=0.031 Score=48.13 Aligned_cols=68 Identities=24% Similarity=0.339 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchh
Q 014592 127 EEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 127 ~~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
..+..+++...|..|+..|......-| .+|+-||.+|+.|. .+..+-+-.|. |+|..|+++|+..-.|
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR-~Ltivkgi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILR-SLTIVKGIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHH-HHCTCTTS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHh-hhhhccCCcCC---HHHHHHHHHHHHHcCC
Confidence 346667888888999988886666666 89999999999985 45555565544 7999999999876544
No 127
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=95.53 E-value=0.071 Score=43.47 Aligned_cols=72 Identities=8% Similarity=-0.005 Sum_probs=52.4
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCC--CChhHhhhCCCCcccEEEcCCeeeecHHHHHHHH
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTN--KTPEFLKMNPIGKVPVLETPDGPIFESNAIARYV 74 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~--~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL 74 (422)
++++|+.+.||+|.+++-+|...|++|+.+ +++..... ....+........||.+..++..+.+...+....
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~v-did~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVH-EIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEE-EcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHHH
Confidence 469999999999999999999999999986 77632111 1123444566779999987765777766665544
No 128
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=95.51 E-value=0.077 Score=40.92 Aligned_cols=73 Identities=11% Similarity=0.034 Sum_probs=55.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCC--ChhHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNK--TPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~--~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+++|+.+.||.|.+++-++...+++|+.. .++...... ...+.+......+|++..++..+.++..|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVV-ELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEE-EEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 58999999999999999999999999886 665421100 12334455667899998776699999999888855
No 129
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=94.78 E-value=0.16 Score=39.15 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=53.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCC--eEEEEeccCCCCCCCh----hHhhhCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVN--VELVKNFEMGVTNKTP----EFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~--~~~~~~~~~~~~~~~~----~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
+++|+.+.||+|.+++-++...+++ |+.. .++.. .... .+.+......+|.+..++..+.++..+..+..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~-~v~~~--~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVV-ELDQL--SNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEE-EeeCC--CChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 3789999999999999999999998 7775 55532 1222 234455667899998876699999888888755
No 130
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=94.34 E-value=0.043 Score=51.12 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchhHH
Q 014592 135 KRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRK 201 (422)
Q Consensus 135 ~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~k~ 201 (422)
...++.|+.+|++++|.-|..++-+|+.++..+. .......++|..||+.++.++-.+..
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~-------~ep~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG-------VEPQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc-------cCcchhhhhHHHHHHHHHHHHHHHHh
Confidence 5678899999999999999999999999988874 12225678999999999988766654
No 131
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=94.26 E-value=0.14 Score=43.79 Aligned_cols=67 Identities=22% Similarity=0.308 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHHHhcCchh
Q 014592 128 EAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (422)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~tv~~~P~~ 199 (422)
.....++...|..|+..|..... ++..+|+-||.+|+.|.. +..+-+-.|. |+|.+|+++|+++-.|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~-Lt~vkgi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRN-LTLVKGLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhh-hhhhcCCCCC---HHHHHHHHHHHHHhCC
Confidence 35566778888888888855444 455799999999999854 4555554443 7999999999976543
No 132
>PHA03050 glutaredoxin; Provisional
Probab=94.10 E-value=0.27 Score=40.77 Aligned_cols=69 Identities=13% Similarity=-0.012 Sum_probs=49.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCC---CeEEEEeccCCCC--CCChhHhhhCCCCcccEEEcCCeeeecHHHHHH
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGV---NVELVKNFEMGVT--NKTPEFLKMNPIGKVPVLETPDGPIFESNAIAR 72 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl---~~~~~~~~~~~~~--~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~ 72 (422)
+++|+.+.||+|.+++-+|...|+ +|+.+ +++-... ....++.+..-...||.+..++-.+.....+..
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i-~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIV-DIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEE-ECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 589999999999999999999999 78776 5542111 113455566667789999887666666555544
No 133
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=93.09 E-value=0.45 Score=37.88 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=49.7
Q ss_pred eEEEec-----CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHH
Q 014592 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~-----~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL 74 (422)
+++|.. +.||+|.+++-+|...|++|+.+ ++... .....++.+......||++..++..|.+...+....
T Consensus 10 vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~i-dv~~~-~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 10 VVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTF-DILED-EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred EEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEE-EcCCC-HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 577765 58999999999999999999987 65421 111233444556678999987655777777776644
No 134
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=93.01 E-value=0.43 Score=38.67 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=48.5
Q ss_pred eEEEec-----CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHH
Q 014592 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~-----~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL 74 (422)
+.||.. +.||+|.+++-+|...|++|+.+ ++.- ......++...+....||.+..++..+-....+....
T Consensus 14 Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~-di~~-~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 14 VVLYMKGTPQFPQCGFSARAVQILKACGVPFAYV-NVLE-DPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred EEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEE-ECCC-CHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHH
Confidence 467754 78999999999999999999986 5532 1111233444566678999988766666666655544
No 135
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=92.48 E-value=0.19 Score=42.40 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=30.7
Q ss_pred CceEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
|++|||+.+.|..|++++..++..|++|+.+ ++
T Consensus 1 ~~itiy~~p~C~t~rka~~~L~~~gi~~~~~-~y 33 (117)
T COG1393 1 MMITIYGNPNCSTCRKALAWLEEHGIEYTFI-DY 33 (117)
T ss_pred CeEEEEeCCCChHHHHHHHHHHHcCCCcEEE-Ee
Confidence 7899999999999999999999999999986 44
No 136
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=92.27 E-value=0.47 Score=36.35 Aligned_cols=64 Identities=25% Similarity=0.310 Sum_probs=46.9
Q ss_pred Cc-eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCC---------CCCChhHhh--hCCCCcccEEEcCCe-eee
Q 014592 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV---------TNKTPEFLK--MNPIGKVPVLETPDG-PIF 65 (422)
Q Consensus 1 Ms-~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~---------~~~~~~f~~--~~P~gkVPvL~~~dg-~l~ 65 (422)
|| .+||+...||-|......++-.+++|+.+ ++.-.. ....++|-. .|-+--+|+|.++|| ++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~V-eIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFV-EITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceee-ehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 66 49999999999999999999999999987 664221 123445543 334445899999999 544
No 137
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=91.29 E-value=0.7 Score=47.57 Aligned_cols=69 Identities=14% Similarity=0.037 Sum_probs=50.8
Q ss_pred Cc-eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhh---------hCCCCcccEEEcCCeeeecHHHH
Q 014592 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLK---------MNPIGKVPVLETPDGPIFESNAI 70 (422)
Q Consensus 1 Ms-~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~---------~~P~gkVPvL~~~dg~l~ES~AI 70 (422)
|. +++|+.+.||+|.+++-+|...||+|+.+ +++- .....++.+ ......||++..++..+.+-..+
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~i-di~~--~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQI-SLDD--DVKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEE-ECCC--ChhHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHH
Confidence 55 79999999999999999999999999986 6652 111223222 24566899998877777776666
Q ss_pred HH
Q 014592 71 AR 72 (422)
Q Consensus 71 a~ 72 (422)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 54
No 138
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=91.00 E-value=0.37 Score=40.28 Aligned_cols=31 Identities=19% Similarity=0.050 Sum_probs=29.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+.+.|+.|++++-.++..|++|+.+ ++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~i-di 32 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEER-NL 32 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEE-ec
Confidence 79999999999999999999999999987 55
No 139
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=90.74 E-value=0.37 Score=41.40 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=29.7
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
+++||+.+.|+.|++++-.+...|++|+.+ ++.
T Consensus 1 mi~iY~~~~C~~C~ka~~~L~~~gi~~~~i-di~ 33 (131)
T PRK01655 1 MVTLFTSPSCTSCRKAKAWLEEHDIPFTER-NIF 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCcEEe-ecc
Confidence 189999999999999999999999999987 553
No 140
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=89.91 E-value=1.2 Score=39.10 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=50.8
Q ss_pred eEEEecC------CCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCC----CcccEEEcCCeeeecHHHHHH
Q 014592 3 LVLHAGN------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPI----GKVPVLETPDGPIFESNAIAR 72 (422)
Q Consensus 3 ~tLy~~~------~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~----gkVPvL~~~dg~l~ES~AIa~ 72 (422)
++||+.+ ..|++.+++.+|+..||+|+.+ ++++.. ...+++.+.... ..||.+..++..|.....|.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~-DVs~~~-~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDER-DVSMDS-GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEE-ECCCCH-HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 5799988 7999999999999999999986 775421 123344444332 679999887667777766666
Q ss_pred HH
Q 014592 73 YV 74 (422)
Q Consensus 73 YL 74 (422)
.-
T Consensus 80 L~ 81 (147)
T cd03031 80 LN 81 (147)
T ss_pred HH
Confidence 44
No 141
>PRK10026 arsenate reductase; Provisional
Probab=89.39 E-value=0.57 Score=40.82 Aligned_cols=33 Identities=9% Similarity=0.229 Sum_probs=30.3
Q ss_pred Cc-eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 1 Ms-~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
|+ +|||+++.|.-|++++-.|+..|++|+.+ ++
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~-d~ 34 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTII-HY 34 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEE-ee
Confidence 76 79999999999999999999999999987 54
No 142
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=89.36 E-value=0.58 Score=40.29 Aligned_cols=33 Identities=9% Similarity=-0.065 Sum_probs=29.7
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
+++||+.+.|+.|++++-.++..|++|+.+ ++.
T Consensus 1 Mi~iY~~~~C~~crkA~~~L~~~~i~~~~~-d~~ 33 (132)
T PRK13344 1 MIKIYTISSCTSCKKAKTWLNAHQLSYKEQ-NLG 33 (132)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCCeEEE-ECC
Confidence 189999999999999999999999999987 553
No 143
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=88.44 E-value=0.57 Score=39.45 Aligned_cols=46 Identities=33% Similarity=0.563 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEE-EcCCe-eeecHHHHHHHHhh
Q 014592 15 FKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVL-ETPDG-PIFESNAIARYVAR 76 (422)
Q Consensus 15 ~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL-~~~dg-~l~ES~AIa~YL~~ 76 (422)
.++-+++++..-++++. +. ....-|-| ...+| .|+|++||+|||.+
T Consensus 13 LKlalA~~~~~~~lk~~--v~--------------ed~~~~~L~~~~~gF~L~e~NAIvrYl~n 60 (122)
T PF09635_consen 13 LKLALALEYAQKDLKLE--VN--------------EDESGPLLKDKKSGFELFEPNAIVRYLAN 60 (122)
T ss_dssp HHHHHHHHH--STT--E--E---------------SS--S--EEE-S--S----HHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCeee--eC--------------CccccceeeecCCceEEecccHHHHHHHh
Confidence 46677777765555443 11 11123677 45677 99999999999987
No 144
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=87.93 E-value=0.75 Score=38.20 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=29.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
++||+.+.||.|++++-.|+..|++|+.+ ++.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAI-DIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEe-ccc
Confidence 58999999999999999999999999987 553
No 145
>PRK10853 putative reductase; Provisional
Probab=87.90 E-value=0.76 Score=38.75 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=29.1
Q ss_pred ceEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 2 s~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++|||+.+.|.-|++++-.|+..|++|+.+ ++
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~-d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFH-DY 32 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEe-eh
Confidence 189999999999999999999999999987 54
No 146
>PRK12559 transcriptional regulator Spx; Provisional
Probab=87.86 E-value=0.87 Score=39.12 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=29.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
+++|+.+.|+.|++++-.|+..|++|+.+ ++.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~-di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEK-NIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEE-Eee
Confidence 79999999999999999999999999987 553
No 147
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=87.68 E-value=2.1 Score=31.39 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=38.7
Q ss_pred eEEEecCCCchHHHHHHHHHhc-----CCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeee
Q 014592 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPI 64 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~-----gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l 64 (422)
+++|+.+.||.|.+++-+++.. ++++..+ ++ ...++....+-...+|++..++..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~i-d~-----~~~~~l~~~~~i~~vPti~i~~~~~ 63 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMI-DA-----AEFPDLADEYGVMSVPAIVINGKVE 63 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEE-Ec-----ccCHhHHHHcCCcccCEEEECCEEE
Confidence 6899999999999888777644 4555543 32 2335566666666799998876543
No 148
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=87.22 E-value=0.88 Score=37.16 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=28.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
++||+.+.|+.|++++-.|+..|++|+.+ ++.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFI-DYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEE-eec
Confidence 48999999999999999999999999987 553
No 149
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=84.88 E-value=1.4 Score=36.92 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=28.5
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+.+.||.|++++-.++..|++|+.+ ++
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di 31 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFI-DI 31 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEE-ec
Confidence 48999999999999999999999999987 55
No 150
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=83.82 E-value=1.7 Score=36.33 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=28.7
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+.+.|+.|++++-.|+..|++|+.+ ++
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~-d~ 32 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVR-DL 32 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEe-eh
Confidence 68999999999999999999999999987 54
No 151
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=83.44 E-value=1.8 Score=35.59 Aligned_cols=32 Identities=19% Similarity=0.126 Sum_probs=28.9
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEecc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~ 35 (422)
+++|+.+.|+.|++++-.|...|++|+.+ ++.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~-di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFH-DYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEE-ecc
Confidence 48999999999999999999999999987 553
No 152
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=83.08 E-value=4.8 Score=31.20 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=39.0
Q ss_pred eEEEecCCCchHHHHHHHHHhcC--CCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCC
Q 014592 3 LVLHAGNTNKNAFKALITAEYTG--VNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~g--l~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~d 61 (422)
++||+-++|+.|..+..++.... .++++. .++. ...+++..+.- -.||||..++
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~-~vDI---~~d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELE-EVDI---DEDPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEE-EEET---TTTHHHHHHSC-TSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEE-EEEC---CCCHHHHHHhc-CCCCEEEEcC
Confidence 68999999999999998888543 345554 5554 25666666654 4899999887
No 153
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=79.69 E-value=2.9 Score=35.69 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=28.8
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+++.|.-|++++-.|+..|++|+.+ ++
T Consensus 3 i~iY~~p~Cst~RKA~~~L~~~gi~~~~~-d~ 33 (126)
T TIGR01616 3 IIFYEKPGCANNARQKAALKASGHDVEVQ-DI 33 (126)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEE-ec
Confidence 68999999999999999999999999987 54
No 154
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=78.71 E-value=3.2 Score=34.61 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=28.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+.+.|.-|++++-.|+..|++|+.+ ++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~-di 31 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVV-KY 31 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEE-ec
Confidence 48999999999999999999999999987 54
No 155
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=78.55 E-value=3.2 Score=34.42 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=28.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
++||+.+.|.-|++++-.++..|++|+.+ ++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~-di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIV-EY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEE-ec
Confidence 48999999999999999999999999987 54
No 156
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=78.16 E-value=6.3 Score=26.75 Aligned_cols=55 Identities=22% Similarity=0.115 Sum_probs=35.7
Q ss_pred EEEecCCCchHHHHHHHHH-----hcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCC
Q 014592 4 VLHAGNTNKNAFKALITAE-----YTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (422)
Q Consensus 4 tLy~~~~spra~kv~ial~-----~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~d 61 (422)
.+|+...|+.|.+++..+. ..++.+..+ +.............++...+|+++..+
T Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~~~~~~ 61 (69)
T cd01659 2 VLFYAPWCPFCQALRPVLAELALLNKGVKFEAV---DVDEDPALEKELKRYGVGGVPTLVVFG 61 (69)
T ss_pred EEEECCCChhHHhhhhHHHHHHhhCCCcEEEEE---EcCCChHHhhHHHhCCCccccEEEEEe
Confidence 5677788999999988887 345555443 332222222223578889999997654
No 157
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=76.52 E-value=13 Score=28.27 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=38.1
Q ss_pred CceEEEecCCCchHHHH----HHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeee
Q 014592 1 MPLVLHAGNTNKNAFKA----LITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPI 64 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv----~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l 64 (422)
|.+.+|. +.||.|..+ .-+++..|++++++ .++ ..++ ....-...+|+|..++..+
T Consensus 1 m~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~-~v~-----~~~~-a~~~~v~~vPti~i~G~~~ 60 (76)
T TIGR00412 1 MKIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFE-KVT-----DMNE-ILEAGVTATPGVAVDGELV 60 (76)
T ss_pred CEEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEE-EeC-----CHHH-HHHcCCCcCCEEEECCEEE
Confidence 6678887 899999988 55777788888775 553 1122 3334566799999944333
No 158
>PRK10824 glutaredoxin-4; Provisional
Probab=76.44 E-value=11 Score=31.71 Aligned_cols=70 Identities=11% Similarity=0.056 Sum_probs=47.3
Q ss_pred eEEEec-----CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHHHH
Q 014592 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYV 74 (422)
Q Consensus 3 ~tLy~~-----~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~YL 74 (422)
+.+|.- +.||+|.++.-+|...|++|..+ ++.-. ..-...+...+-...||-+-.++-.|-.+..+....
T Consensus 17 Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~i-di~~d-~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 17 ILLYMKGSPKLPSCGFSAQAVQALSACGERFAYV-DILQN-PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred EEEEECCCCCCCCCchHHHHHHHHHHcCCCceEE-EecCC-HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHH
Confidence 356654 48999999999999999999876 55421 112234445566678999877666666665555543
No 159
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=74.00 E-value=6.8 Score=35.15 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhccC---CccccCC-CCHHHHHHHHHHHHHh
Q 014592 134 LKRALAALNTHLASN---TYLVGHS-VTLADIIMTCNLTLGF 171 (422)
Q Consensus 134 l~~~L~~Le~~L~~~---tfLvGe~-iTlADI~l~~~L~~~~ 171 (422)
..+.+..|++.|+.. .|+.|+. +|-+|+.+++.|.-+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 466788899999988 9999987 9999999999987543
No 160
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=69.65 E-value=21 Score=26.81 Aligned_cols=55 Identities=20% Similarity=0.118 Sum_probs=36.7
Q ss_pred eEEEecCCCchHHHHHHHHH----hcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCC
Q 014592 3 LVLHAGNTNKNAFKALITAE----YTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~----~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~d 61 (422)
++||+.+.|+.|..+.-.++ ..+..+... .++. ...++....+....+|++..++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~-~vd~---~~~~~~~~~~~v~~vPt~~~~g 61 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVE-YINV---MENPQKAMEYGIMAVPAIVING 61 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEE-EEeC---ccCHHHHHHcCCccCCEEEECC
Confidence 57999999999997765543 234445544 4544 2345555666677899998844
No 161
>PTZ00062 glutaredoxin; Provisional
Probab=67.16 E-value=21 Score=33.11 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=45.6
Q ss_pred eEEEec-----CCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeecHHHHHH
Q 014592 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIAR 72 (422)
Q Consensus 3 ~tLy~~-----~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ES~AIa~ 72 (422)
+.||.- |.||+|.++.-+|...|++|+.. ++.-. ..-...+.+.+-...||.+..++..|.+...+..
T Consensus 115 Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~-DI~~d-~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 115 ILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETY-NIFED-PDLREELKVYSNWPTYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEE-EcCCC-HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHH
Confidence 356643 57999999999999999999876 55421 1122334445556689999887656655555544
No 162
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=65.32 E-value=26 Score=26.58 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=36.9
Q ss_pred CceEEEecCCCchHHHHHH----HHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe-eeec
Q 014592 1 MPLVLHAGNTNKNAFKALI----TAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFE 66 (422)
Q Consensus 1 Ms~tLy~~~~spra~kv~i----al~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg-~l~E 66 (422)
|.++++ .++||.|..+.- ++...|+.++.. .. ...+.....-...+|+++.++. ...+
T Consensus 1 m~I~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~-~~------~~~~~~~~ygv~~vPalvIng~~~~~G 63 (76)
T PF13192_consen 1 MKIKVF-SPGCPYCPELVQLLKEAAEELGIEVEII-DI------EDFEEIEKYGVMSVPALVINGKVVFVG 63 (76)
T ss_dssp EEEEEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEE-ET------TTHHHHHHTT-SSSSEEEETTEEEEES
T ss_pred CEEEEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEE-Ec------cCHHHHHHcCCCCCCEEEECCEEEEEe
Confidence 567774 567999996654 455567777665 32 2233336677788999999877 4443
No 163
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=63.25 E-value=37 Score=27.16 Aligned_cols=67 Identities=13% Similarity=0.045 Sum_probs=42.6
Q ss_pred eEEEecCCCc------hHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCC----CCcccEEEcCCeeeecHHHHH
Q 014592 3 LVLHAGNTNK------NAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNP----IGKVPVLETPDGPIFESNAIA 71 (422)
Q Consensus 3 ~tLy~~~~sp------ra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P----~gkVPvL~~~dg~l~ES~AIa 71 (422)
++||+...++ +++.|+.+|.-.||+|+.+ +++.. .....++.+..+ ...||-+-.++-.+-+.-.+.
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~ei-DI~~d-~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~ 78 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEV-DISMN-EENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFF 78 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEE-ecCCC-HHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHH
Confidence 5788766543 3567788999999999987 77652 223345555543 367896655555555554443
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=61.20 E-value=12 Score=30.44 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=23.7
Q ss_pred CceEEEecCCCch------HHHHHHHHHhcCCCeEEEEeccC
Q 014592 1 MPLVLHAGNTNKN------AFKALITAEYTGVNVELVKNFEM 36 (422)
Q Consensus 1 Ms~tLy~~~~spr------a~kv~ial~~~gl~~~~~~~~~~ 36 (422)
|.+++|+...++. .+++..+|+..+|+|+.+ ++..
T Consensus 1 m~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~v-DIa~ 41 (99)
T PF04908_consen 1 MVIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEV-DIAM 41 (99)
T ss_dssp -SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEE-ETTT
T ss_pred CEEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEE-eCcC
Confidence 8899998775443 457889999999999987 6654
No 165
>PHA02125 thioredoxin-like protein
Probab=57.39 E-value=28 Score=26.26 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=36.3
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEc
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET 59 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~ 59 (422)
+.+|+.+.|+.|..+.-.++ ++.+... .++. ....+....+-...+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~-~vd~---~~~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYV-DVDT---DEGVELTAKHHIRSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEE-eeeC---CCCHHHHHHcCCceeCeEEC
Confidence 68899999999998876665 3445554 4443 33567777777889999983
No 166
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=56.47 E-value=38 Score=26.73 Aligned_cols=54 Identities=9% Similarity=0.042 Sum_probs=36.7
Q ss_pred eEEEecCCCchHHHHHHHHHh-----cCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe
Q 014592 3 LVLHAGNTNKNAFKALITAEY-----TGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~-----~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg 62 (422)
+.+|+.+.|++|..+.-++.. -++.+..+ +++ ..++......-..+|+++.++.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~v-d~~-----~~~e~a~~~~V~~vPt~vidG~ 74 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMI-DGA-----LFQDEVEERGIMSVPAIFLNGE 74 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEE-EhH-----hCHHHHHHcCCccCCEEEECCE
Confidence 578898999999877654432 25666665 332 3456667777778999988544
No 167
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=56.42 E-value=77 Score=26.04 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=50.4
Q ss_pred eEEEecCCCchHHHHHHHHHhcCCCeEEEEeccCCCCCCChhHhh----hCCCCcccEEEcCCeeeecHHHHHHHHhh
Q 014592 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLK----MNPIGKVPVLETPDGPIFESNAIARYVAR 76 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~gl~~~~~~~~~~~~~~~~~~f~~----~~P~gkVPvL~~~dg~l~ES~AIa~YL~~ 76 (422)
..+|.-..||+|.+++.++.-.|+.+.++ +++-. ....++.+ ..-..+||.+-.++-.+-....|..+-.+
T Consensus 16 VVifSKs~C~~c~~~k~ll~~~~v~~~vv-ELD~~--~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 16 VVIFSKSSCPYCHRAKELLSDLGVNPKVV-ELDED--EDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred EEEEECCcCchHHHHHHHHHhCCCCCEEE-EccCC--CCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHHc
Confidence 46788889999999999999999998886 66542 22333332 23344899998877677777777666543
No 168
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=56.21 E-value=6.3 Score=32.83 Aligned_cols=27 Identities=26% Similarity=0.506 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCCchhhHhhhhcCCC
Q 014592 261 KPKNPLDLLPPSKMILDEWKRLYSNTK 287 (422)
Q Consensus 261 K~k~pl~~lp~~~f~ld~~kr~ysn~~ 287 (422)
|+|.|.|.+|=-..++++||+.|-+.-
T Consensus 2 ~kk~p~d~~~wqeyd~eEFkkkfP~La 28 (128)
T PF09868_consen 2 KKKKPIDEFPWQEYDIEEFKKKFPALA 28 (128)
T ss_pred CCcCcccccchhHhhHHHHHHHhHHHH
Confidence 567899999999999999999997743
No 169
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=50.59 E-value=20 Score=29.43 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=21.8
Q ss_pred EecCCCchHHHHHHHHHhcCCCeEEEEec
Q 014592 6 HAGNTNKNAFKALITAEYTGVNVELVKNF 34 (422)
Q Consensus 6 y~~~~spra~kv~ial~~~gl~~~~~~~~ 34 (422)
|+.+.|..|++++-.++..|++|+.+ ++
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~-d~ 28 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFI-DY 28 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEE-ET
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEee-hh
Confidence 78899999999999999999999987 44
No 170
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=50.53 E-value=16 Score=30.34 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=38.8
Q ss_pred CchHHHHHHHHHhc-----CCCeEEEEeccCCCCCCChhHhhh-C-CCCcccEEEcCCe--------------eeecHHH
Q 014592 11 NKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKM-N-PIGKVPVLETPDG--------------PIFESNA 69 (422)
Q Consensus 11 spra~kv~ial~~~-----gl~~~~~~~~~~~~~~~~~~f~~~-~-P~gkVPvL~~~dg--------------~l~ES~A 69 (422)
||-|..+.-+|+.. .++++. +++. ....+..+. - -...+|+|+.++| .|+++..
T Consensus 24 Cp~c~~iEGlLa~~P~l~~~ldV~r---V~f~--RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~ 98 (112)
T PF11287_consen 24 CPHCAAIEGLLASFPDLRERLDVRR---VDFP--RPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRR 98 (112)
T ss_pred CCchHHHHhHHhhChhhhhcccEEE---eCCC--CchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHH
Confidence 66677777665542 344444 3431 112233222 1 2456899988655 4889999
Q ss_pred HHHHHhhccC
Q 014592 70 IARYVARLKA 79 (422)
Q Consensus 70 Ia~YL~~~~~ 79 (422)
|++||+++|+
T Consensus 99 I~~~La~r~g 108 (112)
T PF11287_consen 99 ILRYLAERHG 108 (112)
T ss_pred HHHHHHHHcC
Confidence 9999999875
No 171
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=44.26 E-value=3.4 Score=38.83 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHhhccCCccccCCCCHHHHHHHHHHHHHhhhccCccccccCccHHHHHHH-HhcCchhHHHhhccc
Q 014592 129 AAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWT-MVNIPNFRKILGEIK 207 (422)
Q Consensus 129 ~~~~~l~~~L~~Le~~L~~~tfLvGe~iTlADI~l~~~L~~~~~~~~~~~~~~~~P~L~rw~~t-v~~~P~~k~v~~~~~ 207 (422)
..+..+...|...+.+|...++ .+++++|+.+.+.+...........++..++++.+|+.+ ....+ .+.+++++.
T Consensus 91 ~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~ 166 (226)
T KOG0867|consen 91 KERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHH
Confidence 6667778888888888887776 789999977777766655555666678889999999998 55566 888888888
Q ss_pred ccc
Q 014592 208 QAE 210 (422)
Q Consensus 208 ~~~ 210 (422)
++.
T Consensus 167 ~~~ 169 (226)
T KOG0867|consen 167 LAS 169 (226)
T ss_pred Hhh
Confidence 887
No 172
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=42.09 E-value=93 Score=23.70 Aligned_cols=63 Identities=17% Similarity=0.376 Sum_probs=36.1
Q ss_pred cHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHHHHHHhccchhhHHhhhcccccccCCCHHHHHHHHHHHHHHHHHHHH
Q 014592 66 ESNAIARYVARLKAD--NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNT 143 (422)
Q Consensus 66 ES~AIa~YL~~~~~~--~~L~g~~~~e~a~v~~wl~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~Le~ 143 (422)
|+.-|+.++...+|. ..+.+.+ .+..|+-|.+...+. ....+...|.+
T Consensus 5 E~~~ll~~I~~aYP~~~~~f~~~~--~k~~v~~W~~~L~d~----------------------------~ye~v~~al~~ 54 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAGNFKPTD--SKETVDLWYDMLKDY----------------------------DYEIVMKALKK 54 (71)
T ss_dssp HHHHHHHHHHHHST---TT---ST--HHHHHHHHHHHHTTS-----------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcchhccchhh--HHHHHHHHHHHHHhC----------------------------CHHHHHHHHHH
Confidence 567788899888883 3455544 356788998887651 12334455666
Q ss_pred hhccCCccccCCCCHHHHH
Q 014592 144 HLASNTYLVGHSVTLADII 162 (422)
Q Consensus 144 ~L~~~tfLvGe~iTlADI~ 162 (422)
|+.+++| -||+|||.
T Consensus 55 ~i~~~kf----PPsiaeii 69 (71)
T PF11417_consen 55 HIATNKF----PPSIAEII 69 (71)
T ss_dssp HHHH-SS-------GGGG-
T ss_pred HHHhCCC----CcCHHHHh
Confidence 7777666 57888874
No 173
>PF11280 DUF3081: Protein of unknown function (DUF3081); InterPro: IPR021432 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=35.77 E-value=48 Score=25.84 Aligned_cols=35 Identities=20% Similarity=0.428 Sum_probs=26.9
Q ss_pred cCCCCcEEEEEeeccCCCccceeecch----------hhhHHHHhhhhh
Q 014592 302 YDPEGYSLWFCDYKYNDENTVSFVTLN----------KVGGFLQRMDLA 340 (422)
Q Consensus 302 ~d~~~~s~w~~~yky~~e~~~~fm~~n----------li~gf~qr~~~~ 340 (422)
-|.+||.+|.. .+..|+++|.=| ...-|++||.++
T Consensus 34 ~D~DGYtv~L~----~~~VtLtl~FHnty~~dy~~~~~~~~F~kkl~~i 78 (79)
T PF11280_consen 34 SDFDGYTVYLE----DNGVTLTLGFHNTYHLDYDQEHNYDSFLKKLKAI 78 (79)
T ss_pred ecCCCcEEEEe----CCCEEEEEEeccceecCCCCHHHHHHHHHHHHcc
Confidence 57889999984 245788888877 577888888754
No 174
>PF09679 TraQ: Type-F conjugative transfer system pilin chaperone (TraQ); InterPro: IPR014112 This entry represents TraQ, a protein that makes a specific interaction with pilin (TraA) to aid its transfer through the inner membrane during the process of F-type conjugative pilus assembly [, ].
Probab=29.12 E-value=16 Score=28.64 Aligned_cols=19 Identities=37% Similarity=1.078 Sum_probs=14.5
Q ss_pred hhhhcceeEEEeecCCCceeEEEEEE
Q 014592 340 ARKYAFGKMLIIGSEPPFKVKGLWLF 365 (422)
Q Consensus 340 ~~k~~f~~~~v~g~~~~~~i~g~~~~ 365 (422)
||||-|- =+..+|+|.|++
T Consensus 1 MRk~kf~-------lP~~DitG~wv~ 19 (93)
T PF09679_consen 1 MRKFKFS-------LPDLDITGMWVF 19 (93)
T ss_pred CCccccC-------CCCCCCccchhh
Confidence 5777663 378899999985
No 175
>TIGR02741 TraQ type-F conjugative transfer system pilin chaperone TraQ. This protein makes a specific interaction with the pilin (TraA) protein to aid its transfer through the inner membrane during the process of F-type conjugative pilus assembly.
Probab=24.89 E-value=23 Score=26.94 Aligned_cols=19 Identities=47% Similarity=1.186 Sum_probs=13.8
Q ss_pred hhhhcceeEEEeecCCCceeEEEEEE
Q 014592 340 ARKYAFGKMLIIGSEPPFKVKGLWLF 365 (422)
Q Consensus 340 ~~k~~f~~~~v~g~~~~~~i~g~~~~ 365 (422)
||||-|- =+..+|+|.|++
T Consensus 1 mrk~~f~-------lP~~DitGmwv~ 19 (80)
T TIGR02741 1 MRKFRFS-------LPEFDITGLWVF 19 (80)
T ss_pred CCccccC-------CCCCCCccchhh
Confidence 4666552 378899999986
No 176
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=24.46 E-value=60 Score=34.34 Aligned_cols=57 Identities=7% Similarity=0.004 Sum_probs=38.9
Q ss_pred eEEEecCCCchHHHHHHHHHh-----cCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeee
Q 014592 3 LVLHAGNTNKNAFKALITAEY-----TGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIF 65 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~-----~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~ 65 (422)
+++|+.+.||+|-.+.-+++. -+|..+. ++ ....+++........||.+..++..++
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~---id---~~~~~~~~~~~~v~~VP~~~i~~~~~~ 181 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTM---ID---GALFQDEVEARNIMAVPTVFLNGEEFG 181 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEE---EE---chhCHhHHHhcCCcccCEEEECCcEEE
Confidence 689999999999876655432 2333333 22 355678888888889999998765433
No 177
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=23.52 E-value=1.8e+02 Score=22.28 Aligned_cols=52 Identities=27% Similarity=0.308 Sum_probs=34.8
Q ss_pred eEEEecCCCchHHHHH-----HHHHhcCCCeEEEEeccCCCCCCChhHhhhCCCCcccEEE
Q 014592 3 LVLHAGNTNKNAFKAL-----ITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLE 58 (422)
Q Consensus 3 ~tLy~~~~spra~kv~-----ial~~~gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~ 58 (422)
++||....+|+|.++. ++-++.+-+|++. .++. ...++.......--+|+|+
T Consensus 4 L~Lyv~g~tp~S~~ai~nl~~i~e~~l~~~~~Le-VIDv---~~~P~lAe~~~ivAtPtLv 60 (72)
T cd02978 4 LRLYVAGRTPKSERALQNLKRILEELLGGPYELE-VIDV---LKQPQLAEEDKIVATPTLV 60 (72)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHhcCCcEEEE-EEEc---ccCHhHHhhCCEEEechhh
Confidence 5899987778888663 4445667788875 6665 4566666655555566664
No 178
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=23.18 E-value=1.8e+02 Score=31.19 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=38.7
Q ss_pred eEEEecCCCchHHHHHH----HHHhc-CCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCe
Q 014592 3 LVLHAGNTNKNAFKALI----TAEYT-GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (422)
Q Consensus 3 ~tLy~~~~spra~kv~i----al~~~-gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg 62 (422)
+++|..+.||+|-.+.- ++... +|..+.+ +. ...++.........||+++.++.
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i-~~-----~~~~~~~~~~~v~~vP~~~i~~~ 538 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMI-DV-----SHFPDLKDEYGIMSVPAIVVDDQ 538 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEE-EC-----cccHHHHHhCCceecCEEEECCE
Confidence 57888899999886543 34444 6777775 33 33467777777889999999876
No 179
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=21.48 E-value=74 Score=33.66 Aligned_cols=58 Identities=9% Similarity=0.037 Sum_probs=39.3
Q ss_pred eEEEecCCCchHHHHHHHHHhc-----CCCeEEEEeccCCCCCCChhHhhhCCCCcccEEEcCCeeeec
Q 014592 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFE 66 (422)
Q Consensus 3 ~tLy~~~~spra~kv~ial~~~-----gl~~~~~~~~~~~~~~~~~~f~~~~P~gkVPvL~~~dg~l~E 66 (422)
+++|..+.||+|-.+.-+++.. +|..+.+ + ....+++........||.+..++..+++
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~i---d---~~~~~~~~~~~~v~~VP~~~i~~~~~~~ 183 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMI---D---GALFQDEVEALGIQGVPAVFLNGEEFHN 183 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEE---E---chhCHHHHHhcCCcccCEEEECCcEEEe
Confidence 5889999999998776554332 3333332 2 3456777788888899999987654433
Done!