BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014593
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZJK8|TCPH_CHICK T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1
Length = 553
Score = 594 bits (1531), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/416 (68%), Positives = 344/416 (82%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MM +ILLKEGTDTSQG QLVSNINAC +A+ VR+TLGPRGMDKLI DD+G TISN
Sbjct: 1 MMPTPVILLKEGTDTSQGIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+KLLD+VHPAAK LVDIAKSQD+EVGDGTT+V LLAAEFL++ KP++E+G+HPQ
Sbjct: 61 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+IR+FR A+ A+ K+K++A S++ + +E++ LL KCAAT LSSKLI KEFF+ MVV
Sbjct: 121 IIRAFRTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVV 180
Query: 184 DAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
DAV + D +L MIGIKKV GG + DS LV GVAFKKTFSYAGFE QPKK+ +PKI LL
Sbjct: 181 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYQSPKIALL 240
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
N+ELELK+EK+NAE+R++ YQ+IVDAEWNI+YDKLDK +SGAKVVLS+L IGD+AT
Sbjct: 241 NVELELKAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHKSGAKVVLSKLPIGDVAT 300
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRD+FCAGRV EEDL R A GG++QTSVN + D+VLG CE FEE Q+G +R+N
Sbjct: 301 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSDDVLGRCELFEEIQIGGDRYNF 360
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI++
Sbjct: 361 FTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
>sp|P80313|TCPH_MOUSE T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1
Length = 544
Score = 583 bits (1503), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/416 (66%), Positives = 341/416 (81%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MM +ILLKEGTD+SQG QLVSNI+AC +A+ VR+TLGPRGMDKLI D +G TISN
Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+KLLD+VHPAAK LVDIAKSQD+EVGDGTT+V LLAAEFL++ KP++E+G+HPQ
Sbjct: 61 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+IR+FR A+ A+ K+KE+A +++ Q E++++L KCA T LSSKLI +K FFA MVV
Sbjct: 121 IIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVV 180
Query: 184 DAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
DAV + + +L MIGIKKV GG + +S LV GVAFKKTFSYAGFE QPKK+ NPKI LL
Sbjct: 181 DAVMMLDELLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALL 240
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
N+ELELK+EK+NAEIR+ YQ+IVDAEWNI+YDKL+K QSGAKV+LS+L IGD+AT
Sbjct: 241 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVAT 300
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRD+FCAGRV EEDL R A GG++QTSVN +V +VLG C+ FEE Q+G ER+N
Sbjct: 301 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGGERYNF 360
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI++
Sbjct: 361 FTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
>sp|Q99832|TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2
Length = 543
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/416 (66%), Positives = 337/416 (81%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MM +ILLKEGTD+SQG QLVSNI+AC +A+ VR+TLGPRGMDKLI D +G TISN
Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+KLLD+VHPAAK LVDIAKSQD+EVGDGTT+V LLAAEFL++ KP++E+G+HPQ
Sbjct: 61 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+IR+FR A+ A+ K+KE+A +++ E+++LL KCA T LSSKLI +K FFA MVV
Sbjct: 121 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV 180
Query: 184 DAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
DAV + D +L MIGIKKV GG + DS LV GVAFKKTFSYAGFE QPKK+ NPKI LL
Sbjct: 181 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL 240
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
N+ELELK+EK+NAEIR+ YQ+IVDAEWNI+YDKL+K SGAKVVLS+L IGD+AT
Sbjct: 241 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT 300
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRD+FCAGRV EEDL R A GG++QTSVN + +VLG C+ FEE Q+G ER+N
Sbjct: 301 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF 360
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F+GCP +T T +LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI++
Sbjct: 361 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
>sp|Q2NKZ1|TCPH_BOVIN T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=1 SV=1
Length = 543
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/416 (66%), Positives = 338/416 (81%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MM +ILLKEGTD+SQG QLVSNI+AC +A+ VR+TLGPRGMDKLI D +G TISN
Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+KLLD+VHPAAK LVDIAKSQD+EVGDGTT+V LLAAEFL++ KP++E+G+HPQ
Sbjct: 61 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+IR+FR A+ A+ K+KE+A +++ + E+++LL KCA T LSSKLI +K FFA MVV
Sbjct: 121 IIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV 180
Query: 184 DAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
DAV + D +L MIGIKKV GG + +S LV GVAFKKTFSYAGFE QPKK+ NP I LL
Sbjct: 181 DAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALL 240
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
N+ELELK+EK+NAEIR+ YQ+IVDAEWNI+YDKL+K SGAKVVLS+L IGD+AT
Sbjct: 241 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT 300
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRD+FCAGRV EEDL R A GG++QTSVN + +VLG C+ FEE Q+G ER+N
Sbjct: 301 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNF 360
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F+GCP +T TI+LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI++
Sbjct: 361 FTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
>sp|Q5R5C8|TCPH_PONAB T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1
Length = 543
Score = 579 bits (1493), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/416 (66%), Positives = 337/416 (81%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MM +ILLKEGTD+SQG QLVSNI+AC +A+ VR+TLGPRGMDKLI D +G TISN
Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+KLLD+VHPAAK LVDIAKSQD+EVGDGTT+V LLAAEFL++ KP++E+G+HPQ
Sbjct: 61 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+IR+FR A+ A+ K+KE+A +++ E+++LL KCA T LSSKLI +K FFA MVV
Sbjct: 121 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV 180
Query: 184 DAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
DAV + D +L MIGIKKV GG + DS LV GVAFKKTFSYAGFE QPKK+ NPK+ LL
Sbjct: 181 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALL 240
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
N+ELELK+EK+NAEIR+ YQ+IVDAEWNI+YDKL+K SGAKVVLS+L IGD+AT
Sbjct: 241 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT 300
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRD+FCAGRV EEDL R A GG++QTSVN + +VLG C+ FEE Q+G ER+N
Sbjct: 301 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF 360
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F+GCP +T T +LRGGA+QF+EE ERSLHDAIMIVRRA KN +VVAGGGAI++
Sbjct: 361 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
>sp|Q54ER7|TCPH_DICDI T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7
PE=3 SV=1
Length = 555
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/417 (62%), Positives = 340/417 (81%), Gaps = 3/417 (0%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
M+ M++P I+LLKEGTDTSQG QL+SNINAC A+ D VR+TLGPRGMDKLI+ + VT
Sbjct: 1 MSQMIRPPIVLLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVT 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
ISNDGAT+MKLLDIVHPAA+ LVDIAKSQDSEVGDGTT+VV+LA EFL+ AKPF+E+G+H
Sbjct: 61 ISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
PQ +IR+FR+A A QK++EL+ I+ +++ E L KCA+T+++SKLI K+FF+
Sbjct: 121 PQIIIRAFRSACELAKQKIQELSVDIKPENMRE---FLEKCASTSMNSKLIASHKQFFSK 177
Query: 181 MVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240
MVVDAV + D L+MIGIKK GG + DS + G AFK+TF YAGFEQQPK NPK+
Sbjct: 178 MVVDAVQLLDDNIDLDMIGIKKESGGGLGDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKV 237
Query: 241 LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGD 300
L LNIELELK+EK+NAEIR+SDP++YQS+V+AEW + +DKL+ SG VVLS+LAIGD
Sbjct: 238 LCLNIELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEAIHASGVNVVLSKLAIGD 297
Query: 301 LATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNER 360
LATQ+FAD+++FCAGRV ++D+ RV ATG +Q + +N++ +V+GTC+ FEE QVG +R
Sbjct: 298 LATQFFADKNMFCAGRVPDDDIRRVCRATGAAIQNTTSNIIPDVIGTCDLFEEVQVGGQR 357
Query: 361 FNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDV 417
+N+F+GC +TATI+LRGG +QFI+EAERSLHD+IMIVRRA K+ +VVAGGGAI++
Sbjct: 358 YNLFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEM 414
>sp|P87153|TCPH_SCHPO Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct7 PE=1 SV=1
Length = 558
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/416 (63%), Positives = 326/416 (78%), Gaps = 3/416 (0%)
Query: 7 PQI--ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISND 64
PQI I+LKEGTD SQG+ QL+SNINAC AV D +R+TLGP G DKL+ DD+G V ISND
Sbjct: 6 PQIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISND 65
Query: 65 GATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNL 124
GATIMKLLDIVHPAAK LVDIA++QD+EVGDGTT+VV+ A E LREA+ F+EDGV +
Sbjct: 66 GATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLI 125
Query: 125 IRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVD 184
IR +R A+ A+ K+KE+A ++ + + LL+KCA+T ++SKLI FF MVVD
Sbjct: 126 IRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVD 185
Query: 185 AVGAIGDGD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243
AV + D NMIGIKKVPGG M DS LV GVAFKKTFSYAGFEQQPK F NPKIL L
Sbjct: 186 AVLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCL 245
Query: 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLAT 303
++ELELK+EK+NAE+R+ +YQ+IVDAEW II+ KL+ V +GAKVVLS+L IGDLAT
Sbjct: 246 DVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGDLAT 305
Query: 304 QYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363
QYFADRDIFCAGRVA +DL RV A GG++Q++ +N+ ++ LGTC+ FEERQ+G +RFN+
Sbjct: 306 QYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGTCDTFEERQIGGDRFNL 365
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
F GCP +T T++LRGGADQFI E ERSLHDAIMIV+ A KN+ VVAGGGA ++
Sbjct: 366 FEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMEL 421
>sp|P54409|TCPH_TETPY T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1
Length = 558
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/421 (62%), Positives = 335/421 (79%), Gaps = 4/421 (0%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
MMQP I+LLK+GTDTSQGKAQ++SNINA ++ ++V++TLGPRGMDKLI ++G TISN
Sbjct: 1 MMQPTILLLKDGTDTSQGKAQIISNINAVQSIVEIVKTTLGPRGMDKLIEGNRGA-TISN 59
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+ LLDIVHPAAK LVDIAK+QD EVGDGTT+V LLA E L+E+K FIE+G+HPQ
Sbjct: 60 DGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQI 119
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVV 183
+ + ++ A A+ ++E + S+ +S EK+ +L KCA T+L+SKL+ KEFF+ MVV
Sbjct: 120 VTKGYKEALKLALTFLQENSYSVADKSDGEKREMLLKCAQTSLNSKLLAHYKEFFSEMVV 179
Query: 184 DAVGAIGDGDRLN--MIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241
AV + D + L+ +IGIK V GG++ DS LV GVAFKKTFSYAGFEQQPKKF NPKI
Sbjct: 180 QAVETL-DTNLLDKDLIGIKMVTGGSVTDSVLVKGVAFKKTFSYAGFEQQPKKFANPKIC 238
Query: 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDL 301
LLNIELELK+EKENAEIR+ +P Y+SIVDAEW +IY+KL K V+SGA++VLS+L IGDL
Sbjct: 239 LLNIELELKAEKENAEIRIDNPDDYKSIVDAEWELIYEKLRKIVESGAQIVLSKLPIGDL 298
Query: 302 ATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERF 361
ATQYFADR+IFCAGRV ED+ RV ATG VQT+VN + +VLGTC FEE+Q+G ER+
Sbjct: 299 ATQYFADRNIFCAGRVDAEDIKRVQKATGSIVQTTVNGLSQDVLGTCGMFEEQQIGAERY 358
Query: 362 NIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYH 421
N+F CP ++ATI+LRGGA+QFI EAERSL+DAIMIVRR K + +V GGGAI++
Sbjct: 359 NLFQDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISR 418
Query: 422 I 422
+
Sbjct: 419 L 419
>sp|O77323|TCPH_PLAF7 T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.6 PE=3 SV=1
Length = 539
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/419 (59%), Positives = 322/419 (76%), Gaps = 1/419 (0%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
M+ +M I+LLKEGTDT+QG++Q++ NINAC + D+V++TLGPRGMDKLI+ ++ VT
Sbjct: 1 MSHLMSLPIVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTERD-VT 59
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGAT+M LL+I HPAA ILVDIAKSQD EVGDGTT+VV++A E L EAK + DG+
Sbjct: 60 ITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIE 119
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I FRNA AI K+ EL+ + ++ EEK+ +L KCA T L+SKL+ KEFF
Sbjct: 120 PNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGE 179
Query: 181 MVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240
+VV+AV +GD + IGIKKV GG+ D+ L+ GVAFKKTFSYAGFEQQPKKF+NPKI
Sbjct: 180 LVVNAVYKLGDNLDKSNIGIKKVTGGSCLDTQLIYGVAFKKTFSYAGFEQQPKKFINPKI 239
Query: 241 LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGD 300
LLLN+ELELK+EKENAE+R+ +P++Y SIV AEW+II+ KL+ GA +VLS+L IGD
Sbjct: 240 LLLNVELELKAEKENAEVRIENPNEYNSIVQAEWDIIFKKLNLIKDCGANIVLSKLPIGD 299
Query: 301 LATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNER 360
+ATQ+FAD DIFCAGRV + DL R A ATG VQTS+ N+ D+VLGTC FEE Q+GNER
Sbjct: 300 IATQFFADHDIFCAGRVEDADLKRTANATGALVQTSLFNLNDDVLGTCGVFEEVQIGNER 359
Query: 361 FNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
+NIF C ++ TI+LRGGA QFIEE ERS++DAIMIV R NS +V G G+I+++
Sbjct: 360 YNIFKECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQL 418
>sp|P42943|TCPH_YEAST T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CCT7 PE=1 SV=1
Length = 550
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/412 (57%), Positives = 314/412 (76%), Gaps = 2/412 (0%)
Query: 7 PQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGA 66
P I++LKEGTD SQGK Q++SNINAC AV + ++ TLGP G D LI TISNDGA
Sbjct: 8 PTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGA 67
Query: 67 TIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIR 126
TI+KLLD+VHPAAK LVDI+++QD+EVGDGTT+V +LA E ++EAKPF+E+G+ +++
Sbjct: 68 TILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMK 127
Query: 127 SFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAV 186
+R A A++K+ ELA I + + LL +CA T +SSKLI +FF M VDAV
Sbjct: 128 GYRKAVSLAVEKINELAVDITSEK-SSGRELLERCARTAMSSKLIHNNADFFVKMCVDAV 186
Query: 187 GAIGDGDRLN-MIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245
++ D + +IGIKK+PGG M +S +NGVAFKKTFSYAGFEQQPKKF NPKIL LN+
Sbjct: 187 LSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNV 246
Query: 246 ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQY 305
ELELK+EK+NAE+R+ YQ+IVDAEW +I++KL + ++GA +VLS+L IGDLATQ+
Sbjct: 247 ELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQF 306
Query: 306 FADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFS 365
FADR+IFCAGRV+ +D+ RV A GG++Q++ +++ E LGTC FEE Q+G+ER+N+F
Sbjct: 307 FADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQ 366
Query: 366 GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDV 417
GCP +T T++LRGGA+Q I E ERSLHDAIMIV+RA +N +VAGGGA ++
Sbjct: 367 GCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEM 418
>sp|P54410|TCPH_TETTH T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena
thermophila PE=3 SV=1
Length = 353
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/354 (63%), Positives = 280/354 (79%), Gaps = 3/354 (0%)
Query: 63 NDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQ 122
NDGATI+ LLDIVHPAAK LVDIAK+QD EVGDGTT+V LLA E L+E+K FIE+G+HPQ
Sbjct: 1 NDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKYFIEEGMHPQ 60
Query: 123 NLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMV 182
+ + ++ A A+Q + E A S+ ++ EK+ +L KCA T+L+SKL+ KEFF+ +V
Sbjct: 61 IITKGYKEALKLALQFLHENAHSVADKNETEKREMLIKCAQTSLNSKLLAHYKEFFSELV 120
Query: 183 VDAVGAIGDG--DRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240
V AV + D+ ++IGIK V GG++ DSFLV+GVAFKKTFSYAGFEQQPKKF NPKI
Sbjct: 121 VQAVETLETNLLDK-DLIGIKMVTGGSVTDSFLVSGVAFKKTFSYAGFEQQPKKFNNPKI 179
Query: 241 LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGD 300
LLNIELELK+EKENAEIR+ +P Y+SIVDAEW +IY+KL K V+SGA +VLS+L IGD
Sbjct: 180 CLLNIELELKAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGD 239
Query: 301 LATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNER 360
LATQYFADR+IFCAGRV ED+ RV +TG VQT+VN + ++VLGTC FEE Q+G ER
Sbjct: 240 LATQYFADRNIFCAGRVDAEDMKRVQKSTGAIVQTTVNGLTEDVLGTCNQFEEVQIGAER 299
Query: 361 FNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+N+F CP ++ATI+LRGGA+QFI EAERSL+DAIMIVRR K + +V GGGA
Sbjct: 300 YNLFKDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGA 353
>sp|Q8SR53|TCPH_ENCCU T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi (strain
GB-M1) GN=CCT7 PE=1 SV=1
Length = 511
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/409 (46%), Positives = 269/409 (65%), Gaps = 18/409 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D +GK Q+VSN++ CT +A+ + STLGP GMDKL + + ++NDGATI+K ++I H
Sbjct: 13 DPREGKLQVVSNVDVCTKIAEFLESTLGPYGMDKLFAGKE--IVVTNDGATILKHMNIRH 70
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
P ++LV +++SQDSEVGDGTT+VV+L E L KP I+D + I
Sbjct: 71 PVGRLLVALSESQDSEVGDGTTSVVILTTEILSCLKPLIKDNFDLGCIKGCLEELRMMCI 130
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAV--GAIGDGDR 194
+ ++++ +E +L K A T ++SK I EKE+F+ M+VDAV I D +
Sbjct: 131 EHLEKMG-------MELDDEVLYKLAGTCITSKNIRHEKEYFSRMIVDAVKQAKIDDAES 183
Query: 195 LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKE 254
IG+KKV GG++ DS VNG+AF+K F+YAG+EQQPK+ LNP+IL LN+ELE KSE++
Sbjct: 184 ---IGVKKVQGGSIGDSVAVNGIAFEKCFTYAGYEQQPKRILNPRILCLNVELEWKSERD 240
Query: 255 NAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA 314
NAEIR+ +YQ +VDAEW II KLD+ + SGA VVLS L+IGD ATQYFA IFCA
Sbjct: 241 NAEIRVGGVEEYQRVVDAEWAIIRRKLDEIISSGANVVLSSLSIGDYATQYFAKHGIFCA 300
Query: 315 GRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTA- 373
GRV++EDL RV + GG++ + ++ LG C FEERQ+G R+N F G G +A
Sbjct: 301 GRVSKEDLGRVVGSCGGSI-LGATDYLEGSLGACALFEERQLGKFRYNYFEG--GGTSAC 357
Query: 374 TIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYHI 422
T++LRG + +EE RS+HDA+ +VR A + VV GGG++++ I
Sbjct: 358 TMILRGPGQEVLEEIGRSVHDAVCVVRTALRTRKVVTGGGSVEMELSRI 406
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 295 bits (755), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 256/425 (60%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++LKEGT + G+ NI A +A+ V+STLGP+GMDK++ D G V
Sbjct: 1 MATLQGTPVLILKEGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDG TI+K +D+ HPAAK+++++AK+QD+EVGDGTTT V+LA E L++A+ ++ +H
Sbjct: 61 ITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P + R +R A+ KA++ ++ +A I+ E + L K AAT ++ K + +S
Sbjct: 121 PTVIARGYRMAANKAVEILESIAMDIDV----EDEETLKKIAATAITGKHSEYALDHLSS 176
Query: 181 MVVDAVGAIGD--GDRLNM----IGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+VV+AV + + DR + I ++K GG++ D+ LVNG+ K + G PK+
Sbjct: 177 LVVEAVKRVAEKVDDRYKVDEDNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
N KI +L LE+K + +AEIR++DP Q ++ E ++ + +D+ ++GA VV
Sbjct: 234 VKNAKIAVLKAALEVKETETDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFC 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A A G + T + + LG E EER
Sbjct: 294 QKGIDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+VG+E+ GC + + TI++RGG++ ++E ERSL DAI +V+ A ++ VVAGGGA
Sbjct: 354 KVGDEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEV 418
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 259/429 (60%), Gaps = 20/429 (4%)
Query: 1 MAAMMQPQ-------IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIH 53
MA QP +I+LKEGT S G+ L +NI A A+A ++++T GP+GMDK++
Sbjct: 1 MAIQQQPMTEPVGIPVIILKEGTQRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLV 60
Query: 54 DDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKP 113
D G +TI+N+GATI+ +D+ HPAAK+LV I+K Q+ E GDGT T V+ A E L+EA+
Sbjct: 61 DSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEK 120
Query: 114 FIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGG 173
++ +HP ++ ++ A KA + ++ +A+ + +E+ L A T+L+SK +
Sbjct: 121 LLDINIHPTIIVEGYKEALRKASEVIESIAEPVSYDDVEK----LKLIAKTSLNSKAVAE 176
Query: 174 EKEFFASMVVDAVGAIGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAG 227
+++FA + V+AV + + GDR LN I I K GG++RD+ LV G+ K +
Sbjct: 177 ARDYFAELAVEAVRTVAERRGDRWYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPD 236
Query: 228 FEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQS 287
P++ N +I LL+ LE++ + + EI ++ P Q +++ + + I+ +K++K +
Sbjct: 237 M---PRRVENARIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAAT 293
Query: 288 GAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT 347
GA VV+++ I D+A + A + I RV D+ ++A ATG + T + ++ E LG
Sbjct: 294 GANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGY 353
Query: 348 CEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNST 407
E EER+VG ++ G + ++ TI+LRGG ++ ++EAERSLHDA+ +V A +
Sbjct: 354 AELVEERKVGEDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGK 413
Query: 408 VVAGGGAID 416
+VAGGGA++
Sbjct: 414 IVAGGGAVE 422
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 250/425 (58%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + I++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E L++A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + AS QK +E+ SI + + + +L K A T ++ K E+E+ A
Sbjct: 121 PSIIIKGYTLAS----QKAQEILDSIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAK 176
Query: 181 MVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + DG ++ I ++K GG +RD+ L+ GV K + G PK+
Sbjct: 177 LAVEAVKLVAEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
N KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 IENAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T++ ++ E LG E EER
Sbjct: 294 QKGIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DAI +V+ ++ ++AGGGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 SEIEL 418
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 253/425 (59%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + E+AK ++ E + +L K A T+++ K E+E+ A
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAKDVDV----EDREILKKAAVTSITGKAAEEEREYLAE 176
Query: 181 MVVDAVG----AIGDGDRLNMIGIK--KVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV +G+ ++++ IK K GG+++D+ L+ GV K + G PK+
Sbjct: 177 IAVEAVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 VEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E E+R
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQR 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DA+ +V+ ++ +VA GGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 253/425 (59%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + E+AK ++ E + +L K A T+++ K E+E+ A
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAKDVDV----EDREILKKAAVTSITGKAAEEEREYLAE 176
Query: 181 MVVDAVG----AIGDGDRLNMIGIK--KVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV +G+ ++++ IK K GG+++D+ L+ GV K + G PK+
Sbjct: 177 IAVEAVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 VEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E E+R
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQR 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DA+ +V+ ++ +VA GGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 250/417 (59%), Gaps = 13/417 (3%)
Query: 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATI 68
+I+LKEG+ + GK L NI A AV + +++T GPRGMDK++ D G +TI+NDGATI
Sbjct: 16 VIILKEGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATI 75
Query: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSF 128
+ +D+ HPAAK+LV IAK QD E DGT T V+ + E +++A+ + +HP ++ +
Sbjct: 76 LDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGY 135
Query: 129 RNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGA 188
+ A AI+ ++E++ + E +L K A T+LSSK + G +E A +VV A+
Sbjct: 136 KKAEEMAIKTIEEISTKVSVNDTE----ILRKVALTSLSSKAVAGAREHLADIVVKAITQ 191
Query: 189 IGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242
+ + GD+ L+ + I K GG++ D+ +V G+ K + G PK+ N KI L
Sbjct: 192 VAELRGDKWYVDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGM---PKRVENAKIAL 248
Query: 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLA 302
L+ LE++ + +AEIR++DP+Q + +D E NI+ +K+DK Q+GA VV+ + I ++A
Sbjct: 249 LDASLEVEKPELDAEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANVVICQKGIDEVA 308
Query: 303 TQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFN 362
Y A + I R + DL ++A ATGG V ++++ + + LG EER++G ++
Sbjct: 309 QHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGYATLVEERKIGEDKMV 368
Query: 363 IFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
G + + +I++RGG ++ ++E ER+L DA+ V ++ +AGGGA++
Sbjct: 369 FIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEI 425
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 251/422 (59%), Gaps = 19/422 (4%)
Query: 6 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDG 65
Q I++LKEGT QGK +NI A A+AD VR+TLGP+GMDK++ D G + ISNDG
Sbjct: 5 QVPILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDG 64
Query: 66 ATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLI 125
ATI+K +D+ HP AK++V+++K+QD+ VGDGTTT V+L+ E L++A+ ++ GVHP +
Sbjct: 65 ATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVIS 124
Query: 126 RSFRNASYKAIQKVKELA-KSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVD 184
+R A +A + + E+A KS + +L K A T LS K G +F A +VV
Sbjct: 125 NGYRLAVNEARKIIDEIAEKSTDDATLR-------KIALTALSGKNTGLSNDFLADLVVK 177
Query: 185 AVGAIG---DG----DRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLN 237
AV A+ DG D N I + K GG++ D+ ++G+ K ++ + P N
Sbjct: 178 AVNAVAEVRDGKTIVDTAN-IKVDKKNGGSVNDTQFISGIVIDKEKVHS---KMPDVVKN 233
Query: 238 PKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLA 297
KI L++ LE+K + A++++SDPS+ Q ++ E N ++K +SGA VVL +
Sbjct: 234 AKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKG 293
Query: 298 IGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVG 357
I D+A Y A I+ RV + D+ ++A ATG + T ++++ VLG E EER++G
Sbjct: 294 IDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIG 353
Query: 358 NERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDV 417
++R GC + + +I++RGG D + E ER+L+DAI +V ++ + GGGA++
Sbjct: 354 DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEA 413
Query: 418 RF 419
Sbjct: 414 EL 415
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 262/428 (61%), Gaps = 17/428 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MAA P +++LKEGT + G+ L +NI A +A++++S+LGPRG+DK++ D G +T
Sbjct: 1 MAATGYP-VLILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDIT 59
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
++NDGATI+K ++I HPAAK+LV++AK+QD+EVGDGTT+VV+LA L +A+ +++ +H
Sbjct: 60 VTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLH 119
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLI--GGEKEFF 178
P +I + A +A++ V E A +E E +L + A TTL+SK + G E++
Sbjct: 120 PTIIIEGYTKAMEEALRLVDEAAVPVEV----EDDSVLRRIAETTLASKFVGTGPERDKI 175
Query: 179 ASMVVDAVGAIG----DGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQ 231
SMV+DA+ + DG L+ + I+K GG++ DS LV G+ K +
Sbjct: 176 ISMVIDAIRTVAEKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAM--- 232
Query: 232 PKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKV 291
PK+ N KIL+L+ LE++ + +IR++D + +S ++ E ++ D ++K +GA V
Sbjct: 233 PKRVENAKILVLDAPLEVQKPELTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANV 292
Query: 292 VLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHF 351
V+++ I ++A + A + I RV D+ +VA ATG + TS+ ++ E LG E
Sbjct: 293 VITQKGIDEVAQHFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELV 352
Query: 352 EERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAG 411
EER+VG ++ G + ++ TI+LRG D ++EAER++ DA+ +R + +V G
Sbjct: 353 EERKVGEDKMVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGG 412
Query: 412 GGAIDVRF 419
GGA++V
Sbjct: 413 GGAVEVEL 420
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 250/417 (59%), Gaps = 13/417 (3%)
Query: 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATI 68
+I+LKEG+ + GK L +NI A A+ + ++ST GPRGMDK++ D G +TI+NDGATI
Sbjct: 15 VIILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATI 74
Query: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSF 128
+ +D+ HP K+LV IAK QD E DGT T V+LA E ++A+ + +HP ++ +
Sbjct: 75 LDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGY 134
Query: 129 RNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGA 188
+ A A++ ++E+A+ + + +L K A T+L SK + G +E+ A +VV AV
Sbjct: 135 KKAEEIALKTIQEIAQPVTINDTD----VLRKVALTSLGSKAVAGAREYLADLVVKAVAQ 190
Query: 189 IGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242
+ + GD+ L+ + I K GG++ D+ LV G+ K + G PK+ N KI L
Sbjct: 191 VAELRGDKWYVDLDNVQIVKKHGGSVNDTQLVYGIVVDKEVVHPGM---PKRIENAKIAL 247
Query: 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLA 302
L+ LE++ + +AEIR++DP+Q ++ E NI+ +K+DK +GA VV+ + I ++A
Sbjct: 248 LDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVA 307
Query: 303 TQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFN 362
Y A + I R + DL ++A ATGG V ++++ + + LG EER+VG ++
Sbjct: 308 QHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMV 367
Query: 363 IFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
G + ++ +I++RGG ++ ++E ER+L DA+ V ++ VAGGGA+++
Sbjct: 368 FVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEI 424
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 250/425 (58%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + +A+ ++ E + +L K A T ++ K E+E+ A
Sbjct: 121 PSIIIKGYALAAEKAQEILDSIARDVD----VEDREILKKAAMTAITGKAAEEEREYLAE 176
Query: 181 MVVDAVGAIGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + + GDR L+ I +K GG+++D+ L+ GV K + G K+
Sbjct: 177 IAVEAVKQVAEKVGDRYHVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMR---KR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 VEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E E+R
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQR 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DA+ +V+ ++ +VA GGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 249/417 (59%), Gaps = 13/417 (3%)
Query: 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATI 68
+I+LKEG+ + GK L +NI A A+ + ++ST GPRGMDK+ D G +TI+NDGATI
Sbjct: 15 VIILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATI 74
Query: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSF 128
+ +D+ HP K+LV IAK QD E DGT T V+LA E ++A+ + +HP ++ +
Sbjct: 75 LDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGY 134
Query: 129 RNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGA 188
+ A A++ ++++A+ + + +L K A T+L SK + G +E+ A +VV AV
Sbjct: 135 KKAEEIALKTIQDIAQPVSINDTD----VLRKVALTSLGSKAVAGAREYLADLVVKAVAQ 190
Query: 189 IGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242
+ + GD+ L+ + I K GG++ D+ LV G+ K + G PK+ N KI L
Sbjct: 191 VAELRGDKWYVDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHPGM---PKRIENAKIAL 247
Query: 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLA 302
L+ LE++ + +AEIR++DP+Q ++ E NI+ +K+DK +GA VV+ + I ++A
Sbjct: 248 LDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVA 307
Query: 303 TQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFN 362
Y A + I R + DL ++A ATGG V ++++ + + LG EER+VG ++
Sbjct: 308 QHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMV 367
Query: 363 IFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
G + ++ +I++RGG ++ ++E ER+L DA+ V ++ VAGGGA+++
Sbjct: 368 FVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEI 424
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 249/411 (60%), Gaps = 14/411 (3%)
Query: 19 SQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA 78
+ G+ L +NI A A+++++++T GP+GMDK++ D G VTI+NDGATI+ +I HPA
Sbjct: 3 TTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPA 62
Query: 79 AKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQK 138
AK+LV +AKSQDSEVGDGT V+LA E L+ A+ ++ +HP +I +R A +A++
Sbjct: 63 AKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKI 122
Query: 139 VKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD--GDR-- 194
+ ++A+ I+ + E LL K A T+L+SK + +EFFA + V AV + + GD+
Sbjct: 123 LDQMAEPIDLNNEE----LLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNY 178
Query: 195 --LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252
L+ I I K GG + DS LV G+ K + G P++ N KI+LL+ LE++
Sbjct: 179 VDLDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGM---PRRVENAKIVLLDAPLEIEKP 235
Query: 253 KENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIF 312
+ +AEIR++DP Q + + E I+ +DK GA VV+ + I ++A + A + I
Sbjct: 236 EIDAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGIL 295
Query: 313 CAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRT 372
RV DL ++ ATGG + +++ ++ E LG EER+VG ++ GC + R+
Sbjct: 296 AVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDKMVFIEGCKNPRS 355
Query: 373 ATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF-YHI 422
+IV+RGG ++ ++EAERS+ DA+ V A ++ V+ GGGA ++ HI
Sbjct: 356 VSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHI 406
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 247/425 (58%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + I++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E L++A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + +AK ++ E +L K A T ++ K E+E+ A
Sbjct: 121 PSIVIKGYMLAAEKAQEILDSIAKEVKPDDEE----VLLKAAMTAITGKAAEEEREYLAK 176
Query: 181 MVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + DG ++ I +K GG + D+ L+ GV K + G PK+
Sbjct: 177 LAVEAVKLVAEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 VEKAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T++ ++ E LG E EER
Sbjct: 294 QKGIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DA+ +V+ ++ ++AGGGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 AEIEL 418
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 278 bits (710), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 249/425 (58%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A VA+ +R+TLGP+GMDK++ D G +
Sbjct: 1 MAQLAGQPVVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+ +DI HPAAK++V++AK+QD E GDGTTT V++A E L++A+ ++ +H
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + ++ +AK + +E L K A T+++ K E+E+ A
Sbjct: 121 PSIIIKGYALAAEKAQEILEGIAKEVSPDDVE----TLKKAAVTSITGKAAEEEREYLAE 176
Query: 181 MVVDAVGAIGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + + GD+ L+ I +K G ++ ++ L+ GV K + G PK+
Sbjct: 177 IAVEAVRQVAEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGM---PKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
N KI L+N LE+K + +AEIR++ P Q Q+ ++ E ++ + +DK + GA VV
Sbjct: 234 VENAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E E+R
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQR 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
+V E GC + + TI++RGG + ++E ER+L DA+ +V+ ++ ++ GGA
Sbjct: 354 KVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 252/416 (60%), Gaps = 13/416 (3%)
Query: 8 QIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGAT 67
Q+++L EG G+ NI A VA+ VR+TLGP GMDK++ D+ G V ++NDG T
Sbjct: 10 QVLILPEGYQRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVT 69
Query: 68 IMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRS 127
I++ +DI HPAAK++V++AK+Q+ EVGDGTTT V+LA E L +A+ ++ +HP + R
Sbjct: 70 ILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARG 129
Query: 128 FRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVG 187
+R A++K +E+ + I + + + L K A T ++ K + +++ A +VV AV
Sbjct: 130 YR----MAVEKAEEILEEIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVK 185
Query: 188 AIG---DGDRL---NMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241
+ DG+ + + I ++K GG + D+ LV G+ K + G P++ N KI
Sbjct: 186 QVAEEEDGEIVIDTDHIKLEKKEGGGLEDTELVKGMVIDKERVHPGM---PRRVENAKIA 242
Query: 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDL 301
LLN +E+K + +AEIR++DP Q Q+ ++ E ++ + +DK ++GA VV + I DL
Sbjct: 243 LLNCPIEVKETETDAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDL 302
Query: 302 ATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERF 361
A Y A + I RV + D+ ++A ATG + T+++++ +E LG E EE++V ++
Sbjct: 303 AQHYLAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKM 362
Query: 362 NIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDV 417
GC + TI++RGG + ++EAER++ DAI +V A ++ VVAGGGA +V
Sbjct: 363 IFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEV 418
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 250/424 (58%), Gaps = 15/424 (3%)
Query: 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISND 64
M ++L KEGT S G+ L +NI A +A++++S+LGPRG+DK++ D G VTI+ND
Sbjct: 1 MAGPVLLFKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITND 60
Query: 65 GATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNL 124
GATI+K ++I HPAAK+LV+ AK+QD+EVGDGTT+ V+LA L +A+ +E VHP +
Sbjct: 61 GATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTII 120
Query: 125 IRSFRNASYKAIQKVKELAKSIEGQSLEEK--KRLLSKCAATTLSSKLIGG---EKEFFA 179
I ++ A KA++ + +L+ I+ L K L K +TT+SSK I G E +
Sbjct: 121 IDGYKKALTKALEIIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKII 180
Query: 180 SMVVDAVGAIG----DGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQP 232
+V+DA+ + DG L++I I K GG++ DS LV+G+ K +AG P
Sbjct: 181 DLVIDAITIVAEKRPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGM---P 237
Query: 233 KKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVV 292
++ KI +L+ LE++ + +A+I ++ P Q +S +D E + + +DK GA VV
Sbjct: 238 RRVEKAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVV 297
Query: 293 LSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFE 352
+ + I D+A + A + I RV D+ ++ A G + +S+ + E LG E E
Sbjct: 298 ICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVE 357
Query: 353 ERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412
ER++GN++ G + R I+LRG D ++EAERSL+DA+ +R +VAGG
Sbjct: 358 ERRIGNDKMVFIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGG 417
Query: 413 GAID 416
GA++
Sbjct: 418 GAVE 421
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 275 bits (703), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 249/427 (58%), Gaps = 17/427 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L+EGT + G+ NI A +A+ VRSTLGP+GMDK++ D G V
Sbjct: 1 MATLQGQPVLILREGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDG TI+K +D+ HPAAK+++++AK+QD+EVGDGTTT V+LA E L+ A+ ++ +H
Sbjct: 61 ITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEF--F 178
P + +R A+ KA++ + E+A I ++ +L K A T ++ K G E
Sbjct: 121 PAIIANGYRYAAEKALEILNEIAIPIS----KDDDEILKKIATTAMTGK--GAEVAIDKL 174
Query: 179 ASMVVDAVGAIGDGD------RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQP 232
A + V+AV I + + I I+K GG++ ++ LV+G+ K + G P
Sbjct: 175 AEIAVNAVKMIAEESNGQVEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGM---P 231
Query: 233 KKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVV 292
K+ N KILLL+ LE+K + +A+IR++DP + Q ++ E ++ + +DK V +GA VV
Sbjct: 232 KRVENAKILLLDSALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVV 291
Query: 293 LSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFE 352
+ I DLA Y A + RV + D+ ++A ATG V T + ++ E LG E
Sbjct: 292 FCQKGIDDLAQYYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVE 351
Query: 353 ERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412
ER+VG+E+ +GC + + TI++RGG + +EE R + DA+ V A ++ VV G
Sbjct: 352 ERKVGDEKMVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGA 411
Query: 413 GAIDVRF 419
GA ++
Sbjct: 412 GAPEIEV 418
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 254/417 (60%), Gaps = 13/417 (3%)
Query: 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATI 68
+I+LKEG+ + GK L NI A AV + ++ST GPRGMDK++ D G +TI+NDGATI
Sbjct: 16 VIILKEGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATI 75
Query: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSF 128
+ +D+ HPAAK+LV IAK QD E DGT T V+LA E +++A+ + +HP ++ F
Sbjct: 76 LDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGF 135
Query: 129 RNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGA 188
+ A +A++ ++E+A+ + ++ +L K A T+L+SK + G +E+ A +V AV
Sbjct: 136 KKAEEQALKTIEEIAQKVSVNDMD----ILKKVAMTSLNSKAVAGAREYLADIVAKAVTQ 191
Query: 189 IGD--GDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242
+ + GDR L+ I I K GG++ D+ ++ G+ K + G PK+ N KI L
Sbjct: 192 VAELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGM---PKRVENAKIAL 248
Query: 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLA 302
L+ LE++ + +AEIR++DP+Q + ++ E N++ +K+DK +GA VV+ + I ++A
Sbjct: 249 LDASLEVEKPELDAEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANVVICQKGIDEVA 308
Query: 303 TQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFN 362
Y A + I R + DL ++A ATGG V ++++ + + LG EER+VG ++
Sbjct: 309 QHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVGEDKMV 368
Query: 363 IFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
G + + +I++RGG ++ ++E ER+L DA+ V ++ VAGGGA+++
Sbjct: 369 FVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEI 425
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 247/426 (57%), Gaps = 14/426 (3%)
Query: 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISND 64
M ++LLKEGT + G+ L +NI A +A+++RS+LGP+G+DK++ D G VTI+ND
Sbjct: 1 MAAPVLLLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITND 60
Query: 65 GATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNL 124
GATI+K ++I HPAAK+LV+ AK+QD+EVGDGTT+ V+LA L +A+ ++ +HP +
Sbjct: 61 GATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTII 120
Query: 125 IRSFRNASYKAIQKVKELAKSIEGQSLEEK--KRLLSKCAATTLSSKLI--GGEKEFFAS 180
I ++ A KA++ + +L I+ + L + L K A TTL+SK I G E
Sbjct: 121 IEGYKKAYNKALELLPQLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIID 180
Query: 181 MVVDAVGAI-------GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 233
MV+DA+ + G L++I I K GG++ DS LV G+ K + G P+
Sbjct: 181 MVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGM---PR 237
Query: 234 KFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293
+ KI +L+ LE++ + +A+I ++ P Q ++ +D E + D +DK GA VV+
Sbjct: 238 RVTKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVI 297
Query: 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEE 353
+ I D+A + A + I RV D+ ++ A G + +S+ + E LG E EE
Sbjct: 298 CQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEE 357
Query: 354 RQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGG 413
R+VGN++ G + + I+LRG D ++EAERS++DA+ +R ++ GGG
Sbjct: 358 RRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGG 417
Query: 414 AIDVRF 419
AI++
Sbjct: 418 AIELEL 423
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 249/427 (58%), Gaps = 14/427 (3%)
Query: 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISN 63
M ++LLKEGT S G+ L +NI A +A++++S+LGPRG+DK++ D G VTI+N
Sbjct: 1 MANAPVLLLKEGTQRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITN 60
Query: 64 DGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQN 123
DGATI+K ++I HPAAK+LV+ AK+QD+EVGDGTT+ V+LA L +A ++ +HP
Sbjct: 61 DGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTI 120
Query: 124 LIRSFRNASYKAIQKVKELAKSIEGQSLEE--KKRLLSKCAATTLSSKLIGGEKEF--FA 179
+I ++ A K+++ + +LA I+ +L + L K TT+SSK I G +E
Sbjct: 121 IIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIM 180
Query: 180 SMVVDAVGAI-------GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQP 232
+MV+DAV + G L++I I K GG++ DS LV+G+ K + G P
Sbjct: 181 NMVIDAVSIVAEPLPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGM---P 237
Query: 233 KKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVV 292
++ KI +L+ LE++ + +A+I ++ P Q ++ +D E + D +DK GA VV
Sbjct: 238 RRVEKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVV 297
Query: 293 LSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFE 352
+ + I D+A + A + I RV D+ ++ A G + +S+ + E LG E E
Sbjct: 298 ICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVE 357
Query: 353 ERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412
ER+VGN++ G + + I+LRG D ++EAERS++DA+ +R +VAGG
Sbjct: 358 ERRVGNDKMVFIEGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGG 417
Query: 413 GAIDVRF 419
GA++
Sbjct: 418 GAVETEL 424
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 247/426 (57%), Gaps = 14/426 (3%)
Query: 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISND 64
M ++LLKEGT + G+ L +NI A +A+++RS+LGP+G+DK++ D G VTI+ND
Sbjct: 1 MASPVLLLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITND 60
Query: 65 GATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNL 124
GATI+K ++I HPAAK+LV+ AK+QD+EVGDGTT+ V+LA L +A+ ++ +HP +
Sbjct: 61 GATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTII 120
Query: 125 IRSFRNASYKAIQKVKELAKSIEGQSLEEK--KRLLSKCAATTLSSKLI--GGEKEFFAS 180
I ++ A KA++ + +L I+ + L + L K A TTL+SK I G E
Sbjct: 121 IEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIID 180
Query: 181 MVVDAVGAI-------GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 233
MV+DA+ + G L++I I K GG++ DS LV G+ K + G P+
Sbjct: 181 MVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGM---PR 237
Query: 234 KFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293
+ KI +L+ LE++ + +A+I ++ P Q ++ +D E + D +DK GA VV+
Sbjct: 238 RVTKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVI 297
Query: 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEE 353
+ I D+A + A + I RV D+ ++ A G + +S+ + + LG E EE
Sbjct: 298 CQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEE 357
Query: 354 RQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGG 413
R+VGN++ G + + I+LRG D ++EAERS++DA+ +R ++ GGG
Sbjct: 358 RRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGG 417
Query: 414 AIDVRF 419
AI++
Sbjct: 418 AIELEL 423
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 245/423 (57%), Gaps = 16/423 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA QP I +L + T G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQGQQP-IFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIV 59
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDG TI++ +DI HPAAK+LV++AK+Q+ EVGDGTTT V++A E L+EA+ IE GVH
Sbjct: 60 ITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVH 119
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKR-LLSKCAATTLSSKLIGGEKEFFA 179
P + +RNA+ KA + ++E+ S+E R L K A T ++ K KE A
Sbjct: 120 PTIIALGYRNAALKAQEILEEI-------SMEASDRDTLMKVAITAMTGKGSERAKEKLA 172
Query: 180 SMVVDAVGAI---GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFL 236
+VVDAV + G+ D+ N I I+++ G ++ +S +VNG+ K+ + PK+
Sbjct: 173 ELVVDAVMQVEEDGEIDKDN-INIQRIQGASVNESRIVNGIVIDKSRADTSM---PKRIE 228
Query: 237 NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRL 296
+I LL +E+K + +A+IRL+DPSQ Q+ ++ E +I D ++K SGA VV +
Sbjct: 229 KARIALLKYPIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQK 288
Query: 297 AIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQV 356
I DLA Y + I RV + D+ R+ ATG + T+++++ E LG E+++
Sbjct: 289 GIDDLALHYLSREGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKI 348
Query: 357 GNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+E C + +I+LRG EE ER+L DAI +V ++ VVAGGGA +
Sbjct: 349 FDEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPE 408
Query: 417 VRF 419
V
Sbjct: 409 VEI 411
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 268 bits (685), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 243/421 (57%), Gaps = 11/421 (2%)
Query: 3 AMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTIS 62
AM I++L + G+ NI A +A+ VR+TLGP+GMDK++ D+ G + ++
Sbjct: 2 AMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVT 61
Query: 63 NDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQ 122
NDG TI+K + + HPAAK+L+++AK+Q+ EVGDGTTT V++A E LR+A+ ++ +HP
Sbjct: 62 NDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPS 121
Query: 123 NLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMV 182
+I + A KA++++K +AK ++ + E +L K A T+++ K +E A +V
Sbjct: 122 VIINGYEMARNKAVEELKSIAKEVKPEDTE----MLKKIAMTSITGKGAEKAREQLAEIV 177
Query: 183 VDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNP 238
V+AV A+ D + ++I ++K G + ++ L+ GV K Q PKK N
Sbjct: 178 VEAVRAVVDEETGKVDKDLIKVEKKEGAPIEETKLIRGVVIDKERVNP---QMPKKVENA 234
Query: 239 KILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAI 298
KI LLN +E+K + +AEIR++DP++ ++ E +I D ++K +GA VV + I
Sbjct: 235 KIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGI 294
Query: 299 GDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN 358
DLA Y A + I RV + D+ ++A ATG + T ++++ E LG EER+V
Sbjct: 295 DDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAG 354
Query: 359 ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVR 418
+ C + TI+ RG + +EE R++ DAI +V+ A + +VAGGGA ++
Sbjct: 355 DAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIE 414
Query: 419 F 419
Sbjct: 415 L 415
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 267 bits (683), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 242/425 (56%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 VTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + E+A ++ E L K AAT+++ K KE A
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAIRVDPDDEE----TLLKIAATSITGKNAESHKELLAK 176
Query: 181 MVVDAVGAIG---DGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + DG L+ I +K G + +S LV GV K + + PK+
Sbjct: 177 LAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHP---RMPKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
N KI L+N LE+K + +A+I ++ P Q S ++ E ++ D +D Q+GA VV
Sbjct: 234 VENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E EER
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
++ E GC + + TI++RGG + I+E ER+L DA+ +V+ ++ V+ GGA
Sbjct: 354 KLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 267 bits (683), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 242/425 (56%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 VTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + + E+A ++ E L K AAT+++ K KE A
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAIRVDPDDEE----TLLKIAATSITGKNAESHKELLAK 176
Query: 181 MVVDAVGAIG---DGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ V+AV + DG L+ I +K G + +S LV GV K + + PK+
Sbjct: 177 LAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHP---RMPKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
N KI L+N LE+K + +A+I ++ P Q S ++ E ++ D +D Q+GA VV
Sbjct: 234 VENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E EER
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
++ E GC + + TI++RGG + I+E ER+L DA+ +V+ ++ V+ GGA
Sbjct: 354 KLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 265 bits (677), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 252/417 (60%), Gaps = 27/417 (6%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D G+ N+ AC AV+++V+++LGP G+DK++ DD G VTI+NDGATI+++L++ H
Sbjct: 13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEH 72
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+LV++A+ QD EVGDGTT+VV++AAE L+ A + + +HP ++I +R A
Sbjct: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA----- 127
Query: 137 QKVKELAKSIEGQSLEEKKRL----LSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDG 192
++E K IE + + + ++L L CA T++SSKLI G+ +FFA++VV+AV ++
Sbjct: 128 --MRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMT 185
Query: 193 DR-------LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245
++ + I I K G + RDS+L+NG A + G P + KI L+
Sbjct: 186 NQRGEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAAQGM---PLRVSPAKIACLDF 242
Query: 246 ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQY 305
L+ + ++ ++DP + + I E ++ ++++K +++GA V+L+ I D+A +Y
Sbjct: 243 NLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKY 302
Query: 306 FADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEV------LGTCEHFEERQVGNE 359
F + RV +ED+ VA ATG T+ T+ ++ E LG+ + E ++ ++
Sbjct: 303 FVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADD 362
Query: 360 RFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ G + +++LRG D ++E ER+LHDA+ IV+R +++TVVAGGGA++
Sbjct: 363 DVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVE 419
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 264 bits (675), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 242/421 (57%), Gaps = 12/421 (2%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA QP I++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQGQQP-ILVLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIV 59
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
++NDG TI+K +DI HPAAK+LV++AK+Q+ EVGDGTTT V++A E L++A+ +E +H
Sbjct: 60 VTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIH 119
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P + +R A+ KA + + ++A I+ + L K A T ++ K +E A
Sbjct: 120 PTIIAMGYRQAAEKAQEILDDIA--IDASD----RDTLMKVAMTAMTGKGTEKAREPLAE 173
Query: 181 MVVDAVGAI-GDGD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNP 238
++VDAV + DG+ + I I+K G + DS LV GV K + G PKK N
Sbjct: 174 LIVDAVKQVEEDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGM---PKKVENA 230
Query: 239 KILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAI 298
KI LLN +E+K + +AEIR++DPSQ Q+ ++ E +I D ++ V +GA V+ + I
Sbjct: 231 KIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGI 290
Query: 299 GDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN 358
DLA Y A + RV + D+ +++ ATG + T++ ++ E LG E+++
Sbjct: 291 DDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISG 350
Query: 359 ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVR 418
E C + TI++RG + + E ER++ DAI +V ++ VVAGGGA ++
Sbjct: 351 EEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIE 410
Query: 419 F 419
Sbjct: 411 I 411
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 240/425 (56%), Gaps = 13/425 (3%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G +
Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +H
Sbjct: 61 VTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P +I+ + A+ KA + ++E+A + E L + A T+++ K KE A
Sbjct: 121 PSIIIKGYALAAEKAQEILEEIAIKVNPDDEE----TLLRIAMTSITGKNAESHKELLAK 176
Query: 181 MVVDAVGAIG---DGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234
+ VDAV + DG L+ I +K G + +S LV GV K + + PK+
Sbjct: 177 LAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHP---RMPKR 233
Query: 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS 294
KI L+N LE+K + +A+I ++ P Q S ++ E ++ D +D Q+GA VV
Sbjct: 234 VEGAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFV 293
Query: 295 RLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEER 354
+ I DLA Y A I RV + D+ ++A ATG + T+V ++ E LG E EER
Sbjct: 294 QKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEER 353
Query: 355 QVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414
++ E GC + + TI++RGG + I+E ER+L DA+ +V+ ++ V+ GGA
Sbjct: 354 KLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA 413
Query: 415 IDVRF 419
++
Sbjct: 414 PEIEL 418
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 251/429 (58%), Gaps = 23/429 (5%)
Query: 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVT 60
MAA+ P +L + S G N+ A +A++V+S+LGP G+DK++ DD G VT
Sbjct: 1 MAALEGPLAVL----GERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVT 56
Query: 61 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVH 120
I+NDGATI+KLL++ HPAAK+L ++A+ QD EVGDGTT+VV++AAE L+ + ++ +H
Sbjct: 57 ITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIH 116
Query: 121 PQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFAS 180
P ++I +R A +A++ + E ++ + E + L A T++SSK+IG + +FFAS
Sbjct: 117 PTSIIGGYRLACKEAVRYINE---NLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFAS 173
Query: 181 MVVDAVGAIGDGDR-------LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 233
MVVDA A+ D+ +N I + K G + ++S LVNG A G + K
Sbjct: 174 MVVDAASAVKYTDQKGQARYPINSINVLKAHGRSQKESILVNGYALN---CVVGSQGMTK 230
Query: 234 KFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293
+ +N KI L+ L+ K ++ ++DP + I E +I +++ K + +GA V+L
Sbjct: 231 RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVIL 290
Query: 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGT 347
+ I D+ +YF D RV ++DL R+A A+G TV +++ N+ E +LG
Sbjct: 291 TTGGIDDMCLKYFVDAGAMAVRRVLKKDLKRIAKASGATVCSTLANLEGEESFEASMLGQ 350
Query: 348 CEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNST 407
E + +V ++ + + +A+I+LRG D +E ERS+HDA+ +V+R ++ +
Sbjct: 351 AEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSIHDALCVVKRVLESKS 410
Query: 408 VVAGGGAID 416
VV GGGA++
Sbjct: 411 VVPGGGAVE 419
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 261 bits (667), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 242/418 (57%), Gaps = 13/418 (3%)
Query: 6 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDG 65
QP +++L E G+ NI A + + VRSTLGP+GMDK++ DD G + ++NDG
Sbjct: 5 QP-VVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDG 63
Query: 66 ATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLI 125
TI+K + + HPAAK+L+++AK+Q+ EVGDGTTT V++A E LR+A+ ++ VHP +I
Sbjct: 64 VTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVI 123
Query: 126 RSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDA 185
+ ++ A KA + +KE+A ++ + K +L K A T+++ K KE M+V+A
Sbjct: 124 KGYQLAVQKAQEVLKEIAMDVKA----DDKEILHKIAMTSITGKGAEKAKEKLGEMIVEA 179
Query: 186 VGAI----GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241
V A+ G D+ ++I I+K G ++ ++ L+NGV K Q PKK N KI
Sbjct: 180 VTAVVDESGKVDK-DLIKIEKKEGASVDETELINGVLIDKERVSP---QMPKKIENAKIA 235
Query: 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDL 301
LLN +E+K + +AEIR++DP++ ++ E ++ D +D SGA V+ + I DL
Sbjct: 236 LLNCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDL 295
Query: 302 ATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERF 361
A Y A I RV + D+ +++ ATG V T++ ++ E LG EER++ +
Sbjct: 296 AQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAM 355
Query: 362 NIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRF 419
C + T+++RG + IEE R++ DAI +V ++ +VAGGGA ++
Sbjct: 356 IFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIEL 413
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 244/413 (59%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+A N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD--- 193
+ + E ++ + E + L A T++SSK+IG +FFA++VVDAV AI D
Sbjct: 130 RYISE---NLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRG 186
Query: 194 ----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N I + K G + +S L+NG A G + PK+ +N KI L+ L+
Sbjct: 187 QPRYPVNSINVLKAHGRSQMESMLINGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I +++ K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL R+A A+G TV +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+++LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 364 IKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 245/413 (59%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+A N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD--- 193
+ + E ++ + E + L A T++SSK+IG +FFA+MVVDAV A+ D
Sbjct: 130 RYISE---NLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDLRG 186
Query: 194 ----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N + I K G + +S L+NG A G + PK+ +N KI L+ L+
Sbjct: 187 QPRYPVNSVNILKAHGRSQVESMLINGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I ++++K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL R+A A+G ++ +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+I+LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 258 bits (660), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 243/413 (58%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+ N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD--- 193
+ + E ++ + E + L A T++SSK+IG +FFA+MVVDAV AI D
Sbjct: 130 RYINE---NLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRG 186
Query: 194 ----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N + I K G + +S L++G A G + PK+ +N KI L+ L+
Sbjct: 187 QPRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I +++ K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL R+A A+G T+ +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+I+LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 258 bits (659), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 241/402 (59%), Gaps = 19/402 (4%)
Query: 28 NINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87
N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ HPAAK+L ++A
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
Query: 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIE 147
QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A++ + E ++
Sbjct: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINE---NLI 137
Query: 148 GQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD-------RLNMIGI 200
+ E K L A T++SSK+IG + +FFA+MVVDAV A+ D +N I +
Sbjct: 138 INTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVNSINV 197
Query: 201 KKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRL 260
K G + ++S L+NG A + G PK+ +N KI L+ L+ K ++ +
Sbjct: 198 LKAHGRSQKESMLINGYALNCVVASQGM---PKRIVNAKIACLDFSLQKTKMKLGVQVVI 254
Query: 261 SDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEE 320
+DP + I E +I +++ K + +GA V+L+ I D+ +YF + RV +
Sbjct: 255 TDPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTIAVRRVLKR 314
Query: 321 DLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNIFSGCPSGRTAT 374
DL R+A A+G T+ +++ ++ E +LG E + ++ ++ + + +A+
Sbjct: 315 DLKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSAS 374
Query: 375 IVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
I+LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 375 IILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 243/413 (58%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+A N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A + +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-- 194
+ + E ++ + E + L A T++SSK+IG +FFA+MVVDAV AI D
Sbjct: 130 RYINE---NLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRG 186
Query: 195 -----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N + I K G + +S L++G A G + PK+ +N KI L+ L+
Sbjct: 187 QPRYPVNSVNILKAHGRSQMESKLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I +++ K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL R+A A+G T+ +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+I+LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 254 bits (650), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 243/413 (58%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+A N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD--- 193
+ + E ++ + E + L A T++SSK+IG +FFA+MVVDAV A+ D
Sbjct: 130 RYINE---NLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRG 186
Query: 194 ----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N + I K G + +S L+NG A G + K+ +N KI L+ L+
Sbjct: 187 QPRYPVNSVNILKAHGRSQIESMLINGYALN---CVVGSQGMLKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I +++ K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL R+A A+G ++ +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+I+LRG D +E ERSLHDA+ +V+R ++ +VV GGGA++
Sbjct: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 416
>sp|P12612|TCPA_YEAST T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TCP1 PE=1 SV=2
Length = 559
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 238/405 (58%), Gaps = 23/405 (5%)
Query: 28 NINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87
N+ A AVA+VV+S+LGP G+DK++ DD G T++NDGATI+ LLD+ HPA KILV++A+
Sbjct: 29 NVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQ 88
Query: 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSI 146
QD E+GDGTT+VV++A+E L+ A +++ +HP +I FR A +AI+ + E L+ S+
Sbjct: 89 QQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSV 148
Query: 147 EGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-------LNMIG 199
+ K L A T++SSK+IG + +FF++MVVDA+ A+ + + +
Sbjct: 149 DTLG----KETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVN 204
Query: 200 IKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFL--NPKILLLNIELELKSEKENAE 257
+ K G + +S LV G A T + + PK+ N KI L++ L+ +
Sbjct: 205 VLKAHGKSATESLLVPGYALNCTVAS---QAMPKRIAGGNVKIACLDLNLQKARMAMGVQ 261
Query: 258 IRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRV 317
I + DP Q + I E I+ +++ K + +GA+VVL+ I DL + F + I R
Sbjct: 262 INIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRC 321
Query: 318 AEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNIFSGCPSGR 371
+EDL R+A ATG T+ +S++N+ E LG C+ + + ++ + G
Sbjct: 322 KKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHS 381
Query: 372 TATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+++I+LRG D ++E ERSLHD++ +V+R ++ VV GGG ++
Sbjct: 382 SSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVE 426
>sp|P11983|TCPA_MOUSE T-complex protein 1 subunit alpha OS=Mus musculus GN=Tcp1 PE=1 SV=3
Length = 556
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 241/413 (58%), Gaps = 19/413 (4%)
Query: 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVH 76
D S G+A N+ A ++A++V+S+ GP G+DK++ DD G VTI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAI 136
PAAK+L ++A QD EVGDGTT+VV++AAE L+ A ++ +HP ++I +R A +A+
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 137 QKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-- 194
+ + E ++ + E + L A T++SSK+IG ++FA+MVVDAV A+ D
Sbjct: 130 RYINE---NLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARG 186
Query: 195 -----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELEL 249
+N + I K G + +S L+NG A G + PK+ +N KI L+ L+
Sbjct: 187 QPRYPVNSVNILKAHGRSQIESMLINGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
Query: 250 KSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309
K ++ ++DP + I E +I +++ K + +GA V+L+ I D+ +YF +
Sbjct: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMYLKYFVEA 303
Query: 310 DIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDE------VLGTCEHFEERQVGNERFNI 363
RV + DL VA A+G ++ +++ N+ E +LG E + ++ ++ +
Sbjct: 304 GAMAVRRVLKRDLKHVAKASGASILSTLANLEGEETFEVTMLGQAEEVVQERICDDELIL 363
Query: 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAID 416
+ +A+I+LRG D +E ERSLHDA+ +V+R + +VV GGGA++
Sbjct: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLELKSVVPGGGAVE 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,987,366
Number of Sequences: 539616
Number of extensions: 6067383
Number of successful extensions: 21276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 17385
Number of HSP's gapped (non-prelim): 2334
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)