Query 014593
Match_columns 422
No_of_seqs 139 out of 1582
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 14:21:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_H T-complex protein 1 sub 100.0 9.4E-95 3.2E-99 740.6 47.6 409 13-421 1-409 (515)
2 1q3q_A Thermosome alpha subuni 100.0 8.6E-95 2.9E-99 746.1 46.6 414 1-421 1-420 (548)
3 3p9d_G T-complex protein 1 sub 100.0 1.8E-96 6E-101 758.2 32.2 417 4-421 5-422 (550)
4 3ko1_A Chaperonin; 9-fold symm 100.0 1.7E-94 5.8E-99 743.1 41.7 411 4-421 11-427 (553)
5 1a6d_B Thermosome (beta subuni 100.0 3.7E-94 1.3E-98 741.3 43.5 410 5-421 3-418 (543)
6 3ruv_A Chaperonin, CPN; double 100.0 6.4E-94 2.2E-98 738.8 45.2 407 7-421 4-413 (543)
7 1a6d_A Thermosome (alpha subun 100.0 1.8E-93 6.2E-98 735.8 42.4 405 8-421 7-417 (545)
8 3iyg_A T-complex protein 1 sub 100.0 2E-92 6.7E-97 726.4 46.9 399 16-421 3-415 (529)
9 3iyg_G T-complex protein 1 sub 100.0 3.1E-92 1.1E-96 722.7 47.2 399 16-421 2-408 (515)
10 3iyg_B T-complex protein 1 sub 100.0 6.9E-92 2.3E-96 719.9 47.1 402 15-421 2-406 (513)
11 3p9d_A T-complex protein 1 sub 100.0 6.2E-93 2.1E-97 733.1 36.4 414 1-421 1-431 (559)
12 3p9d_D T-complex protein 1 sub 100.0 2.1E-92 7E-97 725.4 37.2 406 10-421 6-423 (528)
13 3iyg_E T-complex protein 1 sub 100.0 8.9E-91 3E-95 712.6 45.6 402 15-421 2-409 (515)
14 3iyg_Z T-complex protein 1 sub 100.0 4.9E-91 1.7E-95 713.5 42.6 398 15-421 2-412 (517)
15 3p9d_C T-complex protein 1 sub 100.0 6.2E-92 2.1E-96 725.7 35.3 410 5-421 1-481 (590)
16 3iyg_D T-complex protein 1 sub 100.0 1.5E-90 5.1E-95 710.7 45.2 398 16-421 4-413 (518)
17 3p9d_E T-complex protein 1 sub 100.0 2E-91 6.7E-96 722.4 37.5 411 8-421 28-452 (562)
18 3p9d_H T-complex protein 1 sub 100.0 4.5E-91 1.5E-95 720.5 38.0 405 7-421 9-432 (568)
19 3p9d_F T-complex protein 1 sub 100.0 4.3E-91 1.5E-95 719.0 30.0 405 10-421 4-424 (546)
20 3iyg_Q T-complex protein 1 sub 100.0 8.5E-89 2.9E-93 697.4 45.8 398 14-421 1-405 (512)
21 3p9d_B T-complex protein 1 sub 100.0 1.3E-90 4.6E-95 713.1 30.1 407 10-421 4-413 (527)
22 3aq1_B Thermosome subunit; gro 100.0 1.5E-82 5.2E-87 648.8 31.0 364 51-421 1-371 (500)
23 1kp8_A Groel protein; chaperon 100.0 3.4E-76 1.2E-80 604.3 35.8 360 17-421 4-423 (547)
24 1iok_A Chaperonin 60; chaperon 100.0 1.8E-76 6.2E-81 606.8 32.4 362 16-422 4-425 (545)
25 1we3_A CPN60(groel); chaperoni 100.0 1.3E-75 4.4E-80 600.9 34.9 359 17-421 4-422 (543)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 7E-75 2.4E-79 593.0 28.4 361 17-422 4-423 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.6E-40 5.5E-45 293.5 18.5 173 208-383 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 3.4E-35 1.1E-39 254.3 14.1 154 214-370 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.4 9.3E-13 3.2E-17 113.9 11.3 147 211-397 2-169 (194)
30 1srv_A Protein (groel (HSP60 c 99.4 7.8E-13 2.7E-17 109.1 8.8 114 216-353 1-134 (145)
31 3osx_A 60 kDa chaperonin; alph 99.4 4.9E-12 1.7E-16 109.6 12.9 143 215-397 13-176 (201)
32 1o13_A Probable NIFB protein; 68.2 10 0.00034 30.7 6.0 52 280-332 68-119 (136)
33 1eo1_A Hypothetical protein MT 65.6 16 0.00054 28.8 6.6 52 280-332 57-108 (124)
34 2yx6_A Hypothetical protein PH 65.0 12 0.00042 29.3 5.8 53 279-332 54-106 (121)
35 2wfb_A Putative uncharacterize 62.3 15 0.0005 28.8 5.8 51 280-331 59-110 (120)
36 2re2_A Uncharacterized protein 52.2 24 0.00084 28.3 5.6 51 279-331 70-120 (136)
37 1rdu_A Conserved hypothetical 51.7 20 0.0007 27.7 4.9 52 280-332 54-105 (116)
38 3v7e_A Ribosome-associated pro 40.8 52 0.0018 23.8 5.3 51 278-331 17-71 (82)
39 2qtd_A Uncharacterized protein 38.0 57 0.0019 24.5 5.4 48 282-331 50-97 (105)
40 2lbw_A H/ACA ribonucleoprotein 34.4 88 0.003 24.4 6.1 47 278-324 26-77 (121)
41 3psh_A Protein HI_1472; substr 34.3 65 0.0022 29.5 6.3 51 282-332 78-154 (326)
42 2r79_A Periplasmic binding pro 31.8 94 0.0032 27.8 6.8 51 282-332 53-111 (283)
43 2xzm_U Ribosomal protein L7AE 31.5 85 0.0029 24.8 5.6 51 278-331 30-85 (126)
44 2wi8_A Iron-uptake system-bind 30.9 88 0.003 28.5 6.5 51 282-332 90-144 (311)
45 2q8p_A Iron-regulated surface 28.4 57 0.0019 28.7 4.6 51 282-332 54-110 (260)
46 3on1_A BH2414 protein; structu 27.4 1E+02 0.0035 23.1 5.2 52 278-332 24-79 (101)
47 2ale_A SNU13, NHP2/L7AE family 27.4 68 0.0023 25.7 4.3 47 278-324 38-89 (134)
48 2etv_A Iron(III) ABC transport 27.0 74 0.0025 29.6 5.3 51 282-332 90-151 (346)
49 3v7q_A Probable ribosomal prot 26.3 1.4E+02 0.0048 22.3 5.8 51 279-332 26-80 (101)
50 3md9_A Hemin-binding periplasm 26.1 95 0.0032 27.1 5.6 52 281-332 52-111 (255)
51 2r7a_A Bacterial heme binding 25.5 1.2E+02 0.0042 26.4 6.3 51 282-332 53-112 (256)
52 3gx8_A Monothiol glutaredoxin- 24.5 2.1E+02 0.0073 21.9 6.8 58 277-335 5-76 (121)
53 2aif_A Ribosomal protein L7A; 23.9 1.2E+02 0.004 24.2 5.2 51 278-331 47-102 (135)
54 4a18_G RPL30; ribosome, eukary 23.2 1.9E+02 0.0066 21.6 6.1 51 278-331 28-83 (104)
55 1n2z_A Vitamin B12 transport p 22.3 87 0.003 27.3 4.6 33 282-314 51-84 (245)
56 2pw9_A Putative formate dehydr 21.7 63 0.0021 29.3 3.4 40 279-318 206-245 (268)
57 3cpq_A 50S ribosomal protein L 21.0 2.5E+02 0.0085 21.2 6.4 51 278-331 27-82 (110)
58 3u5e_c L32, RP73, YL38, 60S ri 20.2 2.3E+02 0.0078 21.3 6.0 51 278-331 28-83 (105)
59 3iz5_f 60S ribosomal protein L 20.0 2.2E+02 0.0074 21.8 5.8 51 278-331 32-87 (112)
No 1
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.4e-95 Score=740.64 Aligned_cols=409 Identities=67% Similarity=1.038 Sum_probs=393.9
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccc
Q 014593 13 KEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (422)
Q Consensus 13 ~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~ 92 (422)
++++++++|.+++.+||.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 36778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhcccccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~ 172 (422)
+||||||++|||++||++|.+++++|+||+.|++||++|++.++++|+++++|++..+..+.++.|.++|+||++||+++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999874443223678999999999999999
Q ss_pred chhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeecccccc
Q 014593 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (422)
Q Consensus 173 ~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~ 252 (422)
.+++.|+++++||+.+++.+-|.++|+|++++|++..||++++|++|+++|.||||.+||+.++||||++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccccc
Confidence 99999999999999999743377899999999999999999999999999999999889999999999999999999999
Q ss_pred ccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 253 KENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 253 ~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
+.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||+++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ 320 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGS 320 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecC
Q 014593 333 VQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412 (422)
Q Consensus 333 ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GG 412 (422)
++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++||++++|++++++++||||
T Consensus 321 ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGG 400 (515)
T 3iyg_H 321 IQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGG 400 (515)
T ss_pred EeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhhc
Q 014593 413 GAIDVRFYH 421 (422)
Q Consensus 413 G~~E~~ls~ 421 (422)
|++|+++|+
T Consensus 401 Ga~e~~~s~ 409 (515)
T 3iyg_H 401 GAIEMELSK 409 (515)
T ss_pred cHHHHHHHH
Confidence 999999986
No 2
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8.6e-95 Score=746.08 Aligned_cols=414 Identities=36% Similarity=0.587 Sum_probs=395.3
Q ss_pred CCcCCchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhH
Q 014593 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAK 80 (422)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ 80 (422)
|+.+|++|+.++++++++.+|.++|.+|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+
T Consensus 1 m~~~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Ak 80 (548)
T 1q3q_A 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAK 80 (548)
T ss_dssp --------CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHH
T ss_pred CCCcCCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHH
Confidence 66655667888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHH
Q 014593 81 ILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSK 160 (422)
Q Consensus 81 ll~~~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~ 160 (422)
|++++|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.+
T Consensus 81 ll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~l~~ 156 (548)
T 1q3q_A 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD----EETLLK 156 (548)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHH
T ss_pred HHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997654 689999
Q ss_pred HHhHhhccccccchhHHHHHHHHHHHHhcCCC-----C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcce
Q 014593 161 CAATTLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234 (422)
Q Consensus 161 va~tsl~sk~~~~~~~~l~~lv~~ai~~v~~~-----~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~ 234 (422)
+|+|+|+||+.++|++.|+++++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++
T Consensus 157 va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ 233 (548)
T 1q3q_A 157 IAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRM---PKR 233 (548)
T ss_dssp HHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTS---CSE
T ss_pred HHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCC---cce
Confidence 99999999999999999999999999999754 1 56799999999999999999999999999999985 899
Q ss_pred eeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceee
Q 014593 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA 314 (422)
Q Consensus 235 ~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v 314 (422)
++||||++++++|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++||+++
T Consensus 234 ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av 313 (548)
T 1q3q_A 234 VENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAV 313 (548)
T ss_dssp ESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEE
T ss_pred ecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHH
Q 014593 315 GRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHD 394 (422)
Q Consensus 315 ~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~d 394 (422)
+++++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|
T Consensus 314 ~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~D 393 (548)
T 1q3q_A 314 RRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALED 393 (548)
T ss_dssp CSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 395 AIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 395 al~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
|++++|+++++|++|||||++|+++|+
T Consensus 394 Al~~~r~a~~~~~ivpGGGa~e~~~~~ 420 (548)
T 1q3q_A 394 AVKVVKDVMEDGAVLPAGGAPEIELAI 420 (548)
T ss_dssp HHHHHHHHHHSCEEEECTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCcccCCcHHHHHHHH
Confidence 999999999999999999999999986
No 3
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.8e-96 Score=758.16 Aligned_cols=417 Identities=57% Similarity=0.947 Sum_probs=391.9
Q ss_pred CCchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHH
Q 014593 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILV 83 (422)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~ 83 (422)
||++|+.++++++++.+|.+++.+|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 5 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~ 84 (550)
T 3p9d_G 5 SQTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLV 84 (550)
T ss_dssp -----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHH
T ss_pred cCCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHh
Q 014593 84 DIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (422)
Q Consensus 84 ~~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~ 163 (422)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..++ .+++.|.++|+
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~-~~~~~L~~vA~ 163 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKS-SGRELLERCAR 163 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC-------CHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc-hhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875431 12578999999
Q ss_pred HhhccccccchhHHHHHHHHHHHHhcCCCC-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEE
Q 014593 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDGD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242 (422)
Q Consensus 164 tsl~sk~~~~~~~~l~~lv~~ai~~v~~~~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll 242 (422)
||++||+++.|++.|+++++||+.++++++ |.++|+|++++|++++||++++|++|+++|.||||.+||++++||||++
T Consensus 164 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll 243 (550)
T 3p9d_G 164 TAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILS 243 (550)
T ss_dssp HHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEE
T ss_pred HhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEE
Confidence 999999999999999999999999998655 8899999999999999999999999999999999999999999999999
Q ss_pred EeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHH
Q 014593 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDL 322 (422)
Q Consensus 243 ~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l 322 (422)
++++|++++++.++++.++++++++++++.|++++++++++|++.|++||+++++|++.+++||+++||++++++++++|
T Consensus 244 ~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~l 323 (550)
T 3p9d_G 244 LNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDM 323 (550)
T ss_dssp ECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHH
T ss_pred eccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Q 014593 323 LRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRA 402 (422)
Q Consensus 323 ~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~ 402 (422)
+|||++|||++++++++++++.+|+|+.|++.++++++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|++
T Consensus 324 erIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~a 403 (550)
T 3p9d_G 324 NRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRA 403 (550)
T ss_dssp HHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEecCCHHHHhhhc
Q 014593 403 TKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 403 ~~~~~vv~GGG~~E~~ls~ 421 (422)
+++|++|||||++|+++|+
T Consensus 404 v~~g~iVpGGGa~e~~~s~ 422 (550)
T 3p9d_G 404 LQNKLIVAGGGATEMEVSK 422 (550)
T ss_dssp HHSCCEEETTTHHHHHHHH
T ss_pred HhcCCcccCCCHHHHHHHH
Confidence 9999999999999999986
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.7e-94 Score=743.12 Aligned_cols=411 Identities=37% Similarity=0.646 Sum_probs=383.7
Q ss_pred CCchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHH
Q 014593 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILV 83 (422)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~ 83 (422)
|.++|+.++++++++.+|.+|+.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 11 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 90 (553)
T 3ko1_A 11 PEGIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHH
T ss_pred CCCCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHH
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHh
Q 014593 84 DIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (422)
Q Consensus 84 ~~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~ 163 (422)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.++|+
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~e~L~~vA~ 166 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND----TDLLRKIAM 166 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC----HHHHHHHHH
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987655 689999999
Q ss_pred HhhccccccchhHHHHHHHHHHHHhcCCC-----C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeC
Q 014593 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLN 237 (422)
Q Consensus 164 tsl~sk~~~~~~~~l~~lv~~ai~~v~~~-----~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n 237 (422)
||++||+.+++++.|+++++||+.+++++ . |+++|+|++++|+++.||++++|++|+++|.||+| |++++|
T Consensus 167 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~ien 243 (553)
T 3ko1_A 167 TSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGM---PKRLEN 243 (553)
T ss_dssp HHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTS---CSCCBS
T ss_pred HHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCC---cccccc
Confidence 99999999999999999999999999864 1 67889999999999999999999999999999984 899999
Q ss_pred ceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCC
Q 014593 238 PKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRV 317 (422)
Q Consensus 238 ~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v 317 (422)
|||++++++|++++++.++++.+++++++++++++|++++++++++|++.|++|||++++|++.+++||.++||++++++
T Consensus 244 ~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v 323 (553)
T 3ko1_A 244 AKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRA 323 (553)
T ss_dssp CEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCC
T ss_pred ceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHH
Q 014593 318 AEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIM 397 (422)
Q Consensus 318 ~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~ 397 (422)
++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+
T Consensus 324 ~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~ 403 (553)
T 3ko1_A 324 KKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALG 403 (553)
T ss_dssp CHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcEEecCCHHHHhhhc
Q 014593 398 IVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 398 ~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
++|+++++|++|||||++|++||+
T Consensus 404 ~~r~av~~g~iVpGGGa~e~~~s~ 427 (553)
T 3ko1_A 404 TVADVIKDGRAIAGGGAVEIEIAK 427 (553)
T ss_dssp HHHHHHHHCEEEETTTHHHHHHHH
T ss_pred HHHHHhhcCceecCCceeEeHHHH
Confidence 999999999999999999999986
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.7e-94 Score=741.35 Aligned_cols=410 Identities=35% Similarity=0.592 Sum_probs=382.8
Q ss_pred CchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHH
Q 014593 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVD 84 (422)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~ 84 (422)
+.+|+.++++++++.+|.+++.+|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 3 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e 82 (543)
T 1a6d_B 3 AGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVE 82 (543)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHH
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhH
Q 014593 85 IAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAAT 164 (422)
Q Consensus 85 ~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~t 164 (422)
+|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+|
T Consensus 83 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~----~~~l~~va~t 158 (543)
T 1a6d_B 83 VSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE----KALLLKMAQT 158 (543)
T ss_dssp HHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH----HHHHHHHHHH
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987543 6899999999
Q ss_pred hhccccccchhHHHHHHHHHHHHhcCCC-----C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCc
Q 014593 165 TLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNP 238 (422)
Q Consensus 165 sl~sk~~~~~~~~l~~lv~~ai~~v~~~-----~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~ 238 (422)
+|+||+.++|++.|+++++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++||
T Consensus 159 sl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~ 235 (543)
T 1a6d_B 159 SLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGM---PDVVKDA 235 (543)
T ss_dssp HHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTS---CSEEEEE
T ss_pred HhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCC---cceecCC
Confidence 9999999999999999999999999754 1 67789999999999999999999999999999985 8999999
Q ss_pred eEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCC
Q 014593 239 KILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA 318 (422)
Q Consensus 239 kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~ 318 (422)
||++++++|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++||+++++++
T Consensus 236 kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~ 315 (543)
T 1a6d_B 236 KIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVK 315 (543)
T ss_dssp EEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCC
T ss_pred eEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHH
Q 014593 319 EEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMI 398 (422)
Q Consensus 319 ~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~ 398 (422)
+++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+++.+++|.||+++||+++
T Consensus 316 k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~ 395 (543)
T 1a6d_B 316 KSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHV 395 (543)
T ss_dssp HHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEecCCHHHHhhhc
Q 014593 399 VRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 399 ~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
+|+++++|++|||||++|+++|+
T Consensus 396 ~r~a~~~~~ivpGGGa~e~~~s~ 418 (543)
T 1a6d_B 396 VASALEDGAYAAGGGATAAEIAF 418 (543)
T ss_dssp HHHHHHHCEEEETTTHHHHHHHH
T ss_pred HHHHHHCCCccCCccHHHHHHHH
Confidence 99999999999999999999985
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=6.4e-94 Score=738.83 Aligned_cols=407 Identities=35% Similarity=0.577 Sum_probs=395.6
Q ss_pred hhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHH
Q 014593 7 PQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIA 86 (422)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~ 86 (422)
+| .++++++++.+|.+|+.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 4 ~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 82 (543)
T 3ruv_A 4 QP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVA 82 (543)
T ss_dssp CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHH
Confidence 45 78899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhh
Q 014593 87 KSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTL 166 (422)
Q Consensus 87 ~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl 166 (422)
++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+||+
T Consensus 83 ~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~L~~va~tsl 158 (543)
T 3ruv_A 83 KTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD----KEILTKIAMTSI 158 (543)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHHHHHHHH
T ss_pred HHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999997655 689999999999
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCC-C--CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEE
Q 014593 167 SSKLIGGEKEFFASMVVDAVGAIGDG-D--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243 (422)
Q Consensus 167 ~sk~~~~~~~~l~~lv~~ai~~v~~~-~--~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~ 243 (422)
+||+.+++++.|+++++||+.+++++ . |.++|+|+++.|+++.||++++|++|+++|.||+| |+.++||||+++
T Consensus 159 ~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~~~n~kIll~ 235 (543)
T 3ruv_A 159 TGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQM---PKKVTDAKIALL 235 (543)
T ss_dssp HHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTS---CSEEEEEEEEEE
T ss_pred cccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccc---cccccCcEEEEE
Confidence 99999999999999999999999875 2 67889999999999999999999999999999985 899999999999
Q ss_pred eeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHH
Q 014593 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLL 323 (422)
Q Consensus 244 ~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~ 323 (422)
+++|++++++.++++.+++++++++++++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+
T Consensus 236 ~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le 315 (543)
T 3ruv_A 236 NCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDME 315 (543)
T ss_dssp SSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred cccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh
Q 014593 324 RVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAT 403 (422)
Q Consensus 324 ~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~ 403 (422)
|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 316 ~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (543)
T 3ruv_A 316 KLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTI 395 (543)
T ss_dssp HHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEecCCHHHHhhhc
Q 014593 404 KNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 404 ~~~~vv~GGG~~E~~ls~ 421 (422)
++|++|||||++|++||+
T Consensus 396 ~~g~iVpGGGa~e~~~s~ 413 (543)
T 3ruv_A 396 EDGRIVSGGGSTEVELSM 413 (543)
T ss_dssp HHCEEEETTTHHHHHHHH
T ss_pred hcCCeecCCcHHHHHHHH
Confidence 999999999999999985
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.8e-93 Score=735.80 Aligned_cols=405 Identities=38% Similarity=0.639 Sum_probs=384.9
Q ss_pred hhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHH
Q 014593 8 QIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87 (422)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~ 87 (422)
|+.++++++++.+|.++|.+|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhc
Q 014593 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLS 167 (422)
Q Consensus 88 ~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~ 167 (422)
+||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|+++++| + .+ ++.|.++|+|+|+
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~----~~~l~~va~tsl~ 160 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TD----DATLRKIALTALS 160 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CC----HHHHHHHHHHHTT
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CC----HHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999998 5 34 6899999999999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCC-----C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEE
Q 014593 168 SKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241 (422)
Q Consensus 168 sk~~~~~~~~l~~lv~~ai~~v~~~-----~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIl 241 (422)
||+.++|++.|+++++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++||||+
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIl 237 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKM---PDVVKNAKIA 237 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTS---CSEEEEEEEE
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCC---cceecCCEEE
Confidence 9999999999999999999999754 1 56899999999999999999999999999999985 8999999999
Q ss_pred EEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHH
Q 014593 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEED 321 (422)
Q Consensus 242 l~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~ 321 (422)
+++++|++++++.++++.+++++++++++++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++
T Consensus 238 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~ 317 (545)
T 1a6d_A 238 LIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSD 317 (545)
T ss_dssp EECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHH
T ss_pred EEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 014593 322 LLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (422)
Q Consensus 322 l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~ 401 (422)
|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+++.+++|.||+++||++++|+
T Consensus 318 le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~ 397 (545)
T 1a6d_A 318 MEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAI 397 (545)
T ss_dssp HHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEecCCHHHHhhhc
Q 014593 402 ATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 402 ~~~~~~vv~GGG~~E~~ls~ 421 (422)
++++|++|||||++|+++|+
T Consensus 398 a~~~g~iVpGGGa~e~~~~~ 417 (545)
T 1a6d_A 398 TKEDGKFLWGGGAVEAELAM 417 (545)
T ss_dssp HHHHCEEEETTTHHHHHHHH
T ss_pred HHhCCCEEeCcCHHHHHHHH
Confidence 99999999999999999986
No 8
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-92 Score=726.39 Aligned_cols=399 Identities=37% Similarity=0.609 Sum_probs=383.6
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccCC
Q 014593 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (422)
Q Consensus 16 ~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 95 (422)
+++.+|.++|.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhh-hcccccCCChHHHHHHHHHHHhHhhccccccch
Q 014593 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (422)
Q Consensus 96 Gttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~-~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~ 174 (422)
||||++|||++||++|.+++++|+||+.|++||++|++.++++|++ ++++++..+ ++.|.++|+||++||+.+++
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG----RDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHHHHHHHHHhccCccccc
Confidence 9999999999999999999999999999999999999999999998 999987654 68899999999999999999
Q ss_pred hHHHHHHHHHHHHhcCC---CC----CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeec
Q 014593 175 KEFFASMVVDAVGAIGD---GD----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (422)
Q Consensus 175 ~~~l~~lv~~ai~~v~~---~~----~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (422)
++.|+++++||+.++++ +. |.++|+|++++|+++.||++++|++|++++.||+ ||++++||||++++++|
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIlll~~~l 235 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQG---MPKRIVNAKIACLDFSL 235 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCccccc---CCcccCCceEEEecCCc
Confidence 99999999999999973 21 4667999999999999999999999999999987 58999999999999999
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHH
Q 014593 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (422)
Q Consensus 248 ~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~ 327 (422)
++++++.++++.++++++++.+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 236 e~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~ 315 (529)
T 3iyg_A 236 QKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAK 315 (529)
T ss_pred ccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEceeccCCC------CCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 014593 328 ATGGTVQTSVNNVV------DEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (422)
Q Consensus 328 ~tGa~ii~~~~~l~------~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~ 401 (422)
+|||++++++++++ +++||+|+.|+++++|+++|++|+||+++++|||+|||+++.+++|.||+++||++++|+
T Consensus 316 ~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 316 ASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred HhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987764 578999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEecCCHHHHhhhc
Q 014593 402 ATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 402 ~~~~~~vv~GGG~~E~~ls~ 421 (422)
++++|++||||||+|++||+
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~ 415 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSI 415 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHH
Confidence 99999999999999999986
No 9
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-92 Score=722.72 Aligned_cols=399 Identities=30% Similarity=0.547 Sum_probs=384.5
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccCC
Q 014593 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (422)
Q Consensus 16 ~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 95 (422)
+++++|.+++.+|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 81 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGD 81 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccccchh
Q 014593 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (422)
Q Consensus 96 Gttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~~ 175 (422)
||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+||++||.+++|.
T Consensus 82 GTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~va~tsl~sK~i~~~~ 157 (515)
T 3iyg_G 82 GTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN----RDTMLNIINSSITTKVISRWS 157 (515)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC----HHHHHHHHHHHhcCCchhhHH
Confidence 9999999999999999999999999999999999999999999999999988765 688999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC-C-----Ccc-ceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeecc
Q 014593 176 EFFASMVVDAVGAIGDG-D-----RLN-MIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELE 248 (422)
Q Consensus 176 ~~l~~lv~~ai~~v~~~-~-----~~~-~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~ 248 (422)
+.++++++||+..+.++ + |.+ +|+|++++|++++||++++|++|++++.||+ ||++++||||++++++|+
T Consensus 158 ~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll~~~~Le 234 (515)
T 3iyg_G 158 SLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLE 234 (515)
T ss_pred HHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCC---CcceeeeeEEEEEccccc
Confidence 99999999999988732 1 333 4999999999999999999999999999986 689999999999999999
Q ss_pred ccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHH
Q 014593 249 LKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAA 328 (422)
Q Consensus 249 ~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~ 328 (422)
+++++.++++.+++++++.++++.|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++
T Consensus 235 ~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~ 314 (515)
T 3iyg_G 235 YKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARA 314 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeEceeccCCCCCCccc-cceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 014593 329 TGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNST 407 (422)
Q Consensus 329 tGa~ii~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~ 407 (422)
|||+++++++++++++||+ |+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++++
T Consensus 315 tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ 394 (515)
T 3iyg_G 315 CGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQ 394 (515)
T ss_pred hCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHhhhc
Q 014593 408 VVAGGGAIDVRFYH 421 (422)
Q Consensus 408 vv~GGG~~E~~ls~ 421 (422)
+|||||++|+++|+
T Consensus 395 ivpGGGa~e~~~~~ 408 (515)
T 3iyg_G 395 LVPGGGASEMAVAH 408 (515)
T ss_pred EEeCCCHHHHHHHH
Confidence 99999999999986
No 10
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.9e-92 Score=719.85 Aligned_cols=402 Identities=34% Similarity=0.550 Sum_probs=386.3
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCC--CCeEEeccHHHHHhhccccCchhHHHHHHHHhcccc
Q 014593 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDK--GTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (422)
Q Consensus 15 ~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~--g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~ 92 (422)
++++.+|.++|.+|+.||..|++++||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 456789999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhcccccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~ 172 (422)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++.+. ..+++.|.++|+|+++||+.+
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~-~~~~~~l~~va~tslssK~~~ 160 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDE-VKFRQDLMNIAGTTLSSKLLT 160 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCccccc-ccCHHHHHHHHHhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999987321 113689999999999999999
Q ss_pred chhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeecccccc
Q 014593 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (422)
Q Consensus 173 ~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~ 252 (422)
++++.|+++++||+.+++++-|.++|+|++++|++..||++++|++|+++|.+| ||++++||||++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~----m~~~~en~kIll~~~~Le~~k~ 236 (513)
T 3iyg_B 161 HHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKI 236 (513)
T ss_pred cchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC----CceeecCceEEEEcCCcccccc
Confidence 999999999999999998644678999999999999999999999999999886 6999999999999999999999
Q ss_pred c-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 253 K-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 253 ~-~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
+ .++++.+++++++.++.+.|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||
T Consensus 237 e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa 316 (513)
T 3iyg_B 237 KIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGG 316 (513)
T ss_pred cccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEec
Q 014593 332 TVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAG 411 (422)
Q Consensus 332 ~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~G 411 (422)
+++++++++++++||+|+.|+++.+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||
T Consensus 317 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpG 396 (513)
T 3iyg_B 317 EIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYG 396 (513)
T ss_pred EEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhhhc
Q 014593 412 GGAIDVRFYH 421 (422)
Q Consensus 412 GG~~E~~ls~ 421 (422)
||++|+++|+
T Consensus 397 GGa~e~~~~~ 406 (513)
T 3iyg_B 397 GGCSEMLMAH 406 (513)
T ss_pred CcHHHHHHHH
Confidence 9999999986
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.2e-93 Score=733.09 Aligned_cols=414 Identities=36% Similarity=0.590 Sum_probs=392.1
Q ss_pred CCcC-CchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchh
Q 014593 1 MAAM-MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAA 79 (422)
Q Consensus 1 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~ 79 (422)
|+.| ++.+...+++++++.+|.++|.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~A 80 (559)
T 3p9d_A 1 MSQLFNNSRSDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAG 80 (559)
T ss_dssp -------CCCCSCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHH
T ss_pred CCccccCCccchhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHH
Confidence 6665 444556688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhh-hcccccCCChHHHHHHH
Q 014593 80 KILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLL 158 (422)
Q Consensus 80 ~ll~~~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~-~s~~v~~~~~~~~~~~l 158 (422)
+|++++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++..+ ++.|
T Consensus 81 kll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~L 156 (559)
T 3p9d_A 81 KILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG----KETL 156 (559)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC------CTTH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 999987643 4689
Q ss_pred HHHHhHhhccccccchhHHHHHHHHHHHHhcCC-C----C--CccceeeeeecCCCccceeeEeeEEEeeccCCccccCC
Q 014593 159 SKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD-G----D--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQ 231 (422)
Q Consensus 159 ~~va~tsl~sk~~~~~~~~l~~lv~~ai~~v~~-~----~--~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~ 231 (422)
.++|+||++||+.++|++.|++|++||+.++++ + . |.+.|+|++++|++++||++++|++|+++|.||+ |
T Consensus 157 ~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~---m 233 (559)
T 3p9d_A 157 INIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQA---M 233 (559)
T ss_dssp HHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTT---S
T ss_pred HHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCC---c
Confidence 999999999999999999999999999999984 1 2 6788999999999999999999999999999998 5
Q ss_pred cceee--CceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhC
Q 014593 232 PKKFL--NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309 (422)
Q Consensus 232 ~~~~~--n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~ 309 (422)
|+.++ ||||++++++|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++
T Consensus 234 ~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~ 313 (559)
T 3p9d_A 234 PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEA 313 (559)
T ss_dssp CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHT
T ss_pred ceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHc
Confidence 89999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCCCHHHHHHHHHHhCCeEceec------cCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHH
Q 014593 310 DIFCAGRVAEEDLLRVAAATGGTVQTSV------NNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQ 383 (422)
Q Consensus 310 ~I~~v~~v~~~~l~~ia~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~ 383 (422)
||++++++++.+|+|||++|||++++++ +++++++||+|+.|+++++++++|++|+||+++++|||+|||+|+.
T Consensus 314 ~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~ 393 (559)
T 3p9d_A 314 KIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDY 393 (559)
T ss_dssp TCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHH
T ss_pred CCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHH
Confidence 9999999999999999999999999998 7888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 384 FIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 384 ~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
+++|.||+++|||+++|+++++|++|||||++|++||+
T Consensus 394 ~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~ 431 (559)
T 3p9d_A 394 SLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNI 431 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHH
Confidence 99999999999999999999999999999999999986
No 12
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.1e-92 Score=725.39 Aligned_cols=406 Identities=29% Similarity=0.484 Sum_probs=392.2
Q ss_pred hhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhc
Q 014593 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQ 89 (422)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~ 89 (422)
.-++.+.++.+|.++|.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++|
T Consensus 6 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 85 (528)
T 3p9d_D 6 PSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQ 85 (528)
T ss_dssp -CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccc
Q 014593 90 DSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSK 169 (422)
Q Consensus 90 ~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk 169 (422)
|+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+||++||
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~l~~va~tsl~sK 161 (528)
T 3p9d_D 86 DSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD----REQLVRAASTSLSSK 161 (528)
T ss_dssp HHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC----HHHHHHHHHHHSCSS
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999998655 689999999999999
Q ss_pred cccchhHHHHHHHHHHHHhcCCC--C--CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEee
Q 014593 170 LIGGEKEFFASMVVDAVGAIGDG--D--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245 (422)
Q Consensus 170 ~~~~~~~~l~~lv~~ai~~v~~~--~--~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~ 245 (422)
++++|++.|+++++||+.++++. . |.++|+|++++|++++||++++|++|+++|.||+| ||+.++||||+++++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~--m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 162 IVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAG--GPTRKEKAKIGLIQF 239 (528)
T ss_dssp SCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSS--CCSEESSEEEEEECC
T ss_pred ccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCccc--CcccccCceEEEEec
Confidence 99999999999999999999862 2 67899999999999999999999999999999986 799999999999999
Q ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCc-----cHHHHHHHHhCCceeecCCCHH
Q 014593 246 ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAI-----GDLATQYFADRDIFCAGRVAEE 320 (422)
Q Consensus 246 ~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i-----~~~~~~~l~~~~I~~v~~v~~~ 320 (422)
+|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++| ++.+++||.++||+++++++++
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~ 319 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIERE 319 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTH
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCC--C-CceEEEEEecCCHHHHHHHHHHHHHHHH
Q 014593 321 DLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--S-GRTATIVLRGGADQFIEEAERSLHDAIM 397 (422)
Q Consensus 321 ~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~--~-~~~~Till~g~~~~~l~e~~~~i~dal~ 397 (422)
+|+|||++|||+++++++++++++||+|+.|++.++++++|++|+||+ + +++|||+|||+|+.+++|.||+++||++
T Consensus 320 ~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~ 399 (528)
T 3p9d_D 320 EIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALC 399 (528)
T ss_dssp HHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 6 8899999999999999999999999999
Q ss_pred HHHHHhcCCcEEecCCHHHHhhhc
Q 014593 398 IVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 398 ~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
++|+++++|++|||||++|+++|+
T Consensus 400 ~~r~av~~~~iVpGGGa~e~~~s~ 423 (528)
T 3p9d_D 400 VIRCLVKERGLIAGGGAPEIEISR 423 (528)
T ss_dssp HHHHHHHSSCEEETTTHHHHHHHH
T ss_pred HHHHHHhcCCccCCCCHHHHHHHH
Confidence 999999999999999999999985
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.9e-91 Score=712.57 Aligned_cols=402 Identities=31% Similarity=0.524 Sum_probs=385.9
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccC
Q 014593 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVG 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~G 94 (422)
.+++.+|.+||.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~G 81 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIG 81 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccccch
Q 014593 95 DGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (422)
Q Consensus 95 DGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~ 174 (422)
|||||++|||++||++|.+++.+|+||+.|++||++|++.++++|+++++|++... .+++.|.++|+||++||.++.+
T Consensus 82 DGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~--~~~~~l~~vA~tsl~sK~i~~~ 159 (515)
T 3iyg_E 82 DGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM--KNTEPLIQTAKTTLGSKVVNSC 159 (515)
T ss_pred CchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc--cCHHHHHHHHHHHhcccchhHH
Confidence 99999999999999999999999999999999999999999999999999886531 1267899999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCC---C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeecccc
Q 014593 175 KEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELK 250 (422)
Q Consensus 175 ~~~l~~lv~~ai~~v~~~---~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~ 250 (422)
.+.|+++++||+..+.+. + |+++|+|++++|+++.||++++|++|+++|.||+ ||+.++||+|+++++++++.
T Consensus 160 ~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~---m~~~~~~~kIall~~~le~~ 236 (515)
T 3iyg_E 160 HRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQ---MPKQVEDAKIAILTCPFEPP 236 (515)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEeccccccc---ccccCCCceEEEEcCccccc
Confidence 999999999999998652 2 6789999999999999999999999999999998 48999999999999999999
Q ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhC
Q 014593 251 SEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATG 330 (422)
Q Consensus 251 ~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tG 330 (422)
+++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++||
T Consensus 237 k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tG 316 (515)
T 3iyg_E 237 KPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATG 316 (515)
T ss_pred cccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEceeccCCCCCCccccceEEEEEECC--EEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcE
Q 014593 331 GTVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTV 408 (422)
Q Consensus 331 a~ii~~~~~l~~~~lG~~~~v~~~~~g~--~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~v 408 (422)
|+++++++++++++||+|+.|+++++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++
T Consensus 317 a~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~i 396 (515)
T 3iyg_E 317 GRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRV 396 (515)
T ss_pred CEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999997 89999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHhhhc
Q 014593 409 VAGGGAIDVRFYH 421 (422)
Q Consensus 409 v~GGG~~E~~ls~ 421 (422)
|||||++|+++|+
T Consensus 397 VpGGGa~e~~~~~ 409 (515)
T 3iyg_E 397 VYGGGAAEISCAL 409 (515)
T ss_pred CCCCcHHHHHHHH
Confidence 9999999999986
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.9e-91 Score=713.50 Aligned_cols=398 Identities=26% Similarity=0.464 Sum_probs=383.6
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccC
Q 014593 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVG 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~G 94 (422)
..+..+|.+++.+|+.||++|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 2 ~~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~G 81 (517)
T 3iyg_Z 2 KAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITG 81 (517)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccccch
Q 014593 95 DGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (422)
Q Consensus 95 DGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~ 174 (422)
|||||+++|+++||++|.+++++|+||+.|++||++|++.++++|+++++|++. + ++.|.++|+||++||+.+.+
T Consensus 82 DGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~----~~~L~~va~tsl~sKi~~~~ 156 (517)
T 3iyg_Z 82 DGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-D----RETLIDVARTSLRTKVHAEL 156 (517)
T ss_pred CCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-C----HHHHHHHHHHHhccccchhH
Confidence 999999999999999999999999999999999999999999999999998874 3 57899999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCC---CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeeccccc
Q 014593 175 KEFFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKS 251 (422)
Q Consensus 175 ~~~l~~lv~~ai~~v~~~~---~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~ 251 (422)
.+.|+++++||+..+.+++ |+++|+|++++|++..||++++|++|++++.||+ ||++++||||++++++|++++
T Consensus 157 ~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~---m~~~ien~kIll~~~~le~~k 233 (517)
T 3iyg_Z 157 ADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPD---MKKRVEDAYILTCNVSLEYEK 233 (517)
T ss_pred HHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCC---ccccccCCeEEEecccccccc
Confidence 9999999999999986532 7889999999999999999999999999999997 689999999999999999999
Q ss_pred cccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCe---------EEEecCCccHHHHHHHHhCCceeecCCCHHHH
Q 014593 252 EKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAK---------VVLSRLAIGDLATQYFADRDIFCAGRVAEEDL 322 (422)
Q Consensus 252 ~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~---------lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l 322 (422)
++.++++.++++++++++.++|++++++.+++|...+++ |||++++|++.+++||.++||++++++++++|
T Consensus 234 ~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~l 313 (517)
T 3iyg_Z 234 TEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNM 313 (517)
T ss_pred cccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHH
Confidence 999999999999999999999999999999999988877 58999999999999999999999999999999
Q ss_pred HHHHHHhCCeEceeccCCCCCC-ccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 014593 323 LRVAAATGGTVQTSVNNVVDEV-LGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (422)
Q Consensus 323 ~~ia~~tGa~ii~~~~~l~~~~-lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~ 401 (422)
+|||++|||++++++++++++. ||+|+ |++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++||++++|+
T Consensus 314 eria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~ 392 (517)
T 3iyg_Z 314 ERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKN 392 (517)
T ss_pred HHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999 999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEecCCHHHHhhhc
Q 014593 402 ATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 402 ~~~~~~vv~GGG~~E~~ls~ 421 (422)
++++|++|||||++|+++|+
T Consensus 393 av~~~~iVpGGGa~e~~~s~ 412 (517)
T 3iyg_Z 393 AIDDGCVVPGAGAVEVAMAE 412 (517)
T ss_pred HHhcceEecCccHHHHHHHH
Confidence 99999999999999999986
No 15
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.2e-92 Score=725.74 Aligned_cols=410 Identities=29% Similarity=0.548 Sum_probs=385.8
Q ss_pred CchhhhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHH
Q 014593 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVD 84 (422)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~ 84 (422)
|++|+.+++++.++.+|.+|+.+|+.||..|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e 80 (590)
T 3p9d_C 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLE 80 (590)
T ss_dssp -----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHH
T ss_pred CCCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCChhHHHHHHHHHHHHHHhH-HhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHh
Q 014593 85 IAKSQDSEVGDGTTTVVLLAAEFLREAKPF-IEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (422)
Q Consensus 85 ~~~~~~~~~GDGttt~vlL~~~ll~~a~~l-i~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~ 163 (422)
+|++||+++||||||++|||++||++|.++ +.+|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~L~~vA~ 156 (590)
T 3p9d_C 81 LSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN----DAAMKKLIQ 156 (590)
T ss_dssp HTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC----THHHHHHHT
T ss_pred HHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC----HHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999988754 578999999
Q ss_pred HhhccccccchhHHHHHHHHHHHHhcCCCC------------Cc-cceeeeeecCCCccceeeEeeEEEeeccCCccccC
Q 014593 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDGD------------RL-NMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQ 230 (422)
Q Consensus 164 tsl~sk~~~~~~~~l~~lv~~ai~~v~~~~------------~~-~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~ 230 (422)
||++||+.++|++.|+++++||+..++++. |. ++|+|++++|+++.||++++|++|++++.+|.
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~--- 233 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPK--- 233 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTT---
T ss_pred HHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCC---
Confidence 999999999999999999999999998642 22 26999999999999999999999999998874
Q ss_pred CcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCC
Q 014593 231 QPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD 310 (422)
Q Consensus 231 ~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~ 310 (422)
||++++||||++++++|++++++.++++.++++++++++++.|++++++++++|++.|++|||++++|++.+++||.++|
T Consensus 234 m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~ 313 (590)
T 3p9d_C 234 MSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG 313 (590)
T ss_dssp SCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT
T ss_pred CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCHHHHHHHHHHhCCeEceeccCCCCCCccc-cceEEEEEECCEEEEEEEcCCCCce-----------------
Q 014593 311 IFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRT----------------- 372 (422)
Q Consensus 311 I~~v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~----------------- 372 (422)
|++++++++.+|+|||++|||+++++++++++++||+ |+.|++.++++++|++|+||++++.
T Consensus 314 I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~ 393 (590)
T 3p9d_C 314 CSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRR 393 (590)
T ss_dssp CCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------
T ss_pred ceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999 9999999999999999999988777
Q ss_pred ---------------------------------------EEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCC
Q 014593 373 ---------------------------------------ATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGG 413 (422)
Q Consensus 373 ---------------------------------------~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG 413 (422)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||
T Consensus 394 ~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGG 473 (590)
T 3p9d_C 394 WKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGG 473 (590)
T ss_dssp ----------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTT
T ss_pred hhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCcc
Confidence 99999999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q 014593 414 AIDVRFYH 421 (422)
Q Consensus 414 ~~E~~ls~ 421 (422)
++|+++|+
T Consensus 474 a~e~~~s~ 481 (590)
T 3p9d_C 474 ATEMAVSV 481 (590)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 16
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-90 Score=710.72 Aligned_cols=398 Identities=35% Similarity=0.554 Sum_probs=384.0
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccCC
Q 014593 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (422)
Q Consensus 16 ~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 95 (422)
.++.+|.+++.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccccchh
Q 014593 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (422)
Q Consensus 96 Gttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~~ 175 (422)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+||++||+.++|+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD----RETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC----hHHHHHHhHhhhccccchhhH
Confidence 9999999999999999999999999999999999999999999999999987654 688999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC---CC--CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeecccc
Q 014593 176 EFFASMVVDAVGAIGD---GD--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELK 250 (422)
Q Consensus 176 ~~l~~lv~~ai~~v~~---~~--~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~ 250 (422)
+.|+++++||+.++++ +. |.++|+|++++|++..||++++|++|+++|.| +||++++||||++++++|+++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~----~mp~~i~n~kIlll~~~Le~~ 235 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN----SGITRVEKAKIGLIQFCLSAP 235 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc----CCCccccCceEEEEEeecccc
Confidence 9999999999999985 22 67889999999999999999999999999987 379999999999999999999
Q ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEe-----cCCccHHHHHHHHhCCceeecCCCHHHHHHH
Q 014593 251 SEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS-----RLAIGDLATQYFADRDIFCAGRVAEEDLLRV 325 (422)
Q Consensus 251 ~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~-----~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~i 325 (422)
+++.++++.++++++++++.++|++++++++++|++.|++|||+ +++|++.+++||.++||++++++++.+|+||
T Consensus 236 k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~i 315 (518)
T 3iyg_D 236 KTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFI 315 (518)
T ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhCCeEceeccCCCCCCccccceEEEEEECC-EEEEEEEcCCC-CceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh
Q 014593 326 AAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN-ERFNIFSGCPS-GRTATIVLRGGADQFIEEAERSLHDAIMIVRRAT 403 (422)
Q Consensus 326 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~-~~~~~~~~~~~-~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~ 403 (422)
|++|||+++++++++++++||+|+.|++.++|+ ++|++|+||++ +++|||+|||+|+.+++|.||+++||++++|+++
T Consensus 316 a~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (518)
T 3iyg_D 316 CKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV 395 (518)
T ss_pred HHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 89999999988 8999999999999999999999999999999999
Q ss_pred cCCcEEecCCHHHHhhhc
Q 014593 404 KNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 404 ~~~~vv~GGG~~E~~ls~ 421 (422)
++|++|||||++|+++|+
T Consensus 396 ~~~~iVpGGGa~e~~~~~ 413 (518)
T 3iyg_D 396 KKRALIAGGGAPEIELAL 413 (518)
T ss_pred hCCCEeecCcHHHHHHHH
Confidence 999999999999999986
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2e-91 Score=722.36 Aligned_cols=411 Identities=33% Similarity=0.540 Sum_probs=386.8
Q ss_pred hhhhcccc--ccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHH
Q 014593 8 QIILLKEG--TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (422)
Q Consensus 8 ~~~~~~~~--~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~ 85 (422)
|..++.++ .++.+|.+||.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 28 ~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 107 (562)
T 3p9d_E 28 PFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQL 107 (562)
T ss_dssp --CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHH
Confidence 44455555 4777999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHh
Q 014593 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATT 165 (422)
Q Consensus 86 ~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~ts 165 (422)
|++||+++||||||++|||++||++|.+++++|+||+.|++||++|++.++++|+++++|++..+...+++.|.++|+||
T Consensus 108 a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tS 187 (562)
T 3p9d_E 108 SKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTS 187 (562)
T ss_dssp HHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHH
T ss_pred HHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999987642111237899999999
Q ss_pred hccccccchhHHHHHHHHHHHHhcCCC---C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCccee------
Q 014593 166 LSSKLIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF------ 235 (422)
Q Consensus 166 l~sk~~~~~~~~l~~lv~~ai~~v~~~---~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~------ 235 (422)
++||+++.+.+.|+++++||+..+.+. + |.++|+|++++|++++||++++|++|+++|.||+| |+.+
T Consensus 188 l~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m---~~~~~~~~~~ 264 (562)
T 3p9d_E 188 LGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQM---PKCVLPKEGS 264 (562)
T ss_dssp HSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSC---CC-----TTC
T ss_pred cCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCc---Cccccccccc
Confidence 999999999999999999999998753 2 68899999999999999999999999999999985 7777
Q ss_pred eCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeec
Q 014593 236 LNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAG 315 (422)
Q Consensus 236 ~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~ 315 (422)
+|++|+++++++++.+++.++++.++++++++++.+.|++++++++++|++.|++|||++++|++.+++||.++||++++
T Consensus 265 ~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~ 344 (562)
T 3p9d_E 265 DGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVR 344 (562)
T ss_dssp SSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEE
T ss_pred ccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECC--EEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHH
Q 014593 316 RVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLH 393 (422)
Q Consensus 316 ~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~--~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~ 393 (422)
++++++|+|||++|||+++++++++++++||+|+.|+++++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++
T Consensus 345 ~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~ 424 (562)
T 3p9d_E 345 WVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALH 424 (562)
T ss_dssp CCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHH
T ss_pred ccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999985 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 394 DAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 394 dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
|||+++|+++++|++|||||++|+++|+
T Consensus 425 DAL~~~r~av~~g~iVpGGGa~e~~~s~ 452 (562)
T 3p9d_E 425 DSLCVVRNLVKDSRVVYGGGAAEVTMSL 452 (562)
T ss_dssp HHHHHHHHHHHSCCEEETTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcHHHHHHHH
Confidence 9999999999999999999999999986
No 18
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=4.5e-91 Score=720.49 Aligned_cols=405 Identities=24% Similarity=0.436 Sum_probs=387.1
Q ss_pred hhhhhcccccccccc-HHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHH
Q 014593 7 PQIILLKEGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (422)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~ 85 (422)
+...+|+++.++++| .+++.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 9 ~~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~ 88 (568)
T 3p9d_H 9 PNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMA 88 (568)
T ss_dssp CCCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHH
T ss_pred chhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHH
Confidence 567889999988888 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhccccc--CCChHHHHHHHHHHHh
Q 014593 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIE--GQSLEEKKRLLSKCAA 163 (422)
Q Consensus 86 ~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~--~~~~~~~~~~l~~va~ 163 (422)
|++||+++||||||++|||++||+++.+++.+|+||+.|++||++|++.++++|+++++++. ..+ ++.|.++|+
T Consensus 89 a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~----~~~l~~va~ 164 (568)
T 3p9d_H 89 TEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKND----KNELLKMIK 164 (568)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCT----THHHHHHHH
T ss_pred HHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCC----HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998762 223 578999999
Q ss_pred HhhccccccchhHHHHHHHHHHHHhcCCC--------C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcce
Q 014593 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDG--------D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234 (422)
Q Consensus 164 tsl~sk~~~~~~~~l~~lv~~ai~~v~~~--------~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~ 234 (422)
||++||+.+++ +.|+++++||+.+++++ + |+++|+|++++|++++||++++|++|++++. .||++
T Consensus 165 tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~-----~m~~~ 238 (568)
T 3p9d_H 165 PVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE-----GHVKS 238 (568)
T ss_dssp HHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS-----SGGGS
T ss_pred HHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc-----CCcEE
Confidence 99999999887 89999999999999763 1 5678999999999999999999999999874 37899
Q ss_pred ee---CceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCc
Q 014593 235 FL---NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI 311 (422)
Q Consensus 235 ~~---n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I 311 (422)
++ ||||++++++|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++||
T Consensus 239 i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI 318 (568)
T 3p9d_H 239 LSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGI 318 (568)
T ss_dssp CCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTC
T ss_pred EecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCe
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCC--CCceEEEEEecCCHHHHHHHH
Q 014593 312 FCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--SGRTATIVLRGGADQFIEEAE 389 (422)
Q Consensus 312 ~~v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~--~~~~~Till~g~~~~~l~e~~ 389 (422)
++++++++.+|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||+ ++++|||+|||+|+.+++|.|
T Consensus 319 ~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~e 398 (568)
T 3p9d_H 319 LVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIE 398 (568)
T ss_dssp EEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 789999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEecCCHHHHhhhc
Q 014593 390 RSLHDAIMIVRRATK--NSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 390 ~~i~dal~~~~~~~~--~~~vv~GGG~~E~~ls~ 421 (422)
|+++|||+++|++++ ++++|||||++|++||+
T Consensus 399 r~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~ 432 (568)
T 3p9d_H 399 RAIDDGVAAVKGLMKPSGGKLLPGAGATEIELIS 432 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHH
Confidence 999999999999999 99999999999999986
No 19
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=4.3e-91 Score=718.95 Aligned_cols=405 Identities=25% Similarity=0.441 Sum_probs=387.5
Q ss_pred hhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhc
Q 014593 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQ 89 (422)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~ 89 (422)
.++++++++.+|.+|+.+|+.||++|++++||||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++|
T Consensus 4 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 83 (546)
T 3p9d_F 4 QLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQ 83 (546)
T ss_dssp CSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHH
T ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccC--CChHHHHHHHHHHHhHhhc
Q 014593 90 DSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEG--QSLEEKKRLLSKCAATTLS 167 (422)
Q Consensus 90 ~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~--~~~~~~~~~l~~va~tsl~ 167 (422)
|+++||||||++|||++||++|.+++++|+||+.|++||++|++.++++|++++++++. .+ ++.|.++|+||++
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~----~~~L~~vA~tsl~ 159 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSND----REFLLQVARSSLL 159 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTT----CHHHHHHHHHHTC
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccC----HHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998864 22 5789999999999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCC---C-CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEE
Q 014593 168 SKLIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLL 243 (422)
Q Consensus 168 sk~~~~~~~~l~~lv~~ai~~v~~~---~-~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~ 243 (422)
||+.+.+.+.|+++++||+..+.+. + |+++|++++++|++..||++++|++|++++.||+ ||++++||||+++
T Consensus 160 sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~~en~kIll~ 236 (546)
T 3p9d_F 160 TKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD---MPTRVKNAYVLIL 236 (546)
T ss_dssp STTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSS---SCSSBCSCCCCEE
T ss_pred CCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccccccc---CcceecCceEEEe
Confidence 9999999999999999999988631 2 7899999999999999999999999999999986 6999999999999
Q ss_pred eeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CeEEEecCCccHHHHHHHHhCCcee
Q 014593 244 NIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSG----------AKVVLSRLAIGDLATQYFADRDIFC 313 (422)
Q Consensus 244 ~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~----------~~lvi~~~~i~~~~~~~l~~~~I~~ 313 (422)
+|+|++++++.++++.++++++++.+++.|++++++.+++|...+ +.||+++++|++.+++||.++||++
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~ 316 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILA 316 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEE
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCee
Confidence 999999999999999999999999999999999999999998754 2399999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHH
Q 014593 314 AGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLH 393 (422)
Q Consensus 314 v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~ 393 (422)
++++++++|+|||++|||++++++++++++.||+|+.|+++++++++|++|+||++++.|||+|||+|+.+++|.||+++
T Consensus 317 vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~ 396 (546)
T 3p9d_F 317 LRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVR 396 (546)
T ss_dssp ECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 394 DAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 394 dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
|||+++|+++++|++|||||++|+++|+
T Consensus 397 DAl~~~r~av~~~~iVpGGGa~e~~~s~ 424 (546)
T 3p9d_F 397 DGLRAVANVLKDKNIIPGAGAFYIALSR 424 (546)
T ss_dssp HHHHHHHHHTTSCCEEETTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEeCCCHHHHHHHH
Confidence 9999999999999999999999999986
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.5e-89 Score=697.43 Aligned_cols=398 Identities=26% Similarity=0.424 Sum_probs=379.7
Q ss_pred cccccccc-HHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccc
Q 014593 14 EGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (422)
Q Consensus 14 ~~~~~~~~-~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~ 92 (422)
+++++++| .+++.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46778899 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcc--cccCCChHHHHHHHHHHHhHhhcccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAK--SIEGQSLEEKKRLLSKCAATTLSSKL 170 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~--~v~~~~~~~~~~~l~~va~tsl~sk~ 170 (422)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++ +.+..+ ++.|.++|+||++||.
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~----~~~l~~va~tsl~sK~ 156 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD----VDEVSSLLHTSVMSKQ 156 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC----HHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999854 334333 6889999999999998
Q ss_pred ccchhHHHHHHHHHHHHhcCCCC---CccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeec
Q 014593 171 IGGEKEFFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (422)
Q Consensus 171 ~~~~~~~l~~lv~~ai~~v~~~~---~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (422)
.+ +++.|+++++||+.++++++ |.++|+|.++.|+++.||++++|++|+++|.+ ||++++||+|+++++|+
T Consensus 157 ~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-----~~~~~~n~kI~ll~~~l 230 (512)
T 3iyg_Q 157 YG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-----DVTSVKDAKIAVYSCPF 230 (512)
T ss_pred cc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-----CCcccccCceEEEeccc
Confidence 65 68899999999999998753 67889999999999999999999999999864 58999999999999999
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHH
Q 014593 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (422)
Q Consensus 248 ~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~ 327 (422)
++.+++.++++.+++++++.++.+.|++++++++++|++.|++||+++++|++.+++||+++||++++++++.+|+|||+
T Consensus 231 e~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~ 310 (512)
T 3iyg_Q 231 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCK 310 (512)
T ss_pred ccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCC-CCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 014593 328 ATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP-SGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (422)
Q Consensus 328 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~-~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~ 406 (422)
+|||+++++++++++++||+|+.|++.++|+++|++|++|+ ++++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 311 ~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 311 TVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred HhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999997 47899999999999999999999999999999999999
Q ss_pred cEEecCCHHHHhhhc
Q 014593 407 TVVAGGGAIDVRFYH 421 (422)
Q Consensus 407 ~vv~GGG~~E~~ls~ 421 (422)
++|||||++|+++|+
T Consensus 391 ~iVpGGGa~e~~~s~ 405 (512)
T 3iyg_Q 391 RLVPGGGATEIELAK 405 (512)
T ss_pred CEecCCcHHHHHHHH
Confidence 999999999999986
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.3e-90 Score=713.10 Aligned_cols=407 Identities=36% Similarity=0.556 Sum_probs=389.4
Q ss_pred hhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeC-CCCCeEEeccHHHHHhhccccCchhHHHHHHHHh
Q 014593 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHD-DKGTVTISNDGATIMKLLDIVHPAAKILVDIAKS 88 (422)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~-~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~ 88 (422)
.+++++++..+|.++|.+|+.||..|++++||||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|++
T Consensus 4 ~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~ 83 (527)
T 3p9d_B 4 QIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKV 83 (527)
T ss_dssp CSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHH
T ss_pred ehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred cccccCCChhHHHHHHHHHHHHHHhHHhc-CCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhc
Q 014593 89 QDSEVGDGTTTVVLLAAEFLREAKPFIED-GVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLS 167 (422)
Q Consensus 89 ~~~~~GDGttt~vlL~~~ll~~a~~li~~-gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~ 167 (422)
||+++||||||++|||++||+++.+++.+ |+||+.|++||++|++.++++|++++++++.+ ++.+++.|.++|+||++
T Consensus 84 qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 84 QDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHD-KTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-HHHHHHHHHHHHHHHHT
T ss_pred hHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCc-chhhHHHHHHHHHhccc
Confidence 99999999999999999999999999999 99999999999999999999999999988753 22346899999999999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeec
Q 014593 168 SKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (422)
Q Consensus 168 sk~~~~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (422)
||+.++|++.|+++++||+.+++++.|+++|+|.++.|++..||++++|++|+++|.||+ |++++||||++++++|
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~----p~~~~n~kIlll~~~l 238 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ----PKRIENAKILIANTTL 238 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC----CSCCSSCEEEEECSCS
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC----CeeeecceEEEecccc
Confidence 999999999999999999999987657788999999999999999999999999999986 7889999999999999
Q ss_pred cccccc-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHH
Q 014593 248 ELKSEK-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVA 326 (422)
Q Consensus 248 ~~~~~~-~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia 326 (422)
++++++ +++++.++++++++++.++|++++++.+++|++.|++||+++++|++.+++||.++||++++++++.+|+|+|
T Consensus 239 e~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia 318 (527)
T 3p9d_B 239 DTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLA 318 (527)
T ss_dssp SCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHH
T ss_pred ccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHH
Confidence 999998 5888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 014593 327 AATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (422)
Q Consensus 327 ~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~ 406 (422)
++|||++++++++++++.||+|+.|+++++++++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 319 ~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g 398 (527)
T 3p9d_B 319 LVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKET 398 (527)
T ss_dssp HHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCC
T ss_pred HHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEecCCHHHHhhhc
Q 014593 407 TVVAGGGAIDVRFYH 421 (422)
Q Consensus 407 ~vv~GGG~~E~~ls~ 421 (422)
++|||||++|+++|+
T Consensus 399 ~iVpGGGa~e~~~s~ 413 (527)
T 3p9d_B 399 RTVLGGGCAEMVMSK 413 (527)
T ss_dssp CEEETTTHHHHHHHH
T ss_pred CcccCCcHHHHHHHH
Confidence 999999999999985
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.5e-82 Score=648.82 Aligned_cols=364 Identities=34% Similarity=0.572 Sum_probs=287.4
Q ss_pred EeeCCCCCeEEeccHHHHHhhccccCchhHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHH
Q 014593 51 LIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRN 130 (422)
Q Consensus 51 mi~~~~g~~~iTndg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~ 130 (422)
||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccccchhHHHHHHHHHHHHhcCCC--C----C-ccceeeeee
Q 014593 131 ASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDG--D----R-LNMIGIKKV 203 (422)
Q Consensus 131 a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~lv~~ai~~v~~~--~----~-~~~I~i~~i 203 (422)
|++.++++|+++++|++..+ ++.|.++|+|||+||+.++|++.|+++++||+.+++++ . | .++|+|+++
T Consensus 81 A~~~a~~~L~~~s~~v~~~d----~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDD----EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTC----HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCc----HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 99999999999999987655 68999999999999999999999999999999999754 1 4 678999999
Q ss_pred cCCCccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 014593 204 PGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDK 283 (422)
Q Consensus 204 ~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~ 283 (422)
+|++++||++++|++|+++|.||+| |++++||||++++++|++++++.++++.++++++++++.++|++++++++++
T Consensus 157 ~G~~~~ds~lv~G~v~dk~~~~~~m---~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~ 233 (500)
T 3aq1_B 157 AGGSIDDSELIDGLVIDKERSHPNM---PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEK 233 (500)
T ss_dssp ESSCGGGCEEESEEEESCCCSSTTS---CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHH
T ss_pred cCCCccceEEEeeeEEeecCCCCCC---cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999985 8999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEE
Q 014593 284 CVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363 (422)
Q Consensus 284 i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~ 363 (422)
|++.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++
T Consensus 234 I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~ 313 (500)
T 3aq1_B 234 VIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTY 313 (500)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEE
T ss_pred HHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 364 ~~~~~~~~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
|+||++++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|+++|+
T Consensus 314 ~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~ 371 (500)
T 3aq1_B 314 VTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSL 371 (500)
T ss_dssp EEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHH
T ss_pred EECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.4e-76 Score=604.34 Aligned_cols=360 Identities=22% Similarity=0.384 Sum_probs=332.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCc----hhHHHHHHHHhcccc
Q 014593 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (422)
Q Consensus 17 ~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 92 (422)
+..+|.++|.+|+.||..|+++++|||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++||++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 4568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhcccccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~ 172 (422)
+||||||++||+++||+++.+++++|+||..|++||++|++.+++.|+++++|++ + ++.|.++|++|++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~----~e~l~~vA~iS~~----- 152 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS--D----SKAIAQVGTISAN----- 152 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC--S----HHHHHHHHHHHTT-----
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC--C----HHHHHHHHHHhcc-----
Confidence 9999999999999999999999999999999999999999999999999999986 2 5789999999853
Q ss_pred chhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccce-eeEeeEEEeeccCCccc----cCCcceeeCceEEEEeeec
Q 014593 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (422)
Q Consensus 173 ~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L 247 (422)
+++.|+++++||+.+++++ +.|.|. +|+++++| ++++|++|+++|.|||| ++|++.++||+|+++|++|
T Consensus 153 -~~~~i~~liadAv~~V~~d---g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I 226 (547)
T 1kp8_A 153 -SDETVGKLIAEAMDKVGKE---GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI 226 (547)
T ss_dssp -SCHHHHHHHHHHHHHHCTT---SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE
T ss_pred -chhHHHHHHHHHHHHhCcC---CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC
Confidence 6789999999999999865 345554 78899998 99999999999999998 4588899999999999986
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCc------ee-----ecC
Q 014593 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI------FC-----AGR 316 (422)
Q Consensus 248 ~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I------~~-----v~~ 316 (422)
+ +.++ +.++++++.+.|++|||++++|++.++++|.+++| ++ +++
T Consensus 227 s-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 282 (547)
T 1kp8_A 227 S-------------NIRE-----------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGD 282 (547)
T ss_dssp C-------------CGGG-----------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHH
T ss_pred C-------------CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccccc
Confidence 4 4444 45788889999999999999999999999998654 44 459
Q ss_pred CCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccceEEEEEECCEEEEEEEcCCCC---------------------
Q 014593 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (422)
Q Consensus 317 v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~--------------------- 370 (422)
+++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||.++
T Consensus 283 ~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 359 (547)
T 1kp8_A 283 RRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY 359 (547)
T ss_dssp HHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHH
T ss_pred ccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchh
Confidence 99999999999999999996 89999999999999977 57999999999765
Q ss_pred --------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 371 --------------~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|+++|+
T Consensus 360 ~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~ 423 (547)
T 1kp8_A 360 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVAS 423 (547)
T ss_dssp HHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHH
Confidence 689999999999999999999999999999999999 99999999999985
No 24
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.8e-76 Score=606.79 Aligned_cols=362 Identities=22% Similarity=0.360 Sum_probs=303.6
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCc----hhHHHHHHHHhccc
Q 014593 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDS 91 (422)
Q Consensus 16 ~~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP----~~~ll~~~~~~~~~ 91 (422)
++..+|.++|.+|+.||..|+++++|||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++||+
T Consensus 4 k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 83 (545)
T 1iok_A 4 KEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTND 83 (545)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcc
Confidence 34678999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhccccc
Q 014593 92 EVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLI 171 (422)
Q Consensus 92 ~~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~ 171 (422)
++||||||++|||++||+++.+++.+|+||..|++||++|++.+++.|+++++|++. ++.|.++|++|++
T Consensus 84 e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~------~e~l~~va~iS~~---- 153 (545)
T 1iok_A 84 EAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVND------SSEVAQVGTISAN---- 153 (545)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCS------TTTTTHHHHHTTT----
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC------HHHHHHHHHhhcC----
Confidence 999999999999999999999999999999999999999999999999999999863 3578999998853
Q ss_pred cchhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccce-eeEeeEEEeeccCCccc----cCCcceeeCceEEEEeee
Q 014593 172 GGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIE 246 (422)
Q Consensus 172 ~~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~ 246 (422)
+++.|+++++||+.+++++ +.|.|. +|+++++| ++++|++|+++|.|||| ++|++.++||+|++++++
T Consensus 154 --~~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~ 226 (545)
T 1iok_A 154 --GESFIGQQIAEAMQRVGNE---GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKK 226 (545)
T ss_dssp --TCHHHHHHHHHHHHHHCTT---SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSC
T ss_pred --CchhHHHHHHHHHHHhccC---CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCC
Confidence 6789999999999999865 345554 78999998 99999999999999997 457888999999999998
Q ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCCc-----------eeec
Q 014593 247 LELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI-----------FCAG 315 (422)
Q Consensus 247 L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I-----------~~v~ 315 (422)
|+ ++++ +.++++++.+.|++|||++++|++.++++|..++| ++++
T Consensus 227 I~-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~ 282 (545)
T 1iok_A 227 LS-------------SLQP-----------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFG 282 (545)
T ss_dssp BC-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCT
T ss_pred cC-------------CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhh
Confidence 65 2333 45778889999999999999999999999998665 4456
Q ss_pred CCCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccceEEEEEECCEEEEEEEcCCCC--------------------
Q 014593 316 RVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG-------------------- 370 (422)
Q Consensus 316 ~v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~-------------------- 370 (422)
++++++|+|||++|||+++++ ++++++++||+|+.|++ ++++|++|+||+++
T Consensus 283 ~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~ 359 (545)
T 1iok_A 283 DRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSD 359 (545)
T ss_dssp THHHHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCS
T ss_pred hccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCch
Confidence 999999999999999999996 99999999999999987 57999999999764
Q ss_pred ---------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhcC
Q 014593 371 ---------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYHI 422 (422)
Q Consensus 371 ---------------~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~~ 422 (422)
++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|+++|++
T Consensus 360 ~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~ 425 (545)
T 1iok_A 360 YDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKV 425 (545)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGG
T ss_pred hhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHH
Confidence 689999999999999999999999999999999999 999999999999863
No 25
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-75 Score=600.87 Aligned_cols=359 Identities=24% Similarity=0.376 Sum_probs=329.9
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCc----hhHHHHHHHHhcccc
Q 014593 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (422)
Q Consensus 17 ~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 92 (422)
+..+|.++|.+|+.||..|+++++|||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++||++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 4568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhcccccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~ 172 (422)
+||||||++|||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ + ++.|.++|++|++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~----~~~l~~vA~iS~~----- 152 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE--D----RKAIEEVATISAN----- 152 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--S----HHHHHHHHHHHHT-----
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--C----HHHHHHhhhhhcC-----
Confidence 9999999999999999999999999999999999999999999999999999986 2 5789999999853
Q ss_pred chhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccce-eeEeeEEEeeccCCccc----cCCcceeeCceEEEEeeec
Q 014593 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (422)
Q Consensus 173 ~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L 247 (422)
++.|+++++||+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| ++|++.++||+|++++++|
T Consensus 153 --~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 225 (543)
T 1we3_A 153 --DPEVGKLIADAMEKVGKE---GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV 225 (543)
T ss_dssp --CHHHHHHHHHHHHTTCTT---SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCB
T ss_pred --CHHHHHHHHHHHHHhCcC---CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCc
Confidence 688999999999999865 345554 78899998 99999999999999998 4578889999999999975
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhC------Cceee-----cC
Q 014593 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR------DIFCA-----GR 316 (422)
Q Consensus 248 ~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~------~I~~v-----~~ 316 (422)
+ +.++ +.++++++++.|++|||++++|++.++++|..+ +|+++ ++
T Consensus 226 s-------------~~~~-----------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 281 (543)
T 1we3_A 226 S-------------NVRE-----------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGD 281 (543)
T ss_dssp C-------------CHHH-----------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHH
T ss_pred C-------------CHHH-----------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhh
Confidence 3 4444 467889999999999999999999999999975 44554 48
Q ss_pred CCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccceEEEEEECCEEEEEEEcCCCC---------------------
Q 014593 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (422)
Q Consensus 317 v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~--------------------- 370 (422)
+++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||.++
T Consensus 282 ~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 358 (543)
T 1we3_A 282 RRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEY 358 (543)
T ss_dssp HHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHH
T ss_pred hhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchh
Confidence 89999999999999999996 89999999999999977 57899999999764
Q ss_pred --------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhc
Q 014593 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYH 421 (422)
Q Consensus 371 --------------~~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~ 421 (422)
+.|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|+++|+
T Consensus 359 ~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~ 422 (543)
T 1we3_A 359 AREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAIS 422 (543)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHH
Confidence 689999999999999999999999999999999999 99999999999985
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7e-75 Score=593.05 Aligned_cols=361 Identities=24% Similarity=0.352 Sum_probs=264.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCccceEeeCCCCCeEEeccHHHHHhhccccCch----hHHHHHHHHhcccc
Q 014593 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSE 92 (422)
Q Consensus 17 ~~~~~~~~~~~n~~a~~~l~~iv~tslGP~G~~kmi~~~~g~~~iTndg~tIl~~l~~~hP~----~~ll~~~~~~~~~~ 92 (422)
+..+|.++|.+|+.|+..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++||++
T Consensus 4 ~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e 83 (546)
T 3rtk_A 4 TIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDV 83 (546)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC--
T ss_pred eeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhh
Confidence 45689999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHhHHhcCCChHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHhHhhcccccc
Q 014593 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (422)
Q Consensus 93 ~GDGttt~vlL~~~ll~~a~~li~~gi~p~~I~~g~~~a~~~~l~~l~~~s~~v~~~~~~~~~~~l~~va~tsl~sk~~~ 172 (422)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.++|++|++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~----~e~L~~vA~iS~~----- 152 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--T----KEQIAATAAISAG----- 152 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--S----HHHHHHHHHHHHT-----
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--C----hHHHHhHeEEeCC-----
Confidence 9999999999999999999999999999999999999999999999999999887 3 5789999999864
Q ss_pred chhHHHHHHHHHHHHhcCCCCCccceeeeeecCCCccceeeEeeEEEeeccCCccc----cCCcceeeCceEEEEeeecc
Q 014593 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELE 248 (422)
Q Consensus 173 ~~~~~l~~lv~~ai~~v~~~~~~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L~ 248 (422)
++.++++++||+.+++++ +.|.|.+.. +...||++++|++|+++|.|||| ++|++.++||+|++++++|+
T Consensus 153 --~~~i~~liadAv~~V~~d---gvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs 226 (546)
T 3rtk_A 153 --DQSIGDLIAEAMDKVGNE---GVITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVS 226 (546)
T ss_dssp --CHHHHHHHHHHHHHSCTT---SEEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEEC
T ss_pred --chHHHHHHHHHHHHhccC---CceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccC
Confidence 568999999999999876 345554322 34468999999999999999998 46899999999999999753
Q ss_pred ccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCCccHHHHHHHHhCC------ceee-----cCC
Q 014593 249 LKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD------IFCA-----GRV 317 (422)
Q Consensus 249 ~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~------I~~v-----~~v 317 (422)
++++ +.++++++.+.|++|||++++|++.++++|..++ +.++ ++.
T Consensus 227 -------------~~~~-----------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~ 282 (546)
T 3rtk_A 227 -------------TVKD-----------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDR 282 (546)
T ss_dssp -------------CSTT-----------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHH
T ss_pred -------------CHHH-----------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccccccc
Confidence 4444 4567899999999999999999999999998643 3443 455
Q ss_pred CHHHHHHHHHHhCCeEce-----eccCCCCCCccccceEEEEEECCEEEEEEEcCCCCc---------------------
Q 014593 318 AEEDLLRVAAATGGTVQT-----SVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGR--------------------- 371 (422)
Q Consensus 318 ~~~~l~~ia~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~--------------------- 371 (422)
++++|+|||++|||++++ ++++++++.||+|+.|++ +++++++|+||.+++
T Consensus 283 rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i---~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (546)
T 3rtk_A 283 RKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVV---TKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYD 359 (546)
T ss_dssp HHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred chhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEE---cCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhh
Confidence 689999999999999999 689999999999999974 889999999997643
Q ss_pred --------------eEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEecCCHHHHhhhcC
Q 014593 372 --------------TATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDVRFYHI 422 (422)
Q Consensus 372 --------------~~Till~g~~~~~l~e~~~~i~dal~~~~~~~~~~~vv~GGG~~E~~ls~~ 422 (422)
+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|+++|++
T Consensus 360 ~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~ 423 (546)
T 3rtk_A 360 REKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPT 423 (546)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGG
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHH
Confidence 89999999999999999999999999999999999 999999999999863
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.6e-40 Score=293.50 Aligned_cols=173 Identities=26% Similarity=0.467 Sum_probs=150.3
Q ss_pred ccceeeEeeEEEeeccCCccccCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014593 208 MRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQS 287 (422)
Q Consensus 208 ~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~ 287 (422)
++||++++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.++|++++++.+++|++.
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~ 77 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQL 77 (178)
T ss_dssp --CCSEEEEEEESCCCSSTT---SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEEEeccccCCC---CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 36899999999999999865 699999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCeEceeccCCCCCCccc-cceEEEEEECCEEEEEEEc
Q 014593 288 GAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSG 366 (422)
Q Consensus 288 ~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~ 366 (422)
|+|||+++++|+|.+++||.++||++++++++++|+|||++|||++++++++++++.||+ |+.|+++++|+++|++|+|
T Consensus 78 g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 78 KPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp CCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCceEEEEEecCCHH
Q 014593 367 CPSGRTATIVLRGGADQ 383 (422)
Q Consensus 367 ~~~~~~~Till~g~~~~ 383 (422)
|++++.|||+|||++..
T Consensus 158 c~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 158 CKDPKACTILLRGASHH 174 (178)
T ss_dssp ESSTTSCEEEEEC----
T ss_pred CCCCCEEEEEEECCCcc
Confidence 99999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=3.4e-35 Score=254.29 Aligned_cols=154 Identities=32% Similarity=0.566 Sum_probs=148.3
Q ss_pred EeeEEEeeccCCccccCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Q 014593 214 VNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293 (422)
Q Consensus 214 i~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lvi 293 (422)
++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.++|++++++.+++|++.|++||+
T Consensus 1 i~Gvv~~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl 77 (159)
T 1ass_A 1 MSGIVIDKEKVHSK---MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 77 (159)
T ss_dssp CCCEEESCCCSCTT---SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CceEEEecccCCCC---CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEE
Confidence 47999999999875 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCeEceeccCCCCCCccccceEEEEEECCEEEEEEEcCCCC
Q 014593 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG 370 (422)
Q Consensus 294 ~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~ 370 (422)
++++|+|.+++||.++||++++++++++|+|||++|||++++++++++++.||+|+.|+++++|+++|++|+||++.
T Consensus 78 ~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 78 CQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp ESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred ECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999764
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.42 E-value=9.3e-13 Score=113.87 Aligned_cols=147 Identities=22% Similarity=0.310 Sum_probs=110.3
Q ss_pred eeeEeeEEEeeccCCccc----cCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q 014593 211 SFLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQ 286 (422)
Q Consensus 211 s~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~ 286 (422)
.++++|+.||++|.|||| ++|...++||+||+++.+| ++..+ +.+.++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKI-------------SSLPD-----------LLPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEE-------------CCHHH-----------HHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCcc-------------CCHHH-----------HHHHHHHHHH
Confidence 357899999999999999 3677899999999999886 45544 6788888888
Q ss_pred cCCeEEEecCCccHHHHHHHHh---CC---ceee-----cCCCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccce
Q 014593 287 SGAKVVLSRLAIGDLATQYFAD---RD---IFCA-----GRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEH 350 (422)
Q Consensus 287 ~~~~lvi~~~~i~~~~~~~l~~---~~---I~~v-----~~v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~ 350 (422)
.+.+|+|.+.+|+..++..|.- +| +.++ +.-++..|++||.+||+++++. +++++.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 8888999999999988776552 22 3333 4556888999999999999984 67777889999999
Q ss_pred EEEEEECCEEEEEEEcCCCCceEEEEE-ecCCHHHHHHHHHHHHHHHH
Q 014593 351 FEERQVGNERFNIFSGCPSGRTATIVL-RGGADQFIEEAERSLHDAIM 397 (422)
Q Consensus 351 v~~~~~g~~~~~~~~~~~~~~~~Till-~g~~~~~l~e~~~~i~dal~ 397 (422)
+.+. . --|.++ ++.++..+++.-..+...+.
T Consensus 138 v~vt---k-------------d~T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 138 VVVS---K-------------DDTVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEC---S-------------SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEc---C-------------CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 8662 1 234444 34566666655555554443
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.40 E-value=7.8e-13 Score=109.08 Aligned_cols=114 Identities=24% Similarity=0.326 Sum_probs=93.7
Q ss_pred eEEEeeccCCccc----cCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 014593 216 GVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKV 291 (422)
Q Consensus 216 Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~l 291 (422)
|+.||++|.|||| ++|...++||+||+++.+| ++..+ +.+.++++.+.+.+|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------llP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV-------------SNVRE-----------LLPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEE-------------CCHHH-----------HHHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccc-------------cCHHH-----------HHHHHHHHHHHCCCE
Confidence 8999999999999 5678889999999999886 45544 778889988988889
Q ss_pred EEecCCccHHHHHHHHh---CC---cee-----ecCCCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccceEEE
Q 014593 292 VLSRLAIGDLATQYFAD---RD---IFC-----AGRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEE 353 (422)
Q Consensus 292 vi~~~~i~~~~~~~l~~---~~---I~~-----v~~v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~ 353 (422)
+|.+.+|+..++..|.- +| +.+ |+..++..|++||.+||+++++. +++.+.++||+|+++.+
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~v 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEE
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEE
Confidence 99999999988876652 33 233 35557889999999999999974 56667788999999876
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.37 E-value=4.9e-12 Score=109.60 Aligned_cols=143 Identities=20% Similarity=0.281 Sum_probs=107.7
Q ss_pred eeEEEeeccCCccc----cCCcceeeCceEEEEeeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 014593 215 NGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAK 290 (422)
Q Consensus 215 ~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L~~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~ 290 (422)
+|+.||++|.|||| ++|...++||+||+++.+| ++..+ +.+.++++.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKI-------------SNIRE-----------LLPVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEE-------------CCHHH-----------HHHHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCcc-------------CCHHH-----------HHHHHHHHHHhCCC
Confidence 59999999999999 4577889999999999986 35544 77888999999989
Q ss_pred EEEecCCccHHHHHHHHh---CC---ceee-----cCCCHHHHHHHHHHhCCeEcee-----ccCCCCCCccccceEEEE
Q 014593 291 VVLSRLAIGDLATQYFAD---RD---IFCA-----GRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEER 354 (422)
Q Consensus 291 lvi~~~~i~~~~~~~l~~---~~---I~~v-----~~v~~~~l~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~ 354 (422)
|+|.+.+|+..++..|.- +| +.++ +.-++..|++||.+||+++++. +++++.+.||+|+++.+.
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vt 148 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVIN 148 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEEC
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEc
Confidence 999999999988776552 22 3333 4455788999999999999984 567778899999998662
Q ss_pred EECCEEEEEEEcCCCCceEEEEEe-cCCHHHHHHHHHHHHHHHH
Q 014593 355 QVGNERFNIFSGCPSGRTATIVLR-GGADQFIEEAERSLHDAIM 397 (422)
Q Consensus 355 ~~g~~~~~~~~~~~~~~~~Till~-g~~~~~l~e~~~~i~dal~ 397 (422)
+ --|.++. +.++..+++.-..+...+.
T Consensus 149 -------------k---d~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 149 -------------K---DTTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp -------------S---SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred -------------C---CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1 2344444 4566666665555555443
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=68.24 E-value=10 Score=30.68 Aligned_cols=52 Identities=19% Similarity=0.150 Sum_probs=39.2
Q ss_pred HHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 280 ~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
..+.|.+.++++||+. ++.+-+...|.++||.++.....+.-+.|.....+.
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4455677899999997 689999999999999999866554445555555443
No 33
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=65.59 E-value=16 Score=28.76 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=38.7
Q ss_pred HHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 280 ~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
..+.|.+.++++|+|. ++++-+...|.++||.++.......-+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4455668899999998 589999999999999998765544445555555444
No 34
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=65.04 E-value=12 Score=29.27 Aligned_cols=53 Identities=30% Similarity=0.304 Sum_probs=39.2
Q ss_pred HHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 279 ~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
...+.|.+.++++|++. ++++-+...|.++||.++.....+.-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 44556677899999997 689999999999999999765544444455554443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=62.35 E-value=15 Score=28.75 Aligned_cols=51 Identities=22% Similarity=0.153 Sum_probs=37.3
Q ss_pred HHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCH-HHHHHHHHHhCC
Q 014593 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAE-EDLLRVAAATGG 331 (422)
Q Consensus 280 ~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~-~~l~~ia~~tGa 331 (422)
..+.|.+.++++|+|. ++++-+...|.++||-++..... ..-+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4455667899999998 68999999999999999986554 333444444433
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=52.23 E-value=24 Score=28.33 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=36.5
Q ss_pred HHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 279 ~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
...+.|.+.++++||+. ++.+-+...|.. ||.++.......-+.|.....+
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G 120 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEG 120 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhC
Confidence 34455667899999997 689999999999 9999976553333444444444
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=51.73 E-value=20 Score=27.66 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=38.0
Q ss_pred HHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 280 ~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
..+.+.+.++++|++. ++++-+...|.++||.++.....+.-+.|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 3345667899999997 588888999999999998765544445555554443
No 38
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=40.80 E-value=52 Score=23.78 Aligned_cols=51 Identities=14% Similarity=0.061 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
+...+.+.+..+.+|+.+.+.++.. ..++.+++|.++.--++.+|.+ ++|-
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~eLG~---a~Gk 71 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGK---ACGI 71 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHH---HHTC
T ss_pred HHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHHHH---HhCC
Confidence 3445556666789999999998743 3456789999887666666554 5553
No 39
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=38.05 E-value=57 Score=24.55 Aligned_cols=48 Identities=10% Similarity=0.163 Sum_probs=34.9
Q ss_pred HHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
+.+.+.++++|+|. ++++-+...|.++ |-++.....+.-+.|.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 44566899999996 6899999999999 999876554444444444433
No 40
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=34.45 E-value=88 Score=24.42 Aligned_cols=47 Identities=11% Similarity=-0.040 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCeEEEecCCccHH-----HHHHHHhCCceeecCCCHHHHHH
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDL-----ATQYFADRDIFCAGRVAEEDLLR 324 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~-----~~~~l~~~~I~~v~~v~~~~l~~ 324 (422)
....+.|.+..+.+|+.+.++++. ...+|.+.+|..+..-++.+|.+
T Consensus 26 ~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 77 (121)
T 2lbw_A 26 KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGA 77 (121)
T ss_dssp HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHH
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHH
Confidence 344566666778899999999873 34567789999877667766665
No 41
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=34.28 E-value=65 Score=29.54 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=37.4
Q ss_pred HHHHhcCCeEEEecCCccHHHHHHHHhCCceeecC--CC------------------------HHHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGR--VA------------------------EEDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~--v~------------------------~~~l~~ia~~tGa~ 332 (422)
++|...+++|||.....++...+.|.+.||.++.- -. .+.++.++.++|..
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 56788899999987555566678888989877631 10 35688899999875
No 42
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=31.77 E-value=94 Score=27.79 Aligned_cols=51 Identities=6% Similarity=0.066 Sum_probs=35.6
Q ss_pred HHHHhcCCeEEEecCCc-cHHHHHHHHhCCceeecC---CC----HHHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLAI-GDLATQYFADRDIFCAGR---VA----EEDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i-~~~~~~~l~~~~I~~v~~---v~----~~~l~~ia~~tGa~ 332 (422)
++|...+++|||..... ++...+.|.+.||.++.- -. .+.++.++.++|..
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 56788899999986543 455667888888866532 12 34577888888864
No 43
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=31.49 E-value=85 Score=24.81 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCeEEEecCCccH-----HHHHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGD-----LATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~-----~~~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
....+.|.+..+.+|+.+.+.+| ....+|.+++|.++.--++.+| ..++|-
T Consensus 30 ~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~L---G~a~G~ 85 (126)
T 2xzm_U 30 HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASL---GEYLGH 85 (126)
T ss_dssp HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHH---HHHHTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHH---HHHHCC
Confidence 34455566677889999988874 3456778899998764444544 445553
No 44
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=30.85 E-value=88 Score=28.47 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=32.2
Q ss_pred HHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCC----HHHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA----EEDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~----~~~l~~ia~~tGa~ 332 (422)
++|..++|+|||.....++...+.|.+.+..++-... .+.++.|+.++|..
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 90 EKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 5567778888887655566666777777755443222 34467777777764
No 45
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=28.37 E-value=57 Score=28.72 Aligned_cols=51 Identities=10% Similarity=0.091 Sum_probs=31.1
Q ss_pred HHHHhcCCeEEEecCCccHHHHHHHHhCCceee--cCCC----HHHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA--GRVA----EEDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v--~~v~----~~~l~~ia~~tGa~ 332 (422)
++|...+++|||.....++...+.|.+.||.++ ..-. .+.++.++.++|..
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 456777888888765554555667777776543 2111 23466677777754
No 46
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=27.42 E-value=1e+02 Score=23.06 Aligned_cols=52 Identities=12% Similarity=-0.036 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
.+..+.+.+-.+.+||.+.+.++.. .+++..++|.++..-++.+|. .++|-.
T Consensus 24 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~eLG---~a~Gk~ 79 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQMLG---RAIGKH 79 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHH---HHTTSS
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHHHH---HHhCCc
Confidence 3445556666788999999998743 345668899888766666554 456653
No 47
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=27.38 E-value=68 Score=25.70 Aligned_cols=47 Identities=6% Similarity=-0.008 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCeEEEecCCccHH-----HHHHHHhCCceeecCCCHHHHHH
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDL-----ATQYFADRDIFCAGRVAEEDLLR 324 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~-----~~~~l~~~~I~~v~~v~~~~l~~ 324 (422)
....+.+.+..+.+|+.+.++++. ...+|.+.||..+.--++.+|.+
T Consensus 38 ~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 89 (134)
T 2ale_A 38 NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGR 89 (134)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHHH
T ss_pred hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHHH
Confidence 344555556667888888888773 34566777887665445554443
No 48
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.95 E-value=74 Score=29.62 Aligned_cols=51 Identities=10% Similarity=-0.059 Sum_probs=31.7
Q ss_pred HHHHhcCCeEEEecCCccHHHHHHHHhCCceeecC--C---C------HHHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGR--V---A------EEDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~--v---~------~~~l~~ia~~tGa~ 332 (422)
++|..++|+|||....-.+...+.+.+.||.++.- - . .+.++.++.++|..
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 55677788888876542334556667777765521 1 0 34577777777764
No 49
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=26.27 E-value=1.4e+02 Score=22.32 Aligned_cols=51 Identities=14% Similarity=-0.020 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeecCCCHHHHHHHHHHhCCe
Q 014593 279 DKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (422)
Q Consensus 279 ~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~~v~~~~l~~ia~~tGa~ 332 (422)
+..+.+.+-.+.+||.+.+.++.. .+++...+|.++...++.+|. .++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~eLG---~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAVLG---RSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHHHH---HHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHHHH---hhhCcc
Confidence 444556666788999999998743 345678999988776666554 466654
No 50
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=26.10 E-value=95 Score=27.14 Aligned_cols=52 Identities=13% Similarity=0.051 Sum_probs=36.3
Q ss_pred HHHHHhcCCeEEEecCCcc-HHHHHHHHhCCceeecC---CC----HHHHHHHHHHhCCe
Q 014593 281 LDKCVQSGAKVVLSRLAIG-DLATQYFADRDIFCAGR---VA----EEDLLRVAAATGGT 332 (422)
Q Consensus 281 v~~i~~~~~~lvi~~~~i~-~~~~~~l~~~~I~~v~~---v~----~~~l~~ia~~tGa~ 332 (422)
+++|...+++|||...... +...+.|.+.||.++.- -. .+.++.++.++|..
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 3667889999999876654 45567788888876531 12 23477888888865
No 51
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=25.55 E-value=1.2e+02 Score=26.40 Aligned_cols=51 Identities=8% Similarity=0.069 Sum_probs=33.7
Q ss_pred HHHHhcCCeEEEecCC-ccHHHHHHHHhCCceeec--CC--CH----HHHHHHHHHhCCe
Q 014593 282 DKCVQSGAKVVLSRLA-IGDLATQYFADRDIFCAG--RV--AE----EDLLRVAAATGGT 332 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~~-i~~~~~~~l~~~~I~~v~--~v--~~----~~l~~ia~~tGa~ 332 (422)
++|...+++|||.... .++...+.|.+.||.++. .. .. +.++.++.++|..
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 5677889999988654 345566778888876542 11 22 2467777888764
No 52
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=24.47 E-value=2.1e+02 Score=21.93 Aligned_cols=58 Identities=14% Similarity=0.094 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCCeEEEecCC--------ccHHHHHHHHhCCce----eecCC--CHHHHHHHHHHhCCeEce
Q 014593 277 IYDKLDKCVQSGAKVVLSRLA--------IGDLATQYFADRDIF----CAGRV--AEEDLLRVAAATGGTVQT 335 (422)
Q Consensus 277 l~~~v~~i~~~~~~lvi~~~~--------i~~~~~~~l~~~~I~----~v~~v--~~~~l~~ia~~tGa~ii~ 335 (422)
.+..++.+++.+. |++..++ .+..+..+|.+.||. ...++ ..+..+.+...+|..-++
T Consensus 5 ~~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP 76 (121)
T 3gx8_A 5 IRKAIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIP 76 (121)
T ss_dssp HHHHHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCC
Confidence 5677788888775 5555444 456788999999985 22233 334456666667764443
No 53
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=23.89 E-value=1.2e+02 Score=24.24 Aligned_cols=51 Identities=16% Similarity=0.012 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH-----HHHHHhCCceeecCCCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA-----TQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~-----~~~l~~~~I~~v~~v~~~~l~~ia~~tGa 331 (422)
....+.+.+..+.+|+.+.+.++.- ..+|.+++|.++..-++.+|. .++|-
T Consensus 47 ~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~eLG---~a~G~ 102 (135)
T 2aif_A 47 NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVALG---RACGV 102 (135)
T ss_dssp HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHHHH---HHhCC
Confidence 3445555566678888888888742 245667888887666665554 45554
No 54
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=23.16 E-value=1.9e+02 Score=21.62 Aligned_cols=51 Identities=16% Similarity=0.052 Sum_probs=35.4
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeec-CCCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAG-RVAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~-~v~~~~l~~ia~~tGa 331 (422)
.+..+.|.+-.+.+||.+.+.++.. ..++..++|.++. .-+..+|.. ++|-
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~---a~Gk 83 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGT---ACGK 83 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHH---HTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHH---HhCC
Confidence 4455666666788999999998743 3456678999885 666666554 6664
No 55
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.31 E-value=87 Score=27.25 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=20.9
Q ss_pred HHHHhcCCeEEEecC-CccHHHHHHHHhCCceee
Q 014593 282 DKCVQSGAKVVLSRL-AIGDLATQYFADRDIFCA 314 (422)
Q Consensus 282 ~~i~~~~~~lvi~~~-~i~~~~~~~l~~~~I~~v 314 (422)
++|...+++|||... ..++...+.|.+.||.++
T Consensus 51 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv 84 (245)
T 1n2z_A 51 ERIVALKPDLVIAWRGGNAERQVDQLASLGIKVM 84 (245)
T ss_dssp HHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEE
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEE
Confidence 456677788877742 344555566777776654
No 56
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=21.74 E-value=63 Score=29.31 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=32.6
Q ss_pred HHHHHHHhcCCeEEEecCCccHHHHHHHHhCCceeecCCC
Q 014593 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA 318 (422)
Q Consensus 279 ~~v~~i~~~~~~lvi~~~~i~~~~~~~l~~~~I~~v~~v~ 318 (422)
++++|....|++++++...-..++.++-.+.||+.++.++
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R 245 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSR 245 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEec
Confidence 5677788888888888888888888888888888877654
No 57
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=21.00 E-value=2.5e+02 Score=21.24 Aligned_cols=51 Identities=16% Similarity=0.053 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeecC-CCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAGR-VAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~~-v~~~~l~~ia~~tGa 331 (422)
....+.+.+-.+.+||.+.+.++.. ..++.+++|.++.. -++.+|. .++|-
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG---~a~G~ 82 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELG---AVCGK 82 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHH---HHhCC
Confidence 3445556666788999988887643 34566789987765 5666555 45554
No 58
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=20.20 E-value=2.3e+02 Score=21.26 Aligned_cols=51 Identities=14% Similarity=0.044 Sum_probs=35.4
Q ss_pred HHHHHHHHhcCCeEEEecCCccHHH----HHHHHhCCceeec-CCCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDLA----TQYFADRDIFCAG-RVAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~~----~~~l~~~~I~~v~-~v~~~~l~~ia~~tGa 331 (422)
++..+.|.+-.+.+||...+.++.. .+++..++|.++. .-+..+|. .++|-
T Consensus 28 ~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG---~A~Gk 83 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELG---TAVGK 83 (105)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHH---HHhCC
Confidence 4455666666788999999988743 4566788999984 55666554 46665
No 59
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=20.01 E-value=2.2e+02 Score=21.84 Aligned_cols=51 Identities=20% Similarity=0.027 Sum_probs=35.4
Q ss_pred HHHHHHHHhcCCeEEEecCCccHH----HHHHHHhCCceeecC-CCHHHHHHHHHHhCC
Q 014593 278 YDKLDKCVQSGAKVVLSRLAIGDL----ATQYFADRDIFCAGR-VAEEDLLRVAAATGG 331 (422)
Q Consensus 278 ~~~v~~i~~~~~~lvi~~~~i~~~----~~~~l~~~~I~~v~~-v~~~~l~~ia~~tGa 331 (422)
++.++.|.+-.+.+||.+.+.++. ..+++..++|.++.- -+..+|.+ ++|-
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~---A~Gk 87 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGT---ACGK 87 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHH---HHCT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHH---HhCC
Confidence 445566666678899999999874 345677899988875 55666554 5554
Done!