Query 014594
Match_columns 422
No_of_seqs 319 out of 2771
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 06:39:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014594.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014594hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03026 histidinol-phosphate 100.0 2E-57 4.3E-62 443.9 42.3 363 59-421 16-379 (380)
2 COG0079 HisC Histidinol-phosph 100.0 1.8E-57 4E-62 434.3 37.7 341 68-421 3-351 (356)
3 PRK01533 histidinol-phosphate 100.0 2E-53 4.3E-58 413.1 37.3 341 68-421 4-352 (366)
4 COG0436 Aspartate/tyrosine/aro 100.0 6.8E-53 1.5E-57 409.8 36.7 324 95-421 28-385 (393)
5 PRK01688 histidinol-phosphate 100.0 5.7E-52 1.2E-56 401.5 36.7 336 65-419 7-351 (351)
6 PRK03158 histidinol-phosphate 100.0 1.8E-51 4E-56 400.0 38.1 346 69-421 5-358 (359)
7 PRK14809 histidinol-phosphate 100.0 6.4E-51 1.4E-55 395.7 39.8 341 70-419 5-352 (357)
8 PRK05166 histidinol-phosphate 100.0 4.3E-50 9.3E-55 391.6 39.3 350 66-421 9-368 (371)
9 PRK04781 histidinol-phosphate 100.0 1.1E-49 2.4E-54 387.3 38.9 338 66-421 11-360 (364)
10 PRK07392 threonine-phosphate d 100.0 1.3E-49 2.8E-54 386.9 38.9 334 83-421 10-356 (360)
11 PRK04870 histidinol-phosphate 100.0 1E-49 2.3E-54 387.1 37.3 323 94-421 25-355 (356)
12 PRK02610 histidinol-phosphate 100.0 1.6E-49 3.4E-54 388.0 38.0 318 96-419 29-366 (374)
13 PRK14807 histidinol-phosphate 100.0 3.4E-49 7.3E-54 382.5 40.1 340 65-421 4-349 (351)
14 PRK04635 histidinol-phosphate 100.0 1.3E-49 2.8E-54 385.9 36.2 335 66-420 11-351 (354)
15 PRK06358 threonine-phosphate d 100.0 3.5E-49 7.6E-54 382.5 38.2 333 82-421 6-352 (354)
16 PRK02731 histidinol-phosphate 100.0 5.2E-49 1.1E-53 384.0 39.3 349 68-421 7-363 (367)
17 PRK08153 histidinol-phosphate 100.0 4.5E-49 9.8E-54 383.9 38.0 324 96-421 33-362 (369)
18 PRK00950 histidinol-phosphate 100.0 7.1E-49 1.5E-53 382.2 39.2 348 67-421 6-359 (361)
19 PRK09105 putative aminotransfe 100.0 5.1E-49 1.1E-53 383.1 36.8 321 94-421 42-367 (370)
20 PRK08056 threonine-phosphate d 100.0 7.4E-49 1.6E-53 380.8 37.5 336 80-421 5-352 (356)
21 KOG0633 Histidinol phosphate a 100.0 9E-50 2E-54 344.9 25.4 351 62-421 11-374 (375)
22 PRK05387 histidinol-phosphate 100.0 1.2E-48 2.6E-53 379.5 36.5 319 95-421 24-350 (353)
23 PRK07681 aspartate aminotransf 100.0 1.5E-48 3.3E-53 384.3 36.7 327 92-421 29-382 (399)
24 PRK14808 histidinol-phosphate 100.0 6.1E-48 1.3E-52 370.7 36.6 311 94-422 18-335 (335)
25 PRK03967 histidinol-phosphate 100.0 8.9E-48 1.9E-52 370.2 36.7 310 95-421 18-331 (337)
26 PRK07366 succinyldiaminopimela 100.0 6.6E-48 1.4E-52 378.7 35.0 327 93-422 28-385 (388)
27 PRK06290 aspartate aminotransf 100.0 1.6E-47 3.4E-52 376.8 37.6 325 93-420 42-401 (410)
28 PRK09147 succinyldiaminopimela 100.0 1.1E-47 2.4E-52 378.1 35.9 323 93-421 27-390 (396)
29 PRK03317 histidinol-phosphate 100.0 1.1E-47 2.5E-52 374.4 35.5 319 96-421 27-361 (368)
30 PRK08960 hypothetical protein; 100.0 1.1E-47 2.5E-52 376.8 35.1 326 93-421 30-381 (387)
31 PRK06425 histidinol-phosphate 100.0 3.2E-47 6.9E-52 365.8 36.7 305 96-421 17-330 (332)
32 PRK06959 putative threonine-ph 100.0 1.4E-47 3E-52 368.6 32.8 316 79-421 8-330 (339)
33 PRK09276 LL-diaminopimelate am 100.0 5.5E-47 1.2E-51 371.9 36.3 334 86-422 22-383 (385)
34 PRK06348 aspartate aminotransf 100.0 1.1E-46 2.4E-51 369.3 38.0 325 95-422 29-380 (384)
35 PRK08068 transaminase; Reviewe 100.0 3.6E-47 7.8E-52 373.5 34.3 327 93-422 30-384 (389)
36 PLN02187 rooty/superroot1 100.0 1.1E-46 2.4E-51 375.5 37.6 326 93-421 64-432 (462)
37 PRK06207 aspartate aminotransf 100.0 1.2E-46 2.6E-51 370.9 37.2 325 94-421 38-396 (405)
38 PLN00175 aminotransferase fami 100.0 2.7E-46 5.8E-51 368.9 39.6 325 95-422 54-408 (413)
39 TIGR03538 DapC_gpp succinyldia 100.0 6.8E-47 1.5E-51 372.0 34.5 323 93-421 26-389 (393)
40 TIGR01141 hisC histidinol-phos 100.0 2.4E-46 5.2E-51 362.4 37.2 322 94-418 18-345 (346)
41 PLN00143 tyrosine/nicotianamin 100.0 1.6E-46 3.4E-51 370.6 35.9 327 93-422 30-399 (409)
42 PRK13355 bifunctional HTH-doma 100.0 2.1E-46 4.5E-51 379.8 36.4 352 67-422 119-509 (517)
43 PRK07324 transaminase; Validat 100.0 1.2E-46 2.6E-51 367.2 33.2 331 88-422 19-365 (373)
44 PRK07908 hypothetical protein; 100.0 4.5E-46 9.7E-51 360.6 36.1 315 94-421 21-344 (349)
45 PRK03321 putative aminotransfe 100.0 3.1E-46 6.8E-51 362.3 35.0 319 95-421 22-348 (352)
46 TIGR03537 DapC succinyldiamino 100.0 3.8E-46 8.2E-51 361.1 35.0 323 97-422 2-348 (350)
47 TIGR03540 DapC_direct LL-diami 100.0 4.7E-46 1E-50 365.1 36.0 327 93-422 27-381 (383)
48 PLN00145 tyrosine/nicotianamin 100.0 7.9E-46 1.7E-50 367.0 37.2 326 94-422 51-419 (430)
49 PRK07337 aminotransferase; Val 100.0 6.8E-46 1.5E-50 364.5 36.4 330 90-422 25-384 (388)
50 PRK05942 aspartate aminotransf 100.0 5.9E-46 1.3E-50 365.4 35.9 327 92-421 32-386 (394)
51 PTZ00433 tyrosine aminotransfe 100.0 8.9E-46 1.9E-50 365.9 36.1 326 93-421 31-402 (412)
52 PLN02656 tyrosine transaminase 100.0 8.7E-46 1.9E-50 365.5 35.8 327 93-422 29-398 (409)
53 PRK09148 aminotransferase; Val 100.0 1.2E-45 2.5E-50 364.1 35.9 326 93-421 28-384 (405)
54 PRK15481 transcriptional regul 100.0 3.5E-46 7.7E-51 371.1 32.1 321 95-421 85-425 (431)
55 PRK05839 hypothetical protein; 100.0 8.5E-46 1.8E-50 361.5 34.2 323 85-421 13-368 (374)
56 PLN02450 1-aminocyclopropane-1 100.0 3.5E-46 7.6E-51 372.5 31.9 326 94-421 37-424 (468)
57 PRK12414 putative aminotransfe 100.0 1.9E-45 4E-50 360.5 35.6 325 95-422 29-382 (384)
58 PRK07682 hypothetical protein; 100.0 1.4E-45 2.9E-50 361.2 34.5 324 95-421 20-370 (378)
59 TIGR01264 tyr_amTase_E tyrosin 100.0 2.6E-45 5.6E-50 361.8 36.4 326 93-421 29-393 (401)
60 KOG0257 Kynurenine aminotransf 100.0 2.3E-46 4.9E-51 346.3 25.4 320 100-422 36-414 (420)
61 PRK08636 aspartate aminotransf 100.0 4.9E-45 1.1E-49 359.8 36.7 334 87-422 25-395 (403)
62 PLN02376 1-aminocyclopropane-1 100.0 9.8E-46 2.1E-50 370.5 31.2 328 94-422 45-433 (496)
63 PRK05664 threonine-phosphate d 100.0 6.8E-45 1.5E-49 349.2 35.0 311 83-421 8-325 (330)
64 PRK06108 aspartate aminotransf 100.0 8.2E-45 1.8E-49 356.4 36.0 324 95-421 24-376 (382)
65 PRK05957 aspartate aminotransf 100.0 1.3E-44 2.7E-49 355.2 36.5 325 95-421 27-379 (389)
66 PRK07550 hypothetical protein; 100.0 1.3E-44 2.9E-49 355.1 35.5 332 88-421 22-381 (386)
67 PRK07590 L,L-diaminopimelate a 100.0 7.8E-45 1.7E-49 359.0 33.1 317 94-421 33-405 (409)
68 TIGR01140 L_thr_O3P_dcar L-thr 100.0 3.1E-44 6.8E-49 344.7 35.8 322 80-419 2-330 (330)
69 PRK07865 N-succinyldiaminopime 100.0 1.9E-44 4.1E-49 351.3 34.4 324 84-422 16-363 (364)
70 PRK08912 hypothetical protein; 100.0 2.5E-44 5.3E-49 353.3 35.1 324 95-421 26-380 (387)
71 PRK08361 aspartate aminotransf 100.0 4.3E-44 9.3E-49 352.0 35.6 324 95-421 33-384 (391)
72 COG1168 MalY Bifunctional PLP- 100.0 2.8E-44 6E-49 329.4 31.1 330 89-421 17-380 (388)
73 PRK09082 methionine aminotrans 100.0 5E-44 1.1E-48 350.8 35.3 325 95-422 30-384 (386)
74 PRK09265 aminotransferase AlaT 100.0 1.3E-43 2.8E-48 349.9 37.5 326 93-421 31-395 (404)
75 PRK06855 aminotransferase; Val 100.0 8E-44 1.7E-48 353.4 36.1 329 92-422 29-424 (433)
76 PLN02607 1-aminocyclopropane-1 100.0 2.3E-44 5E-49 356.8 32.0 327 93-421 45-431 (447)
77 PRK07683 aminotransferase A; V 100.0 9.2E-44 2E-48 348.9 35.9 324 95-421 28-377 (387)
78 PTZ00377 alanine aminotransfer 100.0 3.9E-44 8.5E-49 360.3 34.1 327 93-421 44-469 (481)
79 TIGR03542 DAPAT_plant LL-diami 100.0 2.5E-44 5.5E-49 354.6 31.6 319 94-422 32-399 (402)
80 TIGR03539 DapC_actino succinyl 100.0 5.5E-44 1.2E-48 346.9 33.4 325 83-422 9-357 (357)
81 PRK07309 aromatic amino acid a 100.0 1.4E-43 3.1E-48 348.0 36.5 325 95-421 30-382 (391)
82 PRK08363 alanine aminotransfer 100.0 1.3E-43 2.8E-48 349.4 35.8 328 91-421 26-388 (398)
83 TIGR01265 tyr_nico_aTase tyros 100.0 2.3E-43 4.9E-48 347.9 36.5 326 93-421 29-395 (403)
84 PRK06107 aspartate aminotransf 100.0 3.2E-43 6.9E-48 346.7 37.1 325 94-421 32-394 (402)
85 PRK08354 putative aminotransfe 100.0 4.4E-43 9.5E-48 334.0 34.8 297 93-421 6-309 (311)
86 PRK07568 aspartate aminotransf 100.0 5.9E-43 1.3E-47 344.9 36.2 324 94-421 29-386 (397)
87 PRK05764 aspartate aminotransf 100.0 6.9E-43 1.5E-47 344.0 36.4 326 93-421 29-385 (393)
88 PRK06225 aspartate aminotransf 100.0 2.1E-42 4.6E-47 338.7 36.7 323 94-418 27-370 (380)
89 COG1167 ARO8 Transcriptional r 100.0 1.6E-42 3.4E-47 344.5 35.2 324 95-421 89-449 (459)
90 PRK08175 aminotransferase; Val 100.0 1.9E-42 4.2E-47 340.6 35.4 325 94-421 28-383 (395)
91 PRK07777 aminotransferase; Val 100.0 4.4E-42 9.6E-47 337.3 36.0 325 95-422 24-381 (387)
92 PRK09275 aspartate aminotransf 100.0 1.1E-42 2.3E-47 345.8 30.8 321 96-421 101-511 (527)
93 PRK06836 aspartate aminotransf 100.0 7.6E-42 1.6E-46 336.1 35.9 321 95-422 33-386 (394)
94 KOG0259 Tyrosine aminotransfer 100.0 4.8E-42 1E-46 312.1 31.4 325 95-422 61-428 (447)
95 PF00155 Aminotran_1_2: Aminot 100.0 3E-43 6.4E-48 343.0 24.8 324 96-421 2-363 (363)
96 PLN02672 methionine S-methyltr 100.0 1.1E-41 2.4E-46 357.4 36.0 327 93-421 695-1074(1082)
97 PLN02231 alanine transaminase 100.0 1.2E-40 2.7E-45 335.5 36.7 323 96-421 130-521 (534)
98 PLN02368 alanine transaminase 100.0 2.9E-41 6.4E-46 330.4 28.8 302 68-370 12-396 (407)
99 PRK09440 avtA valine--pyruvate 100.0 5.9E-41 1.3E-45 332.5 30.9 321 95-421 30-405 (416)
100 PTZ00376 aspartate aminotransf 100.0 1.4E-40 3E-45 328.1 33.0 313 95-420 29-399 (404)
101 PRK09257 aromatic amino acid a 100.0 4.2E-40 9E-45 324.1 33.4 314 95-421 26-392 (396)
102 TIGR03801 asp_4_decarbox aspar 100.0 4.2E-40 9E-45 326.9 31.6 321 96-421 95-510 (521)
103 PLN02397 aspartate transaminas 100.0 2.3E-39 5E-44 320.4 33.2 313 94-421 47-415 (423)
104 PRK08637 hypothetical protein; 100.0 4.5E-39 9.7E-44 315.8 32.2 305 111-421 23-380 (388)
105 KOG0256 1-aminocyclopropane-1- 100.0 2.1E-38 4.5E-43 290.9 26.1 298 124-422 115-456 (471)
106 cd00609 AAT_like Aspartate ami 100.0 9.2E-34 2E-38 274.3 33.6 321 98-421 1-348 (350)
107 TIGR03576 pyridox_MJ0158 pyrid 100.0 4.1E-32 8.8E-37 260.8 32.1 293 107-420 32-343 (346)
108 TIGR00858 bioF 8-amino-7-oxono 100.0 5.8E-32 1.3E-36 263.1 32.9 317 93-421 14-359 (360)
109 PRK10534 L-threonine aldolase; 100.0 5.7E-33 1.2E-37 267.4 24.5 305 97-420 1-329 (333)
110 PRK10874 cysteine sulfinate de 100.0 1.3E-31 2.8E-36 264.4 34.6 317 95-420 18-394 (401)
111 TIGR03392 FeS_syn_CsdA cystein 100.0 5.5E-31 1.2E-35 259.7 34.7 317 96-421 16-392 (398)
112 KOG0634 Aromatic amino acid am 100.0 1.4E-31 2.9E-36 248.1 27.2 295 124-421 94-460 (472)
113 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 8.6E-31 1.9E-35 255.4 31.4 280 131-421 53-365 (370)
114 TIGR01822 2am3keto_CoA 2-amino 100.0 2.6E-30 5.7E-35 254.5 33.0 317 93-419 36-384 (393)
115 cd06502 TA_like Low-specificit 100.0 2.1E-30 4.5E-35 250.1 30.6 306 103-420 4-337 (338)
116 cd06451 AGAT_like Alanine-glyo 100.0 5.5E-30 1.2E-34 249.0 33.6 312 104-420 5-353 (356)
117 PRK13238 tnaA tryptophanase/L- 100.0 4.8E-30 1E-34 254.5 32.4 331 80-421 21-430 (460)
118 PLN02721 threonine aldolase 100.0 3.1E-30 6.7E-35 250.4 30.5 311 96-420 6-348 (353)
119 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 4.5E-30 9.7E-35 249.9 30.9 306 106-421 10-359 (361)
120 PRK05958 8-amino-7-oxononanoat 100.0 1.2E-29 2.6E-34 249.1 33.8 317 93-420 37-383 (385)
121 TIGR01979 sufS cysteine desulf 100.0 8.8E-30 1.9E-34 251.6 31.6 319 94-421 16-398 (403)
122 PRK02948 cysteine desulfurase; 100.0 2.2E-30 4.7E-35 254.0 26.2 314 98-421 2-371 (381)
123 PRK09295 bifunctional cysteine 100.0 2.3E-29 4.9E-34 248.7 32.2 318 95-421 22-401 (406)
124 PRK06939 2-amino-3-ketobutyrat 100.0 2.3E-29 5.1E-34 248.1 31.7 319 93-421 40-387 (397)
125 PRK13392 5-aminolevulinate syn 100.0 1.4E-29 3.1E-34 250.4 29.6 316 95-421 46-394 (410)
126 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.4E-29 1.4E-33 245.0 32.6 311 97-417 18-396 (397)
127 PLN02855 Bifunctional selenocy 100.0 7.6E-29 1.6E-33 246.3 31.7 318 95-421 31-415 (424)
128 TIGR00707 argD acetylornithine 100.0 5.4E-29 1.2E-33 244.0 29.1 314 93-419 25-376 (379)
129 cd06454 KBL_like KBL_like; thi 100.0 4.7E-28 1E-32 234.7 31.4 315 97-421 3-348 (349)
130 PRK07179 hypothetical protein; 100.0 1.1E-27 2.3E-32 236.8 34.4 316 93-420 52-394 (407)
131 cd06453 SufS_like Cysteine des 100.0 3.1E-28 6.7E-33 238.2 29.9 279 131-417 45-372 (373)
132 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.8E-28 1.5E-32 236.8 32.0 316 93-419 31-376 (385)
133 PLN02822 serine palmitoyltrans 100.0 1.2E-27 2.6E-32 239.4 34.1 319 93-421 107-471 (481)
134 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1E-27 2.2E-32 232.9 32.4 308 104-420 5-353 (355)
135 PRK07049 methionine gamma-lyas 100.0 4.6E-28 9.9E-33 238.9 29.7 218 124-355 78-314 (427)
136 PRK02627 acetylornithine amino 100.0 2.5E-28 5.5E-33 240.7 26.6 317 92-421 36-388 (396)
137 PLN02409 serine--glyoxylate am 100.0 2.4E-27 5.2E-32 233.4 32.6 300 103-407 14-352 (401)
138 PRK13479 2-aminoethylphosphona 100.0 2.1E-27 4.5E-32 231.9 31.2 310 103-420 10-359 (368)
139 PRK03244 argD acetylornithine 100.0 9.8E-28 2.1E-32 236.5 29.0 314 92-420 40-390 (398)
140 PLN02483 serine palmitoyltrans 100.0 2.3E-27 5.1E-32 237.8 32.0 318 94-421 99-460 (489)
141 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.8E-27 1E-31 230.3 32.0 318 94-421 17-378 (387)
142 PRK09064 5-aminolevulinate syn 100.0 4.8E-27 1E-31 232.3 32.2 317 94-421 45-394 (407)
143 PLN02242 methionine gamma-lyas 100.0 2.8E-27 6.2E-32 232.4 29.9 244 126-383 73-347 (418)
144 TIGR01821 5aminolev_synth 5-am 100.0 6E-27 1.3E-31 231.1 32.3 316 95-421 45-393 (402)
145 cd00617 Tnase_like Tryptophana 100.0 7.3E-27 1.6E-31 228.7 31.5 318 93-421 9-405 (431)
146 TIGR03403 nifS_epsilon cystein 100.0 1.5E-27 3.2E-32 234.0 26.2 313 99-420 2-371 (382)
147 COG1448 TyrB Aspartate/tyrosin 100.0 2.1E-26 4.5E-31 212.0 30.0 331 79-421 9-395 (396)
148 COG3977 Alanine-alpha-ketoisov 100.0 4.1E-27 8.9E-32 208.3 24.1 316 96-421 31-405 (417)
149 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.4E-26 5.1E-31 224.9 31.8 282 131-421 61-373 (373)
150 cd00378 SHMT Serine-glycine hy 100.0 1E-26 2.3E-31 229.6 29.5 315 97-420 21-381 (402)
151 cd00610 OAT_like Acetyl ornith 100.0 2.4E-27 5.1E-32 235.1 25.0 323 92-420 33-408 (413)
152 TIGR02326 transamin_PhnW 2-ami 100.0 3.2E-26 7E-31 223.0 32.4 309 104-420 9-358 (363)
153 COG0520 csdA Selenocysteine ly 100.0 5.9E-26 1.3E-30 220.8 32.1 318 94-421 20-402 (405)
154 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.7E-26 3.8E-31 226.1 28.3 315 99-420 2-375 (376)
155 PRK13393 5-aminolevulinate syn 100.0 1.8E-25 3.9E-30 220.8 32.0 316 95-421 45-393 (406)
156 TIGR03402 FeS_nifS cysteine de 100.0 6E-26 1.3E-30 222.4 27.8 313 99-420 2-368 (379)
157 PRK01278 argD acetylornithine 100.0 6.4E-26 1.4E-30 222.9 27.9 314 92-421 28-382 (389)
158 cd00613 GDC-P Glycine cleavage 100.0 1.4E-25 3E-30 221.4 30.1 317 95-420 20-397 (398)
159 PRK06234 methionine gamma-lyas 99.9 1.5E-25 3.3E-30 219.8 29.7 270 124-409 59-383 (400)
160 PRK00451 glycine dehydrogenase 99.9 2E-25 4.4E-30 223.3 30.4 314 96-421 69-445 (447)
161 PRK06460 hypothetical protein; 99.9 1.5E-25 3.3E-30 218.1 27.5 216 126-355 42-264 (376)
162 PRK00011 glyA serine hydroxyme 99.9 2.4E-25 5.2E-30 220.8 29.3 317 95-421 25-386 (416)
163 PRK13520 L-tyrosine decarboxyl 99.9 6.6E-25 1.4E-29 214.5 31.5 305 108-421 31-368 (371)
164 PRK04073 rocD ornithine--oxo-a 99.9 2.9E-25 6.4E-30 218.5 28.1 312 92-420 37-393 (396)
165 TIGR02080 O_succ_thio_ly O-suc 99.9 4.7E-25 1E-29 214.7 27.8 236 98-355 26-271 (382)
166 TIGR02006 IscS cysteine desulf 99.9 1.1E-24 2.4E-29 214.9 28.0 312 98-420 5-373 (402)
167 TIGR01437 selA_rel uncharacter 99.9 1.9E-24 4.2E-29 209.6 28.8 296 109-421 25-362 (363)
168 PRK06767 methionine gamma-lyas 99.9 8E-25 1.7E-29 214.0 26.0 276 124-416 56-377 (386)
169 PRK08247 cystathionine gamma-s 99.9 1.2E-24 2.7E-29 211.3 26.2 229 124-370 47-288 (366)
170 PRK08045 cystathionine gamma-s 99.9 3.2E-24 6.8E-29 209.1 28.7 216 124-355 47-272 (386)
171 PRK04260 acetylornithine amino 99.9 3.4E-24 7.4E-29 209.6 29.0 319 92-421 26-371 (375)
172 cd06450 DOPA_deC_like DOPA dec 99.9 1.3E-24 2.9E-29 210.2 25.9 278 125-420 29-344 (345)
173 COG0156 BioF 7-keto-8-aminopel 99.9 1.1E-23 2.3E-28 201.3 30.1 317 94-421 38-387 (388)
174 PRK02936 argD acetylornithine 99.9 6.5E-24 1.4E-28 207.9 28.9 319 92-421 26-373 (377)
175 TIGR01325 O_suc_HS_sulf O-succ 99.9 4.2E-24 9.1E-29 208.5 26.9 279 124-419 49-377 (380)
176 PRK07504 O-succinylhomoserine 99.9 2.2E-24 4.8E-29 211.3 24.9 270 97-383 31-332 (398)
177 PRK08249 cystathionine gamma-s 99.9 5.1E-24 1.1E-28 208.5 27.2 215 125-355 60-283 (398)
178 PRK07582 cystathionine gamma-l 99.9 2.4E-23 5.2E-28 202.1 30.6 274 124-420 46-365 (366)
179 TIGR03235 DNA_S_dndA cysteine 99.9 2.8E-24 6.2E-29 208.6 23.8 299 100-409 2-342 (353)
180 PRK07505 hypothetical protein; 99.9 3.9E-23 8.5E-28 203.9 32.0 310 92-420 43-395 (402)
181 PRK05093 argD bifunctional N-s 99.9 8.7E-24 1.9E-28 208.5 27.2 313 92-421 37-394 (403)
182 cd00614 CGS_like CGS_like: Cys 99.9 1E-23 2.2E-28 205.4 27.2 279 125-420 36-366 (369)
183 TIGR01328 met_gam_lyase methio 99.9 1E-23 2.2E-28 206.2 26.9 216 124-355 54-280 (391)
184 PRK08133 O-succinylhomoserine 99.9 1.8E-23 3.9E-28 204.5 28.3 215 125-355 57-280 (390)
185 PRK14012 cysteine desulfurase; 99.9 1.2E-23 2.6E-28 207.8 27.2 310 98-420 5-375 (404)
186 PLN02651 cysteine desulfurase 99.9 9.2E-24 2E-28 205.7 25.4 304 99-413 2-362 (364)
187 PRK07503 methionine gamma-lyas 99.9 3.7E-23 7.9E-28 203.1 29.5 216 124-355 60-286 (403)
188 PRK08776 cystathionine gamma-s 99.9 2.6E-23 5.7E-28 203.7 28.2 216 124-355 55-280 (405)
189 PF12897 Aminotran_MocR: Alani 99.9 4.8E-23 1E-27 190.1 26.6 294 124-421 62-409 (425)
190 PRK00854 rocD ornithine--oxo-a 99.9 4.5E-23 9.7E-28 203.6 28.5 315 92-421 38-395 (401)
191 PRK08861 cystathionine gamma-s 99.9 4.7E-23 1E-27 200.3 27.9 216 124-355 48-273 (388)
192 TIGR00713 hemL glutamate-1-sem 99.9 4.7E-23 1E-27 204.7 28.5 318 91-420 44-415 (423)
193 PRK07810 O-succinylhomoserine 99.9 4.3E-23 9.3E-28 202.3 27.5 216 124-355 65-290 (403)
194 COG1104 NifS Cysteine sulfinat 99.9 3.3E-23 7.2E-28 194.6 25.1 313 98-419 3-369 (386)
195 PTZ00125 ornithine aminotransf 99.9 6.9E-23 1.5E-27 202.3 28.1 321 92-421 28-389 (400)
196 PLN03227 serine palmitoyltrans 99.9 3E-22 6.5E-27 196.2 31.5 307 106-419 10-374 (392)
197 PRK07050 cystathionine beta-ly 99.9 8.1E-23 1.8E-27 199.9 27.0 276 124-416 60-383 (394)
198 COG0075 Serine-pyruvate aminot 99.9 5.1E-22 1.1E-26 188.0 31.4 308 104-418 11-354 (383)
199 PRK07811 cystathionine gamma-s 99.9 1.4E-22 3E-27 198.2 28.5 278 124-418 56-382 (388)
200 PRK05968 hypothetical protein; 99.9 1.2E-22 2.5E-27 198.7 26.3 272 125-414 59-376 (389)
201 PF00266 Aminotran_5: Aminotra 99.9 1.6E-22 3.5E-27 197.6 26.6 308 99-415 2-369 (371)
202 KOG0258 Alanine aminotransfera 99.9 1.2E-22 2.6E-27 186.1 23.0 285 125-409 108-456 (475)
203 PRK08064 cystathionine beta-ly 99.9 3.3E-22 7.2E-27 195.6 27.6 277 127-421 52-383 (390)
204 PLN02955 8-amino-7-oxononanoat 99.9 1.1E-21 2.4E-26 191.7 30.8 311 93-420 100-457 (476)
205 PRK08574 cystathionine gamma-s 99.9 6.1E-22 1.3E-26 193.1 27.4 215 125-355 49-272 (385)
206 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 5.4E-22 1.2E-26 195.8 27.3 163 124-299 52-219 (418)
207 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.7E-21 5.9E-26 187.6 30.5 251 126-391 15-298 (352)
208 PRK08088 4-aminobutyrate amino 99.9 7.6E-22 1.6E-26 195.7 27.0 326 91-421 37-417 (425)
209 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.2E-21 2.7E-26 191.3 27.6 268 111-390 14-321 (379)
210 PRK09028 cystathionine beta-ly 99.9 2.2E-21 4.7E-26 188.5 28.9 234 106-355 34-280 (394)
211 PRK07269 cystathionine gamma-s 99.9 6.2E-22 1.3E-26 191.5 24.6 279 124-419 49-359 (364)
212 TIGR01329 cysta_beta_ly_E cyst 99.9 2.3E-21 4.9E-26 188.9 28.2 272 127-417 45-368 (378)
213 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.9E-21 4.2E-26 189.2 27.5 267 111-391 11-319 (376)
214 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.7E-21 8E-26 187.9 29.6 264 114-391 14-318 (375)
215 PRK08248 O-acetylhomoserine am 99.9 2.7E-21 5.8E-26 190.8 27.8 214 126-355 61-316 (431)
216 PRK12381 bifunctional succinyl 99.9 4E-21 8.7E-26 189.5 29.0 318 91-421 35-393 (406)
217 TIGR01324 cysta_beta_ly_B cyst 99.9 3.9E-21 8.5E-26 186.7 28.0 274 126-416 47-368 (377)
218 PRK06702 O-acetylhomoserine am 99.9 1.2E-20 2.5E-25 184.9 30.4 213 128-355 60-313 (432)
219 PLN00144 acetylornithine trans 99.9 7.9E-21 1.7E-25 185.5 29.2 315 91-421 11-374 (382)
220 TIGR03246 arg_catab_astC succi 99.9 3.2E-21 6.9E-26 189.7 26.0 316 92-421 32-389 (397)
221 PRK05939 hypothetical protein; 99.9 5.8E-21 1.3E-25 186.7 27.4 240 127-382 45-332 (397)
222 TIGR01885 Orn_aminotrans ornit 99.9 6.5E-21 1.4E-25 188.0 26.9 316 92-421 34-396 (401)
223 PRK07671 cystathionine beta-ly 99.9 7.9E-21 1.7E-25 185.0 26.9 215 124-355 45-269 (377)
224 PRK05937 8-amino-7-oxononanoat 99.9 5E-20 1.1E-24 179.7 31.9 307 95-421 4-347 (370)
225 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.4E-20 3.1E-25 186.3 27.3 327 91-421 29-414 (420)
226 PRK06084 O-acetylhomoserine am 99.9 1.1E-20 2.4E-25 186.2 25.4 215 125-355 54-311 (425)
227 PLN02624 ornithine-delta-amino 99.9 1.7E-20 3.6E-25 187.8 27.1 317 91-421 71-438 (474)
228 TIGR01814 kynureninase kynuren 99.9 2.8E-20 6E-25 183.8 28.3 312 95-421 26-404 (406)
229 PRK04366 glycine dehydrogenase 99.9 4.5E-20 9.8E-25 185.2 29.8 315 100-421 73-445 (481)
230 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.8E-19 3.8E-24 176.6 32.6 299 112-421 11-379 (380)
231 PLN02509 cystathionine beta-ly 99.9 4.3E-20 9.3E-25 182.6 25.4 211 128-355 132-352 (464)
232 PRK06176 cystathionine gamma-s 99.9 9E-20 1.9E-24 177.6 26.8 215 124-355 45-269 (380)
233 PRK09792 4-aminobutyrate trans 99.9 1.1E-19 2.4E-24 179.7 27.3 325 91-421 36-415 (421)
234 PRK05967 cystathionine beta-ly 99.9 1.1E-19 2.4E-24 176.2 26.7 212 128-355 63-283 (395)
235 PRK13034 serine hydroxymethylt 99.9 3.2E-19 6.9E-24 176.1 30.0 317 96-421 29-389 (416)
236 cd00615 Orn_deC_like Ornithine 99.9 3.6E-20 7.8E-25 174.9 21.9 223 124-350 54-293 (294)
237 PRK08117 4-aminobutyrate amino 99.9 4.9E-19 1.1E-23 176.1 29.0 327 91-421 39-423 (433)
238 PRK04612 argD acetylornithine 99.9 8.3E-19 1.8E-23 172.3 29.3 322 91-420 36-396 (408)
239 PRK08360 4-aminobutyrate amino 99.9 7.1E-19 1.5E-23 174.5 28.7 321 91-419 37-421 (443)
240 COG4992 ArgD Ornithine/acetylo 99.8 2.7E-19 5.8E-24 168.1 23.7 319 90-421 37-392 (404)
241 PRK06777 4-aminobutyrate amino 99.8 6E-19 1.3E-23 174.4 27.1 325 91-421 36-415 (421)
242 PRK05994 O-acetylhomoserine am 99.8 9.6E-19 2.1E-23 172.9 28.4 213 127-355 61-315 (427)
243 PRK00062 glutamate-1-semialdeh 99.8 1E-18 2.2E-23 173.2 28.1 319 92-419 47-419 (426)
244 PRK08114 cystathionine beta-ly 99.8 1.1E-18 2.4E-23 169.0 27.3 213 127-355 60-283 (395)
245 KOG2862 Alanine-glyoxylate ami 99.8 5.2E-18 1.1E-22 151.6 28.7 310 104-418 23-373 (385)
246 PRK07812 O-acetylhomoserine am 99.8 1.5E-18 3.2E-23 171.1 27.9 241 128-383 68-368 (436)
247 PRK08134 O-acetylhomoserine am 99.8 1.1E-18 2.3E-23 172.3 26.8 214 126-355 61-316 (433)
248 PRK15407 lipopolysaccharide bi 99.8 1.2E-18 2.7E-23 172.4 27.0 248 129-391 63-376 (438)
249 COG2008 GLY1 Threonine aldolas 99.8 1.8E-18 3.9E-23 159.4 25.8 308 103-421 6-340 (342)
250 COG0399 WecE Predicted pyridox 99.8 2.5E-18 5.5E-23 163.3 27.0 264 111-389 15-312 (374)
251 PRK06918 4-aminobutyrate amino 99.8 2E-18 4.3E-23 172.3 26.5 322 91-421 50-437 (451)
252 PRK03080 phosphoserine aminotr 99.8 3.5E-18 7.5E-23 167.0 27.2 300 104-420 18-369 (378)
253 cd00611 PSAT_like Phosphoserin 99.8 1.3E-18 2.9E-23 168.5 23.5 302 103-421 4-353 (355)
254 PRK07495 4-aminobutyrate amino 99.8 6E-18 1.3E-22 167.1 28.4 322 91-419 36-413 (425)
255 PTZ00094 serine hydroxymethylt 99.8 7E-18 1.5E-22 168.5 28.7 320 95-421 34-405 (452)
256 KOG1549 Cysteine desulfurase N 99.8 1.5E-18 3.2E-23 163.9 22.2 199 93-299 40-257 (428)
257 PRK05355 3-phosphoserine/phosp 99.8 2.8E-18 6E-23 166.1 24.9 303 103-421 8-355 (360)
258 PLN02724 Molybdenum cofactor s 99.8 7.1E-18 1.5E-22 179.0 28.7 319 97-420 35-484 (805)
259 PRK05964 adenosylmethionine--8 99.8 1.5E-17 3.2E-22 165.0 27.8 321 91-420 38-418 (423)
260 KOG1368 Threonine aldolase [Am 99.8 9E-18 2E-22 149.2 23.1 310 96-418 22-362 (384)
261 KOG1412 Aspartate aminotransfe 99.8 1.5E-17 3.3E-22 148.5 24.6 286 122-420 66-401 (410)
262 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 4.5E-18 9.9E-23 164.5 23.0 277 126-419 52-382 (386)
263 KOG1411 Aspartate aminotransfe 99.8 3.1E-18 6.7E-23 155.0 19.2 330 79-420 35-421 (427)
264 PRK13580 serine hydroxymethylt 99.8 6.1E-17 1.3E-21 158.8 29.4 318 95-420 49-441 (493)
265 PRK06058 4-aminobutyrate amino 99.8 6.3E-17 1.4E-21 161.1 30.1 324 91-420 52-435 (443)
266 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.3E-17 2.7E-22 162.3 24.1 250 129-393 25-310 (363)
267 COG0626 MetC Cystathionine bet 99.8 4.9E-17 1.1E-21 155.4 26.9 243 126-383 60-331 (396)
268 TIGR01364 serC_1 phosphoserine 99.8 2.2E-17 4.8E-22 159.0 24.8 272 131-421 39-345 (349)
269 TIGR03372 putres_am_tran putre 99.8 8.4E-17 1.8E-21 159.0 29.1 324 91-420 71-440 (442)
270 PRK05613 O-acetylhomoserine am 99.8 4.6E-17 9.9E-22 160.6 26.3 214 127-355 67-325 (437)
271 TIGR01366 serC_3 phosphoserine 99.8 1.3E-16 2.9E-21 154.6 28.9 299 105-420 10-356 (361)
272 KOG1360 5-aminolevulinate synt 99.8 7.1E-17 1.5E-21 148.7 25.0 348 61-419 127-519 (570)
273 cd01494 AAT_I Aspartate aminot 99.8 3.9E-18 8.6E-23 147.1 15.9 165 131-298 2-170 (170)
274 TIGR02407 ectoine_ectB diamino 99.8 1.2E-16 2.7E-21 157.5 27.0 321 91-420 31-405 (412)
275 PRK06541 hypothetical protein; 99.8 2.1E-16 4.6E-21 157.5 28.4 323 91-419 48-450 (460)
276 TIGR01365 serC_2 phosphoserine 99.8 1.9E-16 4.2E-21 152.6 27.1 292 113-419 19-368 (374)
277 PRK11522 putrescine--2-oxoglut 99.8 3.1E-16 6.7E-21 156.0 28.9 323 91-419 78-446 (459)
278 PRK06434 cystathionine gamma-l 99.8 1.7E-16 3.6E-21 154.0 26.1 237 127-382 62-320 (384)
279 PRK03715 argD acetylornithine 99.8 2.1E-16 4.6E-21 154.9 26.7 316 92-419 33-388 (395)
280 PLN02414 glycine dehydrogenase 99.8 1.8E-16 3.8E-21 167.7 27.5 321 95-421 525-904 (993)
281 KOG1359 Glycine C-acetyltransf 99.8 1.2E-16 2.5E-21 141.9 21.4 309 95-420 67-408 (417)
282 PRK08593 4-aminobutyrate amino 99.8 9.4E-16 2E-20 152.5 29.8 321 91-419 38-424 (445)
283 PRK09264 diaminobutyrate--2-ox 99.8 7.3E-16 1.6E-20 152.8 28.3 323 91-420 35-409 (425)
284 PRK02769 histidine decarboxyla 99.8 6.4E-16 1.4E-20 150.0 26.4 271 132-418 68-363 (380)
285 TIGR02618 tyr_phenol_ly tyrosi 99.8 3.3E-15 7.2E-20 144.6 30.8 314 97-421 40-423 (450)
286 TIGR01788 Glu-decarb-GAD gluta 99.7 1.2E-15 2.6E-20 150.1 28.3 310 108-419 52-424 (431)
287 PLN03226 serine hydroxymethylt 99.7 2E-15 4.3E-20 150.6 30.2 319 95-420 34-415 (475)
288 PLN02760 4-aminobutyrate:pyruv 99.7 2.4E-15 5.3E-20 151.0 29.1 322 91-419 85-486 (504)
289 PLN03032 serine decarboxylase; 99.7 1.5E-15 3.3E-20 146.4 26.1 275 131-420 68-372 (374)
290 TIGR03531 selenium_SpcS O-phos 99.7 2.3E-15 5.1E-20 147.5 27.7 256 131-387 107-386 (444)
291 PRK07678 aminotransferase; Val 99.7 4.3E-15 9.3E-20 148.0 30.1 324 91-419 43-444 (451)
292 COG0160 GabT 4-aminobutyrate a 99.7 2.5E-15 5.3E-20 145.6 26.9 325 91-421 52-439 (447)
293 TIGR00709 dat 2,4-diaminobutyr 99.7 5.5E-15 1.2E-19 147.1 30.2 322 91-419 35-430 (442)
294 PRK05769 4-aminobutyrate amino 99.7 2.8E-15 6E-20 148.9 27.8 320 91-419 50-434 (441)
295 PLN02271 serine hydroxymethylt 99.7 5.7E-15 1.2E-19 145.5 29.1 318 95-420 148-536 (586)
296 PRK06105 aminotransferase; Pro 99.7 4.5E-15 9.8E-20 148.1 28.3 319 91-418 44-443 (460)
297 PRK06062 hypothetical protein; 99.7 7.5E-15 1.6E-19 146.2 29.6 320 91-419 49-440 (451)
298 PRK07986 adenosylmethionine--8 99.7 2.4E-15 5.3E-20 148.4 25.3 319 91-418 39-417 (428)
299 PRK09221 beta alanine--pyruvat 99.7 4.6E-15 9.9E-20 147.4 27.0 320 91-419 45-438 (445)
300 PRK13360 omega amino acid--pyr 99.7 7.1E-15 1.5E-19 146.0 28.0 320 91-419 42-435 (442)
301 PRK04013 argD acetylornithine/ 99.7 2.3E-15 4.9E-20 145.4 23.3 300 92-420 21-353 (364)
302 PF04864 Alliinase_C: Allinase 99.7 2.9E-16 6.3E-21 143.7 16.0 271 131-419 45-360 (363)
303 KOG0053 Cystathionine beta-lya 99.7 6.9E-15 1.5E-19 139.0 25.5 215 125-355 73-297 (409)
304 PRK06149 hypothetical protein; 99.7 6.5E-15 1.4E-19 159.3 28.6 324 91-420 581-966 (972)
305 PRK12389 glutamate-1-semialdeh 99.7 3.9E-14 8.5E-19 140.5 32.0 318 91-419 49-422 (428)
306 PRK07482 hypothetical protein; 99.7 1.4E-14 3E-19 144.7 28.5 318 91-418 46-448 (461)
307 PRK05630 adenosylmethionine--8 99.7 1.9E-14 4.1E-19 142.1 29.0 319 91-419 36-415 (422)
308 PRK05965 hypothetical protein; 99.7 1.3E-14 2.8E-19 144.8 27.9 320 91-418 42-441 (459)
309 PRK07046 aminotransferase; Val 99.7 4.7E-14 1E-18 140.3 31.5 312 91-419 71-445 (453)
310 PF00464 SHMT: Serine hydroxym 99.7 4.6E-15 1E-19 142.5 23.0 302 96-406 21-380 (399)
311 PRK04311 selenocysteine syntha 99.7 5.6E-14 1.2E-18 139.3 31.3 300 109-421 98-461 (464)
312 PRK06082 4-aminobutyrate amino 99.7 3.8E-14 8.2E-19 141.3 30.3 321 91-419 68-446 (459)
313 PRK06173 adenosylmethionine--8 99.7 2E-14 4.2E-19 142.2 28.0 320 91-419 40-420 (429)
314 COG0112 GlyA Glycine/serine hy 99.7 1.2E-14 2.6E-19 135.1 24.6 315 96-419 27-385 (413)
315 PRK12403 putative aminotransfe 99.7 4.6E-14 1E-18 140.9 30.4 320 91-419 50-447 (460)
316 PLN02452 phosphoserine transam 99.7 1.4E-14 3.1E-19 139.6 25.8 306 96-421 7-360 (365)
317 PRK07480 putative aminotransfe 99.7 1.7E-14 3.6E-19 143.7 27.0 319 91-418 46-442 (456)
318 PRK07483 hypothetical protein; 99.7 5.7E-14 1.2E-18 139.6 30.5 321 91-418 26-431 (443)
319 PRK06148 hypothetical protein; 99.7 2.8E-14 6.1E-19 154.5 29.2 323 91-419 620-1005(1013)
320 PRK05639 4-aminobutyrate amino 99.7 1.1E-13 2.5E-18 137.7 31.3 324 91-420 49-436 (457)
321 PRK06943 adenosylmethionine--8 99.7 5.3E-14 1.1E-18 140.1 28.4 320 91-419 50-441 (453)
322 PRK07036 hypothetical protein; 99.7 6.5E-14 1.4E-18 139.9 28.9 319 91-418 47-446 (466)
323 TIGR00508 bioA adenosylmethion 99.7 7E-14 1.5E-18 138.5 28.5 317 92-420 42-422 (427)
324 PRK00615 glutamate-1-semialdeh 99.7 7.2E-14 1.6E-18 138.1 27.4 321 91-420 49-424 (433)
325 PRK07030 adenosylmethionine--8 99.7 6.4E-14 1.4E-18 139.9 27.1 319 91-418 43-440 (466)
326 PRK07481 hypothetical protein; 99.7 1E-13 2.3E-18 138.0 28.5 319 92-419 39-440 (449)
327 KOG1357 Serine palmitoyltransf 99.7 5.4E-15 1.2E-19 138.7 17.5 304 107-420 154-495 (519)
328 PRK13237 tyrosine phenol-lyase 99.7 5.3E-13 1.2E-17 129.7 31.8 291 124-421 72-430 (460)
329 PRK06917 hypothetical protein; 99.7 3.6E-13 7.7E-18 134.0 31.6 325 91-419 27-432 (447)
330 PRK08742 adenosylmethionine--8 99.7 1.2E-13 2.7E-18 137.8 28.2 317 91-419 60-462 (472)
331 COG1103 Archaea-specific pyrid 99.6 3.6E-13 7.8E-18 118.6 26.8 301 109-421 29-377 (382)
332 PF01212 Beta_elim_lyase: Beta 99.6 5.4E-16 1.2E-20 144.7 9.8 250 109-365 7-283 (290)
333 PLN02482 glutamate-1-semialdeh 99.6 1.8E-13 3.9E-18 136.4 27.8 315 91-420 95-469 (474)
334 COG2873 MET17 O-acetylhomoseri 99.6 9.2E-14 2E-18 127.9 23.4 220 123-355 53-314 (426)
335 PRK06916 adenosylmethionine--8 99.6 1.6E-13 3.6E-18 136.9 26.5 320 91-419 52-450 (460)
336 TIGR00474 selA seryl-tRNA(sec) 99.6 9.6E-13 2.1E-17 130.1 30.2 297 109-418 93-453 (454)
337 COG0001 HemL Glutamate-1-semia 99.6 2.2E-13 4.7E-18 129.8 24.0 322 90-419 48-423 (432)
338 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 7.8E-14 1.7E-18 134.7 20.8 262 127-392 64-400 (417)
339 PRK06938 diaminobutyrate--2-ox 99.6 6.9E-13 1.5E-17 132.4 27.3 322 91-419 59-455 (464)
340 TIGR00699 GABAtrns_euk 4-amino 99.6 3.4E-13 7.4E-18 133.7 24.1 315 91-420 54-462 (464)
341 COG0076 GadB Glutamate decarbo 99.6 8.3E-13 1.8E-17 130.5 25.5 283 109-392 74-403 (460)
342 PRK06931 diaminobutyrate--2-ox 99.6 1.7E-12 3.6E-17 129.6 27.4 319 91-419 54-449 (459)
343 PLN02263 serine decarboxylase 99.6 1.8E-12 4E-17 127.1 26.9 271 133-419 137-438 (470)
344 PRK15029 arginine decarboxylas 99.6 3.6E-12 7.7E-17 131.9 30.0 167 127-297 203-399 (755)
345 PRK12462 phosphoserine aminotr 99.6 2E-12 4.4E-17 123.5 26.0 303 98-421 6-359 (364)
346 TIGR00461 gcvP glycine dehydro 99.6 2.3E-12 5E-17 135.2 28.2 282 132-421 533-864 (939)
347 PRK05367 glycine dehydrogenase 99.6 7E-12 1.5E-16 133.7 31.2 319 95-421 499-872 (954)
348 KOG1404 Alanine-glyoxylate ami 99.5 1.4E-12 3.1E-17 120.7 21.1 322 91-416 46-430 (442)
349 PRK13578 ornithine decarboxyla 99.5 1.2E-11 2.5E-16 126.8 29.7 168 127-298 172-369 (720)
350 PLN02880 tyrosine decarboxylas 99.5 5.3E-12 1.1E-16 126.7 26.3 288 132-420 125-480 (490)
351 PRK15399 lysine decarboxylase 99.5 2.8E-11 6.1E-16 124.0 31.5 285 127-421 193-556 (713)
352 COG0161 BioA Adenosylmethionin 99.5 8E-12 1.7E-16 120.6 25.8 316 93-419 42-438 (449)
353 PRK12566 glycine dehydrogenase 99.5 1E-11 2.2E-16 129.6 28.0 321 96-421 501-873 (954)
354 PRK08297 L-lysine aminotransfe 99.5 9.8E-12 2.1E-16 123.6 26.8 315 93-419 43-436 (443)
355 PRK15400 lysine decarboxylase 99.5 3.7E-11 8E-16 123.1 30.1 285 127-421 193-556 (714)
356 TIGR03251 LAT_fam L-lysine 6-t 99.5 7.9E-12 1.7E-16 124.1 24.2 316 93-419 36-429 (431)
357 PLN02590 probable tyrosine dec 99.5 1.8E-11 3.9E-16 123.1 26.0 287 133-420 174-525 (539)
358 PRK05367 glycine dehydrogenase 99.5 2.7E-11 5.8E-16 129.3 28.3 296 100-419 81-437 (954)
359 PRK06209 glutamate-1-semialdeh 99.5 1.6E-11 3.5E-16 121.9 23.2 309 91-419 44-400 (431)
360 PLN02974 adenosylmethionine-8- 99.4 6.1E-11 1.3E-15 124.5 27.6 315 96-419 366-813 (817)
361 PLN02414 glycine dehydrogenase 99.4 9.7E-11 2.1E-15 124.6 27.4 297 102-420 110-465 (993)
362 TIGR03799 NOD_PanD_pyr putativ 99.4 8.8E-11 1.9E-15 118.3 25.8 270 149-419 162-517 (522)
363 COG1982 LdcC Arginine/lysine/o 99.4 3.4E-10 7.3E-15 111.7 28.3 286 127-419 68-403 (557)
364 PF06838 Met_gamma_lyase: Meth 99.4 2.3E-11 5.1E-16 112.5 18.9 191 111-309 27-249 (403)
365 KOG1402 Ornithine aminotransfe 99.4 4.9E-11 1.1E-15 108.1 17.7 317 90-421 54-421 (427)
366 TIGR02617 tnaA_trp_ase tryptop 99.4 1.3E-09 2.9E-14 105.0 27.9 316 97-421 43-438 (467)
367 KOG1401 Acetylornithine aminot 99.3 4.6E-10 9.9E-15 105.0 22.3 276 90-369 51-370 (433)
368 PF00202 Aminotran_3: Aminotra 99.2 4.4E-10 9.5E-15 108.1 15.7 275 92-370 13-338 (339)
369 KOG1358 Serine palmitoyltransf 99.2 1.5E-09 3.4E-14 100.7 17.3 316 94-420 93-458 (467)
370 KOG2467 Glycine/serine hydroxy 99.2 5.8E-09 1.2E-13 96.1 20.5 313 98-419 43-421 (477)
371 COG3844 Kynureninase [Amino ac 99.2 1E-08 2.2E-13 93.3 21.4 257 132-406 79-380 (407)
372 TIGR00461 gcvP glycine dehydro 99.2 2.8E-08 6.2E-13 104.9 28.0 294 101-418 70-425 (939)
373 PF00282 Pyridoxal_deC: Pyrido 99.1 2.8E-09 6E-14 103.6 18.1 236 133-369 83-372 (373)
374 COG4100 Cystathionine beta-lya 99.0 4.4E-08 9.6E-13 88.1 17.8 178 124-308 60-259 (416)
375 PLN02994 1-aminocyclopropane-1 99.0 2.3E-09 5E-14 90.1 8.0 86 93-181 41-152 (153)
376 COG1921 SelA Selenocysteine sy 98.9 3.2E-07 6.9E-12 87.1 20.5 212 110-327 40-267 (395)
377 KOG1383 Glutamate decarboxylas 98.8 6.6E-07 1.4E-11 85.5 20.6 260 132-394 123-415 (491)
378 PF02347 GDC-P: Glycine cleava 98.8 2.4E-07 5.2E-12 89.9 17.6 266 133-419 114-427 (429)
379 COG1003 GcvP Glycine cleavage 98.8 1.1E-06 2.5E-11 83.2 21.4 318 95-421 66-444 (496)
380 KOG1403 Predicted alanine-glyo 98.8 1.5E-07 3.3E-12 84.7 14.6 307 93-404 45-414 (452)
381 TIGR03811 tyr_de_CO2_Ent tyros 98.8 3.5E-06 7.5E-11 86.2 25.8 89 172-260 224-326 (608)
382 COG0403 GcvP Glycine cleavage 98.7 2.6E-05 5.7E-10 74.1 27.9 302 99-419 79-445 (450)
383 COG1932 SerC Phosphoserine ami 98.7 9.3E-06 2E-10 75.8 21.8 306 97-420 6-359 (365)
384 COG3033 TnaA Tryptophanase [Am 98.6 7.1E-05 1.5E-09 69.6 24.4 289 125-421 74-441 (471)
385 PF03841 SelA: L-seryl-tRNA se 98.4 3E-07 6.6E-12 86.6 5.3 213 131-352 49-296 (367)
386 KOG0629 Glutamate decarboxylas 98.4 0.00011 2.5E-09 69.6 21.6 288 133-421 145-506 (510)
387 PRK12566 glycine dehydrogenase 98.3 0.00065 1.4E-08 72.2 27.2 295 99-418 83-438 (954)
388 KOG1405 4-aminobutyrate aminot 98.0 0.00012 2.5E-09 68.0 13.6 185 207-406 255-462 (484)
389 PF05889 SLA_LP_auto_ag: Solub 97.8 0.006 1.3E-07 58.5 20.6 276 142-420 69-386 (389)
390 KOG3846 L-kynurenine hydrolase 97.7 0.0025 5.5E-08 58.2 16.0 165 131-300 113-293 (465)
391 KOG2040 Glycine dehydrogenase 97.6 0.0083 1.8E-07 60.2 19.0 280 133-418 586-909 (1001)
392 KOG0628 Aromatic-L-amino-acid/ 97.5 0.062 1.4E-06 52.1 23.1 85 173-258 185-276 (511)
393 KOG2040 Glycine dehydrogenase 96.9 0.44 9.5E-06 48.4 22.4 263 134-418 168-477 (1001)
394 KOG2790 Phosphoserine aminotra 96.4 0.52 1.1E-05 43.1 17.4 309 94-421 5-365 (370)
395 KOG3843 Predicted serine hydro 91.9 1.7 3.7E-05 39.4 9.8 149 158-310 88-252 (432)
396 PLN02672 methionine S-methyltr 86.7 7.4 0.00016 43.2 11.7 168 127-307 424-625 (1082)
397 COG2102 Predicted ATPases of P 80.2 34 0.00073 30.5 11.0 154 149-317 4-177 (223)
398 PF08247 ENOD40: ENOD40 protei 73.1 1.4 3.1E-05 19.5 0.3 10 12-21 3-12 (12)
399 TIGR03590 PseG pseudaminic aci 73.0 35 0.00075 31.8 10.0 82 168-255 29-112 (279)
400 PRK08265 short chain dehydroge 64.3 73 0.0016 28.9 10.2 97 147-246 7-109 (261)
401 COG0373 HemA Glutamyl-tRNA red 59.2 98 0.0021 30.6 10.2 100 140-255 171-274 (414)
402 KOG1201 Hydroxysteroid 17-beta 53.2 33 0.0007 32.1 5.6 140 144-289 36-182 (300)
403 PF05368 NmrA: NmrA-like famil 52.3 83 0.0018 28.0 8.3 67 155-229 8-75 (233)
404 TIGR00715 precor6x_red precorr 52.0 1.9E+02 0.0042 26.5 12.2 60 185-245 191-252 (256)
405 PF01282 Ribosomal_S24e: Ribos 51.0 19 0.00041 26.8 3.1 26 127-152 11-36 (84)
406 COG0514 RecQ Superfamily II DN 49.6 62 0.0013 33.6 7.4 102 148-260 37-145 (590)
407 PRK06500 short chain dehydroge 44.3 2.3E+02 0.0049 25.1 10.0 97 147-246 7-110 (249)
408 COG0505 CarA Carbamoylphosphat 43.9 1.1E+02 0.0024 29.4 7.6 70 169-246 178-249 (368)
409 PRK06935 2-deoxy-D-gluconate 3 43.7 1.9E+02 0.0042 26.0 9.4 108 136-246 5-121 (258)
410 COG0816 Predicted endonuclease 42.9 54 0.0012 27.1 4.8 53 205-257 40-99 (141)
411 cd06448 L-Ser-dehyd Serine deh 42.9 2.2E+02 0.0047 27.0 9.8 96 147-245 52-149 (316)
412 TIGR03089 conserved hypothetic 42.3 1E+02 0.0022 27.6 7.1 65 148-218 154-225 (227)
413 KOG1546 Metacaspase involved i 41.6 1.3E+02 0.0028 28.5 7.5 105 132-260 88-209 (362)
414 PRK08589 short chain dehydroge 40.2 2.6E+02 0.0056 25.5 9.7 96 147-246 7-113 (272)
415 PRK09189 uroporphyrinogen-III 39.0 2.4E+02 0.0052 25.3 9.1 85 142-228 92-180 (240)
416 PLN02556 cysteine synthase/L-3 38.2 1.6E+02 0.0034 28.8 8.1 83 148-232 113-197 (368)
417 PRK05872 short chain dehydroge 38.1 3.3E+02 0.0072 25.2 10.9 98 146-246 9-115 (296)
418 PRK06139 short chain dehydroge 37.5 2.8E+02 0.0061 26.4 9.7 96 147-245 8-113 (330)
419 COG1087 GalE UDP-glucose 4-epi 37.4 1.2E+02 0.0026 28.6 6.6 71 148-223 2-72 (329)
420 TIGR00290 MJ0570_dom MJ0570-re 37.4 3.1E+02 0.0067 24.6 10.1 93 149-249 4-113 (223)
421 COG0031 CysK Cysteine synthase 37.1 2.4E+02 0.0051 26.7 8.6 98 144-243 59-165 (300)
422 COG2004 RPS24A Ribosomal prote 37.1 45 0.00097 26.0 3.2 27 127-153 30-56 (107)
423 PLN02591 tryptophan synthase 37.0 3.3E+02 0.0072 24.9 13.8 73 158-234 94-170 (250)
424 PF05127 Helicase_RecD: Helica 36.6 17 0.00038 31.3 1.1 116 153-283 8-125 (177)
425 PF02571 CbiJ: Precorrin-6x re 36.3 3.4E+02 0.0073 24.8 12.2 111 133-245 117-248 (249)
426 TIGR01470 cysG_Nterm siroheme 35.5 3.1E+02 0.0067 24.1 9.6 95 143-255 6-103 (205)
427 KOG1177 Long chain fatty acid 35.1 2.3E+02 0.0049 28.8 8.4 84 136-223 225-329 (596)
428 PRK07097 gluconate 5-dehydroge 35.1 3.4E+02 0.0074 24.5 10.7 100 144-246 8-117 (265)
429 TIGR00683 nanA N-acetylneurami 34.8 2.7E+02 0.0057 26.1 8.8 36 218-254 128-164 (290)
430 CHL00200 trpA tryptophan synth 34.3 3.8E+02 0.0082 24.7 14.5 54 185-246 113-166 (263)
431 PRK06079 enoyl-(acyl carrier p 34.1 3.5E+02 0.0075 24.3 9.5 97 147-246 8-117 (252)
432 PRK07424 bifunctional sterol d 33.6 4.4E+02 0.0096 26.1 10.5 97 144-246 176-272 (406)
433 PRK07063 short chain dehydroge 33.1 3.6E+02 0.0078 24.1 10.3 98 146-246 7-116 (260)
434 PRK12936 3-ketoacyl-(acyl-carr 32.7 3.4E+02 0.0075 23.8 9.9 97 147-246 7-110 (245)
435 cd00952 CHBPH_aldolase Trans-o 32.7 3.1E+02 0.0067 25.9 9.0 87 149-255 80-172 (309)
436 PF13552 DUF4127: Protein of u 32.6 4.9E+02 0.011 26.6 10.8 32 133-166 216-247 (497)
437 PLN03013 cysteine synthase 32.4 2.5E+02 0.0055 28.0 8.5 81 148-230 177-259 (429)
438 PRK05928 hemD uroporphyrinogen 32.4 2.5E+02 0.0054 25.0 8.1 93 133-228 90-187 (249)
439 PRK05848 nicotinate-nucleotide 32.1 2.5E+02 0.0055 26.1 8.0 95 144-251 157-254 (273)
440 PLN02565 cysteine synthase 31.7 2.5E+02 0.0054 26.7 8.2 52 148-199 69-121 (322)
441 PRK01178 rps24e 30S ribosomal 31.5 61 0.0013 25.0 3.2 26 127-152 29-54 (99)
442 PRK06194 hypothetical protein; 31.3 4.1E+02 0.0088 24.2 11.4 97 147-246 7-113 (287)
443 PRK10892 D-arabinose 5-phospha 31.1 3.3E+02 0.0071 25.8 9.1 99 133-233 35-137 (326)
444 PRK07067 sorbitol dehydrogenas 31.1 3.9E+02 0.0084 23.9 9.8 97 147-246 7-110 (257)
445 TIGR03325 BphB_TodD cis-2,3-di 30.8 3.1E+02 0.0068 24.6 8.6 77 146-225 5-86 (262)
446 PF00106 adh_short: short chai 30.7 3E+02 0.0065 22.5 8.0 129 149-289 3-144 (167)
447 cd06578 HemD Uroporphyrinogen- 30.6 2.9E+02 0.0062 24.3 8.2 60 169-228 121-183 (239)
448 PRK08862 short chain dehydroge 30.6 2.6E+02 0.0055 24.8 7.8 76 147-225 6-90 (227)
449 PF05687 DUF822: Plant protein 30.3 1.8E+02 0.0039 24.0 5.8 25 369-393 41-66 (150)
450 KOG3424 40S ribosomal protein 30.1 71 0.0015 25.3 3.3 26 127-152 33-58 (132)
451 PRK12481 2-deoxy-D-gluconate 3 29.7 4.1E+02 0.0089 23.8 10.3 98 146-246 8-113 (251)
452 TIGR01137 cysta_beta cystathio 29.5 3.1E+02 0.0067 27.4 8.9 52 147-199 63-116 (454)
453 cd01018 ZntC Metal binding pro 29.5 4.5E+02 0.0096 24.1 9.8 72 169-251 169-244 (266)
454 PRK07231 fabG 3-ketoacyl-(acyl 29.4 4E+02 0.0086 23.5 10.1 98 146-246 5-112 (251)
455 PRK08263 short chain dehydroge 29.3 4.4E+02 0.0095 23.9 10.3 96 148-246 5-107 (275)
456 PRK13011 formyltetrahydrofolat 29.0 3.1E+02 0.0066 25.7 8.1 90 149-243 93-186 (286)
457 PRK04147 N-acetylneuraminate l 28.9 4.8E+02 0.01 24.3 13.5 36 219-255 131-167 (293)
458 PRK09375 quinolinate synthetas 28.6 1.6E+02 0.0036 28.0 6.2 77 148-230 139-217 (319)
459 TIGR00262 trpA tryptophan synt 28.5 4.6E+02 0.01 24.0 14.7 55 184-246 108-162 (256)
460 COG2518 Pcm Protein-L-isoaspar 28.4 4.2E+02 0.0092 23.5 8.4 21 374-394 151-171 (209)
461 PF01408 GFO_IDH_MocA: Oxidore 28.4 2.8E+02 0.006 21.4 9.9 69 172-257 28-96 (120)
462 TIGR00715 precor6x_red precorr 28.3 1.8E+02 0.0039 26.8 6.3 71 148-225 2-72 (256)
463 COG0300 DltE Short-chain dehyd 28.2 4.9E+02 0.011 24.1 10.0 99 149-248 8-116 (265)
464 PRK06841 short chain dehydroge 28.1 4.3E+02 0.0093 23.5 9.8 100 144-246 13-119 (255)
465 cd05014 SIS_Kpsf KpsF-like pro 28.0 2.9E+02 0.0063 21.6 7.0 15 150-164 5-19 (128)
466 PRK07024 short chain dehydroge 28.0 4.4E+02 0.0095 23.6 10.9 96 148-246 4-109 (257)
467 PRK06114 short chain dehydroge 28.0 4.4E+02 0.0095 23.5 9.3 101 143-246 5-116 (254)
468 COG1587 HemD Uroporphyrinogen- 27.9 4.6E+02 0.0099 23.7 9.3 93 133-227 88-184 (248)
469 PRK06484 short chain dehydroge 27.8 5.5E+02 0.012 26.0 10.6 96 148-246 271-374 (520)
470 cd01137 PsaA Metal binding pro 27.7 4.7E+02 0.01 24.3 9.3 71 170-250 177-252 (287)
471 PRK06482 short chain dehydroge 27.5 4.7E+02 0.01 23.7 10.3 95 148-245 4-105 (276)
472 PLN02331 phosphoribosylglycina 27.3 4.4E+02 0.0095 23.3 8.9 90 150-243 4-99 (207)
473 PRK11337 DNA-binding transcrip 27.2 4.3E+02 0.0093 24.5 9.0 24 232-255 198-224 (292)
474 PRK10494 hypothetical protein; 27.1 2.1E+02 0.0045 26.4 6.6 69 131-199 138-209 (259)
475 PF03652 UPF0081: Uncharacteri 27.1 1.7E+02 0.0037 23.9 5.4 57 202-258 35-99 (135)
476 COG1648 CysG Siroheme synthase 27.1 2.9E+02 0.0063 24.5 7.2 48 143-191 9-57 (210)
477 PRK00109 Holliday junction res 26.9 1.8E+02 0.0039 23.9 5.5 54 204-257 40-100 (138)
478 TIGR00289 conserved hypothetic 26.8 4.7E+02 0.01 23.5 9.3 93 149-249 4-113 (222)
479 PF02702 KdpD: Osmosensitive K 26.7 1.7E+02 0.0037 25.9 5.5 97 152-252 15-121 (211)
480 PLN00011 cysteine synthase 26.6 3.5E+02 0.0076 25.7 8.3 53 147-199 70-123 (323)
481 COG0552 FtsY Signal recognitio 26.6 3.5E+02 0.0076 25.9 7.9 99 153-256 150-269 (340)
482 PRK07523 gluconate 5-dehydroge 26.5 4.6E+02 0.01 23.3 10.2 99 144-245 8-116 (255)
483 PRK06027 purU formyltetrahydro 26.5 3.4E+02 0.0073 25.4 7.9 91 149-244 93-187 (286)
484 COG2240 PdxK Pyridoxal/pyridox 26.4 4.6E+02 0.0099 24.5 8.5 34 218-258 73-115 (281)
485 PLN02417 dihydrodipicolinate s 26.1 3.9E+02 0.0085 24.8 8.4 85 149-255 73-162 (280)
486 PRK07478 short chain dehydroge 26.0 4.7E+02 0.01 23.2 9.1 97 147-246 7-114 (254)
487 PF00290 Trp_syntA: Tryptophan 26.0 5.2E+02 0.011 23.8 8.8 16 219-234 164-179 (259)
488 PRK05867 short chain dehydroge 25.9 4.7E+02 0.01 23.2 9.7 99 145-246 8-116 (253)
489 TIGR02313 HpaI-NOT-DapA 2,4-di 25.8 4.2E+02 0.0092 24.7 8.6 88 148-255 71-165 (294)
490 cd00951 KDGDH 5-dehydro-4-deox 25.8 1.9E+02 0.0041 27.0 6.2 47 198-245 11-60 (289)
491 PRK06106 nicotinate-nucleotide 25.6 3.3E+02 0.0072 25.4 7.6 93 144-249 169-261 (281)
492 PLN02654 acetate-CoA ligase 25.6 6.4E+02 0.014 26.6 10.9 66 167-236 142-210 (666)
493 PF00701 DHDPS: Dihydrodipicol 25.6 2.7E+02 0.0058 25.9 7.2 38 217-255 126-164 (289)
494 PRK08197 threonine synthase; V 25.6 6.5E+02 0.014 24.7 11.4 102 97-198 72-180 (394)
495 cd05013 SIS_RpiR RpiR-like pro 25.5 3.3E+02 0.0072 21.3 8.1 16 149-164 17-32 (139)
496 PF02310 B12-binding: B12 bind 25.4 3E+02 0.0065 21.3 6.6 65 184-257 21-91 (121)
497 cd00758 MoCF_BD MoCF_BD: molyb 25.0 3.7E+02 0.0079 21.6 7.1 61 181-244 22-84 (133)
498 cd01561 CBS_like CBS_like: Thi 24.8 4E+02 0.0087 24.7 8.3 53 147-199 54-107 (291)
499 TIGR01138 cysM cysteine syntha 24.7 3.1E+02 0.0068 25.6 7.5 52 147-199 60-113 (290)
500 PRK06182 short chain dehydroge 24.6 5.3E+02 0.011 23.3 10.1 94 147-246 4-104 (273)
No 1
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-57 Score=443.88 Aligned_cols=363 Identities=83% Similarity=1.322 Sum_probs=326.9
Q ss_pred cCCCCchHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHH
Q 014594 59 RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138 (422)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~l 138 (422)
..++..+++++.+.++.+|.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+.||+++..+||+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~i 95 (380)
T PLN03026 16 QSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAAL 95 (380)
T ss_pred ccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHHH
Confidence 34566778899999999997777788888888877788999999999999999999998764333568988889999999
Q ss_pred HHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC
Q 014594 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218 (422)
Q Consensus 139 a~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~ 218 (422)
++++++++++|++|+|+++++..++.+++++||+|+++.|+|..|...++..|++++.++.++++.+|++++++.+..++
T Consensus 96 a~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~ 175 (380)
T PLN03026 96 AEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHK 175 (380)
T ss_pred HHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999987778999999999984478
Q ss_pred CeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 219 PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
+++|++||||||||.+++.+++.+|++..+++|+||+|.+|.+.++.......++++++++||||.||++|+|+||++++
T Consensus 176 ~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~ 255 (380)
T PLN03026 176 PKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP 255 (380)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC
Confidence 99999999999999999999999999877899999999999865555555556789999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHH
Q 014594 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
+++++.+.+...+|+++.++|.++.++|++.+|++ .++.++++|+++.+.|+++++..+.|++++|+|++++++.++.+
T Consensus 256 ~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~ 335 (380)
T PLN03026 256 LSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAKK 335 (380)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHHH
Confidence 99999999888889999999999999999888888 88999999999999999988766788999999999976668899
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+.|.++||.++++...+.++++||+++.++++++|.++++++
T Consensus 336 ~~~~l~~~gI~v~~~~~~~~~~~lRis~~~~~~~~~l~~al~~~ 379 (380)
T PLN03026 336 LKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHCCeEEEECCCCCCCCEEEEecCCHHHHHHHHHHHHHh
Confidence 99999999999999876566789999999988899999999876
No 2
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-57 Score=434.31 Aligned_cols=341 Identities=47% Similarity=0.755 Sum_probs=308.9
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcC-CC
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE 145 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~-~~ 145 (422)
++.++++.+|+++ +++.|.+ ++++|++|+||+++++.+.+++.+ ....++||++...+++++++++++ ++
T Consensus 3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~ 74 (356)
T COG0079 3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD 74 (356)
T ss_pred chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence 4567778888653 3334443 689999999999999999988876 445589999999999999999999 88
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+++|++++|++++|..++++++.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+. .++++|++|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~-~~~~lv~i~ 152 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR-DKTKLVFLC 152 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh-cCCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999877 9999999999998 489999999
Q ss_pred CCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 226 ~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
|||||||..++.+++.++++. +.+||+||+|.+|+. .+....+..++|+++++||||+||++|+|+||++++++++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 999999999999999999986 789999999999997 5555555567889999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHH
Q 014594 303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
+.+.+.+.+|++|.+++.++.++|++.++++ .++.+.+.|+++.+.|+.++ +. +.|+.+||++++++... +..+.+
T Consensus 232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~-~~~l~~ 309 (356)
T COG0079 232 AALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAE-AAALAE 309 (356)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCcc-HHHHHH
Confidence 9999999999999999999999999999988 99999999999999999998 55 88999999999998534 668999
Q ss_pred HHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|.++||.+|.+.. +..++|+||++++++++++|.++++.+
T Consensus 310 ~L~~~giivR~~~~~~~~~~~lRitvgt~een~~ll~AL~~~ 351 (356)
T COG0079 310 ALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAALREV 351 (356)
T ss_pred HHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHHHHHHHHHHHH
Confidence 99999999999876 456789999999999999999999864
No 3
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-53 Score=413.12 Aligned_cols=341 Identities=32% Similarity=0.535 Sum_probs=295.6
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLES 146 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~ 146 (422)
+..+..+.+|.+........+.++ ..++|+|+.|+|++++++.+++++.+. .....||+.|..+||+++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~ 81 (366)
T PRK01533 4 KDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKM 81 (366)
T ss_pred hhhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCc
Confidence 345566666655544444444443 357899999999999999999998763 33356898899999999999999999
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
++|++|+|+++++.+++++++++||+|+++.|+|..|...++..|++++.++.+ ++.+|++.+++.++ ++++++++||
T Consensus 82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~ 159 (366)
T PRK01533 82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICN 159 (366)
T ss_pred ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeC
Confidence 999999999999999999999999999999999999999999999999999985 45799999999986 6899999999
Q ss_pred CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
||||||.+++.+++.+|++. +.++|+||+|.+|.+.. +....+..++++++++||||.||++|+|+||++++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~ 239 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEE 239 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHH
Confidence 99999999999999999875 56788999999887543 2334444568999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
+++.+.+...+|++|.++|.++.++|++++|.+ .++.++++++++.+.|+.++ +.+.+++++|+|++++ ++.++.
T Consensus 240 ~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~---~~~~~~ 315 (366)
T PRK01533 240 LIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE---NGGEIY 315 (366)
T ss_pred HHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC---CHHHHH
Confidence 999999888889999999999999999888888 88888899999999998886 5567889999999986 567899
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|+++||.|+++ ++++||++++.+++++|.++|+.+
T Consensus 316 ~~l~~~GI~Vr~~-----~~~iRis~~~~~~~~~l~~al~~~ 352 (366)
T PRK01533 316 EACAHAGFIIRPF-----PNGVRITVGTREQNEGVISVLQQH 352 (366)
T ss_pred HHHHHCCcEEccC-----CCceEEeCCCHHHHHHHHHHHHHH
Confidence 9999999999984 489999999999999999999764
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-53 Score=409.84 Aligned_cols=324 Identities=29% Similarity=0.456 Sum_probs=282.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~----~--~~~~~-i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++|+.+.+++.+ +..+ ++||..|..+||+++++++ + +++++ |++|+|+++++..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 6899999999999999999988876 4333 3447779999999999986 3 45665 9999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++|||+|++++|.|+.|....+..|++++.++.. .+|.+|++.++++++ +++|+|++|+||||||.+++.++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~-~ktk~i~ln~P~NPTGav~~~~~l~ 186 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT-PKTKAIILNSPNNPTGAVYSKEELK 186 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC-ccceEEEEeCCCCCcCcCCCHHHHH
Confidence 999999999999999999999999999999999953 489999999999998 5999999999999999999999999
Q ss_pred HHHcC----CCeEEEccCCccccCCCc-hhhhh--h-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC-
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES-RMEWV--K-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP- 311 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~--~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~- 311 (422)
+|++. +++||.||+|.++.+++. ..+.. . ..+++|+++||||.|+++|||+||++++ +++++.+.+.++.
T Consensus 187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~ 266 (393)
T COG0436 187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL 266 (393)
T ss_pred HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence 99885 999999999999998763 33222 2 2478999999999999999999999999 8888888766554
Q ss_pred -CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCc-cc-CCCceEEEEEeCCCCCHHHHHHHHH-
Q 014594 312 -YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLN-PY-PSYSNFILCEVTSGMDAKKLKDDLA- 383 (422)
Q Consensus 312 -~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~-p~~~~f~~~~~~~~~~~~~~~~~L~- 383 (422)
++.+.+.|.++.++|+.+ ++.+ +++.++++|+.+.+.|.+++++. .. |.+++|+|++++...|+.+|+..|+
T Consensus 267 ~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~ 346 (393)
T COG0436 267 TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLE 346 (393)
T ss_pred ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHH
Confidence 588999999999999986 3566 77899999999999999987444 45 6799999999986679999999988
Q ss_pred hCCcEEEeCCCCCC---CCeEEEEecChhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNNKEL---KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~~~~---~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++||.|.||..++. +++|||+++... +.++++++++
T Consensus 347 ~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl 385 (393)
T COG0436 347 EAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRL 385 (393)
T ss_pred hCCEEEecccccCCCCCCCeEEEEEecCH--HHHHHHHHHH
Confidence 77999999998654 489999999876 6788888876
No 5
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-52 Score=401.54 Aligned_cols=336 Identities=31% Similarity=0.542 Sum_probs=291.4
Q ss_pred hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCC
Q 014594 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144 (422)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~ 144 (422)
...+..+..+.+|.+... . .....++|+.|+||+++++.+ ......+||++...+|++++++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~ 72 (351)
T PRK01688 7 DLARENVRALTPYQSARR-------L--GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV 72 (351)
T ss_pred HHhhHHhhcCCCCCCCCc-------c--CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence 455677888888754321 1 123459999999999988754 22234779999889999999999999
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
++++|++|+|+++++.+++++++++| |.|+++.|+|..|...++..|++++.++.++++.+|++++++++ .++++|+
T Consensus 73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~ 150 (351)
T PRK01688 73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY 150 (351)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence 99999999999999999999999997 89999999999999999999999999998777899999999987 3799999
Q ss_pred EeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
+||||||||.+++.+++++|++. ++++|+||+|.+|....+....+..++++++++||||.||++|+|+||++++++
T Consensus 151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~ 230 (351)
T PRK01688 151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE 230 (351)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence 99999999999999999999875 689999999999985555555566678999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCCHH
Q 014594 301 IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAK 376 (422)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~~~ 376 (422)
+++.+.+...+|+++.+.+.++.++|.+. ++++ .++.++++|+++.+.|++++++ .+.|++++|+|++++ +++
T Consensus 231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~ 307 (351)
T PRK01688 231 VINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASS 307 (351)
T ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHH
Confidence 99999998889999999999999999864 5666 7888899999999999998665 378999999999985 578
Q ss_pred HHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHh
Q 014594 377 KLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 377 ~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
++.+.|+++||.++.+.. ++.++|+||++++.++++.|.++|+
T Consensus 308 ~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~~~~e~~~l~~al~ 351 (351)
T PRK01688 308 AVFKSLWDQGIILRDQNKQPGLSNCLRITIGTREECQRVIDALR 351 (351)
T ss_pred HHHHHHHHCCeEEEECCCcCCCCCeEEEeCCCHHHHHHHHHhhC
Confidence 999999999999998765 4667899999999999999988874
No 6
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-51 Score=399.98 Aligned_cols=346 Identities=40% Similarity=0.639 Sum_probs=301.0
Q ss_pred HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCC
Q 014594 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147 (422)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~ 147 (422)
+++....+|.+...+...+.+++.+ ++++|+.|++++++++.+.+++.+ +.....||+.+..++|++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~ 82 (359)
T PRK03158 5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE 82 (359)
T ss_pred hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence 3455566665555555566666653 789999999999999999999876 3333456888899999999999999999
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+|++|+|+++++..++++++++||.|+++.|+|+.|...+...|++++.++.+ ++++|++.+++.+. +++++++++||
T Consensus 83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p 160 (359)
T PRK03158 83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP 160 (359)
T ss_pred HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999976 67899999999886 68999999999
Q ss_pred CCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
|||||.+++.+++.++++. ++++|+||+|.+|.+++ ......+..+++++++||||.||++|+|+||+++++++
T Consensus 161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~ 240 (359)
T PRK03158 161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL 240 (359)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence 9999999999999999975 89999999999987543 23344456789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
++.+.+...+++.|.++|.++.++|++.+|.+ .++.++++++.+.+.|++++ +.+.|++|+|+|++++ .++.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~--~~~~~~~~ 317 (359)
T PRK03158 241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTG--RDANELFE 317 (359)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECC--CCHHHHHH
Confidence 99998888889999999999999999888888 78888999999999998885 4556788999999984 46889999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|.++||.++++..++.++++||+++.+++++++.++|+++
T Consensus 318 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 318 ALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHCCeEEeeCCCCCCCCeEEEecCCHHHHHHHHHHHHHh
Confidence 99999999999887766789999999999999999999875
No 7
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-51 Score=395.68 Aligned_cols=341 Identities=33% Similarity=0.507 Sum_probs=291.4
Q ss_pred HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCC
Q 014594 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH 148 (422)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~ 148 (422)
++....+|.++.....++++++..+.++++|+.|+|+++++|.+.+++.+ ......||+.+..+||+++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~ 84 (357)
T PRK14809 5 DLSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQ 84 (357)
T ss_pred hhhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcce
Confidence 34445555455556667788877777899999999999999999988876 33346788888999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
|++|+|+++++.+++++++++||.|++++|+|..|...+...|++++.++.+ +++.+|++++++.. .++|+|++||
T Consensus 85 I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~--~~~k~i~l~~ 162 (357)
T PRK14809 85 VWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY--DGERIVYLTS 162 (357)
T ss_pred EEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh--cCCcEEEEeC
Confidence 9999999999999999999999999999999998888888899999888853 46778888887765 3689999999
Q ss_pred CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
||||||.+++.+++.+|++. ++++|+||+|.+|.+.++........+++++++||||.||++|+|+||+++++++++
T Consensus 163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~ 242 (357)
T PRK14809 163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWAD 242 (357)
T ss_pred CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHH
Confidence 99999999999999999875 789999999999987555444455568999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.+.+...+++.+.++|.++..+|++.+|++ .++.++++++.+.+.|+... .|++|+|+|++++ +.+++.+.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~---~~~~~~~~l 315 (357)
T PRK14809 243 AYARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVG---DASAVAEAA 315 (357)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECC---CHHHHHHHH
Confidence 999888788999999999999998888888 88899999999999997642 3688999999985 578899999
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014594 383 AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 383 ~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
.++||.++++..++.++++||+++.++++++..++|+
T Consensus 316 ~~~gv~v~~g~~f~~~~~iRls~~~~~~~~~~l~~L~ 352 (357)
T PRK14809 316 QERGVIVRDCTSFGLPECIRITCGTREETERAVEVLN 352 (357)
T ss_pred HHCCEEEEECccCCCCCeEEEecCCHHHHHHHHHHHH
Confidence 8999999999877667899999987655444444444
No 8
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-50 Score=391.64 Aligned_cols=350 Identities=36% Similarity=0.631 Sum_probs=300.5
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCC
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGL 144 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~ 144 (422)
.++..+..+.+|.+...+...+..++ +.++|+|+.|+|++++++.+.+++.+. .....||++...+||+++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~ 86 (371)
T PRK05166 9 LARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGV 86 (371)
T ss_pred hhhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCc
Confidence 34556667777766666666665554 457899999999999999999988763 334678877546999999999999
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.++.+.++++|++++++.++ +++|++++
T Consensus 87 ~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l 165 (371)
T PRK05166 87 PADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMF 165 (371)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999987778999999999986 58899999
Q ss_pred eCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeec
Q 014594 225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
+|||||||.+++.+++.+|++. ++++|+||+|.+|.++. +...... ..+++++++||||.||++|+|+||+++
T Consensus 166 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 166 SNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 9999999999999999999875 78999999999988543 2222232 346899999999999999999999775
Q ss_pred -CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594 298 -PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 375 (422)
Q Consensus 298 -~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~ 375 (422)
++++++.+.+....++++.+.|.++.++|.+.+|++ .++.++++++.+.+.|++++ +.+.|++|+|+|++++ .++
T Consensus 246 ~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p~~g~fl~~~~~--~~~ 322 (371)
T PRK05166 246 SDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIAPSRANFLFFDAR--RPA 322 (371)
T ss_pred CCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCCCcCCEEEEeCC--CCH
Confidence 788989888877788999999999999998888888 88899999999999999886 4567888999999975 367
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.+.|.++||.++++..++..+++||+++.++++++|.++++++
T Consensus 323 ~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 323 SAVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred HHHHHHHHHCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 8999999999999999876666899999999988899999999875
No 9
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-49 Score=387.33 Aligned_cols=338 Identities=34% Similarity=0.530 Sum_probs=286.8
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~ 145 (422)
.+++.+.++.+|.+... ......++++.|++++++++... .....||+++..+||++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ne~~~~~~~~~~------~~~~~Y~~~~~~~lr~~ia~~~~~~ 75 (364)
T PRK04781 11 LVREDLRAFAGYSSARS---------SALQGDVWLNANESAWANPADPD------ASTRRYPDPQPPGLRSALAALYGCA 75 (364)
T ss_pred HhhHHhhcCCCCCCCCc---------cccCCCEEeeCCCCCCCCChhhc------chhccCCCCCHHHHHHHHHHHhCcC
Confidence 34566666666633211 01124689999999998876421 1236788888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeE
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKC 221 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~ 221 (422)
+++|++|+|+++++.+++.+++.+| |.|+++.|+|..|...++..|++++.++.+ +++.+|++++++.+.++++++
T Consensus 76 ~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~l 155 (364)
T PRK04781 76 PEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKL 155 (364)
T ss_pred hHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeE
Confidence 9999999999999999999999999 799999999999999889999999999963 346689999877654478999
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
|+++|||||||.+++.+++.++++. ++++|+||+|.+|.+..+.....+..+++++++||||.||++|+|+||++++
T Consensus 156 v~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~ 235 (364)
T PRK04781 156 VFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN 235 (364)
T ss_pred EEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC
Confidence 9999999999999999999999875 7899999999999865555555566789999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCC
Q 014594 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMD 374 (422)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~ 374 (422)
+++++.+.+...+++++.+.|.++..+|+++. +.. .++.++++|+.+.+.|++++.+ .+.|++|+|+|++++ +
T Consensus 236 ~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~ 312 (364)
T PRK04781 236 AELIAVLRRCQAPYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---D 312 (364)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---C
Confidence 99999999998899999999999999998863 444 6667899999999999998544 367899999999996 5
Q ss_pred HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 375 AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+++.+.|.++||.|+++.. ++.++|+||+++.++++++|.++++.+
T Consensus 313 ~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~~~~~~~~l~~al~~~ 360 (364)
T PRK04781 313 AEAAFQALLAAGVVVRDQRAAPRLSDALRITLGTPEQNDRVLAALQRT 360 (364)
T ss_pred HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCCCHHHHHHHHHHHHHH
Confidence 78899999999999999875 455789999999999999999999875
No 10
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.3e-49 Score=386.89 Aligned_cols=334 Identities=31% Similarity=0.447 Sum_probs=284.0
Q ss_pred hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
....+...+.+..++++|+.|+|++++++.+.+++.+ +.....||+++..+||+++++++++++++|++|+|+++++.+
T Consensus 10 ~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~ 89 (360)
T PRK07392 10 LAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTW 89 (360)
T ss_pred HHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 3334555666677899999999999999999998876 333467887777899999999999999999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCC-----CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~-----~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+++.+. +||.|+++.|+|..|...++..|++++.++.+.+.. .|++.+++.. .++++++++|||||||.+++
T Consensus 90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~ 166 (360)
T PRK07392 90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWS 166 (360)
T ss_pred HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcC
Confidence 999764 688999999999999999999999999999754332 4677776654 46899999999999999999
Q ss_pred HHHHHHHHcCCCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594 237 DEDLLKILEMPILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (422)
Q Consensus 237 ~e~l~~i~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~ 313 (422)
.+++.++++...++|+||+|.+|.+++ +........+++++++||||.||++|+|+||+++++++++.+.+....++
T Consensus 167 ~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~ 246 (360)
T PRK07392 167 REAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDPWP 246 (360)
T ss_pred HHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCCCC
Confidence 999999998733577799999997643 22333455678999999999999999999999999999999988777789
Q ss_pred CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014594 314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH 391 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~ 391 (422)
+|.+.|.++.++|++.+|.+ .++.++++++.+.+.|++++++.+.+++++|+|++++. ++.++.+.++ ++||.+++
T Consensus 247 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~p 324 (360)
T PRK07392 247 VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQG--SALQLQEKLLQQHRILIRD 324 (360)
T ss_pred CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEe
Confidence 99999999999999888888 77889999999999999886666778889999999863 6788888864 78999999
Q ss_pred CCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 392 YNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 392 ~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+..++ .++|+||+++.++++++|.++++++
T Consensus 325 g~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 325 CLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred CCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 98743 3579999999988889999999875
No 11
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-49 Score=387.14 Aligned_cols=323 Identities=38% Similarity=0.622 Sum_probs=286.6
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCC
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDP 169 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~ 169 (422)
+.++++|+.|+|++++++.+++++.+ +. ...+||+++..+||+++++++++++ ++|++|+|+++++..++++++++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~ 104 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKP 104 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCC
Confidence 35789999999999999999999986 32 2367888888999999999999865 48999999999999999999999
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CC
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI 248 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~ 248 (422)
||+|+++.|+|..|...++..|++++.++.++++++|++.+++.+.+.++++|+++|||||||.+++.+++++|++. +.
T Consensus 105 gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~ 184 (356)
T PRK04870 105 GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPG 184 (356)
T ss_pred CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCC
Confidence 99999999999999999999999999999877789999999999975689999999999999999999999999987 88
Q ss_pred eEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccC
Q 014594 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (422)
Q Consensus 249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~ 328 (422)
++|+||+|.+|.+.. ....+...+++++++|||| ++++|+|+||+++++++++.+.....+++++.++|.++..++++
T Consensus 185 ~ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~ 262 (356)
T PRK04870 185 LVVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH 262 (356)
T ss_pred EEEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhC
Confidence 999999999887532 2333455678999999999 89999999999999999999988877889999999999999987
Q ss_pred ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCeEEEEe
Q 014594 329 PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGYVRVSV 405 (422)
Q Consensus 329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--~~~~~iRis~ 405 (422)
.++++ .+++++++++.+.+.|++++.+.+.|.+++|+|++++ +.+++.+.|.++||.|+++..+ ..++++||++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~ 339 (356)
T PRK04870 263 VDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTV 339 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeC
Confidence 66777 8888999999999999988556667889999999986 5788999999999999998763 3478999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014594 406 GKPEHTDALMECLMHL 421 (422)
Q Consensus 406 ~~~~~~~~l~~al~~l 421 (422)
++++++++|.++|+.+
T Consensus 340 ~~~~~~~~l~~al~~~ 355 (356)
T PRK04870 340 GTPEENAQFLAALKAA 355 (356)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999875
No 12
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-49 Score=387.97 Aligned_cols=318 Identities=32% Similarity=0.546 Sum_probs=270.3
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCCcchHHHHHHHHHHcC--------CCCCCEEEeCCHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~y~~~~~~~lr~~la~~~~--------~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++|+.|++++++++.+.+++.+ +.. ..+||+.|..+||++++++++ +++++|++|+|+++++..++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL 108 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence 479999999999999999999876 222 256888889999999999986 78899999999999999888
Q ss_pred HHhcCCCC-EEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e 238 (422)
.+++.+|| .|+++.|+|..|...++..|++++.++.+. ++++|++++++++++ +++|+|++||||||||.+++.+
T Consensus 109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~ 188 (374)
T PRK02610 109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA 188 (374)
T ss_pred HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence 88888886 899999999999999999999999999654 589999999998864 5899999999999999999999
Q ss_pred HHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcH
Q 014594 239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV 316 (422)
Q Consensus 239 ~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~ 316 (422)
+++++++. +++||+||+|.+|.+. .....+...+++|+++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus 189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~ 267 (374)
T PRK02610 189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS 267 (374)
T ss_pred HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence 99999876 8999999999998753 23334445678899999999999999999999999999999988887899999
Q ss_pred HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014594 317 AAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK 395 (422)
Q Consensus 317 ~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~ 395 (422)
+.|.++..+|++. .+.+..+++.+.|+.+.+.|++++.+.+.|++|+|+|++++.+.+..++++.|+++||.++++
T Consensus 268 ~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~--- 344 (374)
T PRK02610 268 FSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHT--- 344 (374)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeC---
Confidence 9999999999875 444433344455788889998876556678999999999987678899999999999999875
Q ss_pred CCCCeEEEEecChhhHHHHHHHHh
Q 014594 396 ELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 396 ~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
++++||+++.++++++..+.|+
T Consensus 345 --~~~lRls~~~~~~~~~~l~~l~ 366 (374)
T PRK02610 345 --GGGLRITIGTPEENQRTLERLQ 366 (374)
T ss_pred --CCeEEEeCCCHHHHHHHHHHHH
Confidence 3799999998665444444443
No 13
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-49 Score=382.49 Aligned_cols=340 Identities=37% Similarity=0.630 Sum_probs=291.5
Q ss_pred hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHH
Q 014594 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKD 141 (422)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~ 141 (422)
++.+..+.++.+|-.. .....++|+.|++++++|+.+.+++.+ +. ...+|++++..++|++++++
T Consensus 4 ~~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~ 71 (351)
T PRK14807 4 NLVREEIKGFKNYEVH------------SIPYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARY 71 (351)
T ss_pred hHHHHHHhhcCCCCCC------------CCCceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHH
Confidence 3456666666766210 112358999999999999999999876 22 23668877788999999999
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeE
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC 221 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 221 (422)
+++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++.++++++|++.+++.+++.++|+
T Consensus 72 ~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~ 151 (351)
T PRK14807 72 CSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKL 151 (351)
T ss_pred hCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCE
Confidence 99999999999999999999999999999999999999999999889999999999987778999999999997558999
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
|+++|||||||.+++.+++.++++. +.++|+||+|.+|. +..........+++++++||||.||++|+|+||++++++
T Consensus 152 v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~ 230 (351)
T PRK14807 152 VFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANEN 230 (351)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHH
Confidence 9999999999999999999999987 78899999999885 333333344568999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
+++.+......++.+.+.|.++..+|+++ +.+ ..+.++++++.+.+.|++++++.+.|++++|+|++++ +.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~---~~~~~~ 306 (351)
T PRK14807 231 ILKYLNLVKSPYNINSLSQVIALKVLRTG-VLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVY 306 (351)
T ss_pred HHHHHHHccCCCCcCHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC---CHHHHH
Confidence 99999888778889999999999999874 455 7778889999999999887556667888999999996 578899
Q ss_pred HHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|.++||.++++.. .+.++++||+++.++++++|.++|+++
T Consensus 307 ~~l~~~gV~v~~~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 307 QGLLERGILVRDFSKVEGLEGALRITVSSCEANDYLINGLKEL 349 (351)
T ss_pred HHHHHCCEEEEECCCCCCCCCeEEEEcCCHHHHHHHHHHHHHh
Confidence 999999999998764 455789999999999899999999875
No 14
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-49 Score=385.90 Aligned_cols=335 Identities=30% Similarity=0.463 Sum_probs=284.9
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~ 145 (422)
..+..+..+.+|.+.. +....+.++|+.|+|++++++.+ ......+||+++..+||+++++++|++
T Consensus 11 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~ 76 (354)
T PRK04635 11 LARPELLALTPYQSAR---------RIGGRGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVA 76 (354)
T ss_pred HhhHHhhcCCCCCCCC---------CcCCCCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcC
Confidence 4556666666664321 11234569999999999988654 111236799888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
+++|++|+|+++++.+++++++++| |+|+++.|+|..|...++..|++++.+|.++++.+|++.+++ + .++|+|++
T Consensus 77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i 153 (354)
T PRK04635 77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFI 153 (354)
T ss_pred HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEE
Confidence 9999999999999999999999999 899999999999999999999999999987778899998873 3 58999999
Q ss_pred eCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
||||||||.+++.+++.+|++. +++||+||+|.+|....+........+++++++||||.||++|+|+||++++++++
T Consensus 154 ~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~ 233 (354)
T PRK04635 154 CNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI 233 (354)
T ss_pred eCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH
Confidence 9999999999999999999986 79999999999987544444444567899999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594 303 EYLWRAKQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
+.+.....+++.+.+.|.++.++|.+. ++++ .++.++++|+.+.+.|++++.+.+.|++++|+|++++ +.+++.
T Consensus 234 ~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~ 310 (354)
T PRK04635 234 EILMRVIAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD---DVDAVF 310 (354)
T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC---CHHHHH
Confidence 999887778999999999999999764 4455 7778899999999999998756667788999999986 577888
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+.|.++||.++.+..+..++++|||+++.++++.|.++++.
T Consensus 311 ~~l~~~gv~v~~~~~~~~~~~lRis~~~~e~~~~l~~al~~ 351 (354)
T PRK04635 311 KALWDAGIVARAYKDPRLANCIRFSFSNRAETDKLIGLIRN 351 (354)
T ss_pred HHHHHCCEEEEECCCCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 88889999999876555678999999999999999999975
No 15
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.5e-49 Score=382.50 Aligned_cols=333 Identities=28% Similarity=0.514 Sum_probs=287.1
Q ss_pred chHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 82 PFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
....++++.|....++++|+.|++++++++.+.+++.+ .....+||+++..+||+++++++++++++|++|+|+++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~ 85 (354)
T PRK06358 6 NINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIF 85 (354)
T ss_pred cHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHH
Confidence 34556777887767789999999999999999999886 33346788888889999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
.+++++ .+ +.|+++.|+|+.|...++..|++++.++.+ .++.+| +++++.+. .+++++++++||||||.+++.+
T Consensus 86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~~~ 161 (354)
T PRK06358 86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLISKE 161 (354)
T ss_pred HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccCHH
Confidence 999976 44 689999999999999999999999999964 357788 66666665 5799999999999999999999
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ 310 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~ 310 (422)
++.+|++. ++++|+||+|.+|.+++. .....+..+++++++||||.||++|+|+||++++ +.+++.+.+...
T Consensus 162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~ 241 (354)
T PRK06358 162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE 241 (354)
T ss_pred HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence 99998764 899999999999986542 2333445689999999999999999999999984 788899988888
Q ss_pred CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594 311 PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI 389 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v 389 (422)
.++++.+.|.++..+|++++|++ .++.++++++.+.+.|++++.+.+.+++|+|+|++++ +..++++.|.++||.+
T Consensus 242 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gI~v 318 (354)
T PRK06358 242 PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLE---KPIDLRKELLKKGILI 318 (354)
T ss_pred CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcC---chHHHHHHHHHCCeEE
Confidence 89999999999999998878877 8889999999999999988656666778899999997 3478999999999999
Q ss_pred EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 390 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 390 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++++.+ + .++++||+++.++++++|.++++++
T Consensus 319 ~~~~~f~~~~~~~iRls~~~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 319 RSCSNYRGLDENYYRVAVKSREDNKKLLKALEVI 352 (354)
T ss_pred EECCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 999875 3 3579999999999999999999875
No 16
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.2e-49 Score=384.00 Aligned_cols=349 Identities=36% Similarity=0.595 Sum_probs=302.1
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES 146 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~ 146 (422)
++++.++.+|.+...+...++++ .+.++++|+.|++++++++.+++++.+ ......||+....+||+++++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~ 84 (367)
T PRK02731 7 NPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVDP 84 (367)
T ss_pred hhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcCH
Confidence 45566677775555556566665 457799999999999999999888876 333367887777899999999999999
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
++|++|+|+++++..++.+++++||.|+++.|+|..|...++..|++++.++. +++++|++.+++.++ +++++|+++|
T Consensus 85 ~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~~ 162 (367)
T PRK02731 85 ERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIAN 162 (367)
T ss_pred HHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEeC
Confidence 99999999999999999999999999999999999998888889999999997 567899999999997 6899999999
Q ss_pred CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
||||||.+++.+++.++++. ++++|+||+|.++.+.+ ......+..+++++++||||.||++|+|+||++++++
T Consensus 163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 242 (367)
T PRK02731 163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE 242 (367)
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHH
Confidence 99999999999999999975 89999999999877532 2233344567899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
+++.+.+...+++.+.+.|.++.++|++.++.+ .++.++++++.+.+.|++++ +...+++++|+|++++...++.++.
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~i~~~~~~~~~~~~ 321 (367)
T PRK02731 243 IIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPSVGNFILVDFDDGKDAAEAY 321 (367)
T ss_pred HHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCceEEEEECCCCCCHHHHH
Confidence 999998888888899999999999999878877 88899999999999999886 4455778999999997667899999
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|.++||.++++..++.++++||++++.++++++.++++++
T Consensus 322 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~e~~~l~~aL~~~ 363 (367)
T PRK02731 322 QALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAALKEF 363 (367)
T ss_pred HHHHHCCEEEEeCCCCCCCCeEEEecCCHHHHHHHHHHHHHH
Confidence 999999999999876555789999999999999999998764
No 17
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-49 Score=383.85 Aligned_cols=324 Identities=32% Similarity=0.506 Sum_probs=282.3
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
..++|+.|++++++++.+.+++.+ .....+|++++..+||+++++++++++++|++|+|+++++..++..++++||.|+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl 112 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV 112 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence 357999999999999999999876 3333678877789999999999999999999999999999999999999999999
Q ss_pred EcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEE
Q 014594 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV 251 (422)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li 251 (422)
++.|+|+.+...++..|++++.+|.+.+ ..|++++++.+.++++++|++++||||||.+++.+++.++++. +++||
T Consensus 113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI 191 (369)
T PRK08153 113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV 191 (369)
T ss_pred ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 9999999999888889999999997544 6899999887765789999999999999999999999999875 89999
Q ss_pred EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH
Q 014594 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (422)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~ 331 (422)
+||+|.+|.+++.........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++++|
T Consensus 192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~ 271 (369)
T PRK08153 192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY 271 (369)
T ss_pred EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence 99999998865433333334678999999999999999999999999999999988888899999999999999998888
Q ss_pred HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014594 332 LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 409 (422)
Q Consensus 332 ~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~ 409 (422)
++ .++.++++++.+.+.|++.+. ...|++++|+|++++. ...+.++.+.|.++||.++.......++++||+++.++
T Consensus 272 ~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~~~~ 350 (369)
T PRK08153 272 LAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDE 350 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecCCHH
Confidence 88 889999999999999998864 4568899999999852 35678999999999999964332334679999999999
Q ss_pred hHHHHHHHHhhh
Q 014594 410 HTDALMECLMHL 421 (422)
Q Consensus 410 ~~~~l~~al~~l 421 (422)
+++.+.++++.+
T Consensus 351 ~~~~~~~al~~~ 362 (369)
T PRK08153 351 ELDLFAEALPEA 362 (369)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 18
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.1e-49 Score=382.22 Aligned_cols=348 Identities=43% Similarity=0.700 Sum_probs=302.4
Q ss_pred HHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE 145 (422)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~ 145 (422)
+.+++..+.+|.+........++++.++.++|+|+.|+|+++++|.+.+++.+ ......||++...++|++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~ 85 (361)
T PRK00950 6 IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGVP 85 (361)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCC
Confidence 45677777888766667777788887777999999999999999999888876 33336788777799999999999999
Q ss_pred CCCEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 146 SDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 146 ~~~i~~-~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
+++|++ |+|+++++..+++.++++||.|+++.|+|..+...++..|++++.++.++++.+|++.+++.+. .+++++++
T Consensus 86 ~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~ 164 (361)
T PRK00950 86 VENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFL 164 (361)
T ss_pred HHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEEE
Confidence 999999 7999999999999899999999999999999988888999999999977778999999999986 68999999
Q ss_pred eCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
++|+||||.+++.+++.++++. |+++|+||+|.+|.. .+........+++++++||||.||++|+|+||+++++++++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 9999999999999999999987 999999999998873 23333344567899999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.+.+...+++.+.+.+.++..+|++.+|++ .+++++++++.+.+.|+ +.+.+++++|+|++++ +.++.++.+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~~~~~~~~~~l 318 (361)
T PRK00950 244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-PMTAKEFCEEL 318 (361)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-CCCHHHHHHHH
Confidence 999888888899999999999999888877 88888899999988886 3346788999999994 56899999999
Q ss_pred HhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 AKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++||.++++..+ ..++++||++++.++++++.++|+++
T Consensus 319 ~~~gv~v~~~~~f~~~~~~~lRis~~~~~~~~~l~~~L~~i 359 (361)
T PRK00950 319 LKRGVIVRDCTSFRGLGDYYIRVSIGTFEENERFLEILKEI 359 (361)
T ss_pred HHCCEEEeeCCccCCCCCCeEEEECCCHHHHHHHHHHHHHH
Confidence 9999999987753 23579999999988899999998764
No 19
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.1e-49 Score=383.05 Aligned_cols=321 Identities=30% Similarity=0.438 Sum_probs=279.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~ 172 (422)
.++.++|+.|+|+++++|.+.+++.+ ......||+++..+||+++++++|+++++|++|+|+++++..++.+++++||+
T Consensus 42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~ 121 (370)
T PRK09105 42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAG 121 (370)
T ss_pred CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCE
Confidence 46789999999999999999999876 32335688777899999999999999999999999999999999999999999
Q ss_pred EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCe
Q 014594 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL 249 (422)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~ 249 (422)
|++++|+|..|...++..|++++.++.+.++.+|++.+++. . ++++++++||||||||.+++.++++++++. +++
T Consensus 122 Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~-~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~ 199 (370)
T PRK09105 122 LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D-PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSV 199 (370)
T ss_pred EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C-CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcE
Confidence 99999999999999999999999999877788999999887 3 578999999999999999999999999864 899
Q ss_pred EEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (422)
Q Consensus 250 li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~ 329 (422)
+|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+... ..++.+.+.|.++.++|.+.
T Consensus 200 lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~ 278 (370)
T PRK09105 200 LLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDP 278 (370)
T ss_pred EEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH
Confidence 99999999886544334444457899999999999999999999999999999998877 56678889999999999988
Q ss_pred hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014594 330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 408 (422)
Q Consensus 330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~ 408 (422)
+|++ .++.++++++.+.+.|++++ +.+.+++++|++++++ .+..++.+.|.++||.+.... ...++++||+++++
T Consensus 279 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~f~~~~~~--~~~~~l~~~L~~~gI~v~~~~-~~~~~~~Ris~~~~ 354 (370)
T PRK09105 279 KLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQANCFMVDVK--RPAKAVADAMAKQGVFIGRSW-PIWPNWVRVTVGSE 354 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCcEEEEeCC--CCHHHHHHHHHHCCcEEecCC-CCCCCeEEEEcCCH
Confidence 8888 88899999999999999986 4556677778788874 478899999998999994322 23468999999998
Q ss_pred hhHHHHHHHHhhh
Q 014594 409 EHTDALMECLMHL 421 (422)
Q Consensus 409 ~~~~~l~~al~~l 421 (422)
+++++|.++++.+
T Consensus 355 ~~~~~l~~al~~~ 367 (370)
T PRK09105 355 EEMAAFRSAFAKV 367 (370)
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999865
No 20
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.4e-49 Score=380.83 Aligned_cols=336 Identities=26% Similarity=0.423 Sum_probs=284.6
Q ss_pred CCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHH
Q 014594 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158 (422)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~a 158 (422)
+......+.+++.++.++++|+.|+|++++++.+++++.+ +.....||+.+..+||+++++++++++++|++|+|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 5 GGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETES 84 (356)
T ss_pred CccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence 3445556777887778899999999999999999999876 333357888788999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+..+++.+ .+|+ +++..|+|..|...++..|++++.++.+ +++.+| +++++.+. +++|+++++|||||||.+++
T Consensus 85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~~ 160 (356)
T PRK08056 85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLPE 160 (356)
T ss_pred HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCCC
Confidence 99999976 6776 7778999999999999999999999964 345566 45556665 78999999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCC-chhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ 310 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~ 310 (422)
.+++++|++. ++++|+||+|.+|.++. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+...
T Consensus 161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~ 240 (356)
T PRK08056 161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM 240 (356)
T ss_pred HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence 8888777653 89999999999987544 2333344567899999999999999999999998 5678888888777
Q ss_pred CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594 311 PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI 389 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v 389 (422)
+++++.++|.++..+|++++|.. .++.++++++++.+.|++++.+.+.+++++|+|++++. +..++++.|+++||.+
T Consensus 241 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v 318 (356)
T PRK08056 241 PWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCER--PDIDLQRALLTQRILI 318 (356)
T ss_pred CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCC--ChHHHHHHHHHCCeEE
Confidence 88899999999999998878887 88999999999999999886566677889999999863 4678999999999999
Q ss_pred EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 390 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 390 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++..+ + ..++|||+++.+++++.|.++|+++
T Consensus 319 ~~~~~f~~~~~~~iRis~~~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 319 RSCANYPGLDSRYYRVAIRSAAENERLLAALRNV 352 (356)
T ss_pred EECCCCCCCCCCEEEEEEcCHHHHHHHHHHHHHH
Confidence 998864 2 2479999999999999999999875
No 21
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-50 Score=344.91 Aligned_cols=351 Identities=60% Similarity=0.938 Sum_probs=315.9
Q ss_pred CCchHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Q 014594 62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD 141 (422)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~ 141 (422)
+..++++++..+...|+++..++....++|+ +++.++.++++..|+|+- +...+.||++....++.+++..
T Consensus 11 ~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~d 81 (375)
T KOG0633|consen 11 MGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQD 81 (375)
T ss_pred ccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhcccC
Confidence 4566889999999999999999888888875 679999999999888864 3445778999889999999988
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CC
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KP 219 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~ 219 (422)
-++++++|.++.|+.|.++.++++.|.|| ++|+...|+|.+|...+...+++++.+|.+.+|.+|.|++.+.++.+ .+
T Consensus 82 kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i 161 (375)
T KOG0633|consen 82 KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI 161 (375)
T ss_pred CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence 88999999999999999999999999999 89999999999999999999999999999999999999999998654 89
Q ss_pred eEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 220 KCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
|++++++|+||||..+..+.+.+|.+. +.++++||+|.+|++..+.+.++..++|++++.+|||.||++|+|+||-.+
T Consensus 162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~ 241 (375)
T KOG0633|consen 162 KCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF 241 (375)
T ss_pred eEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecccc
Confidence 999999999999999999999999997 899999999999998889999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC
Q 014594 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG 372 (422)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~ 372 (422)
+.++++.+++.++||+.|..+..+|.++|++ ..+++ .++.+.+.|.+|...|.+++++. +.+..+||+++++.++
T Consensus 242 ~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~ 321 (375)
T KOG0633|consen 242 PLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGG 321 (375)
T ss_pred cHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCC
Confidence 9999999999999999999999999999995 56777 99999999999999999998876 5677889999999744
Q ss_pred CC--HHHH-HHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 MD--AKKL-KDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~--~~~~-~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+ +..+ .+.+.+.||.||+.+. .++.|++||++++++++..|.+.++.+
T Consensus 322 ~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 322 DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccchHHHHHHHhh
Confidence 22 2333 3444589999998776 678999999999999999999998864
No 22
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-48 Score=379.46 Aligned_cols=319 Identities=32% Similarity=0.575 Sum_probs=278.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~ 172 (422)
.++|+|+.|++++++++.+.+++.+. . ....||+++..+||+++++++++++++|++|+|+++++.+++++++++||+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~ 103 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP 103 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 56899999999999999999998763 2 236788888899999999999999999999999999999999999999999
Q ss_pred EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeE
Q 014594 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV 250 (422)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~l 250 (422)
|++++|+|+.|...++..|++++.++.++++.+|++++++ ++++++++|||||||.+++.+++.+|++. ++++
T Consensus 104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l 178 (353)
T PRK05387 104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV 178 (353)
T ss_pred EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence 9999999999999899999999999987788899999863 35789999999999999999999999976 8999
Q ss_pred EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC---CCCCcHHHHHHHHHHcc
Q 014594 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQ 327 (422)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~aa~~~L~ 327 (422)
|+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+... .++++.+.|.++.++|.
T Consensus 179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 999999988532 33334445688999999999999999999999999999999887764 36788999999999998
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
+.++.+ .++++.++++.+.+.|+++++ .+.|++++|+|++++ +.+++++.+.|.++||.++++..+..++++||+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~ 335 (353)
T PRK05387 258 DEAYFEETRAKVIATRERLVEELEALGF-EVLPSKANFVFARHP-SHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG 335 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCcCcEEEEECC-CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC
Confidence 878877 888999999999999999864 556788999999987 56789999999999999987755445789999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014594 407 KPEHTDALMECLMHL 421 (422)
Q Consensus 407 ~~~~~~~l~~al~~l 421 (422)
..++++++.++|+++
T Consensus 336 ~~~~~~~~~~~L~~~ 350 (353)
T PRK05387 336 TDEEMEALVDALKEI 350 (353)
T ss_pred CHHHHHHHHHHHHHH
Confidence 888888888888764
No 23
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-48 Score=384.34 Aligned_cols=327 Identities=23% Similarity=0.343 Sum_probs=275.9
Q ss_pred CCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHH
Q 014594 92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELIDL 161 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~ 161 (422)
..+.++++|+.|++++++++.+.+++.+. . ..+.|+..|..+||++++++++ +++ ++|++|+|+++++..
T Consensus 29 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 108 (399)
T PRK07681 29 AAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVH 108 (399)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHH
Confidence 34567899999999999999998888762 2 2245666789999999999973 577 799999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++.+++++||.|+++.|+|+.|...++..|++++.++.++ +|.+|++++++.+. .++|+|+++|||||||.+++.++
T Consensus 109 ~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~~~ 187 (399)
T PRK07681 109 LPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHEDF 187 (399)
T ss_pred HHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCHHH
Confidence 9999999999999999999999999999999999999643 46789999999886 68999999999999999999999
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc-hhh--hh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES-RME--WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~-~~~--~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~- 310 (422)
+++|++. +++||+||+|.+|.+++. ... .. ...+++|+++||||.||++|+|+||+++++++++.+.....
T Consensus 188 ~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~ 267 (399)
T PRK07681 188 FKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSN 267 (399)
T ss_pred HHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhh
Confidence 8888764 999999999999875432 111 12 23468999999999999999999999999999999987764
Q ss_pred -CCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014594 311 -PYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG 386 (422)
Q Consensus 311 -~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~g 386 (422)
.++++.+.|.++..+|++. .|++ .++.++++++.+.+.|+++++....|.+|+|+|++++++.++.++.+.|++ +|
T Consensus 268 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~g 347 (399)
T PRK07681 268 TDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRAN 347 (399)
T ss_pred cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCC
Confidence 5788999999999999885 6777 888999999999999999864334688899999999877788999999885 89
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.++++..++ .++++||+++.+ .+++.+++++|
T Consensus 348 v~v~pg~~f~~~~~~~iRis~~~~--~~~~~~~l~~l 382 (399)
T PRK07681 348 VVVTPGHAFGPHGEGFVRIALVQD--EEVLQQAVENI 382 (399)
T ss_pred EEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9999987643 357999999864 35677777665
No 24
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-48 Score=370.69 Aligned_cols=311 Identities=31% Similarity=0.482 Sum_probs=269.8
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~---~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
+.++++|+.|+|++++++.+++++.+ +. ..+.||+++..+||++++++++ +++++|++|+|+++++.++++++
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~- 96 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF- 96 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence 46789999999999999999998876 22 2245787789999999999998 88999999999999999999977
Q ss_pred CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCC
Q 014594 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~ 247 (422)
|.|++++|+|..|...++..|++++.+|.++++.++... + .++++++++|||||||.+++.+++.+|++.+
T Consensus 97 ---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~~ 167 (335)
T PRK14808 97 ---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKTG 167 (335)
T ss_pred ---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhcC
Confidence 679999999999999999999999999987666655332 2 3568999999999999999999999999889
Q ss_pred CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~ 327 (422)
++||+||+|.+|.. .+....+...+++++++||||.|+++|+|+||+++++++++.+.+.+.+++.+.++|.++..+++
T Consensus 168 ~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~ 246 (335)
T PRK14808 168 AFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALD 246 (335)
T ss_pred CEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence 99999999999863 23334445567999999999999999999999999999999998888789999999999999998
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
+.++.. .++.+.++++.+.+.|++++ +.+.+++|+|+|++++ +.+..++.+.|.++||.|+.+. +++||+++
T Consensus 247 ~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~l~-~~~~~~~~~~l~~~Gi~V~~~~-----~~~Risi~ 319 (335)
T PRK14808 247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFIFME-KEEKERLLEHLRAKNIAVRSFR-----EGVRITIG 319 (335)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCeEEEEeCC-CccHHHHHHHHHHCCeEEEECC-----CCeEEecC
Confidence 766666 77788888999999999986 5566778999999997 4466889999999999999753 68999999
Q ss_pred ChhhHHHHHHHHhhhC
Q 014594 407 KPEHTDALMECLMHLY 422 (422)
Q Consensus 407 ~~~~~~~l~~al~~l~ 422 (422)
.+++++++.++|+.++
T Consensus 320 ~~~~~~~~~~~l~~~~ 335 (335)
T PRK14808 320 KREENDMILKELEVFK 335 (335)
T ss_pred CHHHHHHHHHHHHhhC
Confidence 9999999999998764
No 25
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-48 Score=370.22 Aligned_cols=310 Identities=40% Similarity=0.653 Sum_probs=270.8
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
.++++|+.|++++++++.+.+++.+ +. ...+||+.|..+||+++++++++++++|++|+|+++++..++..+ +||
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd 95 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK 95 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence 3679999999999999999888875 32 236788888999999999999999999999999999999998866 799
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li 251 (422)
+|+++.|+|..|...++..|++++.++.+.++++|++.+++.+ .++++++++|||||||.+++.+++.++++.++++|
T Consensus 96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii 173 (337)
T PRK03967 96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV 173 (337)
T ss_pred eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence 9999999999998888999999999998777899999998875 47889999999999999999999999998899999
Q ss_pred EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH
Q 014594 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (422)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~ 331 (422)
+||+|.+|.. .+........+++++++||||.||++|+|+||+++++++++.+.+...+++.+.++|.++..+|++.++
T Consensus 174 ~De~y~~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 252 (337)
T PRK03967 174 LDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL 252 (337)
T ss_pred EECchhhhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence 9999999874 233344445678999999999999999999999999999999998888899999999999999988777
Q ss_pred HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh
Q 014594 332 LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH 410 (422)
Q Consensus 332 ~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~ 410 (422)
.. .++.+.++|+.+.+.|++. ..|++++|+|++++ +.+.|+++||.++++.. ...+++||+++.+++
T Consensus 253 ~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~-------~~~~l~~~gi~v~~~~~-~~~~~~Ri~~~~~~~ 320 (337)
T PRK03967 253 IEERIDYIIKERERVRRELGEY----AYPSDANFLLLKLD-------AYDYLLENGIVVRKLSG-RLEGHIRVTVGKREE 320 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhHH-------HHHHHHHCCEEEEeCCC-CCCCeEEEecCCHHH
Confidence 66 6667778888999999875 34789999999873 67888899999998753 346799999999888
Q ss_pred HHHHHHHHhhh
Q 014594 411 TDALMECLMHL 421 (422)
Q Consensus 411 ~~~l~~al~~l 421 (422)
+++|.++|+++
T Consensus 321 ~~~l~~~l~~~ 331 (337)
T PRK03967 321 NDEFIKALKEI 331 (337)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 26
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=6.6e-48 Score=378.73 Aligned_cols=327 Identities=18% Similarity=0.247 Sum_probs=268.8
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~-~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~ 161 (422)
.+.++++|+.|++++++++.+.+++.+. . ....|++ .|..+||+++++++ | ++++ +|++|+|+++++.+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~ 107 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH 107 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHH
Confidence 4567899999999999999999888762 2 2356855 58999999999987 3 6787 69999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++++++++||+|+++.|+|..|...++..|++++.++.+ .++.+|++++++.+. .++|+|++|+||||||.+++.++
T Consensus 108 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~s~~~ 186 (388)
T PRK07366 108 LPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPLSF 186 (388)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccCCHHH
Confidence 999999999999999999999999999999999999964 346789999988775 57999999999999999999999
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc--h--hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES--R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~--~--~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~ 310 (422)
+++|++. +++||+||+|.+|.+++. . ....+ ..+++++++||||.||++|+|+||+++++++++.+.+...
T Consensus 187 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~ 266 (388)
T PRK07366 187 FQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKA 266 (388)
T ss_pred HHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHh
Confidence 9998764 899999999999976432 1 22222 2357899999999999999999999999999999988776
Q ss_pred CCCCc--HHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC--CCHHHHHHHHH-
Q 014594 311 PYNVS--VAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDLA- 383 (422)
Q Consensus 311 ~~~~~--~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--~~~~~~~~~L~- 383 (422)
.++.+ ...+.++.++|. +.+|++ .++.++++++.+.+.|+++++....|++|+|+|+++++. .++.++++.|.
T Consensus 267 ~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~ 346 (388)
T PRK07366 267 VVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVA 346 (388)
T ss_pred hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHH
Confidence 64432 333444555554 467888 899999999999999998875335688999999999854 25778887775
Q ss_pred hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
++||.++++..++ ..+|+||+++.+ .+++.+++++|+
T Consensus 347 ~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl~ 385 (388)
T PRK07366 347 QTGVAASPGSGFGKSGEGYVRFALVHD--PDILEEAVERIA 385 (388)
T ss_pred hCCEEEeCchHhCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 7899999987643 358999999864 477999888863
No 27
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-47 Score=376.84 Aligned_cols=325 Identities=20% Similarity=0.335 Sum_probs=272.6
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCcchHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~~~~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~ 161 (422)
++.++++|+.|++++++++.+.+++.+ + ....+||+.|..+||+++++++ | ++++ +|++|+|+++++..
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 456799999999999999998888865 2 1235688788999999999996 4 5566 79999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++.+++++||.|+++.|+|+.|...++..|++++.++.+. ++.+|++++++.+. .++|+|+++|||||||.+++.++
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~ 200 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF 200 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence 9999999999999999999999999999999999999653 57789999999886 68999999999999999999999
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc--h-hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES--R-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~--~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~ 312 (422)
+++|++. +++||+||+|.++.+++. . .......+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus 201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~ 280 (410)
T PRK06290 201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN 280 (410)
T ss_pred HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence 8888753 999999999999875432 1 22222346789999999999999999999999999999998877654
Q ss_pred --CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC-------CCHHHHHHHH
Q 014594 313 --NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------MDAKKLKDDL 382 (422)
Q Consensus 313 --~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-------~~~~~~~~~L 382 (422)
+.+.+.|.++..+|++++|.+ .++.++++++.+.+.|+++++....|.+++|+|+++|++ .++.++++.|
T Consensus 281 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L 360 (410)
T PRK06290 281 DSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL 360 (410)
T ss_pred ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence 445689999999999888888 899999999999999999864333466778899999854 3688999999
Q ss_pred HhCC-cEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 383 AKMG-VMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 383 ~~~g-I~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
+++| |.+.++.. .++|+||+++ .+++++++.+++++
T Consensus 361 l~~~~v~~~p~~~--~~~~lRi~~~~~~~~~~~~~~~~~~l~~ 401 (410)
T PRK06290 361 IKEKLISTVPWDD--AGHFLRFSVTFEAKDEEEEDRILEEIKR 401 (410)
T ss_pred HHhCCEEEECCcc--ccCeEEEEEEcccccccchhHHHHHHHH
Confidence 8665 55567653 3479999998 77888999888875
No 28
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.1e-47 Score=378.07 Aligned_cols=323 Identities=21% Similarity=0.299 Sum_probs=272.3
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI 162 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~~ 162 (422)
.+.++|+|+.|++++++++.+.+++.+ +.....|+++ |..+||+++++++ | ++++ +|++|+|+++++..+
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 357889999999999999999998876 3444678765 7899999999986 6 5564 899999999999999
Q ss_pred HHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
+++++++ ||.|+++.|+|..|...++..|++++.+|.+ ++|.+|++++++.+. .++|++++||||||||.+++.
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~ 185 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL 185 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence 9999999 8999999999999999999999999999964 357899999998886 589999999999999999999
Q ss_pred HHHHHHHcC----CCeEEEccCCccccCCCc--hhhh------h--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 238 e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~------~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
+++++|++. +++||+||+|.++.+++. .... . ...+++++++||||.|+++|+|+||+++++++++
T Consensus 186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~ 265 (396)
T PRK09147 186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK 265 (396)
T ss_pred HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence 999998864 999999999999875431 1111 1 1357899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
.+.+... .++++.+.|.++.+++.+.+++. .++.++++++.+.+.|++. .....|++|+|+|++++ .+..++++
T Consensus 266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~ 342 (396)
T PRK09147 266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP--GDDTEFAR 342 (396)
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC--CCHHHHHH
Confidence 8887664 36788899999888888777888 8999999999999999875 22246889999999997 46788888
Q ss_pred HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|+ ++||.+.+|..+. ..+++||+++.++ +++.+++++|
T Consensus 343 ~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~--~~l~~~l~rl 390 (396)
T PRK09147 343 RLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPL--AECVEAAERI 390 (396)
T ss_pred HHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 876 7899999887532 2579999999753 6788888876
No 29
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=374.44 Aligned_cols=319 Identities=32% Similarity=0.536 Sum_probs=274.7
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~y~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~ 164 (422)
..++|+.|+|++++++.+++++.+. . ...+||+++..+||+++++++ ++++++|++|+|+++++..+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 4699999999999999999998762 1 236788888899999999998 5788999999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
+++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++.++++|+|++++||||||.+++.+++++|+
T Consensus 107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 186 (368)
T PRK03317 107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL 186 (368)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999987778899999999999766899999999999999999999999999
Q ss_pred cC-CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHH
Q 014594 245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA 321 (422)
Q Consensus 245 ~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a 321 (422)
+. ++++|+||+|.+|.+.+ ......+..+++++++||||.||++|+|+||+++++++++.+.....+|+.+++.|.+
T Consensus 187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a 266 (368)
T PRK03317 187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA 266 (368)
T ss_pred HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence 87 99999999999987543 2233334456899999999999999999999999999999998877789999999999
Q ss_pred HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE-EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594 322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF-ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG 399 (422)
Q Consensus 322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f-~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 399 (422)
+.++|++.++.. .+++++++++.+.+.|++++. .+.++.++| +|.+++ ++.++.+.|+++||.++++. .++
T Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~~---~~~ 339 (368)
T PRK03317 267 ARAALRHADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA---DRHAVWQGLLDRGVLIRDVG---IPG 339 (368)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC---CHHHHHHHHHHCCEEEEeCC---CCC
Confidence 999998754444 667788999999999998864 444445555 454553 67889999999999999764 368
Q ss_pred eEEEEecChhhHHHHHHHHhhh
Q 014594 400 YVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 400 ~iRis~~~~~~~~~l~~al~~l 421 (422)
++||+++.+++++++.++++++
T Consensus 340 ~iRi~~~~~~~~~~~~~~l~~~ 361 (368)
T PRK03317 340 WLRVTIGTPEENDAFLAALAEV 361 (368)
T ss_pred eEEEecCCHHHHHHHHHHHHHH
Confidence 9999999988889999998764
No 30
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-47 Score=376.81 Aligned_cols=326 Identities=20% Similarity=0.265 Sum_probs=276.1
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.++++|+.|++++++++.+.+++.+ +. ....| +..|..++|+++++++ ++++++|++|+|+++++..++
T Consensus 30 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 109 (387)
T PRK08960 30 AGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLAS 109 (387)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHH
Confidence 456789999999999999999999876 32 22457 5568899999999997 368899999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.+++++||+|++++|+|+.+...++..|++++.++.+. ++.+|++.+++.++ ++++++++++||||||.+++.++++
T Consensus 110 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~ 188 (387)
T PRK08960 110 SLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-ADTVGALVASPANPTGTLLSRDELA 188 (387)
T ss_pred HHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-ccceEEEEECCCCCCCcCcCHHHHH
Confidence 99999999999999999999999999999999988643 56899999999887 6788999999999999999999999
Q ss_pred HHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCc
Q 014594 242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS 315 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~ 315 (422)
+|++. |+++|+||+|.++.++..........+++++++||||.||++|+|+||+++++++++.+.+.... ++.+
T Consensus 189 ~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s 268 (387)
T PRK08960 189 ALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISAS 268 (387)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCC
Confidence 98753 99999999999987654333333445789999999999999999999999999999998877654 4678
Q ss_pred HHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594 316 VAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI 389 (422)
Q Consensus 316 ~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v 389 (422)
.+.|.++.++|.+. .++. .++.++++++.+.+.|++++... ..|.+++|+|+++++ ..++.++++.|+ ++||.+
T Consensus 269 ~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 269 TPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAF 348 (387)
T ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEE
Confidence 99999999999753 6677 88899999999999999887433 358889999999985 467888988876 789999
Q ss_pred EeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 390 RHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 390 ~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+|..++ .++|+||+++.+ .++|.++++++
T Consensus 349 ~pg~~f~~~~~~~~iRi~~~~~--~~~l~~al~~l 381 (387)
T PRK08960 349 TPGLDFGRHQAGQHVRFAYTQS--LPRLQEAVERI 381 (387)
T ss_pred cCchHhCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9987643 257999999973 58899999886
No 31
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.2e-47 Score=365.77 Aligned_cols=305 Identities=23% Similarity=0.342 Sum_probs=255.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~ 175 (422)
++|+|+.|+||++.. ....+||++.+.+||+++++++++++++|++|+|+++++..++. ++++|+ |++
T Consensus 17 ~~i~l~~Nenp~~~~----------~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~ 84 (332)
T PRK06425 17 RIIDFSANINDFMDI----------GDISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III 84 (332)
T ss_pred CEEEeccccCCCcCh----------hhcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence 579999999999522 12367999999999999999999999999999999999999997 567765 777
Q ss_pred cCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEE
Q 014594 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV 251 (422)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li 251 (422)
+.|+|..|...++..|++++.+|.+. ++.|.+.+++ .++|+|++||||||||.+++.+++++|++. ++++|
T Consensus 85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 159 (332)
T PRK06425 85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF 159 (332)
T ss_pred eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence 79999999999999999999999754 4566655542 478999999999999999999999998753 89999
Q ss_pred EccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594 252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (422)
Q Consensus 252 ~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~ 329 (422)
+||+|.+|.++. +........+++++++||||.||++|+|+||+++++++++.+.+...+++.+..++.++. .....
T Consensus 160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~-~~~~~ 238 (332)
T PRK06425 160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIR-SIDLD 238 (332)
T ss_pred EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHHH-HhhhH
Confidence 999999998643 233334456899999999999999999999999999999999988888887776654433 22334
Q ss_pred hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEEec
Q 014594 330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVG 406 (422)
Q Consensus 330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~iRis~~ 406 (422)
.+.+ .++.++++|+.+.+.|+++++....+++|+|+|++++ ++.++.+.|+++||.++++..++ .++|+||+++
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~ 315 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR 315 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC
Confidence 5555 7889999999999999998643334678999999986 68899999999999999987742 2579999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014594 407 KPEHTDALMECLMHL 421 (422)
Q Consensus 407 ~~~~~~~l~~al~~l 421 (422)
+++++++|.++|+++
T Consensus 316 ~~~~~~~l~~al~~~ 330 (332)
T PRK06425 316 RRSFNIKLVNALRNF 330 (332)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999864
No 32
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-47 Score=368.61 Aligned_cols=316 Identities=22% Similarity=0.271 Sum_probs=263.2
Q ss_pred CCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHH
Q 014594 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADE 157 (422)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~ 157 (422)
.+.....++..+|.++.++++|+.|+||+++++....+ ....+||++. .+||+++++++|++ +++|++|+|+++
T Consensus 8 hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e 82 (339)
T PRK06959 8 HGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQA 82 (339)
T ss_pred CCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHH
Confidence 34455666777787677899999999999887322211 1125699876 99999999999996 589999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
++..+.. ++++|| |+++.|+|..|...++..|++++.++.++ +. +. ..++++++||||||||.+++.
T Consensus 83 ~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 83 AIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCCCH
Confidence 9997766 578877 88999999999999999999999988533 22 22 356789999999999999999
Q ss_pred HHHHHHHc----CCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594 238 EDLLKILE----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (422)
Q Consensus 238 e~l~~i~~----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~ 313 (422)
+++.+|++ .+.++|+||+|.+|....+..... ..+++++++||||.||++|+|+||+++++++++.+.+...+|+
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~ 228 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT 228 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCcccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC
Confidence 99999875 288999999999987543333222 4578999999999999999999999999999999999988999
Q ss_pred CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014594 314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 392 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~ 392 (422)
++.++|.++.++|++.+|.+ .++.++++|+++.+.|+++++ .+. +.++|+|++++ ++.++.+.|.++||.|+.+
T Consensus 229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~~~~f~~~~~~---~~~~l~~~l~~~GI~vr~~ 303 (339)
T PRK06959 229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHGF-AVH-ATPLFSWTDDP---RAAALHAALARRGIWTRYF 303 (339)
T ss_pred CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-CcceEEEEeCC---CHHHHHHHHHhCCeEEEEC
Confidence 99999999999999988888 899999999999999999863 333 46799999985 5788999999999999976
Q ss_pred CCCCCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014594 393 NNKELKGYVRVSV-GKPEHTDALMECLMHL 421 (422)
Q Consensus 393 ~~~~~~~~iRis~-~~~~~~~~l~~al~~l 421 (422)
. ..+++||++ ++++++++|.++|+.+
T Consensus 304 ~---~~~~lRisi~~~~~e~~~l~~al~~~ 330 (339)
T PRK06959 304 A---PPPSVRFGLPADEAEWQRLEDALAEC 330 (339)
T ss_pred C---CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 3 356999999 5778889999998764
No 33
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-47 Score=371.90 Aligned_cols=334 Identities=22% Similarity=0.336 Sum_probs=275.5
Q ss_pred HHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCC
Q 014594 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCG 154 (422)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G 154 (422)
.+.+....+.++++|+.|++++++++.+.+++.+. . ....|+++ |..+||+++++++ | ++++ +|++|+|
T Consensus 22 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G 101 (385)
T PRK09276 22 KKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIG 101 (385)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 34444445567899999999999999998888762 2 23578765 7899999999997 4 4566 5999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (422)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (422)
+++++..+++.++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+. .++++|+++|||||||
T Consensus 102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG 180 (385)
T PRK09276 102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-KKAKLMFINYPNNPTG 180 (385)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCCC
Confidence 9999999999999999999999999999999999999999999964 357789999999886 6899999999999999
Q ss_pred cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594 233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (422)
Q Consensus 233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~ 304 (422)
.+++.+++++|++. ++++|+||+|.+|.+++. .....+ ..+++++++||||.||++|+|+||+++++++++.
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~ 260 (385)
T PRK09276 181 AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAG 260 (385)
T ss_pred CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHH
Confidence 99999888888763 899999999999875431 111222 2467899999999999999999999999999999
Q ss_pred HHHhcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 305 LWRAKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 305 l~~~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
+.+.... .+.+.+.|.++..+|++ ..|++ +++.++++++.+.+.|++++.....|.+++|+|++++++.+..++.+
T Consensus 261 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 340 (385)
T PRK09276 261 LGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAEFAT 340 (385)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCCCCCHHHHHH
Confidence 8876654 34677889999999975 57777 88899999999999999986322345677889999987778899999
Q ss_pred HHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 381 DLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 381 ~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.|+ ++||.++++..+. .++++||+++.++ +++.+++++|+
T Consensus 341 ~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~ 383 (385)
T PRK09276 341 LLLDKAGVVVTPGNGFGEYGEGYFRIALTVPD--ERIEEAVERIK 383 (385)
T ss_pred HHHHhCCEEECCchhhCCCCCCeEEEEeCCCH--HHHHHHHHHHh
Confidence 887 6899999987633 3579999998653 68999998873
No 34
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=369.35 Aligned_cols=325 Identities=24% Similarity=0.367 Sum_probs=273.1
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++++|+.|++++++++.+.+++.+ . .....|+++ |..+||+++++++ ++++++|++|+|+++++.+++.+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS 108 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence 4579999999999988888775543 2 233668665 7789999999987 46889999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
++++||+|+++.|+|..|...++..|++++.++. ++++.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus 109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 9999999999999999999999999999999985 3567799999999886 689999999999999999999999988
Q ss_pred HcC----CCeEEEccCCccccCCCc--hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~--~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~ 314 (422)
++. +++||+||+|.+|.++.. ....+. ..+++++++||||.||++|+|+||+++++++++.+..... .++.
T Consensus 188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~ 267 (384)
T PRK06348 188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA 267 (384)
T ss_pred HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence 764 999999999999876432 222222 2578999999999999999999999999999998887664 4788
Q ss_pred cHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594 315 SVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI 389 (422)
Q Consensus 315 ~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v 389 (422)
+.+.|.++..+|.+ +.+++ .++.++++++.+.+.|++++.+.+. |.+++|+|++++. +.++.++++.|+ ++||.+
T Consensus 268 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v 347 (384)
T PRK06348 268 PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLV 347 (384)
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEE
Confidence 99999999999977 45677 8888999999999999987555544 5577889999974 578899999886 689999
Q ss_pred EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.+|..++ .++++||+++.+ .+++.+++++|+
T Consensus 348 ~pg~~f~~~~~~~iRi~~~~~--~~~l~~al~~l~ 380 (384)
T PRK06348 348 IPGKAFGESGEGYIRLACTVG--IEVLEEAFNRIE 380 (384)
T ss_pred cCchhhccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 9988743 358999999853 478999998873
No 35
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.6e-47 Score=373.50 Aligned_cols=327 Identities=24% Similarity=0.273 Sum_probs=271.4
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~-~~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~ 161 (422)
.+.++++|+.|.+++++++.+.+++.+. . ....|+ ..|..+||+++++++ | ++++ +|++|+|+++++..
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~ 109 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE 109 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence 3457899999988888788888887652 2 235784 568999999999997 4 5777 89999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++..++++||+|+++.|+|..|...++..|++++.++.+. ++.+|++++++.+. .++++|++||||||||.+++.++
T Consensus 110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~ 188 (389)
T PRK08068 110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF 188 (389)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence 9999999999999999999999999999999999999753 57789999999986 68999999999999999999999
Q ss_pred HHHHHcC----CCeEEEccCCccccCCC-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
+++|++. ++++|+||+|.++.+++ .. ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus 189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~ 268 (389)
T PRK08068 189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH 268 (389)
T ss_pred HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence 9998763 99999999999877543 21 2222335688999999999999999999999999999999887766
Q ss_pred CC--CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594 312 YN--VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG 386 (422)
Q Consensus 312 ~~--~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g 386 (422)
+. .++..|.++..++.+ .++++ .++.++++++.+.+.|+++++....|.+++|+|++++++.+++++.+.|+ ++|
T Consensus 269 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~g 348 (389)
T PRK08068 269 LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAH 348 (389)
T ss_pred ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 54 445577777777754 57777 89999999999999999987433345667889999987778899999998 479
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|.++++..++ .++++||+++.++ +++.+++++|+
T Consensus 349 i~v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l~ 384 (389)
T PRK08068 349 VAVAPGNGFGEHGEGYVRVGLLTDE--ERLREAVERIG 384 (389)
T ss_pred EEEecchHhCccCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence 9999987643 3679999998653 78999998863
No 36
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.1e-46 Score=375.46 Aligned_cols=326 Identities=21% Similarity=0.317 Sum_probs=267.5
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
++.++|+|+.|+++ +.+++++.+++.+ +. ....| |..|..+||+++|+++ ++++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 45789999999887 5567788887765 22 23568 6668999999999997 3689999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+.+++.++++|||+|+++.|+|+.|...++..|++++.++. +++|++|+++++++++ .++++++++|||||||.+++
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence 99999999999999999999999999999999999999985 3578999999999886 68999999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-HH----HHHH
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LS----IIEY 304 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~----~~~~ 304 (422)
.+++++|++. +++||+||+|.++.+++. .+..+....++++++||||.|+++|+|+||++++ ++ +++.
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~ 302 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV 302 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence 9999988764 999999999999876432 2223333356999999999999999999999983 32 3345
Q ss_pred HHHhcCCC----CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----
Q 014594 305 LWRAKQPY----NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS---- 371 (422)
Q Consensus 305 l~~~~~~~----~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~---- 371 (422)
+......+ +++.+.|.++.++|++ .+|++ .++.++++++.+.+.|++++... ..|++++|+|++++.
T Consensus 303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~ 382 (462)
T PLN02187 303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMD 382 (462)
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCC
Confidence 55555543 3478999999999974 46788 89999999999999999987543 257889999998752
Q ss_pred CC-CHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 GM-DAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~~-~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+. +..+++..+ .++||.+++|..++..+||||+++.++ +.|.+++++|
T Consensus 383 ~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~--e~l~~al~rL 432 (462)
T PLN02187 383 NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEA--HMLEDALERL 432 (462)
T ss_pred CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence 22 455666555 599999999988777899999999864 6688888876
No 37
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=370.89 Aligned_cols=325 Identities=16% Similarity=0.260 Sum_probs=270.9
Q ss_pred CCCeEEcCCCCCC-CCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHc----C--CCC-CCEEEeCCHHHHHHH
Q 014594 94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL 161 (422)
Q Consensus 94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~y~~-~~~~~lr~~la~~~----~--~~~-~~i~~~~G~~~al~~ 161 (422)
+.+.++|+.+++. +++++.+.+++.+ +. ...+|++ .|..+||+++++++ | +++ ++|++|+|+++++..
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 5678999998765 5677888877765 22 2256865 47899999998886 6 466 899999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-----CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
++++++++||+|+++.|+|..+...++..|++++.++.+ +++++|++++++.++ .++++|+++|||||||.+++
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence 999999999999999999999999999999999999864 368899999999987 57999999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCch---hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~ 308 (422)
.+++++|++. +++||+||+|.+|.+++.. ...+ ...+++++++||||.|+++|+|+||+++++++++.+...
T Consensus 197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~ 276 (405)
T PRK06207 197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL 276 (405)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence 9998888764 9999999999998764321 1111 246899999999999999999999999999999999877
Q ss_pred cCC--CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594 309 KQP--YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL 382 (422)
Q Consensus 309 ~~~--~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L 382 (422)
... .+.+.+.|.++..+|+++ +|++ ..+.++++++.+.+.|++++.+.+ .|++|+|+|+++++ ..++.++.+.|
T Consensus 277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l 356 (405)
T PRK06207 277 QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKIL 356 (405)
T ss_pred HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHH
Confidence 654 456778999999999864 6777 777888899999999988754554 46789999999985 45788999999
Q ss_pred H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+ ++||.+.+|..+ ..++++||+++.+ .++|.+++++|
T Consensus 357 ~~~~gV~v~pG~~F~~~~~~~~Ris~~~~--~~~l~~al~rl 396 (405)
T PRK06207 357 RLQAGVIVTPGTEFSPHTADSIRLNFSQD--HAAAVAAAERI 396 (405)
T ss_pred HHhcCEEEeCchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 7 789999998864 3468999999974 37788888876
No 38
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.7e-46 Score=368.95 Aligned_cols=325 Identities=22% Similarity=0.360 Sum_probs=273.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|.+++++++.+.+++.+ +.. ...|+++ |..+||+++++++ | ++++ +|++|+|+++++..++.
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~ 133 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATIL 133 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence 4689999999999989988888876 222 3678654 8999999999987 3 5676 79999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++.+++.+. .++|+|+++|||||||.+++.+++++|
T Consensus 134 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-~~~k~i~i~~p~NPtG~~~s~~~l~~l 212 (413)
T PLN00175 134 GLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-SKTRAILINTPHNPTGKMFTREELELI 212 (413)
T ss_pred HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-cCceEEEecCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999964 458899999999997 689999999999999999999998888
Q ss_pred HcC----CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~ 314 (422)
++. ++++|+||+|.++.+++.. ...+ ...+++|+++||||.|+++|+|+||+++++++++.+..... .+++
T Consensus 213 ~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~ 292 (413)
T PLN00175 213 ASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 292 (413)
T ss_pred HHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCC
Confidence 764 9999999999998764422 2222 23578999999999999999999999999999998887664 4788
Q ss_pred cHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CC-CHHHHHHHHH-hCCcEE
Q 014594 315 SVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GM-DAKKLKDDLA-KMGVMI 389 (422)
Q Consensus 315 ~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~-~~~~~~~~L~-~~gI~v 389 (422)
+.+.|.++.++|+++ .|++ .++.++++++.+.+.|++++.....|.+++|+|+++++ +. +..++++.|+ ++||.+
T Consensus 293 s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v 372 (413)
T PLN00175 293 ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAA 372 (413)
T ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEE
Confidence 999999999999875 6777 89999999999999999886333456778899999842 43 5788998887 679999
Q ss_pred EeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 390 RHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 390 ~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.|+..+ ...+++||+++.+ .++|.+++++|+
T Consensus 373 ~pg~~F~~~~~~~~~~iRls~~~~--~e~l~~~~~rL~ 408 (413)
T PLN00175 373 IPPSVFYLNPEDGKNLVRFAFCKD--EETLRAAVERMK 408 (413)
T ss_pred eCchHhCCCCCCCCCEEEEEEcCC--HHHHHHHHHHHH
Confidence 998753 2357999999964 477999988863
No 39
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.8e-47 Score=372.05 Aligned_cols=323 Identities=22% Similarity=0.333 Sum_probs=271.2
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc--------CCCCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS--------GLESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~--------~~~~~-~i~~~~G~~~al~~ 161 (422)
.+.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++++++ +++++ +|++|+|+++++..
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 346789999999999999999999886 3344678665 7899999999997 36674 89999999999999
Q ss_pred HHHHhcCCCCE--EEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
++++++++||. |+++.|+|..|...++..|++++.++.+ +++.+|++++++.+. .++|+|+++|||||||.+++.
T Consensus 106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~ 184 (393)
T TIGR03538 106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL 184 (393)
T ss_pred HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence 99999999986 9999999999999999999999999963 457899999999886 589999999999999999999
Q ss_pred HHHHHHHcC----CCeEEEccCCccccCCC--ch---hhh---h--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 238 EDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 238 e~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
+++++|++. +++||+||+|.++.+++ .. ... . ...+++++++||||.|+++|+|+||+++++++++
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence 999988764 99999999999987542 11 111 1 1357899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
.+.+... .++++.+.|.++.+.+.+.++++ .++.++++++.+.+.|+++ .....|++|+|+|+++| .+..++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~ 341 (393)
T TIGR03538 265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP--GDDEAFAR 341 (393)
T ss_pred HHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC--CCHHHHHH
Confidence 8887665 35778899999888898778888 8899999999999999875 11246889999999997 46788998
Q ss_pred HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|. ++||.+.+|..+. ..+++||+++.. .+++.+++++|
T Consensus 342 ~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~--~~~l~~~l~~l 389 (393)
T TIGR03538 342 ALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAP--LEECVEAAERI 389 (393)
T ss_pred HHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 886 6899999887632 257999999864 36788888876
No 40
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.4e-46 Score=362.37 Aligned_cols=322 Identities=43% Similarity=0.732 Sum_probs=282.0
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~ 172 (422)
+.++|+|+.|+++++++|.+++++.+. .....|+++...++|+++++++++++++|++|+|+++++..++.+++++||+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~ 97 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDA 97 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 467999999999999999999999874 3336788776799999999999998899999999999999999999999999
Q ss_pred EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCe
Q 014594 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL 249 (422)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~ 249 (422)
|+++.|+|+.+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.+++.+++.++++. +++
T Consensus 98 v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ 176 (346)
T TIGR01141 98 VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDAL 176 (346)
T ss_pred EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcE
Confidence 9999999999988888999999999987777899999999875 689999999999999999999999999986 899
Q ss_pred EEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (422)
Q Consensus 250 li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~ 329 (422)
+|+||+|.++.............+++++++|+||.||++|+|+||+++++++++++.....+++.+.+.|.++.+++++.
T Consensus 177 ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (346)
T TIGR01141 177 VVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDD 256 (346)
T ss_pred EEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCH
Confidence 99999999877543333334445678999999999999999999999999999999888778899999999999999887
Q ss_pred hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC
Q 014594 330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK 407 (422)
Q Consensus 330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~ 407 (422)
++.+ .+++++++++.+.+.|++++++.+.|..++|+|++++. +++++.+.|.++||.+.++..+ ..++++||++++
T Consensus 257 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~~ 334 (346)
T TIGR01141 257 DFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVGT 334 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecCC
Confidence 7777 88999999999999999885556677789999999974 7889999999999999998763 237899999998
Q ss_pred hhhHHHHHHHH
Q 014594 408 PEHTDALMECL 418 (422)
Q Consensus 408 ~~~~~~l~~al 418 (422)
+++++++.++|
T Consensus 335 ~~~i~~~~~~l 345 (346)
T TIGR01141 335 REENDRFLAAL 345 (346)
T ss_pred HHHHHHHHHHh
Confidence 77777666655
No 41
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=370.61 Aligned_cols=327 Identities=18% Similarity=0.227 Sum_probs=269.7
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CCC--CCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~~--~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
.+.++|+|+.|+++ +++++.+.+++.+ +.. ...| |..|..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 45789999999998 8999999988876 322 2568 6678999999999997 4688999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+.+++++++++||.|+++.|+|+.|...++..|++++.++. ++++.+|+++++++++ .++++++++|||||||.+++
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999999999999985 3567899999999886 68899999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-H-HH------
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------ 301 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~-~~------ 301 (422)
.+++++|++. +++||+||+|.+|.+++. ....+...+++++++||||.|+++|+|+||++++ + .+
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~ 268 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI 268 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence 9999998764 999999999999886432 2233445578999999999999999999999983 3 33
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----
Q 014594 302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS---- 371 (422)
Q Consensus 302 ~~~l~~~~~~-~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~---- 371 (422)
++.+.+.... ...+.+.|.++.++|++ .+|.+ .++.++++++.+.+.|++++... ..|.+|+|+|++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~ 348 (409)
T PLN00143 269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE 348 (409)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC
Confidence 3444444332 23478899999999975 36777 88899999999999999876443 247789999999973
Q ss_pred C-CCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 372 G-MDAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 372 ~-~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
+ .+..+++..+ .++||.+++|..++.++++||+++.+ .+++.+++++|+
T Consensus 349 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~--~~~l~~al~rl~ 399 (409)
T PLN00143 349 DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVE--QSSLEDGLGRLK 399 (409)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCC--HHHHHHHHHHHH
Confidence 2 2566776555 58999999998877789999999975 377999988863
No 42
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.1e-46 Score=379.80 Aligned_cols=352 Identities=21% Similarity=0.277 Sum_probs=270.7
Q ss_pred HHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHH
Q 014594 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD 141 (422)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~ 141 (422)
.++.+..+.++ ....+...+.+....+.++|+|+.|++ .+++|+++.+++.+ +.....|++. |..+||++++++
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~ 197 (517)
T PRK13355 119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY 197 (517)
T ss_pred hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence 45555555543 222233344555555678999999765 46668888888875 3344679766 799999999999
Q ss_pred c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHH
Q 014594 142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213 (422)
Q Consensus 142 ~------~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~ 213 (422)
+ ++++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|++++.++.+ .+|.+|++++++.
T Consensus 198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 277 (517)
T PRK13355 198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK 277 (517)
T ss_pred HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence 8 6789999999999999999999999999999999999999999999999999999853 4588999999999
Q ss_pred hhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhc
Q 014594 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
+. +++|+|+++|||||||.+++.+++++|++. +++||+||+|.+|.+++. .+........+++++||||.|+
T Consensus 278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~ 356 (517)
T PRK13355 278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM 356 (517)
T ss_pred cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence 86 789999999999999999999888888764 899999999999886532 2222222234677899999999
Q ss_pred cccccceeeec--CHH----HHHHHHHhcCC-CCCcHHHHHHHHHHccCC----hHHHHHHHHHHHHHHHHHHHccCCCC
Q 014594 287 LAGLRVGYGAF--PLS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP----IYLEVKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 287 ~~G~r~G~i~~--~~~----~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
++|+|+||+++ +++ +++.+...... ++.+.++|.++..+|.+. +++...+++.++|+++.+.|++++++
T Consensus 357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999995 444 34444433333 678899999999999753 23332234556789999999998555
Q ss_pred c-ccCCCceEEEEEeCCC----CCHHHHHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 356 N-PYPSYSNFILCEVTSG----MDAKKLKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 356 ~-~~p~~~~f~~~~~~~~----~~~~~~~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
. ..|.+++|+|++++.+ .+..+++.. |.++||.+++|..++ .++||||+++.. .++|.+++++|+
T Consensus 437 ~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~--~~~l~~a~~rl~ 509 (517)
T PRK13355 437 SAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPR--LEDLEDAMDRLA 509 (517)
T ss_pred ccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCC--HHHHHHHHHHHH
Confidence 5 4566778889898642 245555544 558999999988753 578999999754 377999988863
No 43
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.2e-46 Score=367.16 Aligned_cols=331 Identities=22% Similarity=0.231 Sum_probs=277.8
Q ss_pred HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHHH
Q 014594 88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG-LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~-~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~~~~ 163 (422)
++++..+.++++|+.+++.+.+++.+ +++.+ +. ....|+. .|..+||++++++++ +++++|++|+|+++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~ 97 (373)
T PRK07324 19 ATYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVL 97 (373)
T ss_pred CccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHH
Confidence 34555678899999999988887777 55543 22 2356744 589999999999984 78899999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.+++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++++++.+. +++|+|++++||||||.+++.++++
T Consensus 98 ~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~ 176 (373)
T PRK07324 98 YALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLE 176 (373)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999964 456789999999886 6899999999999999999977777
Q ss_pred HHHc---C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCc
Q 014594 242 KILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS 315 (422)
Q Consensus 242 ~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~ 315 (422)
+|++ . |+++|+||+|.++.+++.........+++|+++||||.||++|+|+||+++++++++.+.+.+.. ++.+
T Consensus 177 ~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~ 256 (373)
T PRK07324 177 EIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAG 256 (373)
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCC
Confidence 7765 3 99999999999987654333333346788999999999999999999999999999999888764 5678
Q ss_pred HHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014594 316 VAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH 391 (422)
Q Consensus 316 ~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~ 391 (422)
.+.|.++..+|++. .+++ .++.++++++.+.+.|++.+.+. +.|.+|+|+|+.++.+.+..+++++|+ ++||.+.|
T Consensus 257 ~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~p 336 (373)
T PRK07324 257 VFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVP 336 (373)
T ss_pred hHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEEC
Confidence 89999999999864 4566 88889999999999998876554 567788888988876678889999876 78999999
Q ss_pred CCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 392 YNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 392 ~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|..++.++++||+++.. .+.|.+++++|+
T Consensus 337 g~~F~~~~~iRis~~~~--~~~l~~~l~rl~ 365 (373)
T PRK07324 337 GNRFDLEGHVRIGYCCD--TETLKKGLKKLS 365 (373)
T ss_pred ccccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 98877789999999975 377999998863
No 44
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-46 Score=360.61 Aligned_cols=315 Identities=25% Similarity=0.357 Sum_probs=269.3
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
..+++||+.|+|++++++.+++++.+ +.....||++ |..++|+++++++++++++|++|+|+++++.++++ +++|
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~- 97 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR- 97 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence 46789999999999999999999886 3334678765 88999999999999999999999999999999998 4664
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li 251 (422)
.++++.|+|..+...++..|++++.++.+.++.+|++.+ . .++++++++|||||||.+++.+++.++++.+.++|
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI 172 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV 172 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence 577789999999988999999999999876688998855 3 57899999999999999999999999998888999
Q ss_pred EccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC-
Q 014594 252 LDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP- 329 (422)
Q Consensus 252 ~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~- 329 (422)
+||+|.+|..+.. .+.. ...+++++++||||.|+++|+|+||+++++++++.+......++.+++.+.++..++++.
T Consensus 173 vDe~y~~~~~~~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 251 (349)
T PRK07908 173 VDEAFADAVPGEPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRA 251 (349)
T ss_pred EECcchhhccCCcccccc-ccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc
Confidence 9999998764321 1111 245689999999999999999999999999999999888778889999888888888743
Q ss_pred -hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEE
Q 014594 330 -IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVS 404 (422)
Q Consensus 330 -~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~iRis 404 (422)
++++ .+++++++++++.+.|++++ +. ..|++++|+|+++++ .+.+.+.|+++||.++++..+. .+++|||+
T Consensus 252 ~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis 327 (349)
T PRK07908 252 VAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLA 327 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEE
Confidence 5666 88899999999999999885 44 345899999999973 6788888889999999987643 36899999
Q ss_pred ecChhhHHHHHHHHhhh
Q 014594 405 VGKPEHTDALMECLMHL 421 (422)
Q Consensus 405 ~~~~~~~~~l~~al~~l 421 (422)
++.++++++|.++++++
T Consensus 328 ~~~~~~~~~l~~al~~~ 344 (349)
T PRK07908 328 VRPRAEVPVLVQALAEI 344 (349)
T ss_pred eCCCccHHHHHHHHHHH
Confidence 99988999999999875
No 45
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-46 Score=362.30 Aligned_cols=319 Identities=34% Similarity=0.590 Sum_probs=276.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
.++|+|+.|++++++++.+.+++.+. .....||+.|..++|+++++++++++++|++|+|+++++..++..++++||+|
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V 101 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV 101 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 35799999999999999999998763 33366888899999999999999999999999999999999999999999999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeE
Q 014594 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV 250 (422)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~l 250 (422)
+++.|+|..|...++..|++++.++.+.++++|++.+++.++ .++++++++|||||||.+++.+++.++++. ++++
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i 180 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV 180 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence 999999999988888899999999986567899999999997 689999999999999999999999999985 8999
Q ss_pred EEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594 251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (422)
Q Consensus 251 i~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~ 327 (422)
|+||+|.+|.+++. ........+++++++||||.||++|+|+||+++++++++.+.+....++.+.+.|.++.++|.
T Consensus 181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA 260 (352)
T ss_pred EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence 99999999876442 223344567899999999999999999999999999999999887789999999999999987
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 328 NP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 328 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
.. .+.+..+++.++++.+.+.|++.++ .+.+.+|+|+|++++ .+..++.+.|.++||.++++. .+++||+++
T Consensus 261 ~~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~~g~~i~i~l~--~~~~~~~~~l~~~gI~v~~~~----~~~iRi~~~ 333 (352)
T PRK03321 261 AEDELLERVDAVVAERDRVRAALRAAGW-TVPPSQANFVWLPLG--ERTADFAAAAAEAGVVVRPFA----GEGVRVTIG 333 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCEEEEeCC--CCHHHHHHHHHHCCEEEEccC----CCcEEEeeC
Confidence 64 4444555666777889999998764 445667899999985 367889999999999999853 357999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014594 407 KPEHTDALMECLMHL 421 (422)
Q Consensus 407 ~~~~~~~l~~al~~l 421 (422)
..++++++.++++++
T Consensus 334 ~~~~~~~~~~al~~~ 348 (352)
T PRK03321 334 APEENDAFLRAARAW 348 (352)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999864
No 46
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=3.8e-46 Score=361.14 Aligned_cols=323 Identities=24% Similarity=0.372 Sum_probs=270.5
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHHHhc
Q 014594 97 IVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~~l~ 167 (422)
+++|+.+.+++++++++.+++.+. .....|+++ |..+||+++++++ | ++++ +|++|+|+++++..++.+++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence 589999999999899999998863 344678776 7899999999986 5 4676 99999999999999999999
Q ss_pred CCC---CEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 168 ~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++| |+|+++.|+|..|...++..|++++.++.+ +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence 887 699999999999999999999999999974 457789999999987 58999999999999999999888888
Q ss_pred HHcC----CCeEEEccCCccccCCCchhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC--Cc
Q 014594 243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VS 315 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~ 315 (422)
|++. ++++|+||+|.++.++....... ...+++++++||||.+|++|+|+||+++++++++.+......++ .+
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP 240 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence 8654 99999999999876543222111 13578999999999999999999999999999998887765543 45
Q ss_pred HHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594 316 VAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 316 ~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 394 (422)
.+.|.++.+++.+.+|++ .++.++++++.+.+.|++.+.....|.+++|+|+++|++.++.++++.|.++||.++++..
T Consensus 241 ~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~ 320 (350)
T TIGR03537 241 DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN 320 (350)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence 568888888888888888 8899999999999999988643344566788999998767889999999999999999876
Q ss_pred CC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 395 KE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 395 ~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
++ .++++||+++.. .+++.+++++++
T Consensus 321 f~~~~~~~~Ri~~~~~--~~~~~~~l~~~~ 348 (350)
T TIGR03537 321 FGSGEEGYVRVALVPT--LEECEEALRLWE 348 (350)
T ss_pred hCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 43 368999999743 367888888764
No 47
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=4.7e-46 Score=365.08 Aligned_cols=327 Identities=23% Similarity=0.344 Sum_probs=272.7
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----GL--ESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~ 161 (422)
.+.++++|+.|++++++++.+.+++.+. . ...+|+++ |..+||+++++++ |+ +++ +|++|+|+++++..
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~ 106 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH 106 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence 3467899999999999899888887752 2 23678765 7899999999986 33 455 69999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+++.++++||.|+++.|+|+.+...++..|++++.++.+ +++.+|++++++.+. .++++++++|||||||.+++.++
T Consensus 107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~~ 185 (383)
T TIGR03540 107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKF 185 (383)
T ss_pred HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHHH
Confidence 999999999999999999999999999999999999964 356789999999886 68999999999999999999988
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc-hh--hhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES-RM--EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
+++|++. ++++|+||+|.++.+.+. .. .... ..+++++++||||.||++|+|+||+++++++++.+......
T Consensus 186 ~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~ 265 (383)
T TIGR03540 186 FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTN 265 (383)
T ss_pred HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHh
Confidence 8888764 899999999998875431 11 1222 24678999999999999999999999999999988876553
Q ss_pred --CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594 312 --YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG 386 (422)
Q Consensus 312 --~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g 386 (422)
.+.+.+.|.++..+|++ .+|++ .++.++++++.+.+.|+++++....|.+++|+|++++++.+..++++.|+ ++|
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~g 345 (383)
T TIGR03540 266 VDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETG 345 (383)
T ss_pred cccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCC
Confidence 46677889999999987 47887 88999999999999999986333345677889999987778899999876 789
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|.++++..+. .++++||+++.++ +++.+++++|+
T Consensus 346 i~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~ 381 (383)
T TIGR03540 346 VVVTPGVGFGEYGEGYIRISLTVPD--ERLEEAVARIK 381 (383)
T ss_pred EEEecchhhCccCCCeEEEEecCCH--HHHHHHHHHHh
Confidence 9999987643 3579999998653 68999998874
No 48
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=7.9e-46 Score=366.97 Aligned_cols=326 Identities=22% Similarity=0.335 Sum_probs=268.8
Q ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHH
Q 014594 94 PEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELI 159 (422)
Q Consensus 94 ~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al 159 (422)
+.++|+|+.|++. +++++++.+++.+ +. ....|+.. |..++|+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 5689999999884 7788899888876 32 22578654 8999999999997 35789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
.++++.++++||+|+++.|+|+.|...+...|++++.++. +++|.+|++.+++.++ .++++++++|||||||.+++.
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999874 4568899999999887 689999999999999999998
Q ss_pred HHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec--CHHHHH-----
Q 014594 238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIE----- 303 (422)
Q Consensus 238 e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~~~~----- 303 (422)
+++++|++. |+++|+||+|.+|.++.. ....+...+++++++||||.|++||||+||+++ ++.+++
T Consensus 210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~ 289 (430)
T PLN00145 210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV 289 (430)
T ss_pred HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence 888888653 999999999999886432 222334467899999999999999999999997 444433
Q ss_pred -HHHHhcCCC-CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----C
Q 014594 304 -YLWRAKQPY-NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----G 372 (422)
Q Consensus 304 -~l~~~~~~~-~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~----~ 372 (422)
.+....... +.+.+.|.++..+|++ .+|++ .++.++++++.+.+.|++++.+. ..|++++|+|++++. +
T Consensus 290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~ 369 (430)
T PLN00145 290 DSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSG 369 (430)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCC
Confidence 344443333 4678999999999986 36777 89999999999999999986554 358999999999863 2
Q ss_pred -CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 373 -MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 373 -~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.+..+++..|+ ++||.+.||..++.++|+||+++.+ .+.|.+++++|+
T Consensus 370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~--~~~l~~al~rl~ 419 (430)
T PLN00145 370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAID--PPSLEDGLERLK 419 (430)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence 25677876665 7899999998877889999999964 477999988863
No 49
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=6.8e-46 Score=364.47 Aligned_cols=330 Identities=23% Similarity=0.343 Sum_probs=275.2
Q ss_pred hCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHH
Q 014594 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELID 160 (422)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~ 160 (422)
....+.++++|+.+++++++++.+.+++.+ +. ....|++. |..+||+++++++ | +++++|++|+|+++++.
T Consensus 25 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~ 104 (388)
T PRK07337 25 LERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL 104 (388)
T ss_pred HHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence 333456789999999999888988888876 32 23568655 7899999999986 3 57899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
.++..++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.+. +++++|++++||||||.+++.+
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~ 183 (388)
T PRK07337 105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTSIAPD 183 (388)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcCcCHH
Confidence 9999999999999999999999988888899999999964 357899999999987 6899999999999999999999
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y 312 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~ 312 (422)
++++|++. ++++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+.... .
T Consensus 184 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~ 263 (388)
T PRK07337 184 ELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFI 263 (388)
T ss_pred HHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhcc
Confidence 98888763 89999999999887654322223335788999999999999999999999999999998877654 4
Q ss_pred CCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CCCHHHHHHHHH
Q 014594 313 NVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMDAKKLKDDLA 383 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~~~~~~~~~L~ 383 (422)
+.+.+.|.++..++.++ .+.. .++.++++++.+.+.|++++... ..|++|+|+|++++. ..++.++++.|.
T Consensus 264 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll 343 (388)
T PRK07337 264 CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAML 343 (388)
T ss_pred CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHH
Confidence 67889999999999754 3445 78889999999999999876433 468899999999974 247788887755
Q ss_pred -hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 384 -KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 384 -~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
++||.+.+|..++ .++++||+++.+ .++|.+++++|.
T Consensus 344 ~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~--~~~l~~~l~rl~ 384 (388)
T PRK07337 344 HDAGVVLVPGRDFGPHAPRDYIRLSYATS--MSRLEEAVARLG 384 (388)
T ss_pred HhCCEEEeCchhhCCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence 8899999987643 358999999974 478999998873
No 50
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-46 Score=365.38 Aligned_cols=327 Identities=25% Similarity=0.315 Sum_probs=268.3
Q ss_pred CCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHH
Q 014594 92 RKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELID 160 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~ 160 (422)
..+.++++|+.+.++.++++++.+++.+ +. ....|+++ |.++||+++++++ + ++++ +|++|+|+++++.
T Consensus 32 ~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~ 111 (394)
T PRK05942 32 EQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT 111 (394)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH
Confidence 3455689999987777666667666543 22 23678765 7899999999987 4 4677 5999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
.++.+++++||+|+++.|+|+.+...+...|++++.++.+ .+|.+|++++++.+. +++|+|+++|||||||.+++.+
T Consensus 112 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG~~~s~~ 190 (394)
T PRK05942 112 HLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTTATAPRE 190 (394)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCCCcCCHH
Confidence 9999999999999999999999988888899999999864 457799999999986 6899999999999999999998
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~ 310 (422)
++++|++. ++++|+||+|.+|.+++. ....+. ..+++++++||||.||++|+|+||+++++++++.+.....
T Consensus 191 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~ 270 (394)
T PRK05942 191 FFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKT 270 (394)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHh
Confidence 88888653 999999999999876432 222222 2456789999999999999999999999999999987765
Q ss_pred --CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hC
Q 014594 311 --PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KM 385 (422)
Q Consensus 311 --~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~ 385 (422)
.++.+.+.|.++..+|+. .++++ .+++++++++.+.+.|+++++....|.+++|+|++++.+.++.++...++ ++
T Consensus 271 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~ 350 (394)
T PRK05942 271 NLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKT 350 (394)
T ss_pred hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHC
Confidence 477888999999999975 46777 88999999999999999886433345667799999987677788887655 89
Q ss_pred CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 386 GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 386 gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
||.+.++..+ ...+++||+++.+ .++|.++++++
T Consensus 351 gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 386 (394)
T PRK05942 351 GVVVTPGNAFGEGGEGYVRISLIAD--CDRLGEALDRL 386 (394)
T ss_pred CEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9999998764 3368999999853 58899999886
No 51
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=8.9e-46 Score=365.91 Aligned_cols=326 Identities=19% Similarity=0.282 Sum_probs=272.0
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHcC------------CCCCCEEEe
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG 152 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~~------------~~~~~i~~~ 152 (422)
.+.++|+|+.|.++ +.+++.+.+++.+ +. ....|+++ |..+||++++++++ +++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 45688999999876 5678888888876 32 23679776 79999999999975 678999999
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
+|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.+ .++++|++++++.++ .++++|+++|||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP 189 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP 189 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999863 467999999999887 58999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec------
Q 014594 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF------ 297 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~------ 297 (422)
||.+++.+++++|++. |++||+||+|.+|.+++. ....+....++++++||||.||++|+|+||+++
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 9999999999888764 999999999999876432 222222334689999999999999999999997
Q ss_pred CHHHHHHHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCC
Q 014594 298 PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG 372 (422)
Q Consensus 298 ~~~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~ 372 (422)
++++++.+.+... .++++.+.|.++..+|.+ .+|++ .++.++++++.+.+.|+++..+. ..|++|+|+|++++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~ 349 (412)
T PTZ00433 270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLE 349 (412)
T ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechh
Confidence 2467777776654 368899999999999976 46777 88999999999999998864344 4577899999999741
Q ss_pred -----CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 -----MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 -----~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.++++.|+ ++||.++++..++..+++||+++.++ +.+.+++++|
T Consensus 350 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~--e~l~~al~~l 402 (412)
T PTZ00433 350 KFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV--EVLREAVERI 402 (412)
T ss_pred hcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 25788999987 68999999987767899999999763 6688888876
No 52
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=8.7e-46 Score=365.47 Aligned_cols=327 Identities=20% Similarity=0.277 Sum_probs=272.9
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~a 158 (422)
.+.++|+|+.|++. +++++.+++++.+ +. ....| |..|..++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 45789999999997 8889999998876 32 23578 55689999999999973 678999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+..++.+++++||+|++++|+|+.|...++..|++++.++.. +++.+|++.+++.++ .++++++++|||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence 999999999999999999999999988888899999999863 467899999999886 67899999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC--------HHH
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI 301 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--------~~~ 301 (422)
.+++++|++. ++++|+||+|.+|.+++. ....+...+++++++||||.|+++|+|+||++++ +++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~ 267 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI 267 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence 9999888764 999999999999886542 2223344578999999999999999999999983 578
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC---
Q 014594 302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--- 372 (422)
Q Consensus 302 ~~~l~~~~~~-~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~--- 372 (422)
++.+.+.... .+++.+.|.++..+|++ ..|++ .++.++++++.+.+.|++++... ..|++|+|+|++++..
T Consensus 268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~ 347 (409)
T PLN02656 268 VERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE 347 (409)
T ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC
Confidence 8888766554 35788999999999975 35777 88899999999999999876433 3578899999998621
Q ss_pred --CCHHHHH-HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 373 --MDAKKLK-DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 373 --~~~~~~~-~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.+..++. +.|.++||.+.+|..++.++++||+++.+ .++|.+++++|+
T Consensus 348 ~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~--~e~l~eal~rl~ 398 (409)
T PLN02656 348 DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAAD--PSSLEEALGRIK 398 (409)
T ss_pred CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence 2344554 55668999999998877789999999974 478999998873
No 53
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.2e-45 Score=364.12 Aligned_cols=326 Identities=21% Similarity=0.307 Sum_probs=265.9
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~ 161 (422)
.+.++|+|+.|++++++++.+.+++.+. . ....|+++ |..+||+++++++ | ++++ +|++|+|+++++..
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 107 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFAN 107 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 4467899999999998888888887752 2 23678665 7899999999987 4 4676 89999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++..++++||+|++++|+|..|...++..|++++.++.+.+ +..++++..+... ++++++++++||||||.+++.++
T Consensus 108 ~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~ 186 (405)
T PRK09148 108 MAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDF 186 (405)
T ss_pred HHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999999999888999999999996433 3334444433332 57899999999999999999998
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCch---hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~- 310 (422)
+++|++. +++||+||+|.+|.++... ..... ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus 187 l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~ 266 (405)
T PRK09148 187 YKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSY 266 (405)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHH
Confidence 8888764 9999999999998764321 22222 2356789999999999999999999999999999987765
Q ss_pred -CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC---CCHHHHHHHHH-
Q 014594 311 -PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---MDAKKLKDDLA- 383 (422)
Q Consensus 311 -~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~---~~~~~~~~~L~- 383 (422)
.++.+.+.|.++..+|++ ..+++ .++.++++++.+.+.|+++++....|++|+|+|+++|+. .+..++.+.|.
T Consensus 267 ~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~ 346 (405)
T PRK09148 267 LDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVE 346 (405)
T ss_pred hccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHH
Confidence 467889999999999986 46777 889999999999999998875334578899999999853 24678888876
Q ss_pred hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++||.++++..++ .++|+||+++. +.+++.+++++|
T Consensus 347 ~~gV~v~pg~~f~~~~~~~~Ri~~~~--~~~~l~~al~~l 384 (405)
T PRK09148 347 KADVAVAPGVGFGEHGDGYVRIALVE--NEQRIRQAARNI 384 (405)
T ss_pred hCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 7899999987643 35899999984 358899998876
No 54
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.5e-46 Score=371.07 Aligned_cols=321 Identities=19% Similarity=0.232 Sum_probs=264.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHcC--C-CCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSG--L-ESDHILVGCGADELIDLIMRCVLDP 169 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~~--~-~~~~i~~~~G~~~al~~~~~~l~~~ 169 (422)
..+++|+.+.++.+++|.+.+++.+. .....|+++ |..+||++++++++ + .+++|++|+|+++++..+++++++|
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p 164 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP 164 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence 35689999987777767777877763 223568765 67899999999986 3 3569999999999999999999999
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHc---
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE--- 245 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~--- 245 (422)
||.|++++|+|..|...++..|++++.++.+++ ++|++.++++++ .++|+++++ |||||||.+++.+++++|++
T Consensus 165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998544 699999999997 589999998 99999999999996666654
Q ss_pred -C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHH
Q 014594 246 -M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA 321 (422)
Q Consensus 246 -~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a 321 (422)
. +++||+||+|.+|.+.+.........+++++++||||.|+ +|+|+||+++++++++.+...... +++|.+.|.+
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a 321 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDL 321 (431)
T ss_pred hcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHH
Confidence 3 8899999999998754321111113578999999999999 999999999999999998765544 5689999999
Q ss_pred HHHHccCChH---HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC
Q 014594 322 ACAALQNPIY---LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL 397 (422)
Q Consensus 322 a~~~L~~~~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~ 397 (422)
+..+|+++++ ++ .++.++++++.+.+.|++++.....|++|+|+|++++. +.+++.+.|.++||.+.+|..+..
T Consensus 322 ~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~ 399 (431)
T PRK15481 322 VYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGV 399 (431)
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCcccc
Confidence 9999998754 56 88899999999999999886433478999999999974 578899999999999999876432
Q ss_pred ---CCeEEEEecChhhHHHHHHHHhhh
Q 014594 398 ---KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 398 ---~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+++||+++...+ +++.+++++|
T Consensus 400 ~~~~~~iRis~~~~~~-~~i~~~~~~l 425 (431)
T PRK15481 400 SAPSHGLRITLSTLND-AEINRLAADL 425 (431)
T ss_pred CCCCCeEEEEcCCCCh-HHHHHHHHHH
Confidence 4689999997542 5677776665
No 55
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-46 Score=361.47 Aligned_cols=323 Identities=21% Similarity=0.294 Sum_probs=263.4
Q ss_pred HHHHHhCCC-CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCH
Q 014594 85 VLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGA 155 (422)
Q Consensus 85 ~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~ 155 (422)
.+..++..+ +.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++++++ | +++++|++|+|+
T Consensus 13 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~ 92 (374)
T PRK05839 13 ELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGT 92 (374)
T ss_pred HHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 344444444 55899999999999999999888876 3344678766 7889999998775 5 689999999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 156 DELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 156 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
++++..++..++ ++||.|+++.|+|..|...++..|++++.++.+ +++.+|++..+ + .++|+++++||||||
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NPT 168 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNPT 168 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCCc
Confidence 999999988764 478999999999999999999999999999974 34666654432 3 468999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch---hhh-----hhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEW-----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~-----~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
|.+++.+++++|++. |+++|+||+|.+|.++... ... ...++++++++||||.|+++|+|+||+++++
T Consensus 169 G~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~ 248 (374)
T PRK05839 169 GRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA 248 (374)
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH
Confidence 999999999999864 9999999999998643322 111 1234799999999999999999999999999
Q ss_pred HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHH
Q 014594 300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK 376 (422)
Q Consensus 300 ~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~ 376 (422)
++++++.+... .++.+.+.|.++..++.+.++++ .++.++++++.+.+.|.. . .|++|+|+|++++ +..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~-~p~gg~fi~~~~~---~~~ 320 (374)
T PRK05839 249 SILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILGI----T-IPPATFYVWLPVD---NDE 320 (374)
T ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcCC----C-CCCeeEEEEEeCC---ChH
Confidence 99999887654 36778889999988888888888 888999999988887632 2 6789999999996 467
Q ss_pred HHHHHHH-hCCcEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 377 KLKDDLA-KMGVMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 377 ~~~~~L~-~~gI~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++++.|. ++||.++++..++ .++|+||+++.+ .+++.+++++|
T Consensus 321 ~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~l~~l 368 (374)
T PRK05839 321 EFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYD--TPKLEKALEII 368 (374)
T ss_pred HHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 8888887 5999999976533 258999999864 47788888876
No 56
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.5e-46 Score=372.51 Aligned_cols=326 Identities=19% Similarity=0.273 Sum_probs=262.5
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCEE
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL 150 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~ 150 (422)
+..+|+|+.+||++.. +.+.+.+... . ....|+++ |..+||++++++++ +++++|+
T Consensus 37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii 115 (468)
T PLN02450 37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV 115 (468)
T ss_pred CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence 4568999999999976 6666666542 1 12448776 78899999999973 5889999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecC--CCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 151 ~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
+|+|+++++..++.++++|||.|+++.|+|+.|...+. ..|++++.++. ++++.+|++++++++.+ .++|+|
T Consensus 116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v 195 (468)
T PLN02450 116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV 195 (468)
T ss_pred EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999987777 48999999996 46788899999998753 378999
Q ss_pred EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-c---hhhhhh--------cCCcEEEEccChhhhc
Q 014594 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S---RMEWVK--------KHDNLIVLRTFSKRAG 286 (422)
Q Consensus 223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~-~---~~~~~~--------~~~~~i~~~S~SK~~~ 286 (422)
++||||||||.+++.+++++|++. +++||+||+|.++.+.+ . ...... ..+++++++||||.|+
T Consensus 196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 999999999999999999998874 99999999999876543 1 122211 3578999999999999
Q ss_pred cccccceeeecCHH-HHHHHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccCC
Q 014594 287 LAGLRVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYPS 360 (422)
Q Consensus 287 ~~G~r~G~i~~~~~-~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~ 360 (422)
++|+|+||++++++ +++.+.+....+.++.+.|.++..+|++++ +++ .+++++++++.+.+.|++++.....+.
T Consensus 276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~ 355 (468)
T PLN02450 276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSN 355 (468)
T ss_pred CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 99999999999754 566666654445679999999999999874 556 888999999999999999864334566
Q ss_pred CceEEEEEeCCCCC------HHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 361 YSNFILCEVTSGMD------AKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~~~~~~~~~------~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+|+|+|++++...+ ..++.+.|. ++||.+.||..+. .++|+||+|+..++ +.+.+++++|
T Consensus 356 ~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~-~~l~~~l~ri 424 (468)
T PLN02450 356 AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE-ETLDLAMKRL 424 (468)
T ss_pred ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence 78899999974322 245666766 6899999998743 46899999996332 6688887776
No 57
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-45 Score=360.49 Aligned_cols=325 Identities=21% Similarity=0.339 Sum_probs=268.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~----~~~--~-~~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++ |++ + ++|++|+|+++++..+++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS 108 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence 46899999999999999998888762 2 22568 4558899999999874 653 3 689999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++.+++.++ .++|+|+++|||||||.+++.+++++|
T Consensus 109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i 187 (384)
T PRK12414 109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL 187 (384)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999975 467899999999997 689999999999999999999999888
Q ss_pred HcC----CCeEEEccCCccccCCCch---hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~ 313 (422)
++. ++++|+||+|.++.+++.. .... ...+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~ 267 (384)
T PRK12414 188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS 267 (384)
T ss_pred HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence 753 9999999999998764321 1111 22468999999999999999999999999999999887764 578
Q ss_pred CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHH-HHHHhCCcEE
Q 014594 314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLK-DDLAKMGVMI 389 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~-~~L~~~gI~v 389 (422)
.+.+.|.++..+|+++.+.. .++.++++++.+.+.|+++++....+.+++|+|+++++ ..+..+++ +.|.++||.+
T Consensus 268 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v 347 (384)
T PRK12414 268 ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVAT 347 (384)
T ss_pred CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEE
Confidence 89999999999998876555 78889999999999999986333345677889988864 23455666 4556899999
Q ss_pred EeCCCCC----CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 390 RHYNNKE----LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 390 ~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.++..+. ..+++||+++.+ .+++.+++++|.
T Consensus 348 ~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~~~rl~ 382 (384)
T PRK12414 348 IPLSAFYTDGTDTGLIRLSFSKD--DATLVEGARRLC 382 (384)
T ss_pred ecchhhcCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 9987632 257999999975 488999999874
No 58
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.4e-45 Score=361.18 Aligned_cols=324 Identities=24% Similarity=0.390 Sum_probs=271.0
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCC-CcchHHHHHHHHHHcC------CCCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~-~~~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++++.+.+++.+ +. ....|+ ..|..+||++++++++ ++++ +|++|+|+++++.++++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 4579999999999988888887765 22 225685 4689999999999973 4555 79999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++++||+|++++|+|+.|...++..|++++.++.+ +++++|++++++++. ++++++++++||||||.+++.+++++
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~ 178 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE 178 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence 999999999999999999999999999999999853 468999999999987 68999999999999999999998888
Q ss_pred HHcC----CCeEEEccCCccccCCCch--hhh-hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594 243 ILEM----PILVVLDEAYTEFSGLESR--MEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~--~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~ 313 (422)
|++. ++++|+||+|.+|.+++.. ... .+..+++++++||||.|+++|+|+||+++++++++.+..... .++
T Consensus 179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~ 258 (378)
T PRK07682 179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC 258 (378)
T ss_pred HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence 8764 9999999999999865432 122 223478999999999999999999999999999999876654 356
Q ss_pred CcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594 314 VSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI 389 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v 389 (422)
.+.+.|.++..+|++. .+++ +++.++++++.+.+.|++++.....|++++|+|++++. +.++.++.+.|+ ++||.+
T Consensus 259 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 338 (378)
T PRK07682 259 APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAV 338 (378)
T ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 8899999999999874 5666 88899999999999999986433457788899998853 568889998876 789999
Q ss_pred EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++|..++ .++++||+++.+ .+++.+++++|
T Consensus 339 ~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 370 (378)
T PRK07682 339 VPGSVFGESGEGFIRCSYATS--LEQLQEAMKRM 370 (378)
T ss_pred cCchhhCcCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 9987643 368999999974 36788888776
No 59
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.6e-45 Score=361.78 Aligned_cols=326 Identities=19% Similarity=0.271 Sum_probs=270.4
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHcC-----CCCCCEEEeCCHHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI 159 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~~~-----~~~~~i~~~~G~~~al 159 (422)
++.++++|+.|+++ +++++.+.+++.+. .. ...| |..|..+||++++++++ +++++|++|+|+++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 34678999999874 78889999888762 22 2457 66789999999999986 6889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
.+++.+++++||+|+++.|+|..|...++..|++++.++.+ +++++|++.+++.++ .++++++++|||||||.+++.
T Consensus 109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~ 187 (401)
T TIGR01264 109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR 187 (401)
T ss_pred HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999998853 457899999999886 578999999999999999999
Q ss_pred HHHHHHHcC----CCeEEEccCCccccCCC-ch--hhhhhcCCcEEEEccChhhhccccccceeeecCH------HHHHH
Q 014594 238 EDLLKILEM----PILVVLDEAYTEFSGLE-SR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY 304 (422)
Q Consensus 238 e~l~~i~~~----~~~li~Deay~~~~~~~-~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~------~~~~~ 304 (422)
+++++|++. ++++|+||+|.+|.+++ .. ........++|+++||||.|+++|+|+||+++++ ++++.
T Consensus 188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~ 267 (401)
T TIGR01264 188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG 267 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence 999888764 99999999999987643 21 2222223358999999999999999999999874 45666
Q ss_pred HHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CCC
Q 014594 305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMD 374 (422)
Q Consensus 305 l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~~ 374 (422)
+..... .++++.+.|.++..+|.+ .+|++ .++.++++++.+.+.|++++++. ..|++|+|+|++++. ..+
T Consensus 268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ 347 (401)
T TIGR01264 268 LVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKN 347 (401)
T ss_pred HHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCC
Confidence 655544 467889999999999976 47777 88999999999999999885454 468899999999752 236
Q ss_pred HHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 375 AKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 375 ~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..++++.|+ ++||.++++..+..++++||+++..+ +.+.+++++|
T Consensus 348 ~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~rl 393 (401)
T TIGR01264 348 DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPV--VMMEEACSRI 393 (401)
T ss_pred HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 778888876 89999999887666899999999753 6688888776
No 60
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-46 Score=346.34 Aligned_cols=320 Identities=26% Similarity=0.374 Sum_probs=266.1
Q ss_pred cCCCCCCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHc----C---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 014594 100 IDANENPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD 168 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~~----~---~~~~~i~~~~G~~~al~~~~~~l~~ 168 (422)
|+.|.+++++|+-+.+++.++ .. .+.| ++.|.++|+++|++.+ | .+.++|++|.|+.+++..++..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 999999999999999999874 22 2455 6667777777777654 3 2456899999999999999999999
Q ss_pred CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--------CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
+||+|++.+|.|..|....+++|++++.++.. ++|.+|++.++.+++ ++||+|++|+||||||.++++++|
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL 194 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL 194 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence 99999999999999999999999999999843 578999999999998 799999999999999999999999
Q ss_pred HHHHcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594 241 LKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (422)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~- 311 (422)
++|+++ |+++|.||+|..+.+++. .....+++++++.++||+|.||+.|||+||+++++.++..+...++.
T Consensus 195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence 999885 999999999999887663 23445678999999999999999999999999999999998887765
Q ss_pred -CCCcHHHHHHHHHHccCC---------hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--------CC
Q 014594 312 -YNVSVAAEVAACAALQNP---------IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SG 372 (422)
Q Consensus 312 -~~~~~~~~~aa~~~L~~~---------~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~--------~~ 372 (422)
+.+++..|.|..+++..+ .+.. +.+.++++|+.|.+.|.+++.....|++++|+|++++ ++
T Consensus 275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~ 354 (420)
T KOG0257|consen 275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEE 354 (420)
T ss_pred ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchh
Confidence 677888888887777643 3455 8899999999999999999866678999999999987 11
Q ss_pred ----CCHHHHHHHHH-hCCcEEEeCCCCCCC-------CeEEEEecChhhHHHHHHHHhhhC
Q 014594 373 ----MDAKKLKDDLA-KMGVMIRHYNNKELK-------GYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 373 ----~~~~~~~~~L~-~~gI~v~~~~~~~~~-------~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
-+.-.+...|. +.|+.+.|.+.+... +++|+++...+ +.|..++++++
T Consensus 355 ~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~--~~L~~a~e~l~ 414 (420)
T KOG0257|consen 355 ILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKAD--ETLRKAIERLK 414 (420)
T ss_pred hccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhH--HHHHHHHHHHh
Confidence 13345667776 789999888775443 45666665543 66888887763
No 61
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-45 Score=359.79 Aligned_cols=334 Identities=19% Similarity=0.290 Sum_probs=269.3
Q ss_pred HHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCH
Q 014594 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGA 155 (422)
Q Consensus 87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~ 155 (422)
+.+....+.++++|+.+.++...++.+.+++.+ .. ....|++. |..+||+++++++ + ++++ +|++|+|+
T Consensus 25 ~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~ 104 (403)
T PRK08636 25 KMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGS 104 (403)
T ss_pred HHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCCh
Confidence 334444556789999998887767766666654 32 23678664 8999999999986 5 5666 79999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHH----HHHhhc--CCCeEEEEeCC
Q 014594 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLTSP 227 (422)
Q Consensus 156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l----~~~i~~--~~~~~i~l~~p 227 (422)
++++.+++++++++||.|++++|+|+.+...++..|++++.++. ++++++|++.+ ++++++ .+++++++|+|
T Consensus 105 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P 184 (403)
T PRK08636 105 KEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFP 184 (403)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999986 45688998754 555542 57899999999
Q ss_pred CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecCH
Q 014594 228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
|||||.+++.+++++|++. +++||+||+|.++.+++. .+..++. .+++++++||||.||++|+|+||+++++
T Consensus 185 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~ 264 (403)
T PRK08636 185 HNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK 264 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH
Confidence 9999999999999999864 999999999999876532 2222322 3567889999999999999999999999
Q ss_pred HHHHHHHHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC---
Q 014594 300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--- 372 (422)
Q Consensus 300 ~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--- 372 (422)
++++.+.+... .++.+.+.|.++..+++. .+|++ +++.++++++.+.+.|++.++....|.+|+|+|+++|+.
T Consensus 265 ~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~ 344 (403)
T PRK08636 265 KLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARH 344 (403)
T ss_pred HHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCC
Confidence 99999887665 366777888888888764 46777 888999999999999998764334678999999999853
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 373 MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 373 ~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.++.++.+.++ ++||.+.++..++ .++++||+++.+ .+++.+++++|+
T Consensus 345 ~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~~~rl~ 395 (403)
T PRK08636 345 LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIEN--ENRIRQAARNIK 395 (403)
T ss_pred CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 34688887765 7899999987643 358999999843 488999988863
No 62
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=9.8e-46 Score=370.49 Aligned_cols=328 Identities=21% Similarity=0.294 Sum_probs=258.1
Q ss_pred CCCeEEcCCCCCCC--CC-CHHHHHHHhc----------CCCCCCCCCc-chHHHHHHHHHHcC--------CCCCCEEE
Q 014594 94 PEDIVKIDANENPY--GP-PPEVREALGQ----------LKFPYIYPDP-ESRRLRAALAKDSG--------LESDHILV 151 (422)
Q Consensus 94 ~~~~i~l~~~~~~~--~~-~~~v~~al~~----------~~~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~~ 151 (422)
+..+|+|+.+||++ .. .+.+.+.... ......|++. |..+||+++|++++ +++++|++
T Consensus 45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi 124 (496)
T PLN02376 45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM 124 (496)
T ss_pred CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence 45689999999988 33 3334333221 1111345444 78999999999974 68999999
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCC--CCCCCCHHHHHHHhh-----cCCCeEEE
Q 014594 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF 223 (422)
Q Consensus 152 ~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~ 223 (422)
|+|++++++.++.++++|||.|+++.|+|+.|...++ ..|++++.++.+ +++++|++.+++++. ..++|+|+
T Consensus 125 t~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~ 204 (496)
T PLN02376 125 SGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI 204 (496)
T ss_pred ccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence 9999999999999999999999999999999988777 489999999973 568999999987642 14789999
Q ss_pred EeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-ch---hhhhhc-------CCcEEEEccChhhhccc
Q 014594 224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKK-------HDNLIVLRTFSKRAGLA 288 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~-------~~~~i~~~S~SK~~~~~ 288 (422)
++|||||||.+++.+++++|++. +++||+||+|.++.+.+ .. ...... .+++++++||||.||++
T Consensus 205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp 284 (496)
T PLN02376 205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP 284 (496)
T ss_pred EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence 99999999999999999998874 99999999999987543 11 112111 13567899999999999
Q ss_pred cccceeeecC-HHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 289 GLRVGYGAFP-LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 289 G~r~G~i~~~-~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
|+|+||++++ +.+.+.+......+.++.+.|.++..+|++++|++ .+++++++++.+.+.|++.+.....+.+|
T Consensus 285 GlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG 364 (496)
T PLN02376 285 GFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAG 364 (496)
T ss_pred cceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCce
Confidence 9999999995 56666665555556689999999999999877643 57788999999999999876433457788
Q ss_pred eEEEEEeCCCC-------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 363 NFILCEVTSGM-------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 363 ~f~~~~~~~~~-------~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
+|+|++++... +..++++.|. +.||.+.||..+ ..++|+||+|+..++ ++|.+++++|+
T Consensus 365 ~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~-~~l~~al~rl~ 433 (496)
T PLN02376 365 LFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD-DTLHVALGRIQ 433 (496)
T ss_pred EEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH-HHHHHHHHHHH
Confidence 99999997432 2357788777 569999999875 346899999996443 78999998863
No 63
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=6.8e-45 Score=349.17 Aligned_cols=311 Identities=22% Similarity=0.297 Sum_probs=256.8
Q ss_pred hHHHHHHhCCCCCCeEEcCCCCCCCCCCHH-HHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPE-VREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
....+..+|....++|+|+.|+||+++++. +.+ ... ..||++. .+||++++++++. ++|++|+|+++++.+
T Consensus 8 ~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~--~~~---~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al~~ 79 (330)
T PRK05664 8 LRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPA--DAW---ARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAIQA 79 (330)
T ss_pred HHHHHHHcCCCHHHheeecCCcCCCCCCCcccCH--HHH---HhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHHHH
Confidence 344455566555678999999999977632 211 111 4488754 8999999999995 699999999999998
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++. +.+||+|++++|+|+.|...++..|++++.++. +++++.+. ++++++++|||||||.+++.+++.
T Consensus 80 ~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~--------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~ 147 (330)
T PRK05664 80 LPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE--------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLL 147 (330)
T ss_pred HHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech--------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHH
Confidence 864 579999999999999999999999999999974 24555553 678999999999999999999999
Q ss_pred HHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHH
Q 014594 242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~ 317 (422)
+|++. +++||+||+|.++....+.. .....+++++++||||.||++|+|+||+++++++++.+.....+++.+.+
T Consensus 148 ~l~~~~~~~~~~iI~DE~y~~~~~~~s~~-~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~~~ 226 (330)
T PRK05664 148 AWHARLAARGGWLVVDEAFMDNTPQHSLA-ACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGP 226 (330)
T ss_pred HHHHHHHhcCCEEEEECCcccCCCccccc-ccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCCHH
Confidence 98753 89999999999886433332 33346789999999999999999999999999999999988888899999
Q ss_pred HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014594 318 AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE 396 (422)
Q Consensus 318 ~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~ 396 (422)
.|.++.++|++..+.+ .++.++++++++.+.|++++. .+.++.++|+|++++ ++.++.+.|.++||.|+.+.
T Consensus 227 ~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~~~~f~~~~~~---~~~~~~~~l~~~gi~v~~f~--- 299 (330)
T PRK05664 227 TRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGL-TPAGGCALFQWVRTE---DAAALHEFLARRGILTRLFE--- 299 (330)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCcceEEEEecC---CHHHHHHHHHHCCeEEEECC---
Confidence 9999999999887777 889999999999999999863 333334488998875 67899999999999999753
Q ss_pred CCCeEEEEec-ChhhHHHHHHHHhhh
Q 014594 397 LKGYVRVSVG-KPEHTDALMECLMHL 421 (422)
Q Consensus 397 ~~~~iRis~~-~~~~~~~l~~al~~l 421 (422)
..+++||+++ +.+++++|.++++++
T Consensus 300 ~~~~iRis~~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 300 QPASLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 3579999999 677789999999876
No 64
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-45 Score=356.38 Aligned_cols=324 Identities=23% Similarity=0.351 Sum_probs=272.8
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++++|+.|++++++++.+.+++.+. . ....|++ .|..+||+++++++ | +++++|++|+|+++++..++..
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence 46799999999999999999998763 2 2245865 48899999999985 6 7889999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++++||.|+++.|+|..+...++..|++++.++.+ .+|.+|++++++.++ .+++++++++||||||.+++.+++++
T Consensus 104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999964 346799999999986 68999999999999999999988888
Q ss_pred HHcC----CCeEEEccCCccccCC-C-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594 243 ILEM----PILVVLDEAYTEFSGL-E-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~-~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~ 311 (422)
|++. ++++|+||+|.++.++ + .. .......+++++++||||.||++|+|+||+++++++++.+.+... .
T Consensus 183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~ 262 (382)
T PRK06108 183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT 262 (382)
T ss_pred HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence 8764 9999999999998764 2 11 222223578999999999999999999999999999998876643 3
Q ss_pred CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594 312 YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI 387 (422)
++++.+.|.++..+|++. ++++ .+++++++++.+.+.|++++.+.+ .|.+++|+|+++++..+..++++.|+ ++||
T Consensus 263 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV 342 (382)
T PRK06108 263 SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGL 342 (382)
T ss_pred cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCE
Confidence 567889999999999874 6777 888999999999999988754543 46678899999986667889999886 7899
Q ss_pred EEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++++..+ ..++++||+++. +.+++.+++++|
T Consensus 343 ~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l 376 (382)
T PRK06108 343 GLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERL 376 (382)
T ss_pred EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHH
Confidence 99998753 346899999998 357888888876
No 65
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=355.24 Aligned_cols=325 Identities=23% Similarity=0.328 Sum_probs=268.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~-~~~~~lr~~la~~~----~~--~-~~~i~~~~G~~~al~~~~ 163 (422)
.++++|+.|++++++++.+.+++.+. . ....|+. .|..++|+++++++ |+ + +++|++|+|+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 35799999999999999999998762 2 2245744 47788888887765 65 3 678999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
..++++||+|+++.|+|..+...++..|++++.++.++++++|++++++.++ +++|+|+++|||||||.+++.+++++|
T Consensus 107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i 185 (389)
T PRK05957 107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV 185 (389)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999998888888899999999987788999999999997 689999999999999999997777776
Q ss_pred HcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594 244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~ 313 (422)
++. |+++|+||+|.+|.++.. .....+..+++++++||||.||++|+|+||+++++++++++...... .+
T Consensus 186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T PRK05957 186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC 265 (389)
T ss_pred HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence 553 999999999999886531 11222445689999999999999999999999999999999877654 45
Q ss_pred CcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCC-cc-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014594 314 VSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFL-NP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM 388 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~-~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~ 388 (422)
.+.+.|.++..+|+++ +|++ .++.++++++.+.+.|++++.. .+ .|.+++|+|++++.+.++.++++.|. ++||.
T Consensus 266 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~ 345 (389)
T PRK05957 266 PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVA 345 (389)
T ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEE
Confidence 6778999999999874 6777 7788999999999999987543 43 35667899999987788999999987 68999
Q ss_pred EEeCCCCCC--CCeEEEEecChhhHHHHHHHHhhh
Q 014594 389 IRHYNNKEL--KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~~~--~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++++..++. ++++||+++..+ .+++.+++++|
T Consensus 346 v~pg~~f~~~~~~~iRis~~~~~-~~~l~~~~~~l 379 (389)
T PRK05957 346 VIPGTTFGMKNGCYLRIAYGALQ-KATAKEGIERL 379 (389)
T ss_pred EccchhhCCCCCCEEEEEEecCC-HHHHHHHHHHH
Confidence 999876432 569999998643 36677777765
No 66
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-44 Score=355.05 Aligned_cols=332 Identities=19% Similarity=0.280 Sum_probs=274.5
Q ss_pred HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHH
Q 014594 88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADE 157 (422)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~ 157 (422)
.++..++.+.++|+.+++++.+++.+.+++.+. . ....| +..|.++||++++++++ +++++|++|+|+++
T Consensus 22 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 101 (386)
T PRK07550 22 AGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ 101 (386)
T ss_pred HHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence 334345667899999999998888888888752 1 23568 45689999999999873 57899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++..++.+++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++.+++.++ .+++++++++||||||.++
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~~ 180 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVVY 180 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCccc
Confidence 9999999999999999999999999998889999999999974 456789999999997 5899999999999999999
Q ss_pred CHHHHHHHHcC----CCeEEEccCCccccCCCc-hhhhh---hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~---~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~ 307 (422)
+.+++++|++. ++++|+||+|.+|.++.. ..... +..+++++++||||.||++|+|+||+++++++++.+.+
T Consensus 181 ~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~ 260 (386)
T PRK07550 181 PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEK 260 (386)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHH
Confidence 98877777663 999999999998865321 11111 22467999999999999999999999999999998887
Q ss_pred hcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594 308 AKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL 382 (422)
Q Consensus 308 ~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L 382 (422)
.... .+++.+.|.++..++++ .+|.+ .++.++++++.+.+.|++++.+.+.+.+++|+|++++. +.++.++++.|
T Consensus 261 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l 340 (386)
T PRK07550 261 FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRL 340 (386)
T ss_pred HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEEEecCCCCCCCHHHHHHHH
Confidence 7654 45688999999999987 56777 88899999999999998874445567788999999986 67899999987
Q ss_pred H-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 A-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
. ++||.+.++..+. .++++||+++... .+++.+++++|
T Consensus 341 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~-~~~~~~~~~~l 381 (386)
T PRK07550 341 AKEAGILCLPGTMFGPGQEGYLRLAFANAD-VAGIGELVERL 381 (386)
T ss_pred HHhcCEEEeCchhhCCCCCCEEEEEeecCC-HHHHHHHHHHH
Confidence 6 7899999987642 3679999998644 36777777765
No 67
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=7.8e-45 Score=359.04 Aligned_cols=317 Identities=22% Similarity=0.343 Sum_probs=255.3
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI 159 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al 159 (422)
+.++++|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++ ++++++|++|+|+++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 45689999999999999988887765 21 22567 6678999999999986 67899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-----------EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
.+++. ++++||+|++++|+|..|...++..|++ ++.++.+. ++.+|++ ++++|+|++||
T Consensus 113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n 184 (409)
T PRK07590 113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF 184 (409)
T ss_pred HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence 98765 6789999999999999999999999987 88888643 3444422 25899999999
Q ss_pred CCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecC
Q 014594 227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
||||||.+++.+++++|++. +++||+||+|.+|.+++. .+..++. .+++|+++||||.||++|+|+||++++
T Consensus 185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 99999999999999998764 999999999999876442 1222222 357899999999999999999999999
Q ss_pred HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCC
Q 014594 299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNP-YPS 360 (422)
Q Consensus 299 ~~~~~~l------------~~-~~~~-~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~ 360 (422)
+++++.+ .. .... .+++.+.|.++..+|.+. .|++ .++.++++++.+.+.|++++ +.+ .|.
T Consensus 265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~ 343 (409)
T PRK07590 265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV 343 (409)
T ss_pred HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Confidence 9998721 11 1223 357889999999999753 5677 88899999999999999986 444 456
Q ss_pred CceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++|+|++++++.++.++.+.|. ++||.+.++..++ ..+++||++..+ .+++.+++++|
T Consensus 344 g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl 405 (409)
T PRK07590 344 NAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGS--RENVLEAMERI 405 (409)
T ss_pred cceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCC--HHHHHHHHHHH
Confidence 89999999987777888988877 6799999987643 357999997544 36788888876
No 68
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=3.1e-44 Score=344.72 Aligned_cols=322 Identities=32% Similarity=0.465 Sum_probs=275.0
Q ss_pred CCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHH
Q 014594 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI 159 (422)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al 159 (422)
+.+++.+++++|.+..++++|+.|+|+++++ ..+.. .....+||++...++|+++++++++++++|++|+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIP--ASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI 77 (330)
T ss_pred CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhcc--hHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence 4568889999998888999999999999875 22211 1222668877679999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
..+.+. +.+| .|+++.|+|..+...++..|.+++.++ |++.+++.+. +++++++++||||||.+++.++
T Consensus 78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~ 146 (330)
T TIGR01140 78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET 146 (330)
T ss_pred HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence 998775 5777 699999999999999999999999987 7899999884 5789999999999999999999
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCc
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS 315 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~ 315 (422)
+++|++. |+++|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+......++.+
T Consensus 147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s 226 (330)
T TIGR01140 147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN 226 (330)
T ss_pred HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence 9888764 999999999998876433333233468899999999999999999999999999999999888888999
Q ss_pred HHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594 316 VAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 316 ~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 394 (422)
.++|.++..++++.+|.+ .+++++++++.+.+.|++++.+.+.|+.++|+|++++ +..++.+.|+++||.+.++..
T Consensus 227 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~ 303 (330)
T TIGR01140 227 GPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP---DAAALHEALARRGILIRDFDN 303 (330)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCC
Confidence 999999999999888887 8899999999999999999866667788999999986 467899999999999999887
Q ss_pred CC--CCCeEEEEecChhhHHHHHHHHh
Q 014594 395 KE--LKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 395 ~~--~~~~iRis~~~~~~~~~l~~al~ 419 (422)
+. ..+++||++++..+.+.|..+++
T Consensus 304 f~~~~~~~iRi~~~~~~~~~~~~~~l~ 330 (330)
T TIGR01140 304 FPGLDPRYLRFALPTDEENDRLEEALA 330 (330)
T ss_pred CCCCCCCEEEEEecCHHHHHHHHHhhC
Confidence 43 35799999998766677776653
No 69
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.9e-44 Score=351.26 Aligned_cols=324 Identities=23% Similarity=0.327 Sum_probs=262.9
Q ss_pred HHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc----C---CCCCCEEEeCCH
Q 014594 84 EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G---LESDHILVGCGA 155 (422)
Q Consensus 84 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~~i~~~~G~ 155 (422)
..++......+.++++|+.|++..+.++.+.+++.+.....+|+++ |..+||+++++++ | +++++|++|+|+
T Consensus 16 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~ 95 (364)
T PRK07865 16 APAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGS 95 (364)
T ss_pred HHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccCh
Confidence 3344333344567899999987777678888888764333578765 7899999999997 3 668999999999
Q ss_pred HHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 156 DELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 156 ~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
++++..++..+ +++||.|+++.|+|+.|...++..|++++.++. +++++ +.++++|+++|||||||.+
T Consensus 96 ~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 96 KELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGRV 164 (364)
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCcc
Confidence 99999998887 799999999999999999999999999998752 23322 2578999999999999999
Q ss_pred CCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh------cCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594 235 INDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (422)
Q Consensus 235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~ 304 (422)
++.+++++|++. ++++|+||+|.++.+++....... ..+++++++||||.|+++|+|+||+++++++++.
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~ 244 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAE 244 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHH
Confidence 999999888753 999999999999876542222111 3468999999999999999999999999999999
Q ss_pred HHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594 305 LWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 381 (422)
Q Consensus 305 l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~ 381 (422)
+..... .++++.+.|.++..+|++.++.+ .++.++++++.+.+.|++.++....|++++|+|++++ .+..++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~ 322 (364)
T PRK07865 245 LLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRG--EDCWDTVAW 322 (364)
T ss_pred HHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCC--CCHHHHHHH
Confidence 886653 46789999999999999877877 8889999999999999988643334667789999884 456788888
Q ss_pred HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 382 LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 382 L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|.++||.+.++..++ .++++||+++.. .+++++++++|+
T Consensus 323 l~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~~~~~~~~l~ 363 (364)
T PRK07865 323 LAERGILVAPGDFYGPAGAQHVRVALTAT--DERIAAAVERLA 363 (364)
T ss_pred HHHCCEEEeCccccCcCCCCEEEEEecCC--HHHHHHHHHHhh
Confidence 999999999977533 468999999864 377999988874
No 70
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-44 Score=353.28 Aligned_cols=324 Identities=21% Similarity=0.300 Sum_probs=268.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++++|+.|.++.+.++.+.+++.+ . .....|+++ |..+||+++++++ | ++++ +|++|+|+++++..++.
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 105 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL 105 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence 4679999999988878888877665 2 223668765 7899999999986 3 5677 99999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
.++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++.+++.+. .++|+++++|||||||.+++.+++++|
T Consensus 106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence 999999999999999999999999999999999974 468899999999986 689999999999999999999998887
Q ss_pred HcC----CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594 244 LEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~ 313 (422)
++. ++++|+||+|.++.+++. ..... ...+++++++||||.||++|+|+||+++++++++.+...... ++
T Consensus 185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~ 264 (387)
T PRK08912 185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT 264 (387)
T ss_pred HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence 653 999999999998876431 12222 225789999999999999999999999999999998776654 66
Q ss_pred CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC---CCCHHHHHHHHH-hCCc
Q 014594 314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS---GMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~---~~~~~~~~~~L~-~~gI 387 (422)
.++..|.++..+|.. .+|.+ .++.++++++.+.+.|++++.....+.+++|+|+++++ ..++.++++.|+ ++||
T Consensus 265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV 344 (387)
T PRK08912 265 TPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV 344 (387)
T ss_pred CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE
Confidence 777788888887754 57777 89999999999999999986433345567889999974 357888999886 6899
Q ss_pred EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.++..+ ...+++||+++.+ .+.+.+++++|
T Consensus 345 ~v~pg~~f~~~~~~~~~iRl~~~~~--~~~l~~~l~rl 380 (387)
T PRK08912 345 AAIPVSAFYEEDPVTSVVRFCFAKR--DATLDEAVERL 380 (387)
T ss_pred EEecchhhCCCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence 99998753 2358999999975 37788888876
No 71
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-44 Score=351.95 Aligned_cols=324 Identities=23% Similarity=0.418 Sum_probs=270.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++ ++++++|++|+|+++++.+++.+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 112 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence 46899999999998888888888763 2 22456 6678999999999987 36789999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
++++||.|++++|+|..+...+...|++++.++.+. ++.+|++.+++.++ .++++++++|||||||.+++.+++.+|
T Consensus 113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l 191 (391)
T PRK08361 113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI 191 (391)
T ss_pred hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence 999999999999999999999999999999998643 56899999999997 689999999999999999997777777
Q ss_pred Hc---C-CCeEEEccCCccccCCCc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCc
Q 014594 244 LE---M-PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS 315 (422)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~ 315 (422)
++ . ++++|+||+|.+|.+++. ...... ..+++++++||||.||++|+|+||+++++++++.+..... .++++
T Consensus 192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
T PRK08361 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA 271 (391)
T ss_pred HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence 55 3 999999999999875322 112111 3468999999999999999999999999999998876654 36788
Q ss_pred HHHHHHHHHHccCCh---HHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014594 316 VAAEVAACAALQNPI---YLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM 388 (422)
Q Consensus 316 ~~~~~aa~~~L~~~~---~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~ 388 (422)
.+.|.++..+|+++. +++ .++.++++++.+.+.|++++++.+ .|.+++|+|+++++ +.++.++.+.|+ ++||.
T Consensus 272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~ 351 (391)
T PRK08361 272 SFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVV 351 (391)
T ss_pred hHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEE
Confidence 999999999998753 466 888999999999999998855554 45667889999984 568899998887 68999
Q ss_pred EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.++..++ ..+++||+++.++ +++.+++++|
T Consensus 352 v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l 384 (391)
T PRK08361 352 VIPGTAFGKAGEGYIRISYATSK--EKLIEAMERM 384 (391)
T ss_pred EcCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 99987643 3589999999754 5788888876
No 72
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=329.36 Aligned_cols=330 Identities=25% Similarity=0.364 Sum_probs=276.1
Q ss_pred HhCCCC--CCeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 89 QLGRKP--EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 89 ~~~~~~--~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
+|...+ .|++.|...+++|+.+|+|.+|+.+ .+++ .+|| .+..++-+++++|+ .++++.|++++|...+
T Consensus 17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg 95 (388)
T COG1168 17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG 95 (388)
T ss_pred eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence 344444 7899999999999999999999997 5665 7787 44566777777764 5688899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
+..+++.+.++||.|++..|.|+++....+..|.+++..|+ +..+.+|+++||+++.++++|++++||||||||.++
T Consensus 96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw 175 (388)
T COG1168 96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW 175 (388)
T ss_pred HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence 99999999999999999999999999999999999999994 345678999999999878889999999999999999
Q ss_pred CHHHHHHHHcC----CCeEEEccCCccccCCC-chhhh--hh--cCCcEEEEccChhhhccccccceeeec-CHHHHHHH
Q 014594 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEW--VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL 305 (422)
Q Consensus 236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~--~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l 305 (422)
+.|+|.+|++. |+.||+||+|+++...+ .+... +. -.++.+++.|.||+|+++|+.+++++. ++++..++
T Consensus 176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~ 255 (388)
T COG1168 176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF 255 (388)
T ss_pred cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHH
Confidence 99999998775 99999999999998655 33222 22 247899999999999999999999887 45554444
Q ss_pred HHh-c--CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHH
Q 014594 306 WRA-K--QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK 377 (422)
Q Consensus 306 ~~~-~--~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~ 377 (422)
.+. . ...++|.++..|..++++++ .|++ .++.++.+++++.+.|++ +|++.+. |++++.+|+++.+ +.+..+
T Consensus 256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~ 335 (388)
T COG1168 256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE 335 (388)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence 433 2 23678999999999999985 7999 999999999999999987 6778765 4455557999875 677789
Q ss_pred HHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 378 LKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 378 ~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+.|+ +.+|.+.+|..+ ++.+++|++++++. ..|++|+++|
T Consensus 336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr--~~L~eal~ri 380 (388)
T COG1168 336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPR--AILEEALERL 380 (388)
T ss_pred HHHHHHHhhcEeccCCCccCcCCCceEEEecCCCH--HHHHHHHHHH
Confidence 999988 789999998884 45689999999987 4488888876
No 73
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=5e-44 Score=350.76 Aligned_cols=325 Identities=22% Similarity=0.339 Sum_probs=271.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~-~~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++++.+.+++.+. . ....|+. .|..++|+++++++ ++ +++ +|++|+|+++++..++.
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 109 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL 109 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence 45799999999998889888888763 2 2356854 47899999999864 54 344 89999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
.++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ .+++++++++||||||.+++.+++++|
T Consensus 110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i 188 (386)
T PRK09082 110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL 188 (386)
T ss_pred HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999974 468899999999997 689999999999999999999999888
Q ss_pred HcC----CCeEEEccCCccccCCCc---hh-hhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLES---RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~ 313 (422)
++. ++++|+||+|.++.+++. .. ......+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~ 268 (386)
T PRK09082 189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT 268 (386)
T ss_pred HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence 764 999999999998875431 12 22223578999999999999999999999999999999887763 578
Q ss_pred CcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014594 314 VSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM 388 (422)
Q Consensus 314 ~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~gI~ 388 (422)
++.+.|.++..+++ ++++++ .++.++++++.+.+.|++.+.....+.+++|+|+++|+ +.+..++++.|. ++||.
T Consensus 269 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 348 (386)
T PRK09082 269 VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVA 348 (386)
T ss_pred CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEE
Confidence 89999999999997 567777 88899999999999999876333345677889999973 567889999875 88999
Q ss_pred EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 389 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 389 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
+.++..+ ...+++||+++.+ .+.+.+++++|+
T Consensus 349 v~pg~~f~~~~~~~~~~Ri~~~~~--~~~l~~~~~rl~ 384 (386)
T PRK09082 349 AIPLSVFYADPFPHRLVRLCFAKQ--EETLDAAAERLC 384 (386)
T ss_pred EeCcHHhCCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 9998753 2357999999974 377999998874
No 74
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.3e-43 Score=349.92 Aligned_cols=326 Identities=21% Similarity=0.310 Sum_probs=257.6
Q ss_pred CCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~ 161 (422)
.+.++++|+.|.+ ++++++.+.+++.+ ......|+++ |..+||+++++++ ++++++|++|+|+++++..
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~ 110 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVM 110 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHH
Confidence 4567899999765 46688888888765 3334678766 6899999999998 6889999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++++++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++++++.+. .++++|+++|||||||.+++.++
T Consensus 111 ~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~~~~~ 189 (404)
T PRK09265 111 AMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKEL 189 (404)
T ss_pred HHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcCCCHHH
Confidence 999999999999999999999999998899999988753 357799999999986 68999999999999999999777
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec--CHH----HHHHHH
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS----IIEYLW 306 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~----~~~~l~ 306 (422)
+++|++. |+++|+||+|.++.+++. .........++++++||||.||++|+|+||+++ +++ +++.+.
T Consensus 190 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~ 269 (404)
T PRK09265 190 LEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLD 269 (404)
T ss_pred HHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHH
Confidence 7777653 899999999999875432 222222334689999999999999999999996 443 444443
Q ss_pred Hhc-CCCCCcHHHHHHHHHHccCChHHH----HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCC----CH-
Q 014594 307 RAK-QPYNVSVAAEVAACAALQNPIYLE----VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM----DA- 375 (422)
Q Consensus 307 ~~~-~~~~~~~~~~~aa~~~L~~~~~~~----~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~----~~- 375 (422)
... ..+++|.++|.++.++|.+.++.. ..+++.++++.+.+.|++++.+. ..|++|+|+|++++... +.
T Consensus 270 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~ 349 (404)
T PRK09265 270 MLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDE 349 (404)
T ss_pred HHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHH
Confidence 332 246788999999999997654333 23567788999999998875454 45778999999997431 33
Q ss_pred HHHHHHHHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+.+.|.++||.+.++..++ .++++||+++.+ .+++.+++++|
T Consensus 350 ~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~--~e~l~~~l~rl 395 (404)
T PRK09265 350 QFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPR--VDDLEEAIGRI 395 (404)
T ss_pred HHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 456677779999999987743 468999999754 36677777776
No 75
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=8e-44 Score=353.43 Aligned_cols=329 Identities=19% Similarity=0.238 Sum_probs=258.7
Q ss_pred CCCCCeEEcCCCCC---CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHH
Q 014594 92 RKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADEL 158 (422)
Q Consensus 92 ~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~a 158 (422)
..+.++++++.|++ ++.+|+.+.+++.+. .....| |..|..+||+++++++ | +++++|++|+|++++
T Consensus 29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred hccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 34567899999988 678888888887763 122567 4568999999999997 3 678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCC--CCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~ 234 (422)
+..++. ++++||.|+++.|+|+.|.... ...|++++.++.+ ++|.+|+++|++.+.+ ++++++++++||||||.+
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~ 187 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV 187 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence 999986 8899999999999999887543 3468899988854 4678999999999863 468999999999999999
Q ss_pred CCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-----H---
Q 014594 235 INDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----L--- 299 (422)
Q Consensus 235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-----~--- 299 (422)
++.+++++|++. +++||+||+|.++.+++. .+..+....++|+++||||.|++||+|+||++++ +
T Consensus 188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~ 267 (433)
T PRK06855 188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK 267 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence 999999998764 999999999999876432 2222222236799999999999999999999973 2
Q ss_pred HHHHHHHHhcC-CCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCC
Q 014594 300 SIIEYLWRAKQ-PYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM 373 (422)
Q Consensus 300 ~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~ 373 (422)
.+++.+..... ..+++.+.|.++..+|+++ +|++ .++.++++++.+.+.|++++.+. ..|.+++|+|+++|++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~ 347 (433)
T PRK06855 268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGV 347 (433)
T ss_pred HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccccc
Confidence 23344433322 3467889999999999875 4676 88899999999999998874444 35678899999998542
Q ss_pred ---------------------------CHHHHHHHH-HhCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 374 ---------------------------DAKKLKDDL-AKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 374 ---------------------------~~~~~~~~L-~~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
+..+++..+ .++||.+.||..++ ...++||+++... .++|.+++++|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~-~~~i~~~~~~l~ 424 (433)
T PRK06855 348 LNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERD-EEKFEWIYQTLA 424 (433)
T ss_pred ccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCc-HHHHHHHHHHHH
Confidence 355666554 48899999998753 2357999999744 488999988763
No 76
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-44 Score=356.78 Aligned_cols=327 Identities=21% Similarity=0.270 Sum_probs=261.5
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCE
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHI 149 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i 149 (422)
.+..+|+|+..||.+. .+++.+.+.+. . ....|.+. |..+||+++|++++ +++++|
T Consensus 45 np~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 45 NPSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred CCCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 4566899999999874 35555555431 1 11336554 78999999999873 688999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeE
Q 014594 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 150 ~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
++|+|+++++++++.++++|||.|+++.|+|+.+...+. ..|+++++++.+ ++|.+|++++++++++ .++|+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 999999999999999999999999999999999987776 479999999864 4577999999998863 47899
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chhhhh------hcCCcEEEEccChhhhcc
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRMEWV------KKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~~~~------~~~~~~i~~~S~SK~~~~ 287 (422)
|+++|||||||.+++.+++++|+++ ++++|+||+|.++.++. +..... +..+++++++||||.||+
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 9999999999999999999998764 99999999999866542 112211 114689999999999999
Q ss_pred ccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHH----H-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594 288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL----E-VKEALIKERERLFKLLKDVPFLNPYPSY 361 (422)
Q Consensus 288 ~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~----~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 361 (422)
+|+|+||+++ ++++++.+........+|.+.|.++..+|++++|. . .+++++++++.+.+.|++.+.....+.+
T Consensus 284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~a 363 (447)
T PLN02607 284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNA 363 (447)
T ss_pred CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCe
Confidence 9999999998 67787777766555568899999999999997654 4 7788999999999999987643345678
Q ss_pred ceEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 362 SNFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 362 ~~f~~~~~~~~~------~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|+|+|+++++.. ...++.+.|+ ++||.+.||..+ ..++|+||+|+..++ +.|.+++++|
T Consensus 364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~-~~l~~gl~Ri 431 (447)
T PLN02607 364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSE-DTLEVALKRI 431 (447)
T ss_pred eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCH-HHHHHHHHHH
Confidence 899999997421 2346777776 579999998874 347999999997432 6788888886
No 77
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.2e-44 Score=348.86 Aligned_cols=324 Identities=24% Similarity=0.375 Sum_probs=268.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~-~~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~ 164 (422)
+++++|+.+.+.+++++.+.+++.+. . ....|+ ..|..+||+++++++ | ++++ +|++|+|+++++.+++.
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR 107 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46799999998888888888888763 2 235674 568999999999997 4 4677 99999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
.++++||+|+++.|+|..|...++..|++++.++.+ +++.+|++.+++.+. .+++++++++||||||.+++.+++++|
T Consensus 108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l 186 (387)
T PRK07683 108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI 186 (387)
T ss_pred HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999864 567789999999987 689999999999999999999988888
Q ss_pred HcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~ 314 (422)
++. |+++|+||+|.++.+++.. ....+..+++++++||||.||++|+|+||+++++++++.+..... ..++
T Consensus 187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~ 266 (387)
T PRK07683 187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA 266 (387)
T ss_pred HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence 764 8999999999998754322 222224578999999999999999999999999999998876543 2446
Q ss_pred cHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHH-HhCCcEEE
Q 014594 315 SVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL-AKMGVMIR 390 (422)
Q Consensus 315 ~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L-~~~gI~v~ 390 (422)
+.+.|.++..+|.++ .+.+ .+++++++++.+.+.|++.+.....|++++|+|+.++. +.++.++...+ .++||.++
T Consensus 267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~ 346 (387)
T PRK07683 267 SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVV 346 (387)
T ss_pred ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc
Confidence 778999999999764 5666 88889999999999999876333456677889998874 55777887665 58899999
Q ss_pred eCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 391 HYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 391 ~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++..+ ..++++||+++.+ .+++.+++++|
T Consensus 347 pg~~f~~~~~~~~Ri~~~~~--~~~~~~al~~l 377 (387)
T PRK07683 347 PGSAFSEYGEGYVRLSYAYS--IETLKEGLDRL 377 (387)
T ss_pred CchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 98763 2368999999974 46788888876
No 78
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-44 Score=360.31 Aligned_cols=327 Identities=18% Similarity=0.248 Sum_probs=256.2
Q ss_pred CCCCeEEcCCCCCC----------------CCC-------------CHHHHHHHhc----CC-CCCCCCCc-chHHHHHH
Q 014594 93 KPEDIVKIDANENP----------------YGP-------------PPEVREALGQ----LK-FPYIYPDP-ESRRLRAA 137 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----------------~~~-------------~~~v~~al~~----~~-~~~~y~~~-~~~~lr~~ 137 (422)
++.++|+|+.|++. +.. |..+++++.+ .. ....|+.. |..+||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 45799999999985 555 3366666543 11 22558554 89999999
Q ss_pred HHHHcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHH
Q 014594 138 LAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (422)
Q Consensus 138 la~~~~------~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 208 (422)
++++++ +++++|++|+|+++++..++++++ ++||.|+++.|+|+.|...++..|++++.++.+ ++|.+|++
T Consensus 124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~ 203 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQE 203 (481)
T ss_pred HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHH
Confidence 999973 678999999999999999999998 799999999999999999999999999999964 45889999
Q ss_pred HHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--ch---hhh---hhc
Q 014594 209 LIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---VKK 271 (422)
Q Consensus 209 ~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~~~ 271 (422)
++++.+++ .++|+++++|||||||.+++.+++++|++. +++||+||+|.++.+++ .. ... +..
T Consensus 204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~ 283 (481)
T PTZ00377 204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA 283 (481)
T ss_pred HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence 99999863 178999999999999999999888888764 99999999999987632 11 111 111
Q ss_pred ----CCcEEEEccChhh-hccccccceeeec---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC--------hHHH-
Q 014594 272 ----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------IYLE- 333 (422)
Q Consensus 272 ----~~~~i~~~S~SK~-~~~~G~r~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~--------~~~~- 333 (422)
..++++++||||. ++++|+|+||+++ ++++++.+.+.... ++.+.++|.++..+|++. .|.+
T Consensus 284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~ 363 (481)
T PTZ00377 284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRE 363 (481)
T ss_pred cccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 1268999999997 6999999999986 89999999877654 478999999999999641 1433
Q ss_pred ---HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC--CCC----------CHHHHHHH-HHhCCcEEEeCCCCC
Q 014594 334 ---VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--SGM----------DAKKLKDD-LAKMGVMIRHYNNKE 396 (422)
Q Consensus 334 ---~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~--~~~----------~~~~~~~~-L~~~gI~v~~~~~~~ 396 (422)
.++.++++++.+.+.|++++++.+ .|++|+|+|++++ .+. +...++.. |.++||.+.+|+.++
T Consensus 364 ~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 364 RDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 334578999999999999855554 5678899997763 211 23344444 458899999998754
Q ss_pred ---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 397 ---LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 397 ---~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..+++|||++.+ .+++.+++++|
T Consensus 444 ~~~~~~~~Rls~~~~--~e~l~~~l~rl 469 (481)
T PTZ00377 444 QKPGTYHFRITILPP--EEQIEEMVKKI 469 (481)
T ss_pred CCCCCCEEEEEECCC--HHHHHHHHHHH
Confidence 356999999944 36687877776
No 79
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.5e-44 Score=354.57 Aligned_cols=319 Identities=21% Similarity=0.313 Sum_probs=255.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCC-CCcchHHHHHHHHHHc---CCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y-~~~~~~~lr~~la~~~---~~~~~~i~~~~G~~~al~~~ 162 (422)
+.++++|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++ ++++++|++|+|+++++..+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l 111 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL 111 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence 46789999999999999988887765 21 12457 6678999999999986 68899999999999999987
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCC-----------EEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
+. ++.+||+|+++.|+|..|...++..|+ +++.++.+. ++..|++. ..++++|++|||||
T Consensus 112 ~~-l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N 184 (402)
T TIGR03542 112 QS-LFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN 184 (402)
T ss_pred HH-hcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence 54 678999999999999999999999999 999988642 34444321 25789999999999
Q ss_pred ccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHH
Q 014594 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
|||.+++.+++++|++. +++||+||+|.+|.+++. .....+. .+++++++||||.||++|+|+||+++++++
T Consensus 185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l 264 (402)
T TIGR03542 185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL 264 (402)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence 99999999998888764 899999999999986542 1222222 367899999999999999999999999987
Q ss_pred H--------HHHHH-hcCC-CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEE
Q 014594 302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILC 367 (422)
Q Consensus 302 ~--------~~l~~-~~~~-~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~ 367 (422)
+ +.+.. .... .+++.+.|.++..++.+.. +.. .++.++++++.+.+.|++.+ +.+. +.+++|+|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f~~v 343 (402)
T TIGR03542 265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEHAPYLWV 343 (402)
T ss_pred hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCceeEEEE
Confidence 7 22222 2223 3688899999999998754 344 67788999999999999876 4443 468899999
Q ss_pred EeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 368 EVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
++++..++.++.+.|. ++||.++++..++ ..+|+||+++.. .+++.+++++|+
T Consensus 344 ~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l~ 399 (402)
T TIGR03542 344 KTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGK--RENIVEACERIK 399 (402)
T ss_pred ECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence 9987778889998887 6799999987643 358999998764 367999988863
No 80
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.5e-44 Score=346.85 Aligned_cols=325 Identities=24% Similarity=0.334 Sum_probs=265.3
Q ss_pred hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc-------CCCCCCEEEeCC
Q 014594 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG 154 (422)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~-------~~~~~~i~~~~G 154 (422)
+...+.+....+.++++|+.|++..++++.+.+++.+......|+++ |..+||+++++++ ++++++|++|+|
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G 88 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG 88 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence 34444545556678899999988788788888888764333678765 7899999999987 477899999999
Q ss_pred HHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 155 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++++..++..+ +++||.|+++.|+|+.+...++..|++++.++ |++.+ ...++++|++++|+||||.
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR 157 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence 999999999887 79999999999999999988899999998874 22322 2257899999999999999
Q ss_pred CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh------cCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
+++.+++++|++. |+++|+||+|.+|.+++.....+. ..+++++++||||.|+++|+|+||+++++++++
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA 237 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence 9999998887653 999999999998876543222221 246899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
.+.+... .++++.+.|.++.++|++..+.+ .++.++++++.+.+.|++.+.....|.++.|+|++++ .+..++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~--~~~~~~~~ 315 (357)
T TIGR03539 238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRG--EDAWDTVD 315 (357)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECC--CCHHHHHH
Confidence 8876654 36788999999999998877777 8889999999999999987633345667788999985 36778888
Q ss_pred HHHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 381 DLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.|.++||.+.++..++ .++++||+++.+ .+++.+++++|.
T Consensus 316 ~l~~~gV~v~pg~~f~~~~~~~iRis~~~~--~~~i~~~~~~l~ 357 (357)
T TIGR03539 316 RLAELGILVAPGDFYGPAGSQHVRVALTAT--DERIAAAVARLT 357 (357)
T ss_pred HHHhCCEEECCccccCCCCCCeEEEEecCC--HHHHHHHHHhhC
Confidence 9999999999987632 368999999985 378999998874
No 81
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.4e-43 Score=347.97 Aligned_cols=325 Identities=27% Similarity=0.390 Sum_probs=265.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~----~~--~-~~~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++ ++ + +++|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46899999999999998888888762 2 22457 4457899999999987 33 3 4799999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.++++||+|++++|+|..+...++..|++++.++.+. ++.+|++.+++++++ .+++++++++||||||.+++.++++
T Consensus 110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~ 189 (391)
T PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK 189 (391)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999999999999999999643 578999999999863 3689999999999999999988888
Q ss_pred HHHcC----CCeEEEccCCccccCCC-chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594 242 KILEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~-~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~ 313 (422)
+|++. ++++|+||+|.++.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+..... ..+
T Consensus 190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~ 269 (391)
T PRK07309 190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA 269 (391)
T ss_pred HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence 88763 99999999999988633 2111111 3478999999999999999999999999999999887643 246
Q ss_pred CcHHHHHHHHHHccCCh-HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC--CHHHHHHHHH-hCCcE
Q 014594 314 VSVAAEVAACAALQNPI-YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM--DAKKLKDDLA-KMGVM 388 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~--~~~~~~~~L~-~~gI~ 388 (422)
++.+.|.++..+|++.. +.. .++.++++++.+.+.|+++++....|.+++|+|+++|.+. ++.++++.|. ++||.
T Consensus 270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~ 349 (391)
T PRK07309 270 ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA 349 (391)
T ss_pred CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEE
Confidence 78899999999998753 344 7788899999999999988643345667888999998543 5678887765 78999
Q ss_pred EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 389 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.++..+ ..+++|||+++.+ .+++.+++++|
T Consensus 350 v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~i~~l 382 (391)
T PRK07309 350 FIPGAAFGPYGEGYVRLSYAAS--METIKEAMKRL 382 (391)
T ss_pred EeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 9998863 3368999999864 36788877765
No 82
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.3e-43 Score=349.35 Aligned_cols=328 Identities=25% Similarity=0.367 Sum_probs=265.2
Q ss_pred CCCCCCeEEcCCCCC---CCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 91 GRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
+..+.++|+|+.|.+ ++++++.+.+++.+. . ....|+ ..|..+||+++++++ ++++++|++|+|++++
T Consensus 26 ~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 105 (398)
T PRK08363 26 EKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105 (398)
T ss_pred HhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 345578999999998 788899999988763 2 225684 568999999999997 3688999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-cC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+.+++.+++++||.|+++.|+|..+...++..|++++.+ +. ++++.+|++.+++.+. +++++++++|||||||.+++
T Consensus 106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcCcC
Confidence 999999999999999999999999999999999999888 43 3567799999999986 68999999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeec--CHHHHHHHHHh
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRA 308 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~~~~~l~~~ 308 (422)
.+++++|++. ++++|+||+|.++.+.+. ....+....++++++||||.|+++|+|+||+++ ++++++.+...
T Consensus 185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~ 264 (398)
T PRK08363 185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREA 264 (398)
T ss_pred HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHH
Confidence 8887777653 899999999998876442 223333456799999999999999999999997 77766665433
Q ss_pred c-----CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCCC--CCHHHH
Q 014594 309 K-----QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSG--MDAKKL 378 (422)
Q Consensus 309 ~-----~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~--~~~~~~ 378 (422)
. ..++.+.+.|.++..+|.+ .+|++ .+++++++++.+.+.|++++.+.+. |.+++|+|++++.. .+..++
T Consensus 265 ~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~ 344 (398)
T PRK08363 265 IDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEF 344 (398)
T ss_pred HHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHH
Confidence 2 2367899999999999975 57887 8899999999999999988555544 56677888888752 245566
Q ss_pred HHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.. |.++||.++++..++ .++|+||+++.+ .+++.+++++|
T Consensus 345 ~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 388 (398)
T PRK08363 345 VLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPP--VEILEEAMDRF 388 (398)
T ss_pred HHHHHHhCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 544 569999999988743 357999999854 36688887765
No 83
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.3e-43 Score=347.93 Aligned_cols=326 Identities=23% Similarity=0.340 Sum_probs=268.1
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~a 158 (422)
++.++++|+.|++. +++++++.+++.+ +. ....| +..|..++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 35689999999874 6788899888876 32 22467 55688999999999986 367899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+.+++++++++||+|+++.|+|..+...++..|++++.++. ++++++|++.+++.+. ++++++++++||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~ 187 (403)
T TIGR01265 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS 187 (403)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence 99999999999999999999999999999999999999885 3457899999999886 68999999999999999999
Q ss_pred HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC--HH-----HH
Q 014594 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II 302 (422)
Q Consensus 237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--~~-----~~ 302 (422)
.+++++|++. |+++|+||+|.+|.+++. ....+....++++++||||.|+++|+|+||++++ ++ ++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~ 267 (403)
T TIGR01265 188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL 267 (403)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence 8887777653 999999999999886432 2223333457999999999999999999999983 22 44
Q ss_pred HHHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCC-----
Q 014594 303 EYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG----- 372 (422)
Q Consensus 303 ~~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~----- 372 (422)
+.+..... .++++.+.|.++..+|++ ..+++ .+++++++++.+.+.|+.++++. ..|++|+|+|++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~ 347 (403)
T TIGR01265 268 QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEI 347 (403)
T ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCC
Confidence 55555443 467899999999999975 36777 88899999999999999875455 4688999999999743
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.++++.|. ++||.+.++..++.++++||+++.++ +.|.+++++|
T Consensus 348 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~~l 395 (403)
T TIGR01265 348 KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPE--SMLEEACSRI 395 (403)
T ss_pred CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 26788888865 88999999988777899999999754 5699998876
No 84
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-43 Score=346.75 Aligned_cols=325 Identities=22% Similarity=0.343 Sum_probs=270.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~~ 164 (422)
+.++++|+.|.+++++++.+.+++.+. . ...+|+++ |..+||+++++++ |+ ++++|++|+|+++++..++.
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~ 111 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALM 111 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH
Confidence 457899999999999889988888763 2 23568665 7899999998875 54 67899999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++++||.|+++.|+|..|.......|++++.++.+ +++.+|++.+++.+. .++++++++||+||||.+++.+++++
T Consensus 112 ~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~ 190 (402)
T PRK06107 112 ATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRA 190 (402)
T ss_pred HhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHHH
Confidence 999999999999999999988888889998888853 457799999999986 68999999999999999999999988
Q ss_pred HHc----C-CCeEEEccCCccccCCCc---hhhhh-h-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--
Q 014594 243 ILE----M-PILVVLDEAYTEFSGLES---RMEWV-K-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-- 310 (422)
Q Consensus 243 i~~----~-~~~li~Deay~~~~~~~~---~~~~~-~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-- 310 (422)
|++ . ++++|+||+|.++.+.+. ..... . ..+++++++||||.|+++|+|+||+++++++++.+.....
T Consensus 191 l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~ 270 (402)
T PRK06107 191 LADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQS 270 (402)
T ss_pred HHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhc
Confidence 875 3 789999999998765432 11222 1 2468999999999999999999999999999999888765
Q ss_pred CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC--------CC---CCHH
Q 014594 311 PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--------SG---MDAK 376 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~--------~~---~~~~ 376 (422)
.++++.+.|.++..+|+. ..|++ .++.++++++.+.+.|++++++.+ .|.+|+|+|++++ .+ .+..
T Consensus 271 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (402)
T PRK06107 271 SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQ 350 (402)
T ss_pred ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHH
Confidence 467899999999999974 56777 888999999999999998755554 4678899999873 12 2566
Q ss_pred HHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 377 KLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 377 ~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++.+.|. ++||.+++|..++..+++||+++.+ .+++.+++++|
T Consensus 351 ~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~--~e~l~~~l~~l 394 (402)
T PRK06107 351 DVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS--LETLEEACARI 394 (402)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 7776665 7899999998877789999999975 47788888876
No 85
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.4e-43 Score=334.00 Aligned_cols=297 Identities=28% Similarity=0.414 Sum_probs=243.5
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
.+.++|+|+.|+|+++ |+.+.+++.+ ......||. ...+|++++++++ ++|++|+|+++++.+++.. +.+||
T Consensus 6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~~-~~~gd 78 (311)
T PRK08354 6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGIL-ALRDR 78 (311)
T ss_pred CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHHh-hCCCC
Confidence 4567899999999997 5788888875 323356774 5789999999998 4899999999999988864 45899
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~ 247 (422)
+|+++.|+|..|...++..|++++.+ .+|++.+++.++ ++++++++|||||||.+++.+++++|++. +
T Consensus 79 ~vlv~~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~ 150 (311)
T PRK08354 79 KVIIPRHTYGEYERVARFFAARIIKG------PNDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN 150 (311)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEeec------CCCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999765 367899988875 56889999999999999999999999864 8
Q ss_pred CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~ 327 (422)
+++|+||+|.+|.+++... .++++++++||||.|+++|+|+||+++ +.+.+.....+++.+...+.++..+++
T Consensus 151 ~~li~De~y~~f~~~~~~~----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T PRK08354 151 ALLILDEAFIDFVKKPESP----EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE 223 (311)
T ss_pred cEEEEeCcchhcccccccc----CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence 9999999999998754221 367899999999999999999999998 567777777788888888888888887
Q ss_pred CC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe
Q 014594 328 NP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV 405 (422)
Q Consensus 328 ~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~ 405 (422)
+. +++. .++.++++++.+.+.+. .++.++|++++++ +++++++.|+++||.++++..++.++++||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~~~~~~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~ 293 (311)
T PRK08354 224 DDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSV 293 (311)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCCcEEEEECC---CHHHHHHHHHHCCeEEEecccCCCCCeEEEEe
Confidence 53 3333 44555555555544431 3566778878764 57889999999999999998876679999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014594 406 GKPEHTDALMECLMHL 421 (422)
Q Consensus 406 ~~~~~~~~l~~al~~l 421 (422)
+.++++++|.++++.+
T Consensus 294 ~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 294 RDREENEKLIRALREW 309 (311)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9988889999999876
No 86
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-43 Score=344.92 Aligned_cols=324 Identities=25% Similarity=0.346 Sum_probs=265.9
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-cchHHHHHHHHHHc-----CCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-~~~~~lr~~la~~~-----~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+.++++|+.|++++++++.+.+++.+. .....|+. .|..++|+++++++ ++++++|++|+|+++++..++..+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l 108 (397)
T PRK07568 29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI 108 (397)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence 346899999999999999999998763 33356754 48999999999997 478899999999999999999999
Q ss_pred cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCC-CHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~-d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++||+|++++|+|..+...++..|++++.++.+ +++.. |++++++.++ +++++|+++||+||||.+++.+++++|
T Consensus 109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 9999999999999999988888899999999964 34443 6799999986 689999999999999999998888887
Q ss_pred HcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC-CCC
Q 014594 244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ-PYN 313 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~-~~~ 313 (422)
++. ++++|+||+|.+|.+++. ...... ..+++++++||||.||++|+|+||++++ +++++.+.+... .++
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 267 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS 267 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence 763 999999999999875432 122222 2678999999999999999999999985 788887765544 478
Q ss_pred CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHh------
Q 014594 314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAK------ 384 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~------ 384 (422)
.+.+.|.++..+|++ .++++ .++.++++++.+.+.|++++.+. ..|.+++|+|++++. .+++++.+.|.+
T Consensus 268 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~-~~~~~~~~~l~~~~~~~~ 346 (397)
T PRK07568 268 PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV-DDAEDFAKWLLTDFNYNG 346 (397)
T ss_pred CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC-CCHHHHHHHHHhhccccc
Confidence 899999999999976 46777 88899999999999999885554 346777889999974 367889888874
Q ss_pred CCcEEEeCCCC----C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNK----E-LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~----~-~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.+.++..+ + .++++||+++... +++.+++++|
T Consensus 347 ~gv~v~pg~~f~~~~~~~~~~iRls~~~~~--~~~~~~~~~l 386 (397)
T PRK07568 347 ETVMVAPASGFYATPGLGKNEIRIAYVLNE--EDLKRAMEIL 386 (397)
T ss_pred ceEEEeCchHhcCCCCCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence 69999997653 2 2479999998542 6677777765
No 87
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-43 Score=343.96 Aligned_cols=326 Identities=26% Similarity=0.398 Sum_probs=270.3
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCC-CcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.++++|+.+++++++++++.+++.+ + .....|+ ..|..+||+++++++ ++++++|++|+|+++++..++
T Consensus 29 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 108 (393)
T PRK05764 29 QGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAF 108 (393)
T ss_pred ccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHH
Confidence 346789999999999988999888876 3 2234584 457899999999997 467889999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.+++++||.|+++.|+|..+...++..|++++.++.+ .++.+|++++++.++ ++++++++++|+||||.+++.++++
T Consensus 109 ~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~~~ 187 (393)
T PRK05764 109 MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEELE 187 (393)
T ss_pred HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-ccceEEEEECCCCCCCcccCHHHHH
Confidence 9999999999999999999999999999999999964 457899999999986 6899999999999999999988888
Q ss_pred HHHcC----CCeEEEccCCccccCCCc---hhhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES---RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~- 311 (422)
+|++. ++++|+||+|.++.+++. ....+ +..+++++++||||.++++|+|+||+++++++++.+......
T Consensus 188 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~ 267 (393)
T PRK05764 188 AIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHS 267 (393)
T ss_pred HHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhc
Confidence 77653 999999999998875432 22222 335789999999999999999999999999999998876653
Q ss_pred -CCCcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCC-----CHHHHHHHH
Q 014594 312 -YNVSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----DAKKLKDDL 382 (422)
Q Consensus 312 -~~~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~-----~~~~~~~~L 382 (422)
++++.+.|.++..+|+ ..++++ .++.++++++.+.+.|++++.+.+ .|.+++|+|++++... ++.++.+.|
T Consensus 268 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (393)
T PRK05764 268 TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEAL 347 (393)
T ss_pred ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHHH
Confidence 5788999999999997 356777 888899999999999998844443 4666789999987543 357888887
Q ss_pred H-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 A-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
. ++||.++++..+..++++||+++.+. +++.+++++|
T Consensus 348 ~~~~gi~v~~g~~f~~~~~vRis~~~~~--~~~~~~i~~l 385 (393)
T PRK05764 348 LEEAGVAVVPGIAFGAPGYVRLSYATSL--EDLEEGLERI 385 (393)
T ss_pred HHhCCEEEccccccCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 6 68999999877666899999998743 6677777765
No 88
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-42 Score=338.74 Aligned_cols=323 Identities=27% Similarity=0.443 Sum_probs=266.2
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP 169 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~ 169 (422)
+.++|+|+.|++++++++.+.+++.+. . ....|+++ |..++|+++++++++++++|++|+|+++++..++++++.+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~ 106 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP 106 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence 356899999999999999999998763 2 22457655 7899999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
||+|++++|+|..+...++..|++++.++.+ .++.+|++.+++.+. +++++++++||+||||.+++.+++++|++.
T Consensus 107 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~ 185 (380)
T PRK06225 107 GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEI 185 (380)
T ss_pred CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence 9999999999998888888999999999853 257899999999987 689999999999999999998888888764
Q ss_pred ----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-CCCCcHHHHHH
Q 014594 247 ----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVA 321 (422)
Q Consensus 247 ----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-~~~~~~~~~~a 321 (422)
|+++|+||+|.+|..+....... ..++++++.||||.+|++|+|+||+++++++++.+..... .++.+.+.|.+
T Consensus 186 a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (380)
T PRK06225 186 ARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEA 264 (380)
T ss_pred HHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHH
Confidence 99999999999876433222222 3478899999999999999999999999999998877643 57788999999
Q ss_pred HHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC-
Q 014594 322 ACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK- 395 (422)
Q Consensus 322 a~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~- 395 (422)
+..+|.. .+|.+ .++.++++++.+.+.|++++.. ...|.+++|+|++++. +.+..++.+.|.++||.++++..+
T Consensus 265 a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~ 344 (380)
T PRK06225 265 AIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS 344 (380)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC
Confidence 8888865 46767 7777888888899999886433 2457789999999864 568899999999999999987542
Q ss_pred --CCCCeEEEEecCh-hhHHHHHHHH
Q 014594 396 --ELKGYVRVSVGKP-EHTDALMECL 418 (422)
Q Consensus 396 --~~~~~iRis~~~~-~~~~~l~~al 418 (422)
..++++|++++.+ ++++++.++|
T Consensus 345 ~~~~~~~iR~s~~~~~e~l~~~~~~l 370 (380)
T PRK06225 345 KRFGDRYIRVSFSIPREQVEVFCEEF 370 (380)
T ss_pred cCCCCceEEEEeCCCHHHHHHHHHHH
Confidence 2357999999864 3344444443
No 89
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=344.49 Aligned_cols=324 Identities=26% Similarity=0.395 Sum_probs=271.7
Q ss_pred CCeEEcCCCCCCCC--CCHHHHHHHhcC----C-C-CCCCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594 95 EDIVKIDANENPYG--PPPEVREALGQL----K-F-PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (422)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~-~-~~~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al 159 (422)
.+.++|+.+.++.. +.....+++.+. . . ...|.. .|..+||+++++++ | +++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 66789988865442 233444444331 1 1 245644 68999999999987 3 5778999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHH
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE 238 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e 238 (422)
+++++.+++|||+|++++|+|......++..|++++.||.+ +.++|+|.|++.+.+.++|++|++ +.+||||.+++.+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~ 247 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE 247 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence 99999999999999999999999999999999999999987 459999999999987789999998 8899999999999
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
+.++|++. +++||+||.|++|.+++.. +...+..+++++++||||.+. ||+|+||+++++++++.+...+..
T Consensus 248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~ 326 (459)
T COG1167 248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA 326 (459)
T ss_pred HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence 99998875 9999999999999876433 355666799999999999986 999999999999999999876654
Q ss_pred --CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCC--CCc-ccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594 312 --YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVP--FLN-PYPSYSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 312 --~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~--~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.+.+.+.|.++...+.++ .++. +++.++++++.+.+.|+++. ... ..|.+|+|+|+++|++.+..++.+.+
T Consensus 327 ~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a 406 (459)
T COG1167 327 ADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAA 406 (459)
T ss_pred hcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHH
Confidence 678999999999998865 3455 88899999999999999864 223 35788999999999999999999999
Q ss_pred HhCCcEEEe-CCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 AKMGVMIRH-YNNKE----LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~~gI~v~~-~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++||.+.+ +..+. ..+++|++|+...+ +++.+++++|
T Consensus 407 ~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~-e~i~~gi~~l 449 (459)
T COG1167 407 LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSE-EEIEEGIKRL 449 (459)
T ss_pred HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHH
Confidence 999999998 55422 35699999998764 7888888765
No 90
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.9e-42 Score=340.57 Aligned_cols=325 Identities=23% Similarity=0.306 Sum_probs=263.7
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~ 162 (422)
+.++++|+.+.++..+++.+.+++.+ . .....|+++ |..+||+++++++ | ++++ +|++|+|+++++..+
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~ 107 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHL 107 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHH
Confidence 46789999998877777767776654 2 223668655 7899999999986 3 4566 899999999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHH
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
+..++++||+|++++|+|+.+...++..|++++.++.+.+ +.+++.++++++. .++++|++++||||||.+++.+++
T Consensus 108 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~ 186 (395)
T PRK08175 108 MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFF 186 (395)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999988888889999999997544 3457888888763 478999999999999999999888
Q ss_pred HHHHcC----CCeEEEccCCccccCCCch---hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--
Q 014594 241 LKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-- 310 (422)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-- 310 (422)
++|++. |+++|+||+|.++.+++.. ..... ..+++++++||||.||++|+|+||+++++++++.+.+...
T Consensus 187 ~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~ 266 (395)
T PRK08175 187 EKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYH 266 (395)
T ss_pred HHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhhc
Confidence 887754 9999999999998764321 11122 2467889999999999999999999999999999887664
Q ss_pred CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC---CHHHHHHHHH-h
Q 014594 311 PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKLKDDLA-K 384 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~---~~~~~~~~L~-~ 384 (422)
.++.+.+.|.++..+|++ ..+++ +++.++++++.+.+.|+++++....|++|+|+|+++++.. ++.++++.|. +
T Consensus 267 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~ 346 (395)
T PRK08175 267 DYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNE 346 (395)
T ss_pred ccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHh
Confidence 466778889988888875 45677 8899999999999999998743345778999999998643 4788988776 7
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.|.++..+ ..++++||+++. +.+.+.+++++|
T Consensus 347 ~gv~v~p~~~f~~~~~~~lRis~~~--~~~~~~~al~~l 383 (395)
T PRK08175 347 AKVCVSPGIGFGDYGDTHVRFALIE--NRDRIRQAIRGI 383 (395)
T ss_pred CCEEEeCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence 89999998763 235799999984 347889888876
No 91
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4.4e-42 Score=337.30 Aligned_cols=325 Identities=25% Similarity=0.389 Sum_probs=264.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~-~~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++++|+.|.++.+.++.+.+++.+ +. ....|++ .|..++|+++++++ |+ +++ +|++|+|+++++..++.
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 3679999999888777777777665 22 2256865 47899999999873 54 354 79999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
+++++||+|+++.|+|..+...++..|++++.++.++ ++.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus 104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~ 182 (387)
T PRK07777 104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA 182 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999998643 46799999999987 6899999999999999999988888
Q ss_pred HHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~ 311 (422)
+|++. ++++|+||+|.++.+.+. ...... ..+++++++||||.||++|+|+||+++++++++.+..... .
T Consensus 183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~ 262 (387)
T PRK07777 183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT 262 (387)
T ss_pred HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence 87663 999999999998875332 122222 2568999999999999999999999999999998887654 4
Q ss_pred CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014594 312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMG 386 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~g 386 (422)
++.+.+.|.++..++.+ ..|++ .++.++++++.+.+.|+++++....+.+++|+|++++. ..++.++++.|+ ++|
T Consensus 263 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~g 342 (387)
T PRK07777 263 YVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVG 342 (387)
T ss_pred cCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCC
Confidence 66777888888888875 46777 88999999999999999886433345677889999752 347889999997 789
Q ss_pred cEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 387 VMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 387 I~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|.|.++..+ ..++++||+++.+ .+++.+++++|+
T Consensus 343 v~v~pg~~f~~~~~~~~~~~Ri~~~~~--~~~l~~~l~~l~ 381 (387)
T PRK07777 343 VAAIPMSVFYDPADAWNHLVRFAFCKR--DDTLDEAIRRLR 381 (387)
T ss_pred EEEeCchHhCCCCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 999998753 2257999999974 377999988763
No 92
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-42 Score=345.83 Aligned_cols=321 Identities=21% Similarity=0.270 Sum_probs=248.5
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc------C-C-C--CCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~------~-~-~--~~~i~~~~G~~~al~~~~~ 164 (422)
++|+|+.|++++++++.+.++...+. +..||.+ |..++|+++++++ + . . +++|++|+|+++++..++.
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 57999999999999888888665543 2459765 8999999999843 1 1 2 2489999999999999988
Q ss_pred H-----hcCCCCEEEEcCCCchhHHHHHHHcC--CEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
+ +++|||+|+++.|+|+.|...++..| ++++.++. +++|.+|+++++++++ +++|+|+++|||||||.++
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~ 258 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM 258 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence 6 68999999999999999999888765 55666653 3568999999999886 7999999999999999999
Q ss_pred CHHHHHHHHcC------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----HHHH
Q 014594 236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEY 304 (422)
Q Consensus 236 ~~e~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-----~~~~ 304 (422)
+.+++++|++. +++||+||+|.+|.+........ ..+++|+++||||.|+++|||+||++++++ +++.
T Consensus 259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~ 337 (527)
T PRK09275 259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAK 337 (527)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHh
Confidence 99998887642 79999999999987532222111 347899999999999999999999999876 4332
Q ss_pred H--------------------------------HHhcC--CCCCcHHHHHH-----HHHHccC-ChHHH-HHHHHHHHHH
Q 014594 305 L--------------------------------WRAKQ--PYNVSVAAEVA-----ACAALQN-PIYLE-VKEALIKERE 343 (422)
Q Consensus 305 l--------------------------------~~~~~--~~~~~~~~~~a-----a~~~L~~-~~~~~-~~~~~~~~~~ 343 (422)
+ .+... ..+++.+.|.+ +.++|+. ..|.+ +++.++++++
T Consensus 338 l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~ 417 (527)
T PRK09275 338 LPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYK 417 (527)
T ss_pred ccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 2 22222 35677777776 3345654 46777 8999999999
Q ss_pred HHHHHHccCCCCcccCCCceEEEEEeCC----------------CCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEe
Q 014594 344 RLFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSV 405 (422)
Q Consensus 344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~----------------~~~~~~~~~~L~-~~gI~v~~~~~~~-~~~~iRis~ 405 (422)
.+.+.|. ++.....|.+++|+|++++. ..+..+++..|. +.||.+.||..++ .++++|||+
T Consensus 418 ~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~ 496 (527)
T PRK09275 418 ALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL 496 (527)
T ss_pred HHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence 9999984 33222357888999999863 125778888887 7899999998864 367999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014594 406 GKPEHTDALMECLMHL 421 (422)
Q Consensus 406 ~~~~~~~~l~~al~~l 421 (422)
+...+ +.+.++.++|
T Consensus 497 a~~~~-~~~~~~~~rl 511 (527)
T PRK09275 497 ANLNE-EDYAKIGKAI 511 (527)
T ss_pred ecCCH-HHHHHHHHHH
Confidence 86432 5577776665
No 93
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-42 Score=336.10 Aligned_cols=321 Identities=25% Similarity=0.405 Sum_probs=262.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C----CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI 162 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~ 162 (422)
.++++|+.+.+++++++.+.+++.+. . ....| +..|..++|++++++++ +++++|++|+|+++++..+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA 112 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence 46799999988888888888888652 1 13567 55689999999999873 5789999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++.++++||.|+++.|+|..+...++..|++++.++.+++ +++|++++++.++ ++++++++++||||||.+++.+++.
T Consensus 113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (394)
T PRK06836 113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK 191 (394)
T ss_pred HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence 9999999999999999999999998999999999997554 7899999999996 6899999999999999999999998
Q ss_pred HHHc---C-------CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH------
Q 014594 242 KILE---M-------PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------ 304 (422)
Q Consensus 242 ~i~~---~-------~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~------ 304 (422)
+|++ . ++++|+||+|.+|.+++. ........+++++++||||.||+||+|+||+++++++.+.
T Consensus 192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~ 271 (394)
T PRK06836 192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA 271 (394)
T ss_pred HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence 8853 2 689999999999876542 2222334678999999999999999999999998876432
Q ss_pred HHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594 305 LWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 381 (422)
Q Consensus 305 l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~ 381 (422)
+..... .++.+.+.|.++..++++.. .++.++++++.+.+.|+++++....|.+++|+|+++|. .+..++++.
T Consensus 272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~ 347 (394)
T PRK06836 272 LVFANRILGFVNAPALMQRVVAKCLDATV---DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPE-EDDVAFCEK 347 (394)
T ss_pred HHHHhhccccccCCHHHHHHHHHHhCChH---HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCC-CCHHHHHHH
Confidence 211111 24678889999999997642 35567888999999999887433456778999999975 578889988
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 382 LAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 382 L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|.++||.++++..+...+++||+++.+ .+++.+++++|+
T Consensus 348 l~~~gv~v~~g~~f~~~~~iRi~~~~~--~~~~~~~i~~l~ 386 (394)
T PRK06836 348 AKKHNLLLVPGSGFGCPGYFRLSYCVD--TETIERSLPAFE 386 (394)
T ss_pred HHhCCEEEECchhcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 889999999988766678999999853 477888887763
No 94
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-42 Score=312.12 Aligned_cols=325 Identities=21% Similarity=0.305 Sum_probs=276.7
Q ss_pred CCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHH
Q 014594 95 EDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID 160 (422)
Q Consensus 95 ~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~ 160 (422)
.++|.|+.|++. +.+.+++.+|+.+ +. ..++| |..|....|+++|+++ .+++++|++|+|..+|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 478999999864 4567888888876 32 23778 7779999999999995 257889999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
+++.++.+||..|+++.|+|+.|...+...|.++..++ .+.+|.+|++.+|+.+. ++|.+++++||+||+|.+++.+
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence 99999999999999999999999999999999999998 46789999999999998 7999999999999999999999
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecC--------HHHHH
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE 303 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--------~~~~~ 303 (422)
-|++|++. ++.+|.||+|.++.+++.. +..+...--+++++|+||.|-.||||+||++.. ..+++
T Consensus 220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q 299 (447)
T KOG0259|consen 220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ 299 (447)
T ss_pred HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence 99998874 9999999999999876543 233333445799999999999999999999972 34445
Q ss_pred HHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeC-----CC
Q 014594 304 YLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVT-----SG 372 (422)
Q Consensus 304 ~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~-----~~ 372 (422)
.+.+..+ ..+++++.|.|.-..|+. +++.+ ....++.+.+...+.|++++.+. +.|++.+|+|+++. +-
T Consensus 300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~ 379 (447)
T KOG0259|consen 300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDI 379 (447)
T ss_pred HHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccc
Confidence 5555444 357788999999999986 47778 88999999999999999999876 47899999998764 34
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 373 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 373 ~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.|..+|++.|. |..+.+.||..++.++|+||+++.+++ .+++|+.||+
T Consensus 380 ~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~--~leea~~Rik 428 (447)
T KOG0259|consen 380 EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEE--MLEEAFSRIK 428 (447)
T ss_pred cccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChH--HHHHHHHHHH
Confidence 57788999997 889999999999999999999998874 4899988874
No 95
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3e-43 Score=343.01 Aligned_cols=324 Identities=31% Similarity=0.526 Sum_probs=273.1
Q ss_pred CeEEcCCCCCCCC----CCHHHHHHHhc----CCCCCCCCCc-chHHHHHHHHHHcC------CCCC-CEEEeCCHHHHH
Q 014594 96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI 159 (422)
Q Consensus 96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~y~~~-~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al 159 (422)
++|+|+.|+++.. ++++..+++.+ ......|+++ |..+||++++++++ ++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999999987 55666666543 2334778665 69999999999997 7788 999999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCcc
Q 014594 160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD 231 (422)
Q Consensus 160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPt 231 (422)
..++..+ .++||+|+++.|+|+.|...++..|++++.++. +.++++|++++++.+++. +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999988 789999999999999999999999999999994 477899999999999742 57899999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch----hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
|.+++.+++++|++. ++++|+||+|.++.++... ...+....++++++||||.||++|+|+||+++++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE 241 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence 999999999999543 9999999999999876432 34455566799999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594 304 YLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~ 378 (422)
.+......+..+.+.+.++.+++.+.. +++ ++++++++++.+.+.|++.++....+..++|+|+.++.. ++.++
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 320 (363)
T PF00155_consen 242 RLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPN-DAEEL 320 (363)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-HHHHH
T ss_pred hhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccc-hHHHH
Confidence 999888887779999999999998764 667 999999999999999998864444566888999998633 67899
Q ss_pred HHHHHhC-CcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~~~-gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.|.++ ||.+.++..+..++++||+++..+ .+++++++++|
T Consensus 321 ~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~-~e~~~~~~~~l 363 (363)
T PF00155_consen 321 AQELLEEYGILVRPGSYFGVPGYIRISLASHS-EEDLEEALERL 363 (363)
T ss_dssp HHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSC-HHHHHHHHHHH
T ss_pred HHHHHHhCCEEEEecCCCCCCCEEEEEeccCC-HHHHHHHHhhC
Confidence 9999976 999999888766999999994332 36677777765
No 96
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.1e-41 Score=357.42 Aligned_cols=327 Identities=16% Similarity=0.245 Sum_probs=254.3
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcc-hHHHHHHHHHHcCCCCC---CEEEeCCHHHHHHHHHHHh
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPE-SRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV 166 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y~~~~-~~~lr~~la~~~~~~~~---~i~~~~G~~~al~~~~~~l 166 (422)
.+.++|+|+.|+|++++|+.+++++.+ +... ..++.+. ...+++.+++.+|++.+ +|++|+|+++++..+++++
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL 774 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC 774 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 356899999999999999999999876 3221 2122222 45677777777787554 8999999999999999999
Q ss_pred cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCC-CccCcCCCHHHHHHH
Q 014594 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI 243 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~-NPtG~~~~~e~l~~i 243 (422)
+++||.|+++.|+|+.|...++..|++++.+|.+ ++|.+|++.+++++++.+.++|+++||| ||||.+++.+++++|
T Consensus 775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L 854 (1082)
T PLN02672 775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI 854 (1082)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence 9999999999999999999999999999999964 4788999999999863345689999997 999999999999999
Q ss_pred HcC----CCeEEEccCCccccCCCch------hhhh---hc---CCcEEEEccChhhhccccccceeeecCH-HHHHHHH
Q 014594 244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW 306 (422)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~------~~~~---~~---~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~ 306 (422)
++. +++||+||+|.++.+++.. .... .. ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus 855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~ 934 (1082)
T PLN02672 855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH 934 (1082)
T ss_pred HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence 864 8999999999987764321 1111 11 1379999999999999999999999964 5888887
Q ss_pred HhcCC---CCCcHHHHHHHHHHcc--CChH---HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC------
Q 014594 307 RAKQP---YNVSVAAEVAACAALQ--NPIY---LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS------ 371 (422)
Q Consensus 307 ~~~~~---~~~~~~~~~aa~~~L~--~~~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~------ 371 (422)
..... ++.+..++.++.+++. ++.| +. .++.++++++++.+.|+++++....|.+++|+|++++.
T Consensus 935 ~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~ 1014 (1082)
T PLN02672 935 SAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTV 1014 (1082)
T ss_pred HhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccc
Confidence 65332 3333444444444443 3444 33 67779999999999999987543456678888987531
Q ss_pred -----------CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 -----------GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 -----------~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.++.++++.|++ .||.+.+|..++.++|+||+++.++ +++.+++++|
T Consensus 1015 ~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~--e~LeeALerL 1074 (1082)
T PLN02672 1015 KLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALED--SEFDRALKAI 1074 (1082)
T ss_pred cccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 2467899999985 5999999977677899999999754 5677777765
No 97
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.2e-40 Score=335.47 Aligned_cols=323 Identities=17% Similarity=0.290 Sum_probs=247.0
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCC-----CCCCCC-CcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~y~-~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~ 163 (422)
++|+|..+.+.|+. ..+.++...+. ....|+ ..|..+||+++++++ | +++++|++|+|+++++..++
T Consensus 130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~ 208 (534)
T PLN02231 130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 208 (534)
T ss_pred ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence 56777665555653 33333332221 125584 458999999999986 3 57899999999999999999
Q ss_pred HHhcC-CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCC
Q 014594 164 RCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 164 ~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~ 235 (422)
+.++. +||.|+++.|+|+.|...++..|++++.++++ ++|++|+++|++.+++ .++|+++++|||||||.++
T Consensus 209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl 288 (534)
T PLN02231 209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL 288 (534)
T ss_pred HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence 99884 79999999999999999999999999999965 3589999999998863 1689999999999999999
Q ss_pred CHHHHHHHHcC----CCeEEEccCCccccCC-C-ch--hhhhh-------cCCcEEEEccChhhh-ccccccceeeec--
Q 014594 236 NDEDLLKILEM----PILVVLDEAYTEFSGL-E-SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF-- 297 (422)
Q Consensus 236 ~~e~l~~i~~~----~~~li~Deay~~~~~~-~-~~--~~~~~-------~~~~~i~~~S~SK~~-~~~G~r~G~i~~-- 297 (422)
+.+++++|++. +++||+||+|.++.++ + .. ...+. ...++++++||||.+ |++|+|+||+++
T Consensus 289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~ 368 (534)
T PLN02231 289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 368 (534)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence 99999999875 9999999999998873 2 11 11111 123689999999975 899999999986
Q ss_pred -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC-----hH------HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCc
Q 014594 298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP-----IY------LE-VKEALIKERERLFKLLKDVPFLNP-YPSYS 362 (422)
Q Consensus 298 -~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~-----~~------~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~ 362 (422)
++++++.+.+.... .+.+.+.|.++..+++.+ .+ .+ +++.++++++.+.+.|++++++.+ .|.++
T Consensus 369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Gg 448 (534)
T PLN02231 369 FTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGA 448 (534)
T ss_pred CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence 68899988766543 455778888888888642 22 22 467899999999999999855554 57788
Q ss_pred eEEEEEe--CCC----------CCHHHHHHHHH-hCCcEEEeCCCCCC---CCeEEEEecChhhHHHHHHHHhhh
Q 014594 363 NFILCEV--TSG----------MDAKKLKDDLA-KMGVMIRHYNNKEL---KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~--~~~----------~~~~~~~~~L~-~~gI~v~~~~~~~~---~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+|+|+++ |.. .+...++..|+ +.||.+.||..++. ..++|+++..++ +++.+++++|
T Consensus 449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~--e~l~eal~RL 521 (534)
T PLN02231 449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAIVSRL 521 (534)
T ss_pred eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence 9999554 421 12334556666 78999999988542 457999997654 6688888776
No 98
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.9e-41 Score=330.42 Aligned_cols=302 Identities=17% Similarity=0.268 Sum_probs=241.4
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCC--------C----------------------CCCHHHHHHH
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREAL 117 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~al 117 (422)
++++.++..+ ....+...+.+....+.++|+|+.|+++ + .+++.+.+++
T Consensus 12 ~~~~~~~~~~-~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~ 90 (407)
T PLN02368 12 NENVKKCQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK 90 (407)
T ss_pred CHHHHhhhhh-cCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence 4555555554 2344566666666666789999999985 3 1445555555
Q ss_pred hcC---C-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHH
Q 014594 118 GQL---K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEF 185 (422)
Q Consensus 118 ~~~---~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~ 185 (422)
..+ . ....|++. |..+||+++++++ | +++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|..
T Consensus 91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~ 170 (407)
T PLN02368 91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA 170 (407)
T ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence 443 1 23568655 7899999999987 5 578899999999999999999887 799999999999999999
Q ss_pred HHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEcc
Q 014594 186 DAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254 (422)
Q Consensus 186 ~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~De 254 (422)
.++..|++++.++.+ ++|++|++.+++.+++ .++|+++++|||||||.+++.+++++|++. +++||+||
T Consensus 171 ~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE 250 (407)
T PLN02368 171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE 250 (407)
T ss_pred HHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 999999999999864 4589999999999863 168999999999999999999999999874 99999999
Q ss_pred CCccccCCC--ch---hhhh---h----cCCcEEEEccChhhh-ccccccceeee---cCHHHHHHHHHhc-CCCCCcHH
Q 014594 255 AYTEFSGLE--SR---MEWV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSVA 317 (422)
Q Consensus 255 ay~~~~~~~--~~---~~~~---~----~~~~~i~~~S~SK~~-~~~G~r~G~i~---~~~~~~~~l~~~~-~~~~~~~~ 317 (422)
+|.++.+++ .. .... . ..+++|+++||||.| +++|||+||++ +++++++.+.+.. ..++++.+
T Consensus 251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~ 330 (407)
T PLN02368 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVS 330 (407)
T ss_pred cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcH
Confidence 999988643 11 1111 1 245899999999998 89999999999 4889999988874 35788999
Q ss_pred HHHHHHHHccCC--------hHH---H-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeC
Q 014594 318 AEVAACAALQNP--------IYL---E-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVT 370 (422)
Q Consensus 318 ~~~aa~~~L~~~--------~~~---~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~ 370 (422)
+|.++.++|+++ .|. + +++.++++|+.+.+.|++++++. ..|++++|+|++++
T Consensus 331 ~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 331 GQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 999999999753 233 2 57889999999999999986554 56888999997764
No 99
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.9e-41 Score=332.47 Aligned_cols=321 Identities=18% Similarity=0.216 Sum_probs=243.9
Q ss_pred CCeEEcCCCCCCCCCC--HHHHHHHhc-CC------CCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 95 EDIVKIDANENPYGPP--PEVREALGQ-LK------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~--~~v~~al~~-~~------~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
.++|+|+.+.++..++ +.+.+++.+ +. ....|+++ |..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 4679999988765443 345555544 21 12468765 7899999999997 4788999999999999
Q ss_pred HHHHHHHhcC-----CCCEEEE-cCCCchhHHHHHHHcCC------EEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 159 l~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g~------~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+.++++++++ +||.|++ +.|+|+.|...+...|. .++.++.+. ++++|+++++ +. .++++++++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~ 186 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS 186 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence 9999999985 5899999 79999999876654332 222232211 3689999997 33 678999999
Q ss_pred CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhh-hcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 226 ~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
|||||||.+++.+++++|++. +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus 187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE 265 (416)
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence 999999999999999998764 99999999998653221111111 125789999999995 899999999999999
Q ss_pred HHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHccC-CC--Cc-ccCCCceEEEEEe
Q 014594 301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKDV-PF--LN-PYPSYSNFILCEV 369 (422)
Q Consensus 301 ~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~~-~~--~~-~~p~~~~f~~~~~ 369 (422)
+++.+...... ++++.+.|.++..+|++++|.. +++.++++++.+.+.|++. +. .. ..|++|+|+|+++
T Consensus 266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~ 345 (416)
T PRK09440 266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF 345 (416)
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence 99999877654 4678999999999999876643 4556778888888888653 21 23 3577899999999
Q ss_pred CC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 370 TS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 370 ~~-~~~~~~~~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++ +.++.++.+.|.++||.++++..+ + ..+++||+++.. .+++.+++++|
T Consensus 346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~--~~~l~~~i~~l 405 (416)
T PRK09440 346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD--DEEIEKGIAIL 405 (416)
T ss_pred CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC--HHHHHHHHHHH
Confidence 86 467889999999999999998653 1 135999999753 25566666655
No 100
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=328.08 Aligned_cols=313 Identities=18% Similarity=0.213 Sum_probs=241.9
Q ss_pred CCeEEcCCCCC-CCCCCH----HHHHHHhcC---CCCCCCC-CcchHHHHHHHHHHc---C---CCCCCEE--EeCCHHH
Q 014594 95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIYP-DPESRRLRAALAKDS---G---LESDHIL--VGCGADE 157 (422)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~y~-~~~~~~lr~~la~~~---~---~~~~~i~--~~~G~~~ 157 (422)
.++++|+.|.+ ++.+++ .+.+++.+. .....|+ ..|..+||+++++++ + +++++|+ .|.|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 56799999985 344433 344454332 1226684 458999999999986 2 4778898 5899999
Q ss_pred HHHHHHH---HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-C-CCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594 158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (422)
Q Consensus 158 al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP 230 (422)
++..++. .++++||+|++++|+|+.|...++..|++++.++. + +++++|++.+++.+.+ ++++++++++||||
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP 188 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP 188 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9988875 56899999999999999999999999999999997 2 4589999999999853 34677778999999
Q ss_pred cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhh-hhcCCcEEEEccChhhhccccccceee---ec
Q 014594 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF 297 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~i---~~ 297 (422)
||.+++.+++++|++. ++++|+||+|.+|.+++ . .... ....+++++++||||.|+++|+|+||+ ++
T Consensus 189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~ 268 (404)
T PTZ00376 189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence 9999999999998764 99999999999998753 1 1222 223468999999999999999999998 57
Q ss_pred CHHHHHHH----HHh-cCCC-CCcHHHHHHHHHHccCCh----H---HH-HHHHHHHHHHHHHHHHccCCC---C-cccC
Q 014594 298 PLSIIEYL----WRA-KQPY-NVSVAAEVAACAALQNPI----Y---LE-VKEALIKERERLFKLLKDVPF---L-NPYP 359 (422)
Q Consensus 298 ~~~~~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~~~~~~l~~~L~~~~~---~-~~~p 359 (422)
++++++.+ .+. ...+ +.+.+.|.++..+|++++ | ++ .+++++++|+.+.+.|++++. . ...|
T Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p 348 (404)
T PTZ00376 269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN 348 (404)
T ss_pred CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc
Confidence 88765544 332 2334 457889999999998853 3 23 567889999999999998742 2 2357
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 360 SYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 360 ~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
.+|+|+|++++ .+++++|. ++||.+.++. ||+++ ..++++.+.++|+.
T Consensus 349 ~gg~f~~~~~~-----~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~ 399 (404)
T PTZ00376 349 QIGMFSFTGLT-----KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHD 399 (404)
T ss_pred CceEEEecCCC-----HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHH
Confidence 88999999873 47788888 5599998872 99998 66666666666654
No 101
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.2e-40 Score=324.09 Aligned_cols=314 Identities=19% Similarity=0.195 Sum_probs=239.4
Q ss_pred CCeEEcCCCC---CCCCCC--HHHHHHHhcCC---CCCCCC-CcchHHHHHHHHHHc---C---CCCCCE--EEeCCHHH
Q 014594 95 EDIVKIDANE---NPYGPP--PEVREALGQLK---FPYIYP-DPESRRLRAALAKDS---G---LESDHI--LVGCGADE 157 (422)
Q Consensus 95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~~---~~~~y~-~~~~~~lr~~la~~~---~---~~~~~i--~~~~G~~~ 157 (422)
.++|+|+.|. +++..+ +.+.+++.+.. ....|+ ..|..+||+++++++ + +++++| ++|+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 4679999995 333333 67888877632 224684 458999999999996 2 367887 99999999
Q ss_pred HHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCcc
Q 014594 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD 231 (422)
Q Consensus 158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPt 231 (422)
++.++++.+ ++|||+|++++|+|+.|...++..|++++.++. ++++++|++.+++.+.+ .+++++++++|||||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT 185 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT 185 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998766 589999999999999999999999999999996 35689999999998863 234566668999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCC-Cc---hhhhh-hcCCcEEEEccChhhhccccccceeeec---CH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGL-ES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL 299 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~-~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~ 299 (422)
|.+++.+++++|++. ++++|+||+|.+|.++ .. ....+ ...+++++++||||.|+++|+|+||+++ ++
T Consensus 186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~ 265 (396)
T PRK09257 186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence 999999999999874 8999999999998864 11 11222 2356899999999999999999999973 44
Q ss_pred HH----HHHHHHhc-CC-CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCCC---Cc-ccCCC
Q 014594 300 SI----IEYLWRAK-QP-YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVPF---LN-PYPSY 361 (422)
Q Consensus 300 ~~----~~~l~~~~-~~-~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~ 361 (422)
+. ++.+.... .. ++++.+.|.++..+|+++ ++++ +++.++++++.+.+.|++++. .. ..|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g 345 (396)
T PRK09257 266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQR 345 (396)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc
Confidence 43 33343332 23 456889999999999875 2344 788999999999999998741 33 35789
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|+|+|++++ .+.+.+.+.++||.+.+. + ||+++... .+.+.+++++|
T Consensus 346 g~~~w~~l~----~~~~~~l~~~~~V~~~p~------~--ri~~~~~~-~~~i~~~~~~i 392 (396)
T PRK09257 346 GMFSYSGLT----PEQVDRLREEFGVYAVGS------G--RINVAGLN-ESNIDYVAEAI 392 (396)
T ss_pred eEEEecCCC----HHHHHHHHHcCCEEEcCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence 999999884 344444445889998773 2 99997422 25566666655
No 102
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.2e-40 Score=326.93 Aligned_cols=321 Identities=19% Similarity=0.250 Sum_probs=236.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHH-HHc----C---CCCC--CEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la-~~~----~---~~~~--~i~~~~G~~~al~~~~~ 164 (422)
++|+++.+++.+++++.+.+...... +..||.+ +..+++++++ +++ + .+++ +|++|+|+++++..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 46899999999987655544333332 2457544 5666666666 443 1 2333 89999999999999988
Q ss_pred H-----hcCCCCEEEEcCCCchhHHHHHHHc--CCEEEEecCC--CC-----CCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRK--SD-----FSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~--~~-----~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
+ +++|||+|+++.|+|+.|...++.. |++++.++.+ .+ |.+|+++++++++ +++|+|+++|||||
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP 252 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP 252 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence 7 7899999999999999999887775 7788888753 22 8899999999876 79999999999999
Q ss_pred cCcCCCHHHHHHHHcC------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH----
Q 014594 231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---- 300 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~---- 300 (422)
||.+++.+++++|++. +++||+||+|.+|.+....+... ..+++++++||||.||++|||+||++++++
T Consensus 253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d 331 (521)
T TIGR03801 253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFD 331 (521)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHH
Confidence 9999999999888542 79999999999987532222111 346899999999999999999999999865
Q ss_pred -HHH--------HH------------------------HHhc--CCCCCcHHHHH-----HHHHHccC-ChHHH-HHHHH
Q 014594 301 -IIE--------YL------------------------WRAK--QPYNVSVAAEV-----AACAALQN-PIYLE-VKEAL 338 (422)
Q Consensus 301 -~~~--------~l------------------------~~~~--~~~~~~~~~~~-----aa~~~L~~-~~~~~-~~~~~ 338 (422)
+++ .+ ++.. ...+++.+.|. ++.++++. ..|.+ +++.+
T Consensus 332 ~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~ 411 (521)
T TIGR03801 332 KLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDIC 411 (521)
T ss_pred HHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 221 11 1111 12455666665 34455554 46777 88999
Q ss_pred HHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-C---------------CCHHHHHHHHH-hCCcEEEeCCCCCC-CCe
Q 014594 339 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-G---------------MDAKKLKDDLA-KMGVMIRHYNNKEL-KGY 400 (422)
Q Consensus 339 ~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~---------------~~~~~~~~~L~-~~gI~v~~~~~~~~-~~~ 400 (422)
+++++.+.+.| .++.....|.+++|+|++++. . .+..+++..|. +.||.+.||..++. +++
T Consensus 412 ~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~ 490 (521)
T TIGR03801 412 RRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWS 490 (521)
T ss_pred HHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCe
Confidence 99999999999 333222346778999999973 1 15677888887 78999999988543 568
Q ss_pred EEEEecChhhHHHHHHHHhhh
Q 014594 401 VRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 401 iRis~~~~~~~~~l~~al~~l 421 (422)
+|||++...+ +.+.++.++|
T Consensus 491 vRisla~l~~-~~~~~~~~rl 510 (521)
T TIGR03801 491 VRVSLANLNE-YDYAEIGRAI 510 (521)
T ss_pred EEEEecCCCH-HHHHHHHHHH
Confidence 9999985332 4455555554
No 103
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.3e-39 Score=320.36 Aligned_cols=313 Identities=17% Similarity=0.231 Sum_probs=227.6
Q ss_pred CCCeEEcCCCC-CCCCCC----HHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHc-CCC-----CCCE-----EEeC
Q 014594 94 PEDIVKIDANE-NPYGPP----PEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHI-----LVGC 153 (422)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~----~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~-~~~-----~~~i-----~~~~ 153 (422)
....++++.+. ++...+ +.+.++...+ . ....| |..|..+||+++++++ +.. +++| +.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 34568888875 333233 3455554332 2 22468 4558999999999987 221 2233 3344
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCC
Q 014594 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN 229 (422)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~N 229 (422)
|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.++. ++++++|++.+++.+.+ .+++++++++|||
T Consensus 127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 4443 33333345579999999999999999999999999999986 34589999999888752 4678888899999
Q ss_pred ccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCCcEEEEccChhhhccccccceeee--c
Q 014594 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F 297 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~--~ 297 (422)
|||.+++.+++++|++. ++++|+||+|.+|.+++ . ..... ...+++|+++||||.|+++|||+||++ +
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence 99999999999998864 99999999999998743 1 22222 234579999999999999999999985 3
Q ss_pred -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHccCC----hH---HH-HHHHHHHHHHHHHHHHccCC----CCccc
Q 014594 298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LE-VKEALIKERERLFKLLKDVP----FLNPY 358 (422)
Q Consensus 298 -~~~~~~----~l~~~~~~--~~~~~~~~~aa~~~L~~~----~~---~~-~~~~~~~~~~~l~~~L~~~~----~~~~~ 358 (422)
++++++ .+...... ++++.+.|.++..+|+++ .| ++ +++.++++|+.+.+.|++++ +..+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~ 365 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT 365 (423)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Confidence 566554 33343332 457788999999999875 33 44 77899999999999999986 33456
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 359 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 359 p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|++|+|+|++++ +++++.|+ ++||.+.++ + ||+++..+ .+.+.+++++|
T Consensus 366 p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~-~~~i~~~~~~i 415 (423)
T PLN02397 366 KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRD------G--RISMAGLS-SKNVPYLADAI 415 (423)
T ss_pred CCceEEEecCCC-----HHHHHHHHHhCCEEECCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence 899999999883 45888886 789999732 2 99997322 14455555554
No 104
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=315.81 Aligned_cols=305 Identities=21% Similarity=0.276 Sum_probs=234.8
Q ss_pred HHHHHHHhcC--CCCCCCCC-cchHHHHHHHHHHc-----CCCC---CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 111 PEVREALGQL--KFPYIYPD-PESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 111 ~~v~~al~~~--~~~~~y~~-~~~~~lr~~la~~~-----~~~~---~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
+.+.+++.+. .....|++ .|..+||+++++++ ...+ ++|++|+|+++++.+++.+++++||.|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~ 102 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN 102 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4455555542 23367855 48899999999876 2332 578999999999999999999999999999999
Q ss_pred chhHHHHHH-HcCCEEEEecCC-CCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHHHHHHHHc---------
Q 014594 180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE--------- 245 (422)
Q Consensus 180 y~~~~~~~~-~~g~~~~~v~~~-~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~--------- 245 (422)
|+.|...+. ..|++++.++.. +++++|++++++.++ ++..++++++|||||||.+++.+++++|++
T Consensus 103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~ 182 (388)
T PRK08637 103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG 182 (388)
T ss_pred CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999988654 589999999973 556899999999875 234556777899999999999999999875
Q ss_pred CCCeEEEccCCccccCCCch----hhh-hhcCCcE--EEEccChhhhccccccceeeecC------HHHHHHHHHh----
Q 014594 246 MPILVVLDEAYTEFSGLESR----MEW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRA---- 308 (422)
Q Consensus 246 ~~~~li~Deay~~~~~~~~~----~~~-~~~~~~~--i~~~S~SK~~~~~G~r~G~i~~~------~~~~~~l~~~---- 308 (422)
.+++||+||+|.+|.+++.. ... .+..+++ ++++||||.|+++|+|+||++++ +++++.+.+.
T Consensus 183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~ 262 (388)
T PRK08637 183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL 262 (388)
T ss_pred CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence 38999999999999765421 112 2344575 45579999999999999999854 6777777542
Q ss_pred -c-CCCCCcHHHHHHHHHHccCChHHH----HHHHHHHHHHHHHHHHccCC---CCc-ccCCCceEEEEEeCCCCCHHHH
Q 014594 309 -K-QPYNVSVAAEVAACAALQNPIYLE----VKEALIKERERLFKLLKDVP---FLN-PYPSYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 309 -~-~~~~~~~~~~~aa~~~L~~~~~~~----~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~f~~~~~~~~~~~~~~ 378 (422)
. ..+++|.+.|.++..+|+++.|.. .+..++++++.+.+.|++.+ .+. ..|++|+|+|++++ +.+++++
T Consensus 263 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~~~~~~l 341 (388)
T PRK08637 263 IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-GVDAEEL 341 (388)
T ss_pred hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC-hHHHHHH
Confidence 1 235789999999999999877654 44568888888888887652 233 34567899999997 4567889
Q ss_pred HHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.|. ++||.+.+.. ++++||+++... .+++.+++++|
T Consensus 342 ~~~l~~~~gv~~~~~~----~~~iRi~~~~~~-~~~i~~~~~~l 380 (388)
T PRK08637 342 RVHLLEKYGIGTIALN----ETDLRIAFSCVE-EEDIPELFDSI 380 (388)
T ss_pred HHHHhhhcceEEEecc----CCceEEEeecCC-HHHHHHHHHHH
Confidence 99986 7899988542 679999998744 36677777765
No 105
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=290.89 Aligned_cols=298 Identities=20% Similarity=0.282 Sum_probs=247.7
Q ss_pred CCCCCc-chHHHHHHHHHHc--------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCE
Q 014594 124 YIYPDP-ESRRLRAALAKDS--------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAA 193 (422)
Q Consensus 124 ~~y~~~-~~~~lr~~la~~~--------~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~ 193 (422)
..|++. |..++|+++|+++ ..+|+++++++|++.+++.++.+|++|||.-+++.|.|+++..-++. .|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 346555 8899999999997 25899999999999999999999999999999999999999877765 7999
Q ss_pred EEEecC--CCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCC
Q 014594 194 VVKVPR--KSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL 262 (422)
Q Consensus 194 ~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~ 262 (422)
+++|.. .++|.++.+++|+++.+ .++|.++++||+||.|.++++|++..++++ ++.+|+||+|+.-+++
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~ 274 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD 274 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence 999884 57789999999998854 478999999999999999999999999986 9999999999986655
Q ss_pred Cch----hhh---hh-cCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHH-
Q 014594 263 ESR----MEW---VK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL- 332 (422)
Q Consensus 263 ~~~----~~~---~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~- 332 (422)
.+. +.. .. ..+++.++.|+||.+|+||+|+|.+.. +++++....+....+.+|+..|..+...|.|.+|.
T Consensus 275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~ 354 (471)
T KOG0256|consen 275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR 354 (471)
T ss_pred ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence 421 111 11 457889999999999999999999997 56778888888888889999999999999996544
Q ss_pred ---H-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCC--CCCCC
Q 014594 333 ---E-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNN--KELKG 399 (422)
Q Consensus 333 ---~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~--~~~~~ 399 (422)
. ..++++.+.+++.+.|++++.-......|.|+|+++..-. ..-++.+.+.++ ++.+.||.. ...+|
T Consensus 355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpG 434 (471)
T KOG0256|consen 355 EYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPG 434 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCC
Confidence 4 7789999999999999998754456678899999986311 234667777755 999999998 45689
Q ss_pred eEEEEecChhhHHHHHHHHhhhC
Q 014594 400 YVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 400 ~iRis~~~~~~~~~l~~al~~l~ 422 (422)
|+|++|+...+ +.+.-|++|++
T Consensus 435 WFRvcFAn~~~-~t~~~am~Ri~ 456 (471)
T KOG0256|consen 435 WFRVCFANMSE-ETLEVAMRRLK 456 (471)
T ss_pred eEEEEeccCCH-HHHHHHHHHHH
Confidence 99999997653 44554888763
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=9.2e-34 Score=274.27 Aligned_cols=321 Identities=35% Similarity=0.517 Sum_probs=259.5
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc--C-CCCCCC-CCcchHHHHHHHHHHcCCC------CCCEEEeCCHHHHHHHHHHHhc
Q 014594 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~y-~~~~~~~lr~~la~~~~~~------~~~i~~~~G~~~al~~~~~~l~ 167 (422)
++|+.|.+++.+++.+.+++.+ . .....| +..+..+++++++++++.. ++++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 4788999999998888877653 2 222445 4457899999999998644 6789999999999999999999
Q ss_pred CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH--HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH---
Q 014594 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK--- 242 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~--- 242 (422)
++||+|+++.|+|..+...++..|.+++.++.+++...+. +.++.... +++++|++++|+||||.+++.+++.+
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~ 159 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE 159 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999766656654 56666554 78999999999999999999999985
Q ss_pred HHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC--CCCc
Q 014594 243 ILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS 315 (422)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~--~~~~ 315 (422)
+++. |+++|+|++|..+...+... ......+.+++++|++|.++++|.|+||+++++ ++.+.+...... ++.+
T Consensus 160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T cd00609 160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS 239 (350)
T ss_pred HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence 5544 99999999999876543322 233456778999999999988999999999998 788888776655 6788
Q ss_pred HHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014594 316 VAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 392 (422)
Q Consensus 316 ~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~ 392 (422)
...+.++..+|+.. ++.+ .+++++++++++.+.|+++++.. ..+..++|+|++++...+.+.+.+.|.++||.+.++
T Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~ 319 (350)
T cd00609 240 TLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPG 319 (350)
T ss_pred hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecc
Confidence 89999999999886 5666 88899999999999999987655 467788999999975545666777777889999987
Q ss_pred CCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 393 NNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 393 ~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..+. .+.++||+++.. .+++..+++.|
T Consensus 320 ~~~~~~~~~~iRi~~~~~--~~~i~~~~~al 348 (350)
T cd00609 320 SAFGEGGEGFVRLSFATP--EEELEEALERL 348 (350)
T ss_pred cccccCCCCeEEEEeeCC--HHHHHHHHHHh
Confidence 6543 678999999885 24455555544
No 107
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=4.1e-32 Score=260.80 Aligned_cols=293 Identities=16% Similarity=0.188 Sum_probs=222.3
Q ss_pred CCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc---CCCchh
Q 014594 107 YGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTFTM 182 (422)
Q Consensus 107 ~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~---~p~y~~ 182 (422)
+..+|.+.++..+. .. ++-+..-..+|++++|+++|++++++++++|+++++..++.+++++||.|+++ .|+|..
T Consensus 32 l~~~~~~~~~~~~~~~~-~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s 110 (346)
T TIGR03576 32 LAGGFKIDEEDLELLET-YVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPS 110 (346)
T ss_pred CCCChhHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchh
Confidence 34567777776552 11 11011236789999999999999999999999999999999999999999874 579999
Q ss_pred HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcc
Q 014594 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE 258 (422)
Q Consensus 183 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~ 258 (422)
|...++..|++++.+ .|++.++. . +++++|+++ ++||+|.+++.+++.+|++. ++++|+||+|..
T Consensus 111 ~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~ 179 (346)
T TIGR03576 111 IPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA 179 (346)
T ss_pred HHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999987543 24555432 2 467888875 46999999888888777653 999999999998
Q ss_pred ccCC---CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH
Q 014594 259 FSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE 333 (422)
Q Consensus 259 ~~~~---~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~ 333 (422)
+..+ ..... ..+..+++.|||| +++|+|+||+++++++++.+.+...++. .+++.+.++.++|+......
T Consensus 180 ~~~~~~~~~~~~---~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~ 254 (346)
T TIGR03576 180 RVRRLYGQPPAL---DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSR 254 (346)
T ss_pred cccccCCCCCHH---HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHH
Confidence 6522 11111 1123477889999 5789999999999999999998887754 68889999999997643222
Q ss_pred HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH-HHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecChh--
Q 014594 334 VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA-KKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKPE-- 409 (422)
Q Consensus 334 ~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~-~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~~-- 409 (422)
+++.++++++.+.+.++++ .+.++.++|+|++++. .++ +.+.+.|.++||.++++..+ +.++|+||++++++
T Consensus 255 ~~~~l~~r~~~~~~~l~~~---~~~~~~~~f~~~~~~~-~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~ 330 (346)
T TIGR03576 255 IRDAFKRKEEVYLRLFDKL---NVERTPTGFVIKGVEE-EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAE 330 (346)
T ss_pred HHHHHHHHHHHHHHHHHhC---CCCcCCCeEEEEeCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHH
Confidence 7778888888888888754 3456778899999963 233 44445556899999998764 45789999999888
Q ss_pred --hHHHHHHHHhh
Q 014594 410 --HTDALMECLMH 420 (422)
Q Consensus 410 --~~~~l~~al~~ 420 (422)
+++.+.++++.
T Consensus 331 ~~~~~~~~~al~~ 343 (346)
T TIGR03576 331 RIGDDYLVEAVKD 343 (346)
T ss_pred hcCHHHHHHHHHh
Confidence 58999998875
No 108
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=5.8e-32 Score=263.08 Aligned_cols=317 Identities=21% Similarity=0.221 Sum_probs=238.4
Q ss_pred CCCCeEEcCCCCCCCC--CCHHHHHHHhc-CC-CCCC-------CCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~~-------y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
.+.++|||+.| ++++ .+|++++++.+ +. ++.. ++. +...+++++++++++. +++|++++|+++.+
T Consensus 14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~- 90 (360)
T TIGR00858 14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV- 90 (360)
T ss_pred CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence 46779999998 4554 55889888876 22 1111 122 2356799999999984 57888888865555
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (422)
.++.+++++||+|+++.|+|..+...++..|++++.++ .+|++.+++.+++ .++++|++++++||||...+.
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~ 165 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYR-----HNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL 165 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEec-----CCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence 56677889999999999999999888888999998877 3688999998864 257888888999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCCCc---hhhh--hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
++|.++++. |+++|+||+|..+..+.. .... +...+++++++||||.++++| ||+++++++++.+......
T Consensus 166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~ 242 (360)
T TIGR00858 166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART 242 (360)
T ss_pred HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence 999999997 999999999987543221 1222 123467899999999998766 9999999999888655443
Q ss_pred C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
+ +.++..+.++.++++.....+ .+++++++++++.+.|++++ +.+.++.++|+|+.++...++.++.+.|+++|
T Consensus 243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 321 (360)
T TIGR00858 243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FTLMPSCTPIVPVIIGDNASALALAEELQQQG 321 (360)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-CccCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2 345555666667775433334 78899999999999999886 44557788999999875456788999999999
Q ss_pred cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.+.++..+ ...+++||+++...+.+++.+++++|
T Consensus 322 I~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 322 IFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred eeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 999875442 23569999998422235566666554
No 109
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=5.7e-33 Score=267.40 Aligned_cols=305 Identities=16% Similarity=0.156 Sum_probs=224.3
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 97 IVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
+|||++|+||. ++|.+++++.+. .....| |++...+|++++++++|+++ +++++|+++++.+++.+++++||+|+
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~~~~gd~vi 77 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSHCERGEEYI 77 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHhcCCCCeeE
Confidence 37999999999 889999998763 333567 88899999999999999754 45777778788777788899999999
Q ss_pred EcCCCchh-HHHH-HHHcC-CEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHc-
Q 014594 175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE- 245 (422)
Q Consensus 175 ~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~- 245 (422)
++.|+|.. |... +...| ++++.++.+.++.+|++++++++++. ++++|++|||+ ||.+++.+++.+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~ 155 (333)
T PRK10534 78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF 155 (333)
T ss_pred EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence 99888853 4321 23333 78888887777899999999998632 68999999876 599999999988765
Q ss_pred --C-CCeEEEccCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcCCCC----Cc
Q 014594 246 --M-PILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPYN----VS 315 (422)
Q Consensus 246 --~-~~~li~Deay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~~~~----~~ 315 (422)
. ++++++||+|..+.. .+.....+..+.+.++ .||||.|+++ +| |+++++++++.+.+...+++ .+
T Consensus 156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~-~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~ 231 (333)
T PRK10534 156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT-ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQA 231 (333)
T ss_pred HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE-EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhH
Confidence 3 899999999874321 1122222222322222 4899988754 67 68889999999987766543 33
Q ss_pred HHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014594 316 VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK 395 (422)
Q Consensus 316 ~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~ 395 (422)
.+.+.++.++|++ ..+..++.+++|+++.+.|++++ +.+.+++++|+|++++. .+..++.+.|+++||.++++.
T Consensus 232 ~~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~nfv~~~~~~-~~~~~~~~~l~~~gi~v~~~~-- 305 (333)
T PRK10534 232 GILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAG-ADVMRQDTNMLFVRVGE-EQAAALGEYMRERNVLINASP-- 305 (333)
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCC-CccCCCCceEEEEECCc-hhHHHHHHHHHHcCeeecCCc--
Confidence 4667777777754 22333345567889999999986 45666789999999963 357788888889999998874
Q ss_pred CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 396 ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 396 ~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++|++.. +.++++++.++++.
T Consensus 306 ----~~rl~~~~r~t~e~~~~~~~~l~~ 329 (333)
T PRK10534 306 ----IVRLVTHLDVSREQLAEVVAHWRA 329 (333)
T ss_pred ----eEEEEEEeCCCHHHHHHHHHHHHH
Confidence 4677653 45666666666654
No 110
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.3e-31 Score=264.41 Aligned_cols=317 Identities=20% Similarity=0.212 Sum_probs=240.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~ 161 (422)
.+.+.|+.+.... .++.+.+++.+. ......+. ....++|+++++++|+ ++++|++|+|++++++.
T Consensus 18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 3468999887764 567888888652 21111111 1155899999999999 78999999999999999
Q ss_pred HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++++ +++||+|++++|.|+. +...++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~ 175 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGG 175 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccC
Confidence 99987 4789999999999863 455667789999999987777899999999996 78999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--- 309 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--- 309 (422)
+++.+++.++++. |+++|+|++|........ +...+.++++.|++|.+|.+| +||+++++++++.+....
T Consensus 176 ~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~ 249 (401)
T PRK10874 176 CPDLARAITLAHQAGMVVMVDGAQGAVHFPAD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPWQGGG 249 (401)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcccccccCC----chhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCCCeecCC
Confidence 9999999999987 999999999974322111 122345588899999888666 699999999888654211
Q ss_pred --------------------CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCceEE
Q 014594 310 --------------------QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSNFI 365 (422)
Q Consensus 310 --------------------~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~ 365 (422)
...+.+...+.++.++++ +.++....++.++.++++.+.|++++++.+. ++.+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~ 329 (401)
T PRK10874 250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLL 329 (401)
T ss_pred cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEE
Confidence 012445555555555553 3333236778888899999999988655543 4555667
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++.++ +.+.+++.+.|.++||.++++..+ +..+++|||++ +.++++++.++|+.
T Consensus 330 ~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 330 AFDFA-GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred EEEEC-CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHH
Confidence 77776 567789999999999999987642 34689999998 78888888888865
No 111
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=5.5e-31 Score=259.70 Aligned_cols=317 Identities=19% Similarity=0.220 Sum_probs=238.0
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-C-C--CCCC-CCc-------chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-K-F--PYIY-PDP-------ESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~--~~~y-~~~-------~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~ 162 (422)
+.+.|+.+.... .++.+.+++.+. . . ...+ +.. ...++|+++++++|.+ +++|++|+|++++++++
T Consensus 16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 579999887664 567888888662 1 1 1111 111 1457999999999984 78999999999999999
Q ss_pred HHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
+.++ +++||+|++++|.|+. +...++..|++++.++.+.++.+|++.+++++. ++++++++++|+||||.+
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~ 173 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC 173 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence 9987 4789999999999864 455667899999999987777899999999997 689999999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---- 309 (422)
.+.+++.++++. |+++|+|++|........ +...+..+++.|++|.+|.+| +||+++++++++.+....
T Consensus 174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR03392 174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPPWQGGGK 247 (398)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCCCeecCCc
Confidence 999999999987 999999999975432211 112334577888899888666 899999999887663211
Q ss_pred -------------------CCCCCcHHHHHHHHHHc---cCChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCceEEE
Q 014594 310 -------------------QPYNVSVAAEVAACAAL---QNPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSNFIL 366 (422)
Q Consensus 310 -------------------~~~~~~~~~~~aa~~~L---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~ 366 (422)
...+.+.....++.+++ .+.++..+.++.++.++++.+.|++++++.+. +....+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~ 327 (398)
T TIGR03392 248 MLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLA 327 (398)
T ss_pred eEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence 01234444444444444 33333337778888999999999988655543 33455677
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594 367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~---~~~~~~~~l~~al~~l 421 (422)
+.++ +.+.+++.+.|.++||.++.+... +.++++|||+ .+.+|++++.++|+.+
T Consensus 328 ~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 328 FDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred EEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence 7776 567889999999999999987642 3368999998 5778888888888653
No 112
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-31 Score=248.12 Aligned_cols=295 Identities=18% Similarity=0.238 Sum_probs=233.5
Q ss_pred CCC-CCcchHHHHHHHHHHcC------CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEE
Q 014594 124 YIY-PDPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (422)
Q Consensus 124 ~~y-~~~~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 195 (422)
..| +..|..+|...+.++.+ .-.+ +|++|+|.+.+++.+++.++++||.|+++.++|...-...+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 456 44588999999999765 1122 899999999999999999999999999999999988888899999999
Q ss_pred EecCCCCCCCCHHHHHHHhhc--------CCCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCC
Q 014594 196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL 262 (422)
Q Consensus 196 ~v~~~~~~~~d~~~l~~~i~~--------~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~ 262 (422)
+|+++++ ++++|.|++.+.+ ++++++|.. +-+||||..++.+..++|.+. ++++|+||.|..+.++
T Consensus 174 pv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 174 PVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN 252 (472)
T ss_pred eccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence 9998654 8999999998753 347788866 779999999999998887654 9999999999876543
Q ss_pred C------------c---h-------hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHH
Q 014594 263 E------------S---R-------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318 (422)
Q Consensus 263 ~------------~---~-------~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~ 318 (422)
. + . ....+..+++|...||||.++ ||+|+||+.+++-+++++.+.... -++|.+.
T Consensus 253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s 331 (472)
T KOG0634|consen 253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS 331 (472)
T ss_pred ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence 1 0 0 111234689999999999997 999999999999999988776554 3467777
Q ss_pred HHHHHHHccC---C---hHHH-HHHHHHHHHHHHHHHHcc-CCCC---cccCCCceEEEEEeC-------CCCC-HHHHH
Q 014594 319 EVAACAALQN---P---IYLE-VKEALIKERERLFKLLKD-VPFL---NPYPSYSNFILCEVT-------SGMD-AKKLK 379 (422)
Q Consensus 319 ~~aa~~~L~~---~---~~~~-~~~~~~~~~~~l~~~L~~-~~~~---~~~p~~~~f~~~~~~-------~~~~-~~~~~ 379 (422)
|..+.+.|+. + +|+. ++..|..++..+..+|.+ ++.. ...|.+|+|+|++++ +..+ .+++.
T Consensus 332 q~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i 411 (472)
T KOG0634|consen 332 QGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEII 411 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHH
Confidence 7777777764 2 5666 888999999999999987 4433 246889999999997 4444 44444
Q ss_pred HH-HHhCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DD-LAKMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~-L~~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.. +.++||.+.+|..+. ..-++|++++..+ .|+|.++++++
T Consensus 412 ~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~-~e~l~~g~~rf 460 (472)
T KOG0634|consen 412 FIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAE-PEKLDEGIERF 460 (472)
T ss_pred HHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCC-HHHHHHHHHHH
Confidence 44 459999999988721 1239999999765 37899999986
No 113
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=8.6e-31 Score=255.44 Aligned_cols=280 Identities=19% Similarity=0.189 Sum_probs=217.4
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHH
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 208 (422)
..++++.+|+++|++ .+++++|+++++..++.+++++||.|+++.+.|......++..|++++.++.+ .++.+|++
T Consensus 53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 130 (370)
T TIGR02539 53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE 130 (370)
T ss_pred HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence 568899999999975 56778999999999999999999999999888654446678899999999954 35789999
Q ss_pred HHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 209 ~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
++++.+++ .++++|++++|+||||...+.+++.++++. |+++|+||+|..+...... ...+..++++|+
T Consensus 131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~----~~~~~di~v~s~ 206 (370)
T TIGR02539 131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSA----KEIGADFIVGSG 206 (370)
T ss_pred HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCH----HHcCCCEEEeeC
Confidence 99999853 368899999999999999999999999987 9999999999975321111 122345778999
Q ss_pred hhhhccccccceeeecCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHc
Q 014594 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN-PIYLEVKEALIKERERLFKLLK 350 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~----------~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~ 350 (422)
||.++ +|.|+||+++++++++.+.....+|+.+.+ .+.++.+++.+ .++++..++..++++++++.|+
T Consensus 207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~ 285 (370)
T TIGR02539 207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELE 285 (370)
T ss_pred ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 567899999999999999887776654433 55555666654 4455523333344568999999
Q ss_pred cCCCCc--ccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcE-EEeCCCCCCCCeEEEEe--cChhhHHHHHHH
Q 014594 351 DVPFLN--PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVM-IRHYNNKELKGYVRVSV--GKPEHTDALMEC 417 (422)
Q Consensus 351 ~~~~~~--~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~-v~~~~~~~~~~~iRis~--~~~~~~~~l~~a 417 (422)
++++.. +.|+.++|+++++|.. .+...+.+.|+++||. ++++ .++++||++ .+.++++++.++
T Consensus 286 ~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~ 361 (370)
T TIGR02539 286 DIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDS 361 (370)
T ss_pred hCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHH
Confidence 987532 4578899999988621 1234688999999997 6643 257999998 778888888888
Q ss_pred Hhhh
Q 014594 418 LMHL 421 (422)
Q Consensus 418 l~~l 421 (422)
|+.+
T Consensus 362 L~~~ 365 (370)
T TIGR02539 362 FEEI 365 (370)
T ss_pred HHHH
Confidence 7753
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=2.6e-30 Score=254.54 Aligned_cols=317 Identities=15% Similarity=0.162 Sum_probs=233.0
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-C-CCCCCCC-Cc---c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIYP-DP---E----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~y~-~~---~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.+.++|+|..|+. .++++|++++++.+ + .++.+|+ .. | ..++|+++++++|. +++++++|+++++..
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~ 113 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG 113 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence 4578999999974 67888999888765 2 2233442 12 3 37899999999996 467778899999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---C--CCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~ 236 (422)
++.+++++||.|+++.|.|+.+...++..+++.+.++ ..|++++++.+++ . ++++|++++++||||.+.+
T Consensus 114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~ 188 (393)
T TIGR01822 114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP 188 (393)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence 9999999999999999999999888888888776554 4789999998863 2 7888998899999999999
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCC---chhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
.+++.++++. |+++|+||+|.....+. ......+. .+.+++++|+||.+ +|+|+||+++++++++.+.....+
T Consensus 189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~ 266 (393)
T TIGR01822 189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP 266 (393)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence 9999999987 99999999996322211 11111221 24568999999976 478999999999999988765433
Q ss_pred C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
+ +.++..+.++.++|+..+..+ .+++++++++++.+.|+++++ .+.++.+.++.+.+++..++.++++.|.++|
T Consensus 267 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~g 345 (393)
T TIGR01822 267 YLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGF-DIKPADHPIIPVMLYDAVLAQRFARRLLEEG 345 (393)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2 234455555666664322334 788899999999999988753 3444455677777664446788999999899
Q ss_pred cEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHh
Q 014594 387 VMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLM 419 (422)
Q Consensus 387 I~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~ 419 (422)
|.+.....+ .....+||+++. .++++++.++|+
T Consensus 346 I~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~ 384 (393)
T TIGR01822 346 IYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFT 384 (393)
T ss_pred eeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 999743221 233579998864 444444544444
No 115
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=100.00 E-value=2.1e-30 Score=250.12 Aligned_cols=306 Identities=20% Similarity=0.201 Sum_probs=227.8
Q ss_pred CCCCCCCCHHHHHHHhc-CCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594 103 NENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~-~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (422)
.+++++++|.+++++.+ ......| +++...++++.+++++| ++++++++|+++++..++++++++||+|+++.|+|
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~ 81 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH 81 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence 47899999999999987 3222345 66678999999999999 56788888888999999999999999999999998
Q ss_pred hhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594 181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (422)
Q Consensus 181 ~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~ 247 (422)
..+.. .+...|++++.++.+. +.+|++++++++++ +++++|+++||+|| |.+++.+++++|++. |
T Consensus 82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~ 159 (338)
T cd06502 82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG 159 (338)
T ss_pred eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence 64332 3455899999999754 68999999999863 27899999999997 667788887777653 8
Q ss_pred CeEEEccCCcccc--CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC----CCCCcHHHHHH
Q 014594 248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVA 321 (422)
Q Consensus 248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~a 321 (422)
+++|+||+|..+. ..+........ +..+++.|+||.++++| .+++++++++++.+..... .++.+.+.+.+
T Consensus 160 ~~livDea~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 236 (338)
T cd06502 160 LPLHLDGARLANAAAALGVALKTYKS-GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAA 236 (338)
T ss_pred CeEeechHHHHHHHHhcCCCHHHHHh-cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHH
Confidence 9999999986442 11112222212 22356889999999887 2345678999988876542 34567788888
Q ss_pred HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC-CCHHHHHHHHH---hCCcEEEeCCCCCC
Q 014594 322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-MDAKKLKDDLA---KMGVMIRHYNNKEL 397 (422)
Q Consensus 322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-~~~~~~~~~L~---~~gI~v~~~~~~~~ 397 (422)
+..+|++..+.+..+++.++++++.+.|+++++ .+.+..++|+.++++.+ .....+.+.+. ++|+.+.+..
T Consensus 237 ~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~---- 311 (338)
T cd06502 237 GLAALENDLWLRRLRHDHEMARRLAEALEELGG-LESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG---- 311 (338)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC-CcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC----
Confidence 888898776666667888889999999999875 55677889998887522 11223333333 6799998764
Q ss_pred CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 398 KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 398 ~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.+++||++. +.++++++.++++.
T Consensus 312 ~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 312 EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 289999998 56666666666653
No 116
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=5.5e-30 Score=248.98 Aligned_cols=312 Identities=18% Similarity=0.123 Sum_probs=233.3
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594 104 ENPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (422)
..|.+.++.+.+++.+....++|+... ..++++.+++++|++++ .+++++|+++++..++.+++++||+|++..++|
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~ 84 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGV 84 (356)
T ss_pred CCCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 355667899999997643335666543 67899999999998544 578899999999999999999999999998877
Q ss_pred hh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594 181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (422)
Q Consensus 181 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~ 257 (422)
.. +...++..|++++.++.+.++.+|++++++.++++++++|++++|+||||.+.+.+++.++++. |+++++|++|.
T Consensus 85 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~ 164 (356)
T cd06451 85 FGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSS 164 (356)
T ss_pred hhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehh
Confidence 54 5567788999999999776678999999999974489999999999999999999999999987 99999999986
Q ss_pred cccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--hc-------------------CCCCCcH
Q 014594 258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AK-------------------QPYNVSV 316 (422)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~-------------------~~~~~~~ 316 (422)
... .... ....+..+++.|.+|.++.+ .++||++.++++++.+.. .. ...+.+.
T Consensus 165 ~g~---~~~~-~~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 239 (356)
T cd06451 165 LGG---EPFR-MDEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPV 239 (356)
T ss_pred ccC---cccc-ccccCccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChH
Confidence 321 1111 11223346778899988744 368999999998887753 00 1112344
Q ss_pred HHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCCCCHHHHHHHHHhC-CcEE
Q 014594 317 AAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKM-GVMI 389 (422)
Q Consensus 317 ~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v 389 (422)
..+.++.++++. ....+ ..++.+++++++.+.|+++++....+. .+.++|+.++++.+..++++.|.++ ||.+
T Consensus 240 ~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~ 319 (356)
T cd06451 240 NLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEI 319 (356)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEE
Confidence 444555555533 12334 777888999999999988764222221 2345577777677889999999987 9999
Q ss_pred EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 390 RHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 390 ~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+++..+..+++||++++ +.++++++.++|+.
T Consensus 320 ~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 320 AGGLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred ecccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 98765555679999995 56677777777765
No 117
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=4.8e-30 Score=254.51 Aligned_cols=331 Identities=16% Similarity=0.164 Sum_probs=239.2
Q ss_pred CCchHHHHHHhCCCCCCeEEcCCCCC--CCCCCH---HHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHcCCCCCCEEE
Q 014594 80 ILPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILV 151 (422)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~~~-~~~y-~~~~~~~lr~~la~~~~~~~~~i~~ 151 (422)
....+..+++....+.++|+|..+++ ++.++. .+.+++.+ +.. ...| +..+..+||++++++++. +++++
T Consensus 21 ~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~--~~vv~ 98 (460)
T PRK13238 21 LTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY--PYTIP 98 (460)
T ss_pred ccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC--CcEEE
Confidence 34455566666667788999999998 677655 45555443 222 2568 566899999999999985 58999
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--------CCCC--CCHHHHHHHhhc---CC
Q 014594 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFS--LNVELIADAVER---EK 218 (422)
Q Consensus 152 ~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~--~d~~~l~~~i~~---~~ 218 (422)
|+|+++++.+++.++++||| |++++|.|..|....+..|++++.++.+ ++|. +|+++|++.+++ ++
T Consensus 99 t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~ 177 (460)
T PRK13238 99 THQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAEN 177 (460)
T ss_pred CCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCc
Confidence 99999999999999999999 9999999999998888999999999864 2454 999999999974 37
Q ss_pred CeEEEEeCCCCccC-cCCCHHHHHHHHc---C-CCeEEEccCCcc----ccC------CCchhhhhhcCCcEEEEccChh
Q 014594 219 PKCIFLTSPNNPDG-SIINDEDLLKILE---M-PILVVLDEAYTE----FSG------LESRMEWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 219 ~~~i~l~~p~NPtG-~~~~~e~l~~i~~---~-~~~li~Deay~~----~~~------~~~~~~~~~~~~~~i~~~S~SK 283 (422)
+++|++++|+|||| .+++.+++++|++ . |++||+|+++.. |.. .+..+..+ +..++|++|
T Consensus 178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D 252 (460)
T PRK13238 178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYAD 252 (460)
T ss_pred eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCc
Confidence 99999999999998 9999887666654 3 999999997742 211 11111111 233456666
Q ss_pred hhccccccc------eeeecC-HHHHHHHHHhcC------CCCC-cHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHH
Q 014594 284 RAGLAGLRV------GYGAFP-LSIIEYLWRAKQ------PYNV-SVAAEVAACAALQN---PIYLEVKEALIKERERLF 346 (422)
Q Consensus 284 ~~~~~G~r~------G~i~~~-~~~~~~l~~~~~------~~~~-~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~ 346 (422)
.+.++|+|+ |+++++ +++++++..... .++. +...|.|+..+|.+ .++.+ ...+++++|.
T Consensus 253 ~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~---~~~~~~~~l~ 329 (460)
T PRK13238 253 GLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLA---YRIGQVEYLG 329 (460)
T ss_pred EEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHH---HHHHHHHHHH
Confidence 666666664 366666 588888876631 2333 44557777766654 23333 2233679999
Q ss_pred HHHccCCCCcccCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCC---C----C------CCCeEEEE
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNN---K----E------LKGYVRVS 404 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~~~~---~----~------~~~~iRis 404 (422)
+.|++.|+-.+.|.+|.|+++++.. +..+.+++.+|. +.||.+.+++. . . ...++|++
T Consensus 330 ~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla 409 (460)
T PRK13238 330 EGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLA 409 (460)
T ss_pred HHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEe
Confidence 9999887656678999999998752 124677888877 89999988664 1 1 14799999
Q ss_pred ecC----hhhHHHHHHHHhhh
Q 014594 405 VGK----PEHTDALMECLMHL 421 (422)
Q Consensus 405 ~~~----~~~~~~l~~al~~l 421 (422)
+.. .+++|.+.++|+.+
T Consensus 410 ~~rr~~~~~~~~~~~~~l~~~ 430 (460)
T PRK13238 410 IPRRVYTQSHMDYVAEALKAV 430 (460)
T ss_pred cccccCCHHHHHHHHHHHHHH
Confidence 873 55566666666654
No 118
>PLN02721 threonine aldolase
Probab=100.00 E-value=3.1e-30 Score=250.42 Aligned_cols=311 Identities=21% Similarity=0.192 Sum_probs=220.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDK 172 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~-~gd~ 172 (422)
.+++|+.|.+++ +++.+.+++... .....|+++...+||++++++++.+ .+++++++++++..++.++++ +||+
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~Gs~a~~~~l~~~~~~~gd~ 82 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKE--AALFVPSGTMGNLISVLVHCDVRGSE 82 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCc--eeEEecCccHHHHHHHHHHccCCCCe
Confidence 468999999997 678888998753 3334455566889999999999974 345555556666677777777 9999
Q ss_pred EEEcCCCch-hHHH--HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCCeEEEEeC-CCCccCcCCCHHHHHH
Q 014594 173 IVDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLLK 242 (422)
Q Consensus 173 Vl~~~p~y~-~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~-p~NPtG~~~~~e~l~~ 242 (422)
|++++|+|. .+.. .+...|++++.++.++++.+|++++++.+++ +++++|++++ +|||||.+++.+++++
T Consensus 83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 999999985 3432 5667899999999777778999999999964 4789999986 5789999999776666
Q ss_pred H---HcC-CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCCCC-
Q 014594 243 I---LEM-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYN- 313 (422)
Q Consensus 243 i---~~~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~~~- 313 (422)
| ++. |+++|+||+|..... +..........+ .++.|+||.++. ++|+ +++++++++.+......++
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGG 237 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCC
Confidence 5 444 999999999863321 111111111222 445579998763 3565 6789999888766654432
Q ss_pred -CcHHHHHH--HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC--CCHHHHHHHHHhCC
Q 014594 314 -VSVAAEVA--ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--MDAKKLKDDLAKMG 386 (422)
Q Consensus 314 -~~~~~~~a--a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~--~~~~~~~~~L~~~g 386 (422)
.+...+.+ +...+ .++.+..++..++++++.+.|++++.+. +.+..++|+|++++.. .+.+.+++.|.++|
T Consensus 238 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 315 (353)
T PLN02721 238 GMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHG 315 (353)
T ss_pred CeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCC
Confidence 22222222 22333 2334433344567889999999886552 4456678999998753 57889999999999
Q ss_pred cEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++++. .+++|++++ +.++++++.+++++
T Consensus 316 i~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 316 VLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred cEEecCC----CceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9999875 579999997 56666777776654
No 119
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.98 E-value=4.5e-30 Score=249.89 Aligned_cols=306 Identities=19% Similarity=0.205 Sum_probs=226.5
Q ss_pred CCCCCHHHHHHHhcCCCCC--------CC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 106 PYGPPPEVREALGQLKFPY--------IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 106 ~~~~~~~v~~al~~~~~~~--------~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
+-+..+++.+++.+...+. .. .++...++++++++++|+ +++++++|+++++..++.+++++||+|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl 87 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWVV 87 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEE
Confidence 3345677888887632110 11 123467999999999998 7899999999999999999999999999
Q ss_pred EcCCCchhHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
++.++|......++..|++++.++.+.+ +.+|++.+++++.+ .++++++++||+||||...+.+++.++++.
T Consensus 88 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~ 167 (361)
T cd06452 88 VDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHE 167 (361)
T ss_pred EcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHH
Confidence 9999887665677889999999996543 58999999998863 378999999999999999999999999987
Q ss_pred -CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcH---------
Q 014594 247 -PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--------- 316 (422)
Q Consensus 247 -~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~--------- 316 (422)
|+++|+|++|........ ....+.+++++|++|.++ ++.|+||+++++++++++.+...+|+.+.
T Consensus 168 ~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 242 (361)
T cd06452 168 YGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLR 242 (361)
T ss_pred cCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccC
Confidence 999999999984321111 113355699999999997 55699999999999999877665543322
Q ss_pred -HHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCceEEEEEeCC--------CCCHHHHHHHHH
Q 014594 317 -AAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS--------GMDAKKLKDDLA 383 (422)
Q Consensus 317 -~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~f~~~~~~~--------~~~~~~~~~~L~ 383 (422)
..+.++.+++.. .++++..++..++++++.+.|++++++.+. ++..+|+.++.+. .....++.+.|+
T Consensus 243 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 322 (361)
T cd06452 243 GAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELK 322 (361)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHH
Confidence 123333333322 233333333345568899999998545543 5667888887651 112236899999
Q ss_pred hCCcEEEeCCCCCCCCeEEEEe--cChhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNNKELKGYVRVSV--GKPEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~~~~~~~iRis~--~~~~~~~~l~~al~~l 421 (422)
++||.+.. .+..+++|++. .++++++.+.++|+.+
T Consensus 323 ~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~ 359 (361)
T cd06452 323 KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEI 359 (361)
T ss_pred HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999632 23456999999 6888899999998864
No 120
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=1.2e-29 Score=249.14 Aligned_cols=317 Identities=19% Similarity=0.159 Sum_probs=232.9
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CCC---CC-----CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~---~y-----~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.++++|||..+++ .+.++|++.+++.+ +. +.. .| +.+...+++++++++++. ++.++++ ++++++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~-~g~~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFS-SGYAANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEC-cHHHHHHH
Confidence 5678999999875 34567889988876 21 111 11 122357899999999983 4455555 45566666
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+++.++++||.|+++.|+|+.+...+...|++++.++. .|++.+++.++.. +++++++.+++||||...+.++
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~ 189 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE 189 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence 77888999999999999999998888889999988873 4789999988642 3556666689999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCC--Cc-hhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~--~~-~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~- 312 (422)
+.++|+. |+++|+||+|..+..+ +. ... .+...++++++.|+||.++.+| ||+++++++.+.+.....++
T Consensus 190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~ 266 (385)
T PRK05958 190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI 266 (385)
T ss_pred HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence 9999997 9999999999764322 11 121 1233567899999999998766 99999999988876544332
Q ss_pred ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594 313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 388 (422)
Q Consensus 313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~ 388 (422)
+.++..+.++.++|+..+..+ ..+++.++++++.+.|++++ +.+.++.++|+++.+++..++.++.+.|.++||.
T Consensus 267 ~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~ 345 (385)
T PRK05958 267 FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQLMDSQSAIQPLIVGDNERALALAAALQEQGFW 345 (385)
T ss_pred ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 345566666666775422114 77889999999999999876 3455667889999987545677899999999999
Q ss_pred EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 389 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 389 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++++..+ ..++++||+++ +.++++++.++|+.
T Consensus 346 v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 346 VGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred EecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 9875432 23579999997 55555555555543
No 121
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.98 E-value=8.8e-30 Score=251.64 Aligned_cols=319 Identities=21% Similarity=0.218 Sum_probs=238.7
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCC-------CCCc----chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYI-------YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~-------y~~~----~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.|+.+... ++++.+.+++.+. ..... +... ...++|+.+++++|.+ +++|++|+|+++++.
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~ 94 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN 94 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence 4567999998776 3567788888652 11111 1111 2458999999999997 689999999999999
Q ss_pred HHHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594 161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (422)
Q Consensus 161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (422)
+++.++ +++||+|+++++.|+. +...++..|++++.++.++++.+|++.+++.+. ++++++++++|+||||
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG 173 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG 173 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence 998875 5789999999998764 345566789999999977777899999999997 6899999999999999
Q ss_pred cCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc--
Q 014594 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-- 309 (422)
Q Consensus 233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-- 309 (422)
.++|.+++.++++. |+++|+|++|...... ..+...+.++++.|++|.+|.+| +|++++++++++.+....
T Consensus 174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~----~~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~g 247 (403)
T TIGR01979 174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP----VDVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPPFLGG 247 (403)
T ss_pred ccCCHHHHHHHHHHcCCEEEEEchhhcCccc----cCccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCCCeecC
Confidence 99999999999987 9999999999743211 11223356689999999887666 899999988877653110
Q ss_pred ---------------------CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC----
Q 014594 310 ---------------------QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-PS---- 360 (422)
Q Consensus 310 ---------------------~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~---- 360 (422)
...+.+.....++.++++.- ...+ .+++..+.++++.+.|++++++.+. |.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~ 327 (403)
T TIGR01979 248 GEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAED 327 (403)
T ss_pred CCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccc
Confidence 01134555555666655431 1234 7788899999999999888656543 32
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+.++.+.++ +.+..++.+.|.++||.++.+.. .+.++++|||++ +.++++++.++|+.+
T Consensus 328 ~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~ 398 (403)
T TIGR01979 328 RGGIISFNVE-GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV 398 (403)
T ss_pred cCceEEEEeC-CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence 2667778876 45678898889999999987642 233689999987 677888888888654
No 122
>PRK02948 cysteine desulfurase; Provisional
Probab=99.98 E-value=2.2e-30 Score=254.03 Aligned_cols=314 Identities=17% Similarity=0.139 Sum_probs=233.3
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcC-C-CC----CCCCC-----cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 98 VKIDANENPYGPPPEVREALGQL-K-FP----YIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~-~~----~~y~~-----~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+.|+.+.... +++.+++++.+. . .. ..+.. .-..++|+.+++++|+++++|++++|+++++..++.++
T Consensus 2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 5677766553 567888888652 1 10 11110 11457899999999999999999999999999998877
Q ss_pred c----CCCCEEEEcCCCchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 167 L----DPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+ ++||.|++....|+.+ ...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.++|.++
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~ 159 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE 159 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence 5 5789999988666544 44456689999999977777899999999996 68999999999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHH------HhcCC
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP 311 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~------~~~~~ 311 (422)
+.++++. |+++++|+++.. ...+. .+...+.++++.|++|.+|.+| +|++++++++ +.... ....+
T Consensus 160 I~~l~~~~~~~vivD~~~~~-g~~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~ 233 (381)
T PRK02948 160 IGALLKKYNVLFHSDCVQTF-GKLPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP 233 (381)
T ss_pred HHHHHHHcCCEEEEEChhhc-ccccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence 9999987 999999976653 21111 1224466788999999998888 7999887764 11111 01135
Q ss_pred CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC-ceE-----EEEEeCCCCCHHHHHHHHH
Q 014594 312 YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY-SNF-----ILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~-~~f-----~~~~~~~~~~~~~~~~~L~ 383 (422)
++++.+++.++.++++.. ++.+ .++++++.++++.+.|++++.. +.+.+ .++ +.+.++ +.+.+++...|.
T Consensus 234 ~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-v~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~ 311 (381)
T PRK02948 234 GTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLP-IEVEGHSTSCLPHIIGVTIK-GIEGQYTMLECN 311 (381)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEeCCCccCcCCEEEEEeC-CCCHHHHHHhcc
Confidence 788899999999888763 5666 8899999999999999998642 22221 232 333444 457788888888
Q ss_pred hCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
++||.++.+... ...+++|||++ +.++++++.++|+.+
T Consensus 312 ~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 312 RRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred cCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 999999976531 12479999998 788888898888753
No 123
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=2.3e-29 Score=248.74 Aligned_cols=318 Identities=18% Similarity=0.197 Sum_probs=237.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCC------CCC-C----cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPY------IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~------~y~-~----~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~ 161 (422)
.+++.|+.+.... +++.+.+++.+. .... .|. . ....++|++++++++. ++++|++|+|++++++.
T Consensus 22 ~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~ 100 (406)
T PRK09295 22 LPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL 100 (406)
T ss_pred CceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 3579999887554 567788887652 1101 111 0 1145899999999997 67899999999999999
Q ss_pred HHHH----hcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
++.+ ++++||+|+++.+.|+ .+...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGT 179 (406)
T ss_pred HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhcccc
Confidence 9886 4689999999998875 3455667789999999977777899999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh----
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---- 308 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---- 308 (422)
++|.+++.++++. |+++++|++|...... + .+...+.++++.|++|.+|.+| +||+++++++++.+...
T Consensus 180 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~ 253 (406)
T PRK09295 180 ENPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG 253 (406)
T ss_pred cCCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhCCCcccCC
Confidence 9999999999987 9999999999754321 1 1223345688899999888666 89999999887654210
Q ss_pred --------------------cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-C-CCce
Q 014594 309 --------------------KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-P-SYSN 363 (422)
Q Consensus 309 --------------------~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~ 363 (422)
....+.+.....++.++++.- ...+ ++++.++.++++.+.|++++.+.+. | ....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 333 (406)
T PRK09295 254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG 333 (406)
T ss_pred ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce
Confidence 011256666666666666532 1234 7788889999999999888655543 2 2245
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+.+.++ +.+.+++.+.|.++||.++.|.. .+.++++|+|+. +.+|+|.|.++|+.+
T Consensus 334 iv~~~~~-~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred EEEEEEC-CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 6667776 45778898889899999987653 123578999976 677888888888765
No 124
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=2.3e-29 Score=248.13 Aligned_cols=319 Identities=17% Similarity=0.179 Sum_probs=229.3
Q ss_pred CCCCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCCCCC----cch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~y~~----~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.+.++|+|..++ ..++++|++.+++.+. ...+.|+. .|. .++++.++++++.+ ++|++|+| ++++..
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~ 117 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG 117 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence 467899999887 5777889888877662 22233321 233 46777778888864 67888888 678888
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---C--CCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~ 236 (422)
++++++++||.|++++|+|+.+...++..|++++.++. .|++.+++.+++ + ++++|++.+.+||+|...+
T Consensus 118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 89999999999999999999998888889999888763 478888888753 2 6778887788999999999
Q ss_pred HHHHHHHHcC-CCeEEEccCCccc-cC-CCc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEF-SG-LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~-~~-~~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
.+++.++++. ++++|+||+|... .. .+. ...... ..+.+++++||||.++ |+|+||+++++++++.+.....+
T Consensus 193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~ 270 (397)
T PRK06939 193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP 270 (397)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence 9999999987 9999999999632 21 111 122222 1245799999999884 56999999999999988765443
Q ss_pred C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
+ +.++..+.++.++++.....+ .+++++++++++.+.|+++++ ...+..+.++++.++.+.+..++++.|.++|
T Consensus 271 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 349 (397)
T PRK06939 271 YLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGF-TLGPGEHPIIPVMLGDAKLAQEFADRLLEEG 349 (397)
T ss_pred ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence 2 223444555555554322223 778899999999999998764 3334455566666654446788999999889
Q ss_pred cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.+.+...+ ...+++|++++...+.+++.+++++|
T Consensus 350 I~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L 387 (397)
T PRK06939 350 VYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAF 387 (397)
T ss_pred ceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 999864321 23468999986422235566666554
No 125
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.4e-29 Score=250.44 Aligned_cols=316 Identities=20% Similarity=0.183 Sum_probs=230.8
Q ss_pred CCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CC-------CCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
++.++++++ .++++++|.+++++.+ +. ++ ..|+.. ...+|++++++++|. ++.|++++|+ +++..++
T Consensus 46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i 123 (410)
T PRK13392 46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL 123 (410)
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence 345666555 7899999999988865 21 21 123443 467999999999995 5677777765 5666677
Q ss_pred HHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
..+. .+||.|++..+.|..+...++..|+++..++.+ |.+.+++.+. .+++++|++++|+||||.+++.+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 6564 388988887777877767777889988777531 4455555443 25789999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCC--Cchh-hhhhcCC-cEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~--~~~~-~~~~~~~-~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~- 312 (422)
++.++++. ++++|+||+|....++ +... ...+..+ ..++++||||.||++| ||+++++++++.+.+...+|
T Consensus 199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI 275 (410)
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence 99999987 9999999999843322 1111 1111112 2488899999999888 99999999999888776543
Q ss_pred ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594 313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI 387 (422)
+.+++.+.++.++|+..+... .+++++++++++.+.|++++ +.+.++.++|+.+.++...+..++.+.|+ ++||
T Consensus 276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI 354 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG-IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGI 354 (410)
T ss_pred ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCE
Confidence 345677888888887544334 66788999999999999886 45556778887777653334568888886 7899
Q ss_pred EEEeCCCC---CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK---ELKGYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~---~~~~~iRis~---~~~~~~~~l~~al~~l 421 (422)
.++++..+ ....++||++ .+.++++++.++|+++
T Consensus 355 ~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~ 394 (410)
T PRK13392 355 YIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI 394 (410)
T ss_pred EEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99976542 3347999997 5677788888887753
No 126
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=6.4e-29 Score=245.04 Aligned_cols=311 Identities=20% Similarity=0.178 Sum_probs=226.5
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhc-CC-C----CCCCCCc-c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQ-LK-F----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~-~----~~~y~~~-~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.+.|+.+.... +++.+++++.+ +. . ...|+.. + ..++|+.+++++|.++++|++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 68888765544 56778887765 21 1 1235432 2 46899999999999877899999999999888776
Q ss_pred h---cCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
+ +++||+|++..|.|... ...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+.+.
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~ 175 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL 175 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence 5 68999999999988643 345677899999998654 57899999999997 689999999999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC----
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---- 312 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~---- 312 (422)
+++.++++. |+++|+|+++.... . ...+...+..+++.|++|.+| .|+||+++++++++.+......+
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~~~---~-~~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~ 248 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYAPH---G-LIDVQATGADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDT 248 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhccc---c-CCCHHHcCCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCC
Confidence 999999987 99999999985321 1 112223445577789999764 46899999999888765433221
Q ss_pred --------CCcHHH---HHHHHHHccCCh-------------HHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----Cc
Q 014594 313 --------NVSVAA---EVAACAALQNPI-------------YLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YS 362 (422)
Q Consensus 313 --------~~~~~~---~~aa~~~L~~~~-------------~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~ 362 (422)
+.+... ..++...+.+.+ +.+ .+++..+.++++.+.|++++.+.+.++ .+
T Consensus 249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 328 (397)
T TIGR01976 249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARV 328 (397)
T ss_pred CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCC
Confidence 223332 333334443221 244 677888899999999998875554332 56
Q ss_pred eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----------CCCCeEEEEe---cChhhHHHHHHH
Q 014594 363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----------ELKGYVRVSV---GKPEHTDALMEC 417 (422)
Q Consensus 363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-----------~~~~~iRis~---~~~~~~~~l~~a 417 (422)
+++.+.++ +.+..++.++|.++||.++.+..+ ...+++|||+ .+.++++++.++
T Consensus 329 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~ 396 (397)
T TIGR01976 329 PTVSFTVH-GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEA 396 (397)
T ss_pred ceEEEEeC-CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHh
Confidence 78888775 457889999999999999976431 2347899999 455555555544
No 127
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=7.6e-29 Score=246.30 Aligned_cols=318 Identities=21% Similarity=0.247 Sum_probs=236.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-C---CCC---CCCc----chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~---y~~~----~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~ 161 (422)
.+.+.|+.+... ++++.+.+++.+. . . ... |... ...++|++++++++.+ +++|++|+|++++++.
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 457999987665 5678888888652 1 1 011 1111 1458999999999985 5799999999999999
Q ss_pred HHHH----hcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++. .+++||+|+++.+.|+ .+...++..|++++.++.+.+..+|++++++.++ +++++|++++|+||||.
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS 188 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence 9886 3688999999999775 3555667789999999976666799999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--- 309 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--- 309 (422)
++|.++|.++++. |+++|+|++|.... ..+ .+...+.++++.|++|.+|.+| +||+++++++++.+....
T Consensus 189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~-~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~p~~~g~ 262 (424)
T PLN02855 189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPV-DVQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMPPFLGGG 262 (424)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCC-CchhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCCCEecCC
Confidence 9999999999987 99999999996321 111 1223344578999999777555 899999998877653220
Q ss_pred --------------------CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-C------
Q 014594 310 --------------------QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY-P------ 359 (422)
Q Consensus 310 --------------------~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p------ 359 (422)
...+.+.....++.++++. ....+ ++++..+.++++.+.|++++.+.+. +
T Consensus 263 ~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 342 (424)
T PLN02855 263 EMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGV 342 (424)
T ss_pred CceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccccc
Confidence 1123444555555555542 22344 7888899999999999887655543 1
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEeCCC--------CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594 360 SYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRHYNN--------KELKGYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 360 ~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~--------~~~~~~iRis~---~~~~~~~~l~~al~~l 421 (422)
..++++.+.++ +.+.+++.+.|.++ ||.++.+.. .+.++++|||+ .+.+|+++|.++|+.+
T Consensus 343 ~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~ 415 (424)
T PLN02855 343 GRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT 415 (424)
T ss_pred CcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 12467888887 56788999999866 999997653 13357899998 6788888888888753
No 128
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=5.4e-29 Score=244.03 Aligned_cols=314 Identities=17% Similarity=0.197 Sum_probs=222.4
Q ss_pred CCCCeEEcCCC--CCCCCCC-HHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
.+..+|||.++ .++++.. |.+.+++.+ +.. ...|+.+...+|+++++++++. +++++++|+++++..+++
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANEAALK 102 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHH
Confidence 46778999886 4566554 888887765 221 2456666678999999999986 499999999999999988
Q ss_pred Hh---cC----CCCEEEEcCCCchhHHHHHHHcCCEEEE----ecCCCCCCC----CHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 165 CV---LD----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 165 ~l---~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~----d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
.+ .. ++|+|+++.|+|+.+...+...+..... .+...++.. |++.+++.+. .++++|++++++|
T Consensus 103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~ 181 (379)
T TIGR00707 103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG 181 (379)
T ss_pred HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence 54 22 3799999999998877666655544321 222122222 8999999987 5789999987777
Q ss_pred ccCcC-CCHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 230 PDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 230 PtG~~-~~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
|+|.. ++.+++.+| ++. ++++|+||+|.+|...+... ......++++ +|||.++ +|+|+||++++++++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~ 257 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA 257 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence 88864 566666555 444 99999999999886543221 1222233333 6899999 999999999999999
Q ss_pred HHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC---CcccCCCceEEEEEeCCCCCHHH
Q 014594 303 EYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF---LNPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 303 ~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
+.+... ...++.+++.+.++.++|+..+..+..++++++++++++.|++++. ....+..|+|+|+++++ +..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 335 (379)
T TIGR00707 258 EAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCKD 335 (379)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHHH
Confidence 988763 3457789999999998886322112556667777777777665421 12234578899999863 4788
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+.+.|.++||.+++.. .+++||+++ +.++++++.++++
T Consensus 336 ~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 336 IVKKALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred HHHHHHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 9999999999999864 489999964 4444444444444
No 129
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=4.7e-28 Score=234.68 Aligned_cols=315 Identities=21% Similarity=0.160 Sum_probs=226.2
Q ss_pred eEEcCCCCC-CCCCCHHHHHHHhc-CC-CCCC---C----C-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 97 IVKIDANEN-PYGPPPEVREALGQ-LK-FPYI---Y----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 97 ~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~---y----~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
+++|+.++- ....+|++++++.+ +. +... | . .+...+++++++++++.+ + .++++++++++..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~-~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-A-ALVFSSGYAANDGVLST 80 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-C-EEEeccHHHHHHHHHHH
Confidence 456665542 23447899998876 32 1111 2 1 223578999999999964 3 45556667788888888
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++||.|+++.|+|..+...++..|++++.++ ..|++.+++.+++ .+++++++++++||||...+.++|.
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK-----HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence 899999999999999988888888999998876 2578888888864 4578888889999999999999999
Q ss_pred HHHcC-CCeEEEccCCccccCC--Cchhhh--hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----C
Q 014594 242 KILEM-PILVVLDEAYTEFSGL--ESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y 312 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~--~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~ 312 (422)
++++. |+++|+|++|...... +..... ....+.+++++|+||.++.+| ||+++++++++.+.....+ .
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~ 232 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST 232 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence 99997 9999999999753221 111111 123467899999999998655 9999999988887665433 2
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
+.++..+.++.++|+.....+ .+++++++++.+.+.|.+++.....+.++.+.++.++++.+.+++.+.|.++||.+++
T Consensus 233 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~ 312 (349)
T cd06454 233 SLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQA 312 (349)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEE
Confidence 456666777777775432234 7889999999999999887643333334444445444345678899999988999987
Q ss_pred CCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 392 YNNK---ELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 392 ~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+... ...+++||+++ +.++++++.++|+.+
T Consensus 313 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 313 IRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 5431 22579999986 455666666666543
No 130
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=1.1e-27 Score=236.77 Aligned_cols=316 Identities=17% Similarity=0.157 Sum_probs=231.9
Q ss_pred CCCCeEEcCCC-CCCCCCCHHHHHHHhc-CC-C------CCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDAN-ENPYGPPPEVREALGQ-LK-F------PYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~------~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
++..+++++.+ .-.+...|++++++.+ +. + ...| +.+...+|++++++++|. +.+++++|+++|+..
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~sG~~An~~ 129 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--ESCLLCQSGWAANVG 129 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 45678899776 4566778999888765 21 1 1222 223467899999999996 457889999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++++.+||.|++..+.|......++..|++++.++ ..|++.+++.+++.++++|++++|+||||.+.|.+++.
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-----HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEec-----CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 9999999999999999999877777777898887665 35899999999744688899999999999999999999
Q ss_pred HHHcC-CCeEEEccCCccccCCCc---hhhhhhcC-CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C--
Q 014594 242 KILEM-PILVVLDEAYTEFSGLES---RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y-- 312 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~~-~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~-- 312 (422)
++++. |+++|+||+|.....+.. .....+.. ..++++.|+||.+| .|+||+++++++++.+.....+ +
T Consensus 205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~~~~~~ 281 (407)
T PRK07179 205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYPAIFSS 281 (407)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence 99987 999999999985432221 12222211 23588899999886 2699999999988887655433 2
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
+.++....++.++++.....+ .+++++++++++.+.|+++++ .+. +.++++++.++...+.+.+.+.|.++||.+..
T Consensus 282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~ 359 (407)
T PRK07179 282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELGY-NIR-SESQIIALETGSERNTEVLRDALEERNVFGAV 359 (407)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence 333444444445554322223 778899999999999998863 443 56788888875333557788889999998654
Q ss_pred CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 392 YNN---KELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 392 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
... ....+++||+++ +.++++++.++|+.
T Consensus 360 ~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 360 FCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred ecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 322 223589999998 56677777777654
No 131
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.1e-28 Score=238.18 Aligned_cols=279 Identities=19% Similarity=0.179 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCCC
Q 014594 131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 131 ~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~ 202 (422)
..++|+.++++++.+ ++++++++|+++++..++.++.. +||+|+++.++|... ...++..|++++.++.+++
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 457999999999987 78999999999999999999877 899999999999763 3455578999999998777
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
+.+|++++++.+. +++++|++++|+||||.+.+.+++.++++. |+++++|++|...... . .....+..+++.|+
T Consensus 125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---~-~~~~~~~d~~~~s~ 199 (373)
T cd06453 125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---V-DVQDLGCDFLAFSG 199 (373)
T ss_pred CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---e-eccccCCCEEEecc
Confidence 7899999999997 589999999999999999999999999987 9999999998743211 1 11122345777889
Q ss_pred hhhhccccccceeeecCHHHHHHHHHhcCC-----------------------CCCcHHHHHHHH---HHccCChHHHHH
Q 014594 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----------------------YNVSVAAEVAAC---AALQNPIYLEVK 335 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~aa~---~~L~~~~~~~~~ 335 (422)
+|.++. .++|++++++++++.+...... .+++.....++. ..+.+.++.+++
T Consensus 200 ~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~ 277 (373)
T cd06453 200 HKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA 277 (373)
T ss_pred ccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence 998874 5689999999988876543210 123333333333 334443432377
Q ss_pred HHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEE
Q 014594 336 EALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVS 404 (422)
Q Consensus 336 ~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis 404 (422)
++.++.++++.+.|++++.+.+.. ..++++++.++ +.+.+++.+.|.++||.+..+.. .+.+++|||+
T Consensus 278 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis 356 (373)
T cd06453 278 AHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE-GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRAS 356 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC-CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEE
Confidence 888899999999999987655432 24667888886 46788999999999999986653 2246899999
Q ss_pred ec---ChhhHHHHHHH
Q 014594 405 VG---KPEHTDALMEC 417 (422)
Q Consensus 405 ~~---~~~~~~~l~~a 417 (422)
++ +.+++|++.++
T Consensus 357 ~~~~~t~~di~~~~~~ 372 (373)
T cd06453 357 FGLYNTEEEIDALVEA 372 (373)
T ss_pred ecCCCCHHHHHHHHhh
Confidence 98 44455554443
No 132
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=6.8e-28 Score=236.76 Aligned_cols=316 Identities=16% Similarity=0.153 Sum_probs=224.8
Q ss_pred CCCCeEEcCCCC-CCCCCCHHHHHHHhcC-C-CC---CCCC-Ccch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANE-NPYGPPPEVREALGQL-K-FP---YIYP-DPES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~-~-~~---~~y~-~~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.+++++||+.++ ..++++|.+.+++.+. . .. ..|. ..|. .++++.++++++. ++.+++++|+ +++..
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~-~a~~~ 108 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGF-NTNQG 108 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence 467899999886 5677888888877652 1 21 2232 2243 4555555566674 4568888775 56667
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e 238 (422)
++.+++++||.|+++.|+|..+...+...|++++.++ .+|++++++.+.+ +++++|++++++||||.+.+.+
T Consensus 109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~ 183 (385)
T TIGR01825 109 VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLP 183 (385)
T ss_pred HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHH
Confidence 8888899999999999999988877778888887764 5788888887753 3688888889999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCC--Cc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~--~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~- 312 (422)
++.++++. |+++|+||+|..+..+ +. .....+ ..+.+++++||||.++++| ||+++++++++.+.....++
T Consensus 184 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~ 260 (385)
T TIGR01825 184 EIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPFL 260 (385)
T ss_pred HHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCcccc
Confidence 99999987 9999999999876432 11 111111 2567899999999997665 99999999999887654432
Q ss_pred ---CCcHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594 313 ---NVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 388 (422)
Q Consensus 313 ---~~~~~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~ 388 (422)
..++..+.++.++++.. ++.+..+++.++++++.+.|++++. .+.++.++++++.++...+.+++++.|+++||.
T Consensus 261 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 339 (385)
T TIGR01825 261 FSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLGY-DTGGSETPITPVVIGDEKAAQEFSRRLFDEGIF 339 (385)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCcE
Confidence 23556677777777532 2223666777889999999988763 444455667777665333567899999988999
Q ss_pred EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 389 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 389 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+++...+ ...+++|+++. ++++.+++.++++
T Consensus 340 v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~ 376 (385)
T TIGR01825 340 AQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYE 376 (385)
T ss_pred EcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence 8643322 23478999875 3444444444443
No 133
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=1.2e-27 Score=239.40 Aligned_cols=319 Identities=17% Similarity=0.165 Sum_probs=232.6
Q ss_pred CCCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCCCC-------C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-L-KFPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~~~-------y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.++++++|.++. ..+..+|++.+++.+ + .++.+ | +.....+|+++|+++++. ++.|++++|++ ++..
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s 184 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS 184 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence 457889999774 466778999888765 2 22222 3 233578999999999995 57899998887 5677
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---c-----CCC-eEEEEeCCCCccC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG 232 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~-----~~~-~~i~l~~p~NPtG 232 (422)
++.+++++||.|++....|..+.......|.+++.++.+ |.+.++..++ + .++ ++|++++++|++|
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G 259 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG 259 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence 888899999999988887777777778889999998843 3344444332 1 234 6888889999999
Q ss_pred cCCCHHHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (422)
Q Consensus 233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~ 306 (422)
.+.+.+++.+|++. |+++|+||+|..+..+.. .....+ ..+.++++.||||.+|++| ||+++++++++.+.
T Consensus 260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~ 336 (481)
T PLN02822 260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR 336 (481)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence 99999999999987 999999999996554321 112221 1355789999999999888 99999999999887
Q ss_pred HhcCC--CC--CcHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCC-----C-
Q 014594 307 RAKQP--YN--VSVAAEVAACAALQNPI-YLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----D- 374 (422)
Q Consensus 307 ~~~~~--~~--~~~~~~~aa~~~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~-----~- 374 (422)
..... |+ .++..+.++.++|+..+ +.+.+++++++++++.+.|+++.++.+ .++.++++++.+++.. +
T Consensus 337 ~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~ 416 (481)
T PLN02822 337 LSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDL 416 (481)
T ss_pred hcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchH
Confidence 55443 43 34677788878886432 223888999999999999998743443 4678889999986320 1
Q ss_pred --HHHHHHHHH-hCCcEEEeCCC--CC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 375 --AKKLKDDLA-KMGVMIRHYNN--KE---LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 375 --~~~~~~~L~-~~gI~v~~~~~--~~---~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..++++.|+ ++||.+.++.. .+ .+.++||+++...+.++|.+++++|
T Consensus 417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l 471 (481)
T PLN02822 417 SLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESL 471 (481)
T ss_pred HHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 357888987 88999997643 11 2457999987433335555555544
No 134
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=1e-27 Score=232.88 Aligned_cols=308 Identities=13% Similarity=0.110 Sum_probs=229.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCC---CCCcchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 104 ENPYGPPPEVREALGQLKFPYI---YPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~---y~~~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
..|..+++.+++++.. ...++ |+ ....++|+.+++++|++++ .|++++|+++++..++..++.++|+|++..+
T Consensus 5 p~p~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~ 82 (355)
T TIGR03301 5 PGPLSTSATVRDAMLV-DWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN 82 (355)
T ss_pred CCCCCCCHHHHHHhhh-hccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence 3466778899999986 22222 32 2367899999999999765 5778999999999999999988888665554
Q ss_pred -Cchh-HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594 179 -TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (422)
Q Consensus 179 -~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De 254 (422)
.|+. +...++..|.+++.++.++++.+|++++++.+++ .+++++++++++||||...+.++|.++++. ++++|+|+
T Consensus 83 ~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~ 162 (355)
T TIGR03301 83 GAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDA 162 (355)
T ss_pred CchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEe
Confidence 5543 5667788999999999877789999999999864 356788888999999999999999999987 99999998
Q ss_pred CCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh-------------------cCCCCC
Q 014594 255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA-------------------KQPYNV 314 (422)
Q Consensus 255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~-------------------~~~~~~ 314 (422)
+++.... + ..+...+..+++.|++|.+ |++| +||+++++++++.+... ...+++
T Consensus 163 ~~s~g~~-~---~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 236 (355)
T TIGR03301 163 MSSFGAI-P---IDIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP 236 (355)
T ss_pred ccccCCc-c---cchhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC
Confidence 7764321 1 1222345668899999976 4455 79999999998876521 123566
Q ss_pred cHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCC--CCHHHHHHHHHhC
Q 014594 315 SVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG--MDAKKLKDDLAKM 385 (422)
Q Consensus 315 ~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~--~~~~~~~~~L~~~ 385 (422)
+...+.++.++++ +.++.+ .+++++++++++.+.|+++++..+.+. .+.++++++|.. .+.+++.+.|.++
T Consensus 237 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (355)
T TIGR03301 237 PTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKER 316 (355)
T ss_pred cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHC
Confidence 7777666655554 233244 778889999999999998864323232 244678888742 4567899999999
Q ss_pred CcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 386 GVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
||.+.++.... .+++||++. +.++++++.++|+.
T Consensus 317 gi~i~~~~~~~-~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 317 GFVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred CEEEECCcccc-ccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99999876432 379999974 56667777777654
No 135
>PRK07049 methionine gamma-lyase; Validated
Probab=99.97 E-value=4.6e-28 Score=238.87 Aligned_cols=218 Identities=17% Similarity=0.202 Sum_probs=179.5
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 199 (422)
.+|+++....|+++|+++.+. +++++++|+++++..++.+++++||.|+++.|+|..+...+ ...|++++.++.
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 668889899999999999984 47888899999999999999999999999999999886653 457999887762
Q ss_pred CCCCCCCHHHHHHHhh----cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-------CCeEEEccCCccccCCCchhhh
Q 014594 200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW 268 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~----~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-------~~~li~Deay~~~~~~~~~~~~ 268 (422)
..|++.+++.+. ++++|+|++++|+||||.+++.+++.+|++. ++++|+||+|..+.... ..
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl-- 228 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL-- 228 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence 356777776663 3579999999999999999999999999875 68999999987543211 11
Q ss_pred hhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH-HHHHHHHHHHH
Q 014594 269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE-VKEALIKERER 344 (422)
Q Consensus 269 ~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~ 344 (422)
..+.++++.|+||.++ .+|+|+||+++++++++.+...+..++ ++++.+.++...|+ .+. +.++..++++.
T Consensus 229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~---tl~~R~~~~~~~a~~ 303 (427)
T PRK07049 229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLE---TLVLRMERANRNARA 303 (427)
T ss_pred --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---hHHHHHHHHHHHHHH
Confidence 3356799999999998 699999999999999999887776654 78888888887775 344 66777999999
Q ss_pred HHHHHccCCCC
Q 014594 345 LFKLLKDVPFL 355 (422)
Q Consensus 345 l~~~L~~~~~~ 355 (422)
+.+.|++++.+
T Consensus 304 la~~L~~~p~V 314 (427)
T PRK07049 304 VAEFLRDHPKV 314 (427)
T ss_pred HHHHHHhCCCc
Confidence 99999988654
No 136
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=2.5e-28 Score=240.70 Aligned_cols=317 Identities=18% Similarity=0.202 Sum_probs=218.7
Q ss_pred CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++++||+..+ .+.++. +|.+.+++.+ +.. ...|+.+...++.+.++++.+. +++++++|++++++.++
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al 113 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI 113 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence 457789999887 345665 5888888876 221 1345555566788888887664 79999999999999999
Q ss_pred HHhcCCC-------CEEEEcCCCchhHHHHHHHcCCEE-EE---ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAV-VK---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+.+...+ ++|+...++|+.+...+...+... .. .+...++ ..|++++++.+. +++++|++++++
T Consensus 114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~ 192 (396)
T PRK02627 114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ 192 (396)
T ss_pred HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence 9665433 679999999987765554433222 11 1111221 228999999996 689999999999
Q ss_pred CccC-cCCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 229 NPtG-~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
||+| .+++.+.+++|.+. |+++|+||+|.+|...+.. .......++ +.+|||.++ +|+|+||+++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~ 268 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV 268 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence 9999 67787766666553 9999999999988644321 112222233 336999999 99999999999999
Q ss_pred HHHHHHh--cCCCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594 302 IEYLWRA--KQPYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 375 (422)
Q Consensus 302 ~~~l~~~--~~~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~ 375 (422)
++.+... ...++.+++.+.++.++|+.. ++.+ .++.....++.+.+.+.+++.+...+..|.|+|++++ .+.
T Consensus 269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~ 346 (396)
T PRK02627 269 ADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD--RPA 346 (396)
T ss_pred HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec--CcH
Confidence 8887642 345788999999999998742 3333 3333344444444444444433334567889999983 468
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.+.|.++||.+.++. .+++||+++...+.+++++++++|
T Consensus 347 ~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l 388 (396)
T PRK02627 347 AEIVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRL 388 (396)
T ss_pred HHHHHHHHHCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHH
Confidence 899999998999999865 478999865222234455555443
No 137
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=2.4e-27 Score=233.37 Aligned_cols=300 Identities=16% Similarity=0.065 Sum_probs=227.1
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
+..|...+++|++++......++.+.. -..++++.+++++|.+. +.+++++|++++++.++..++++||+|++.++.
T Consensus 14 ~pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~ 93 (401)
T PLN02409 14 VPGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIG 93 (401)
T ss_pred cCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 345667789999999874332332322 25678888888899865 468999999999999999999999999999998
Q ss_pred chhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHH--HcC-CCeEE
Q 014594 180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVV 251 (422)
Q Consensus 180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i--~~~-~~~li 251 (422)
|... ...++..|++++.++.+++..+|++++++.+++ +++++|+++|++||||.++|.+++.++ ++. |+++|
T Consensus 94 ~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~v 173 (401)
T PLN02409 94 QFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLL 173 (401)
T ss_pred chhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEE
Confidence 8644 466777899999999776667899999999974 379999999999999999999999999 876 99999
Q ss_pred EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--------------------C
Q 014594 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------------P 311 (422)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--------------------~ 311 (422)
+|++++... ..-.+...+.++++.|.+|.++.| .++||++++++.++++..... +
T Consensus 174 vD~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
T PLN02409 174 VDGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWP 248 (401)
T ss_pred EEcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCC
Confidence 999987321 111122345558888889988643 369999999998887653210 3
Q ss_pred CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC---c-eEEEEEeCCCCCHHHHHHHHH-
Q 014594 312 YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA- 383 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~f~~~~~~~~~~~~~~~~~L~- 383 (422)
++++...+.++.++++. ....+ +++++++.++++.+.|++++.....+.. . ..+++.+|++.+++++.+.|.
T Consensus 249 ~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~ 328 (401)
T PLN02409 249 YTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWK 328 (401)
T ss_pred CCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHHHHHHHH
Confidence 35666666777776654 23345 8889999999999999888643222221 2 345688887888899988886
Q ss_pred hCCcEEEeCCCCCCCCeEEEEecC
Q 014594 384 KMGVMIRHYNNKELKGYVRVSVGK 407 (422)
Q Consensus 384 ~~gI~v~~~~~~~~~~~iRis~~~ 407 (422)
++||.+..|.....+..|||+...
T Consensus 329 ~~~i~i~~G~~~~~~~~~Rig~~g 352 (401)
T PLN02409 329 KYNLSLGLGLNKVAGKVFRIGHLG 352 (401)
T ss_pred hCCEEEEcCCCcccCCEEEEcCCC
Confidence 889999988765457899999754
No 138
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=2.1e-27 Score=231.90 Aligned_cols=310 Identities=13% Similarity=0.088 Sum_probs=227.5
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
...|.++++.+++++..... ++.+.. ...++|+.+++++|.++ +.|++++|+++++..++.++..+||.|++..+
T Consensus 10 ~pgP~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~ 88 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDWG-SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDN 88 (368)
T ss_pred cCCCCCCCHHHHHHhCCCCC-CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence 34677778999999876322 222222 46789999999999864 45889999999999999999999999999888
Q ss_pred CchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594 179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (422)
Q Consensus 179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De 254 (422)
+|... ...++..|++++.++.++++.+|++++++.+++ .++++++++||+||||...|.+++.++++. |+++|+|+
T Consensus 89 ~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa 168 (368)
T PRK13479 89 GAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDA 168 (368)
T ss_pred CchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEc
Confidence 77554 467788999999999876778999999999863 357789999999999999999999999987 99999996
Q ss_pred CCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhcCC-------------------CCC
Q 014594 255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNV 314 (422)
Q Consensus 255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~~~-------------------~~~ 314 (422)
++ .+...+ . .+...+..+++.|++|.+ |.+| +||+++++++++.+.....+ +++
T Consensus 169 ~~-~~g~~~--~-~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 242 (368)
T PRK13479 169 MS-SFGAIP--I-DIAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTP 242 (368)
T ss_pred cc-ccCCcc--c-cccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCC
Confidence 55 443221 1 122234457778999964 6677 69999999988876543221 355
Q ss_pred cHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--Cce-EEEEEeCC--CCCHHHHHHHHHhC
Q 014594 315 SVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSN-FILCEVTS--GMDAKKLKDDLAKM 385 (422)
Q Consensus 315 ~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~-f~~~~~~~--~~~~~~~~~~L~~~ 385 (422)
+...+.++.++++ +.++.+ .++++.++++++.+.|+++++....++ ..+ .+.+.++. +.+.+++.+.|.++
T Consensus 243 ~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (368)
T PRK13479 243 PTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQ 322 (368)
T ss_pred cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHC
Confidence 5555445544443 334455 778999999999999999875433222 122 23344443 25788999999999
Q ss_pred CcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014594 386 GVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~ 420 (422)
||.++++... ..+++||+. + +.++++.+.++|++
T Consensus 323 gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 323 GFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred CEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 9999887532 246899985 6 66777777777764
No 139
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=9.8e-28 Score=236.51 Aligned_cols=314 Identities=18% Similarity=0.191 Sum_probs=227.9
Q ss_pred CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~ 162 (422)
.++++++||.++ .+.++. +|++.+++.+ +. . ...|+.+...+|.+.++++++.+ ++++++++|+++++..+
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a 119 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA 119 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence 457789999886 456666 6888888775 22 1 23576666678999999998853 47999999999999999
Q ss_pred HHHhcCCC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
++....+| +.|+...++|+.+...+.. .|.. +..+| ..|++.+++.+. +++++|++++++
T Consensus 120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~~-~~~~aviiep~~ 193 (398)
T PRK03244 120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP-----YGDVDALAAAVD-DDTAAVFLEPIQ 193 (398)
T ss_pred HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC-----CCCHHHHHHhhc-CCeEEEEEeccc
Confidence 99766666 5677778899866544432 2221 22222 137899999886 689999999999
Q ss_pred CccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 229 NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
||+|.+++ .+++.++|+. |+++|+||+|..|...+... ......+++ .+|||.++ +|+|+||+++++++
T Consensus 194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~ 269 (398)
T PRK03244 194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA 269 (398)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence 99999998 5677778876 99999999998876544322 111222333 37899998 89999999999998
Q ss_pred HHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--CcccCCCceEEEEEeCCCCCHHH
Q 014594 302 IEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 302 ~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
++.+.. ....|+.+++.+.++.++|+.-+..+..++++++++++.+.|++++. +......|+++|++++. ..+..
T Consensus 270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~~ 348 (398)
T PRK03244 270 ADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAKA 348 (398)
T ss_pred HhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHHH
Confidence 887764 23357889999999999976311111556777778888899988543 22234678999999963 35678
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+.|.++||.+++.. .+++||++. +.++++++.+++++
T Consensus 349 ~~~~l~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~ 390 (398)
T PRK03244 349 VEAAAREAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPA 390 (398)
T ss_pred HHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 9999999999998743 478999954 45555555555543
No 140
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=2.3e-27 Score=237.76 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=223.0
Q ss_pred CCCeEEcCCCC-CCC-----CCCHHHHHHHhcCCC---C--CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 94 PEDIVKIDANE-NPY-----GPPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 94 ~~~~i~l~~~~-~~~-----~~~~~v~~al~~~~~---~--~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+.++|++++ -.+ .+.+.+.+++.+... + ..|+ .....++++++|+++| .++.|++++|.... ..
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an-~~ 176 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATN-ST 176 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHH-HH
Confidence 46678887753 122 234677778776431 1 2254 4568899999999999 46678887775544 46
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCC-----eEEEEe-CCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNN 229 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i~l~-~p~N 229 (422)
++.+++++||.|++++|+|..+...++..|++++.++.+ |++.+++.+++ +++ ++++++ +..|
T Consensus 177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 777799999999999999999999999999999999843 45666555431 222 555555 5679
Q ss_pred ccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC---chhhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
++|.+.+.+++.++++. ++++|+||+|.....+. ...... ...+.+++++||||++|+.| ||+++++++++
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~ 328 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ 328 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence 99999999999999997 99999999998433221 112222 22466899999999998777 99999999999
Q ss_pred HHHHhcCC--C--CCcHHHHHHHHHHcc-----C-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC
Q 014594 304 YLWRAKQP--Y--NVSVAAEVAACAALQ-----N-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG 372 (422)
Q Consensus 304 ~l~~~~~~--~--~~~~~~~~aa~~~L~-----~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~ 372 (422)
.+...... + +.++....++.++|+ + .++.. ++++++++++++.+.|+++++....+.++..+++.+...
T Consensus 329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~ 408 (489)
T PLN02483 329 YLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP 408 (489)
T ss_pred HHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCH
Confidence 99876432 2 234444434445442 2 13334 778899999999999999864323345566777776533
Q ss_pred CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+..++.+.|+++||.+.+... +...+.+||+++...+.++|++++++|
T Consensus 409 ~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L 460 (489)
T PLN02483 409 AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVI 460 (489)
T ss_pred HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4567899999999999996332 233578999997533335566655554
No 141
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=4.8e-27 Score=230.35 Aligned_cols=318 Identities=19% Similarity=0.182 Sum_probs=230.3
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcCCCC--------CCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQLKFP--------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~~--------~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..++|+|+--.---++++.+++++.+.... +.+. .+...++|+.+++++|.+ ++++++|+++++..+
T Consensus 17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a 94 (387)
T PRK09331 17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV 94 (387)
T ss_pred cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence 356788876555556678888988763211 1111 224689999999999974 688899999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcC
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~ 234 (422)
+.+++++||+|+++.++|......++..|++++.++. ++++.+|++.+++.+++ +++++|++++|+||||.+
T Consensus 95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~ 174 (387)
T PRK09331 95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL 174 (387)
T ss_pred HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence 9999999999999999987766677889999999997 66788999999999864 278999999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~ 313 (422)
.+.+++.++++. |+++|+|++|+....... ....+..+++.|++|.++ ++.|+||+++++++++.+.+...+|.
T Consensus 175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~----~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~ 249 (387)
T PRK09331 175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVD----GKKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFG 249 (387)
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCcCCC----HHHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCc
Confidence 999999999987 999999999984321111 112345688999999987 55689999999999888765433221
Q ss_pred ----------CcHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCceEEEEEeCC--------
Q 014594 314 ----------VSVAAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS-------- 371 (422)
Q Consensus 314 ----------~~~~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~f~~~~~~~-------- 371 (422)
.+.....++.++++. .+..+..++..++.+++++.|++++++.+. ++..+++.++.|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 329 (387)
T PRK09331 250 VKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKH 329 (387)
T ss_pred ccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhc
Confidence 211222323333321 122234455667788999999999555554 4456677777651
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l 421 (422)
..+..++.+.|.++||...+. +....+|+.. + +.++++++.++|+.+
T Consensus 330 ~~~~~~~~~~L~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i 378 (387)
T PRK09331 330 KRRGFFLYEELKKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEI 378 (387)
T ss_pred cccchhHHHHHHHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHH
Confidence 123356889999999984332 2356788876 4 566777788877654
No 142
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=4.8e-27 Score=232.28 Aligned_cols=317 Identities=19% Similarity=0.176 Sum_probs=228.4
Q ss_pred CCCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
++++++|+++ .-.++++|++.+++.+ +. ++. .| +.+...+|++++++++|. ++.+++++| .++...+
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG-~~an~~a 122 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSG-YVSNDAT 122 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHHHH
Confidence 3568899776 4677889999988875 21 111 13 344578999999999994 455555555 5676666
Q ss_pred HHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594 163 MRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 163 ~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (422)
+..++. +++.|+.....|......++..|+++..++. .|++.+++.++. +++++|++++++||+|.+.+.
T Consensus 123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l 197 (407)
T PRK09064 123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPI 197 (407)
T ss_pred HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCH
Confidence 676554 7776766666666665666777887766652 377888877752 468999999999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCcc--ccCCCchh-hhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC
Q 014594 238 EDLLKILEM-PILVVLDEAYTE--FSGLESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~--~~~~~~~~-~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~ 312 (422)
+++.++++. |+++|+||+|.. +...+... ...+. .+.+++++||||+||++| ||+++++++++.+.....++
T Consensus 198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~ 274 (407)
T PRK09064 198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGF 274 (407)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCccc
Confidence 999999987 999999999973 32222221 11111 234788999999999887 99999999999887655443
Q ss_pred ----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594 313 ----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG 386 (422)
Q Consensus 313 ----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g 386 (422)
+.++..+.++.++++.-+... .+++++++++++.+.|+++++ .+.++.++++++.++...++.++.+.|. ++|
T Consensus 275 ~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~g 353 (407)
T PRK09064 275 IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI-PVMPNESHIVPVMVGDPEKCKKASDMLLEEHG 353 (407)
T ss_pred cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 456667777777765422223 567888999999999998864 4556678888888753335678888887 569
Q ss_pred cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
|.+++...+. ..+++||+++ +.++++++.++|+++
T Consensus 354 i~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 354 IYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred EEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9998765432 3478999998 778888888887753
No 143
>PLN02242 methionine gamma-lyase
Probab=99.96 E-value=2.8e-27 Score=232.41 Aligned_cols=244 Identities=15% Similarity=0.163 Sum_probs=190.5
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-----HHcCCEEEEecCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK 200 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~~v~~~ 200 (422)
++++...+|++.+++++|. +.+++++|+++++..++.+++++||+|+++.|.|..+.... +..|++++.++.
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~- 149 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI- 149 (418)
T ss_pred CCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence 3677889999999999996 46788999999999999999999999999999998775543 347888877763
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|++++++++++.++|+|++++|+||||.+.+.+++.++++. |+++|+|++|..+...+. ..+.++++.
T Consensus 150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~------~~g~divv~ 219 (418)
T PLN02242 150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPA------RLGADVVVH 219 (418)
T ss_pred ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHH------HcCCcEEEE
Confidence 389999999973359999999999999999999999999987 999999999987654221 224569999
Q ss_pred cChhhhcccccc-ceeeecCHHHHHHHHHhcC----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 280 S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
||||.++.+|.+ .||+++++++++.+..... ..+.+...|.++..++... .+. +.++++++++.+.+.|++++
T Consensus 220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~-tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP-HLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999888887 5999999999998886643 2444555667666666544 555 77899999999999999986
Q ss_pred CCcccCC-------------------CceEEEEEeCCCCCHHHHHHHHH
Q 014594 354 FLNPYPS-------------------YSNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 354 ~~~~~p~-------------------~~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
....+|. .|..+.+++.....+..|++.|.
T Consensus 299 ~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~ 347 (418)
T PLN02242 299 LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ 347 (418)
T ss_pred CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh
Confidence 4223342 23456677742223456666664
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=6e-27 Score=231.14 Aligned_cols=316 Identities=22% Similarity=0.209 Sum_probs=227.2
Q ss_pred CCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
+++++|++| ...++.+|++++++.+ +. ++. .| ..+...+|++++++++|. + ..++.+++++++..++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~-~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-E-SALVFTSGYVANDATL 122 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-C-eEEEECchHHHHHHHH
Confidence 557888776 5678889999988865 21 221 12 233467899999999994 3 4555566688888888
Q ss_pred HHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e 238 (422)
..+.. +++.|+.....|......+...|+++..++. .|++++++.++. .++++|++++|+||+|.+.+.+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~ 197 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE 197 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 87765 6777776666676666667778888766652 367777777652 3678999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCC--ch-hhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLE--SR-MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~--~~-~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~- 312 (422)
++.++++. |+++|+||+|....+++ .. ....+. .+.+++++||||++|++| ||+++++++++.+.....++
T Consensus 198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~ 274 (402)
T TIGR01821 198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI 274 (402)
T ss_pred HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence 99999987 99999999998433221 11 111111 233688899999999888 99999999999887655442
Q ss_pred ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594 313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI 387 (422)
+.++..+.++.++|+..+... .++++.++++++.+.|+++++ .+.++.++++.+.++....+.++.+.|. ++||
T Consensus 275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi 353 (402)
T TIGR01821 275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGI-PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGI 353 (402)
T ss_pred ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence 467778888888876532113 566677889999999998864 4456678888887753234567888887 5699
Q ss_pred EEEeCCCC---CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK---ELKGYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~---~~~~~iRis~---~~~~~~~~l~~al~~l 421 (422)
.+++...+ ...+++||++ .+.++++++.++++.+
T Consensus 354 ~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~ 393 (402)
T TIGR01821 354 YVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV 393 (402)
T ss_pred EEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 99875432 3347999998 4667778887777653
No 145
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=7.3e-27 Score=228.70 Aligned_cols=318 Identities=15% Similarity=0.161 Sum_probs=226.9
Q ss_pred CCCCeEEcCCCCC--CCCCCH---HH----HHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 93 KPEDIVKIDANEN--PYGPPP---EV----REALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 93 ~~~~~i~l~~~~~--~~~~~~---~v----~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.+.+++.|.+++. ++.++. .+ .++|..-+ ..| ++.+..+||+++++++|. +++++++|+++|+.++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd--~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la 84 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD--EAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL 84 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC--CccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence 4456678888776 554432 33 33333212 347 667899999999999996 5899999999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcC---CCeEEEEeCCCC
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN 229 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N 229 (422)
+.++++|||.| +++|.|..+.......|++++.++.+. .+.+|+++|++.+++. ++++|++++|+|
T Consensus 85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N 163 (431)
T cd00617 85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN 163 (431)
T ss_pred HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence 99999999987 689999999888899999999998642 2449999999999732 388999999999
Q ss_pred cc-CcCCCHHHHHHHHc---C-CCeEEEccCCcc----cc------CCCchhhhhhcCCcEEEEccChhhhcccccc---
Q 014594 230 PD-GSIINDEDLLKILE---M-PILVVLDEAYTE----FS------GLESRMEWVKKHDNLIVLRTFSKRAGLAGLR--- 291 (422)
Q Consensus 230 Pt-G~~~~~e~l~~i~~---~-~~~li~Deay~~----~~------~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r--- 291 (422)
|+ |.+++.+++++|++ . |++||+|+++.. |. +.+..+. +.++.+.|++|.+.+.|+|
T Consensus 164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS~~K~~~ 238 (431)
T cd00617 164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMSAKKDGL 238 (431)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEEeecCCC
Confidence 98 99999987765554 4 999999999642 11 1111111 1234567788888888887
Q ss_pred ---ceeeecCH-HHHHHHHHhcCC-------CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC
Q 014594 292 ---VGYGAFPL-SIIEYLWRAKQP-------YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP 359 (422)
Q Consensus 292 ---~G~i~~~~-~~~~~l~~~~~~-------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p 359 (422)
.||+++++ +++++++..... .+.+.....++..+|++....+ +.+++ ++++++.+.|++.|+..+.|
T Consensus 239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~-~~r~~l~~~L~~~G~~v~~P 317 (431)
T cd00617 239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRV-EQVRYLGDRLDEAGVPIVEP 317 (431)
T ss_pred CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHH-HHHHHHHHHHHHCCCCccCC
Confidence 67999986 688888753311 1234444444444665421123 33344 35699999999988666778
Q ss_pred CCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEe-CC------CCC------CCCeEEEEec----ChhhHHH
Q 014594 360 SYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRH-YN------NKE------LKGYVRVSVG----KPEHTDA 413 (422)
Q Consensus 360 ~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~-~~------~~~------~~~~iRis~~----~~~~~~~ 413 (422)
.+++|+|++.+. ..++.+++..|. +.||.+.. |. ... .-..+|+++. +.+++|.
T Consensus 318 ~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~ 397 (431)
T cd00617 318 AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDY 397 (431)
T ss_pred CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHH
Confidence 999999999762 235888887766 88999763 22 111 1368999975 5677888
Q ss_pred HHHHHhhh
Q 014594 414 LMECLMHL 421 (422)
Q Consensus 414 l~~al~~l 421 (422)
+.+++..+
T Consensus 398 ~~~~~~~~ 405 (431)
T cd00617 398 VAAAVIAL 405 (431)
T ss_pred HHHHHHHH
Confidence 88887764
No 146
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.5e-27 Score=234.05 Aligned_cols=313 Identities=19% Similarity=0.187 Sum_probs=224.0
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-CC-------CCCCCCcchHHHHHHHHHHc---CC-CCCCEEEeCCHHHHHHHHHHHh
Q 014594 99 KIDANENPYGPPPEVREALGQL-KF-------PYIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~-------~~~y~~~~~~~lr~~la~~~---~~-~~~~i~~~~G~~~al~~~~~~l 166 (422)
.|+.+.... +++.|++++.+. .. .+.|+..+...+++++++++ +. ++++|++|+|+++++..+++++
T Consensus 2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred cccCcCCCC-CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 455555544 457788888652 11 12234344566777777665 44 6789999999999999999875
Q ss_pred c-----CC-CCEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 167 L-----DP-GDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 167 ~-----~~-gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
. ++ +++|+++...|+.+. ..++..|++++.++.++++.+|++.+++.+. ++++++++++|+||||.++|.
T Consensus 81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~ 159 (382)
T TIGR03403 81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPI 159 (382)
T ss_pred HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCH
Confidence 2 45 478999887766444 3345689999999987777899999999997 689999999999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH--HHH-----HHhc
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAK 309 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~--~~l-----~~~~ 309 (422)
+++.++++. |+++++|+++..... .. .....+..+++.|++|.+|.+| +|+++++++.. ..+ ....
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~g~~---~~-~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~ 233 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAIGKI---PV-DVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGR 233 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCC---cc-CccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCc
Confidence 999999987 999999999873221 11 1223334588899999877677 57777654321 111 0112
Q ss_pred CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594 310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
.+++++...+.++..+++. .++++ .++++++.++++.+.|++++++.+.++. .+++.+.++ +.+.+++...|.
T Consensus 234 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~ 312 (382)
T TIGR03403 234 RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK-GVEGEAMLWDLN 312 (382)
T ss_pred ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC-CCCHHHHHHhhc
Confidence 3467888888777777754 24456 7789999999999999988766654332 457777775 567888888888
Q ss_pred hCCcEEEeCCCC---C----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNNK---E----------------LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~~---~----------------~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++||.++.|... . ..+.||+|+. +.+|+|++.++|+.
T Consensus 313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 999999965321 0 1367999986 56667777777654
No 147
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.1e-26 Score=211.96 Aligned_cols=331 Identities=18% Similarity=0.262 Sum_probs=245.6
Q ss_pred CCCchHHHHHHhCCCC-CCeEEcCCCC--CCCC---CCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc-C----
Q 014594 79 PILPFEVLSIQLGRKP-EDIVKIDANE--NPYG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G---- 143 (422)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~i~l~~~~--~~~~---~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~-~---- 143 (422)
|.+++-.+...+..++ .+.|+|+.|. +..+ .-+.|.+|-..+ .....| |..|..++++++++++ |
T Consensus 9 p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~ 88 (396)
T COG1448 9 PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSP 88 (396)
T ss_pred CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence 5677777888877654 4579999883 3333 334555554432 334567 7789999999999985 5
Q ss_pred -CCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc
Q 014594 144 -LESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER 216 (422)
Q Consensus 144 -~~~~~i--~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~ 216 (422)
++.++| +-|.|||.||.+....+ ..+..+|.+++|+|+.+..+.+..|.++..+|. ..+..+|.+.+.+.+++
T Consensus 89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~ 168 (396)
T COG1448 89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKT 168 (396)
T ss_pred HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHh
Confidence 233443 67889999999988855 346677999999999999999999999999993 34557999999998875
Q ss_pred C-CCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chhh-hhhcCCcEEEEccChhhh
Q 014594 217 E-KPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRME-WVKKHDNLIVLRTFSKRA 285 (422)
Q Consensus 217 ~-~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~~-~~~~~~~~i~~~S~SK~~ 285 (422)
- ...+|+|. -.|||||.-++.+++.+|++. +.+.+.|-||.+|..+. ..+. ........+++.||||.|
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf 248 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF 248 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh
Confidence 3 33455554 569999999999999999885 99999999999998542 1122 222334489999999999
Q ss_pred ccccccceeeec---CHHHHHHH----HHh-cCCC-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHHH
Q 014594 286 GLAGLRVGYGAF---PLSIIEYL----WRA-KQPY-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFKL 348 (422)
Q Consensus 286 ~~~G~r~G~i~~---~~~~~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~~ 348 (422)
|+.|.|+|++.. +.+...++ ... +..| +++..+...+...|+++ +|.+ +++++.++|..+.+.
T Consensus 249 gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~ 328 (396)
T COG1448 249 GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDA 328 (396)
T ss_pred hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998665 44444433 222 2334 56677888888999985 4543 899999999999999
Q ss_pred HccC----CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594 349 LKDV----PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 421 (422)
Q Consensus 349 L~~~----~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 421 (422)
|++. .+..+..+.|+|.+. |.+.+++.+...++||++...+ |||++ +..+++.+.+++...
T Consensus 329 L~~~~~~~~f~~i~~Q~GMFsy~----Gls~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 329 LKALGAPRNFDFIISQRGMFSYT----GLSPEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHhhCCCcccchHhhcCceeecC----CCCHHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 9983 344456788888876 4567777666669999999876 99997 456678888887653
No 148
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.1e-27 Score=208.33 Aligned_cols=316 Identities=18% Similarity=0.251 Sum_probs=223.2
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc----C-------CCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ----L-------KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADE 157 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~ 157 (422)
..|.|+.|.+.. -|++.+...+ + +....|..+ |...|.+++++++ ++++++|.+|+|++.
T Consensus 31 g~imLggGNPa~--iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 31 GAIMLGGGNPAR--IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred CceeeCCCCccc--ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 368887765433 2555544432 1 112567555 7788888888875 468899999999999
Q ss_pred HHHHHHHHhcC---CC--CEEEE-cCCCchhHHHHHHHcCCEEEEec-----CCC---CCCCCHHHHHHHhhcCCCeEEE
Q 014594 158 LIDLIMRCVLD---PG--DKIVD-CPPTFTMYEFDAAVNGAAVVKVP-----RKS---DFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 158 al~~~~~~l~~---~g--d~Vl~-~~p~y~~~~~~~~~~g~~~~~v~-----~~~---~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
+..-++..|.. .| .+|++ ..|.|.+|......-. -.+.+. .+. .+++|.+++.- . +++.+|+
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i--~-e~~g~ic 184 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI--G-ESTGAIC 184 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc--c-cccceEE
Confidence 99999987643 34 23444 5788888876532211 122222 111 24678877754 2 6889999
Q ss_pred EeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcc-ccCCC-chhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE-FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~-~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
++.|.||||.+++.+|+.+|... |+.+|+|.+|.. |-.-. +... .--.+|++.|.|+|| .|+||.|+|.+++
T Consensus 185 ~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~-~~w~~NiilC~SLSK-~GLPG~R~GIiIa 262 (417)
T COG3977 185 VSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT-PLWNENIILCMSLSK-LGLPGSRCGIIIA 262 (417)
T ss_pred ecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc-ccCCCCEEEEeehhh-cCCCCcceeEEEc
Confidence 99999999999999999988654 999999999973 22100 0011 113589999999999 7999999999999
Q ss_pred CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEE
Q 014594 298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLK----DVPFLNPYPSYSNFIL 366 (422)
Q Consensus 298 ~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~ 366 (422)
++++++.+...... ..++.++++.+..+++.++.++ ++-.|+++.+...+.|+ +.++....|+++.|+|
T Consensus 263 ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlW 342 (417)
T COG3977 263 NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLW 342 (417)
T ss_pred cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeeh
Confidence 99999999876654 4556788889999998876543 44456666665555554 4455556788999998
Q ss_pred EEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 367 CEVTS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 367 ~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+.+ +.+.+++++.|+++||++.||..+ + ...|+|+++...+ ++++.++++|
T Consensus 343 LWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~--~~ie~Gva~l 405 (417)
T COG3977 343 LWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEP--EKIEKGVAIL 405 (417)
T ss_pred hhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCH--HHHHHHHHHH
Confidence 76653 578999999999999999998871 2 2569999998754 4466666554
No 149
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=2.4e-26 Score=224.89 Aligned_cols=282 Identities=19% Similarity=0.170 Sum_probs=213.6
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCC
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 204 (422)
..++++.+++++|++++++++++|+++++..++.++. ++||+|+++.++|..+...++..|++++.++.++++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~ 140 (373)
T TIGR03812 61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT 140 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence 3689999999999988899999999999988877654 4678999999999999988999999999999877788
Q ss_pred CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-----Cc-hhhhhhcCCcEEE
Q 014594 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES-RMEWVKKHDNLIV 277 (422)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-----~~-~~~~~~~~~~~i~ 277 (422)
+|++++++.+. +++..+++++|+||||.+.+.+++.++++. |+++|+|++|..+... .. ....+....-..+
T Consensus 141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~ 219 (373)
T TIGR03812 141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSI 219 (373)
T ss_pred cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEE
Confidence 99999999997 456555555689999999999999999987 9999999999855310 00 0000001122234
Q ss_pred EccChhhhccccccceeee-cCHHHHHHHHHhcCCC-----------CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHH
Q 014594 278 LRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPY-----------NVSVAAEVAACAALQN--PIYLE-VKEALIKER 342 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i~-~~~~~~~~l~~~~~~~-----------~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~ 342 (422)
..|.+| |++++.+.|+++ .++++++.+.. ..+| +.+.....++.++|+. .+..+ ..+++.+++
T Consensus 220 ~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~ 297 (373)
T TIGR03812 220 TIDPHK-MGLSPIPAGGILFRSKSYLKYLSV-DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT 297 (373)
T ss_pred EECccc-cCCCcCCceEEEEeCHHHHhhhcc-cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 457779 777888888665 57888877642 2222 2334555666666654 33445 788999999
Q ss_pred HHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 343 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 343 ~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+++.+.|+++++..+.++..+++.++++ +..++.+.|.++||.++.+. .++++||+++ +.++++++.++|+
T Consensus 298 ~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~ 371 (373)
T TIGR03812 298 RYLVEELKKIGFEPVIEPVLNIVAFEVD---DPEEVRKKLRDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLK 371 (373)
T ss_pred HHHHHHHHhCCCeEEcCCCceEEEEEeC---CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHh
Confidence 9999999998865455567788888886 35689999999999998763 2579999986 6777888888877
Q ss_pred hh
Q 014594 420 HL 421 (422)
Q Consensus 420 ~l 421 (422)
.|
T Consensus 372 ~~ 373 (373)
T TIGR03812 372 EI 373 (373)
T ss_pred hC
Confidence 54
No 150
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=1e-26 Score=229.64 Aligned_cols=315 Identities=17% Similarity=0.163 Sum_probs=220.9
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC---CCC------CCC-CCcchHHHHH----HHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQL---KFP------YIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~------~~y-~~~~~~~lr~----~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.++|..+++.. +|.+++++... .+. ..| +..+...+++ .+++++|.+..+|++++ +++++..+
T Consensus 21 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~s-gt~a~~~~ 97 (402)
T cd00378 21 TLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHS-GSQANLAV 97 (402)
T ss_pred CeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCC-cHHHHHHH
Confidence 58888877776 68999998752 111 223 2233445555 46678898766666665 57899999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHH-----HHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
+.+++++||+|+++.|+|..+... ++..|+++..++.+. ++.+|++++++.+.+++++++++++|+|| ..
T Consensus 98 l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~ 175 (402)
T cd00378 98 YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RP 175 (402)
T ss_pred HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CC
Confidence 999999999999999999755332 555787776666422 68999999999996578999999998875 56
Q ss_pred CCHHHHHHHHcC-CCeEEEccCC-ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC
Q 014594 235 INDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP 311 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~ 311 (422)
.+.+++.++++. |+++|+|++| .++.+.+.....+. ...++++|+||.+ +|+|+||+++++ ++++.+.+...+
T Consensus 176 ~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~ 251 (402)
T cd00378 176 IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFP 251 (402)
T ss_pred cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCc
Confidence 789999999987 9999999996 43332221111122 2237899999965 789999999987 898888776554
Q ss_pred C--CCc-HHHHHHHHHHccC-Ch-HHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH
Q 014594 312 Y--NVS-VAAEVAACAALQN-PI-YLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA 383 (422)
Q Consensus 312 ~--~~~-~~~~~aa~~~L~~-~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~ 383 (422)
+ +.+ ...+.++..++.. .. +.+ .+++++++++++.+.|+++++... .+.+++|+|+++++ +.+...+.+.|.
T Consensus 252 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~ 331 (402)
T cd00378 252 GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALE 331 (402)
T ss_pred cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHH
Confidence 3 222 2233332333322 12 444 778899999999999998864332 35678999999973 456677888788
Q ss_pred hCCcEEEeCCCC------CCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNNK------ELKGYVRVSVGK-------PEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~~------~~~~~iRis~~~-------~~~~~~l~~al~~ 420 (422)
++||.+.+...+ ...+++||++.. .++++++.+.|++
T Consensus 332 ~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 332 EAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred HcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999853321 134689999854 4566666666654
No 151
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=2.4e-27 Score=235.11 Aligned_cols=323 Identities=18% Similarity=0.151 Sum_probs=223.8
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCCCCc-----chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~y~~~-----~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.+++++||+..| ...++ .+|++.+++.+ +.....|+.. ...++++.++++++.+.+++++++|+++++..+
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a 112 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA 112 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence 356789999886 55666 78999988876 3333444432 367899999999987788999999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCchhHHHHHHHc-C------------CEEEEecCCC------CCCCCHHHHHHHhhc--CCC
Q 014594 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS------DFSLNVELIADAVER--EKP 219 (422)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~------~~~~d~~~l~~~i~~--~~~ 219 (422)
++.+. .++++|++.+++|+......... + .+++.+|.+. ++..|++.+++.+++ .++
T Consensus 113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 192 (413)
T cd00610 113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV 192 (413)
T ss_pred HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence 99763 56899999999998755443332 1 2355666432 234489999999874 356
Q ss_pred eEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccccee
Q 014594 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
++++++..+|++|.+++ .+++.++++. |+++|+||+|..|...+.... ....+...-+.|+||.++ .|+|+||
T Consensus 193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~-~g~~~g~ 270 (413)
T cd00610 193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLG-GGLPLGA 270 (413)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEccccc-CccccEE
Confidence 67776677788899886 5666666665 999999999998743322111 111111112458899998 4899999
Q ss_pred eecCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEE
Q 014594 295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFIL 366 (422)
Q Consensus 295 i~~~~~~~~~l--~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~ 366 (422)
+++++++++.+ .... ..++.+++.+.++.++|+.-+..+..++++++.+++.+.|+++. .....+..|.+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 350 (413)
T cd00610 271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIG 350 (413)
T ss_pred EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEE
Confidence 99999999886 2222 24677888888888777532111166677777777777776642 2222345678888
Q ss_pred EEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 367 CEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 367 ~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+.+++. .+...+.+.|.++||.+.++. .+++|++++...+.+++.+++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~ 408 (413)
T cd00610 351 IELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDA 408 (413)
T ss_pred EEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHH
Confidence 888643 356788899999999999975 57899987643223444444444
No 152
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=3.2e-26 Score=223.05 Aligned_cols=309 Identities=12% Similarity=0.033 Sum_probs=226.8
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
..|...++.|.+++.... .++-+.. -..++|+.++++++.+++ .|++|+|++++++.++.+++.+||.+++..+.
T Consensus 9 pgp~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~ 87 (363)
T TIGR02326 9 PGPLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVING 87 (363)
T ss_pred CCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 345566788888886632 1211222 256889999999998754 69999999999999999998888887776665
Q ss_pred chhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
+... ...++..|++++.++.+++..+|++++++.+++ .+++++++++++||||..+|.++|.++++. |+++|+|++
T Consensus 88 ~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~ 167 (363)
T TIGR02326 88 AYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAM 167 (363)
T ss_pred hhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcc
Confidence 5433 466788999999999877778999999999864 356788889999999999999999999987 999999988
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh--------------------cCCCCC
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------KQPYNV 314 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~--------------------~~~~~~ 314 (422)
++... .+ . .+...+..+++.|++|.+ |.+| +||++++++.++++... ...|+.
T Consensus 168 ~~~g~-~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~ 241 (363)
T TIGR02326 168 SSFGG-IP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS 241 (363)
T ss_pred ccccC-cc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence 76322 11 1 122334568889999976 4445 79999999887765321 023566
Q ss_pred cHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEeCCC--CCHHHHHHHHHhC
Q 014594 315 SVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSG--MDAKKLKDDLAKM 385 (422)
Q Consensus 315 ~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~~~~--~~~~~~~~~L~~~ 385 (422)
+...+.++.++++. ....+ ++++++++++++.+.|+++++....+ ..+..+++.+++. .+..++.+.|.++
T Consensus 242 ~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~ 321 (363)
T TIGR02326 242 PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQ 321 (363)
T ss_pred cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHC
Confidence 77777776666543 22345 88999999999999998886433222 2334567888753 5778899999999
Q ss_pred CcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014594 386 GVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~ 420 (422)
||.++++..+ ..+++||++ + +.++++++.++|+.
T Consensus 322 gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 322 GFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 9999987643 357999996 4 55566666666654
No 153
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=5.9e-26 Score=220.84 Aligned_cols=318 Identities=21% Similarity=0.255 Sum_probs=246.7
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC----CCC-C--CCCCc-----chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL----KFP-Y--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID 160 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~~~-~--~y~~~-----~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~ 160 (422)
+.+++.|++..... .|..|.+++.+. ... + .|+.. .+++.|+++++++|.++ ++|++|.|+|++++
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln 98 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN 98 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence 45679999887776 678888888762 111 1 12111 25689999999999985 89999999999999
Q ss_pred HHHHHh---cCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
.+..++ ..+||+|++..-.|+ ++...++..|++++.+|.+++..+|.+.++..++ ++||+|.+++.+|.||.
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~ 177 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT 177 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence 999998 689999999998886 5566677789999999987888999999999887 89999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChh-hhccccccceeeecCHHHHHHHHHhcC-
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~r~G~i~~~~~~~~~l~~~~~- 310 (422)
+.|.++|.++++. |+++++|.+++. +...-.+...+.++++.|..| .+|..| +|.+++++++++.+.....
T Consensus 178 ~~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~g 251 (405)
T COG0520 178 VNPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGG 251 (405)
T ss_pred cchHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccC
Confidence 9999999999998 999999999883 222233345566799999999 666446 8999999999988731100
Q ss_pred ------------------C-----CCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC--
Q 014594 311 ------------------P-----YNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PS-- 360 (422)
Q Consensus 311 ------------------~-----~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~-- 360 (422)
+ .+++.....++.++++ ... .+ +.++.++..+++.+.|++++.+.++ |.
T Consensus 252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~ 330 (405)
T COG0520 252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHERELTEYLLEGLSELPGVEIYGPPDA 330 (405)
T ss_pred CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcc
Confidence 0 1233333333344443 323 34 8888999999999999999877753 32
Q ss_pred -CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 361 -YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 361 -~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+..+.+.++ +.+..++...|.++||.++.|..+ +....+|+|+. +.+|+|+|.++|+++
T Consensus 331 ~r~~~vsF~v~-~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 331 DRGGIVSFNVK-GIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred cCceEEEEEeC-CCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 4667778876 678999999999999999987542 22456999975 788899999999875
No 154
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1.7e-26 Score=226.06 Aligned_cols=315 Identities=20% Similarity=0.204 Sum_probs=226.0
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-C-C--C---CCCCC-----cchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHH
Q 014594 99 KIDANENPYGPPPEVREALGQL-K-F--P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC 165 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~-~--~---~~y~~-----~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~ 165 (422)
.|+.+.+++++|+.+.+++.+. . . . ..|+. ....++|+.++++++.+. ++|++|+|+++++..++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 5788888888889998888652 1 1 1 12332 345689999999999854 4899999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++||+|++..+.|..+. ..++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.+++.+++.
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i~ 160 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEIG 160 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHHH
Confidence 9999999999999987643 3455579999999977777899999999996 6899999999999999999999999
Q ss_pred HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHHHh-----------
Q 014594 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRA----------- 308 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~~~----------- 308 (422)
++++. |+++|+|++++.....- .+...+.++++.|++|.++.|. ..|.++++++. ++.+...
T Consensus 161 ~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
T TIGR01977 161 ELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQ 235 (376)
T ss_pred HHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccc
Confidence 99987 99999999997533211 1123345588889999765332 36766655442 1111100
Q ss_pred -------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCccc-C----CCceEEEEEeCCCC
Q 014594 309 -------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEVTSGM 373 (422)
Q Consensus 309 -------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~f~~~~~~~~~ 373 (422)
....+.+.....++.++++. .+...++++.++..+++.+.|++++.+.+. + ..+..+++.++ +.
T Consensus 236 ~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~-~~ 314 (376)
T TIGR01977 236 PSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE-GI 314 (376)
T ss_pred cccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC-CC
Confidence 01123445445555555532 222227788889999999999887655543 2 12567778886 56
Q ss_pred CHHHHHHHHHhC-CcEEEeCCCC----------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 374 DAKKLKDDLAKM-GVMIRHYNNK----------ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 374 ~~~~~~~~L~~~-gI~v~~~~~~----------~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+++.+.|.++ ||.++.+... ...+.|||++. +.++++++.++|+.
T Consensus 315 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 315 DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 889999999866 9999876531 13579999986 45556666666654
No 155
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=220.78 Aligned_cols=316 Identities=16% Similarity=0.111 Sum_probs=225.3
Q ss_pred CCeEEcCCC-CCCCCCCHHHHHHHhcC-C-CCCC-------CC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~~-------y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
+++++|.+| .-.+..+|++++++.+. . ++.. +. .+...+|++++++++|. +..++.+++++++..++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAAL 122 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHH
Confidence 467888776 34556789999888762 1 2111 11 12357899999999985 45555555567888888
Q ss_pred HHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e 238 (422)
..+.. +||.|+.....|..........|++++.++. .|++.+++.++. +++++|++++++|++|.+.+.+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~ 197 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA 197 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence 87655 7787777777777777777778888877762 367777776642 3678999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCC--c-hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLE--S-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-- 311 (422)
++.++++. ++++|+||+|....+++ . .....+. .+.+++++||||.+|++| ||+++++++++.+.....+
T Consensus 198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~ 274 (406)
T PRK13393 198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI 274 (406)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence 99999987 99999999997333221 1 1111111 224678899999999888 9999999999988876554
Q ss_pred --CCCcHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CCc
Q 014594 312 --YNVSVAAEVAACAALQNPI-YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGV 387 (422)
Q Consensus 312 --~~~~~~~~~aa~~~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~gI 387 (422)
.+.++..+.++.++|+..+ ....++++.++++++.+.|+++++ .+.++.++++.+.+++..++.++.+.|.+ +||
T Consensus 275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi 353 (406)
T PRK13393 275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGI-PHLPNPSHIVPVMVGDPVLCKQISDELLDRYGI 353 (406)
T ss_pred ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCE
Confidence 2456677777877776422 212456678889999999988764 44466778877766432346788888886 699
Q ss_pred EEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.++++..+ ...+++||++. +.++++++.++|+++
T Consensus 354 ~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 354 YVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI 393 (406)
T ss_pred EEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99976542 23478999986 677778887777653
No 156
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=6e-26 Score=222.45 Aligned_cols=313 Identities=19% Similarity=0.143 Sum_probs=217.5
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 99 KIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~----------~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
.|+.+... +.++.+++++.+. .....+|.. ...++|+.+++++|+++++|++|+|++++++.++..++
T Consensus 2 yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 2 YLDNNATT-RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred cCCCcCCC-CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 34444333 3467888888752 211222210 14578899999999998999999999999999988764
Q ss_pred ---CCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 168 ---DPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 168 ---~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.+||+|++....|+.+.. .++..|++++.++.++++.+|++++++.++ ++++++++++++||||.++|.+++.
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~ 159 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIG 159 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHH
Confidence 456889999888876543 334479999999977777899999999997 6899999999999999999999999
Q ss_pred HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH-H-HH-----HHhcCCCC
Q 014594 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-E-YL-----WRAKQPYN 313 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~-~-~l-----~~~~~~~~ 313 (422)
++++. |+++++|++|.... ....+...+-++++.|.+|.+|.+| +|+++++++.. . .+ ......++
T Consensus 160 ~l~~~~g~~vivD~~~~~g~----~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt 233 (379)
T TIGR03402 160 EIAKERGALFHTDAVQAVGK----IPIDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGT 233 (379)
T ss_pred HHHHHcCCEEEEECcccccc----cccCcccCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCC
Confidence 99987 99999999997421 1111222344577888899766556 78888765431 0 00 00112345
Q ss_pred CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcccCC-C---ceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPYPS-Y---SNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~p~-~---~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
.+.....++.++++. .++++ ..+++++.++++.+.|++ ++.+.+... . ...+.+.++ +.+.+++...|.++|
T Consensus 234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g 312 (379)
T TIGR03402 234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-YIEGEAILLLLDMEG 312 (379)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec-CCCHHHHHHhhccCC
Confidence 666666656555543 24556 778899999999999985 665544321 1 123333333 457889999998999
Q ss_pred cEEEeCCCC--C-----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNK--E-----------------LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~--~-----------------~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++.+..+ + ..+.+|+|+. +.+|+|++.++|+.
T Consensus 313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 999976541 0 1478999986 45566666666654
No 157
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=6.4e-26 Score=222.88 Aligned_cols=314 Identities=17% Similarity=0.239 Sum_probs=215.4
Q ss_pred CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++.++|+..+. +.+ ..+|++.+++.+ +.. +..|..+...++.+++++..+ .+++++++|+++|++.++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al 105 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI 105 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence 4577899998752 222 357888888876 221 122334445678888888764 468999999999999998
Q ss_pred HHh----cCCCC----EEEEcCCCchhHHHHHHHcCCEEEEe----cCCCCCC----CCHHHHHHHhhcCCCeEEEEeCC
Q 014594 164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+.. ..+|| +|++.++.|+.+...+...+...... +..+++. .|++.+++.++ +++++|+++.+
T Consensus 106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~ 184 (389)
T PRK01278 106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI 184 (389)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence 865 45665 89999999998776665544432221 1112222 58999999997 58999999988
Q ss_pred CCccC-cCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 228 ~NPtG-~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
+||+| .+++.+.+++|.+. |+++|+||+|.+|...+.... .....+. +.||||.++ +|+|+||++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~ 260 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE 260 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence 99999 77788888777654 999999999998764433211 1111122 357899998 8999999999999
Q ss_pred HHHHHHHhcC--CCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCC-CCcccCCCceEEEEEeC
Q 014594 301 IIEYLWRAKQ--PYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVP-FLNPYPSYSNFILCEVT 370 (422)
Q Consensus 301 ~~~~l~~~~~--~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p~~~~f~~~~~~ 370 (422)
+++.+..... .++.+++.+.++.++|+. +++. ++++++.+++.+.|+ ..+ .+......|.+++++++
T Consensus 261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~ 337 (389)
T PRK01278 261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFL---DNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV 337 (389)
T ss_pred HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe
Confidence 8887754433 367889999999887753 2232 333333333333333 233 22223456788888884
Q ss_pred CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.++++.|+++||.+.++. .+++||+++...+.+++.+++++|
T Consensus 338 --~~~~~~~~~l~~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l 382 (389)
T PRK01278 338 --VPNRDLVQALRDEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERL 382 (389)
T ss_pred --cCHHHHHHHHHHCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence 367899999999999999874 589999975322235566666654
No 158
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.4e-25 Score=221.40 Aligned_cols=317 Identities=17% Similarity=0.201 Sum_probs=218.4
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----CcchHH----HHHHHHHHcCCCCCCEEEeCCHH-HHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPESRR----LRAALAKDSGLESDHILVGCGAD-ELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~-----~~~~~~----lr~~la~~~~~~~~~i~~~~G~~-~al~~~~ 163 (422)
..++.++.+.+++++|+.+.++..+......| + ..|..+ +++.+++++|++.++++++++++ ++...+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~ 99 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGL 99 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHH
Confidence 34589999999998888877766655111234 2 234444 55555556788766787777555 4545555
Q ss_pred HHhcCC--CCEEEEcCCCchhHHHHHHHcC----CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 164 RCVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 164 ~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
.+++.+ ||+|+++.|.|+.+...+...| ++++.++.++++.+|++++++.+. +++++|++++|+ |+|.+.+.
T Consensus 100 ~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~ 177 (398)
T cd00613 100 AAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDL 177 (398)
T ss_pred HHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecch
Confidence 556666 9999999999998887777776 899999976667899999999997 689999999985 89999886
Q ss_pred -HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHHh---
Q 014594 238 -EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA--- 308 (422)
Q Consensus 238 -e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~~--- 308 (422)
+++.++|+. |+++|+|++|....... . ....+.++++.|++|.+ ++ |+|+||+++++++++.+...
T Consensus 178 l~~i~~la~~~g~~livD~~~~~~~~~~-~---~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~ 252 (398)
T cd00613 178 IKEIADIAHSAGALVYVDGDNLNLTGLK-P---PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVG 252 (398)
T ss_pred HHHHHHHHHhcCCEEEEEeccccccCCC-C---hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeec
Confidence 999999987 99999999876432111 1 11234569999999987 45 78999999998887764110
Q ss_pred --------------------------cC--CCCCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcc
Q 014594 309 --------------------------KQ--PYNVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNP 357 (422)
Q Consensus 309 --------------------------~~--~~~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~ 357 (422)
.. .++.+.....++...+. ..+..+ ++++++++++++.+.|++++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~- 331 (398)
T cd00613 253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL- 331 (398)
T ss_pred cccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence 00 12222233322322222 233455 88899999999999999987544
Q ss_pred cCCCceE--EEEEeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 358 YPSYSNF--ILCEVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 358 ~p~~~~f--~~~~~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+.+..+ ++++++. +.++.++++.|.++||.+.... ....+.+|+++....+.+++++.++.
T Consensus 332 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 332 PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 2333333 5777764 3467889999999999875422 22357999998643333555555543
No 159
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.5e-25 Score=219.78 Aligned_cols=270 Identities=18% Similarity=0.214 Sum_probs=201.3
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~ 199 (422)
.+||+++..+|++++++++|. +++++++|+++++..++.+++++||+|+++.|.|..+. ..++..|++++.++.
T Consensus 59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 456788999999999999995 36788899999999999989999999999999886443 344668999999874
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i 276 (422)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .. ..+.++
T Consensus 137 -----~d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-~l----~~g~Di 205 (400)
T PRK06234 137 -----SNLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-PL----QLGADV 205 (400)
T ss_pred -----CCHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-ch----hhCCcE
Confidence 27999999997 689999999999999999999999999986 89999999998654321 11 224569
Q ss_pred EEccChhhhccccccc-eeeecCHHHHHHHHHhc----CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc
Q 014594 277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK 350 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~----~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~ 350 (422)
++.|+||.++.+|+|+ ||+++++++++.+.... ....+++.....+...|+. +. +.++..++..++.+.|+
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t---l~~r~~~~~~na~~~a~~L~ 282 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT---LQIRMEKHCKNAMKVAKFLE 282 (400)
T ss_pred EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888775 99999999888876421 1245666666666555543 33 66667788888999998
Q ss_pred cCCCCc--ccCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014594 351 DVPFLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN----------------- 394 (422)
Q Consensus 351 ~~~~~~--~~p~----------------~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~----------------- 394 (422)
+.+.+. .+|. .|..+.+++.++ ....+|.+.|.-.++.+.-|+.
T Consensus 283 ~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 362 (400)
T PRK06234 283 SHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTA 362 (400)
T ss_pred cCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCH
Confidence 765432 1221 244667788532 2345666777644544433321
Q ss_pred ------CCCCCeEEEEecChh
Q 014594 395 ------KELKGYVRVSVGKPE 409 (422)
Q Consensus 395 ------~~~~~~iRis~~~~~ 409 (422)
.-.++.||||++.+.
T Consensus 363 ~~~~~~gi~~~l~R~svGlE~ 383 (400)
T PRK06234 363 EERKEAGISDGLVRLSVGLED 383 (400)
T ss_pred HHHHhcCCCCCeEEEEeCCCC
Confidence 011468999999754
No 160
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=2e-25 Score=223.25 Aligned_cols=314 Identities=18% Similarity=0.206 Sum_probs=224.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----Ccc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~-----~~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
..+.++.|..++..+..+.+++........| | ..+ ..++++++++++|++.+++++++|++++++.++.+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a 148 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA 148 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence 5678888888888777776665442211224 3 222 23455777888999888999999999999999888
Q ss_pred hc-CCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
+. .+||+|+++.+.|+.+...++. .|++++.++.+++ .+|++++++.++ +++++|++++| ||||.+.+.+++
T Consensus 149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I 225 (447)
T PRK00451 149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI 225 (447)
T ss_pred HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence 74 7899999999999887766543 7999999998777 899999999997 68999999999 899999999999
Q ss_pred HHHHcC-CCeEEE--ccCCccccCCCchhhhhhcCCcEEEEc---cChhhhccccccceeeecCHHHHHHHH--------
Q 014594 241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYLW-------- 306 (422)
Q Consensus 241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~~~~G~r~G~i~~~~~~~~~l~-------- 306 (422)
.++++. |+++++ |.+...+.. .....+.++++. +|||.++++|+|+||+++++++++.+.
T Consensus 226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~ 299 (447)
T PRK00451 226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETV 299 (447)
T ss_pred HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeec
Confidence 999997 888887 433221110 112344456655 677888888999999999999888741
Q ss_pred --------------------HhcCCCCC--cHHHH-HHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC
Q 014594 307 --------------------RAKQPYNV--SVAAE-VAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS 360 (422)
Q Consensus 307 --------------------~~~~~~~~--~~~~~-~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~ 360 (422)
+.....+. +...+ .++..++. ..++++ +++++.++++++.+.|++++++.+. +
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~ 378 (447)
T PRK00451 300 DADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D 378 (447)
T ss_pred ccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C
Confidence 11111222 11222 22322222 234556 8899999999999999998766654 4
Q ss_pred CceEEE--EEeCCCCCHHHHHHHHHhCCcEEE-eCCC--CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594 361 YSNFIL--CEVTSGMDAKKLKDDLAKMGVMIR-HYNN--KELKGYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~--~~~~~~~~~~~~~~~L~~~gI~v~-~~~~--~~~~~~iRis~---~~~~~~~~l~~al~~l 421 (422)
+++|.+ ++++ .+..++.+.|.++||.+. ++.. +...+++|+++ .+.++++++.++|+.+
T Consensus 379 ~~~~~~~~v~~~--~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 379 GPFFNEFVVRLP--KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred CCeEEEEEEecC--CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 445544 5553 467899999998887742 2222 23457999996 5677888888888764
No 161
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=1.5e-25 Score=218.08 Aligned_cols=216 Identities=14% Similarity=0.172 Sum_probs=166.9
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC----chhHHHHHHHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----FTMYEFDAAVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~----y~~~~~~~~~~g~~~~~v~~~~ 201 (422)
+.++...+|++++++++|.+. .+++ +++++++..++.+++++||+|+++.|. |..+...++..|+++..++.+
T Consensus 42 ~~~p~~~~L~~~lA~l~g~~~-~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~- 118 (376)
T PRK06460 42 EANPTVLELTKKIVELENAEM-GVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG- 118 (376)
T ss_pred CCCccHHHHHHHHHHHhCCCc-EEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC-
Confidence 356778999999999999753 4555 555689999999999999999998754 456666778899999888743
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
+.+.+++.++ +++|+|++++|+||||.+++.+++.++++. |+++|+||+|..+... .. . ..+.++++.|
T Consensus 119 ----~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~---l-~~~~divv~S 188 (376)
T PRK06460 119 ----SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KP---L-ELGADIVVHS 188 (376)
T ss_pred ----CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-Ch---h-hcCCCEEEee
Confidence 2234444444 689999999999999999999999999987 9999999999854211 11 1 2345699999
Q ss_pred Chhhhcc-ccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 281 FSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 281 ~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
+||.++. .+.++||+++++++++.+.+.+.+++.+... ..+..+++..+|++ +.+++.++++++.+.|++++.+
T Consensus 189 ~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~-~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 189 ASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDP-HAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred cceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9998752 2367999999999999998777666544222 34455566668888 8899999999999999987644
No 162
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=2.4e-25 Score=220.81 Aligned_cols=317 Identities=16% Similarity=0.145 Sum_probs=219.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC------Cc-chHHH----HHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP------DP-ESRRL----RAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~------~~-~~~~l----r~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
.+.++|..++|+ .+|.+++++... . ++.+++ .. ....+ |+.+++++|.+..+|++++| ++++.
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~ 101 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA 101 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence 456999999998 578999998652 1 111111 11 12233 44788999988777777665 67899
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHH-----HHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
.++.+++++||+|+++.|+|..+.. .....|++++.++.+ +++.+|++++++.+++.++++|++++++| |..
T Consensus 102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~ 179 (416)
T PRK00011 102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP 179 (416)
T ss_pred HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence 9999999999999999999975421 112346788888865 45789999999999755899999876654 567
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP 311 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~ 311 (422)
.+.+++.++++. |+++|+|++|... ...+.....+. ..++++.|+||.+ +|.|.||++++ +++++++.....+
T Consensus 180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~ 255 (416)
T PRK00011 180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP 255 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence 899999999987 9999999998632 22111111111 3358899999965 78899999995 6888888776654
Q ss_pred CCC---cHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014594 312 YNV---SVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL 382 (422)
Q Consensus 312 ~~~---~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~-~~~~~~~~~~L 382 (422)
+.. ....+.++..++.. .++++ .+++++++++++.+.|+++++ .+.+ ..++++|+.+++ +.+.+++.+.|
T Consensus 256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L 334 (416)
T PRK00011 256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVVSGGTDNHLVLVDLRSKGLTGKEAEAAL 334 (416)
T ss_pred cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eeeecCCCCeEEEEeCcccCCCHHHHHHHH
Confidence 322 22222222222211 23455 888999999999999998863 4333 345889999853 34778899999
Q ss_pred HhCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014594 383 AKMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~l 421 (422)
.++||.++.+.. +..+.++|++.. +.++++++.++++++
T Consensus 335 ~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~ 386 (416)
T PRK00011 335 EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV 386 (416)
T ss_pred HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence 999999984321 223567999642 256778888887753
No 163
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=6.6e-25 Score=214.51 Aligned_cols=305 Identities=19% Similarity=0.180 Sum_probs=222.4
Q ss_pred CCCHHHHHHHhc-CC----CCCCCCCcc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCEEEEc
Q 014594 108 GPPPEVREALGQ-LK----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVDC 176 (422)
Q Consensus 108 ~~~~~v~~al~~-~~----~~~~y~~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~----~gd~Vl~~ 176 (422)
++.|.+.+++.+ .. ....|+... ..++++++++++|.+++++++++|+++++..+++++.+ ++|+|++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~ 110 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP 110 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence 356777777754 21 112233322 36799999999998877899999999999999877654 57899999
Q ss_pred CCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 177 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
.+.|..+...++..|++++.++.++++.+|++++++.++ +++++|++++++|+||.+.|.+++.++++. |+++++|++
T Consensus 111 ~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a 189 (371)
T PRK13520 111 ESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAA 189 (371)
T ss_pred CcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEec
Confidence 999999988888899999999987777899999999997 578888888899999999999999999987 999999999
Q ss_pred CccccCC--Cchh-hhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCC-----------CCcHHHHH
Q 014594 256 YTEFSGL--ESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-----------NVSVAAEV 320 (422)
Q Consensus 256 y~~~~~~--~~~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~-----------~~~~~~~~ 320 (422)
|..+... .... ......+...+..|.+| |+++|.++|+++. ++++++.+... .++ +.+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~ 267 (371)
T PRK13520 190 FGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVD-TPYLTSKKQATLTGTRSGAGVA 267 (371)
T ss_pred chhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhccc-CccccCCCCcceEeeccChHHH
Confidence 9865421 1100 00111222344557778 7777889998775 66677766421 111 12333445
Q ss_pred HHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC
Q 014594 321 AACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL 397 (422)
Q Consensus 321 aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~ 397 (422)
++.++|+. .+..+ .+++..++++++.+.|+++++..+.+...+++.++++ +.+++.+.|.++||.++.+. .
T Consensus 268 ~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~ 341 (371)
T PRK13520 268 ATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDDP---NPDEVREKLRERGWRVSVTR---C 341 (371)
T ss_pred HHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEecC---CHHHHHHHHHHCCceeccCC---C
Confidence 55555543 22334 7888999999999999988542144556778888875 57899999999999998764 2
Q ss_pred CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 398 KGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 398 ~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+++|||+. +.++++++.++++.+
T Consensus 342 ~~~iRis~~~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 342 PEALRIVCMPHVTREHIENFLEDLKEV 368 (371)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 468999985 667777777777653
No 164
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.95 E-value=2.9e-25 Score=218.49 Aligned_cols=312 Identities=15% Similarity=0.172 Sum_probs=218.4
Q ss_pred CCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCC---CC-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~---~~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++++|+..+... + ..+|++.+++.+ +.. .. .+..+...+|.++++++.+. +.+++++++++|++.++
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Al 114 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAI 114 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHH
Confidence 457889999777432 3 257888888865 321 11 12334456788999988763 68999999999999999
Q ss_pred HHhcC---------CC-CEEEEcCCCchhHHHHH-HHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594 164 RCVLD---------PG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPK 220 (422)
Q Consensus 164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (422)
+.... +| ++|+....+|++....+ ...+.. +..++ ..|++.+++.+. ++++
T Consensus 115 k~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~-~~~~ 188 (396)
T PRK04073 115 KAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP-----YGDLEALKAAIT-PNTA 188 (396)
T ss_pred HHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC-----CCCHHHHHHhcc-cCeE
Confidence 96531 34 67888888786543322 222211 11222 127899999986 6899
Q ss_pred EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccce
Q 014594 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG 293 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G 293 (422)
+|++++++||+|.+++ .+++.++|+. |+++|+||+|.+|...+.... ..+..++ +.+|||.+|.+|+|+|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd---i~~~sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD---MYILGKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC---EEEecccccCCCCcce
Confidence 9999999999999998 4567777765 999999999998765443221 1111222 3357999998889999
Q ss_pred eeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--CcccCCCceEEEEEe
Q 014594 294 YGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEV 369 (422)
Q Consensus 294 ~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~~~~ 369 (422)
|+++++++++.+... ...|+.+++++.++.++|+..+-....++.+++++++.+.|++++. +...++.|+|+++++
T Consensus 266 ~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~ 345 (396)
T PRK04073 266 CVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVEL 345 (396)
T ss_pred EEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEe
Confidence 999999999887643 2347789999999999986311111556667778888888887632 333456788999998
Q ss_pred CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhh
Q 014594 370 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMH 420 (422)
Q Consensus 370 ~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~ 420 (422)
+ .++.++.+.|.++||.+.+.. +++|||++ .+.++++++.++|++
T Consensus 346 ~--~~~~~~~~~l~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 346 N--EPARPYCEALKEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred c--chHHHHHHHHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHH
Confidence 5 357889999999999998643 47999995 355556666666554
No 165
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=4.7e-25 Score=214.74 Aligned_cols=236 Identities=16% Similarity=0.147 Sum_probs=179.2
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 014594 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~ 177 (422)
|+++++.++.+..+. ....+ .+|+++...+|+++++++.+ .+++++++|+++++..++.+++++||+|+++.
T Consensus 26 i~~ss~~~~~~~~~~-----~~~~Y-~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~ 97 (382)
T TIGR02080 26 IYLSTTYNFTGFNEP-----RAYDY-SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH 97 (382)
T ss_pred eeCCceeEeCCcCcc-----CCCcc-cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence 777777765543211 11223 67788889999999999998 46899999999999999999999999999999
Q ss_pred CCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEE
Q 014594 178 PTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (422)
Q Consensus 178 p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~ 252 (422)
|+|...... ....|.++..++ ..|++.++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+
T Consensus 98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 999853332 222355665554 247999999997 689999999999999999999999999987 999999
Q ss_pred ccCCccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccC
Q 014594 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (422)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~ 328 (422)
|++|..+.... ... .+..++++|+||.++ .+|++.|++++ ++++++++...+.. ..++++.+..+...+
T Consensus 172 D~a~~~~~~~~-pl~----~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-- 244 (382)
T TIGR02080 172 DNTFLSPALQN-PLA----LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL-- 244 (382)
T ss_pred ECCCcccccCC-chh----hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc--
Confidence 99998654322 111 123488999999875 46789999877 67888888765544 456666665554433
Q ss_pred ChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 329 PIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
+.+. +.++..++...+.+.|++.+.+
T Consensus 245 -~tl~~R~~~~~~na~~~a~~L~~~p~v 271 (382)
T TIGR02080 245 -RTLVARMRLQQRNAQAIVEYLQTQPLV 271 (382)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 3455 7778889999999999987654
No 166
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=1.1e-24 Score=214.90 Aligned_cols=312 Identities=15% Similarity=0.117 Sum_probs=217.5
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 98 VKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
+.|+.+... +.++.+++++.+. ......|. ....++|+.+++++|+++++|++++|++++++.++..
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 678776654 4578888887652 11011111 1245789999999999989999999999999998876
Q ss_pred hc----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
+. ++||+|+++.+.|..+...+ +..|++++.++.++++.+|++.+++.++ ++++++++++++||||.+.+.+
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~ 162 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA 162 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence 53 68999999999998654433 4469999999987777899999999997 6799999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------- 308 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--------- 308 (422)
+|.++++. |+++++|++++.... + ..+...+.++++.|.+|.+|.+| +|+++++++....+...
T Consensus 163 ~I~~l~~~~g~~livD~a~a~g~~-~---~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~ 236 (402)
T TIGR02006 163 AIGEICRERKVFFHVDAAQSVGKI-P---INVNELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERG 236 (402)
T ss_pred HHHHHHHHcCCEEEEEcchhcCCc-c---cCccccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCC
Confidence 99999987 999999999974321 1 11223345588888999777446 88888876543322211
Q ss_pred cCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---Cc-eEEEEEeCCCCCHHHHHHHH
Q 014594 309 KQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YS-NFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~-~f~~~~~~~~~~~~~~~~~L 382 (422)
...++.+.....++.++|+. .++.+ ..+++++.++++.+.|++++.+.+... .. ..+.+.++ +.+.+++...|
T Consensus 237 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~-~~~~~~~~~~l 315 (402)
T TIGR02006 237 MRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN-YVEGESLIMAL 315 (402)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe-CcCHHHHHHhc
Confidence 11245565555555555543 13455 778899999999999988775543211 11 11123443 34566666555
Q ss_pred HhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 383 AKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 383 ~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++|.++.|... ...+++|+|++ +.+|+|++.++|+.
T Consensus 316 --~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 316 --KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred --CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 58887755431 01479999986 45677777777764
No 167
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=1.9e-24 Score=209.61 Aligned_cols=296 Identities=16% Similarity=0.141 Sum_probs=210.6
Q ss_pred CCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---------------E
Q 014594 109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K 172 (422)
Q Consensus 109 ~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd---------------~ 172 (422)
+++++.+++.+... ..++.. -..++++.+++++|. +++++++|+++++.+++.+++++|| +
T Consensus 25 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e 101 (363)
T TIGR01437 25 VSDEVADAQKRGAQ-NYFEIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE 101 (363)
T ss_pred CCHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence 67999999987422 112222 356788888899986 4799999999999999999999998 9
Q ss_pred EEEcCCCchhH----HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCccCcCCCHHHHHHHHcC-
Q 014594 173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM- 246 (422)
Q Consensus 173 Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~e~l~~i~~~- 246 (422)
|+++.|.|..| .......|++++.++. ++.+|+++++++++ +++++++ +++|+||+|.+.+.+++.++|+.
T Consensus 102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~ 178 (363)
T TIGR01437 102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH 178 (363)
T ss_pred EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence 99999877655 4566778999999985 35799999999997 7889766 56889999999999999999997
Q ss_pred CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-------CCCcHHHH
Q 014594 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------YNVSVAAE 319 (422)
Q Consensus 247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-------~~~~~~~~ 319 (422)
|+++|+|++|.. ... .....+.++++.|++|.+ .|++.|++++++++++.+...... +..+..++
T Consensus 179 gi~vivD~a~~~---~~~---~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl 250 (363)
T TIGR01437 179 NLPLIVDAAAEE---DLQ---KYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGL 250 (363)
T ss_pred CCeEEEECCCCC---chH---HHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHH
Confidence 999999999972 111 111223458889999965 678899999998888876433221 12223344
Q ss_pred HHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCce-----EEEEEeC-CCCCHHHHHHHHHhCC--cE
Q 014594 320 VAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSN-----FILCEVT-SGMDAKKLKDDLAKMG--VM 388 (422)
Q Consensus 320 ~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~-----f~~~~~~-~~~~~~~~~~~L~~~g--I~ 388 (422)
.++...+.+.. .+..+.+.++++.+.+.|++++++.+. +..+. -+.++.. .+.+..++.+.|.++| |.
T Consensus 251 ~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~ 329 (363)
T TIGR01437 251 TAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIY 329 (363)
T ss_pred HHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEE
Confidence 44444443211 123334445677899999998766543 11111 1223321 2678999999998777 66
Q ss_pred EEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594 389 IRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 421 (422)
+++. +...+.+|+++. +++|.+.+.++|+++
T Consensus 330 ~r~~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 330 TRGY--KANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred Eeee--eecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 6653 344678888865 467788888888765
No 168
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=8e-25 Score=214.04 Aligned_cols=276 Identities=16% Similarity=0.159 Sum_probs=199.8
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 199 (422)
.+|+++...+|++.+++++|.+ + .+++++++.++..++.+++++||+|+++.|.|...... ....|+++..++.
T Consensus 56 ~r~~~pt~~~Le~~lA~l~G~~-~-al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 56 SRLGNPTVKLFEERMAVLEGGE-E-ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred cCCCCcchHHHHHHHHHHhCCC-c-EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 4578888899999999999953 4 45455556799999988999999999999988754333 3335666655542
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|........ . ..+..+++
T Consensus 134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~p-l----~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRP-L----ELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCcEEE
Confidence 47899999997 689999999999999999999999999987 999999999974332211 1 22345888
Q ss_pred ccChhhhccccccc-eeeecCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~-~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|+||.++.+|.|+ ||++++++.++++.+. ... ..++++.+.++...|+ .+. +.++.+++.+++.+.|++++
T Consensus 203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---tl~~r~~~~~~~a~~la~~L~~~p 279 (386)
T PRK06767 203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---TLAVRMDRHCDNAEKIVSFLKNHD 279 (386)
T ss_pred ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998888885 8999999888775432 221 2346665555444443 334 77788999999999999987
Q ss_pred CCc-c-cC----------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C-----------------CC
Q 014594 354 FLN-P-YP----------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K-----------------EL 397 (422)
Q Consensus 354 ~~~-~-~p----------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------~-----------------~~ 397 (422)
.+. + +| ..+..+.+++.++ .+..+|.+.|...++.+.-|+. + -.
T Consensus 280 ~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~ 359 (386)
T PRK06767 280 AVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIY 359 (386)
T ss_pred CccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCC
Confidence 665 2 33 2355677888532 3567888888777777764432 0 01
Q ss_pred CCeEEEEecChhhHHHHHH
Q 014594 398 KGYVRVSVGKPEHTDALME 416 (422)
Q Consensus 398 ~~~iRis~~~~~~~~~l~~ 416 (422)
++.||||++-+. .|+|.+
T Consensus 360 ~~l~R~svGlE~-~~dl~~ 377 (386)
T PRK06767 360 DNLIRLSVGLES-WEDIVS 377 (386)
T ss_pred CCeEEEEeccCC-HHHHHH
Confidence 468999999754 344433
No 169
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=1.2e-24 Score=211.32 Aligned_cols=229 Identities=17% Similarity=0.185 Sum_probs=177.3
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|+++++++.|.+. .++++|+++++..++. ++++||+|+++.|.|+. +...++..|++++.++.
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~~-ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVMS-LFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHH-HhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 56788889999999999999754 4777888899998764 78999999999999974 34445568999999874
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|++.++++++ +++++|++++|+||+|...+.+++.++++. |+++|+|++|....... .. ..+.++++
T Consensus 124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence 48999999997 689999999999999999999999999987 99999999995322111 11 23567999
Q ss_pred ccChhhhcc-ccccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~-~G~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|+||.++. ++++.|+++++ +++.+.+...+.. ..++++.+..+...|+ .+. +.++.+++++.+.+.|++++
T Consensus 193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---tl~~r~~~~~~~a~~l~~~L~~~p 269 (366)
T PRK08247 193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---TLALRMRQHEENAKAIAAFLNEQP 269 (366)
T ss_pred eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998863 34689999986 6777777655433 4567777777777664 334 66677999999999999987
Q ss_pred CCcc--cCC-CceEEEEEeC
Q 014594 354 FLNP--YPS-YSNFILCEVT 370 (422)
Q Consensus 354 ~~~~--~p~-~~~f~~~~~~ 370 (422)
.+.. +|. +++|.| ++.
T Consensus 270 ~v~~v~~P~~gg~~sf-~~~ 288 (366)
T PRK08247 270 GVTDVLYPGRGGMLSF-RLQ 288 (366)
T ss_pred CeeEEecCCcCcEEEE-EEC
Confidence 6542 563 455544 774
No 170
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3.2e-24 Score=209.08 Aligned_cols=216 Identities=17% Similarity=0.178 Sum_probs=173.6
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-HHHHH---HHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~g~~~~~v~~ 199 (422)
.+||++....|+++++++.|. +++++++|+++++..++.+++++||+|+++.|+|+. +.... ...|.++..++
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 567899899999999999994 479999999999999999999999999999999985 43222 22445666654
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
..|++.++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+|++|...... ... ..+..+++
T Consensus 124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl----~~gaDivv 193 (386)
T PRK08045 124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPL----ALGADLVL 193 (386)
T ss_pred ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cch----hhCCCEEE
Confidence 368999999997 689999999999999999999999999987 9999999999865432 122 12234899
Q ss_pred ccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++ .++.+.|++++ ++++++.+...... ..++++.+..+...|+. +. +.++..+++..+.+.|++.+
T Consensus 194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---l~~R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999875 45577899877 57788877655443 45788888888888864 66 88899999999999999876
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 271 ~v 272 (386)
T PRK08045 271 LV 272 (386)
T ss_pred CE
Confidence 54
No 171
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=3.4e-24 Score=209.56 Aligned_cols=319 Identities=16% Similarity=0.162 Sum_probs=222.7
Q ss_pred CCCCCeEEcCCC--CCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhc
Q 014594 92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~ 167 (422)
.+++.++|+.++ ...++..|++.+++.+ +.....++.....++++++++.+...++ .+++++++++++..+++...
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar 105 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR 105 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence 456778999876 3456778999998876 3322334444456788889987643444 46899999999998888542
Q ss_pred --CCCCEEEEcCCCchhHHH-HHHHcCCEEEE------ec-CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC-
Q 014594 168 --DPGDKIVDCPPTFTMYEF-DAAVNGAAVVK------VP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN- 236 (422)
Q Consensus 168 --~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~------v~-~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~- 236 (422)
..+++|++....|+.... .....|.+... ++ .......|++.+++.+. +++.+|++++++|++|...+
T Consensus 106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~~~ 184 (375)
T PRK04260 106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN-KNTAAVMLELVQGESGVLPAD 184 (375)
T ss_pred HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC-CCeEEEEECCeECCCCCcCCC
Confidence 345789998888875332 22222221110 00 00001248999999886 67889999999999999876
Q ss_pred ---HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--
Q 014594 237 ---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-- 308 (422)
Q Consensus 237 ---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-- 308 (422)
.+++.++++. |+++|+||+|.+|...+.... .....++ +.||||.++ +|+|+||+++++++.+.+...
T Consensus 185 ~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~ 260 (375)
T PRK04260 185 KDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYGSH 260 (375)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCCCC
Confidence 4777777776 999999999988764433222 2222233 338999998 899999999999998877542
Q ss_pred cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594 309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 384 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~ 384 (422)
...++.+++.+.++.++|+. +++.+ .++..+..++.+.+.+.+.+.+...+..|+++|++++ .+..++.+.|.+
T Consensus 261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~l~~ 338 (375)
T PRK04260 261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--ADLSQLVEAARD 338 (375)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec--CcHHHHHHHHHh
Confidence 23467789999999999854 35555 6677777777787777776544444568999999984 467889999999
Q ss_pred CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.+.+.. .+.+|+++....+.+++.++++++
T Consensus 339 ~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l 371 (375)
T PRK04260 339 KGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAIL 371 (375)
T ss_pred CCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHH
Confidence 999998753 478999985333345566666554
No 172
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=1.3e-24 Score=210.21 Aligned_cols=278 Identities=17% Similarity=0.100 Sum_probs=203.9
Q ss_pred CCC-CcchHHHHHHHH----HHcCCC--CCCEEEeCCHHHHHHHHHHHhcC------------CC--CEEEEcCCCchhH
Q 014594 125 IYP-DPESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLD------------PG--DKIVDCPPTFTMY 183 (422)
Q Consensus 125 ~y~-~~~~~~lr~~la----~~~~~~--~~~i~~~~G~~~al~~~~~~l~~------------~g--d~Vl~~~p~y~~~ 183 (422)
.|+ .++..+++++++ +++|.+ ++++++|+|+++++..++.+++. ++ +.|+++.++|..+
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~ 108 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV 108 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH
Confidence 363 345666666655 455874 45899999999999999987742 23 4788899999998
Q ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (422)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~ 257 (422)
...++..|++++.++.++++.+|++++++.+.+. +++++++++|+||||.+.+.+++.++++. |+++++|++|.
T Consensus 109 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~ 188 (345)
T cd06450 109 EKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYG 188 (345)
T ss_pred HHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhh
Confidence 8888888999999997766789999999999731 68889999999999999999999999987 99999999998
Q ss_pred cccCCCchhhh-hhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHHHH
Q 014594 258 EFSGLESRMEW-VKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVK 335 (422)
Q Consensus 258 ~~~~~~~~~~~-~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~~~ 335 (422)
.+......... ... .+.+.+..|++|.++ ++.++|+++.+ .+.+.++...+....+.+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-----------------~~~~~~~l~~l~~~g~~~~~ 250 (345)
T cd06450 189 GFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR-----------------ALKLWATLRRFGRDGYGEHI 250 (345)
T ss_pred HHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-----------------HHHHHHHHHHHhHHHHHHHH
Confidence 76532111110 111 123456779999554 66789988766 44555566666554444488
Q ss_pred HHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---
Q 014594 336 EALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--- 407 (422)
Q Consensus 336 ~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--- 407 (422)
++..+.++++.+.|++++.+.+ .+..++++.+.+++ +.+..++.+.|.++|+.+.++.....++++|++++.
T Consensus 251 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~ 330 (345)
T cd06450 251 DRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLT 330 (345)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCC
Confidence 8888999999999999875553 34567788888764 246678999999887666554333356799999864
Q ss_pred -hhhHHHHHHHHhh
Q 014594 408 -PEHTDALMECLMH 420 (422)
Q Consensus 408 -~~~~~~l~~al~~ 420 (422)
.++++++.++|++
T Consensus 331 t~~di~~l~~~l~~ 344 (345)
T cd06450 331 TRDDADALLEDIER 344 (345)
T ss_pred CHHHHHHHHHHHHh
Confidence 3556666666654
No 173
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=1.1e-23 Score=201.32 Aligned_cols=317 Identities=21% Similarity=0.202 Sum_probs=240.7
Q ss_pred CCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCC-----CC--CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANE-NPYGPPPEVREALGQ-L-KFP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~-----~~--y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.++++|.+|+ -.+..+|+++++..+ + .++ .+ +++. -..+|++.||+|+|. ++.+++++|-. ++..+
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-e~al~f~SGy~-AN~~~ 115 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-EAALLFSSGFV-ANLGL 115 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEcccch-hHHHH
Confidence 46789998875 345677888777655 2 111 11 2222 367899999999995 35666666666 55566
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCH
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~ 237 (422)
+.++++++|.|+...-.|......++..+++++.++ +.|++.||+.+++. +.++|++.......|.+.|+
T Consensus 116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-----HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec-----CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 677999999999999999999999999999999987 46889999999642 25677777999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
++|.+|++. +.++++||+|+-...++. ...... ..+.+|+++||||++|..| ||+.++..+++.+.....+
T Consensus 191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~ 267 (388)
T COG0156 191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP 267 (388)
T ss_pred HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence 999999998 999999999997665432 222222 2455899999999999888 9999999999999988776
Q ss_pred C----CCcHHHHHHHHHHccCChH-HHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 312 Y----NVSVAAEVAACAALQNPIY-LEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 312 ~----~~~~~~~~aa~~~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
| ++++...+++.++|+.-.. .+.+++++++..++.+.++..++ ...+..+..+.+.+.+...+.++.+.|+++|
T Consensus 268 ~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~G 346 (388)
T COG0156 268 FIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL-VLLPSESPIIPVILGDEERALEASRALLEEG 346 (388)
T ss_pred eeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCeeeeEeCCHHHHHHHHHHHHHCC
Confidence 3 4567777777777765332 23888888888888877776664 3357788888888865455778888999889
Q ss_pred cEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
|.+.+... +.+...+|++++ +.++++.+.+++..+
T Consensus 347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 99987766 455679999987 456667777776653
No 174
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=6.5e-24 Score=207.87 Aligned_cols=319 Identities=15% Similarity=0.145 Sum_probs=209.8
Q ss_pred CCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCC--CCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~--~~~~i~~~~G~~~al~~~~~~ 165 (422)
.+++.++|+.+|.. .+ ..+|++.+++.+ +......+.....++++++++++.- ..+.++++++++++++.+++.
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~ 105 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL 105 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence 45778999988862 22 367888888876 3221112222335666666666642 135899999999999999995
Q ss_pred h-cCCC-CEEEEcCCCchhHHHHHH-HcCCEEE---EecCCCC----CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 166 V-LDPG-DKIVDCPPTFTMYEFDAA-VNGAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 166 l-~~~g-d~Vl~~~p~y~~~~~~~~-~~g~~~~---~v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
. ..+| ++|+..++.|+....... ..+.... ..+...+ ...|++.+++.+. +++++|+++.+++++|...
T Consensus 106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence 3 2244 679999998874432222 2222111 0111011 0127899999986 6799999999999998874
Q ss_pred -CHHHHHH---HHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594 236 -NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (422)
Q Consensus 236 -~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~ 308 (422)
+.+.+.+ +|+. |+++|+||+|.+|...+.... .....++ +.+|||.++ +|+|+||+++++++.+.+...
T Consensus 185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~ 260 (377)
T PRK02936 185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG 260 (377)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence 5455544 5554 999999999998765443221 1221222 236899999 899999999999998887543
Q ss_pred cC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594 309 KQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 309 ~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.. .++.+++.+.++.++|+.....+..++++++.+++++.|++ ++.+......|.++|+++++ +...+.+.|
T Consensus 261 ~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--~~~~~~~~l 338 (377)
T PRK02936 261 SHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE--EVAPVIEQL 338 (377)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc--hHHHHHHHH
Confidence 32 36789999999999986532111445566666666666654 34333234567899999964 367888888
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++||.+.+.. .+++||++....+.+++.+++++|
T Consensus 339 ~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l 373 (377)
T PRK02936 339 REEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLL 373 (377)
T ss_pred HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence 89999998754 479999964322235566666654
No 175
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.93 E-value=4.2e-24 Score=208.51 Aligned_cols=279 Identities=19% Similarity=0.198 Sum_probs=202.4
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|++.+++++|. +++++++++++++..++.+++++||+|+++.+.|.. +...++..|++++.++.
T Consensus 49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 457777789999999999986 478889999999999999999999999999988853 34456668999998875
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
+ |+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|..+..... . ..+.++++
T Consensus 127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l----~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-L----KLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCCCEEE
Confidence 3 7899999886 689999999999999999999999999987 999999999986543221 1 22445888
Q ss_pred ccChhhhccccccc-eeeecCHHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 279 ~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
.|++|.++.+|.++ |++++++++++.+......+ .+++... ..++..-+.+. +.++..++++.+.+.|++++.
T Consensus 196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~ 272 (380)
T TIGR01325 196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNA---WVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQ 272 (380)
T ss_pred eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHH---HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 89999998778775 78888999888877654433 3344443 33444445566 778888999999999998764
Q ss_pred Cc--ccC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC----------------------
Q 014594 355 LN--PYP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------------------- 394 (422)
Q Consensus 355 ~~--~~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~---------------------- 394 (422)
+. .+| ..|..+.+++.+.....+|.+.|.--.+.+.-|+.
T Consensus 273 v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~ 352 (380)
T TIGR01325 273 VQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAA 352 (380)
T ss_pred ccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHh
Confidence 43 122 23456777885212234555555322222221110
Q ss_pred -CCCCCeEEEEecChhhHHHHHHHHh
Q 014594 395 -KELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 395 -~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
.-.++.||||++.++ .|+|.+-++
T Consensus 353 ~gi~~~liR~svGlE~-~~dl~~dl~ 377 (380)
T TIGR01325 353 AGIGDGLVRLSVGLED-VDDLIADLK 377 (380)
T ss_pred cCCCCCeEEEEeccCC-HHHHHHHHH
Confidence 011468999999865 466665554
No 176
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.93 E-value=2.2e-24 Score=211.33 Aligned_cols=270 Identities=18% Similarity=0.194 Sum_probs=189.9
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC--CC-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 97 IVKIDANENPYGPPPEVREALGQL--KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~--~~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
.|.+++... ++.+.++.+..... .+ ..+|+++...+|++++++++|.+.. +++++++.++..++.+++++||+|
T Consensus 31 pi~~~~~~~-~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~V 107 (398)
T PRK07504 31 ALFLTQGFV-YDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHV 107 (398)
T ss_pred CeECCCCcc-CCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEE
Confidence 366766542 23334443333211 11 1457888889999999999997643 446677888888888889999999
Q ss_pred EEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CC
Q 014594 174 VDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI 248 (422)
Q Consensus 174 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~ 248 (422)
+++.|.|..+... +...|++++.++ ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+
T Consensus 108 l~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi 181 (398)
T PRK07504 108 VAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGA 181 (398)
T ss_pred EEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCC
Confidence 9999999865433 345799988885 478999999997 789999999999999999999999999987 99
Q ss_pred eEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHH-HHHhcC--CCCCcHHHHHHHHH
Q 014594 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACA 324 (422)
Q Consensus 249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~-l~~~~~--~~~~~~~~~~aa~~ 324 (422)
++|+|++|..+... ... ..+.++++.|+||.++.+|+++| +++++++.+.+ +..... ...++++.+..+..
T Consensus 182 ~lvvD~a~a~~~~~-~~~----~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~ 256 (398)
T PRK07504 182 KLVVDNVFATPLFQ-KPL----ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLK 256 (398)
T ss_pred EEEEECCccccccC-Cch----hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 99999999865432 111 22456899999999988999985 66677776643 332222 23456665555555
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccC----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--PYP----------------SYSNFILCEVTSG-MDAKKLKDDLA 383 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~ 383 (422)
.|+ .+. +.++..++...+.+.|++++.+. .+| ..|..+.+++.++ .....|.+.|.
T Consensus 257 ~L~---tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~ 332 (398)
T PRK07504 257 GLE---TLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALK 332 (398)
T ss_pred ccc---hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCC
Confidence 553 344 77777899999999999876443 122 1256777888522 22334555554
No 177
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=5.1e-24 Score=208.46 Aligned_cols=215 Identities=15% Similarity=0.146 Sum_probs=169.6
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (422)
+|+++...+|+++++++.|. ++.++++++++++..++.+++++||+|+++.|+|.... ..+...|++++.++
T Consensus 60 r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd-- 135 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE-- 135 (398)
T ss_pred CCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC--
Confidence 45777789999999999995 35677777789999999989999999999999998643 33456898888776
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+|++|..+.... .. ..+..+++.
T Consensus 136 ---~~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l----~~~~Divv~ 206 (398)
T PRK08249 136 ---TGDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PL----ALGADLVIH 206 (398)
T ss_pred ---CCCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-ch----hhCCCEEec
Confidence 368999999997 689999999999999999999999999987 99999999998654322 11 123348889
Q ss_pred cChhhhccccccc-eeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 280 S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
|+||.++..|.++ |++++++++++++...+.. ..++++.+..+...| +.+. +.++..++++.+.+.|++++.+
T Consensus 207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l---~tL~~R~~~~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM---KTLKLRVRQQQESAMALAKYLQTHPKV 283 (398)
T ss_pred cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 9999998667665 7788888998888765543 345666655554444 3445 6678889999999999987644
No 178
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=2.4e-23 Score=202.07 Aligned_cols=274 Identities=21% Similarity=0.189 Sum_probs=195.6
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 199 (422)
.+||++...+|+++++++. . ++.++++++++++..++.+++++||+|+++.|+|..+...+ ...|++++.++.
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 5689999999999999999 3 35555566678999999999999999999999998776544 347999999985
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
++.+ + .+. +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .... .+..+++
T Consensus 123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~-~p~~----~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQ-RPLE----LGADLVV 188 (366)
T ss_pred CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcccc-Cchh----cCCcEEE
Confidence 4321 1 222 578999999999999999999999999987 9999999999642211 1111 2334888
Q ss_pred ccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|+||.++ .+|+|+||+++ ++++++.+...+.. ..++++....+...|+. ++ +.++..++...+.+.|++++
T Consensus 189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---l~~R~~~~~~na~~la~~L~~~p 265 (366)
T PRK07582 189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---LGLRFARQCANALAVAELLAGHP 265 (366)
T ss_pred ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999874 46799999997 57888877655443 34566776666666653 44 66788899999999999877
Q ss_pred CCc-c-cCC----------------CceEEEEEeCCCCCHHHHHHHHHhCCcEEE---eCCC---------C---CCCCe
Q 014594 354 FLN-P-YPS----------------YSNFILCEVTSGMDAKKLKDDLAKMGVMIR---HYNN---------K---ELKGY 400 (422)
Q Consensus 354 ~~~-~-~p~----------------~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~---~~~~---------~---~~~~~ 400 (422)
.+. + +|. .|..+.+++. +.++..+.+.+.++... -|+. . ..++.
T Consensus 266 ~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~l 342 (366)
T PRK07582 266 AVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGF 342 (366)
T ss_pred CccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCe
Confidence 553 2 221 3556778884 45666666666666553 1111 0 12468
Q ss_pred EEEEecChh---hHHHHHHHHhh
Q 014594 401 VRVSVGKPE---HTDALMECLMH 420 (422)
Q Consensus 401 iRis~~~~~---~~~~l~~al~~ 420 (422)
||+|++.+. .+++|.+||++
T Consensus 343 iR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 343 VRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 999999643 34455566554
No 179
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=2.8e-24 Score=208.55 Aligned_cols=299 Identities=17% Similarity=0.139 Sum_probs=209.7
Q ss_pred cCCCCCCCCCCHHHHHHHhcC-CCCCCCCC--------c---chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 100 IDANENPYGPPPEVREALGQL-KFPYIYPD--------P---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~-~~~~~y~~--------~---~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
|+.+... ++++.+++++.+. ......|. . -..++|+.+++++++++++|++++|++++++.++.++.
T Consensus 2 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~ 80 (353)
T TIGR03235 2 LDHNATT-PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLA 80 (353)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 3343333 3568888888652 11111111 0 14589999999999998999999999999999998775
Q ss_pred C----CC-CEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 168 D----PG-DKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 168 ~----~g-d~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
. +| +.|++....|+.+. ..++..|++++.++.++++.+|++++++.++ ++++++++++++||||.+.+.++
T Consensus 81 ~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~ 159 (353)
T TIGR03235 81 RAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIRE 159 (353)
T ss_pred HhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHH
Confidence 3 55 77888876666443 3345579999999987778899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH--HH---------
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL--WR--------- 307 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l--~~--------- 307 (422)
+.++++. |+++|+|+++...... ..+...+.++++.|.+|.+|.+| +|+++++++..... ..
T Consensus 160 I~~l~~~~~~~~ivD~a~~~g~~~----~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T TIGR03235 160 IAEVLEAHEAFFHVDAAQVVGKIT----VDLSADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQER 233 (353)
T ss_pred HHHHHHHcCCEEEEEchhhcCCcc----ccccccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcC
Confidence 9999987 9999999998743221 11223345578889999776555 89999887753221 10
Q ss_pred hcCCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCC---ceEEEEEeCCCCCHHHHHHH
Q 014594 308 AKQPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPY-PSY---SNFILCEVTSGMDAKKLKDD 381 (422)
Q Consensus 308 ~~~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~---~~f~~~~~~~~~~~~~~~~~ 381 (422)
....++.+.....++.++++.. +..+ .+++++++++++++.|++.++ .+. +.. ...+.+.++ +.+.+++.+.
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~-~~~~~~v~~~ 311 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSID-GVNSEALIVN 311 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeC-CcCHHHHHHH
Confidence 0113455555555555555432 2344 788999999999999988553 332 222 234555555 6788899999
Q ss_pred HHhCCcEEEeCCCCCC----CCeEEEEecChh
Q 014594 382 LAKMGVMIRHYNNKEL----KGYVRVSVGKPE 409 (422)
Q Consensus 382 L~~~gI~v~~~~~~~~----~~~iRis~~~~~ 409 (422)
|.+ ||.+++|..+.. ..++|.+++..+
T Consensus 312 L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~ 342 (353)
T TIGR03235 312 LRA-DAAVSTGSACSSSKYEPSHVLQAMGLDT 342 (353)
T ss_pred HhC-CeEEEchhhcCCCCCCCCHHHHHcCCCH
Confidence 965 899998766322 346788887654
No 180
>PRK07505 hypothetical protein; Provisional
Probab=99.93 E-value=3.9e-23 Score=203.88 Aligned_cols=310 Identities=15% Similarity=0.110 Sum_probs=204.1
Q ss_pred CCCCCeEEcCCCCCC-CCCCHHHHHHHhc-CC-CC--CC------CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 92 RKPEDIVKIDANENP-YGPPPEVREALGQ-LK-FP--YI------YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~-~~~~~~v~~al~~-~~-~~--~~------y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
.+++.++|+..+... +..+|++++++.+ +. ++ .. +......+++++|+++++. +.++++ +++++..
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~-sG~~a~~ 119 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFT-SCSAAHL 119 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEEC-ChHHHHH
Confidence 456778999765322 2568999988876 22 21 11 1122357899999999986 444454 5566777
Q ss_pred HHHHHhc----CCCC-EEEEcCCCchhH-H--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594 161 LIMRCVL----DPGD-KIVDCPPTFTMY-E--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (422)
Q Consensus 161 ~~~~~l~----~~gd-~Vl~~~p~y~~~-~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (422)
.+++.+. .+|+ .|++....|+.. . ......+.+++.+|. .|++.+++.++ .+++++++++|+||||
T Consensus 120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G 193 (402)
T PRK07505 120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG 193 (402)
T ss_pred HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence 7766432 2232 366666666432 1 111224567777763 48999999886 5678999999999999
Q ss_pred cCCCHHHHHHHHcC-CCeEEEccCCccccC--CCc--hhhhhh--cCCcEEEEccChhhhccccccceeeec-CHHHHHH
Q 014594 233 SIINDEDLLKILEM-PILVVLDEAYTEFSG--LES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY 304 (422)
Q Consensus 233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~--~~~--~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~ 304 (422)
.+++.+++.+|++. ++++|+||+|....+ .+. ...... .++++++++|+||.++.+| ||+++ ++++++.
T Consensus 194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~ 270 (402)
T PRK07505 194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL 270 (402)
T ss_pred CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence 99999999999987 999999999864322 111 122233 3577899999999998776 88764 7888888
Q ss_pred HHHhcCCC----CCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE---EEEEeCCCCC
Q 014594 305 LWRAKQPY----NVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCEVTSGMD 374 (422)
Q Consensus 305 l~~~~~~~----~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f---~~~~~~~~~~ 374 (422)
+.....++ ++++++..++.++++ ..+++. ..++++++.+.+.+.+.. +..+++ .++.++...+
T Consensus 271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~g~~~~i~~~~~~~~~~ 343 (402)
T PRK07505 271 ILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT-------EQSGSFLPIRLIYIGDEDT 343 (402)
T ss_pred HHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh-------cCCCCCCCEEEEEeCCHHH
Confidence 87766654 355677777777775 334443 555555555444333211 112333 2334332224
Q ss_pred HHHHHHHHHhCCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 375 AKKLKDDLAKMGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.++.+.|.++||.++++..+. ..+++||+++ +.++++++.++|+.
T Consensus 344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~ 395 (402)
T PRK07505 344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE 395 (402)
T ss_pred HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence 6789999999999999874432 2369999998 67777777777764
No 181
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=8.7e-24 Score=208.52 Aligned_cols=313 Identities=16% Similarity=0.195 Sum_probs=213.0
Q ss_pred CCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++.++|+..| ...+ ..+|++.+++.+ +... ..+..+...++.+.|++..+ .+.+++++++++|++.++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~ 114 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF 114 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence 457789999776 2223 367888888776 2211 11222335678888888775 369999999999999999
Q ss_pred HHhc--------CCCCEEEEcCCCchhHHHHH-HHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594 164 RCVL--------DPGDKIVDCPPTFTMYEFDA-AVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (422)
Q Consensus 164 ~~l~--------~~gd~Vl~~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (422)
+... ...++|+..+..|++....+ ...| ..++.++ .-|++.+++.+. +++++|
T Consensus 115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aai 188 (403)
T PRK05093 115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-----FNDLAAVKAVID-DHTCAV 188 (403)
T ss_pred HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-----CCCHHHHHHHhc-CCeEEE
Confidence 9431 12356888888887543322 2111 1122222 127899999886 678888
Q ss_pred EEeCCCCccCcCC--CHHHHHHH---HcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcccccccee
Q 014594 223 FLTSPNNPDGSII--NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 223 ~l~~p~NPtG~~~--~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
+++ |.||+|.++ +.+.+++| |+. |+++|+||+|.++.+.+.... .....+. +.||||.++ +|+|+||
T Consensus 189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~s~sK~l~-~G~rig~ 263 (403)
T PRK05093 189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD---ILTSAKALG-GGFPIGA 263 (403)
T ss_pred EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC---EEEeccccc-CCcceEE
Confidence 887 777787765 65555554 544 999999999998865443221 1111122 568999999 8999999
Q ss_pred eecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEE
Q 014594 295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE 368 (422)
Q Consensus 295 i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~ 368 (422)
+++++++++.+..... .++.+++.|.++.++|+.....+..++++++++++.+.|++++ .....+..|.++|+.
T Consensus 264 vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~ 343 (403)
T PRK05093 264 MLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAE 343 (403)
T ss_pred EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEE
Confidence 9999999988865322 3677899999998877532111166788888999999888753 112345678999999
Q ss_pred eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 369 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 369 ~~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++.. +..++++.|.++||.+.+.. .+++||+++...+.+++.+++++|
T Consensus 344 l~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l 394 (403)
T PRK05093 344 LKPQYKGRARDFLNAAAEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARF 394 (403)
T ss_pred ecCcchhHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 86432 56789999999999998743 479999866543346666666654
No 182
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=1e-23 Score=205.38 Aligned_cols=279 Identities=19% Similarity=0.203 Sum_probs=203.4
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (422)
+|+++...+|++++++++|. ++.++++++++|+..++.+++++||+|+++.+.|..... .+...|+++..++.+
T Consensus 36 r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 113 (369)
T cd00614 36 RIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD 113 (369)
T ss_pred CCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence 34667789999999999985 467778888999999999999999999999999975443 345689999888742
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ... ..+.++++.
T Consensus 114 -----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~ 182 (369)
T cd00614 114 -----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVH 182 (369)
T ss_pred -----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEe
Confidence 5899999997 589999999999999999999999999987 9999999999854321 111 234568999
Q ss_pred cChhhhcccc-ccceeeecCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|+||.++.+| .+.||+++++ ++++++..... .+.+++..+.++...|+ .+. +.++..++.+++.+.|++++.
T Consensus 183 S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~---tl~~r~~~~~~na~~la~~L~~~~~ 259 (369)
T cd00614 183 SATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK---TLPLRMERHSENALKVAEFLEKHPK 259 (369)
T ss_pred ccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999987665 7899999977 88888876554 35567777666666664 344 777888999999999998874
Q ss_pred Cc-c-cC----------------CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------C-----
Q 014594 355 LN-P-YP----------------SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------K----- 395 (422)
Q Consensus 355 ~~-~-~p----------------~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~---------------~----- 395 (422)
+. + +| ..|..+.+.+.+ .....+|.+.|.--++.+.-|+. .
T Consensus 260 v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 339 (369)
T cd00614 260 VERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERA 339 (369)
T ss_pred ccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHH
Confidence 42 2 33 246777788852 12233444444311111111110 0
Q ss_pred --C-CCCeEEEEecChhhHHHHHHHHhh
Q 014594 396 --E-LKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 396 --~-~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+ .++.+|+|++.++ .|+|.+.|++
T Consensus 340 ~~g~~~~liR~svGlE~-~~dl~~dl~~ 366 (369)
T cd00614 340 AAGITPGLVRLSVGIED-VEDLIADLEQ 366 (369)
T ss_pred hcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence 1 1468999999864 4666665543
No 183
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=1e-23 Score=206.23 Aligned_cols=216 Identities=15% Similarity=0.144 Sum_probs=168.9
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|++++++++|.+ ..++++++++++..++.+++++||+|+++.|.|.. +...+...|+++..++.
T Consensus 54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 4568888899999999999964 46778888899999999999999999999998853 34445568999998875
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
+ |++.+++++. +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|....... .. ..+..+++
T Consensus 132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence 3 7899999997 689999999999999999999999999987 99999999998543221 11 22344889
Q ss_pred ccChhhhcccccc-ceeeecCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594 279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352 (422)
Q Consensus 279 ~S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~--~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~ 352 (422)
.|+||.++.+|.+ .|+++++++++++++.... . ..+++.....+...|+ .+. +.++.+++.+.+.+.|+++
T Consensus 201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---tl~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---TLNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999988876 5788889999888875321 2 2345555554544443 234 6777888899999999887
Q ss_pred CCC
Q 014594 353 PFL 355 (422)
Q Consensus 353 ~~~ 355 (422)
+.+
T Consensus 278 p~v 280 (391)
T TIGR01328 278 PAV 280 (391)
T ss_pred CCc
Confidence 644
No 184
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=1.8e-23 Score=204.54 Aligned_cols=215 Identities=19% Similarity=0.168 Sum_probs=167.6
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (422)
+|+++...++++.+++++|. +++++++|+++|+..++.+++++||+|+++.+.|.... ..+...|++++.++.+
T Consensus 57 r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 34566678999999999995 46899999999999999999999999999999886433 3455689999999752
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... .. ..+..+++.
T Consensus 135 -----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~ 203 (390)
T PRK08133 135 -----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIH 203 (390)
T ss_pred -----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEe
Confidence 7899999997 789999999999999999999999999987 99999999987543221 11 123358899
Q ss_pred cChhhhccccccc-eeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 280 S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
|+||.++.+|.++ |++++++++++++...... ..+++..+.. +++.-+.+. +.++..+++..+.+.|++.+.+
T Consensus 204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 204 SATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKGLETLSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred ecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcccchHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999998888887 6777888887776644333 3345554443 333334555 7777888999999999987544
No 185
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.2e-23 Score=207.79 Aligned_cols=310 Identities=16% Similarity=0.111 Sum_probs=209.3
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 98 VKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
+.|+.+... ++++.+.+++.+ +. ....-+. ....++|+++++++|.++++|++++|+++++++++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 678776654 466888888865 21 1000010 12457899999999998899999999999999988
Q ss_pred HHhc----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
.++. ++||+|+++.++|+.....+ +..|++++.++.++++.+|+++++++++ ++++++++++++||||.+.|
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~ 162 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD 162 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence 7763 78999999999997664433 3469999999987777899999999997 68999999999999999999
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------- 308 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~------- 308 (422)
.++|.++++. |+++|+|++++..... . .+...+-.+++.|++|.+| |+ ++|+++++++....+...
T Consensus 163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~ 236 (404)
T PRK14012 163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHE 236 (404)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCcc
Confidence 9999999987 9999999999742211 1 1112234477779999776 43 589988876543222111
Q ss_pred --cCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC------CCceEEEEEeCCCCCHHHH
Q 014594 309 --KQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYP------SYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 309 --~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p------~~~~f~~~~~~~~~~~~~~ 378 (422)
....+.+.....+..++++. ..+.+ ..++.++.++++.+.|++++.+.+.+ ....++++.+. +.+++
T Consensus 237 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~ 313 (404)
T PRK14012 237 RGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV---EGESL 313 (404)
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc---CHHHH
Confidence 01122333333333333322 12233 77788888999999998876544321 11224555543 34567
Q ss_pred HHHHHhCCcEEEeCCCC-------------------CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 379 KDDLAKMGVMIRHYNNK-------------------ELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~~~-------------------~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
...|. ++.|+.+... ...+.|||++.. .++.|++.++|+.
T Consensus 314 ~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 314 IMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 66663 6666544221 124789999874 4566666666654
No 186
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=9.2e-24 Score=205.73 Aligned_cols=304 Identities=18% Similarity=0.134 Sum_probs=214.4
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 99 KIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
.|+.+... +.++.+++++.+. ......|. .-..++|+.+++++|.++++|++|+|++++++.++..+
T Consensus 2 Yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 2 YLDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred cccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 45554443 4678888888752 11111111 11457899999999998899999999999988877654
Q ss_pred ----cCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 167 ----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 167 ----~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
.++||+|++....|+.+... ....|++++.++.++++.+|+++++++++ ++++++++++++|+||.+.|.++
T Consensus 81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHH
Confidence 47899999999778654332 33579999999977777899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------c
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K 309 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------~ 309 (422)
+.++++. |+++++|.+++.... ...+...+.++++.|..|.+| ...+|+++++++....+... .
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~----~~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~ 233 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKI----PVDVDDLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGR 233 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCc----ccCcccCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCc
Confidence 9999987 999999999984321 111223455688899999433 34589998887655443211 1
Q ss_pred CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-C---C--CceEEEEEeCCCCCHHHHHH
Q 014594 310 QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKD-VPFLNPY-P---S--YSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p---~--~~~f~~~~~~~~~~~~~~~~ 380 (422)
..++.+.....++.++|+.- +..+ +.++.++.++++.+.|++ ++.+.+. | . ....+.+.++ +.+++++..
T Consensus 234 ~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 312 (364)
T PLN02651 234 RSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA-YVEGESLLM 312 (364)
T ss_pred cCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC-CCCHHHHHH
Confidence 23566766666666666431 1224 778889999999999875 5445433 2 1 1336667776 678899999
Q ss_pred HHHhCCcEEEeCCCC--C-----------------CCCeEEEEecChhhHHH
Q 014594 381 DLAKMGVMIRHYNNK--E-----------------LKGYVRVSVGKPEHTDA 413 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~--~-----------------~~~~iRis~~~~~~~~~ 413 (422)
.|.+ |.++.|... . ..+.+|+|++.-.+.++
T Consensus 313 ~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~d 362 (364)
T PLN02651 313 GLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEE 362 (364)
T ss_pred HhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHH
Confidence 9865 888866531 1 13799999985443343
No 187
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.93 E-value=3.7e-23 Score=203.07 Aligned_cols=216 Identities=16% Similarity=0.170 Sum_probs=168.5
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|++++++++|.+ ..+++++++.++..++.+++++||+|+++.|.|.. +...++..|++++.++.
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 4567778899999999999974 35666778889999999899999999999998853 33345568999999875
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|+++++++++ +++|+|++++|+||||.+.+.++|.++++. |+++|+|++|...... ... ..+.++++
T Consensus 138 -----~d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l----~~g~Di~v 206 (403)
T PRK07503 138 -----TDPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPL----ELGADLVV 206 (403)
T ss_pred -----CCHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCCEEE
Confidence 27899999997 689999999999999999999999999987 9999999999854322 112 12345899
Q ss_pred ccChhhhcccc-ccceeeecCHHHHHHHHHh--cC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~--~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~ 352 (422)
.|+||.++.+| .+.|+++.+++++++++.. .. ...++++.+..+...| +.+. +.++..++...+.+.|+++
T Consensus 207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGL---KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc---chHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998765 7889999999988887632 22 2456666665555444 3344 6666678888999999887
Q ss_pred CCC
Q 014594 353 PFL 355 (422)
Q Consensus 353 ~~~ 355 (422)
+.+
T Consensus 284 p~v 286 (403)
T PRK07503 284 PAV 286 (403)
T ss_pred CCc
Confidence 644
No 188
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.6e-23 Score=203.71 Aligned_cols=216 Identities=17% Similarity=0.164 Sum_probs=169.2
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++....|+++++++.|. +++++ ++++++++.+++.+++++||+|+++.|+|.. +...+...|.+++.++.
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~-~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG-AGGVI-TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC-CceEE-EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 456777788999999999996 34555 4555799999999999999999999999975 44455667888888874
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|++++++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... ... ..+..+++
T Consensus 133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence 47899999997 689999999999999999999999999987 9999999999853211 111 12334899
Q ss_pred ccChhhhccc-cccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~-G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|.+|.++.+ ++..|++++ ++++.+++...... ++++++.+.++...+ +|++ +.++..++...+.+.|++++
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl---~tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL---RTLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999998755 467888877 57777777654433 456777766655444 5777 88899999999999999876
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 279 ~v 280 (405)
T PRK08776 279 AV 280 (405)
T ss_pred Ce
Confidence 54
No 189
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.92 E-value=4.8e-23 Score=190.13 Aligned_cols=294 Identities=16% Similarity=0.213 Sum_probs=190.4
Q ss_pred CCC-CCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHH-HHH-HHHh----cC--------CCCEEEEcCCCchhHHHHH
Q 014594 124 YIY-PDP-ESRRLRAALAKDSGLESDHILVGCGADELI-DLI-MRCV----LD--------PGDKIVDCPPTFTMYEFDA 187 (422)
Q Consensus 124 ~~y-~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al-~~~-~~~l----~~--------~gd~Vl~~~p~y~~~~~~~ 187 (422)
..| +.. |.+++|+.+++.+|+++++|+++.+++-.+ .-+ .+++ .. +.=+.|++.|+|..+..++
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~ 141 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT 141 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence 668 443 799999999999999999999877765433 222 2222 11 1135799999999999999
Q ss_pred HHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC-----CCeEEEccCCcc--
Q 014594 188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTE-- 258 (422)
Q Consensus 188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~-----~~~li~Deay~~-- 258 (422)
+.+|++.+.||+.++ ++|.|.+|+.+. .+..|.|+++ .-+||||.+++.|..++++.. +..|+-|.+|.-
T Consensus 142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh 220 (425)
T PF12897_consen 142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH 220 (425)
T ss_dssp HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence 999999999998665 899999999984 4678999866 558999999999999999975 899999999974
Q ss_pred ccCCCc------hhh---hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHcc
Q 014594 259 FSGLES------RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (422)
Q Consensus 259 ~~~~~~------~~~---~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~ 327 (422)
+..+.. .+. ..+..++++.+.|.||.- .+|.+++++.++++.++.+.+... ..+..-+.|..-...+.
T Consensus 221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~ 299 (425)
T PF12897_consen 221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK 299 (425)
T ss_dssp SSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred ccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence 322211 111 123578899999999964 699999999999998888876543 45677889999999998
Q ss_pred CCh-HH----H-HHHHHHHHHHHHHHHHcc-CC----CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-
Q 014594 328 NPI-YL----E-VKEALIKERERLFKLLKD-VP----FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN- 394 (422)
Q Consensus 328 ~~~-~~----~-~~~~~~~~~~~l~~~L~~-~~----~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~- 394 (422)
+.+ .+ + .++.++-+.+.+.+.|.+ ++ ... ..|.+|+|++++..++ .+.++.+.+++.||.+.+.+.
T Consensus 300 d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-~AkrvV~lakeAGV~LT~AGAt 378 (425)
T PF12897_consen 300 DAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-TAKRVVELAKEAGVALTPAGAT 378 (425)
T ss_dssp SHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT--HHHHHHHHHHTTEE---TTTT
T ss_pred ChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-hHHHHHHHHHHhCceeCCCCCC
Confidence 854 33 3 444455555555555543 33 222 3689999999999865 689999999999999997443
Q ss_pred -----CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 395 -----KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 395 -----~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
...+..|||+.+.+. .++|..|++.+
T Consensus 379 fPyg~DP~D~nIRiAPS~P~-leel~~Am~~~ 409 (425)
T PF12897_consen 379 FPYGKDPRDSNIRIAPSYPS-LEELETAMDVF 409 (425)
T ss_dssp SGGG--TTS-EEEE--SSS--HHHHHHHHHHH
T ss_pred CCCCCCCCCCcEEecCCCCC-HHHHHHHHHHH
Confidence 344679999999876 58888888754
No 190
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.92 E-value=4.5e-23 Score=203.59 Aligned_cols=315 Identities=13% Similarity=0.110 Sum_probs=213.8
Q ss_pred CCCCCeEEcCCCCCCCC---CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~---~~~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++.++|+.++..... .+|++.+++.+ +. ... .++.+...+|.++++++.+. +.+++++++++|++.++
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al 115 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI 115 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence 45678899877744333 37888887765 22 111 12334467899999999874 58999999999999999
Q ss_pred HHhcC---------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594 164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK 220 (422)
Q Consensus 164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (422)
+.+.. +| ++|++...+|++....+...+. .+..++ ..|++.+++.+. ++++
T Consensus 116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~ 189 (401)
T PRK00854 116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV 189 (401)
T ss_pred HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence 97642 23 6788888888754433322221 122222 248999999997 6899
Q ss_pred EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccce
Q 014594 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG 293 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G 293 (422)
+|++++|+||+|.+++ .+++.++|+. |+++|+||+|..+...+.... ..+.....++ ++|.++...+|+|
T Consensus 190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~---~~K~l~gg~~~ig 266 (401)
T PRK00854 190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL---IGKALSGGFYPVS 266 (401)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE---ecccccCCccCeE
Confidence 9999999999999998 5666667765 999999999987755442211 1111222232 4698874337999
Q ss_pred eeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEe
Q 014594 294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEV 369 (422)
Q Consensus 294 ~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~ 369 (422)
++++++++++.+..... .++.+++.+.++.++|+..+-.+..+.++++.+++.+.|++++...+ ....|.++.+.+
T Consensus 267 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~ 346 (401)
T PRK00854 267 AVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVEL 346 (401)
T ss_pred EEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEE
Confidence 99999999887753322 36678999999999886422111677888888999999988653211 234455555555
Q ss_pred -CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 370 -TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 370 -~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++..+..++.+.|.++||.+.+.. .+++|+++....+.+++++++++|
T Consensus 347 ~~~~~~~~~~~~~L~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l 395 (401)
T PRK00854 347 EPEAGGARQYCEALKERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI 395 (401)
T ss_pred ecCchhHHHHHHHHHHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence 323457889999999999997643 479999975322234455555544
No 191
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=4.7e-23 Score=200.29 Aligned_cols=216 Identities=16% Similarity=0.128 Sum_probs=170.3
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-HHHH---HHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~g~~~~~v~~ 199 (422)
.+|+++....|++++|++.| .+++++++|+++++..++.+++++||+|+++.|+|.. +... ....|++++.++
T Consensus 48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 124 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD- 124 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC-
Confidence 56788889999999999999 4799999999999999999999999999999999985 3322 233578888876
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
..|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|........ . ..+..+++
T Consensus 125 ----~~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~p-l----~~GaDivv 194 (388)
T PRK08861 125 ----QSDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKP-L----ELGADFVI 194 (388)
T ss_pred ----CCCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCC-c----ccCCCEEE
Confidence 258999999997 689999999999999999999999999987 999999999985432211 1 23455899
Q ss_pred ccChhhhccc-cccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~-G~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++.+ ++..|+++++ +++.++++..+.. ..++++....+...| +-+. +.++..++...+.+.|++.+
T Consensus 195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---~Tl~lR~~~~~~~a~~~a~~L~~~p 271 (388)
T PRK08861 195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI---RTLGARMRVHEESAQQILAYLQTQS 271 (388)
T ss_pred eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999987643 4678998874 5677767655444 345666655444444 4455 77888999999999999886
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 272 ~v 273 (388)
T PRK08861 272 LV 273 (388)
T ss_pred Ce
Confidence 54
No 192
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=4.7e-23 Score=204.71 Aligned_cols=318 Identities=18% Similarity=0.167 Sum_probs=211.7
Q ss_pred CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
..+++.++|+..+.... ..+|.+.+++.+ +.....| +.++..+|+++|++++.. .++|++++|++++++.+++
T Consensus 44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk 122 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR 122 (423)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence 34678899998886443 467889988876 3322233 556788999999999864 3689999999999999988
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCC---------CC---CCCHHHHHHHhhc--CCCeEEEEe
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKS---------DF---SLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~---------~~---~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
... ...++|+...++|+.+...+.. .|......+... .. ..|++++++.+.+ .++++|+++
T Consensus 123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e 202 (423)
T TIGR00713 123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE 202 (423)
T ss_pred HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence 532 2458999999999876543322 111111111000 00 1278999998863 467889887
Q ss_pred -CCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 -SPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 -~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
.|+| +|.+.+. +++.++++. |+++|+||+|..|..+.. ........++ +.+|||.++ +|+|+||++++
T Consensus 203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~ 277 (423)
T TIGR00713 203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR 277 (423)
T ss_pred CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence 7788 8988883 455556665 999999999998854221 1112222222 347999999 99999999999
Q ss_pred HHHHHHHHHh-----cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe
Q 014594 299 LSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 369 (422)
Q Consensus 299 ~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~ 369 (422)
+++++.+... ...++.+++++.++.++|+ +.++.+ .++.....++.+.+.+++++........|.++.+.+
T Consensus 278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~ 357 (423)
T TIGR00713 278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFF 357 (423)
T ss_pred HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEE
Confidence 9999888632 1346789999998888876 344666 777777788888888887765432233454544433
Q ss_pred CC-C---------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 370 TS-G---------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 370 ~~-~---------~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.. . .+ ...+.+.|.++||.+.+.. .+.+|+++... .+++.+++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~l~~~~t--~~~i~~~~~~ 415 (423)
T TIGR00713 358 TEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ----FEACFLSAAHT--EEDIENTIEA 415 (423)
T ss_pred ecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC----ccceeeECCCC--HHHHHHHHHH
Confidence 21 0 12 2357778889999987543 24688887532 2344444443
No 193
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.92 E-value=4.3e-23 Score=202.27 Aligned_cols=216 Identities=16% Similarity=0.145 Sum_probs=170.8
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc----hhHHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|+++++++.|.+ +.+++++++.++..++.+++++||+|+++...| ..+...++..|++++.++.
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 4578888899999999999953 778888888999999988999999999887544 4555667778999999973
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|........ . ..+.++++
T Consensus 143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence 38999999997 689999999999999999999999999987 999999999985443221 1 22456899
Q ss_pred ccChhhhccccccc-eeeecCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++..|.++ |+++++++.+. .+..... ...++++.+..+...|+ .+. +.++..++..++.+.|++.+
T Consensus 212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---tl~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---TLALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999998778886 88888877664 3443222 24567777776666664 344 77778888888999999876
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 289 ~v 290 (403)
T PRK07810 289 AV 290 (403)
T ss_pred Cc
Confidence 54
No 194
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=3.3e-23 Score=194.58 Aligned_cols=313 Identities=19% Similarity=0.163 Sum_probs=227.9
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcC-CC--C-----CCCCCc---chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH-
Q 014594 98 VKIDANENPYGPPPEVREALGQL-KF--P-----YIYPDP---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC- 165 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~--~-----~~y~~~---~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~- 165 (422)
|+||.+... +..|++.+++... .. + |.|+.. ..++-|+.+|+.+|+++++|++|+|+||+.+++++.
T Consensus 3 iYlD~~ATT-p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 3 IYLDNAATT-PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA 81 (386)
T ss_pred ccccccccC-CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhh
Confidence 667766543 3468888888652 11 1 223211 145789999999999999999999999999999987
Q ss_pred -hcC----CCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 166 -VLD----PGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 166 -l~~----~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
... .|..|+++.-.|+.....++. .|.+|.++|.+.+..+|+++|+++++ ++|.+|.+.+.||.||.+.|.
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQpI 160 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQPI 160 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeecccH
Confidence 322 467899999899866665555 49999999988888999999999998 789999999999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-HH------Hhc
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LW------RAK 309 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-l~------~~~ 309 (422)
+++.++++. ++++++|.++... ...-.+.....++...|-+|.+|..| +|.++.++.+.-. +. +-.
T Consensus 161 ~ei~~i~k~~~i~fHvDAvQa~G----kipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~ 234 (386)
T COG1104 161 AEIGEICKERGILFHVDAVQAVG----KIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGL 234 (386)
T ss_pred HHHHHHHHHcCCeEEEehhhhcC----ceeccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCC
Confidence 999999997 9999999998832 22222223234466677789988777 7888875543211 11 112
Q ss_pred CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccC-CCCcccCC----CceEEEEEeCCCCCHHHHHHHH
Q 014594 310 QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDV-PFLNPYPS----YSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~-~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L 382 (422)
+..+.|..+..+...+++.. +.++ ...++...|+++.+.|.+. +.+.+... -.+.+.+.+| +...+.+...|
T Consensus 235 RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~-gv~gE~ll~~L 313 (386)
T COG1104 235 RSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP-GVEGESLLLAL 313 (386)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC-CCcHHHHHHhc
Confidence 33567788877777777653 3344 7788999999999999975 54444322 2355677887 77899999999
Q ss_pred HhCCcEEEeCCCCC-------------------CCCeEEEEecChhhHHHHHHHHh
Q 014594 383 AKMGVMIRHYNNKE-------------------LKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 383 ~~~gI~v~~~~~~~-------------------~~~~iRis~~~~~~~~~l~~al~ 419 (422)
..+||.+..|+.+. ..+.||||++...+.++++.+++
T Consensus 314 ~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~ 369 (386)
T COG1104 314 DLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAE 369 (386)
T ss_pred cccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHH
Confidence 99999999776611 13689999985433344444443
No 195
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=6.9e-23 Score=202.25 Aligned_cols=321 Identities=12% Similarity=0.094 Sum_probs=209.1
Q ss_pred CCCCCeEEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++++|+..+..... .+|++.+++.+. . ..+. +..+....+++.++++.+. +.+++++++++|++.++
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al 105 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL 105 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence 35678899988754433 578899888762 2 1111 1223456788888888764 58999999999999999
Q ss_pred HHhcC----------CCCEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCC----CCCCHHHHHHHhhcCCCeEEEEe
Q 014594 164 RCVLD----------PGDKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 164 ~~l~~----------~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+.... .+++|+..+-.|+........ .+..... .+...+ ...|++++++.++.+++++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 96631 347788888888754433222 2211110 010001 12389999999864679999999
Q ss_pred CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
+++||||.+++ .+++.++++. |+++|+||+|..+...+..... ....+.++ ++||.++.+++|+||++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~---~~sK~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV---LLGKALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE---EEcccccCCCcCcEEEEEc
Confidence 99999999998 6777777776 9999999999877543322111 11122222 4789998444599999999
Q ss_pred HHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCC-
Q 014594 299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS- 371 (422)
Q Consensus 299 ~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~- 371 (422)
+++++.+.... ..++.+++.+.++.++|+.-.-....++.+++.+.+.+.|++ .+.+......|.++++.++.
T Consensus 263 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~ 342 (400)
T PTZ00125 263 DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHS 342 (400)
T ss_pred HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccC
Confidence 99998876433 246778888888877764311001334444455555555544 34333234567888888863
Q ss_pred -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 -~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..+..++.+.|.++||.+.++. .+++||++....+.+++++++++|
T Consensus 343 ~~~~~~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l 389 (400)
T PTZ00125 343 DGVNAWDLCLKLKENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEII 389 (400)
T ss_pred cchHHHHHHHHHHHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 3467788999999999998754 579999965322234455555543
No 196
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=3e-22 Score=196.16 Aligned_cols=307 Identities=13% Similarity=0.113 Sum_probs=204.8
Q ss_pred CCCCCHHHHHHHhc-C-CCC-------CCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594 106 PYGPPPEVREALGQ-L-KFP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (422)
Q Consensus 106 ~~~~~~~v~~al~~-~-~~~-------~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~ 175 (422)
.+..+|+++++..+ + .++ ..|+.. ...+|++++++++|.+ +.+++++|.+... .++.+++++||.|++
T Consensus 10 gl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~~~GD~Vl~ 87 (392)
T PLN03227 10 STSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFAKRGDLLVV 87 (392)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhCCCCCEEEE
Confidence 34556777766554 2 111 224433 5789999999999964 6788888877777 566668999999999
Q ss_pred cCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----------cCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----------~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+.+.|..+...+...+++++.++..+ .-|++.+.+.+. ..++++|+++++.||+|.+.+.+++.++++
T Consensus 88 ~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~ 165 (392)
T PLN03227 88 DRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKE 165 (392)
T ss_pred eccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHH
Confidence 99999988877777888888776421 123444444442 136789999999999999999999999998
Q ss_pred C-CCeEEEccCCccccCCC---chhhhh---hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC--
Q 014594 246 M-PILVVLDEAYTEFSGLE---SRMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV-- 314 (422)
Q Consensus 246 ~-~~~li~Deay~~~~~~~---~~~~~~---~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~-- 314 (422)
. |+++|+||+|.....+. ...... +..+.++++.|+||.+| .+.|++++++++++.+..... .++.
T Consensus 166 ~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~~~~~~~~~~~~ 242 (392)
T PLN03227 166 EFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRLSGSGYCFSASA 242 (392)
T ss_pred HcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHHhCcCccccCCC
Confidence 7 99999999998221111 111211 12345789999999766 445999999998877754432 2433
Q ss_pred cHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCc----------ccCCCceEEEEEeCCCCC---------
Q 014594 315 SVAAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLN----------PYPSYSNFILCEVTSGMD--------- 374 (422)
Q Consensus 315 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~----------~~p~~~~f~~~~~~~~~~--------- 374 (422)
++..+.++.+++.. .+..+.+++++++.+++.+.|++.+... .....++++.+.+.+...
T Consensus 243 ~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 322 (392)
T PLN03227 243 PPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLI 322 (392)
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhH
Confidence 36666666666643 2222277788999999999997532110 112356778888753111
Q ss_pred HHHHHHHHHhCCcEEEeCCC-------CCCCCeEEEEecChhhHHHHHHHHh
Q 014594 375 AKKLKDDLAKMGVMIRHYNN-------KELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~~~~~-------~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
..++.+.|.++|+.+.+... ...+..+|+++...-+.++++++++
T Consensus 323 ~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~ 374 (392)
T PLN03227 323 LDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLT 374 (392)
T ss_pred HHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHH
Confidence 24788889999999975321 1225789999874333344444443
No 197
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=8.1e-23 Score=199.87 Aligned_cols=276 Identities=16% Similarity=0.120 Sum_probs=198.6
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|+++++++.|. +++++++|+++++..++.+++++||+|+++.|+|..+.. .+...|++++.++.
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 456888889999999999994 589999999999999999999999999999999986553 45668999998873
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
. +.+.+++.++ +++|+|++++|+||+|...+.+++.++++. |+++|+|++|.....- .. . ..+.++++
T Consensus 138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~---l-~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KP---F-EHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CH---H-HcCCeEEE
Confidence 2 4578888887 789999999999999999999999999987 9999999999753321 11 1 23456999
Q ss_pred ccChhhhcc-ccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++. .+.+.|++++ ++++.++++..+.. .+.++.....+...|+ .+. +.++..++...+.+.|++.+
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~---tl~~Rl~~~~~~a~~la~~L~~~p 283 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP---SLQVRLAAHDRSALEVAEWLKARP 283 (394)
T ss_pred EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998752 3356887776 67888888755543 3456655544444333 233 67777788888999998765
Q ss_pred CCc-c-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-----------------C
Q 014594 354 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN-----------------K 395 (422)
Q Consensus 354 ~~~-~-~p----------------~~~~f~~~~~~~~---~~~~~~~~~L~~~gI~v~~~~~-----------------~ 395 (422)
.+. + +| ..+..+.+.+..+ .+.++|.+.|...++.+.-|+. .
T Consensus 284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~ 363 (394)
T PRK07050 284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWP 363 (394)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcC
Confidence 432 1 12 1233445666432 3456777777666665543332 0
Q ss_pred CCCCeEEEEecChhhHHHHHH
Q 014594 396 ELKGYVRVSVGKPEHTDALME 416 (422)
Q Consensus 396 ~~~~~iRis~~~~~~~~~l~~ 416 (422)
..++.||||++.+.. |+|.+
T Consensus 364 ~~~~~iR~svGlE~~-~dl~~ 383 (394)
T PRK07050 364 HRGTLVRLYIGLEDE-ADLIA 383 (394)
T ss_pred CCCCEEEEEeCcCCH-HHHHH
Confidence 123689999997542 44433
No 198
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=5.1e-22 Score=188.05 Aligned_cols=308 Identities=19% Similarity=0.162 Sum_probs=239.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594 104 ENPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (422)
..|.+.+++|++++..-..+++-|+.. ..++.+.+...++.+. +-++++++++.+++.++.++++|||+|++...+.
T Consensus 11 PGP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~ 90 (383)
T COG0075 11 PGPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGK 90 (383)
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCh
Confidence 456777899999998754445656652 6789999999999764 5677778899999999999999999999877765
Q ss_pred h--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594 181 T--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 181 ~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay 256 (422)
. .+..+++.+|++++.+..+++..+|+++++++++ .++.++|.++|...+||...|.++|.++++. |.++|+|.+-
T Consensus 91 FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVs 170 (383)
T COG0075 91 FGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVS 170 (383)
T ss_pred HHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecc
Confidence 4 6778899999999999988888999999999997 3578899999999999999999999999997 9999999986
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHh--------------------cCCCCCc
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVS 315 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~--------------------~~~~~~~ 315 (422)
+..+ ..-.+++++-++++.+-.|+++. || +|++..+++.++.+... ..+++++
T Consensus 171 S~Gg----~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tpp 244 (383)
T COG0075 171 SLGG----EPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPP 244 (383)
T ss_pred cCCC----cccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCC
Confidence 6322 11223456777999999999975 45 78888888877766532 2246777
Q ss_pred HHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC---c-eEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594 316 VAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 316 ~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~f~~~~~~~~~~~~~~~~~L~-~~gI 387 (422)
.....++..+|+. .+.++ +.++++++.+.+++.++++|+-... .. . .-..+..|++.+..++...++ ++|+
T Consensus 245 v~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~ 323 (383)
T COG0075 245 VNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVPEGVDDKKVRRALLKEYGV 323 (383)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECCCCCCcHHHHHHHHHhCCE
Confidence 7777888888775 34467 9999999999999999999854332 22 2 334577888887666666666 6799
Q ss_pred EEEeCCCCCCCCeEEEEecChhhHHHHHHHH
Q 014594 388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 418 (422)
Q Consensus 388 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al 418 (422)
.+.++..+..+..+||+.......+.+..++
T Consensus 324 ~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l 354 (383)
T COG0075 324 EIAGGQGPLKGKIFRIGHMGNVRPEDVLAAL 354 (383)
T ss_pred EecccccccCccEEEEecCccCCHHHHHHHH
Confidence 9988887777889999975432233344333
No 199
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.4e-22 Score=198.18 Aligned_cols=278 Identities=18% Similarity=0.142 Sum_probs=192.4
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-H---HHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-A---AVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~~~~v~~ 199 (422)
.+|+++...+|++++++++|.+. . ++++++++++..++.+++++||+|+++.|+|...... . ...|+++..++.
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~~~-~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGGAY-G-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCCCc-e-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 34677888999999999999753 3 4445668999999999999999999999999843322 2 225788777763
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|++++++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... .. ..+..+++
T Consensus 134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~----~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PL----ALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-ch----hhCCcEEE
Confidence 48999999997 689999999999999999999999999987 99999999998654321 11 12345999
Q ss_pred ccChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++.+| .+.||++++ +++.+.+...+.. ...++.....+...|+. +. +.++..++...+.+.|++++
T Consensus 203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t---l~~R~~~~~~na~~la~~L~~~p 279 (388)
T PRK07811 203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT---LAVRMDRHSENAEAVAEFLAGHP 279 (388)
T ss_pred ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999987654 567998875 6676766654433 23455554444444443 44 66777888999999999876
Q ss_pred CCc--ccCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------C-------
Q 014594 354 FLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------K------- 395 (422)
Q Consensus 354 ~~~--~~p~----------------~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------------~------- 395 (422)
.+. .+|. .|..+.+++.++ ..+.+|.+.|.--.+.+..|+. .
T Consensus 280 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~ 359 (388)
T PRK07811 280 EVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQL 359 (388)
T ss_pred CeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhc
Confidence 543 2332 245677888532 1234455554321222221211 0
Q ss_pred -CCCCeEEEEecChhhHHHHHHHH
Q 014594 396 -ELKGYVRVSVGKPEHTDALMECL 418 (422)
Q Consensus 396 -~~~~~iRis~~~~~~~~~l~~al 418 (422)
-.++.||||++.+.. ++|.+-+
T Consensus 360 gi~~~liR~svGlE~~-~dl~~dl 382 (388)
T PRK07811 360 EVPDDLVRLSVGIEDV-ADLLADL 382 (388)
T ss_pred CCCCCEEEEEeCCCCH-HHHHHHH
Confidence 014689999997653 4454443
No 200
>PRK05968 hypothetical protein; Provisional
Probab=99.91 E-value=1.2e-22 Score=198.71 Aligned_cols=272 Identities=19% Similarity=0.174 Sum_probs=200.8
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~ 200 (422)
+|+++...+|++++++++|.+ ..+++++++.++..++.+++++||+|+++.+.|.. +...+...|++++.++.
T Consensus 59 r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (389)
T PRK05968 59 RGDNPTVRAFEEMLAKLEGAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG- 135 (389)
T ss_pred CCCChhHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence 445666889999999999974 34455666789999998899999999999999974 33456668999998873
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|++++++.+ +++|+|++++|.||++.+.+.+++.++++. |+++|+|++|..+..... . ..+..+++.
T Consensus 136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~----~~g~Divv~ 204 (389)
T PRK05968 136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-I----TLGVDLVIH 204 (389)
T ss_pred ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-h----hcCCcEEEe
Confidence 2889999988 468999999999999999999999999987 999999999976543221 1 123458889
Q ss_pred cChhhhcccc-ccceeeecCHHHHHHHHHhcCC---CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~---~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|++|.++.+| .+.|++++++++++++.....+ ..++++.+..+...|+. +. +.++..++.+++.+.|++++.
T Consensus 205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---l~~r~~~~~~~a~~la~~L~~~p~ 281 (389)
T PRK05968 205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---LPLRMKAHEASALEIARRLKAHPV 281 (389)
T ss_pred eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999988654 5789999999988887754332 35666666666555543 34 667777789999999998876
Q ss_pred Cc-c-cC-----------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC----------------------C-CC
Q 014594 355 LN-P-YP-----------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK----------------------E-LK 398 (422)
Q Consensus 355 ~~-~-~p-----------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~----------------------~-~~ 398 (422)
+. + +| ..+..+.+++.++.+..+|.+.|...++.+.-|+.. + .+
T Consensus 282 v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~ 361 (389)
T PRK05968 282 VERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSP 361 (389)
T ss_pred ccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCC
Confidence 53 3 24 224467778764556778888887666666533321 1 15
Q ss_pred CeEEEEecChhhHHHH
Q 014594 399 GYVRVSVGKPEHTDAL 414 (422)
Q Consensus 399 ~~iRis~~~~~~~~~l 414 (422)
+.||+|++.+.. ++|
T Consensus 362 ~liR~SvGlE~~-~dl 376 (389)
T PRK05968 362 RSVRLHVGLEGT-EAL 376 (389)
T ss_pred CeEEEEeccCCH-HHH
Confidence 799999997543 444
No 201
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=1.6e-22 Score=197.62 Aligned_cols=308 Identities=21% Similarity=0.235 Sum_probs=224.1
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-C----CC--CCCC-Cc----chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHH
Q 014594 99 KIDANENPYGPPPEVREALGQL-K----FP--YIYP-DP----ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC 165 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~----~~--~~y~-~~----~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~ 165 (422)
.|+.+... +.|+.+++++.+. . .+ ..+. .. ...+.|+.+++++|.++ ++|++++|++.+++.++.+
T Consensus 2 Yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 2 YLDNAGTG-PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEBTSSS--B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred EeeCCCcc-CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 45444333 4567888888762 1 11 1111 11 14589999999999988 8999999999999999999
Q ss_pred h---cCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 166 V---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 166 l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
+ +++||+|++..-.|+... ..++..|+++..++.+.+..+|++++++.+. ++++++++++.+|.||...|.+
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPIE 159 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSHH
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-cccceEEeecccccccEEeeec
Confidence 8 789999999999997444 4455689999999876677899999999997 8999999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC------
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP------ 311 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~------ 311 (422)
++.++++. |+++++|.+++..... -.+...+.++++.|..|..|.+| +|+++++++.++++......
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~ 233 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDF 233 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred eehhhhhccCCceeEechhcccccc----ccccccccceeeecccccCCCCc--hhhheehhhhhhcccccccccccccc
Confidence 99999987 9999999999843321 11233455588999999444444 79999999999888422211
Q ss_pred -----------------CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-----CCCceEEE
Q 014594 312 -----------------YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-----PSYSNFIL 366 (422)
Q Consensus 312 -----------------~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-----p~~~~f~~ 366 (422)
.+.+.....++..+++.- ..++ ++++..+..+++.+.|++++.+.+. +..+..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 313 (371)
T PF00266_consen 234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVS 313 (371)
T ss_dssp HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEE
T ss_pred ccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEE
Confidence 145555555555555432 2234 7888999999999999998876652 22345666
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHH
Q 014594 367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALM 415 (422)
Q Consensus 367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~ 415 (422)
+.++ +.+.+++.+.|.++||.++.|.... ..+.||||+..-.+.++++
T Consensus 314 ~~~~-~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~ 369 (371)
T PF00266_consen 314 FNLP-GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD 369 (371)
T ss_dssp EEET-TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred Eeec-CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence 7775 7789999999998899999965432 3589999987433334443
No 202
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.2e-22 Score=186.08 Aligned_cols=285 Identities=16% Similarity=0.257 Sum_probs=212.3
Q ss_pred CCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhcC-CCCEEEEcCCCchhHHHHHHHcCCEEEE
Q 014594 125 IYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVK 196 (422)
Q Consensus 125 ~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 196 (422)
.|.+ .|.+-+|+.+|++. | .+|++|++|.|++.++..++..++. +.+.|+++-|.|+.|......+|+..+.
T Consensus 108 aYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~ 187 (475)
T KOG0258|consen 108 AYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVP 187 (475)
T ss_pred ccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccc
Confidence 4654 47889999999997 3 4788999999999999999998754 6688999999999999888888887766
Q ss_pred ec--CCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-h
Q 014594 197 VP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R 265 (422)
Q Consensus 197 v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-~ 265 (422)
+- .+.+|.+|.++|++.+.+ -+++++++.||.||||.+.+.+-+++|.++ +++++.||+|.+-.+... .
T Consensus 188 YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~sk 267 (475)
T KOG0258|consen 188 YYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSK 267 (475)
T ss_pred eeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcc
Confidence 54 567899999999988754 468999999999999999999999999875 999999999998765431 1
Q ss_pred hhh-------hh-cCC---cEEEEccChhhh-ccccccceeeec---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC
Q 014594 266 MEW-------VK-KHD---NLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP 329 (422)
Q Consensus 266 ~~~-------~~-~~~---~~i~~~S~SK~~-~~~G~r~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~ 329 (422)
... .. .+. .++.++|.||.+ |=.|.|.||+=. +++..+.+.+.... ...+..+|...-..+.-+
T Consensus 268 FhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP 347 (475)
T KOG0258|consen 268 FHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPP 347 (475)
T ss_pred hHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCC
Confidence 111 11 122 246678889985 447899999765 66777766655443 445555666555555421
Q ss_pred --------hH---HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEE--eCC---------CCCHHHH-HHHHH-
Q 014594 330 --------IY---LE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCE--VTS---------GMDAKKL-KDDLA- 383 (422)
Q Consensus 330 --------~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~--~~~---------~~~~~~~-~~~L~- 383 (422)
.+ .+ +.+.++++.+.+.+.++.+.++.. .+.+++|++-+ +|. +...+.| +..|+
T Consensus 348 ~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe 427 (475)
T KOG0258|consen 348 KPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLE 427 (475)
T ss_pred CCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 11 12 667788889999999999988875 45677888854 442 3344455 34455
Q ss_pred hCCcEEEeCCCCCC---CCeEEEEecChh
Q 014594 384 KMGVMIRHYNNKEL---KGYVRVSVGKPE 409 (422)
Q Consensus 384 ~~gI~v~~~~~~~~---~~~iRis~~~~~ 409 (422)
..||.+.||+.++. .=++|.++-.+.
T Consensus 428 ~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 428 ATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred hcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 78999999998543 238999986554
No 203
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=3.3e-22 Score=195.60 Aligned_cols=277 Identities=15% Similarity=0.207 Sum_probs=194.7
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-H---HHHHHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~g~~~~~v~~~~~ 202 (422)
.++...+|++++++++|.+ +.+++++| +.++..++. ++++||+|+++.|.|+. + ...++..|++++.++.
T Consensus 52 ~~p~~~~le~~lA~l~g~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~--- 125 (390)
T PRK08064 52 GNPTREALEDIIAELEGGT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM--- 125 (390)
T ss_pred CChhHHHHHHHHHHHhCCC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC---
Confidence 4556789999999999975 45665555 668888886 78999999999998863 2 3445668999999985
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
.|++.+++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .. ..+.++++.|+
T Consensus 126 --~d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~ 197 (390)
T PRK08064 126 --TNLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSA 197 (390)
T ss_pred --CCHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeec
Confidence 27899999997 689999999999999999999999999987 99999999998654221 11 23456899999
Q ss_pred hhhhcc-ccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--
Q 014594 282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-- 356 (422)
Q Consensus 282 SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-- 356 (422)
+|.++. +|...|++++ ++++++.+...+.+++.....+.+.. ++..-+.+. +.++..++...+.+.|++++.+.
T Consensus 198 tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v 276 (390)
T PRK08064 198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNV 276 (390)
T ss_pred ceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence 998753 3345676666 56888988888777665443333333 333334455 77888899999999998875432
Q ss_pred ccC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCc---EEEeCC------------C----------C
Q 014594 357 PYP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGV---MIRHYN------------N----------K 395 (422)
Q Consensus 357 ~~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI---~v~~~~------------~----------~ 395 (422)
.+| ..|..+.+++. +.+++.+.+...++ .++.|+ . .
T Consensus 277 ~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~---~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~ 353 (390)
T PRK08064 277 YYPGLQTHLGFDIQQSQATSAGAVLSFTLQ---SEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER 353 (390)
T ss_pred ECCCCCCCccHHHHHHhCCCcceEEEEEEC---CHHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence 112 23456777774 23444444445565 333331 0 0
Q ss_pred CC-CCeEEEEecCh---hhHHHHHHHHhhh
Q 014594 396 EL-KGYVRVSVGKP---EHTDALMECLMHL 421 (422)
Q Consensus 396 ~~-~~~iRis~~~~---~~~~~l~~al~~l 421 (422)
+. ++.+|+|++-+ +.+++|.+||+.+
T Consensus 354 gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 354 GITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 11 57899999853 3455666666543
No 204
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=1.1e-21 Score=191.73 Aligned_cols=311 Identities=18% Similarity=0.131 Sum_probs=215.3
Q ss_pred CCCCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCC-------CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYI-------YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~-------y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++++|++|+ -.+..+|+++++..+. .++.+ ++.. -..+|+++||+++|. +..++.+++..+.-.
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--e~all~sSGy~AN~~ 177 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--EDCLVCPTGFAANMA 177 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--CcEEEECChHHHHHH
Confidence 346789998874 4567788888776552 22211 1111 246899999999995 345555555556656
Q ss_pred HHHHh--------------cCCCCEEEEcCCCchhHHHHHHHc----CCEEEEecCCCCCCCCHHHHHHHhhc--CCCeE
Q 014594 162 IMRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKC 221 (422)
Q Consensus 162 ~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~ 221 (422)
++.++ .+++|.|+...-.|......++.. +++++.++ +.|++.|++.+++ .+.++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~-----HND~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR-----HCDMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC-----CCCHHHHHHHHHhCCCCceE
Confidence 66655 245677888888998888887776 57777776 4588999988853 23456
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeee
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGA 296 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~ 296 (422)
|++....+++|.+.+.+++.+|++. |+++|+||+|..+..+.. .....+ ..+.+++++||||++|..| ||++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~ 329 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIA 329 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceee
Confidence 6666889999999999999999987 999999999998764432 222222 2467799999999987666 9999
Q ss_pred cCHHHHHHHHHhcCCC----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594 297 FPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 297 ~~~~~~~~l~~~~~~~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 371 (422)
++.++++.+......+ ..++....++.++++...... .+++++++.+++.+. .++ . ..+..+.+.+.+
T Consensus 330 gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~---~G~-~---~~sPI~pI~ig~ 402 (476)
T PLN02955 330 CSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL---SGV-D---ISSPIISLVVGN 402 (476)
T ss_pred cHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh---cCC-C---CCCCEEEEEeCC
Confidence 9999999888766653 233444445555553321112 667777887777774 232 1 236677777765
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
...+.++.+.|+++||.+.+..+ +.....+||+++. .++++++.++|..
T Consensus 403 ~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 403 QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 55667789999999999997666 3445689999973 5556666666654
No 205
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=6.1e-22 Score=193.14 Aligned_cols=215 Identities=19% Similarity=0.185 Sum_probs=164.3
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKS 201 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~ 201 (422)
+|+++...+|++++++++|. +++++++|+++|+..++.+++++||+|+++.|.|..+...+ ...|+++..+.
T Consensus 49 r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~--- 123 (385)
T PRK08574 49 REENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY--- 123 (385)
T ss_pred CCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence 45677889999999999995 47888899999999999999999999999999998766554 34677777653
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
.|++++++++++.++|+|++++|+||||.+++.+++.++++. |+++|+|++|...... ... ..+.++++.|
T Consensus 124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~S 195 (385)
T PRK08574 124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVHS 195 (385)
T ss_pred ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEee
Confidence 468999999973389999999999999999999999999987 9999999999643211 111 2345699999
Q ss_pred Chhhhcccccc-ceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 281 FSKRAGLAGLR-VGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 281 ~SK~~~~~G~r-~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
++|.++.+|-. .|++++ ++++.++++..+.. ..++++....+...|+ .+. +.++..++...+.+.|++++.+
T Consensus 196 ~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---tL~~R~~~~~~na~~la~~L~~~p~v 272 (385)
T PRK08574 196 LTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---TLEVRFERQCRNAMAIAEFLSEHPKV 272 (385)
T ss_pred CceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99998766654 474554 77888877655443 3455555444444443 344 6677778889999999887644
No 206
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=5.4e-22 Score=195.85 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=137.5
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (422)
.+|+++...+|++++++++|. +..++++++++++..++.+++++||+|+++.+.|+. +...++..|++++.++.
T Consensus 52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 456777789999999999995 468889999999999999899999999999999864 33445678999999984
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
+ |++++++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... . .. ..+.++++
T Consensus 130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~---~l-~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-R---PI-DHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-C---ch-hcCCeEEE
Confidence 2 8999999997 689999999999999999999999999987 9999999999743211 1 11 24568999
Q ss_pred ccChhhhccccccceeeecCH
Q 014594 279 RTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~~~ 299 (422)
.|+||.++.+|+|+||+++++
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ECccccccCCccceEEEEEec
Confidence 999999998999999999854
No 207
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=2.7e-21 Score=187.57 Aligned_cols=251 Identities=19% Similarity=0.198 Sum_probs=184.2
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DF 203 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~ 203 (422)
+..+...++++++++++|. +++++++|+++++..++.++ +++||+|+++.++|..+...+...|++++.++.+. ++
T Consensus 15 ~~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 15 TLGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTY 92 (352)
T ss_pred cCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcC
Confidence 3455688999999999995 47888899999999999988 68999999999999998888888999999999765 68
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccC-CCchhhhhhcCCcEEEEccC
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~~~S~ 281 (422)
.+|++.+++.++ +++++|+++| ++|...+.+++.++++. |+++|+|++|..... .+.... .. ..+.+.||
T Consensus 93 ~~d~~~l~~~i~-~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~---~~-~d~~~~S~ 164 (352)
T cd00616 93 NIDPELIEAAIT-PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVG---TF-GDAGAFSF 164 (352)
T ss_pred CcCHHHHHHhcC-cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcc---cC-cceeEEcC
Confidence 899999999996 7899999764 69999999999999987 999999999985431 111111 11 13566676
Q ss_pred h--hhhccccccceeeecC-HHHHHHHHHhcCC-----------------CCCcHHHHHHHHHHccCChHHH-HHHHHHH
Q 014594 282 S--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------YNVSVAAEVAACAALQNPIYLE-VKEALIK 340 (422)
Q Consensus 282 S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----------------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~ 340 (422)
+ |.+ ++.+.|+++.+ +++.+.+...... +.++.+....+...+ +.++ ..++.++
T Consensus 165 ~~~K~~--~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~ 239 (352)
T cd00616 165 HPTKNL--TTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQL---EKLDEIIARRRE 239 (352)
T ss_pred CCCCCC--cccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHH---HhhHHHHHHHHH
Confidence 6 866 34456888775 5777766543211 112333333333222 2234 6677788
Q ss_pred HHHHHHHHHccCCCCcccC-CC-----ceEEEEEeCC--CCCHHHHHHHHHhCCcEEEe
Q 014594 341 ERERLFKLLKDVPFLNPYP-SY-----SNFILCEVTS--GMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 341 ~~~~l~~~L~~~~~~~~~p-~~-----~~f~~~~~~~--~~~~~~~~~~L~~~gI~v~~ 391 (422)
+.+++.+.|++++.+.+.. .. ...+.+.+++ +.+.+++.+.|.++||.+..
T Consensus 240 ~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~ 298 (352)
T cd00616 240 IAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV 298 (352)
T ss_pred HHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence 9999999999876555432 11 1344566664 57899999999999998763
No 208
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.90 E-value=7.6e-22 Score=195.72 Aligned_cols=326 Identities=12% Similarity=0.082 Sum_probs=207.1
Q ss_pred CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCC-CCC-CC---CcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LKF-PYI-YP---DPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~-~~~-y~---~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~ 160 (422)
..+++.++|+..+.... ..+|++.+++.+ +.. .+. ++ .+...++-+.+++..+.+. ++++++++++++++
T Consensus 37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e 116 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE 116 (425)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 34677899998874333 247888877765 221 111 12 2234466666666665433 47888888888888
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEE--------------E--ecCCCCCCCC----HHHHHHHhh---
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVV--------------K--VPRKSDFSLN----VELIADAVE--- 215 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--v~~~~~~~~d----~~~l~~~i~--- 215 (422)
.+++... .....|+...++|++....+...+.... . +|.+.+ +.+ ++.+++.+.
T Consensus 117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~ 195 (425)
T PRK08088 117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA 195 (425)
T ss_pred HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence 8877432 2235677779999876655544332211 1 121111 122 556888775
Q ss_pred -cCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc
Q 014594 216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 216 -~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 289 (422)
..+..+|++. ..+++.+...+.+.+++|.+. ++++|+||+|.++...+... .+...+.+..+.||||.++ +|
T Consensus 196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G 273 (425)
T PRK08088 196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG 273 (425)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence 2467788877 445666566677766666553 99999999999876544322 2222333455789999998 99
Q ss_pred ccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce
Q 014594 290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN 363 (422)
Q Consensus 290 ~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~ 363 (422)
+|+||+++++++++.+..... .++.+++.+.++.++|+.. +.++ +++..++.++.+.+.+.+.+.+......|.
T Consensus 274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~ 353 (425)
T PRK08088 274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGA 353 (425)
T ss_pred CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccce
Confidence 999999999999988765433 3678999999999998753 3444 444444444555544455554332334489
Q ss_pred EEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++|+.+.++ .....+.+.+.++||.+.++... .+.+|++++...+.+++.++++++
T Consensus 354 ~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l 417 (425)
T PRK08088 354 MIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEII 417 (425)
T ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence 999998422 23677888888999998865432 488999998433235566666554
No 209
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=191.33 Aligned_cols=268 Identities=20% Similarity=0.241 Sum_probs=189.4
Q ss_pred HHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH
Q 014594 111 PEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA 188 (422)
Q Consensus 111 ~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~ 188 (422)
++..+++.+ +..+..++++...+|++++++++|.+ +++.++|+++++.+++.++ +++||+|+++.|+|..+...+.
T Consensus 14 ~~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~ 91 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV 91 (379)
T ss_pred HHHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH
Confidence 333555554 33334456667899999999999974 6888999999999999998 8999999999999999888888
Q ss_pred HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCch
Q 014594 189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR 265 (422)
Q Consensus 189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~ 265 (422)
..|++++.++.+ +++.+|++.+++.++ +++|+|+ |+|++|...+.+++.++++. |+++|+|++|.... +.+..
T Consensus 92 ~~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~ 167 (379)
T PRK11658 92 LLGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRH 167 (379)
T ss_pred HcCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCee
Confidence 899999999965 456799999999997 6899988 66779999999999999987 99999999998533 22222
Q ss_pred hhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC------------------------CCCcHHHHH
Q 014594 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------------YNVSVAAEV 320 (422)
Q Consensus 266 ~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------------~~~~~~~~~ 320 (422)
. ...+. .+.||++...+++.+.|+++.+ +++.++++..... ++.......
T Consensus 168 ~---g~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~ 242 (379)
T PRK11658 168 I---GARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADIN 242 (379)
T ss_pred c---CCCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHH
Confidence 2 22222 4556665444566788988874 7888777643211 011111122
Q ss_pred HHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCC----ceEE-EEEeCC---CCCHHHHHHHHHhCCcEEE
Q 014594 321 AACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSY----SNFI-LCEVTS---GMDAKKLKDDLAKMGVMIR 390 (422)
Q Consensus 321 aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~f~-~~~~~~---~~~~~~~~~~L~~~gI~v~ 390 (422)
|+....+. +.++ ..++.+++.+++.+.|+++++..+ .|.. ..++ .+.++. +.+.+++.+.|.++||.++
T Consensus 243 AAl~~~ql-~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~ 321 (379)
T PRK11658 243 AAIALVQL-AKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTG 321 (379)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCc
Confidence 23222222 2344 667777778888888888764432 2221 2233 244442 4578999999999999876
No 210
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.2e-21 Score=188.46 Aligned_cols=234 Identities=16% Similarity=0.082 Sum_probs=176.0
Q ss_pred CCCCCHHHHHHHhcC-CCCCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594 106 PYGPPPEVREALGQL-KFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (422)
Q Consensus 106 ~~~~~~~v~~al~~~-~~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (422)
.++.++++.++..+. ...+.|. ++....||++++++.+. +++++++|+++|+..++.+++++||+|++++|.|.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~ 111 (394)
T PRK09028 34 VFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYE 111 (394)
T ss_pred ccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcH
Confidence 455556666555432 1224453 34567999999999864 57999999999999999999999999999999997
Q ss_pred hHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594 182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay 256 (422)
.+... ....|+++..++.. |.+.+++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|
T Consensus 112 ~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~ 185 (394)
T PRK09028 112 PTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTW 185 (394)
T ss_pred HHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCc
Confidence 66543 34578888877632 4678998886 789999999999999999999999999987 9999999999
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhccc-cccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~ 333 (422)
.....- .+ ...+.++++.|.+|.++.. ++..|+++.++++.+.+...... ..+++.....+...|+ -+.
T Consensus 186 a~p~~~-~P----l~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~---TL~ 257 (394)
T PRK09028 186 ASPINS-RP----FEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLR---TLG 257 (394)
T ss_pred cccccC-Cc----cccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHH
Confidence 843211 11 1456679999999987433 46678888888877777644332 3456666555544443 356
Q ss_pred -HHHHHHHHHHHHHHHHccCCCC
Q 014594 334 -VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 334 -~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
+.++..++...+.+.|++.+.+
T Consensus 258 lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 258 VRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Confidence 8888999999999999998755
No 211
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=6.2e-22 Score=191.51 Aligned_cols=279 Identities=17% Similarity=0.170 Sum_probs=194.2
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-EEEecCCCC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD 202 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~ 202 (422)
.+|+++...+|+++++++.+ .+++++++|+++|+.+++. ++++||+|+++.+.|............. -+.+ .
T Consensus 49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~ 121 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T 121 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence 56788889999999999998 4699999999999999995 6799999999999996443332221000 0111 2
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
+..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... ... ..+..+++.|+
T Consensus 122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~ 195 (364)
T PRK07269 122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA 195 (364)
T ss_pred ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence 3468999999997 789999999999999999999999999987 9999999997532211 122 23445999999
Q ss_pred hhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594 282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356 (422)
Q Consensus 282 SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~ 356 (422)
+|.++..| .=.|++++ ++++.++++..+.. ..++++....+...|+. ++ +.++.+++...+.+.|++.+.+.
T Consensus 196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t---L~~r~~~~~~na~~~a~~L~~~p~v~ 272 (364)
T PRK07269 196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT---LSLRMERSTANAQEVVAFLKKSPAVK 272 (364)
T ss_pred ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99886433 23578787 56777777654432 35677777766666654 55 77888999999999999887553
Q ss_pred --ccCCCceEEEEEeCCCCCHHHHHHHHHhC----------CcEEEeCCC-------------CCCCCeEEEEecChhhH
Q 014594 357 --PYPSYSNFILCEVTSGMDAKKLKDDLAKM----------GVMIRHYNN-------------KELKGYVRVSVGKPEHT 411 (422)
Q Consensus 357 --~~p~~~~f~~~~~~~~~~~~~~~~~L~~~----------gI~v~~~~~-------------~~~~~~iRis~~~~~~~ 411 (422)
.+|..|..+.+.+........|.+.|.-. .+.+.|... .-.++.||+|++.+. .
T Consensus 273 ~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~-~ 351 (364)
T PRK07269 273 EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIED-A 351 (364)
T ss_pred EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-H
Confidence 45777777777774212233444444311 122222211 012468999999765 3
Q ss_pred HHHHHHHh
Q 014594 412 DALMECLM 419 (422)
Q Consensus 412 ~~l~~al~ 419 (422)
++|.+-|+
T Consensus 352 ~dli~dl~ 359 (364)
T PRK07269 352 RDLIADLK 359 (364)
T ss_pred HHHHHHHH
Confidence 55544443
No 212
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=2.3e-21 Score=188.95 Aligned_cols=272 Identities=19% Similarity=0.214 Sum_probs=195.1
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~ 202 (422)
+++...+|++.+++++|. ++++++++++.++..++. ++++||+|+++.+.|..+.. .+...|++++.++.
T Consensus 45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~--- 118 (378)
T TIGR01329 45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT--- 118 (378)
T ss_pred CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC---
Confidence 345578999999999996 567777777889998887 78999999999999986543 34568999999985
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
.|+++++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|..... .... ..+.++++.|+
T Consensus 119 --~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l----~~g~Di~v~S~ 190 (378)
T TIGR01329 119 --TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPL----ELGADIVYHSA 190 (378)
T ss_pred --CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChh----hcCCcEEEEec
Confidence 37999999997 789999999999999999999999999987 999999999853221 1111 12345999999
Q ss_pred hhhhcc-ccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594 282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356 (422)
Q Consensus 282 SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~ 356 (422)
+|.++. .+++.|++++ ++++.+++...... ...++.....+ +...+.+. +.++..++...+.+.|++++.+.
T Consensus 191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~---~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL---LRGIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred ceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 997753 3477899988 45566767655442 34455544322 33334445 77888888888888988765432
Q ss_pred --ccC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594 357 --PYP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNK---------------------- 395 (422)
Q Consensus 357 --~~p----------------~~~~f~~~~~~~~~~-~~~~~~~L~~~gI~v~~~~~~---------------------- 395 (422)
.+| ..+..+.+++ ++.+ +.+|.+.|...+|.++.|+..
T Consensus 268 ~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~ 346 (378)
T TIGR01329 268 KVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREER 346 (378)
T ss_pred EEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhc
Confidence 121 1235667777 3444 678889997777777755430
Q ss_pred -CCCCeEEEEecChhhHHHHHHH
Q 014594 396 -ELKGYVRVSVGKPEHTDALMEC 417 (422)
Q Consensus 396 -~~~~~iRis~~~~~~~~~l~~a 417 (422)
-.++.||+|++.+. .|+|.+-
T Consensus 347 gi~~~liR~svGlE~-~~dl~~d 368 (378)
T TIGR01329 347 GLPEDLVRLSVGIED-VDDLISD 368 (378)
T ss_pred CCCCCeEEEEeccCC-HHHHHHH
Confidence 01468999999754 3444433
No 213
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=1.9e-21 Score=189.19 Aligned_cols=267 Identities=17% Similarity=0.193 Sum_probs=185.2
Q ss_pred HHHHHHHhc-CCCCCCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594 111 PEVREALGQ-LKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (422)
Q Consensus 111 ~~v~~al~~-~~~~~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (422)
++..+++.+ +..+..+. .+-..++++.++++++. +++++++|+++++.+++.++ ++|||+|+++.++|..+...+
T Consensus 11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~ 88 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF 88 (376)
T ss_pred HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 444566665 33333333 23367889999999875 58999999999999999887 899999999999999988888
Q ss_pred HHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594 188 AVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (422)
Q Consensus 188 ~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~ 264 (422)
...|++++.++.+. ++.+|+++++++++ +++|+|+ |+||+|...+.+++.++++. |++||+|++|+.+. +++.
T Consensus 89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~ 164 (376)
T TIGR02379 89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR 164 (376)
T ss_pred HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence 88999999999764 47899999999997 6899987 77789999999999999997 99999999998764 3332
Q ss_pred hhhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC-----------------------CCCcHHH
Q 014594 265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------------YNVSVAA 318 (422)
Q Consensus 265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----------------------~~~~~~~ 318 (422)
....+. .+.+.|| +|.+. +|.+.|+++++ +++.+++...+.. +.++.+.
T Consensus 165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 239 (376)
T TIGR02379 165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQ 239 (376)
T ss_pred ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHH
Confidence 222211 1334444 37775 67789998875 7888877754321 1122233
Q ss_pred HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC---CCcc--cCCCc----eEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594 319 EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP---FLNP--YPSYS----NFILCEVTSGMDAKKLKDDLAKMGVM 388 (422)
Q Consensus 319 ~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~~----~f~~~~~~~~~~~~~~~~~L~~~gI~ 388 (422)
.+.+...| +.++ ..++.++..++..+.|.++. .... .+.+. .++++.+++..+.+++.+.|.++||.
T Consensus 240 Aa~g~~qL---~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~ 316 (376)
T TIGR02379 240 AAYLWAQL---EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIM 316 (376)
T ss_pred HHHHHHHH---HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCC
Confidence 22232333 2333 44444555555666665542 1111 12221 12356776545789999999999999
Q ss_pred EEe
Q 014594 389 IRH 391 (422)
Q Consensus 389 v~~ 391 (422)
++.
T Consensus 317 ~~~ 319 (376)
T TIGR02379 317 AVF 319 (376)
T ss_pred ccc
Confidence 874
No 214
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=3.7e-21 Score=187.86 Aligned_cols=264 Identities=17% Similarity=0.179 Sum_probs=188.1
Q ss_pred HHHHhc-CCCCCCCCCcc-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHc
Q 014594 114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN 190 (422)
Q Consensus 114 ~~al~~-~~~~~~y~~~~-~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~ 190 (422)
.+++.+ +..+..|+... ..++++.+++++|. +++++++|+++++.+++..+ +++||+|+++.|+|..+...+...
T Consensus 14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~ 91 (375)
T PRK11706 14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR 91 (375)
T ss_pred HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence 445544 33334555443 46788889999886 58999999999999987765 789999999999999999999999
Q ss_pred CCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhh
Q 014594 191 GAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME 267 (422)
Q Consensus 191 g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~ 267 (422)
|++++.++.++ ++.+|++++++.++ +++|+|+++| ++|...+.+++.++++. |++||+|++|+.+. +++....
T Consensus 92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g 167 (375)
T PRK11706 92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG 167 (375)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence 99999999654 46899999999997 6899999764 69999999999999987 99999999998775 3332222
Q ss_pred hhhcCCcEEEEccCh--hhhccccccceeeecCHHHHHHHHHhcCC-------------------CCCc----HHHHHHH
Q 014594 268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVS----VAAEVAA 322 (422)
Q Consensus 268 ~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~~~~~~~l~~~~~~-------------------~~~~----~~~~~aa 322 (422)
.. . .+.+.||+ |.++ +|.+.++++.++++.+++...+.. ++.+ .+..+.+
T Consensus 168 ~~---~-~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~ 242 (375)
T PRK11706 168 TI---G-HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL 242 (375)
T ss_pred cC---c-CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH
Confidence 21 1 24445554 9886 588888888888888876654421 1122 1222222
Q ss_pred HHHccCChHHH-HHHHHHHHHHHHHHHHccCC---CCcc--cCCC----ceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 323 CAALQNPIYLE-VKEALIKERERLFKLLKDVP---FLNP--YPSY----SNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~----~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
...| +.++ ..++.+++.+++.+.|.+++ .+.. .+.+ ..++++.++++.+.+++.+.|.++||.++.
T Consensus 243 ~~ql---~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~ 318 (375)
T PRK11706 243 WAQL---EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVF 318 (375)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccc
Confidence 2223 2234 55566667777777777764 2321 1222 224567776566889999999999999764
No 215
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.7e-21 Score=190.78 Aligned_cols=214 Identities=17% Similarity=0.157 Sum_probs=161.6
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~ 201 (422)
++++....|+++++++.|. +..++++|+++++..++..++++||+|+++.+.|+. +...++..|++++.++.
T Consensus 61 ~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-- 136 (431)
T PRK08248 61 IMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-- 136 (431)
T ss_pred CCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC--
Confidence 3566678999999999994 578889999999999999899999999999998853 33456678999999984
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
.|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|.... ....+ ..+.++++.|
T Consensus 137 ---~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~----~~~pl-~~gaDivv~S 207 (431)
T PRK08248 137 ---SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY----LLRPI-EHGADIVVHS 207 (431)
T ss_pred ---CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc----cCChh-HcCCCEEEEc
Confidence 38999999997 689999999999999999999999999987 99999999986211 11111 3567799999
Q ss_pred ChhhhccccccceeeecC-HHHH-----------------------H----------HHHHh--cCCCCCcHHHHHHHHH
Q 014594 281 FSKRAGLAGLRVGYGAFP-LSII-----------------------E----------YLWRA--KQPYNVSVAAEVAACA 324 (422)
Q Consensus 281 ~SK~~~~~G~r~G~i~~~-~~~~-----------------------~----------~l~~~--~~~~~~~~~~~~aa~~ 324 (422)
++|.+|.+|.++|++++. .+.. + ..... .....+++.....+..
T Consensus 208 ~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r 287 (431)
T PRK08248 208 ATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ 287 (431)
T ss_pred CccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence 999999999999987763 2110 0 00000 1113344444333333
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
.-+-+. +.++..++...+.+.|++++.+
T Consensus 288 ---gl~tl~~R~~~~~~nA~~la~~L~~~p~v 316 (431)
T PRK08248 288 ---GLETLHLRMERHSENALAVAKFLEEHEAV 316 (431)
T ss_pred ---CcCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 223445 7788889999999999988754
No 216
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.90 E-value=4e-21 Score=189.53 Aligned_cols=318 Identities=15% Similarity=0.181 Sum_probs=214.2
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+++.++|+..+. +.+ ..+|++.+|+.+ +.. +..|..+...+|.++|+++.+ .+.+++++++++|++.+
T Consensus 35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A 112 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA 112 (406)
T ss_pred eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence 34577899997752 233 247888888876 321 122333345678899998875 36999999999999999
Q ss_pred HHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEE-E---ecCC----CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRK----SDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
++... ....+|+...++|++....+...+.... . .+.. .....|++.+++.+. +++++|++ .
T Consensus 113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E 190 (406)
T PRK12381 113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E 190 (406)
T ss_pred HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence 99541 1346799999999866544433222110 0 0000 011347899999986 57888887 5
Q ss_pred CCCccCcCC--CHHHHHHHHc---C-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 227 PNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 227 p~NPtG~~~--~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
|.|++|-++ +.+.+++|.+ . |+++|+||+|.+|...+.... .....++ +.||||.++ +|+|+||++++
T Consensus 191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD---i~t~sK~l~-gG~~ig~~~~~ 266 (406)
T PRK12381 191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---VLTTAKALG-GGFPIGAMLTT 266 (406)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC---EEEehhhhh-CCCceEEEEEc
Confidence 889998765 5666666554 3 999999999988765443221 1111222 358999998 89999999999
Q ss_pred HHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCC
Q 014594 299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 299 ~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~ 371 (422)
+++++.+.... ..|+.+++.+.++.++|+.-+ .. .+++++++.+++.+.|+++. .+...+..|.++++++++
T Consensus 267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~ 345 (406)
T PRK12381 267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNA 345 (406)
T ss_pred HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecC
Confidence 99998876533 236779999999888775421 12 77788888888888887753 122234567888998864
Q ss_pred CC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 GM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.. ....+.+.|+++||.+.+.. ++.+||+++...+.++++++++++
T Consensus 346 ~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l 393 (406)
T PRK12381 346 EYAGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRF 393 (406)
T ss_pred chhhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 32 45778888999999998653 479999986422234455555443
No 217
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=3.9e-21 Score=186.65 Aligned_cols=274 Identities=14% Similarity=0.083 Sum_probs=196.1
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (422)
+.+|....|+++++++.|. +++++++|+++|+..++.+++++||+|++++|.|+..... .+..|+++..++..
T Consensus 47 ~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 47 RGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred CCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 3456678999999999985 5899999999999999999999999999999999765543 34578888777532
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
+.+.+++.++ +++|+|++++|+||+|...+.+++.++++. |+++|+|++|....... ....+.++++.|
T Consensus 124 ----~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-----pl~~gaDivv~S 193 (377)
T TIGR01324 124 ----IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-----PLEHGVDISIQA 193 (377)
T ss_pred ----CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-----ccccCceEEEec
Confidence 2378888887 789999999999999999999999999987 99999999998533211 113466799999
Q ss_pred Chhhhccc-cccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594 281 FSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356 (422)
Q Consensus 281 ~SK~~~~~-G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~ 356 (422)
++|.++.. +...|+++++++.++.+...... ..+++.....+...+ +.+. +.++..++...+.+.|++.+.+.
T Consensus 194 ~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl---~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (377)
T TIGR01324 194 GTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGL---RTLGVRLKQHQESSLAIAKWLSEQPEVA 270 (377)
T ss_pred CceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 99988633 36789999998888777644333 345665544444444 3445 77788888888999998876442
Q ss_pred -c-cC----------------CCceEEEEEeCC-C-CCHHHHHHHHHhCCcEEEeCCCC-------------------CC
Q 014594 357 -P-YP----------------SYSNFILCEVTS-G-MDAKKLKDDLAKMGVMIRHYNNK-------------------EL 397 (422)
Q Consensus 357 -~-~p----------------~~~~f~~~~~~~-~-~~~~~~~~~L~~~gI~v~~~~~~-------------------~~ 397 (422)
+ +| ..+..+.+++.+ + ....+|.+.|.-.++.+.-|+.. ..
T Consensus 271 ~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~ 350 (377)
T TIGR01324 271 RVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLE 350 (377)
T ss_pred EEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCC
Confidence 1 23 124456677752 1 23456667776445554333220 12
Q ss_pred CCeEEEEecChhhHHHHHH
Q 014594 398 KGYVRVSVGKPEHTDALME 416 (422)
Q Consensus 398 ~~~iRis~~~~~~~~~l~~ 416 (422)
++.||+|++.++ .|+|.+
T Consensus 351 ~~liR~svGlE~-~~dl~~ 368 (377)
T TIGR01324 351 GPLIRVHIGLEN-VDDLKA 368 (377)
T ss_pred CCEEEEEeCCCC-HHHHHH
Confidence 368999999754 344433
No 218
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.2e-20 Score=184.95 Aligned_cols=213 Identities=15% Similarity=0.133 Sum_probs=163.9
Q ss_pred CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCC
Q 014594 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~ 203 (422)
++....|++.++++.|. +..+.+++++.|+.+++.+++++||+|+++.++|...... ....|+++..++.
T Consensus 60 nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~---- 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP---- 133 (432)
T ss_pred CcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC----
Confidence 56678999999999985 4688899999999999999999999999999999754443 5678999999853
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S 282 (422)
.+|+++++++++ ++||+|++++|+||++.+.+.+++.++++. |+++|+|++|.. + .....-..+-.|++.|+|
T Consensus 134 ~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P-~~~~pl~~GADIvv~S~T 207 (432)
T PRK06702 134 NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----P-YLCQAFEHGANIIVHSTT 207 (432)
T ss_pred CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----h-hhCChhhcCCCEEEEccc
Confidence 578999999997 799999999999999999999999999987 999999999851 1 111111345569999999
Q ss_pred h-----hhccccccc-----eeeecC-HHHH---------------------HHHH--Hh-cCCCCCcHHHHHHHHHHcc
Q 014594 283 K-----RAGLAGLRV-----GYGAFP-LSII---------------------EYLW--RA-KQPYNVSVAAEVAACAALQ 327 (422)
Q Consensus 283 K-----~~~~~G~r~-----G~i~~~-~~~~---------------------~~l~--~~-~~~~~~~~~~~~aa~~~L~ 327 (422)
| ..+++|.++ +|...+ .+++ .+.. .. .....++++....+...|+
T Consensus 208 Ky~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~ 287 (432)
T PRK06702 208 KYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE 287 (432)
T ss_pred cccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC
Confidence 9 777777776 454432 1111 1111 11 1224678888777777775
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
. ++ +.++..++...+.+.|++++.+
T Consensus 288 T---l~lR~~r~~~Na~~la~~L~~~p~V 313 (432)
T PRK06702 288 T---LHLRMERHSENALAVAKWLADHERI 313 (432)
T ss_pred c---HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4 44 6677789999999999987644
No 219
>PLN00144 acetylornithine transaminase
Probab=99.89 E-value=7.9e-21 Score=185.53 Aligned_cols=315 Identities=15% Similarity=0.130 Sum_probs=209.7
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+++.++|+..+.. .+ ..+|++.+++.+ +... ..|......+|.+.|++..+ .+.+++++++++|++.+
T Consensus 11 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~A 88 (382)
T PLN00144 11 DVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAA 88 (382)
T ss_pred eCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHH
Confidence 346778999987742 33 357888888876 3211 11233334567777776654 46999999999999999
Q ss_pred HHHhc---C------C------CCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHh
Q 014594 163 MRCVL---D------P------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 163 ~~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i 214 (422)
++... . + ..+|+....+|++....+...... +..+| ..|++.+++.+
T Consensus 89 lklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~ 163 (382)
T PLN00144 89 IKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE-----YGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC-----CCCHHHHHHhc
Confidence 98432 1 0 246899999998665444332211 11121 12789999988
Q ss_pred hcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcc
Q 014594 215 EREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 215 ~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~ 287 (422)
...++++|+++..+||.|...+ .+++.++|+. |+++|+||+|..|...+.... .....+. +.||||.++
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~- 239 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA- 239 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-
Confidence 6567889998866899444332 3455555665 999999999998865443222 1222222 668899997
Q ss_pred ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHH---ccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594 288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAA---LQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY 361 (422)
Q Consensus 288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~---L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 361 (422)
+|+|+||+++++++.+.+.. ....|+.+++.+.++.+. ++++++.+ .++.-+..++.+.+.+.+.+.+......
T Consensus 240 ~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~ 319 (382)
T PLN00144 240 GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV 319 (382)
T ss_pred CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecC
Confidence 89999999999999988753 233577899999888844 45555544 3333334455555566666544333458
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.++|+++. .+...+.+.+.++||.+.++.. .+.+|++++...+.+++.+++++|
T Consensus 320 G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l 374 (382)
T PLN00144 320 GLLVGIQLD--VPAGPLVDACRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEIL 374 (382)
T ss_pred ceEEEEEec--CccHHHHHHHHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHH
Confidence 899999983 3567899999999999988632 489999988622245666666554
No 220
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.89 E-value=3.2e-21 Score=189.69 Aligned_cols=316 Identities=16% Similarity=0.138 Sum_probs=209.9
Q ss_pred CCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++++|+..+ .+.+ ..+|++.+++.+ +.. +..|+.+...+|.++|+++.+. +.+++++++++|++.++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~Al 109 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAAL 109 (397)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence 467889999886 2333 357899888876 322 1233444467899999998763 69999999999999999
Q ss_pred HHhc-------CCC-CEEEEcCCCchhHHHHH-HHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594 164 RCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI 222 (422)
Q Consensus 164 ~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (422)
+... .+| ++|+..+-.|++....+ ...+.. +..++ ..|++.+++.+. +++++|
T Consensus 110 k~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aav 183 (397)
T TIGR03246 110 KLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-----YNDLAAAKALIS-DKTCAV 183 (397)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-----CCCHHHHHHHhc-cCeEEE
Confidence 9541 123 56888888787554333 222321 12222 237999999996 678999
Q ss_pred EEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 223 ~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
+++.++++.|... +.+.+++| |+. |+++|+||+|..+...+.... ....+...-+.+++|.++ +|+++|++++
T Consensus 184 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a-~~~~gv~pDi~t~~K~lg-gG~pigav~~ 261 (397)
T TIGR03246 184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA-YMHYGVTPDILTSAKALG-GGFPIGAMLT 261 (397)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh-hhhcCCCCCEEEeehhhh-CCcceeEEEE
Confidence 9887777777654 65555554 544 999999999987754333211 111111122337899998 8999999999
Q ss_pred CHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCC
Q 014594 298 PLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 298 ~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~ 371 (422)
++++++.+.... ..|+.+++.+.++.++|+..+..+..++++++.+++.+.|++++ .+...+..|.++.+.+.+
T Consensus 262 ~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~ 341 (397)
T TIGR03246 262 TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTE 341 (397)
T ss_pred cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcC
Confidence 999988875432 23667888888888888643211277788888888888887753 122234456666676643
Q ss_pred C--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 G--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~--~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
. .....+++.|.++||.+.+.. .+++|++++...+.++++++++++
T Consensus 342 ~~~~~~~~~~~~l~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l 389 (397)
T TIGR03246 342 AYQGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARF 389 (397)
T ss_pred chhhHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 2 246788899999999998753 479999765433335555555544
No 221
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=5.8e-21 Score=186.75 Aligned_cols=240 Identities=18% Similarity=0.197 Sum_probs=169.0
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~ 203 (422)
.++....|+++++++.|.+ ..+++++++.|+..++.+++++||+|+++.+.|+... ..++..|++++.++.
T Consensus 45 g~p~~~~lE~~la~leg~~--~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---- 118 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGV--GTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---- 118 (397)
T ss_pred CCHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence 3445679999999999864 3455556689999999999999999999999996433 345568999999874
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S 282 (422)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|..... . .....+.++++.|+|
T Consensus 119 -~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----~-~~~~~gaDivv~S~s 191 (397)
T PRK05939 119 -TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----F-RPKDVGASLVINSLS 191 (397)
T ss_pred -CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----c-CccccCCEEEEecCe
Confidence 37999999997 789999999999999999999999999987 999999999863211 0 111235679999999
Q ss_pred hhhccccccceeeecCHHH----------------------HHHHHH-hc--CCCCCcHHHHHHHHHHccCChHHH-HHH
Q 014594 283 KRAGLAGLRVGYGAFPLSI----------------------IEYLWR-AK--QPYNVSVAAEVAACAALQNPIYLE-VKE 336 (422)
Q Consensus 283 K~~~~~G~r~G~i~~~~~~----------------------~~~l~~-~~--~~~~~~~~~~~aa~~~L~~~~~~~-~~~ 336 (422)
|.++..|.++|+++++... +..+.. .. ....+++.....+. +.-+-+. +.+
T Consensus 192 K~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~---rgl~tl~~R~~ 268 (397)
T PRK05939 192 KYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIA---IGAETLALRVD 268 (397)
T ss_pred ecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHH---cCcCcHHHHHH
Confidence 9999889999998774211 111111 11 11234444433332 2224445 777
Q ss_pred HHHHHHHHHHHHHccCCCCc--ccC----------------CCceEEEEEeCCCCCHHHHHHHH
Q 014594 337 ALIKERERLFKLLKDVPFLN--PYP----------------SYSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 337 ~~~~~~~~l~~~L~~~~~~~--~~p----------------~~~~f~~~~~~~~~~~~~~~~~L 382 (422)
+..++...+.+.|+..+.+. .+| ..|..+.+++.++.+...|.+.|
T Consensus 269 ~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l 332 (397)
T PRK05939 269 RSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRL 332 (397)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhC
Confidence 77889999999999876542 133 23556777885322233444444
No 222
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.89 E-value=6.5e-21 Score=188.04 Aligned_cols=316 Identities=14% Similarity=0.095 Sum_probs=212.0
Q ss_pred CCCCCeEEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+++++|+.++..... .+|++.+++.+. . ..+. +..+...++.++++++++. +.++++++|++|++.++
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai 111 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI 111 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence 35677899988754433 478999888752 2 2111 2233467899999999874 68999999999999999
Q ss_pred HHhc---------CC-CCEEEEcCCCchhH-HHHHHHcCC------------EEEEecCCCCCCCCHHHHHHHhhc--CC
Q 014594 164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNGA------------AVVKVPRKSDFSLNVELIADAVER--EK 218 (422)
Q Consensus 164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~d~~~l~~~i~~--~~ 218 (422)
+... .+ .+.|+....+|+.. .......|. .++.++ ..|++.+++.+++ ++
T Consensus 112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-----YNNLEALEEALEDHGPN 186 (401)
T ss_pred HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-----CCCHHHHHHHHHhcCCC
Confidence 9642 12 36688888888743 222222221 123332 1278999988853 45
Q ss_pred CeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcccccc
Q 014594 219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLR 291 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r 291 (422)
..+|+++.+++++|...+ .+++.++++. |+++|+||+|..|...+.... .....++++ +++|.++.+|+|
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~---~~gK~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV---LLGKALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE---EeeccccCCCCC
Confidence 678888899999999998 6677777776 999999999987754333221 111123333 467999866699
Q ss_pred ceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEE
Q 014594 292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL--NPYPSYSNFILC 367 (422)
Q Consensus 292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~ 367 (422)
+|++++++++++.+..... .++.+++.+.++.++|+..+.....++.++..+++.+.|++++.. ...+..|.+..+
T Consensus 264 ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i 343 (401)
T TIGR01885 264 VSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAI 343 (401)
T ss_pred cEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEE
Confidence 9999999999887754222 466788889888888864221125567777789999999887421 223345666666
Q ss_pred EeCCC---CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 368 EVTSG---MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 368 ~~~~~---~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.. .+..++.+.|.++||.+.+.. ++.+||++....+.+++.+++++|
T Consensus 344 ~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 344 VIDESKTGRTAWDLCLKLKEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred EeccCcchhHHHHHHHHHHhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 66433 256789999999999998754 579999975322234455444443
No 223
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=7.9e-21 Score=184.96 Aligned_cols=215 Identities=17% Similarity=0.186 Sum_probs=160.1
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHH---HHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~g~~~~~v~~ 199 (422)
.+|+++....|++.++++.|.+ ..+++++| +.++..++. ++++||+|+++.|.|. .|.. .+...|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG-~aai~~~~~-~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSG-MAAITAVMM-LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-ceEEeCCH-HHHHHHHHH-HhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 4567777899999999999964 35555555 568877664 7899999999999997 4443 33457999998873
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... .. ..+.++++
T Consensus 122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~----~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PI----SLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hh----hhCCeEEE
Confidence 38999999997 689999999999999999999999999987 99999999997533221 11 23446999
Q ss_pred ccChhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|+||.++.++ .-.|++++ ++++++++...+.. ...++.....+. .....+. +.++..++...+.+.|++.+
T Consensus 191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~---~~l~tl~~R~~~~~~na~~la~~L~~~~ 267 (377)
T PRK07671 191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLL---RGLKTLGIRMEEHETNSRAIAEFLNNHP 267 (377)
T ss_pred ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHH---cCcChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999887443 23566665 56788877765554 334554444333 3334455 78888899999999999876
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 268 ~v 269 (377)
T PRK07671 268 AV 269 (377)
T ss_pred Ce
Confidence 44
No 224
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=5e-20 Score=179.73 Aligned_cols=307 Identities=12% Similarity=0.059 Sum_probs=196.5
Q ss_pred CCeEEcCCCC-CCCCCCHHHHHHHh----cCC-C-----CCCCC------Cc-chHHHHHHHHHHcCCCCCCEEEeCCHH
Q 014594 95 EDIVKIDANE-NPYGPPPEVREALG----QLK-F-----PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGAD 156 (422)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~----~~~-~-----~~~y~------~~-~~~~lr~~la~~~~~~~~~i~~~~G~~ 156 (422)
.++++|.+|+ -.+..+|.+.+++. +.. . .+... .. -..++|+.++++++.+ +.+++++|++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~~ 82 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGYM 82 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChHH
Confidence 4568887764 34555555554443 321 0 11111 11 2678999999999974 4477777775
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc
Q 014594 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD 231 (422)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt 231 (422)
. +..+...+.++||.|++..-.|.......+......+.++ ..|++.+++.+++ .++++|++++++|++
T Consensus 83 a-~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~ 156 (370)
T PRK05937 83 A-NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK 156 (370)
T ss_pred H-HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence 4 4455555667888888777777666555555443444443 4689999998863 235577788999999
Q ss_pred CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594 232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~ 307 (422)
|.+.|.+++.++++. |+++++||+|.....+.... ......+..+.+.||||.+|..| +.++..++..+.+..
T Consensus 157 G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~ 233 (370)
T PRK05937 157 GTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLML 233 (370)
T ss_pred CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHH
Confidence 999999999999987 99999999998643222111 11111222367899999998767 334556766665553
Q ss_pred hcCC----CCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 308 AKQP----YNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 308 ~~~~----~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
...+ .+.+++...++.++++ +.. ...++++++.++++.+.|...+. +....+.++ +.+.+.+.+
T Consensus 234 ~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~-~~~~~~~~~ 304 (370)
T PRK05937 234 NSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLP-GISEQELYS 304 (370)
T ss_pred hCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeC-ChhHHHHHH
Confidence 3333 2455666555555553 221 12667788888888888764321 112234454 345678888
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.|.++||.+..... ...+++|||+. +.+|++++.++|+.+
T Consensus 305 ~L~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~ 347 (370)
T PRK05937 305 KLVETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATY 347 (370)
T ss_pred HHHHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 99999999875432 23568999994 677788888877653
No 225
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.88 E-value=1.4e-20 Score=186.26 Aligned_cols=327 Identities=14% Similarity=0.062 Sum_probs=205.6
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~---y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~ 160 (422)
..+++.++|+..+.. .+ ..+|++.+++.+ +... .. ++.+...++.+.|++.... ..+.+++++++++|++
T Consensus 29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 108 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE 108 (420)
T ss_pred eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 346788999988742 22 357888888876 3211 11 2333355777777777642 2368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCCCC-----------CCHHHHHHH
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS-----------LNVELIADA 213 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~-----------~d~~~l~~~ 213 (422)
.+++.-. ....+|+....+|++....+... |- .+..++....+. -+++.+++.
T Consensus 109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
T TIGR00700 109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI 188 (420)
T ss_pred HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence 9998432 22357888888897654433321 11 122232211100 124566666
Q ss_pred hh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594 214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 214 i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 284 (422)
+. .+++.+|++.....-+|.+++ .+++.++|+. |+++|+||+|.+|...+.... ....+....+.+|||.
T Consensus 189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a-~~~~~~~pDi~~lsK~ 267 (420)
T TIGR00700 189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFA-CEHEGPEPDLITTAKS 267 (420)
T ss_pred HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHH-HhhcCCCCCEEEeecc
Confidence 52 256788988877777898887 4455556665 999999999999865443211 1122222234468999
Q ss_pred hccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc
Q 014594 285 AGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358 (422)
Q Consensus 285 ~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~ 358 (422)
++ +|+|+||+++++++++.+.. ....++.+++++.++.++|+ ++.+.+ ..+.-+..++.+.+..+.++.+...
T Consensus 268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v 346 (420)
T TIGR00700 268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV 346 (420)
T ss_pred cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 98 99999999999999887753 23457889999999977764 334444 3333333344444433445544334
Q ss_pred CCCceEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 359 PSYSNFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 359 p~~~~f~~~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
...|.++++++.+. .....+.+.+.++||.+.++..+ ++++||+++...+.++|.++++++
T Consensus 347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l 414 (420)
T TIGR00700 347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDIL 414 (420)
T ss_pred eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence 45688888877321 11355667777999999987543 379999986422346677776655
No 226
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.1e-20 Score=186.18 Aligned_cols=215 Identities=17% Similarity=0.157 Sum_probs=156.8
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 200 (422)
+++++...+|+++++++.|. +..++++++++++..++.+++++||+|+++.+.|........ ..|+++..++.
T Consensus 54 r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred CCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 34667778999999999984 356677888899999999999999999999999974333332 25667666652
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|...... ... ..+.++++.
T Consensus 131 ----~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~ 200 (425)
T PRK06084 131 ----DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVH 200 (425)
T ss_pred ----CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEE
Confidence 48999999997 689999999999999999999999999987 9999999999843321 111 234569999
Q ss_pred cChhhhccccccceeeecC-HHH--HH---HH----------------------------H---HhcCCCCCcHHHHHHH
Q 014594 280 TFSKRAGLAGLRVGYGAFP-LSI--IE---YL----------------------------W---RAKQPYNVSVAAEVAA 322 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~-~~~--~~---~l----------------------------~---~~~~~~~~~~~~~~aa 322 (422)
|++|.++.+|.++|.+++. ..+ .+ .. . .......+++.....+
T Consensus 201 S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~ 280 (425)
T PRK06084 201 SLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLI 280 (425)
T ss_pred CchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999998888888877763 221 00 00 0 0011123444443333
Q ss_pred HHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 323 CAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
..-| +-+. +.++..++...+.+.|++++.+
T Consensus 281 lrgl---~tl~~R~~~~~~na~~la~~L~~~p~v 311 (425)
T PRK06084 281 LQGL---ETLALRMERHTENALKVARYLQQHPQV 311 (425)
T ss_pred HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3333 3344 7778889999999999987654
No 227
>PLN02624 ornithine-delta-aminotransferase
Probab=99.88 E-value=1.7e-20 Score=187.80 Aligned_cols=317 Identities=15% Similarity=0.144 Sum_probs=205.7
Q ss_pred CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~---~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.+++.++|+..+.... ..+|++.+++.+ +. .. ..+..+...+|.+.++++++. +.++++++++++++.+
T Consensus 71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A 148 (474)
T PLN02624 71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA 148 (474)
T ss_pred ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence 45678899998875433 247999988875 22 11 223445567899999999863 6899999999999999
Q ss_pred HHHhcC---------CC-CEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHhhc--C
Q 014594 163 MRCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E 217 (422)
Q Consensus 163 ~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~--~ 217 (422)
++.... ++ ..|+....+|++....+...... +..++. -|++.+++.++. .
T Consensus 149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD 223 (474)
T ss_pred HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence 984321 12 25777878887554333221111 112221 278899988853 4
Q ss_pred CCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccc
Q 014594 218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL 290 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~ 290 (422)
++++|+++.++|++|.+++ .+++.++|+. |+++|+||+|..|...+..... .+..++++ +++|.+|.+++
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv---~lsK~lggG~~ 300 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVV---ILGKALGGGVI 300 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEE---EecccccCCCC
Confidence 6789999999999999998 6667777766 9999999999977544432221 11222323 36899997669
Q ss_pred cceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCC-CcccCCCce
Q 014594 291 RVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPF-LNPYPSYSN 363 (422)
Q Consensus 291 r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~~ 363 (422)
++|++++++++++.+.... ..++.+++.+.++.++|+..+..+..++..++.+++.+.|++ ++. +......|.
T Consensus 301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~ 380 (474)
T PLN02624 301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGL 380 (474)
T ss_pred cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEE
Confidence 9999999998888765333 335678899988888885321111344444555555555544 231 221234566
Q ss_pred EEEEEeCCC----CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSG----MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~----~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++.+.+... ..+.++++.|.++||.+.++. ++++||++....+.+++++++++|
T Consensus 381 ~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L 438 (474)
T PLN02624 381 LNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL 438 (474)
T ss_pred EEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 666666421 235678888999999998764 588999974322234455555443
No 228
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=2.8e-20 Score=183.85 Aligned_cols=312 Identities=16% Similarity=0.093 Sum_probs=207.4
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C---C----CCCCC-Cc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K---F----PYIYP-DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~---~----~~~y~-~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.+.|+.+... +.|+.+.+++.+. . . .+... .. ...+.++++ +++|+++++|++++|++++++.++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence 457999976644 3477777777542 1 0 11111 11 122333335 789999999999999999999999
Q ss_pred HHhcCCC---CEEEEcCCCchhH----HHHHHHcCCEE----EEecCCCCCCCCHHHHHHHhh--cCCCeEEEEeCCCCc
Q 014594 164 RCVLDPG---DKIVDCPPTFTMY----EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP 230 (422)
Q Consensus 164 ~~l~~~g---d~Vl~~~p~y~~~----~~~~~~~g~~~----~~v~~~~~~~~d~~~l~~~i~--~~~~~~i~l~~p~NP 230 (422)
..+++++ +.|++....|+.. ...++..|+++ +.++.++++.+|++.+++.+. .+++++|++++++|.
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~ 183 (406)
T TIGR01814 104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY 183 (406)
T ss_pred HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 9887664 3688888889752 22345678887 466655556789999988874 267999999999999
Q ss_pred cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh
Q 014594 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA 308 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~ 308 (422)
||.+.|.+++.++++. |+++++|++++.... .-.+...+.++++.|..|.+ |.+| |.++..++....+...
T Consensus 184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~----~id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~~~~~~~p~ 256 (406)
T TIGR01814 184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNV----PLDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEKHAHTERPR 256 (406)
T ss_pred cceecCHHHHHHHHHHcCCEEEEEcccccCCc----ccccccCCCCEEEEcCccccCCCCC---eEEEEehhhhhhcCCC
Confidence 9999999999999997 999999999985322 11122345568899999965 3344 4344333323222110
Q ss_pred c-------------------------CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCC----CCc
Q 014594 309 K-------------------------QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVP----FLN 356 (422)
Q Consensus 309 ~-------------------------~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~----~~~ 356 (422)
. ...+++.....++.++|+.- ...+ ++++.++..+++.+.|+++. .+.
T Consensus 257 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~ 336 (406)
T TIGR01814 257 LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLT 336 (406)
T ss_pred CCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence 0 01335555655555555431 1234 77888899999999887642 233
Q ss_pred cc-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594 357 PY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMHL 421 (422)
Q Consensus 357 ~~-p~----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~l 421 (422)
+. |. .+..+.+.++ .+.+++.+.|.++||.+.... ++.||||++ +.++++++.++++.+
T Consensus 337 i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~~~----~~~iRiS~~~~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 337 IITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDKRE----PSVIRVAPVPLYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred EeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEeccC----CCeEEEechhccCCHHHHHHHHHHHHHH
Confidence 22 21 2346667776 467889999999999886432 469999983 456677777777653
No 229
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=4.5e-20 Score=185.19 Aligned_cols=315 Identities=18% Similarity=0.188 Sum_probs=211.9
Q ss_pred cCCCCCCCCCCHHHHHHHhcC-CC--CCCC-CC---cch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH--HH-H
Q 014594 100 IDANENPYGPPPEVREALGQL-KF--PYIY-PD---PES----RRLRAALAKDSGLESDHILVGCGADELIDLI--MR-C 165 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~-~~--~~~y-~~---~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~~--~~-~ 165 (422)
++.|+..+..+|.+.+++.+. .. -+.| |. .|. .++++.+++++|++...+..++|+++.+..+ ++ .
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence 556666777788888888763 11 1345 22 133 3566777777898755666667776665533 33 3
Q ss_pred hcCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CCHHHH
Q 014594 166 VLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDL 240 (422)
Q Consensus 166 l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~e~l 240 (422)
+.++|| +|+++.|.|+.+...++..|++++.++.+.++.+|++++++.+. +++++|++++|| |||.+ .+.+++
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~eI 230 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILEI 230 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHHH
Confidence 466776 99999999999999999999999999987778999999999997 689999999998 99976 467888
Q ss_pred HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHHh-------
Q 014594 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA------- 308 (422)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~~------- 308 (422)
.++++. |+++++|+++.....+. . .....+.++++++.+|.++.| |-.+|++.+++++.+++.-.
T Consensus 231 ~~~a~~~gal~iVD~a~~~~~~g~--~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~ 307 (481)
T PRK04366 231 AEIVHEAGGLLYYDGANLNAILGK--A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD 307 (481)
T ss_pred HHHHHHcCCEEEEEecChhhhccc--C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC
Confidence 888876 99999999985221111 1 122445678999999987643 44578888888777665200
Q ss_pred --------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EEEEe
Q 014594 309 --------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEV 369 (422)
Q Consensus 309 --------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~~~~ 369 (422)
...++.+.....++..++.. .+.++ +.++..++.+++.+.|+++ +....+ ...+ +.++.
T Consensus 308 ~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~-~~~~~~~~~~~ 385 (481)
T PRK04366 308 RYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYD-RPCMHEFVLSG 385 (481)
T ss_pred ceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC-CCeeEEEEEEC
Confidence 00122233444444444443 23344 5677788899999999886 211222 2221 22332
Q ss_pred C----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 370 T----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 370 ~----~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+ .+.+..++.+.|.++||.+.....+ ...+++|+++. +.+++|+|.++++++
T Consensus 386 ~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 386 KKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred ccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 2 1457899999999999987633222 23678999986 456788888887764
No 230
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=1.8e-19 Score=176.62 Aligned_cols=299 Identities=15% Similarity=0.160 Sum_probs=202.9
Q ss_pred HHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHH
Q 014594 112 EVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAV 189 (422)
Q Consensus 112 ~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~ 189 (422)
+..+++.+ +..+..++.+...++|+++++++|.+ +.++++|+++++..++.++ +++||+|+++.|+|..+...+..
T Consensus 11 ~~~~~v~~~~~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~ 88 (380)
T TIGR03588 11 DDIDAVVEVLKSDFLTQGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALY 88 (380)
T ss_pred HHHHHHHHHHhcCCccCChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHH
Confidence 33455554 22222224456789999999999974 5667778999999999988 78999999999999988888888
Q ss_pred cCCEEEEecCC-CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC
Q 014594 190 NGAAVVKVPRK-SDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE 263 (422)
Q Consensus 190 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~ 263 (422)
.|++++.++.+ +++.+|++++++.+++ +++++|++ .|++|...+.+++.++++. |++||+|++|+.+. +++
T Consensus 89 ~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~ 165 (380)
T TIGR03588 89 CGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGG 165 (380)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCC
Confidence 99999999974 4678999999999963 57899885 4568999999999999987 99999999998653 222
Q ss_pred chhhhhhcCCcEEEEccCh--hhhccccccceeeec-CHHHHHHHHHhcCC---------------------------CC
Q 014594 264 SRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP---------------------------YN 313 (422)
Q Consensus 264 ~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~-~~~~~~~l~~~~~~---------------------------~~ 313 (422)
...... .. ..+.+.||+ |.++. | ..|+++. ++++.++++..... +.
T Consensus 166 ~~~g~~-~~-~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~ 241 (380)
T TIGR03588 166 KPVGNC-RY-ADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYR 241 (380)
T ss_pred EeCCCc-cc-cceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccC
Confidence 222211 01 246777775 76653 3 4677776 56777766543210 11
Q ss_pred CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc-CC-C---ceEEE-EEeC--CCCCHHHHHHHHHhC
Q 014594 314 VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY-PS-Y---SNFIL-CEVT--SGMDAKKLKDDLAKM 385 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~---~~f~~-~~~~--~~~~~~~~~~~L~~~ 385 (422)
++.+....+...|+. +.+..++.+++.+++.+.|.+++.+.+. +. . ..+++ +.++ .+.+.+++.+.|.++
T Consensus 242 m~~l~aa~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~ 319 (380)
T TIGR03588 242 MTDIQAALGLSQLKK--LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAA 319 (380)
T ss_pred ccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHC
Confidence 222333333333432 2226667788888899999888755432 21 1 22332 3443 245789999999999
Q ss_pred CcEEEeCCCC--------------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 386 GVMIRHYNNK--------------EL-------KGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 386 gI~v~~~~~~--------------~~-------~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
||.++.+..+ .. ...+++.+. +.++++.+.++++++
T Consensus 320 gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 320 GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 9998743211 01 145777654 466778888877754
No 231
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=4.3e-20 Score=182.56 Aligned_cols=211 Identities=16% Similarity=0.178 Sum_probs=156.2
Q ss_pred CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~ 203 (422)
++....|+++++++.+ .++.++++|+++++.+++. ++++||+|+++.|.|..+.. .....|++++.++.
T Consensus 132 npt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~---- 204 (464)
T PLN02509 132 NPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---- 204 (464)
T ss_pred CHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence 3446788889999887 3567777888899977664 78999999999999987753 34568999988863
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S 282 (422)
.|++++++++. +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ... ..+.++++.|++
T Consensus 205 -~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaDivv~S~t 277 (464)
T PLN02509 205 -TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSAT 277 (464)
T ss_pred -CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCcEEEecCc
Confidence 47899999996 789999999999999999999999999987 9999999998643321 111 234568999999
Q ss_pred hhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 283 KRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 283 K~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
|.++.+| .-.|+++++ +.+.+.+...+.. ..+++.....+...| +.+. +.++..++.+++.+.|++++.+
T Consensus 278 K~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L---~tL~~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 278 KFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI---KTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred ccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9876433 335777764 4455554433222 234555544444433 4456 8888999999999999988755
No 232
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.87 E-value=9e-20 Score=177.63 Aligned_cols=215 Identities=14% Similarity=0.115 Sum_probs=156.1
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~ 199 (422)
.+|+++....|+++++++.|.+ ..+++ ++++.++..++. ++++||+|+++.|.|+.. ...+...|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~la~l~g~~-~al~~-~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEGGV-KGFAF-ASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-CEEEE-CCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 4456777889999999999953 34544 555678887775 789999999999999643 3345568989888863
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... .. ..+.++++
T Consensus 122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~-p~----~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN-PL----LLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC-cc----ccCCCEEE
Confidence 37999999997 689999999999999999999999999997 99999999998543221 11 23445899
Q ss_pred ccChhhhcccc-ccceeeecC-HHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|++|.++.+| .-.|+++++ +++.+++...+... ..++.....+...+ ..+. +.++..++...+.+.|++.+
T Consensus 191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl---~tl~~R~~~~~~~a~~la~~L~~~p 267 (380)
T PRK06176 191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI---KTLGLRMEAHQKNALCVAEFLEKHP 267 (380)
T ss_pred ecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999887555 346777774 56666665544432 23444433333222 3344 66677778888888888765
Q ss_pred CC
Q 014594 354 FL 355 (422)
Q Consensus 354 ~~ 355 (422)
.+
T Consensus 268 ~v 269 (380)
T PRK06176 268 KV 269 (380)
T ss_pred Ce
Confidence 43
No 233
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=1.1e-19 Score=179.66 Aligned_cols=325 Identities=14% Similarity=0.145 Sum_probs=203.8
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~---y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~ 160 (422)
+.+++.++|+..+.. .+ ..+|++.+++.+ +... .. ++.+...++-+.|++..+. ..+.+++++++++|++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence 456788999977642 23 357888888776 3211 11 1233345677777776642 2368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CCC----CHHHHHHHhh----
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE---- 215 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~----d~~~l~~~i~---- 215 (422)
.+++... ....+|+....+|++....+.. .|. .++.+|...+ .++ +++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK09792 116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE 195 (421)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence 9999542 2235789889888765433222 121 1222332111 112 3477888775
Q ss_pred cCCCeEEEEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccc
Q 014594 216 REKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA 288 (422)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~ 288 (422)
..++++|+++..++|+|... +.+.+++| |+. |+++|+||+|.+|...+... ...+..+. +.+|+|.++ +
T Consensus 196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD---i~t~gK~l~-~ 271 (421)
T PRK09792 196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD---LMTMAKSLA-G 271 (421)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc---EEEeehhhc-C
Confidence 24678999987799999876 75555555 444 99999999999986544322 22222222 568899998 8
Q ss_pred cccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 289 G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
|+|+||+++++++.+.+... ...|+.++++++++.++++ ++++++ .++.-+..++.+.+..++++.+......|
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~G 351 (421)
T PRK09792 272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLG 351 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccc
Confidence 99999999999998876532 2357789999996666654 444444 33222222333333223455433333448
Q ss_pred eEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 363 NFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++|++++++ .....+.+.+.++||.+.+.. ..++.||+.++...+.+++.++++.+
T Consensus 352 l~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g--~~~~~irl~P~l~i~~~ei~~~~~~l 415 (421)
T PRK09792 352 SMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG--AYGNVIRFLYPLTIPDAQFDAAMKIL 415 (421)
T ss_pred eEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC--CCCCEEEEeCCCcCCHHHHHHHHHHH
Confidence 9999999743 234677888889999996422 23589999977522234555555443
No 234
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.1e-19 Score=176.24 Aligned_cols=212 Identities=12% Similarity=0.060 Sum_probs=159.4
Q ss_pred CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~ 203 (422)
+|....|++.++.+.+- ++. ++++++++|+..++.+++++||+|+++.|.|+.+.. .++..|+++..++.+
T Consensus 63 nPt~~~Le~~la~le~~-~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~--- 137 (395)
T PRK05967 63 TPTTDALCKAIDALEGS-AGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE--- 137 (395)
T ss_pred ChHHHHHHHHHHHHhCC-CCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC---
Confidence 44456799999988763 334 555557899999999999999999999999987664 456789999888632
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S 282 (422)
+.+.++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|.....- .+ -..+.++++.|.+
T Consensus 138 --~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~p----l~~GaDivv~S~t 209 (395)
T PRK05967 138 --IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RP----LDFGVDISIHAAT 209 (395)
T ss_pred --CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Ch----hHcCCCEEEEecc
Confidence 3578999997 689999999999999999999999999987 9999999999843211 11 1345669999999
Q ss_pred hhhcc-ccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 283 KRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 283 K~~~~-~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
|.++. .+.-.|+++.++++.+++...... ..+++.... .+++.-+-+. +.++..++...+.+.|++++.+
T Consensus 210 Ky~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~---l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 210 KYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTY---QILRGLRTMGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred cccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHH---HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 97542 336678888888777766543333 234555533 3333334556 7788889999999999988755
No 235
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=3.2e-19 Score=176.11 Aligned_cols=317 Identities=16% Similarity=0.139 Sum_probs=207.6
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC--C-CCCCC-------CCcchHHHHH----HHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~y-------~~~~~~~lr~----~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.++|-.++|.. +|.+++++... . ++.+| +++...+|++ .+++++|.+ .-++.+++|+.|+..
T Consensus 29 ~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-~alv~~~SG~~A~~~ 105 (416)
T PRK13034 29 DHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-YANVQPHSGSQANGA 105 (416)
T ss_pred cCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-ceEEecCCcHHHHHH
Confidence 458888888776 78999888763 1 22211 1233567888 999999964 233456788999999
Q ss_pred HHHHhcCCCCEEEEcCCCchh-HHHHHHH--cCCEE--EEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTM-YEFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~--~g~~~--~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++.+++++||+|+++..+|.. +...++. .+... +.++. ..++.+|++++++.+...++|+|+++++. +|...
T Consensus 106 ~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~ 183 (416)
T PRK13034 106 VYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPREL 183 (416)
T ss_pred HHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccccc
Confidence 999999999999999998865 2211111 12222 23332 23467999999999865678988876654 67889
Q ss_pred CHHHHHHHHcC-CCeEEEccCCccccCC-CchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCCC
Q 014594 236 NDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPY 312 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~~ 312 (422)
+.+++.++++. |+++|+|++|+..... +.....+ ....+++.|++|.++.+ ..|+++++.+ +.+.+.....+.
T Consensus 184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~ 259 (416)
T PRK13034 184 DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPG 259 (416)
T ss_pred CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCc
Confidence 99999999987 9999999998864422 1111111 23568899999987422 2487777654 444444332221
Q ss_pred ---CCcHHHHHHHH-HHccC--ChHHHHHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHHh
Q 014594 313 ---NVSVAAEVAAC-AALQN--PIYLEVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLAK 384 (422)
Q Consensus 313 ---~~~~~~~~aa~-~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~~ 384 (422)
+..+....++. ++++. .++.+.++++.++.+++++.|+++|+....+ +.++.+++.+.. +.+...+.+.|.+
T Consensus 260 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~ 339 (416)
T PRK13034 260 LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALER 339 (416)
T ss_pred ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHh
Confidence 12222222222 22222 2222367889999999999999886433222 466777787753 4466777788989
Q ss_pred CCcEEEeC------CCCCCCCeEEEEecC-------hhhHHHHHHHHhhh
Q 014594 385 MGVMIRHY------NNKELKGYVRVSVGK-------PEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~------~~~~~~~~iRis~~~-------~~~~~~l~~al~~l 421 (422)
+||.+... ..+..+..+|+++.. +++++++.++++++
T Consensus 340 ~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 340 AGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred CCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999852 113346789999653 67788888877653
No 236
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=3.6e-20 Score=174.94 Aligned_cols=223 Identities=16% Similarity=0.067 Sum_probs=158.7
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--C
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S 201 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~ 201 (422)
..+|+.-..++++.+++++|.+ +.+++++|+++++..++.+++++||+|+++.|+|......+...|++++.++.+ .
T Consensus 54 l~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 54 LLDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 3456666889999999999964 355569999999999999999999999999999998888888899999988743 2
Q ss_pred C----CCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhhhcCCc
Q 014594 202 D----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDN 274 (422)
Q Consensus 202 ~----~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~ 274 (422)
+ ..+|++++++++++ .+++++++++| |++|.+++.+++.++++. |+++|+||+|..+ .+.+.........+.
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~ 211 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA 211 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence 2 37899999999964 57899999998 799999999999999987 9999999999753 232221222224577
Q ss_pred EEEEccChhhhccccccceeee-cCHHH--HHHHH---HhcCCCCCcHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHH
Q 014594 275 LIVLRTFSKRAGLAGLRVGYGA-FPLSI--IEYLW---RAKQPYNVSVAAEVAACAALQNP--IYLEVKEALIKERERLF 346 (422)
Q Consensus 275 ~i~~~S~SK~~~~~G~r~G~i~-~~~~~--~~~l~---~~~~~~~~~~~~~~aa~~~L~~~--~~~~~~~~~~~~~~~l~ 346 (422)
++++.|++|.+ +|++.|+++ .+.+. .+++. ...+..+++.....++..++..- +..+..++..++.+.++
T Consensus 212 div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r 289 (294)
T cd00615 212 DIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYAR 289 (294)
T ss_pred cEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 89999999964 777765544 43321 12222 22233455555444444444321 11124455556666666
Q ss_pred HHHc
Q 014594 347 KLLK 350 (422)
Q Consensus 347 ~~L~ 350 (422)
+.|+
T Consensus 290 ~~l~ 293 (294)
T cd00615 290 QEIN 293 (294)
T ss_pred HHHh
Confidence 6554
No 237
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=4.9e-19 Score=176.06 Aligned_cols=327 Identities=15% Similarity=0.121 Sum_probs=208.9
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++++||+..+. ..++ .+|+|.+++.+ +. +. ..+..+...+|.++|+++.+-..+.+++++++++|++.
T Consensus 39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~ 118 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG 118 (433)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence 34678899998873 3343 57888888876 22 11 12334456788999999884345689999999999999
Q ss_pred HHHHh--cCCCCEEEEcCCCchhHHHHHH-HcC--C-----------EEEEecCCCCCC------------CCHHHHHHH
Q 014594 162 IMRCV--LDPGDKIVDCPPTFTMYEFDAA-VNG--A-----------AVVKVPRKSDFS------------LNVELIADA 213 (422)
Q Consensus 162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~-~~g--~-----------~~~~v~~~~~~~------------~d~~~l~~~ 213 (422)
+++.. .....+|+.....|++....+. ..+ . .+..+|..+.+. -|++.+++.
T Consensus 119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 198 (433)
T PRK08117 119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL 198 (433)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence 99952 1223678888888876443322 111 0 122333211110 145667776
Q ss_pred hhc----CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594 214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 214 i~~----~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 284 (422)
+++ .++.+|++.......|.+.+ .+++.++|+. |+++|+||+|.+|...+..... ...+...-+.+|+|.
T Consensus 199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~ 277 (433)
T PRK08117 199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG 277 (433)
T ss_pred HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence 542 45778888877888899887 6777777776 9999999999987654432211 122222234689999
Q ss_pred hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCccc
Q 014594 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPY 358 (422)
Q Consensus 285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 358 (422)
++ +|+++|++++++++++.+.... ..++.++++++++.++|+.-+.....++++++.+++.+.|++ ++.+.-.
T Consensus 278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v 356 (433)
T PRK08117 278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDV 356 (433)
T ss_pred cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeee
Confidence 98 8999999999999988774332 236778999999988886321111455556666666666654 3322224
Q ss_pred CCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 359 PSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 359 p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+..|.++++++.+. .....+.+.+.++||.+.+... ..+++|+++....+.++++++++++
T Consensus 357 rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l 423 (433)
T PRK08117 357 RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDIL 423 (433)
T ss_pred ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence 56677777777321 1245677888899999876432 2579999965322234455555543
No 238
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.85 E-value=8.3e-19 Score=172.31 Aligned_cols=322 Identities=14% Similarity=0.132 Sum_probs=205.9
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +... + .+......+|-+.|.+..+. .+.+++++++++|++.+
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A 114 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA 114 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence 45678899998774 233 357888888876 3211 1 12222345677777766542 36899999999999999
Q ss_pred HHHhcC--------CC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCC----CCCCHHHHHHHhhcCCCeEEEEe
Q 014594 163 MRCVLD--------PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 163 ~~~l~~--------~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
++.... ++ .+|+....+|++....+.. .|..... -+...+ ...|++.+++.+. .+..+.++.
T Consensus 115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aavi~ 193 (408)
T PRK04612 115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGDVAAVML 193 (408)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC-CCCEEEEEE
Confidence 984321 12 4689999999765543332 2211110 010111 0137899999886 344555556
Q ss_pred CCCCccCcCCC--HHHHHH---HHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 226 SPNNPDGSIIN--DEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 226 ~p~NPtG~~~~--~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
.|.+++|.+++ .+.+.+ +|+. |+++|+||+|..|...+..... ...+....+.+|||.++ +|+|+|++++++
T Consensus 194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~ 271 (408)
T PRK04612 194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP 271 (408)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence 67777887765 334444 5554 9999999999987654433222 23345567789999998 899999999999
Q ss_pred HHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCC--
Q 014594 300 SIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS-- 371 (422)
Q Consensus 300 ~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~-- 371 (422)
++.+.+.... ..|+.+++.+.++.++|+.-+-.+..++.+++.+++.+.|++ .+.+......|.++.+.+..
T Consensus 272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~ 351 (408)
T PRK04612 272 KVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH 351 (408)
T ss_pred HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch
Confidence 9887775432 246788999999998886422111556666666666666655 34333345667788787742
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
...+..+.+.|.++||.+.+.. .+.+|+.....-+.++++++++.
T Consensus 352 ~~~a~~i~~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~ 396 (408)
T PRK04612 352 AGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLAR 396 (408)
T ss_pred hhHHHHHHHHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHH
Confidence 1235678888999999998753 47899986532222444444443
No 239
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=7.1e-19 Score=174.51 Aligned_cols=321 Identities=18% Similarity=0.179 Sum_probs=199.6
Q ss_pred CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCCCCC----C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKFPYI----Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~~~~----y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.++|+..+ ...+ ..+|++.+++.+ +..... | ..+...+|-+.|++..+..-+.+++++++++|++.
T Consensus 37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~ 116 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG 116 (443)
T ss_pred ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence 3567889999887 3334 357888888876 322111 1 22234567777777765444689999999999999
Q ss_pred HHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CC--------CCHHHHHHHh
Q 014594 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVELIADAV 214 (422)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~~l~~~i 214 (422)
+++.-. ....+|+.....|++....+.. .|. .+..++.++. +. -+++.+++.+
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 999432 2236788888888754322211 221 1222332111 10 1244566666
Q ss_pred hc----CCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChh
Q 014594 215 ER----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 215 ~~----~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK 283 (422)
.+ +++++|+++..+||+|.+++ . +++.++|+. |+++|+||+|.+|...+.. ....+..++++ ++||
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK 273 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK 273 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence 42 56889998876799999887 3 344445554 9999999999988654432 12222334433 6799
Q ss_pred hhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCCcc
Q 014594 284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFLNP 357 (422)
Q Consensus 284 ~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~ 357 (422)
.++ +|+|+||+++++++++.+.... ..++.+++.+.++.++|+.-+-.+..++.+++.+++.+.|+ +.+.+.-
T Consensus 274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~ 352 (443)
T PRK08360 274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGD 352 (443)
T ss_pred ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 999 8999999999999998886443 24667888888888888641100144444555555555544 3443333
Q ss_pred cCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 358 YPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 358 ~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
....|.++-+++.+. .....+.+.|.++||.+.+.. .+.+|++.. +.++++++.++++
T Consensus 353 vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~l~ 421 (443)
T PRK08360 353 VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDILE 421 (443)
T ss_pred eeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 345677777776321 123467788889999987643 478999765 3444444444443
No 240
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.7e-19 Score=168.06 Aligned_cols=319 Identities=17% Similarity=0.197 Sum_probs=221.2
Q ss_pred hCCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-C---CC-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 90 LGRKPEDIVKIDANE--NPY-GPPPEVREALGQ-L---KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 90 ~~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~---~~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
|+..++++|||..|. +.+ ..+|.+.+++.+ . .+ ++.|.++...+|.+.|++..+ ..+.|+++|+++||++.
T Consensus 37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea 115 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA 115 (404)
T ss_pred ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence 456688999998874 444 468999999976 2 22 355666667888888888887 67899999999999999
Q ss_pred HHHHh---cC-C-CCEEEEcCCCchhHHHHHHHcCCEEEE----ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 162 IMRCV---LD-P-GDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 162 ~~~~l---~~-~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+++.- .. + ..+|+....+|++-...+...+.+..+ -|..+++ --|+++++++++ +++.+|++...+
T Consensus 116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ 194 (404)
T COG4992 116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ 194 (404)
T ss_pred HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence 99843 22 2 247888888886443333222222211 0211221 138999999998 599999999999
Q ss_pred CccCcCCCHHHH----HHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 229 NPDGSIINDEDL----LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 229 NPtG~~~~~e~l----~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
--.|++.+.++. ++||+. |+++|.||++..+...+..... .+-.++++ ++.|.+| .|+.+|.+++++.+
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~---tlaK~Lg-GG~PigA~la~~~~ 270 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL---TLAKALG-GGFPIGAMLATEEI 270 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE---Eeecccc-CCccceeeEEchhh
Confidence 999999876544 456665 9999999999998766654332 22233333 4679998 88999999999555
Q ss_pred HHHHH--HhcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEEEEeCCC
Q 014594 302 IEYLW--RAKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSNFILCEVTSG 372 (422)
Q Consensus 302 ~~~l~--~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~~~~~~~ 372 (422)
.+.+. ....+|+.|+++.+++.++|+- ++.++ +.++..+++.+.|+ +.+.+.-....|.++-+++...
T Consensus 271 ~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~---~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~ 347 (404)
T COG4992 271 ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLE---NVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP 347 (404)
T ss_pred hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHH---HHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc
Confidence 55443 2234588999999988888763 34444 44444555555554 4454445678899999999644
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..+.++.+.|.++|+++.+.. ++.+|+.....-+.+++.++++++
T Consensus 348 ~~a~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l 392 (404)
T COG4992 348 YRARDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDAL 392 (404)
T ss_pred ccHHHHHHHHHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHH
Confidence 458899999999999998866 579999976433334455554443
No 241
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=6e-19 Score=174.42 Aligned_cols=325 Identities=13% Similarity=0.127 Sum_probs=206.8
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--C---CCCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--Y---IYPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~---~y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~ 160 (422)
+.+++.++|+..+.. .+ ..+|++.+++.+ +... . .++.+...++-+.+++.... ..+.+++++++++|++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence 456788999987742 23 357888888876 3211 1 12333455777888877653 2468999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCCE-------------EEEecCCCC-CC----CCHHHHHHHhhc---
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKSD-FS----LNVELIADAVER--- 216 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~-~~----~d~~~l~~~i~~--- 216 (422)
.+++.-. ....+|+....+|++....+.. .|.. +..++.++. .+ -+++.+++.+.+
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 9998432 2235788888889766544432 2210 112221111 11 236667777742
Q ss_pred -CCCeEEEEeCCCCccCc-CCCHHHHHHHHc---C-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccc
Q 014594 217 -EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA 288 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~ 288 (422)
.++.+|++....+..|. +.+.+.+++|.+ . |+++|+||+|..|...+... ...+..+++ .++||.++ +
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi---v~~sK~l~-~ 271 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL---ITMAKSLG-G 271 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE---Eeeehhhc-C
Confidence 45788888877888886 567666655544 4 99999999999886544321 122222332 36899999 8
Q ss_pred cccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCc
Q 014594 289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYS 362 (422)
Q Consensus 289 G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~ 362 (422)
|+|+||+++++++++.+.... ..++.+++.+.++.++|+..+..+..++.+++.+++.+.|+++ +.+......|
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 351 (421)
T PRK06777 272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARG 351 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCce
Confidence 999999999999988775433 3477899999999999963221126667777777777777653 4333234555
Q ss_pred eEEEEEeCC---CCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 363 NFILCEVTS---GMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~~~---~~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.+.+.. +.+ ...+...+.++||.+.++..+ ++++||.+....+.++++++++++
T Consensus 352 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l 415 (421)
T PRK06777 352 SMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNIL 415 (421)
T ss_pred EEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 555555431 111 234555567899999887533 379999985333345566666654
No 242
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=9.6e-19 Score=172.90 Aligned_cols=213 Identities=16% Similarity=0.157 Sum_probs=155.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~ 202 (422)
+++....|+++++++.|.+ ..++++++++|+..++.+++++||+|+++.+.|... ...+...|++++.++.
T Consensus 61 ~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~--- 135 (427)
T PRK05994 61 TNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA--- 135 (427)
T ss_pred CCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC---
Confidence 4556788999999999964 478889999999999999999999999999999743 3345668999999874
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
.|++.++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .. + ..+.++++.|+
T Consensus 136 --~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~p---l-~~gaDivv~S~ 207 (427)
T PRK05994 136 --DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RP---I-EHGADIVVHSL 207 (427)
T ss_pred --CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Cc---c-ccCCcEEEEcC
Confidence 37899999997 689999999999999999999999999987 9999999999732211 11 1 23556899999
Q ss_pred hhhhccccccceeeecC-HH-----------------------HHHHHH-----------Hhc-CCCCCcHHHHHHHHHH
Q 014594 282 SKRAGLAGLRVGYGAFP-LS-----------------------IIEYLW-----------RAK-QPYNVSVAAEVAACAA 325 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~-~~-----------------------~~~~l~-----------~~~-~~~~~~~~~~~aa~~~ 325 (422)
+|.+|.+|-.+|.+++. .. +.+.+. ... ....++++....+...
T Consensus 208 tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~ 287 (427)
T PRK05994 208 TKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTG 287 (427)
T ss_pred ccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 99887666555644431 11 111100 011 1123444444433333
Q ss_pred ccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 326 LQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 326 L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
| +.+. +.++..++...+.+.|++++.+
T Consensus 288 l---~tL~~r~~~~~~~a~~la~~L~~~p~v 315 (427)
T PRK05994 288 I---ETLPLRMQRHSDNALAVAEWLKGHPKV 315 (427)
T ss_pred c---ccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3 3455 7778888899999999987654
No 243
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=1e-18 Score=173.22 Aligned_cols=319 Identities=17% Similarity=0.117 Sum_probs=206.9
Q ss_pred CCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANENPY---GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.+++.++|+..+.... ..+|.+.+++.+ +... ..++.+...+|.++|++.+. ..+.+++++++++|++.+++.
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~ 125 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL 125 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence 4577899998875332 467888888876 3222 22355566789999988774 356899999999999999996
Q ss_pred hcC--CCCEEEEcCCCchhHHHHHHHc-CC------------EEEEecCC--CCCCCCHHHHHHHhhc--CCCeEEEEeC
Q 014594 166 VLD--PGDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS 226 (422)
Q Consensus 166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i~l~~ 226 (422)
... .+++|+...++|+++...+... |. ....++.. .-...|++.+++.+.+ +++.+|+++.
T Consensus 126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp 205 (426)
T PRK00062 126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP 205 (426)
T ss_pred HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 432 3578999999998876433221 10 00000000 0011378899888853 4677888885
Q ss_pred CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 227 p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
....+|.+.+ .+++.+|++. |+++|+||+|..+..+... ....+..+. +.+|+|.++ .|+++|+++++++
T Consensus 206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD---i~~~gK~l~-~G~p~ga~~~~~~ 281 (426)
T PRK00062 206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD---LTTLGKIIG-GGLPVGAFGGRRE 281 (426)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc---hHhhhhHhh-CCCcceeeeEHHH
Confidence 5555899988 5666777766 9999999999977432211 111221122 468899998 8899999999999
Q ss_pred HHHHHHHhc-----CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594 301 IIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 301 ~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 371 (422)
+++.+.... ..++.+++.++++.++|+. .+..+ .++.....++.|.+.++++++....+..|.++.+.+..
T Consensus 282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~ 361 (426)
T PRK00062 282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTD 361 (426)
T ss_pred HHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEec
Confidence 998885221 2367888998888888763 33444 55555555666665555666544334566666665531
Q ss_pred C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594 372 G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 419 (422)
Q Consensus 372 ~-~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 419 (422)
. . + ...+.+.|.++||.+.+.. .+.+|+++. +.++++++.+.++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l~ 419 (426)
T PRK00062 362 EPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAAR 419 (426)
T ss_pred CCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC----cCceeeeccCCHHHHHHHHHHHH
Confidence 1 0 1 3578888899999998754 235667654 3444555555544
No 244
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.1e-18 Score=169.04 Aligned_cols=213 Identities=12% Similarity=0.035 Sum_probs=165.2
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 202 (422)
.+|....|+++++++-|. +..+++++++.|+..++.+++++||+|+++...|...... ++..|+++..++.
T Consensus 60 ~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~--- 134 (395)
T PRK08114 60 GTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP--- 134 (395)
T ss_pred CChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC---
Confidence 556678899999998873 5788888899999999999999999999999899655443 3558999998873
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|.+.++++++ +++|+|++.+|.||+|.+.|.+++.++++. |+++++|.++..... ......+-++++.
T Consensus 135 --~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~GaDivv~ 206 (395)
T PRK08114 135 --LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDFGIDISIQ 206 (395)
T ss_pred --CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHcCCcEEEE
Confidence 47899999997 689999999999999999999999999987 499999999974211 1222446679999
Q ss_pred cChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
|.+|.++.+| .-.|.++.+++..+.+...... ..+++.....+...| +-+. +.++..++...+.+.|++++.+
T Consensus 207 S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl---~TL~lR~~~~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 207 AGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGL---RTLGVRLRQHEESSLKVAEWLAEHPEV 283 (395)
T ss_pred cCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 9999765454 6688788888777766544333 234555544333333 4456 8888999999999999988754
No 245
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.84 E-value=5.2e-18 Score=151.60 Aligned_cols=310 Identities=15% Similarity=0.086 Sum_probs=229.7
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc-c-hHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CC
Q 014594 104 ENPYGPPPEVREALGQLKFPYIYPDP-E-SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCP-PT 179 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~y~~~-~-~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p~ 179 (422)
..|...++.|++|+.....++.-|+. . ..++++-+...|..... -.++...++.+++.++..+++|||.|++.. ..
T Consensus 23 PGPsnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~ 102 (385)
T KOG2862|consen 23 PGPSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGT 102 (385)
T ss_pred CCCcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEech
Confidence 34555678899999875544555654 2 46788888888876444 566777789999999999999999988654 56
Q ss_pred ch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCC
Q 014594 180 FT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 180 y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay 256 (422)
|. .+.+.++..|++|..++.+.+....++.+++.+.++++++++++|....||+..+ .+.+.++++. ++++++|.+-
T Consensus 103 wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va 182 (385)
T KOG2862|consen 103 WGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVA 182 (385)
T ss_pred HHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechh
Confidence 64 6778889999999999988888999999999999899999999999999999999 7888889887 9999999987
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--------------C-----------
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------P----------- 311 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--------------~----------- 311 (422)
+-.+. ....++++.++....-.|++|.|. .++.+.+++...++++..++ +
T Consensus 183 Slggt----~F~mDewgVDvaytgSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yh 257 (385)
T KOG2862|consen 183 SLGGT----EFEMDEWGVDVAYTGSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYH 257 (385)
T ss_pred hcCCc----cceehhhcccEEEecchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccc
Confidence 63221 112335566666666689998532 35668888888888875543 1
Q ss_pred CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcc----cCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594 312 YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNP----YPSYSNFILCEVTSGMDAKKLKDDLAK 384 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~----~p~~~~f~~~~~~~~~~~~~~~~~L~~ 384 (422)
++++....+.+.++|.. ++.++ .+++.+++.+++...|+++|.... .+..-.--.+.+|.+.|..+++.++..
T Consensus 258 hT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~ 337 (385)
T KOG2862|consen 258 HTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMS 337 (385)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHH
Confidence 24556667777777765 45566 899999999999999998763321 111122235778889999999999985
Q ss_pred C-CcEEEeCCCCCCCCeEEEEe-cChhhHHHHHHHH
Q 014594 385 M-GVMIRHYNNKELKGYVRVSV-GKPEHTDALMECL 418 (422)
Q Consensus 385 ~-gI~v~~~~~~~~~~~iRis~-~~~~~~~~l~~al 418 (422)
+ ++.+..+-.+..+..+||.+ +.....+.++..+
T Consensus 338 ~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~ 373 (385)
T KOG2862|consen 338 HYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVV 373 (385)
T ss_pred hcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHH
Confidence 5 66666665577788999995 3333334444443
No 246
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.5e-18 Score=171.08 Aligned_cols=241 Identities=15% Similarity=0.125 Sum_probs=167.9
Q ss_pred CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~ 203 (422)
++....|++.+++++|.+ ..+++++|+.|+..++.+++++||+|+++...|..... .+...|++++.++ +.
T Consensus 68 ~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~-- 142 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP-- 142 (436)
T ss_pred CchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence 556789999999999964 46777888889999999999999999999988865432 2344788888885 21
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S 282 (422)
.|+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|+++..... ... + ..+..+++.|++
T Consensus 143 -~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~p---l-~~GaDivv~S~t 215 (436)
T PRK07812 143 -DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRP---L-EHGADIVVHSAT 215 (436)
T ss_pred -CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCc---h-hcCCCEEEEecc
Confidence 38999999997 789999999999999999999999999987 999999999874221 111 1 234558889999
Q ss_pred hhhccccccceeeecC-HH------------------------------HHHHHH---HhcCCCCCcHHHHHHHHHHccC
Q 014594 283 KRAGLAGLRVGYGAFP-LS------------------------------IIEYLW---RAKQPYNVSVAAEVAACAALQN 328 (422)
Q Consensus 283 K~~~~~G~r~G~i~~~-~~------------------------------~~~~l~---~~~~~~~~~~~~~~aa~~~L~~ 328 (422)
|.+|..|--+|.+++. .. ++.+.. .......+++.....+ ++.
T Consensus 216 K~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~---~rg 292 (436)
T PRK07812 216 KYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI---AQG 292 (436)
T ss_pred cccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH---hcC
Confidence 9987666556665553 11 000111 1111234455443333 333
Q ss_pred ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594 329 PIYLE-VKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLA 383 (422)
Q Consensus 329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~f~~~~~~~~-~~~~~~~~~L~ 383 (422)
-+-+. +.++..++...+.+.|++++.+. .+| ..|..+.+++.++ ..+.+|.+.|.
T Consensus 293 l~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~ 368 (436)
T PRK07812 293 LETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALT 368 (436)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCC
Confidence 34455 88888999999999999887553 233 1245667777532 12445666654
No 247
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.1e-18 Score=172.31 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=156.4
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (422)
+..+...+|+++++++.|.+ ..++++++++|+.+++.+++++||+|+++...|...... +...|++++.++.+
T Consensus 61 ~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 137 (433)
T PRK08134 61 ISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG- 137 (433)
T ss_pred CcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence 34556789999999999964 478899999999999998999999999999999754333 34589999999853
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
|+++++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|.+|...... .. + ..+.++++.|
T Consensus 138 ----d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~p---l-~~GaD~vv~S 207 (433)
T PRK08134 138 ----DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RP---F-EHGADLVYHS 207 (433)
T ss_pred ----CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cc---h-hcCCCEEEec
Confidence 7999999997 789999999999999999999999999987 9999999998742221 11 1 3455699999
Q ss_pred ChhhhccccccceeeecC-HH--------------------------------HHHHHH-HhcC--CCCCcHHHHHHHHH
Q 014594 281 FSKRAGLAGLRVGYGAFP-LS--------------------------------IIEYLW-RAKQ--PYNVSVAAEVAACA 324 (422)
Q Consensus 281 ~SK~~~~~G~r~G~i~~~-~~--------------------------------~~~~l~-~~~~--~~~~~~~~~~aa~~ 324 (422)
.+|.++.+|-.+|.+++. .. +..+.. .... ...+++.....+.
T Consensus 208 ~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~- 286 (433)
T PRK08134 208 ATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLL- 286 (433)
T ss_pred cccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHh-
Confidence 999887677556655442 10 000010 0001 1233444333333
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
..-+.+. +.++..++...+.+.|++++.+
T Consensus 287 --~gL~tl~~R~~~~~~nA~~la~~L~~~p~V 316 (433)
T PRK08134 287 --QGIETLPLRMERHVANTRKVVAFLASHPAV 316 (433)
T ss_pred --cCCCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3323455 7788889999999999987654
No 248
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=1.2e-18 Score=172.40 Aligned_cols=248 Identities=17% Similarity=0.091 Sum_probs=174.1
Q ss_pred cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 129 ~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
+...+|+++++++++.+ ++++++|+++++..++.++ +++||+|+++.|+|..+...+...|++++.++.
T Consensus 63 ~~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv 140 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV 140 (438)
T ss_pred hhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 34689999999999964 7999999999999998876 478999999999999999888899999999986
Q ss_pred C-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEE
Q 014594 200 K-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLI 276 (422)
Q Consensus 200 ~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i 276 (422)
+ .++.+|++.+++.++ +++++|+++|+ +|...+.+++.++++. |++||+|++|+... +.+.....++ .+
T Consensus 141 d~~~~~id~~~le~~i~-~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g----d~ 212 (438)
T PRK15407 141 ELPTYNIDASLLEAAVS-PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG----DI 212 (438)
T ss_pred CCCcCCcCHHHHHHHcC-cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC----ce
Confidence 5 568899999999997 68999998764 7788899999999987 99999999998654 2333333222 25
Q ss_pred EEccC--hhhhccccccceeeecCH-HHHHHHHHhcCC-----------------------------------------C
Q 014594 277 VLRTF--SKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-----------------------------------------Y 312 (422)
Q Consensus 277 ~~~S~--SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~-----------------------------------------~ 312 (422)
.+.|| +|.+. .|- .|+++++. ++.+.+...... +
T Consensus 213 ~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~ 290 (438)
T PRK15407 213 ATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL 290 (438)
T ss_pred EEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence 66677 46664 343 58888864 454444322110 1
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Ccc--cCCCc---eEE-EEEeCC--CCCHHHHHHHH
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNP--YPSYS---NFI-LCEVTS--GMDAKKLKDDL 382 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~--~p~~~---~f~-~~~~~~--~~~~~~~~~~L 382 (422)
.++.+..+.+...|+ .++ ..++-+++.+++.+.|.+++. +.. .+.+. .|. .+.+++ +.+.+++.+.|
T Consensus 291 rmsel~AAig~~qL~---~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L 367 (438)
T PRK15407 291 KITDMQAAIGLAQLE---KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYL 367 (438)
T ss_pred CccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHH
Confidence 122233333333332 233 555666777778888877652 221 12222 222 244432 35689999999
Q ss_pred HhCCcEEEe
Q 014594 383 AKMGVMIRH 391 (422)
Q Consensus 383 ~~~gI~v~~ 391 (422)
.++||..+.
T Consensus 368 ~~~GI~~~~ 376 (438)
T PRK15407 368 EENKIGTRL 376 (438)
T ss_pred HHCCCCccc
Confidence 999998764
No 249
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.8e-18 Score=159.37 Aligned_cols=308 Identities=17% Similarity=0.185 Sum_probs=215.1
Q ss_pred CCCCCCCCHHHHHHHhcCC--CCCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 103 NENPYGPPPEVREALGQLK--FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~--~~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
++|.-++.|+++++|.+.. ....|++ +....+++.+++.+|. +.+++++++|++..+++.+.++||+.|++..-.
T Consensus 6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a 83 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA 83 (342)
T ss_pred cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence 3666778899999998754 3367854 4578999999999996 789999999999999999999999999998887
Q ss_pred chhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594 180 FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (422)
Q Consensus 180 y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~ 247 (422)
|.... ......++..+.+....+..+++++++..+..+ .+.++++.+.+|.-|.++|+++|++|.+. |
T Consensus 84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~ 163 (342)
T COG2008 84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG 163 (342)
T ss_pred cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence 74221 122223444444444466789999999987532 34555556666688999999999998775 9
Q ss_pred CeEEEccCCcccc--CCCchhhhhhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCC----CCCcHHHHH
Q 014594 248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP----YNVSVAAEV 320 (422)
Q Consensus 248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~----~~~~~~~~~ 320 (422)
+.|.+|.+-.... ..+.....+..+- +++..++||..+.++ |. ++++.++++++...+.. +.-..+..+
T Consensus 164 l~LHmDGAR~~nA~valg~~~~~~~~~~-D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA 239 (342)
T COG2008 164 LPLHMDGARLANALVALGVALKTIKSYV-DSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA 239 (342)
T ss_pred CceeechHHHHHHHHHcCCCHHHHHhhC-CEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence 9999999865322 1122333333332 355557899877665 54 55699999988765543 455677888
Q ss_pred HHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCC-
Q 014594 321 AACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELK- 398 (422)
Q Consensus 321 aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~- 398 (422)
+...+|++.-|...-.+-.++.++|.+.|+..++.. ..|..+|.+++++++ ...+.|...|+....+-.....
T Consensus 240 ~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~-----~~i~~l~~~~~~~~~~~~~~~~~ 314 (342)
T COG2008 240 QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE-----SAIEALRLAGALFYRGVLIGAHG 314 (342)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh-----HHHHHHHhhchhheeeeeccCCC
Confidence 888999988887655566667999999999765555 456899999999973 2225555555444432211111
Q ss_pred CeEEEEec---ChhhHHHHHHHHhhh
Q 014594 399 GYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 399 ~~iRis~~---~~~~~~~l~~al~~l 421 (422)
..+|+..+ +.++++++...++.+
T Consensus 315 ~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 315 EIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred ceEEEEeeccCCHHHHHHHHHHHHHh
Confidence 47999876 345566666666543
No 250
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=2.5e-18 Score=163.27 Aligned_cols=264 Identities=19% Similarity=0.229 Sum_probs=186.7
Q ss_pred HHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH
Q 014594 111 PEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA 188 (422)
Q Consensus 111 ~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~ 188 (422)
.+..+++.+. ..++.-+.+...++++++++++|+ .+.+.++++|.|+.++++++ +.|||+|++++-+|........
T Consensus 15 ~~e~~~v~~vl~sg~i~~G~~v~~FE~~~ae~~G~--k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~ 92 (374)
T COG0399 15 EEELAAVQEVLKSGWLTGGPFVRRFEQAFAEYLGV--KYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVL 92 (374)
T ss_pred hHHHHHHHHHHHcCCeecChHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHH
Confidence 4445556553 322222334578999999999996 58999999999999999966 6999999999999999999999
Q ss_pred HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCch
Q 014594 189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR 265 (422)
Q Consensus 189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~ 265 (422)
..|++++.++.+ +.+.+|++.+|++|+ +++|+|+ |-+--|...+.+.|.+|++. |++||+|.+++..+ +.+..
T Consensus 93 ~~Ga~PVFvDid~~T~nid~~~ie~aIt-~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~ 168 (374)
T COG0399 93 LVGAKPVFVDIDPDTLNIDPDLIEAAIT-PRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKK 168 (374)
T ss_pred HcCCeEEEEecCCcccCCCHHHHHHHcc-cCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcc
Confidence 999999999976 568999999999998 6899999 55668999999999999998 99999999998655 44444
Q ss_pred hhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC------------------CCCcHHHHHHHHH
Q 014594 266 MEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------YNVSVAAEVAACA 324 (422)
Q Consensus 266 ~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------~~~~~~~~~aa~~ 324 (422)
...+++ +.+.|| +|.+. .| -.|.++.+ +++.++++..+.. +.++.+.++....
T Consensus 169 vGt~Gd----~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~ 242 (374)
T COG0399 169 VGSFGD----IGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLA 242 (374)
T ss_pred cccccc----eEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHH
Confidence 444432 666677 68886 45 56888874 5677776643211 1223333333334
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cCCCc---eEE-EEEeCC-CCCHHHHHHHHHhCCcEE
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YPSYS---NFI-LCEVTS-GMDAKKLKDDLAKMGVMI 389 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~---~f~-~~~~~~-~~~~~~~~~~L~~~gI~v 389 (422)
.|+. ++ ..++-++..+...+.|++++.+.. .+... .++ .+.+++ +.+.+.+.+.|.++||..
T Consensus 243 QL~~---l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~ 312 (374)
T COG0399 243 QLER---LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGA 312 (374)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCc
Confidence 4433 22 444445556666677776653332 22222 222 244543 367889999999987664
No 251
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=2e-18 Score=172.34 Aligned_cols=322 Identities=16% Similarity=0.116 Sum_probs=191.8
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~ 160 (422)
+.+++.+||+..+... + ..+|.+.+++.+ +.... .+..+...+|.+.|++..+... +.++++++|++|++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e 129 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE 129 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence 4567889999887432 3 357888888876 32211 1223345677788887775322 58999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC----CCCC--------HHHHHH
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD----FSLN--------VELIAD 212 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~----~~~d--------~~~l~~ 212 (422)
.+++.-. ....+|+....+|++....+.. .|. .+..+|.... .+.. ++.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 9999432 2236788889889765544332 121 1222332110 1111 123333
Q ss_pred Hh----hcCCCeEEEEeCCCCccCcCCC-HHHHHHHH---cC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccC
Q 014594 213 AV----EREKPKCIFLTSPNNPDGSIIN-DEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF 281 (422)
Q Consensus 213 ~i----~~~~~~~i~l~~p~NPtG~~~~-~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~ 281 (422)
.+ ..+++.+|++...+.-.|.+++ .+.+++|. +. |+++|+||+|.+|...+... ...+..++ +.||
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD---i~t~ 286 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD---LITV 286 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC---EEee
Confidence 33 2245667776644444576554 34355554 44 99999999999886544322 22221222 4489
Q ss_pred hhhhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKD----V 352 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~----~ 352 (422)
||.++ +|+|+||+++++++++.+.... ..++.+++.+.++.++|+ ++. ..++.++..+++.+.|++ +
T Consensus 287 sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~ 362 (451)
T PRK06918 287 SKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKY 362 (451)
T ss_pred ehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhC
Confidence 99998 8999999999999988775333 347889999999777774 233 333344444444444433 3
Q ss_pred CCCc-ccCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 353 PFLN-PYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 353 ~~~~-~~p~~~~f~~~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+. +.+.++++.|.... +......+.+.+.++||.+.++..+ .+++||+++...+.+++++++++|
T Consensus 363 ~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l 437 (451)
T PRK06918 363 NCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTII 437 (451)
T ss_pred CCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence 4322 33444444443321 1112456777778999999986533 478999986422235566665554
No 252
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.83 E-value=3.5e-18 Score=167.00 Aligned_cols=300 Identities=11% Similarity=0.059 Sum_probs=201.8
Q ss_pred CCCCCCCHH-HHHHHhcCCC--CCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeC-CHHHHHHHHHHHhcCC-CCEEEE
Q 014594 104 ENPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVD 175 (422)
Q Consensus 104 ~~~~~~~~~-v~~al~~~~~--~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~-G~~~al~~~~~~l~~~-gd~Vl~ 175 (422)
..|...+|. |++++..... .++-+.. -..+.|+.++++++.+ +++|+++. |+|.+++.++..++++ ++.|+.
T Consensus 18 ~Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~ 97 (378)
T PRK03080 18 SGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA 97 (378)
T ss_pred CCCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence 345556677 9999876322 2333333 2678999999999984 45788875 8999999999999875 444444
Q ss_pred cCCCchh-HHH-HHHHcCC-EEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEE
Q 014594 176 CPPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVL 252 (422)
Q Consensus 176 ~~p~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~ 252 (422)
.-.|+. +.. .++..|+ ++..++.+++..+|+++++ .++.|.++|.+|.||...|.+++.+ .+.|+++++
T Consensus 98 -~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~------~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vV 169 (378)
T PRK03080 98 -WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD------FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTIC 169 (378)
T ss_pred -eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC------CCCCEEEEecCCccceeccchhhcc-ccCCCeEEE
Confidence 456653 222 2356788 8888887667678877632 2567899999999999999999988 334999999
Q ss_pred ccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHhc----------------------
Q 014594 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAK---------------------- 309 (422)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~---------------------- 309 (422)
|.+++.....-. ... -++++.|..|.++. +| +|+++++++.++++....
T Consensus 170 Da~qs~G~~pid-v~~-----iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 241 (378)
T PRK03080 170 DATSAAFALPLD-WSK-----LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSF 241 (378)
T ss_pred ecccccccCCCC-HHH-----CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhh
Confidence 999885432211 111 24888899998753 45 899999998887765311
Q ss_pred C---CCCCcHHHHHHHHHHc---cCChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CC--CceEEEEEeCC---CCC
Q 014594 310 Q---PYNVSVAAEVAACAAL---QNPIYLE-VKEALIKERERLFKLLKDVPFLNPY---PS--YSNFILCEVTS---GMD 374 (422)
Q Consensus 310 ~---~~~~~~~~~~aa~~~L---~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~--~~~f~~~~~~~---~~~ 374 (422)
. +++++.....++.++| .+...++ +.++.++..+++++.|++++++.+. +. .+..+.+++++ +.
T Consensus 242 ~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~- 320 (378)
T PRK03080 242 KGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAV- 320 (378)
T ss_pred cCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHH-
Confidence 0 1223444443333343 3331345 8889999999999999998865433 11 22355667764 22
Q ss_pred HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 375 AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
..++...|.++||.++.+......+.+|||+. +.++++.+.++|+.
T Consensus 321 ~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 321 DAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred HHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 33466777777998887543223579999975 45677777777764
No 253
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.83 E-value=1.3e-18 Score=168.54 Aligned_cols=302 Identities=15% Similarity=0.076 Sum_probs=199.5
Q ss_pred CCCCCCCCHHHHHHHhcCC-----CC-------CCCCCc--chHHHHHHHHHHcCC-CCCCEEEeCC-HHHHHHHHHHHh
Q 014594 103 NENPYGPPPEVREALGQLK-----FP-------YIYPDP--ESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCV 166 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~-----~~-------~~y~~~--~~~~lr~~la~~~~~-~~~~i~~~~G-~~~al~~~~~~l 166 (422)
+..|...|++|++++.+.- .+ ++-+.. -..+.|+.++++++. ++++|++|+| +|++++.++..+
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 3456677899999987621 11 111111 256889999999997 5678999988 999999999999
Q ss_pred cC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCC-C-HHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 167 LD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 167 ~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~-d-~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
+. +||.|++ .+........++..|+++..++.+++... + ++..+..++ +++++|.++|.+|.||...+
T Consensus 84 ~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~----- 156 (355)
T cd00611 84 LGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD----- 156 (355)
T ss_pred CCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----
Confidence 87 4444443 33223344467788999888886433222 4 233333444 78999999999999999843
Q ss_pred HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------c----
Q 014594 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------K---- 309 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------~---- 309 (422)
++++. |+++++|.+++.....- .+...+ +.+.|..|.+|.+| +|++++++++++++... .
T Consensus 157 ~i~~~~g~~~~VDa~qs~g~~~i----dv~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (355)
T cd00611 157 EVPDTGGVPLVADMSSNILSRPI----DVSKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHAD 228 (355)
T ss_pred eecccCCCeEEEEccccccCCCC----CHHHhC--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHh
Confidence 45554 99999999998543211 111222 45566799998777 79999999888764321 0
Q ss_pred ---CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCc-c-cC--CCc-eEEEEEeCCCCCHHH
Q 014594 310 ---QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLN-P-YP--SYS-NFILCEVTSGMDAKK 377 (422)
Q Consensus 310 ---~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~-~p--~~~-~f~~~~~~~~~~~~~ 377 (422)
..+++|.....++.++|+. ...++ +.++.++..+++++.|++++++. . .+ ... ..+.+.+++....++
T Consensus 229 ~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~ 308 (355)
T cd00611 229 NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKE 308 (355)
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHH
Confidence 1245666666666666553 31345 88999999999999999984432 1 11 122 335666653211255
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+.+.+.++|+.+..+.. ..+.+|+|+. +.+|+|+|.++|+.+
T Consensus 309 ~~~~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 309 FLKEAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHHHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 55677789997444432 3478999975 577888888888875
No 254
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=6e-18 Score=167.13 Aligned_cols=322 Identities=15% Similarity=0.126 Sum_probs=201.0
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.++|+..+.. .+ ..+|++.+++.+ +... ..++.+...++-+.+++..+-. .+.+++++++++|++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e 115 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE 115 (425)
T ss_pred eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 456788999987742 23 357888888876 3211 1234444567788888877532 268999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CCCC----HHHHHHHhh----
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSLN----VELIADAVE---- 215 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~d----~~~l~~~i~---- 215 (422)
.+++.-. ....+|+....+|++....+.. .|. .++.+|.+.. .+.+ ++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~ 195 (425)
T PRK07495 116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD 195 (425)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence 9998432 2236799888888765433221 111 1233332211 1222 445566653
Q ss_pred cCCCeEEEEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594 216 REKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (422)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 290 (422)
.+++++|++.....-+|. ..+.+.+++|.+. |+++|+||+|..|...+.. ......+....+.+|||.++ +|+
T Consensus 196 ~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv~pDi~tlsK~l~-~G~ 273 (425)
T PRK07495 196 PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEVAADLTTMAKGLA-GGF 273 (425)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCCCCCEEeehhhhc-CCc
Confidence 246788888844433884 4677666666543 9999999999987654432 11222334455778999998 899
Q ss_pred cceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCC
Q 014594 291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSY 361 (422)
Q Consensus 291 r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~ 361 (422)
++|++++++++.+.+... ...|+.+++.++++.++|+ +++ ..++.++..+++.+.|++ ++.+.-....
T Consensus 274 pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~ 350 (425)
T PRK07495 274 PLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRGP 350 (425)
T ss_pred cceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC
Confidence 999999999998876532 2457789999987777664 233 334444445555444443 4433323456
Q ss_pred ceEEEEEeCCCC----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014594 362 SNFILCEVTSGM----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 362 ~~f~~~~~~~~~----~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
|.++|+++.+.. + ...+.+.+.++|+++..... .++.+||.....-+.+++.++++
T Consensus 351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~ 413 (425)
T PRK07495 351 GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALD 413 (425)
T ss_pred ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHH
Confidence 899999884321 1 34577778899999976432 24789999653222233444443
No 255
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=7e-18 Score=168.54 Aligned_cols=320 Identities=14% Similarity=0.071 Sum_probs=210.5
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---hHH----HHHHHHHHcCCCCCCEEEe---CCHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---SRR----LRAALAKDSGLESDHILVG---CGADE 157 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~~~----lr~~la~~~~~~~~~i~~~---~G~~~ 157 (422)
.+.|+|-..+|.. +|.+++++.. +. +..++|.. | ... .|+.++++++.+++++.++ +|+++
T Consensus 34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~ 111 (452)
T PTZ00094 34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP 111 (452)
T ss_pred HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence 4569999999877 5788888876 22 21133311 1 122 4668899999988887677 78999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----------cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
++..++.+++++||+|++....|......+.. .+.+++.++.+.+..+|++++++.+++.+++++++.
T Consensus 112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~-- 189 (452)
T PTZ00094 112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG-- 189 (452)
T ss_pred HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence 99999999999999999987777544322210 112344455555578999999999975578877754
Q ss_pred CCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~ 306 (422)
++.+|...|.+++.++++. |+++++|++|........... .+..+.++++.|++|.++ |-+.|++++++++.+.+.
T Consensus 190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~-~~~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~ 266 (452)
T PTZ00094 190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP-SPFPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIE 266 (452)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC-CCCCCCcEEEcCCccCCC--CCCceEEEEecccchHHH
Confidence 3449999999999999987 999999999985432211111 011145588999999653 333588888766544332
Q ss_pred Hhc----CCC---CCcHHHHHHHHHHccCC---hHHHHHHHHHHHHHHHHHHHccCCCCcccCC-CceEEEEEeC-CCCC
Q 014594 307 RAK----QPY---NVSVAAEVAACAALQNP---IYLEVKEALIKERERLFKLLKDVPFLNPYPS-YSNFILCEVT-SGMD 374 (422)
Q Consensus 307 ~~~----~~~---~~~~~~~~aa~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f~~~~~~-~~~~ 374 (422)
... .+. +.+....+++.++++.- ++.+.++++.++++++.+.|++.++....+. ....+.+.+. .+.+
T Consensus 267 ~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~~~ 346 (452)
T PTZ00094 267 NKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGIT 346 (452)
T ss_pred HhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCCCC
Confidence 221 111 44555555555555532 2223778899999999999987653222221 1223444443 2567
Q ss_pred HHHHHHHHHhCCcEEE-eCCC----CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014594 375 AKKLKDDLAKMGVMIR-HYNN----KELKGYVRVSVG-------KPEHTDALMECLMHL 421 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~-~~~~----~~~~~~iRis~~-------~~~~~~~l~~al~~l 421 (422)
...+...|.++||.+. .+.. ...++++|+++. +.++++++.++|+++
T Consensus 347 ~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~ 405 (452)
T PTZ00094 347 GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA 405 (452)
T ss_pred HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 8888888988999995 2221 123579999973 267788888887653
No 256
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.82 E-value=1.5e-18 Score=163.92 Aligned_cols=199 Identities=19% Similarity=0.168 Sum_probs=157.4
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcCC-C----C-CC-CC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQLK-F----P-YI-YP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~-~----~-~~-y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.+.+.+.|+.+... +.++.|.+++.... . . .. |. ..+.++-|+.+|++.+.++.+|++|+|+|++++++
T Consensus 40 ~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred CCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 44567888876532 34688999987631 1 1 12 22 12367899999999999999999999999999999
Q ss_pred HHHhc-CCCC----EEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 163 MRCVL-DPGD----KIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 163 ~~~l~-~~gd----~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
++.+. ..+| .|++..-.|..... ..+..|.+++.+|.+++...|.+.+++.++ ++|+++.+.+.+|.+|++
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence 99873 3456 89988888864443 344479999999988888899999999998 799999999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
.|.+||.++++. ++.+++|.+++- +...-.+.+-+.+++..|.+|.||.+| +|++++++
T Consensus 198 ~Pv~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 198 QPVKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred ccHHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence 999999999998 999999999983 223333334455677888999999999 99999876
No 257
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.82 E-value=2.8e-18 Score=166.11 Aligned_cols=303 Identities=15% Similarity=0.080 Sum_probs=208.5
Q ss_pred CCCCCCCCHHHHHHHhcCC------------CCCCCCCc--chHHHHHHHHHHcCCC-CCCEE-EeCCHHHHHHHHHHHh
Q 014594 103 NENPYGPPPEVREALGQLK------------FPYIYPDP--ESRRLRAALAKDSGLE-SDHIL-VGCGADELIDLIMRCV 166 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~------------~~~~y~~~--~~~~lr~~la~~~~~~-~~~i~-~~~G~~~al~~~~~~l 166 (422)
+..|...|++|++++.... .+++-++. -..+.++.++++++.+ ..+++ ++++++.+++.++..+
T Consensus 8 ~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl 87 (360)
T PRK05355 8 SAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNL 87 (360)
T ss_pred cCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhc
Confidence 3456667899999987631 11222222 2568999999999973 33454 5577899999999999
Q ss_pred cCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCCC-CCCCCHHHHHH-HhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 167 LDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+.+||++++...+.. .+...++..|.. ..+..++ ....+..++++ .++ .++++|.++|..|.||...+ .+.+
T Consensus 88 ~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~ 163 (360)
T PRK05355 88 LGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPD 163 (360)
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--cccc
Confidence 999998876665543 456677888865 5554332 22344444444 665 57999999999999999994 2334
Q ss_pred HHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--------------
Q 014594 243 ILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------- 308 (422)
Q Consensus 243 i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------------- 308 (422)
| .|+++|+|.+.+.....- . ++..+ +++.|..|.+|.+| +|++++++++++++...
T Consensus 164 i--~g~l~vVDavss~g~~~i-d---v~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 233 (360)
T PRK05355 164 T--GDVPLVADMSSDILSRPI-D---VSKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADND 233 (360)
T ss_pred c--CCCcEEEEcCccccCccC-C---HHHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcC
Confidence 4 599999999988543211 1 12223 78888899998776 79999999888765431
Q ss_pred cCCCCCcHHHHHHHHHHccC--Ch-HHH-HHHHHHHHHHHHHHHHccCCCCccc-C--CCc-eEEEEEeCCCCCHHHHHH
Q 014594 309 KQPYNVSVAAEVAACAALQN--PI-YLE-VKEALIKERERLFKLLKDVPFLNPY-P--SYS-NFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~--~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p--~~~-~f~~~~~~~~~~~~~~~~ 380 (422)
..++++|.....++.++|+. .+ .++ +.++.++..+++++.|+++++.... + ... .-+.+.+|++.+..++.+
T Consensus 234 ~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~ 313 (360)
T PRK05355 234 SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLA 313 (360)
T ss_pred CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHH
Confidence 11356777777777766663 22 356 9999999999999999999854321 1 123 346677775544567777
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+.++|+.+..+.. ..+.+|+|+. +.+|++.|.++|+.+
T Consensus 314 ~~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~ 355 (360)
T PRK05355 314 EAKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEF 355 (360)
T ss_pred HHHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHH
Confidence 88889999855432 3478999975 467788888888764
No 258
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.82 E-value=7.1e-18 Score=178.96 Aligned_cols=319 Identities=14% Similarity=0.085 Sum_probs=210.7
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC-C--C--CC-CCCC-----cchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQL-K--F--PY-IYPD-----PESRRLRAALAKDSGLESD--HILVGCGADELIDLIM 163 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~--~--~~-~y~~-----~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~ 163 (422)
++.|+.+.....++..+.+++.+. . . .+ .|.. .-..+.|+.+++++|++++ .|++|+|+|++++++.
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva 114 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG 114 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence 689999876655555666665442 1 1 11 1211 1256899999999999765 4899999999999999
Q ss_pred HHh-cCCCCEEEEcCCCchh---HHHHHHHcCCEEEEecCC--------CCCCCCH--HHHHHHhh---------cCCCe
Q 014594 164 RCV-LDPGDKIVDCPPTFTM---YEFDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKPK 220 (422)
Q Consensus 164 ~~l-~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~--------~~~~~d~--~~l~~~i~---------~~~~~ 220 (422)
..+ +++||+|++..-.|.. ....++..|+++..++.+ ....+++ +.+++.++ ..+++
T Consensus 115 ~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~ 194 (805)
T PLN02724 115 ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN 194 (805)
T ss_pred HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence 987 6889999997766753 233445579999888854 2223333 55666531 14568
Q ss_pred EEEEeCCCCccCcCCCHHHHHHHHcC---------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccc
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i~~~---------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r 291 (422)
+|.+++.+|.||.++|.+.+.++.+. ++++++|.++.... ..-.+...+-++++.|+.|.+|.| ..
T Consensus 195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~----~piDv~~~~~Dfl~~S~HK~~GgP-~G 269 (805)
T PLN02724 195 LFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT----SPPDLSRYPADFVVVSFYKIFGYP-TG 269 (805)
T ss_pred eEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC----CCCChhhcCCCEEEEecceeccCC-CC
Confidence 99999999999999999988766663 25799999987322 111223345568899999987722 23
Q ss_pred ceeeecCHHHHHHHHHhc--------------------------CCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHH
Q 014594 292 VGYGAFPLSIIEYLWRAK--------------------------QPYNVSVAAEVAACAALQN---PIYLEVKEALIKER 342 (422)
Q Consensus 292 ~G~i~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~ 342 (422)
+|++++++++.+.+.... ...++|..+..++.++++. -.+..+.++.++..
T Consensus 270 ~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~ 349 (805)
T PLN02724 270 LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALT 349 (805)
T ss_pred ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 899999888776554211 1124455555555555543 22222778889999
Q ss_pred HHHHHHHccCC------CCcccCC---------CceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCC--------
Q 014594 343 ERLFKLLKDVP------FLNPYPS---------YSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNK-------- 395 (422)
Q Consensus 343 ~~l~~~L~~~~------~~~~~p~---------~~~f~~~~~~~----~~~~~~~~~~L~~~gI~v~~~~~~-------- 395 (422)
+++.+.|++++ .+.++.. .+..+.+.+.. .....++...+.++||.++.|...
T Consensus 350 ~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~ 429 (805)
T PLN02724 350 HYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKY 429 (805)
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHH
Confidence 99999998875 3444421 23455555542 123444555455889999966541
Q ss_pred --------------------------C-CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 396 --------------------------E-LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 396 --------------------------~-~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+ ..+.+|+|++ +.+|+|.|.++|++
T Consensus 430 lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 430 LGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred cCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 0 1288999986 56778888888875
No 259
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=1.5e-17 Score=164.98 Aligned_cols=321 Identities=14% Similarity=0.175 Sum_probs=201.6
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.++|+..+. ..+ ..+|++.+++.+ +.. .. .|+.+...+|.+.|++..+...+.+++++++++|++.
T Consensus 38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 117 (423)
T PRK05964 38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV 117 (423)
T ss_pred eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34678899998773 333 357888888875 221 11 2444445678888888775334689999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC--CCCCHHHHHHHhhc--
Q 014594 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD--FSLNVELIADAVER-- 216 (422)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~--~~~d~~~l~~~i~~-- 216 (422)
+++.... +| .+|+....+|++....+.. .+- .+..++...+ ...+++.+++.+.+
T Consensus 118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~ 197 (423)
T PRK05964 118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA 197 (423)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence 9995321 23 6799999989765443322 111 1122222111 01127888888853
Q ss_pred CCCeEEEEeC-CCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594 217 EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (422)
Q Consensus 217 ~~~~~i~l~~-p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 290 (422)
+++.+|++.. .++..|... +.+.+.+| |+. |+++|+||+|.+|...+..... ...+...-+.+++|.++.+++
T Consensus 198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~ 276 (423)
T PRK05964 198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL 276 (423)
T ss_pred CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence 4566787775 577788777 55555554 554 9999999999887544422111 111211223467899974448
Q ss_pred cceeeecCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccC---CCCc
Q 014594 291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDV---PFLN 356 (422)
Q Consensus 291 r~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~ 356 (422)
++|++++++++.+.+... ..+|+.++++..++.++|+ .+++. ++..+.-+++.+.|+++ +.+.
T Consensus 277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~l~~~~~i~ 353 (423)
T PRK05964 277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVL---ERVAALSAGLAEGLEPFRDLPGVA 353 (423)
T ss_pred cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhhccCCCeE
Confidence 999999999999887531 1235678888888888876 23444 44444455555555443 3332
Q ss_pred ccCCCceEEEEEeCCCC---CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 357 PYPSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 357 ~~p~~~~f~~~~~~~~~---~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.....|.++.+.+.+.. ....+.+.|.++||.+.+.. +.+||+.. +.+++|++.+++++
T Consensus 354 ~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----~~lR~~p~l~~t~edId~~v~~l~~ 418 (423)
T PRK05964 354 DVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG-----NTIYLMPPYIITAEELDRITDAIVE 418 (423)
T ss_pred EeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHH
Confidence 23456777778875322 25678888999999998753 58999965 45556666655543
No 260
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=9e-18 Score=149.21 Aligned_cols=310 Identities=19% Similarity=0.201 Sum_probs=214.5
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
..+||-+. .-..|..+++++|.+...+ ..| .|+...+|++..|+.+| ++.-+++++|++..+-.++.-+-++|.+|
T Consensus 22 ~~vDLRSD-TvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~ei 99 (384)
T KOG1368|consen 22 RSVDLRSD-TVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEI 99 (384)
T ss_pred eccccccc-cccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceE
Confidence 34666553 3334568899999885432 557 45678999999999999 44567777776665555554445599999
Q ss_pred EEcCCCch-hHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CCCeEEEEeCCCCccC-cCCCHHHHHH
Q 014594 174 VDCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLK 242 (422)
Q Consensus 174 l~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~l~~p~NPtG-~~~~~e~l~~ 242 (422)
++-.-+|- .|+ .++...|+.+.++..+++..+|++++|+++.. +.+++|++.|-+|-+| .++|+|++.+
T Consensus 100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~ 179 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDR 179 (384)
T ss_pred EeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHH
Confidence 99988773 343 34556899999999888889999999999863 3489999998877776 9999999888
Q ss_pred HHcC----CCeEEEccCCccccC--CCchhhh-hhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCC---
Q 014594 243 ILEM----PILVVLDEAYTEFSG--LESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP--- 311 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~--~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~--- 311 (422)
+..+ |+-+.+|.+-..-+. .+-+... ....+.+ --.+||.+|.| +|- ++++.+++++....+..
T Consensus 180 v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSV--siCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGG 254 (384)
T KOG1368|consen 180 VKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSV--SICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGG 254 (384)
T ss_pred HHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhh--hhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcC
Confidence 7654 999999998764321 1111221 1112222 22478987744 675 45689999988766544
Q ss_pred -CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014594 312 -YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVT-SGMDAKKLKDDLAKMGV 387 (422)
Q Consensus 312 -~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI 387 (422)
+..+....+|+..+|++. |. ..+.-+++...+.+.++..+.+.+ ...+.|++.+.+. ...+++++++.+.++||
T Consensus 255 GmRQsGvLaaaaLval~~~-~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi 332 (384)
T KOG1368|consen 255 GMRQSGVLAAAALVALDEN-VP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGI 332 (384)
T ss_pred chhHHHHHHHHHHHHhhcc-hH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCe
Confidence 334555666666666542 22 334455667777788877765543 3367888887664 36799999999999999
Q ss_pred EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 388 MIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 388 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
.+..+.. ..+||.+- ++++.|.+..++
T Consensus 333 ~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 333 LLMGGAS----RRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred EEeeccc----cceEEEEEEecCHHHHHHHHHHH
Confidence 9999873 55899985 455556666655
No 261
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.5e-17 Score=148.54 Aligned_cols=286 Identities=15% Similarity=0.208 Sum_probs=205.0
Q ss_pred CCCCC-CCcchHHHHHHHHHHc-C-----CCCCCE--EEeCCHHHHHHHHHHH---hcCCCCEEEEcCCCchhHHHHHHH
Q 014594 122 FPYIY-PDPESRRLRAALAKDS-G-----LESDHI--LVGCGADELIDLIMRC---VLDPGDKIVDCPPTFTMYEFDAAV 189 (422)
Q Consensus 122 ~~~~y-~~~~~~~lr~~la~~~-~-----~~~~~i--~~~~G~~~al~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~ 189 (422)
..+.| |..|.+.++++.++.. | +.++++ +-+-++|.|+.+.... ++. ...|.+++|+|.....+++.
T Consensus 66 ~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~ 144 (410)
T KOG1412|consen 66 LNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEK 144 (410)
T ss_pred ccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHH
Confidence 44678 7789999999888874 3 234443 3344566666665553 344 46799999999999999999
Q ss_pred cC-CEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEe-C-CCCccCcCCCHHHHHHHHcC----CCeEEEccCCcccc
Q 014594 190 NG-AAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLT-S-PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS 260 (422)
Q Consensus 190 ~g-~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~-~-p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~ 260 (422)
.| .++..++ ..++-.+|++.+...++....+.|++. . .+||||.-.+.|++.+|++. +.+.+.|-+|.+|+
T Consensus 145 aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfA 224 (410)
T KOG1412|consen 145 AGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFA 224 (410)
T ss_pred cCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccc
Confidence 99 4455555 234457999999999875444444444 3 38999999999999999985 89999999999998
Q ss_pred CCCch-----hh-hhhcCCcEEEEccChhhhccccccceeeec---CHHHHHHH----HHhc--CCCCCcHHHHHHHHHH
Q 014594 261 GLESR-----ME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSIIEYL----WRAK--QPYNVSVAAEVAACAA 325 (422)
Q Consensus 261 ~~~~~-----~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~~~~~~l----~~~~--~~~~~~~~~~~aa~~~ 325 (422)
.++.. +. .+......+++.||+|.||+.+.|+|.+.. ++..+..+ .... ...+++..+...+...
T Consensus 225 SGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kv 304 (410)
T KOG1412|consen 225 SGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKV 304 (410)
T ss_pred cCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHH
Confidence 54321 12 233445589999999999999999997664 45544433 2222 2356777888999999
Q ss_pred ccCC----hHHH----HHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC
Q 014594 326 LQNP----IYLE----VKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN 393 (422)
Q Consensus 326 L~~~----~~~~----~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~ 393 (422)
|+.+ +|.+ +..+++++|..|++.|..++ |.++..+.|+|-+- |.+...+-....++.|++..-+
T Consensus 305 L~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT----GLtp~qV~~li~~h~vyLl~~G 380 (410)
T KOG1412|consen 305 LSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT----GLTPAQVDHLIENHKVYLLSDG 380 (410)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec----CCCHHHHHHHHHhceEEEecCC
Confidence 9975 4544 66789999999999998874 33456677888764 4466666555558899998766
Q ss_pred CCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594 394 NKELKGYVRVSVGK--PEHTDALMECLMH 420 (422)
Q Consensus 394 ~~~~~~~iRis~~~--~~~~~~l~~al~~ 420 (422)
||+++. ....|.+.+++..
T Consensus 381 --------RInisGLN~~NveyVAkAIde 401 (410)
T KOG1412|consen 381 --------RINISGLNMKNVEYVAKAIDE 401 (410)
T ss_pred --------cEeeeccccccHHHHHHHHHH
Confidence 888863 4456777777654
No 262
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.81 E-value=4.5e-18 Score=164.52 Aligned_cols=277 Identities=22% Similarity=0.256 Sum_probs=185.8
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~ 201 (422)
+.+|....|+++|+++.|. +.++++++|+.|+..++.+++++||.|+++...|......++ ..|+++..++.
T Consensus 52 ~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-- 127 (386)
T PF01053_consen 52 YGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-- 127 (386)
T ss_dssp TC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST--
T ss_pred cccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc--
Confidence 3556678899999999985 679999999999999999999999999999999976554443 47999988863
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-CeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
-|+++++++++ +++++|++.+|.||+..+.+.+.+.++++. | +++|+|..+.....- .++ ..+.++++.
T Consensus 128 ---~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv~ 198 (386)
T PF01053_consen 128 ---TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVVH 198 (386)
T ss_dssp ---TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEEE
T ss_pred ---hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEEe
Confidence 47999999998 699999999999999999999999999997 7 999999999743221 111 234459999
Q ss_pred cChhhhcccc-ccceeeecC--HHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~--~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
|.+|.++..| .=.|.++++ .++.+.++.....+ .+++.....+..-|+ -+. +.++..++...+.+.|++.+
T Consensus 199 S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---Tl~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 199 SATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---TLPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp ETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTST
T ss_pred eccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999775333 336777765 47777776554433 345555554444443 344 78888999999999999987
Q ss_pred CCc-c-cC----------------CCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCC--------------------
Q 014594 354 FLN-P-YP----------------SYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNN-------------------- 394 (422)
Q Consensus 354 ~~~-~-~p----------------~~~~f~~~~~~~~~-~~~~~~~~L~~~gI~v~~~~~-------------------- 394 (422)
.+. + +| ..+..+.+++.++. ....|.+.|.--++.+..|+.
T Consensus 276 ~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~ 355 (386)
T PF01053_consen 276 KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEER 355 (386)
T ss_dssp TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHH
T ss_pred CCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhh
Confidence 553 2 34 23457788886433 345555555311111111111
Q ss_pred ---CCCCCeEEEEecChhhHHHHHHHHh
Q 014594 395 ---KELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 395 ---~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
.-.++.||||++.+. .++|.+-|+
T Consensus 356 ~~~Gi~~~liRlSvGlEd-~~dLi~Dl~ 382 (386)
T PF01053_consen 356 AEAGISDGLIRLSVGLED-PDDLIADLE 382 (386)
T ss_dssp HHTTS-TTEEEEE--SS--HHHHHHHHH
T ss_pred hccCCCCCeeEEEeccCC-HHHHHHHHH
Confidence 012478999999765 455555554
No 263
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.80 E-value=3.1e-18 Score=154.95 Aligned_cols=330 Identities=18% Similarity=0.245 Sum_probs=230.7
Q ss_pred CCCchHHHHHHhCCCC-CCeEEcCCCCC--CCC---CCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc-C----
Q 014594 79 PILPFEVLSIQLGRKP-EDIVKIDANEN--PYG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G---- 143 (422)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~i~l~~~~~--~~~---~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~-~---- 143 (422)
|.+++..+.+.+..++ ..-|+|+.|.. +.+ ..|.|++|-.++ .....| |..|..++.+..+++. |
T Consensus 35 PpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~ 114 (427)
T KOG1411|consen 35 PPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSP 114 (427)
T ss_pred CCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCch
Confidence 3445555666666543 34578877742 112 246777765542 222457 8889999999999985 3
Q ss_pred -CCCCCEEE--eCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhc
Q 014594 144 -LESDHILV--GCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER 216 (422)
Q Consensus 144 -~~~~~i~~--~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~ 216 (422)
+..++|+. |-++|.++.+....+ .-++..|.++.|+|.....+...+|..+..+. .....++|.+.+.+.+.+
T Consensus 115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~ 194 (427)
T KOG1411|consen 115 VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE 194 (427)
T ss_pred hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhc
Confidence 23344433 334566665554422 34678899999999999999999999887776 345568999998888865
Q ss_pred CCCeEEEEe--CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc------hhhhhhcCCcEEEEccChhh
Q 014594 217 EKPKCIFLT--SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES------RMEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 217 ~~~~~i~l~--~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~------~~~~~~~~~~~i~~~S~SK~ 284 (422)
.....+++. -.|||||+-.+.|++++|.+. +.+-+.|.+|..|..+.. ....+.+..+++++.||+|.
T Consensus 195 ~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKN 274 (427)
T KOG1411|consen 195 APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKN 274 (427)
T ss_pred CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhh
Confidence 444455555 458999999999999999875 899999999999985431 12334567788999999999
Q ss_pred hccccccceeeec---CHHHHH----HHHHhcCC-C-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHH
Q 014594 285 AGLAGLRVGYGAF---PLSIIE----YLWRAKQP-Y-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFK 347 (422)
Q Consensus 285 ~~~~G~r~G~i~~---~~~~~~----~l~~~~~~-~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~ 347 (422)
+|+.|.|+|.+.+ +.+... +++...++ | +++.-+...+...|.+. +|+. +.+++...|+.|.+
T Consensus 275 MGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d 354 (427)
T KOG1411|consen 275 MGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFD 354 (427)
T ss_pred cchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhH
Confidence 9999999998643 444443 34444444 3 45556777888888885 4544 88899999999999
Q ss_pred HHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594 348 LLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH 420 (422)
Q Consensus 348 ~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~ 420 (422)
.|+..+ |..+..+-|+|.+-.+ +.+++-..-.++.|++..-+ |||++. ....+.|.+++..
T Consensus 355 ~L~~~gs~~~W~hI~~QIGMF~fTgl----~peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~ 421 (427)
T KOG1411|consen 355 ALEKEGSPGNWSHITKQIGMFCFTGL----NPEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHA 421 (427)
T ss_pred HhhcCCCCccHHHHHHhhheeeecCC----CHHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHh
Confidence 998754 3336677888887544 56666555558899988654 888763 4445777777654
No 264
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=6.1e-17 Score=158.76 Aligned_cols=318 Identities=16% Similarity=0.086 Sum_probs=206.8
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHH----HHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRR----LRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~------~~~-~~~----lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
.+.|.|-.+||-. ++.+++++... .+..+|| ... ..+ ..+...+.|+.+..+|-.-+|+. |+.
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~ 125 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL 125 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence 4558898888876 58888888752 2323332 222 222 34445566888777888877766 555
Q ss_pred HHHHHhcCC-------------------------------CCEEEEcCCCchhHH---HHHHHcC--CEEEEecCC-CCC
Q 014594 161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYE---FDAAVNG--AAVVKVPRK-SDF 203 (422)
Q Consensus 161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~---~~~~~~g--~~~~~v~~~-~~~ 203 (422)
.++.++++| ||+|+..++..+.+. ......| .+.+.++.+ ++.
T Consensus 126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g 205 (493)
T PRK13580 126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG 205 (493)
T ss_pred HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence 666668776 799997766553221 1111122 344455544 346
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchh-hhh-hcCCcEEEEcc
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM-EWV-KKHDNLIVLRT 280 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~-~~~-~~~~~~i~~~S 280 (422)
.+|++++++.+. .+++.|++++.+|- |...|.+++.+|++. |+++++|++|.......... ... ...+..++++|
T Consensus 206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT 283 (493)
T PRK13580 206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT 283 (493)
T ss_pred ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence 799999999997 56777778888886 558899999999987 99999999998644322111 000 11245588999
Q ss_pred ChhhhccccccceeeecCHHHHHHHHHhcCCC---CCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCC
Q 014594 281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 281 ~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~---~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 354 (422)
++|.+ .|-+.|++++++++++.+.... ++ +..+...+++..++. .+++.+.++++.++.++|.+.|++.|+
T Consensus 284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~ 360 (493)
T PRK13580 284 THKTL--RGPRGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGA 360 (493)
T ss_pred Chhhc--cCCCeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99987 2344699999999999885443 32 222222222222332 234433788999999999999999886
Q ss_pred Cccc-CCCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCCC---CC---CCeEEEEecC-------hhhHHHHHHHHh
Q 014594 355 LNPY-PSYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNNK---EL---KGYVRVSVGK-------PEHTDALMECLM 419 (422)
Q Consensus 355 ~~~~-p~~~~f~~~~~~~~~-~~~~~~~~L~~~gI~v~~~~~~---~~---~~~iRis~~~-------~~~~~~l~~al~ 419 (422)
..+. .+.+..+++.+.+.. ....+.+.|.+.||.+.....+ .. ...|||+... .++++++.+.|.
T Consensus 361 ~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~ 440 (493)
T PRK13580 361 RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIV 440 (493)
T ss_pred CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHH
Confidence 4432 345678888886322 2345667888999999754332 22 5789999753 566777777765
Q ss_pred h
Q 014594 420 H 420 (422)
Q Consensus 420 ~ 420 (422)
+
T Consensus 441 ~ 441 (493)
T PRK13580 441 K 441 (493)
T ss_pred H
Confidence 4
No 265
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=6.3e-17 Score=161.09 Aligned_cols=324 Identities=14% Similarity=0.105 Sum_probs=197.5
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCCC--C---CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~~--~---y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +.... . ++.+...++.+.|++.++.. .+.+++++++++|++
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 131 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE 131 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 45678899998774 333 457888888876 32211 1 12233456777777776532 258999999999999
Q ss_pred HHHHHh--cCCCCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCCCC------C--------CHHHH
Q 014594 161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI 210 (422)
Q Consensus 161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~------~--------d~~~l 210 (422)
.+++.- ....++|+...++|++....+... +. .+..++....+. . .++.+
T Consensus 132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (443)
T PRK06058 132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI 211 (443)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence 999932 122378999999998776544321 11 122222111111 0 12334
Q ss_pred HHHhhcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChh
Q 014594 211 ADAVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 211 ~~~i~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK 283 (422)
++.+..+++.+|++...+.-.|.+.+ .++++++|+. |+++|.||++..|...+... ...+..++++ +++|
T Consensus 212 ~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv---~~gK 288 (443)
T PRK06058 212 EKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI---TTAK 288 (443)
T ss_pred HHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE---EEcc
Confidence 44443356778876544433455543 4555666665 99999999999886444322 2222233333 4579
Q ss_pred hhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcc
Q 014594 284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNP 357 (422)
Q Consensus 284 ~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~ 357 (422)
.++ +|+++|++++++++++.+.... ..|+.|+++++++.++|+.-+-.+..++.+++.+++.+.|+++ +.+.-
T Consensus 289 ~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 367 (443)
T PRK06058 289 GIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGD 367 (443)
T ss_pred ccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 998 8999999999999988775332 3578899999999999853111115566666677777777653 43222
Q ss_pred cCCCceEEEEEeCCC---C-C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 358 YPSYSNFILCEVTSG---M-D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 358 ~p~~~~f~~~~~~~~---~-~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
....|.++.+.+... . + ...+.+.+.++||.+.++... ++++|+......+.+++++++++
T Consensus 368 vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~ 435 (443)
T PRK06058 368 VRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDV 435 (443)
T ss_pred eeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHH
Confidence 356677776666321 1 1 345677778999999875422 47999986532223444444443
No 266
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.80 E-value=1.3e-17 Score=162.30 Aligned_cols=250 Identities=18% Similarity=0.197 Sum_probs=177.7
Q ss_pred cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCC
Q 014594 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN 206 (422)
Q Consensus 129 ~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d 206 (422)
+...++++++++++|. ++++.+++++.||.+++.++ +++||+|+++.-+|..........|++++.++.+ +++.+|
T Consensus 25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id 102 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID 102 (363)
T ss_dssp HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence 4478999999999994 68999999999999999987 6799999999999999999999999999999976 789999
Q ss_pred HHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccC--h
Q 014594 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--S 282 (422)
Q Consensus 207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--S 282 (422)
++.+++.++ +++|+|+++ +.-|...+.+++.++|+. |++||+|.+++... +.+...+..+ .+.+.|| +
T Consensus 103 ~~~~~~~i~-~~t~ai~~~---h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~ 174 (363)
T PF01041_consen 103 PEALEKAIT-PKTKAILVV---HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT 174 (363)
T ss_dssp HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred HHHHHHHhc-cCccEEEEe---cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence 999999998 789999955 457888999999999986 99999999998654 2333333322 2667777 6
Q ss_pred hhhccccccceeeecC-HHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHccCChHHH-HHHHHHHH
Q 014594 283 KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQNPIYLE-VKEALIKE 341 (422)
Q Consensus 283 K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-------------------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~ 341 (422)
|.+. .| ..|+++++ +++.+++...... +.++.+..+.+...|+. ++ ..++-+++
T Consensus 175 K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~---L~~~~~~R~~~ 249 (363)
T PF01041_consen 175 KIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKR---LDEIIARRREN 249 (363)
T ss_dssp SSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHT---HHHHHHHHHHH
T ss_pred CCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHH---hhhhHHHHHHH
Confidence 8764 33 35888875 6677777654321 23445555555555543 33 55666788
Q ss_pred HHHHHHHHccCCCCcc--cCCCc----e-EEEEEeCCC--CCHHHHHHHHHhCCcEEEeCC
Q 014594 342 RERLFKLLKDVPFLNP--YPSYS----N-FILCEVTSG--MDAKKLKDDLAKMGVMIRHYN 393 (422)
Q Consensus 342 ~~~l~~~L~~~~~~~~--~p~~~----~-f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~ 393 (422)
.+.+.+.|.+++.+.. .+.+. . .+.+.+++. .+.+++.+.|.++||.++...
T Consensus 250 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 250 AQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHY 310 (363)
T ss_dssp HHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCST
T ss_pred HHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccc
Confidence 8888899998876532 22221 2 234566543 368999999999999998655
No 267
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.80 E-value=4.9e-17 Score=155.45 Aligned_cols=243 Identities=21% Similarity=0.208 Sum_probs=176.3
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~ 201 (422)
+.+|....|+++++++-| .++.+.+++++.|+..++..++++||.|+++...|.... ......|+++..++.
T Consensus 60 ~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~-- 135 (396)
T COG0626 60 TGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-- 135 (396)
T ss_pred CCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC--
Confidence 356667899999999987 468899999999999999999999999999999886433 334558999988873
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
.|.+++++++.++++|+|++.+|.||+-.+.++..+.++++. |+++|+|..|..-.+.. ++ ..+.+|++.|
T Consensus 136 ---~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvhS 207 (396)
T COG0626 136 ---GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVHS 207 (396)
T ss_pred ---CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEEe
Confidence 345677777764689999999999999999999999999998 89999999998433211 11 3445699999
Q ss_pred Chhhhcccc-ccceeeecCH-HHHHHHHHhcC---CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 281 FSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 281 ~SK~~~~~G-~r~G~i~~~~-~~~~~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
.+|.++.-+ +=.|.++++. ++.+.+..... ...+++.....+..-| +-+. +.++..++...+.+.|++.+.
T Consensus 208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGl---kTL~~Rm~~~~~nA~~IA~~L~~~p~ 284 (396)
T COG0626 208 ATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGL---RTLALRMERHNENALKIAEFLADHPK 284 (396)
T ss_pred ccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999775332 3356666555 45555422222 2345666655444444 4455 778888999999999999776
Q ss_pred Cc--ccCC----------------CceEEEEEeCCCCCHHHHHHHHH
Q 014594 355 LN--PYPS----------------YSNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 355 ~~--~~p~----------------~~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
+. .+|. .|..+.+++.++.+..+|.+.|.
T Consensus 285 V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~ 331 (396)
T COG0626 285 VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLK 331 (396)
T ss_pred eEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCC
Confidence 54 3453 45667788864333445555554
No 268
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.80 E-value=2.2e-17 Score=159.01 Aligned_cols=272 Identities=13% Similarity=0.048 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHcCCC-CCCEEEeCC-HHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC----CC
Q 014594 131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD 202 (422)
Q Consensus 131 ~~~lr~~la~~~~~~-~~~i~~~~G-~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~----~~ 202 (422)
..++++.++++++.+ ..+|++++| +|.+++.++..++.+||++++...+.. .+...++..|+ +..+..+ ++
T Consensus 39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~ 117 (349)
T TIGR01364 39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT 117 (349)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence 457899999999973 346888877 999999999999999999877665553 55677888898 6666632 33
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
..+|+++++. . +++++|.++|..|.||...+ ++++. ++++++|.+.+.....- . +++.+ +++.|.
T Consensus 118 ~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~i-d---~~~~d--~~~~ss 183 (349)
T TIGR01364 118 KIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPI-D---VSKFG--LIYAGA 183 (349)
T ss_pred CCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccC-C---HHHcc--EEEEec
Confidence 3567776652 3 58999999999999999886 56655 89999999987433211 1 12233 888889
Q ss_pred hhhhccccccceeeecCHHHHHHHHH-----------h--cC-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHH
Q 014594 282 SKRAGLAGLRVGYGAFPLSIIEYLWR-----------A--KQ-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERE 343 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~~~~~~~l~~-----------~--~~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~ 343 (422)
.|.+|.+| +|+++++++.++++.. . .. +++++.....++.++|+. .+.++ +.++.++..+
T Consensus 184 qK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~ 261 (349)
T TIGR01364 184 QKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ 261 (349)
T ss_pred ccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999777 7999999988875521 1 11 346677766666666653 31356 9999999999
Q ss_pred HHHHHHccCCCCccc-C---CCc-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594 344 RLFKLLKDVPFLNPY-P---SYS-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 415 (422)
Q Consensus 344 ~l~~~L~~~~~~~~~-p---~~~-~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 415 (422)
++++.|++++++... . ..+ ..+.+.+++.....++...+.++|+.+..+.. ..+.+|+|+. +.++++.|.
T Consensus 262 ~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~ 339 (349)
T TIGR01364 262 LLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALV 339 (349)
T ss_pred HHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHH
Confidence 999999999644222 1 123 34556666321236666777889996666543 2468999975 467788888
Q ss_pred HHHhhh
Q 014594 416 ECLMHL 421 (422)
Q Consensus 416 ~al~~l 421 (422)
++|+.+
T Consensus 340 ~al~~~ 345 (349)
T TIGR01364 340 DFMKEF 345 (349)
T ss_pred HHHHHH
Confidence 888764
No 269
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.79 E-value=8.4e-17 Score=158.95 Aligned_cols=324 Identities=14% Similarity=0.139 Sum_probs=207.1
Q ss_pred CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~---~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.+++.++|+..+ ...+ ..+|+|.+++.+ +. ....| ..+...++.++|++...-..+.++++++++||++.+
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A 150 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA 150 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 4567889999887 4444 357888888875 22 21222 344456788888877754446899999999999999
Q ss_pred HHHhcC----CC-CEEEEcCCCchhHHHHHHHcCCE-EE---EecCCCCC----CCCHHHHHHHhhc-----CCCeEEEE
Q 014594 163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVNGAA-VV---KVPRKSDF----SLNVELIADAVER-----EKPKCIFL 224 (422)
Q Consensus 163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~-~~---~v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l 224 (422)
++.-.. .| .+|+....+|++....+...... .. ..|...+. ..|.+.+++.+++ .++.+|++
T Consensus 151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIv 230 (442)
T TIGR03372 151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIIL 230 (442)
T ss_pred HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEE
Confidence 994321 23 67999999897655443322111 00 01111110 1256777776642 45778888
Q ss_pred eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-ccceeee
Q 014594 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA 296 (422)
Q Consensus 225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~ 296 (422)
.......|...+ .+++.++|+. |+++|+||++..|...+.. ....+-.++++ +++|.+| .| +.+|.++
T Consensus 231 Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-~G~~Pigavv 306 (442)
T TIGR03372 231 EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL---CLAKALG-GGVMPIGATI 306 (442)
T ss_pred eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee---eehhhhc-CCcccceEEE
Confidence 877777899888 6777788876 9999999999877543332 11222223333 4899998 78 6899999
Q ss_pred cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC-CCcccCCCceEEEE
Q 014594 297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP-FLNPYPSYSNFILC 367 (422)
Q Consensus 297 ~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~~~f~~~ 367 (422)
+++++.+.+.. ...+|+.|+++.+++.+.|+.-+-.+..++.++.-+++.+.|++ ++ .+.-....|.++.+
T Consensus 307 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~gi 386 (442)
T TIGR03372 307 ATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAI 386 (442)
T ss_pred ecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEE
Confidence 99998887742 12346678888888888875311101344445555555555544 44 22223567888889
Q ss_pred EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 368 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
++.+......+.+.|+++||++..... ..+.+||.... .++.|++.+++++
T Consensus 387 el~~~~~~~~i~~~l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 387 EFRDNEIGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred EeCChHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 886433456788999999999976432 14789999763 4445555555543
No 270
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=4.6e-17 Score=160.60 Aligned_cols=214 Identities=14% Similarity=0.086 Sum_probs=151.8
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~ 202 (422)
..+....+++.++++.|. .+.|++ ++++.++.+++.+++++||+|+++...|.... ..+...|++++.++. .
T Consensus 67 ~~pt~~~le~~la~l~g~-~~~v~f-sSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~- 142 (437)
T PRK05613 67 TNPTVEALENRIASLEGG-VHAVAF-ASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P- 142 (437)
T ss_pred cChHHHHHHHHHHHHhCC-CeEEEe-CCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C-
Confidence 345578899999999996 344555 55558888888888999999999999997653 344668999999972 2
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
.|++.++++++ +++++|+++++.||+|.+.+.+++.++++. |+++|+|.++..... .... ..+.++++.|+
T Consensus 143 --~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~----~~GaDivv~S~ 214 (437)
T PRK05613 143 --DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPL----ELGADVVVASL 214 (437)
T ss_pred --CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChH----HhCCCEEEeec
Confidence 28999999997 689999999999999999999999999987 999999999864321 1111 23456999999
Q ss_pred hhhhcccccccee-eecCHHH-----------------------------------H-HHHHHhc--CCCCCcHHHHHHH
Q 014594 282 SKRAGLAGLRVGY-GAFPLSI-----------------------------------I-EYLWRAK--QPYNVSVAAEVAA 322 (422)
Q Consensus 282 SK~~~~~G~r~G~-i~~~~~~-----------------------------------~-~~l~~~~--~~~~~~~~~~~aa 322 (422)
+|.++..|--+|- ++.+.++ . +...... ....+++.....+
T Consensus 215 ~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~ 294 (437)
T PRK05613 215 TKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVT 294 (437)
T ss_pred cceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9987755544444 4433220 0 0010111 1234555555444
Q ss_pred HHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 323 CAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
...| +-+. +.++..++...+.+.|++++.+
T Consensus 295 ~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 295 AQGL---DTLSLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4333 3355 7788899999999999988754
No 271
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.79 E-value=1.3e-16 Score=154.61 Aligned_cols=299 Identities=14% Similarity=0.113 Sum_probs=198.7
Q ss_pred CCCCCCHHHHHHHhcCC-----CCCCCCCc--chHHHHHHHHHHcCCCC-CCEEEe-CCHHHHHHHHHHHhcCCCCEEEE
Q 014594 105 NPYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVD 175 (422)
Q Consensus 105 ~~~~~~~~v~~al~~~~-----~~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~~-~G~~~al~~~~~~l~~~gd~Vl~ 175 (422)
.|...++++++++.... .+++-+.. -..+.|+.+++++++++ .+|+++ +|+|.+++.++..++.+ +.+++
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i 88 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL 88 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence 45566899999987531 12333443 26789999999999854 478886 55999999999998743 34445
Q ss_pred cCCCch-hHHHHHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594 176 CPPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (422)
Q Consensus 176 ~~p~y~-~~~~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li 251 (422)
....|. .+...+.. .+.++..++.+++..++. .+. +++++|.++|.+|.||...|.+++ ++. |++++
T Consensus 89 ~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i 159 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVV 159 (361)
T ss_pred ecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEE
Confidence 555564 44445554 233566666444433433 233 689999999999999999998877 454 99999
Q ss_pred EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-----------------------
Q 014594 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----------------------- 308 (422)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~----------------------- 308 (422)
+|.+.+.....-. +. . .++++.|-.|.+|.+| .++++++++++++++...
T Consensus 160 VDavqs~g~~~id-v~---~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~ 232 (361)
T TIGR01366 160 IDATSGAGGLPVD-IA---E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKN 232 (361)
T ss_pred EEcCccccCCCCC-HH---H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccC
Confidence 9999885432111 11 1 3478889999998775 266667788877665421
Q ss_pred cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CC---c-eEEEEEeCCCCCHHHHH
Q 014594 309 KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SY---S-NFILCEVTSGMDAKKLK 379 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~---~-~f~~~~~~~~~~~~~~~ 379 (422)
..+++++.....++.++++ ..+.++ +.+++++..+++++.|+++++..+.. .. . ....+.++++.+.+++.
T Consensus 233 ~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~ 312 (361)
T TIGR01366 233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVA 312 (361)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHH
Confidence 1123444443334444443 332245 77899999999999999988654331 11 1 11234556678999999
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.|.++||.+.++......+.+|||+. +.+++++|.++++.
T Consensus 313 ~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 313 KILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred HHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 999999999976543333578999975 56667777777765
No 272
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.79 E-value=7.1e-17 Score=148.70 Aligned_cols=348 Identities=17% Similarity=0.144 Sum_probs=233.3
Q ss_pred CCCchHHHHHhhccCCCCCCCchHHH---HHHhC------CC-CCC-eEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCC
Q 014594 61 LTGDSFIRSHLRKLKPYQPILPFEVL---SIQLG------RK-PED-IVKIDANENPYGPPPEVREALGQ-LK-FPYIYP 127 (422)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~-~~~-~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~ 127 (422)
.+.+.|+++.+.+-.....+..|..+ +..+. .. ..+ -++.++..-....+|+|.+|+.+ ++ ++.+-+
T Consensus 127 F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG 206 (570)
T KOG1360|consen 127 FDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG 206 (570)
T ss_pred ccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC
Confidence 56777888877654443333333322 22221 11 011 24444444555778999999987 32 222211
Q ss_pred -------Cc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEe
Q 014594 128 -------DP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV 197 (422)
Q Consensus 128 -------~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v 197 (422)
.. -..+|++.||++.+- +..+++++.-- |.+..+..| .-||=+|......+.......+..++.-+.+
T Consensus 207 GTRNIsG~s~~hv~LE~eLA~LHqK-~aALlFsSCfV-ANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF 284 (570)
T KOG1360|consen 207 GTRNISGHSKHHVRLEAELADLHQK-EAALLFSSCFV-ANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF 284 (570)
T ss_pred CccccCCCCchhhhHHHHHHHHhcC-cceeeeeeeee-ccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee
Confidence 11 145899999999983 34455544322 333333333 2367777777778877777777777665554
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhh---
Q 014594 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK--- 270 (422)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~--- 270 (422)
. .-|++.|++.+++ ..+|+|-+.+.+..+|.+.|+|||.++++. |.+..+||+++-..+++....-.+
T Consensus 285 r-----HND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdG 359 (570)
T KOG1360|consen 285 R-----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDG 359 (570)
T ss_pred c-----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCC
Confidence 4 3478888887754 468999999999999999999999999998 999999999985444332211111
Q ss_pred -cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC----CCcHHHHHHHHHHcc---CChHHHHHHHHHHHH
Q 014594 271 -KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAALQ---NPIYLEVKEALIKER 342 (422)
Q Consensus 271 -~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~----~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~ 342 (422)
....+|+.+++.|+||+-| ||+.+...+++.++.+...| ++++.....+.++++ ..+....++..+++.
T Consensus 360 vm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv 436 (570)
T KOG1360|consen 360 VMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNV 436 (570)
T ss_pred cchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 2334588999999999988 99999999999998876652 456665555555544 344444777888899
Q ss_pred HHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHH
Q 014594 343 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALM 415 (422)
Q Consensus 343 ~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~ 415 (422)
+++++.|.++| +.+.|..+..+.+++.+..-+.++.+.|. ++||+|-.... ..+...+||.... +.-++.|.
T Consensus 437 ~~~kq~l~~~G-iPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv 515 (570)
T KOG1360|consen 437 KYVKQLLMELG-IPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILV 515 (570)
T ss_pred HHHHHHHHHcC-CcccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHH
Confidence 99999999987 45667777888888865555677888887 89999987665 4567789999763 33344455
Q ss_pred HHHh
Q 014594 416 ECLM 419 (422)
Q Consensus 416 ~al~ 419 (422)
+++.
T Consensus 516 ~~l~ 519 (570)
T KOG1360|consen 516 NALL 519 (570)
T ss_pred HHHH
Confidence 5543
No 273
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=3.9e-18 Score=147.13 Aligned_cols=165 Identities=16% Similarity=0.148 Sum_probs=133.8
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH-HHHHHcCCEEEEecCCCCCCCCH--
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV-- 207 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~d~-- 207 (422)
..++++.++++++.+.+++++++|+++++..+++++.+++++|+++.+.|+... ..+...|++++.++.+++...+.
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 367999999999766789999999999999999999888999999999998777 77788999999998655433333
Q ss_pred HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
+.+++.....+++++++++++||+|...+.+++.++++. |+++|+|++|..+...... ......+.++++.|++|.++
T Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~ 160 (170)
T cd01494 82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG 160 (170)
T ss_pred hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence 356555545789999999999999999999999999987 9999999999987643321 11223456688899999887
Q ss_pred cccccceeeecC
Q 014594 287 LAGLRVGYGAFP 298 (422)
Q Consensus 287 ~~G~r~G~i~~~ 298 (422)
. .++|+++++
T Consensus 161 ~--~~~G~l~~~ 170 (170)
T cd01494 161 G--EGGGVVIVK 170 (170)
T ss_pred C--CceEEEEeC
Confidence 4 679998863
No 274
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.78 E-value=1.2e-16 Score=157.48 Aligned_cols=321 Identities=14% Similarity=0.175 Sum_probs=194.8
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHcCCC---CCCEEE-eCCHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE---SDHILV-GCGADE 157 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~-~~~~----y~~~~~~~lr~~la~~~~~~---~~~i~~-~~G~~~ 157 (422)
+.+++.+||+..+... + ..+|++.+++.+ +. ..+. +......+|-++|++....+ .+.+++ ++++++
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 4567889999877432 3 457999998876 32 1111 11223345666666653211 125656 589999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC---CCHHHHHHHhhc---
Q 014594 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS---LNVELIADAVER--- 216 (422)
Q Consensus 158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~---~d~~~l~~~i~~--- 216 (422)
|++.+++... ....+|+....+|++....+.. .|. .+..+|.++... -+++.+++.+.+
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 9999999532 2236799989999866544332 121 223333221111 246778887753
Q ss_pred --CCCeEEEEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcc
Q 014594 217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~ 287 (422)
+++.+|++....++.|. +.+.+.+++|.+. |+++|+||++..|...+.... .....++ +.+++|.++.
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD---i~~~~K~lg~ 267 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD---IVCLSKSISG 267 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC---EEEechhccC
Confidence 35678888888888998 4577766666543 999999999997754332211 1111223 2357899883
Q ss_pred ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHcc----CChHHHHHHHHHHHHHHHHHHHc----cCC-CCc
Q 014594 288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ----NPIYLEVKEALIKERERLFKLLK----DVP-FLN 356 (422)
Q Consensus 288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~----~~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~ 356 (422)
.|+|+|++++++++ +.+.. ....|+.++++..++.++|+ ++++. ++.++..+++.+.|+ .++ ...
T Consensus 268 ~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~~ 343 (412)
T TIGR02407 268 YGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFE---KAVQRKSEIIQERLDRIVAEYPELIK 343 (412)
T ss_pred CccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 39999999998886 44432 22346777876666555554 33333 333344444444333 344 222
Q ss_pred ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 357 ~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
..+..|.++|+++++......+.+.+.++||.+.+... .++.+||+.....+.+++.++++.
T Consensus 344 ~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~ 405 (412)
T TIGR02407 344 QVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDI 405 (412)
T ss_pred eeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 34577899999997544567888899999999987532 247899997743333445554444
No 275
>PRK06541 hypothetical protein; Provisional
Probab=99.78 E-value=2.1e-16 Score=157.45 Aligned_cols=323 Identities=17% Similarity=0.172 Sum_probs=204.2
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +... ..|+.+...++.+.|++..+.+.+.+++++++++|++.
T Consensus 48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~ 127 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES 127 (460)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence 34678899998773 333 357888888876 2211 12344445677788887765444699999999999999
Q ss_pred HHHHhcC-------C-CCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC-----CCCC--------H
Q 014594 162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD-----FSLN--------V 207 (422)
Q Consensus 162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~-----~~~d--------~ 207 (422)
+++.... + ..+|+....+|++....+.. .|. .+..+|.++. ++-+ +
T Consensus 128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (460)
T PRK06541 128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA 207 (460)
T ss_pred HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence 9884321 1 36788888888755443322 111 1223332211 1122 3
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~ 277 (422)
+.+++.+.+ .++.+|++...+++.|.+.+ .+++.++|+. |+++|+||+|..|...+... ...+..++++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv- 286 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII- 286 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE-
Confidence 667777752 34556665565899999988 6677777776 99999999998775333221 1122223333
Q ss_pred EccChhhhccccc-cceeeecCHHHHHHHHHhc------CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc
Q 014594 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK 350 (422)
Q Consensus 278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~~------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 350 (422)
+++|.++ .|+ ++|++++++++++.+.... ..++.++++.+++.+.|+.-+..+..++++++.+++.+.|+
T Consensus 287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~ 363 (460)
T PRK06541 287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLE 363 (460)
T ss_pred --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4899998 887 9999999999988775321 24667888888888887542111156777788888888877
Q ss_pred cC---CCCcccCCCceEEEEEeCCC------CC-------H-HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594 351 DV---PFLNPYPSYSNFILCEVTSG------MD-------A-KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 410 (422)
Q Consensus 351 ~~---~~~~~~p~~~~f~~~~~~~~------~~-------~-~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 410 (422)
++ +.+......|.++.+++... .+ . ..+.+.|.++||.+.+.. ...+.+||+.. +.++
T Consensus 364 ~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~g~~~lrl~Ppl~~t~~~ 441 (460)
T PRK06541 364 KLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--RGDPVVQLAPPLISGQEE 441 (460)
T ss_pred HhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC--CCCCEEEEECCCCCCHHH
Confidence 65 22222446677777776321 00 0 246677889999998732 12478999976 3444
Q ss_pred HHHHHHHHh
Q 014594 411 TDALMECLM 419 (422)
Q Consensus 411 ~~~l~~al~ 419 (422)
++++.++++
T Consensus 442 id~~~~~l~ 450 (460)
T PRK06541 442 FDEIEQILR 450 (460)
T ss_pred HHHHHHHHH
Confidence 554444443
No 276
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.78 E-value=1.9e-16 Score=152.60 Aligned_cols=292 Identities=14% Similarity=0.067 Sum_probs=204.8
Q ss_pred HHHHHhc--CCCCCCCCCcc--hHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCch-hHH
Q 014594 113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFT-MYE 184 (422)
Q Consensus 113 v~~al~~--~~~~~~y~~~~--~~~lr~~la~~~~~~~~~--i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~-~~~ 184 (422)
..+++.+ +..+|+-|... ..++++.+.++++.+.+. ++++.|++.++++++.+++ ++|++|++.. .|. .+.
T Consensus 19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~ 97 (374)
T TIGR01365 19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV 97 (374)
T ss_pred hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence 6677765 33445545542 578899999999974332 6779999999999999998 5888888865 664 334
Q ss_pred -HHHHHcCC-EEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCccccCC
Q 014594 185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL 262 (422)
Q Consensus 185 -~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~ 262 (422)
.+++..|+ ++..+..+++..+|+++++. . +.|+++|....||+..|.+++.+.. .+.++|+|.+-+..+.
T Consensus 98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~- 169 (374)
T TIGR01365 98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQ- 169 (374)
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCC-
Confidence 78888999 47777777777899999973 1 2367899999999999986554322 3899999988664332
Q ss_pred CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------------------------cCCCCCcHH
Q 014594 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------KQPYNVSVA 317 (422)
Q Consensus 263 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------------------------~~~~~~~~~ 317 (422)
+-... +-++++.|-.|++++|+ .+++++++++.+++.... ..+++++..
T Consensus 170 ~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~ 243 (374)
T TIGR01365 170 DLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML 243 (374)
T ss_pred CCChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence 11111 24588889999998765 478888888887665421 113455666
Q ss_pred HHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----Cce-EEEEEeCCC-C-----C-----HHH
Q 014594 318 AEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSN-FILCEVTSG-M-----D-----AKK 377 (422)
Q Consensus 318 ~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~-f~~~~~~~~-~-----~-----~~~ 377 (422)
...++..+|+ +.+.++ +.++++++.+.+++.++++|+....+. .++ .+.+.++++ . + ..+
T Consensus 244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T TIGR01365 244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE 323 (374)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence 6677766664 333466 999999999999999999985554331 232 244566433 3 3 688
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 419 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 419 (422)
+.+.|+++||.+.+|.....+..|||+... .++++.|..+|+
T Consensus 324 ~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 324 LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 999999999999988765556899999654 444455554443
No 277
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=3.1e-16 Score=155.97 Aligned_cols=323 Identities=13% Similarity=0.162 Sum_probs=208.0
Q ss_pred CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~---~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.+++.++|+..+ ...+ ..+|+|.+++.+ +.. . ..++.+...+|.++|++...-..+.+++++++++|++.+
T Consensus 78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 157 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA 157 (459)
T ss_pred ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence 3567889999887 3444 357889888876 321 1 123445566788888887754456899999999999999
Q ss_pred HHHhc--C--CC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCCC----CCCHHHHHHHhhc-----CCCeEEEE
Q 014594 163 MRCVL--D--PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL 224 (422)
Q Consensus 163 ~~~l~--~--~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l 224 (422)
++.-. . +| .+|+....+|++....+.. .|-.... .|..+++ ..|.+.+++.+.+ .++.+|++
T Consensus 158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv 237 (459)
T PRK11522 158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL 237 (459)
T ss_pred HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence 99432 1 22 4688888889866544332 2211111 1110110 1267888887752 35678888
Q ss_pred eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-ccceeee
Q 014594 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA 296 (422)
Q Consensus 225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~ 296 (422)
.......|.+.+ .+++.++|+. |+++|+||++..|...+... ...+..++++ +++|.+| .| +.+|.++
T Consensus 238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-gG~~Pigav~ 313 (459)
T PRK11522 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL---CLAKALG-GGVMPIGATI 313 (459)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE---Eechhhh-CCCccceeEE
Confidence 877888899887 6777778876 99999999998775433321 1122223333 6799998 67 6899999
Q ss_pred cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----C-CCcccCCCceEEEE
Q 014594 297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----P-FLNPYPSYSNFILC 367 (422)
Q Consensus 297 ~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~p~~~~f~~~ 367 (422)
+.+++.+.+.. ...+|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.|+++ + .+.-....|.++.+
T Consensus 314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~gi 393 (459)
T PRK11522 314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAI 393 (459)
T ss_pred EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEE
Confidence 99998886642 123466688888888888764211124556666666666666553 3 22223456788888
Q ss_pred EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 368 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
++.+......+.+.|.++||.+.+.. ...+.+|+.++ +.++++++.++++
T Consensus 394 el~~~~~~~~i~~~l~~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 394 EFVDNEIGYNFASEMFRQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred EecCchHHHHHHHHHHHCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 88643335678888999999997643 12478999876 3445555555544
No 278
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=1.7e-16 Score=154.05 Aligned_cols=237 Identities=16% Similarity=0.183 Sum_probs=164.1
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~ 202 (422)
.+|...+|++.++++.|. +..+++++++.|+.+++.+++++||+|+++.+.|. .+...+...|++++.++.++.
T Consensus 62 ~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred CChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 455678999999999985 46788888899999999999999999999887664 333556678999999986432
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
..++ +..+++++|++.+|.|||+.+.+.+++.++++. + +++|.++.... ...++ ..+-++++.|.
T Consensus 140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-~~~pl----~~gaDivv~S~ 205 (384)
T PRK06434 140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-NQNPL----DLGADVVIHSA 205 (384)
T ss_pred hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-cCCch----hcCCCEEEeec
Confidence 1222 222478999999999999999999999999987 6 46799975221 11122 23455889999
Q ss_pred hhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594 282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356 (422)
Q Consensus 282 SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~ 356 (422)
+|.++.+| .-.|.+++ ++++.++++..... ...+++....+..-| +.++ +.++.+++...+.+.|++++.+.
T Consensus 206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL---~tL~~R~~r~~~~a~~~a~~L~~~p~v~ 282 (384)
T PRK06434 206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGL---KTLGLRMEKHNKNGMELARFLRDSKKIS 282 (384)
T ss_pred ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCC---CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99886434 33577766 55666766654322 344554433333333 4455 77888999999999999987653
Q ss_pred --ccCC----------CceEEEEEeCCCCCHHHHHHHH
Q 014594 357 --PYPS----------YSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 357 --~~p~----------~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.+|. .|..+.+++.....+.+|.+.|
T Consensus 283 ~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l 320 (384)
T PRK06434 283 NVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNL 320 (384)
T ss_pred EEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhC
Confidence 2443 3566778885222233444444
No 279
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=2.1e-16 Score=154.86 Aligned_cols=316 Identities=14% Similarity=0.119 Sum_probs=197.3
Q ss_pred CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHcCC--CCCCEEEeCCHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~~~--~~~~i~~~~G~~~al~~~~~ 164 (422)
.+++.++|+..+. ..+ ..+|++.+++.+ +.. .+.+. ....+.+.++++.+.- ..+.+++++++++|++.+++
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik 111 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK 111 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence 3567899998752 223 247889888875 221 11111 1223445555555531 23689999999999999999
Q ss_pred Hhc------CCC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 165 CVL------DPG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 165 ~l~------~~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
... ++| .+|+.....|++....+.. .|..... .|...++ ..|++.+++.+. +++++|+++..++
T Consensus 112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~ 190 (395)
T PRK03715 112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG 190 (395)
T ss_pred HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence 663 123 5788888888765443332 3322111 1111111 247899999886 6788999888888
Q ss_pred ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 230 PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
..|...+ .+++.++|+. |+++|+||+|..|...+... ...+..++ +.+++|.++ .|+.+|.+++++++.
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD---i~t~gK~lg-~G~p~~av~~~~~i~ 266 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD---IMTLGKGIG-GGVPLAALLAKAEVA 266 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc---eeeehhhhh-CCcceEEEEEccccc
Confidence 8888876 6777777776 99999999999875444321 22222222 346789998 679999999988875
Q ss_pred HHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCCCCHHH
Q 014594 303 EYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 303 ~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
.... .....|+.++++.+++.+.|+.-+-.+..++.+++.+++.+.|++ .+ +......|.++.+++.+. ....
T Consensus 267 ~~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~-~~~~ 344 (395)
T PRK03715 267 VFEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKD-IGPQ 344 (395)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCc-hHHH
Confidence 3211 112346778888888888775422111555666666666666654 34 222346678888888531 2345
Q ss_pred HHHHHHhC---CcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594 378 LKDDLAKM---GVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 419 (422)
Q Consensus 378 ~~~~L~~~---gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 419 (422)
+.+.+.+. ||.+.... .+.+||++.. .++++++.++++
T Consensus 345 ~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~ 388 (395)
T PRK03715 345 IVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLR 388 (395)
T ss_pred HHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 66555555 99987543 3689999763 444454444443
No 280
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.77 E-value=1.8e-16 Score=167.72 Aligned_cols=321 Identities=13% Similarity=0.085 Sum_probs=220.6
Q ss_pred CCeEEcCCCCCCCCCCHHHH-HHHhcCCCCCCC-CCc---c----hHHHHHHHHHHcCCCCCCEEEeCCHH----HHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVR-EALGQLKFPYIY-PDP---E----SRRLRAALAKDSGLESDHILVGCGAD----ELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~-~al~~~~~~~~y-~~~---~----~~~lr~~la~~~~~~~~~i~~~~G~~----~al~~ 161 (422)
..+|.|++..+-+.+.-+.. ....++...|-| |.. | ..++|+.+++++|. +.|.++++++ +++.+
T Consensus 525 ~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~ 602 (993)
T PLN02414 525 HSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLM 602 (993)
T ss_pred cCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHH
Confidence 44577777776665322221 111122233445 432 3 34899999999997 7999999999 99999
Q ss_pred HHHHhcCC-CC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594 162 IMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 162 ~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (422)
+++.+.++ || .|+++...|......+...|.+++.++.+.+..+|+++|++++++ +++++|++++|+|-+|..
T Consensus 603 vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e 682 (993)
T PLN02414 603 VIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE 682 (993)
T ss_pred HHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc
Confidence 99999866 88 899999999888778888999999999877779999999999974 478999999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHHHh-
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLWRA- 308 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~~- 308 (422)
.+.+++.++++. |+++++|.++.--.. ........+-++++.|..|.|+ ..|-.+|++.+.+++...+-..
T Consensus 683 ~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~ 759 (993)
T PLN02414 683 EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 759 (993)
T ss_pred chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCc
Confidence 999999999987 999999999853111 1111224566789999999664 2344589998888776654321
Q ss_pred -----------cCC--CCCc------HHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--
Q 014594 309 -----------KQP--YNVS------VAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF-- 364 (422)
Q Consensus 309 -----------~~~--~~~~------~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f-- 364 (422)
... .+.+ .....++..++.. .+.+. ..+....+..++.+.|++.-.+......+.+
T Consensus 760 v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~h 839 (993)
T PLN02414 760 VVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAH 839 (993)
T ss_pred cccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeee
Confidence 100 1211 1233334444433 23344 6777888899999999763222221112221
Q ss_pred -EEEEeC---C--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 365 -ILCEVT---S--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 365 -~~~~~~---~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
..+.++ + +.+..++.++|.++||..-... +...+++||+.. +.+++|+|.+++..+
T Consensus 840 Efv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i 904 (993)
T PLN02414 840 EFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISI 904 (993)
T ss_pred eEEEeccccccccCCCHHHHHHHHHHcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 123332 1 3677899999999999875533 334789999976 466778888887654
No 281
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.77 E-value=1.2e-16 Score=141.88 Aligned_cols=309 Identities=17% Similarity=0.177 Sum_probs=208.3
Q ss_pred CCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCC-----C--CCcc-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANE-NPYGPPPEVREALGQL--KFPYI-----Y--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~-----y--~~~~-~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+++|..|. -.+..+|++.++-.+. .++.+ + +... ...|+..||++.+- ++.++.+.+-.|...++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r--ED~ilypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR--EDTILYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC--CceEEeccccccchHHH
Confidence 4578887653 3456789988776552 12211 1 1222 46799999999983 45666677777888888
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
.+++.|.|.|+.....+.......+.+. ...++|+-.++..+. +.+-|+|+....-...|.+.|.++|
T Consensus 145 eail~pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI 215 (417)
T ss_pred HHhcChhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence 8899999999988888877666555443 122566666665443 2566777767888999999999999
Q ss_pred HHHHcC-CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC---
Q 014594 241 LKILEM-PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--- 312 (422)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~--- 312 (422)
.+|++. |.++++||+|.-+..+.. ....+ .+.+.++..++++|++| |.-.||..+|.++++.+++..++|
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFS 293 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFS 293 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeec
Confidence 999998 999999999986543221 12222 24566788899999976 444599999999999999888874
Q ss_pred -CCcHHHHHH---HHHHcc-CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014594 313 -NVSVAAEVA---ACAALQ-NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387 (422)
Q Consensus 313 -~~~~~~~~a---a~~~L~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI 387 (422)
+.++..... +..+|- ... ...+.+.+.+++++..+.-|+ .+.....+...+-+.+..-+..+.++|+++||
T Consensus 294 nslppavV~~a~ka~dllm~s~~---~i~~~~a~~qrfr~~me~aGf-tIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi 369 (417)
T KOG1359|consen 294 NSLPPAVVGMAAKAYDLLMVSSK---EIQSRQANTQRFREFMEAAGF-TISGASHPICPVMLGDARLASKMADELLKRGI 369 (417)
T ss_pred CCCChhhhhhhHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHhcCc-eecCCCCCccceecccHHHHHHHHHHHHhcCc
Confidence 233322222 222222 112 344556667777777776664 33333345555556444456788899999999
Q ss_pred EEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 388 MIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 388 ~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.|..+++ +.+...||+.++ +++++|++.+|+-.
T Consensus 370 ~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 370 YVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred eEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence 9998777 455668888886 45666777776643
No 282
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=9.4e-16 Score=152.47 Aligned_cols=321 Identities=16% Similarity=0.149 Sum_probs=198.1
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~----~-~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
..+++.++|+..+.. .+ ..+|++.+++.+ +... . .++.+...+|.+.|++.++.. .+.|++++++++|++
T Consensus 38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e 117 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND 117 (445)
T ss_pred eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 346788999977632 33 357888888875 3211 1 134444567888888887533 258999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHH-HcCC-------------EEEEecCCCCCC-----CC-------HHHHHH
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS-----LN-------VELIAD 212 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~-----~d-------~~~l~~ 212 (422)
.+++... ....+|+....+|++....+. ..+. .++.+|.++.+. .+ ++.+++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 9999431 123568888888876543332 1221 123333221111 11 244554
Q ss_pred Hhh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccC
Q 014594 213 AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF 281 (422)
Q Consensus 213 ~i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~ 281 (422)
.+. .+++.+|++....+..|.+.+ .+++.++|+. |+++|+||+|..|...+... ...+..++ +.++
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD---i~t~ 274 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD---LMSF 274 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC---Eeee
Confidence 442 246888998888888898865 5555666665 99999999998875443321 12222233 3368
Q ss_pred hhhhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCC
Q 014594 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFL 355 (422)
Q Consensus 282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~ 355 (422)
+|.++ .|+++|++++++++++.+.... ..++.++++.+++.+.|+.-+-.+..++.+++.+++.+.|+ +++.+
T Consensus 275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v 353 (445)
T PRK08593 275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFV 353 (445)
T ss_pred ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 99998 7899999999999998875322 24667888888888777531111133444444444444444 35544
Q ss_pred cccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 356 NPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 356 ~~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
.-....|.++.+.+... .....+...|.++||.+.+.. .+.+|+... +.++++++.++++
T Consensus 354 ~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 424 (445)
T PRK08593 354 GDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA----GNVLRFQPPLVITYEQLDTALNTIE 424 (445)
T ss_pred EEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC----CCEEEEECCCccCHHHHHHHHHHHH
Confidence 33456666766666321 113567788889999997642 368999876 3445555555544
No 283
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.76 E-value=7.3e-16 Score=152.77 Aligned_cols=323 Identities=15% Similarity=0.154 Sum_probs=195.9
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CC-CCC----CCCCcchHHHHHHHHHHcCCC--CC-CEEE-eCCHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE 157 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~-~~~----~y~~~~~~~lr~~la~~~~~~--~~-~i~~-~~G~~~ 157 (422)
+.+++.+||+..+.. .+ ..+|++.+++.+ +. ..+ .++.+...+|-+++++.+..+ .+ .+++ ++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 456788999987742 23 357889888876 22 111 122333456777777754211 22 5666 589999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHc-C---------C---EEEEecCCCCC---CCCHHHHHHHhhc---
Q 014594 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G---------A---AVVKVPRKSDF---SLNVELIADAVER--- 216 (422)
Q Consensus 158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g---------~---~~~~v~~~~~~---~~d~~~l~~~i~~--- 216 (422)
|++.+++... ....+|+....+|++....+... | . .+..+|.+..+ .-|++.+++.+.+
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 9999999532 22367888888897654433221 1 0 23334432111 1267888888753
Q ss_pred --CCCeEEEEeCCCCccCcC-CCHHHHHHHH---cC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcc
Q 014594 217 --EKPKCIFLTSPNNPDGSI-INDEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG~~-~~~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~ 287 (422)
+++.+|++.......|.+ ++.+.+++|. +. |+++|+||+|..|...+... ...+..+++ .+++|.++.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi---~t~~K~l~~ 271 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDI---VTLSKSISG 271 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCE---EEeccccCC
Confidence 246788888777777864 5565555554 44 99999999999876444322 111222332 367899985
Q ss_pred ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHH--HHHHHHHHHHHHHHHHcc----CCCC-ccc
Q 014594 288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLE--VKEALIKERERLFKLLKD----VPFL-NPY 358 (422)
Q Consensus 288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~--~~~~~~~~~~~l~~~L~~----~~~~-~~~ 358 (422)
.|+++|++++++++ ..+.. ....|+.++++..++.++|++- +.+ ..++++++.+++.+.|++ .+.+ ...
T Consensus 272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~-~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~v 349 (425)
T PRK09264 272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEY-WSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEV 349 (425)
T ss_pred CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecc
Confidence 59999999999886 33322 1234667777777776777321 111 455555666666655544 3322 223
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 359 p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+..|.++++.+++......+.+.+.++||.+.+... ....||++.....+.+++.+++++
T Consensus 350 rg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~ei~~~~~~ 409 (425)
T PRK09264 350 RGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP--EDEVVKLLPPLTIDEEELEEGLDI 409 (425)
T ss_pred eecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEeCCCCCCHHHHHHHHHH
Confidence 456788899997544566888889999999987542 236788886522223445544444
No 284
>PRK02769 histidine decarboxylase; Provisional
Probab=99.75 E-value=6.4e-16 Score=150.02 Aligned_cols=271 Identities=10% Similarity=-0.016 Sum_probs=188.6
Q ss_pred HHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH
Q 014594 132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i--~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 207 (422)
.++++.+++++|.+++++ ++|+|+|+++..++... ..+++.|++++-.|......++..|.+.+.++.++++.+|+
T Consensus 68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~ 147 (380)
T PRK02769 68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY 147 (380)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence 467888899999876665 88999999987665533 25678999999999999899998999888888766778999
Q ss_pred HHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C---CeEEEccCCccccCC---CchhhhhhcCCcEEEE
Q 014594 208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL---ESRMEWVKKHDNLIVL 278 (422)
Q Consensus 208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~---~~li~Deay~~~~~~---~~~~~~~~~~~~~i~~ 278 (422)
++|++.+.+. +|.+|+++.++|+||.+.|.+++.++++. | +++++|.+|..+... ....-.+.. +.+.+.
T Consensus 148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis 226 (380)
T PRK02769 148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIA 226 (380)
T ss_pred HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEE
Confidence 9999999743 48899999999999999999999999987 6 699999999865421 000111111 345677
Q ss_pred ccChhhhccccccceeeecCHHHHHHHHHhcC---------CCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHH
Q 014594 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------PYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLF 346 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---------~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~ 346 (422)
.|.+|.++ ....+|.++.+++..+.+..... ..+.+.....++.++|+ ..++.+..++..+..+++.
T Consensus 227 ~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~ 305 (380)
T PRK02769 227 ISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV 305 (380)
T ss_pred ECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 78999655 34568999998877665532111 12233333344444443 3444448888999999999
Q ss_pred HHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHH
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al 418 (422)
+.|++.+......+..+.+.++.|. +++. +|..+.... +++||.+...-+.+.+++.+
T Consensus 306 ~~L~~~g~~~~~~p~~~~v~f~~~~----~~~~-----~~w~l~~~~-----~~~hi~~~~~~~~~~~~~f~ 363 (380)
T PRK02769 306 DRLQANGIPAWRNPNSITVVFPCPS----ERIW-----KKWHLATSG-----NQAHIITMPHHNKQQIDSLI 363 (380)
T ss_pred HHHHhCCCEEEcCCCceEEEEcCCC----HHHH-----hCeeEcccC-----CEEEEEECCCCCHHHHHHHH
Confidence 9998876544555667777766542 2221 455555432 58999987543333333333
No 285
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.75 E-value=3.3e-15 Score=144.56 Aligned_cols=314 Identities=13% Similarity=0.127 Sum_probs=203.1
Q ss_pred eEEcCCCCCCCCCCHHHHHH-HhcCCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
+|||-+.. ++ ..+.++ +..+..+ ..| .++...+|++++++++|. ++++.+++++.|++++....++|||.|
T Consensus 40 ~iDLltDs---gT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~--~~av~v~sGT~Al~ll~~l~l~pGDeV 113 (450)
T TIGR02618 40 YIDLLTDS---GT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGF--KYVVPTHQGRGAENLLSQIAIKPGDYV 113 (450)
T ss_pred EEEcccCC---Cc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence 46664422 22 556665 5553322 347 667889999999999996 479999999999998887779999977
Q ss_pred EEcCCCch-hHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCcc-CcCCCHH
Q 014594 174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE 238 (422)
Q Consensus 174 l~~~p~y~-~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~e 238 (422)
+.++|. .+....+..|+..+.++. +.++.+|++++++.+++. ++++|.+++++|-. |.+++.+
T Consensus 114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~ 191 (450)
T TIGR02618 114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA 191 (450)
T ss_pred --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence 667774 444446778987777743 235789999999999742 45578888888854 8998875
Q ss_pred HHHH---HHcC-CCeEEEccCCcc----cc------CCCchh----hhhhcCCcEEEEccChhhhccccccceeee-cCH
Q 014594 239 DLLK---ILEM-PILVVLDEAYTE----FS------GLESRM----EWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL 299 (422)
Q Consensus 239 ~l~~---i~~~-~~~li~Deay~~----~~------~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~ 299 (422)
.+.+ +|+. |+.||+|.++.. |. +.+..+ .....+-. .++.|..|.++.+- .|+++ .++
T Consensus 192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD-~~~~S~~Kd~~~~~--GG~l~~~d~ 268 (450)
T TIGR02618 192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD-GCTMSGKKDCLVNI--GGFLCMNDD 268 (450)
T ss_pred HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc-EEEEeeccCCCCCC--ceEEEeCCH
Confidence 5555 4554 999999999864 21 111112 11112222 47778888876551 26666 478
Q ss_pred HHHHHHHHhcCCC-------CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--
Q 014594 300 SIIEYLWRAKQPY-------NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-- 370 (422)
Q Consensus 300 ~~~~~l~~~~~~~-------~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~-- 370 (422)
++++++++....+ .++.-...++..+|.+.--....++-....++|.+.|.+.|.-.+.|.+|+-++++..
T Consensus 269 ~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~ 348 (450)
T TIGR02618 269 EMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRF 348 (450)
T ss_pred HHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHh
Confidence 8999888774332 2233344444444543110013333344578888888887643457888898888652
Q ss_pred ------CCCCHHHHHHHHH-hCCcEEEeCCC------C-C------CCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594 371 ------SGMDAKKLKDDLA-KMGVMIRHYNN------K-E------LKGYVRVSVG----KPEHTDALMECLMHL 421 (422)
Q Consensus 371 ------~~~~~~~~~~~L~-~~gI~v~~~~~------~-~------~~~~iRis~~----~~~~~~~l~~al~~l 421 (422)
....++.+...|. +.||.-.-.+. + . .-..+|+.+. +..++|.+.+++..+
T Consensus 349 lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 349 LPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred CCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 1345778887776 78877653111 0 0 1257999976 456677777777654
No 286
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.75 E-value=1.2e-15 Score=150.10 Aligned_cols=310 Identities=17% Similarity=0.108 Sum_probs=202.2
Q ss_pred CCCHHHHHHHhc-CCCC----CCCCCc--chHHHHHHHHHHcCCC-C-CCEEE--eCCHHHHHHHHHHHhc--------C
Q 014594 108 GPPPEVREALGQ-LKFP----YIYPDP--ESRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D 168 (422)
Q Consensus 108 ~~~~~v~~al~~-~~~~----~~y~~~--~~~~lr~~la~~~~~~-~-~~i~~--~~G~~~al~~~~~~l~--------~ 168 (422)
++.|++.+.+.. +... ..+|.. -..+.++.+++++|++ + +++.. |+|+|+++.+++.+.. .
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667777655 2211 112221 1356788888999987 3 45654 8999999998876542 1
Q ss_pred CC-----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 169 ~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
.| ..|+++.-.|......++..|.++..+|.+.+ +.+|+++|++++. +++.+|+++..+|.||.+.|.+++.+
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~ 210 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND 210 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence 12 36888999999999999889999999997654 5799999999997 67889999999999999999999999
Q ss_pred HHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH--HHHHHHHh--
Q 014594 243 ILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRA-- 308 (422)
Q Consensus 243 i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--~~~~l~~~-- 308 (422)
+++. ++++++|.+|..+.. .+.....+...+..-+..|.+|.+ .....+|+++.+++ +.+.+...
T Consensus 211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~~ 289 (431)
T TIGR01788 211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHVN 289 (431)
T ss_pred HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheeccc
Confidence 9973 699999999995331 111111122233445777889953 33445898887543 22322110
Q ss_pred --cC-----CCCCcHHH-----HHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc-C-CCceEEEEEeCC---
Q 014594 309 --KQ-----PYNVSVAA-----EVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS--- 371 (422)
Q Consensus 309 --~~-----~~~~~~~~-----~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~f~~~~~~~--- 371 (422)
.. ....+... ..+....+....+.++.++..+..+++.+.|++.+.+.+. + ...+.+.+++.+
T Consensus 290 yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~ 369 (431)
T TIGR01788 290 YLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD 369 (431)
T ss_pred ccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC
Confidence 00 01111111 1111122222344447888889999999999998866543 3 355667777753
Q ss_pred -CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHh
Q 014594 372 -GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLM 419 (422)
Q Consensus 372 -~~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~ 419 (422)
+.+..++.+.|.++|+.+.....+ ...-++|+++.. ....++|.+.++
T Consensus 370 ~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~ 424 (431)
T TIGR01788 370 PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIE 424 (431)
T ss_pred CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 356788999999999987544432 123478999852 333455555444
No 287
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=2e-15 Score=150.58 Aligned_cols=319 Identities=16% Similarity=0.111 Sum_probs=199.3
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------Cc-chHHHHH----HHHHHcCCCCCCEEE---eCCHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DP-ESRRLRA----ALAKDSGLESDHILV---GCGADE 157 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~------~~-~~~~lr~----~la~~~~~~~~~i~~---~~G~~~ 157 (422)
.+.|.|-..||.. ++.+++++.. + .++.+|| .. ...++++ ...+.|+.+.+.+++ ..+|+.
T Consensus 34 ~~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~ 111 (475)
T PLN03226 34 WKGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSP 111 (475)
T ss_pred HcCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHH
Confidence 3458888888876 4778888765 2 3333332 11 2334443 344556766655544 366777
Q ss_pred HHHHHHHHhcCCCCEEEEcCC---CchhHHHH---HHHcCCEEE----EecC-CCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 158 LIDLIMRCVLDPGDKIVDCPP---TFTMYEFD---AAVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p---~y~~~~~~---~~~~g~~~~----~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
|+..++.++++|||+|+..+. .|...... .+..+.... .+.. .++..+|++++++.+.+.++++|++.
T Consensus 112 AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~- 190 (475)
T PLN03226 112 ANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG- 190 (475)
T ss_pred HHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-
Confidence 888888899999999998442 33222211 111222211 2222 24567999999999876688877653
Q ss_pred CCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH---
Q 014594 227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--- 302 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~--- 302 (422)
.++ +|...|.+++.+|++. |+++++|++|............. ....+++++|++|.+ .|-+.|+++++++.+
T Consensus 191 ~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~ 266 (475)
T PLN03226 191 ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPK 266 (475)
T ss_pred cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhcccc
Confidence 333 8899999999999998 99999999998543221111110 113558899999986 334458888887544
Q ss_pred --------HH---HHHhcCC---CCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccC-CCceE
Q 014594 303 --------EY---LWRAKQP---YNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYP-SYSNF 364 (422)
Q Consensus 303 --------~~---l~~~~~~---~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f 364 (422)
+. +.....+ .+++....+++.++|+. .++.+.++++.++.++|.+.|.+.|+..+.+ .....
T Consensus 267 ~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi 346 (475)
T PLN03226 267 GQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHL 346 (475)
T ss_pred cCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCE
Confidence 22 1111111 23344444444444543 3443378889999999999999876433322 33566
Q ss_pred EEEEe-CCCCCHHHHHHHHHhCCcEEEeCC----C-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 365 ILCEV-TSGMDAKKLKDDLAKMGVMIRHYN----N-KELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 365 ~~~~~-~~~~~~~~~~~~L~~~gI~v~~~~----~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
+++++ +.+.+..++.+.|.+.||.+..+. . +..+..+|++.. .+++++++.+.|.+
T Consensus 347 ~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 347 VLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred EEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 77887 457788899999999999997543 1 223567999642 34556666666554
No 288
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.74 E-value=2.4e-15 Score=151.02 Aligned_cols=322 Identities=16% Similarity=0.142 Sum_probs=200.4
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELI 159 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al 159 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +... + .++.+...+|.+.|.+.+. .+.+.++++++|++|+
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN 164 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence 45678899998863 233 457888888876 3221 1 1222334567777777653 3345799999999999
Q ss_pred HHHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCCC-------------C
Q 014594 160 DLIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFS-------------L 205 (422)
Q Consensus 160 ~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~-------------~ 205 (422)
+.+++... . ++ .+|+....+|++....+.. .|.. +..++.+..+. .
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 99999552 1 23 5788888888765433322 2221 11222111111 0
Q ss_pred CHHHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594 206 NVELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (422)
Q Consensus 206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (422)
..+.+++.+.. .++.+|++.......|.+.+ .+++++||+. |+++|+||++..|...+.... ...++..--
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv~PD 323 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNIKPD 323 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCCCCc
Confidence 12456666631 35778888877777899888 7888888887 999999999988854333221 111111112
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
+.+|+|.+| .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+-.+..++.+++.++|.+
T Consensus 324 ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~ 402 (504)
T PLN02760 324 LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQD 402 (504)
T ss_pred EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 456799987 56 5899999999999887531 234778899998888888632110145555666666666
Q ss_pred HHcc---CCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594 348 LLKD---VPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 410 (422)
Q Consensus 348 ~L~~---~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 410 (422)
.|++ .+.+.-....|.++.+++.+... ...+.+.+.++||.+.+.. +.+||+.. +.++
T Consensus 403 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~lrl~Ppl~it~ee 477 (504)
T PLN02760 403 GIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-----DNIMMSPPLIITPEE 477 (504)
T ss_pred HHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----CEEEEECCCCCCHHH
Confidence 6554 33322234567777777742111 4457788889999998743 57899965 4455
Q ss_pred HHHHHHHHh
Q 014594 411 TDALMECLM 419 (422)
Q Consensus 411 ~~~l~~al~ 419 (422)
++++.++++
T Consensus 478 id~~~~~l~ 486 (504)
T PLN02760 478 VDELISIYG 486 (504)
T ss_pred HHHHHHHHH
Confidence 555555554
No 289
>PLN03032 serine decarboxylase; Provisional
Probab=99.74 E-value=1.5e-15 Score=146.43 Aligned_cols=275 Identities=13% Similarity=0.005 Sum_probs=189.9
Q ss_pred hHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC
Q 014594 131 SRRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i--~~~~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d 206 (422)
..++++.+++++|.+++++ ++|+|+|+++..++.... .++..|+++.-.|......++..|.++..||.+.++.+|
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id 147 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEID 147 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCc
Confidence 4578888899999988877 999999999988877543 245678889889988889999999998889988888999
Q ss_pred HHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-----CeEEEccCCccccC--CC-chhhhhhcCCcE
Q 014594 207 VELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE-SRMEWVKKHDNL 275 (422)
Q Consensus 207 ~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-----~~li~Deay~~~~~--~~-~~~~~~~~~~~~ 275 (422)
+++|++++.+. ++.+++++..+|+||.+-|.+++.++++. | +++++|.+|..+.. .. .....+ ..+.+
T Consensus 148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vD 226 (374)
T PLN03032 148 YDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIG 226 (374)
T ss_pred HHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC-CcCCc
Confidence 99999999742 57788888999999999999999999986 4 58999999975421 10 000011 11234
Q ss_pred EEEccChhhhccccccceeeecCHHHHHHHHHhcCC---------CCCcHH---HHHHHHHHccCChHHHHHHHHHHHHH
Q 014594 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---------YNVSVA---AEVAACAALQNPIYLEVKEALIKERE 343 (422)
Q Consensus 276 i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~---------~~~~~~---~~~aa~~~L~~~~~~~~~~~~~~~~~ 343 (422)
-+..|.+|..+ ....+|.++.+.+.++.+...... .+-+.. ...+....+....+.++.++..+..+
T Consensus 227 Sis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~ 305 (374)
T PLN03032 227 SVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAH 305 (374)
T ss_pred EEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 56678899665 345689999987776655321111 111222 33333333333455558888889999
Q ss_pred HHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh---hhHHHHHHHHhh
Q 014594 344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP---EHTDALMECLMH 420 (422)
Q Consensus 344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~---~~~~~l~~al~~ 420 (422)
++.+.|++.++.....+..+.+.++-| +.+. + .+|..+... .+.+||.+... +..|+|.+.|++
T Consensus 306 ~l~~~l~~~~~~~~~~p~~~~V~f~~~---~~~~----~-~~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 306 YLKDRLTEAGLTCRLNELSSTVVFERP---MDEA----F-IKKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred HHHHHHHhCCCcEEECCCceEEEEcCC---CcHh----H-hheeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 999999988765555566666666654 1121 2 245555542 35899998753 334555554443
No 290
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=2.3e-15 Score=147.48 Aligned_cols=256 Identities=15% Similarity=0.007 Sum_probs=177.9
Q ss_pred hHHHHHHHHHHcCCCC-CCEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCC
Q 014594 131 SRRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSD 202 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~-~~i~~~~G~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~ 202 (422)
..++++.+++++|++. +..++++|+| .++.+++.++-. +||.|+++.-+|......+...|++++.++. +++
T Consensus 107 ~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~ 186 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDE 186 (444)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcC
Confidence 3478888888899852 4688888988 688888776542 5899999999999999999999999999983 567
Q ss_pred CCCCHHHHHHHhhcC--CCeEEEEeCCC-CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc-hh-hhhhcCCcEE
Q 014594 203 FSLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RM-EWVKKHDNLI 276 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~--~~~~i~l~~p~-NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~-~~~~~~~~~i 276 (422)
+.+|++++++++++. +..++++.+|+ .++|...+.++|.++|+. |+++|+|++|........ .. .......-.+
T Consensus 187 ~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~ 266 (444)
T TIGR03531 187 LTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDA 266 (444)
T ss_pred CCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCe
Confidence 899999999999731 55677777665 556688899999999887 999999999985331100 10 1111112257
Q ss_pred EEccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 277 VLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
++.|++|.+.++|+ .|.+++ ++++++.+.........+...+.+...++..+ ++.+ +.++..++++++.+.|+++.
T Consensus 267 vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~ 345 (444)
T TIGR03531 267 VVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLA 345 (444)
T ss_pred EEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999987775 444446 78888888765333334456676666666543 4445 88888899999999887752
Q ss_pred ---CCcccCCCceEEE--EEeC--CCCCHHHHHHHHHhCCc
Q 014594 354 ---FLNPYPSYSNFIL--CEVT--SGMDAKKLKDDLAKMGV 387 (422)
Q Consensus 354 ---~~~~~p~~~~f~~--~~~~--~~~~~~~~~~~L~~~gI 387 (422)
+..+.....|-+. +.+. .+.+...+-..|-.++|
T Consensus 346 ~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v 386 (444)
T TIGR03531 346 ERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRV 386 (444)
T ss_pred HhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence 1233333333333 3332 13467777777876665
No 291
>PRK07678 aminotransferase; Validated
Probab=99.74 E-value=4.3e-15 Score=148.00 Aligned_cols=324 Identities=15% Similarity=0.118 Sum_probs=200.5
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +... ..|+.+...+|.+.|++.++. .+.+++++++++|++.+
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A 121 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA 121 (451)
T ss_pred eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence 35678899998763 223 357888888765 2211 223444456788888888764 35899999999999999
Q ss_pred HHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC---------C---HHH
Q 014594 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL 209 (422)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~---------d---~~~ 209 (422)
++.... +| .+|+....+|++....+.. .|. .+..++.++.+.. | ++.
T Consensus 122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK07678 122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE 201 (451)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence 985321 23 5789888889765543332 111 1222332111111 1 233
Q ss_pred HHHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594 210 IADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (422)
Q Consensus 210 l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~ 279 (422)
+++.+. .+++.+|++.....-.|.+.+ .++++++|+. |+++|.||++..|...+.. ....+-.++++
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv--- 278 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII--- 278 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE---
Confidence 565563 256888988876666788775 3455666665 9999999999988643322 12222233333
Q ss_pred cChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF 346 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~ 346 (422)
+++|.+| .| +.+|.+++++++.+.+.. ...+|+.|+++.+++.+.|+. ++..+ ..+.-...++.|.
T Consensus 279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~ 357 (451)
T PRK07678 279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLK 357 (451)
T ss_pred Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 5689998 56 699999999999887753 234578889998888888763 33333 3333334444444
Q ss_pred HHHccCCCCcccCCCceEEEEEeCCC------CC---HHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEec---ChhhHH
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTSG------MD---AKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVG---KPEHTD 412 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~~------~~---~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~---~~~~~~ 412 (422)
+.+++++.+......|.++.+++... .+ ...+...|.++||++.+... +...+.+||+.. +.++++
T Consensus 358 ~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid 437 (451)
T PRK07678 358 EELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA 437 (451)
T ss_pred HHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHH
Confidence 44445554433456677777776311 11 35677888899999976432 233578999865 445555
Q ss_pred HHHHHHh
Q 014594 413 ALMECLM 419 (422)
Q Consensus 413 ~l~~al~ 419 (422)
++.++++
T Consensus 438 ~~~~~l~ 444 (451)
T PRK07678 438 FIVGTLK 444 (451)
T ss_pred HHHHHHH
Confidence 5555443
No 292
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.73 E-value=2.5e-15 Score=145.57 Aligned_cols=325 Identities=17% Similarity=0.159 Sum_probs=213.3
Q ss_pred CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-C---CC-CCCC-CCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-L---KF-PYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~---~~-~~~y-~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~ 160 (422)
+.+++.+|||.++.+.. ..+|.|.+|+.+ + .+ ...| +.....++-+.|.+.... ..+.+++++++++|++
T Consensus 52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E 131 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE 131 (447)
T ss_pred eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence 45688899999965433 468999999876 2 21 2333 223456777888887765 4678999999999999
Q ss_pred HHHHHh--cCCCCEEEEcCCCchhHHHHHHH-cC-------------CEEEEecCCCCC----CC--------CHHHHHH
Q 014594 161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKSDF----SL--------NVELIAD 212 (422)
Q Consensus 161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~~~----~~--------d~~~l~~ 212 (422)
.+++.- ......|+.....|++....+.. .| ..++.+|.+..+ .. ..+.+++
T Consensus 132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~ 211 (447)
T COG0160 132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER 211 (447)
T ss_pred HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence 999943 22346799888888754433321 11 125555532221 11 2344555
Q ss_pred Hhhc-----CCCeEEEEeCCCCccCcCCCHHHH----HHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEcc
Q 014594 213 AVER-----EKPKCIFLTSPNNPDGSIINDEDL----LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRT 280 (422)
Q Consensus 213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l----~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S 280 (422)
.+.. .++.++++...+.-.|.+.+.+.+ +++|+. |+++|+||++..|...+..... .+-.++++ +
T Consensus 212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv---t 288 (447)
T COG0160 212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV---T 288 (447)
T ss_pred HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE---E
Confidence 4432 357899999999999999876544 445555 9999999999999876643222 22223333 5
Q ss_pred ChhhhccccccceeeecCHHHHHHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCC
Q 014594 281 FSKRAGLAGLRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFL 355 (422)
Q Consensus 281 ~SK~~~~~G~r~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~ 355 (422)
++|.+| .|+.+|.+++++++.+... .....|..|+.+.+++.+.|+.-+-..+.++..+.-+++++.|.+ ++.+
T Consensus 289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~I 367 (447)
T COG0160 289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLI 367 (447)
T ss_pred eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCce
Confidence 789998 5999999999999888221 122347889999999999986321112555555666666666654 4433
Q ss_pred cccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 356 NPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 356 ~~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
--....|.++.+++-.. .-.+.+.+.+.++|+.+..++ ...+.+||.....-+.++++++++.|
T Consensus 368 gdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G--~~~nviRi~PPL~is~e~~d~~l~il 439 (447)
T COG0160 368 GDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG--PHGNVLRILPPLTISDEELDEGLDIL 439 (447)
T ss_pred ecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC--CCCcEEEEeCCcccCHHHHHHHHHHH
Confidence 33467788988887421 225678888899999888765 23589999976433335555555443
No 293
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.73 E-value=5.5e-15 Score=147.08 Aligned_cols=322 Identities=15% Similarity=0.162 Sum_probs=196.7
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCC--CCC-EEEeCCHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL 158 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~--~~~-i~~~~G~~~a 158 (422)
+.+++.+||+..+.. .+ ..+|++.+++.+ +.. .+ .++.+...+|-++|++..+.. ... +++++++++|
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 456788999988742 22 457889888876 221 11 134444567778888776522 134 4556999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCCC--------CH----HHHH
Q 014594 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA 211 (422)
Q Consensus 159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~--------d~----~~l~ 211 (422)
++.+++... ....+|+....+|++....+.. .| ..+..++..+.+.. +. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 999999432 2236799999999766544432 22 01233332211111 11 1233
Q ss_pred HHhhc-----CCCeEEEEeCCCCccCcC-CCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEc
Q 014594 212 DAVER-----EKPKCIFLTSPNNPDGSI-INDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR 279 (422)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~-~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~ 279 (422)
+.+.. .++.++++....+..|.+ .+.+.++++.+. |+++|.||+|..|...+.... ..+..+++++
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~-- 272 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV-- 272 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--
Confidence 33321 457888888665555554 677777766553 999999999999865443222 2222333333
Q ss_pred cChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC
Q 014594 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP 353 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~ 353 (422)
++|.++ .|+++|+++++++ ++.+.. ....|+.++++++++.++|+.-+-.+..++.+++.+++.+.|++ ++
T Consensus 273 -~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 349 (442)
T TIGR00709 273 -MSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP 349 (442)
T ss_pred -Eccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 799998 4899999999988 444421 22357889999999999985311111555666667777666654 44
Q ss_pred CCcccCCCceEEEEEeCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594 354 FLNPYPSYSNFILCEVTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 416 (422)
Q Consensus 354 ~~~~~p~~~~f~~~~~~~~~--------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 416 (422)
.+.-....|.++.+++.+.. -...+...+.++||++.+... ..+.+|+..+ +.++++++.+
T Consensus 350 ~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~~~~~ 427 (442)
T TIGR00709 350 CIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRLLCPITIDQEECEEGIS 427 (442)
T ss_pred CeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCCCCHHHHHHHHH
Confidence 44334567788877774211 134567778899999976432 2478999876 3444444444
Q ss_pred HHh
Q 014594 417 CLM 419 (422)
Q Consensus 417 al~ 419 (422)
+++
T Consensus 428 ~l~ 430 (442)
T TIGR00709 428 RFK 430 (442)
T ss_pred HHH
Confidence 443
No 294
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=2.8e-15 Score=148.94 Aligned_cols=320 Identities=18% Similarity=0.161 Sum_probs=200.9
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
..+++.++|+..+.. .+ ..+|++.+++.+ +... ..|+.+...+|.+.|++..+-. .+.+++++++++|++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e 129 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE 129 (441)
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 356788999987743 33 346888888876 2211 1233444567777777776422 368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCC----C-CC--------HHHHH
Q 014594 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDF----S-LN--------VELIA 211 (422)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~----~-~d--------~~~l~ 211 (422)
.+++.-. ...++|+....+|++....+.. .|. .+..++.++.+ + -| ++.++
T Consensus 130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 9998431 2236788888888765543322 121 12233321111 1 11 23455
Q ss_pred H-Hhh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594 212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (422)
Q Consensus 212 ~-~i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~ 279 (422)
+ .++ ..++.+|++.......|...+ .+++.++|+. |+++|+||++..|...+.. ....+..++++
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv--- 286 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII--- 286 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE---
Confidence 5 222 246788888877777899888 7778888876 9999999999987543322 11222223333
Q ss_pred cChhhhccccccceeeecCHHHHHHHHH-hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCC
Q 014594 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPF 354 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~ 354 (422)
+|+|.++ .|+++|++++++++.+.+.. ....|+.++++++++.++|+.-+- +..++.+++.++|.+.|++ ++.
T Consensus 287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~ 364 (441)
T PRK05769 287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEF 364 (441)
T ss_pred EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4789998 78999999999988753321 223466788998888888864322 4555666666666666654 443
Q ss_pred CcccCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 355 LNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 355 ~~~~p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+.-....|.++.+.+.+. .....+.+.+.++||.+.+.. .+.+|++.. +.++++++.++++
T Consensus 365 ~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 365 IGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG----KSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred eeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 322345567777777321 113457777889999997643 378999976 3445555555443
No 295
>PLN02271 serine hydroxymethyltransferase
Probab=99.73 E-value=5.7e-15 Score=145.52 Aligned_cols=318 Identities=16% Similarity=0.097 Sum_probs=208.4
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHHH----HHHHHHHcCCCC----CCEEEeCCHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD 156 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~------~~~-~~~l----r~~la~~~~~~~----~~i~~~~G~~ 156 (422)
.+-|.|-..||-. ++.+++++... .+..+|| ... ..++ .+...+.|+.+. .+|..- +++
T Consensus 148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs 224 (586)
T PLN02271 148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT 224 (586)
T ss_pred hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence 4458888888866 58889998752 2333343 221 2233 344445678766 566666 556
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHHH---------HHHcCCEEEEec--C-CCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~g~~~~~v~--~-~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
.|+..++.++++|||+|+..+..|.++... +...|..+..++ . +++..+|.+++++.....+||+|++
T Consensus 225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 677788888999999999988777543221 233565544444 4 3456899999999665589999998
Q ss_pred eCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH---
Q 014594 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--- 300 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--- 300 (422)
..-.+| ..+|.+++.+||+. |+++++|.+|....-.......... ...++..|.+|.+ .|-|.|.++.+++
T Consensus 305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~ 379 (586)
T PLN02271 305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSL--RGPRGGIIFYRKGPKL 379 (586)
T ss_pred Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccC--CCCCceEEEecccccc
Confidence 877787 88999999999997 9999999999854321111111111 2458899999975 5667788887653
Q ss_pred -----------------HHHHHHHhcCCC---CCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcc
Q 014594 301 -----------------IIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNP 357 (422)
Q Consensus 301 -----------------~~~~l~~~~~~~---~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 357 (422)
+.+++.....|. ++.....++...+++ .++|.+..+++.++.+.|.+.|.+.|+..+
T Consensus 380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv 459 (586)
T PLN02271 380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLV 459 (586)
T ss_pred cccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEe
Confidence 455555444442 111112333334444 356645777888999999999988875544
Q ss_pred cC-CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 358 YP-SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 358 ~p-~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
.. .+...+++++.+ +.+...+.+.|.+.||.+. |++. +..++.|||+.. .+++++++.+.+.+
T Consensus 460 ~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~ 536 (586)
T PLN02271 460 TGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLR 536 (586)
T ss_pred eCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHH
Confidence 32 233457788853 5678888888889999996 3332 334678999863 35566666665554
No 296
>PRK06105 aminotransferase; Provisional
Probab=99.72 E-value=4.5e-15 Score=148.11 Aligned_cols=319 Identities=12% Similarity=0.101 Sum_probs=197.3
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +... . .|..+...++.+.|++.++.+-+.+++++++++|++
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 45678899998773 233 457888888876 2211 1 233334567888888877544568999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC-------------C
Q 014594 161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N 206 (422)
Q Consensus 161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-------------d 206 (422)
.+++... . +| .+|+....+|++....+.. .|. .+..++.+..+.. .
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence 9999531 1 23 5788888888755433211 111 1122221111111 1
Q ss_pred HHHHHHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEE
Q 014594 207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI 276 (422)
Q Consensus 207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i 276 (422)
.+++++.+. ..++.+|++.......|...+ .+++++||+. |+++|+||++..|...+... ...+..++
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD-- 281 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD-- 281 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC--
Confidence 356777663 245788888877777788876 5666677766 99999999998875433221 11222233
Q ss_pred EEccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF 346 (422)
Q Consensus 277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~ 346 (422)
+.+++|.++ .| +.+|.+++++++.+.+... ..+|+.|+++.+++.+.|+.-+-.+..++.++..++|.
T Consensus 282 -i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~ 359 (460)
T PRK06105 282 -ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQ 359 (460)
T ss_pred -eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 336789987 56 6899999999998877531 23467888888888777753110014445555555555
Q ss_pred HHHcc---CCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594 347 KLLKD---VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 409 (422)
Q Consensus 347 ~~L~~---~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 409 (422)
+.|++ ++.+.-....|.+.-+++... .+ +..+...+.++||.+.+.. +.+|++.. +.+
T Consensus 360 ~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~~ 434 (460)
T PRK06105 360 ARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-----DTLAFCPPLIITAA 434 (460)
T ss_pred HHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCccCHH
Confidence 55544 443333446677776766311 01 2467777889999998742 58999866 344
Q ss_pred hHHHHHHHH
Q 014594 410 HTDALMECL 418 (422)
Q Consensus 410 ~~~~l~~al 418 (422)
+++++.+++
T Consensus 435 eid~~~~~l 443 (460)
T PRK06105 435 QVDEMVDRF 443 (460)
T ss_pred HHHHHHHHH
Confidence 444444444
No 297
>PRK06062 hypothetical protein; Provisional
Probab=99.72 E-value=7.5e-15 Score=146.17 Aligned_cols=320 Identities=14% Similarity=0.106 Sum_probs=200.0
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +... ..|..+...+|-+.|++...-..+.+++++++++|.+.+
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 128 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA 128 (451)
T ss_pred ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence 45678899998874 333 357888888876 2211 233444456788888887753356999999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-----------EEEEecCCCCCC------CC-------HHHHHHHhh
Q 014594 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE 215 (422)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~v~~~~~~~------~d-------~~~l~~~i~ 215 (422)
++.-. ....+|+....+|++....+.. .|. .+..++.+..+. -| ++.+++.++
T Consensus 129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 208 (451)
T PRK06062 129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE 208 (451)
T ss_pred HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence 99432 2236788888888765543332 111 112222111111 12 577777775
Q ss_pred c---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhh
Q 014594 216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA 285 (422)
Q Consensus 216 ~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~ 285 (422)
. .++.+|++.......|.+.+ .++++++|+. |+++|+||++..|...+.. ....+-.++ +.+|+|.+
T Consensus 209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD---i~t~gK~l 285 (451)
T PRK06062 209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD---LITFAKGV 285 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC---eeeechhh
Confidence 2 45778888877777898888 7777788876 9999999999987543322 122222233 33679998
Q ss_pred ccccc-cceeeecCHHHHHHHHHh----cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHH-HHHHHHHc----cCCCC
Q 014594 286 GLAGL-RVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQNPIYLEVKEALIKER-ERLFKLLK----DVPFL 355 (422)
Q Consensus 286 ~~~G~-r~G~i~~~~~~~~~l~~~----~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~-~~l~~~L~----~~~~~ 355 (422)
+ .|+ .+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+-.+..++.++.. +++.+.|+ +.+.+
T Consensus 286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v 364 (451)
T PRK06062 286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSV 364 (451)
T ss_pred h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 7 674 899999999998877532 1247778888888888875311001333333333 24444443 34433
Q ss_pred cccCCCceEEEEEeCCC------C--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 356 NPYPSYSNFILCEVTSG------M--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 356 ~~~p~~~~f~~~~~~~~------~--------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
......|.++.+++... . ....+.+.|+++||++.+. .+.+||+.. +.++++++.+++
T Consensus 365 ~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~l 439 (451)
T PRK06062 365 GEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAIL 439 (451)
T ss_pred EeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHHH
Confidence 33445677766766311 0 1346778888999998763 367999874 445555555544
Q ss_pred h
Q 014594 419 M 419 (422)
Q Consensus 419 ~ 419 (422)
+
T Consensus 440 ~ 440 (451)
T PRK06062 440 D 440 (451)
T ss_pred H
Confidence 3
No 298
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.72 E-value=2.4e-15 Score=148.40 Aligned_cols=319 Identities=14% Similarity=0.145 Sum_probs=198.3
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.++|+..+. ..+ ..+|++.+++.+ +.. .. .+..+...+|.+.|++..+...+.+++++++++|++.
T Consensus 39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~ 118 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV 118 (428)
T ss_pred eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 34678899998763 333 356888888875 321 11 1233345667777777765444799999999999999
Q ss_pred HHHHhcC------C-CCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCC-C-----CCCHHHHHHHh
Q 014594 162 IMRCVLD------P-GDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSD-F-----SLNVELIADAV 214 (422)
Q Consensus 162 ~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~-~-----~~d~~~l~~~i 214 (422)
+++.... . ..+|+....+|++....+... +. .+..++.... + .-|++.+++.+
T Consensus 119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l 198 (428)
T PRK07986 119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM 198 (428)
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence 9985321 2 367999999997644332221 21 1122221111 1 12567888877
Q ss_pred hc--CCCeEEEEeCC-CCccCcCC-CH---HHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhh
Q 014594 215 ER--EKPKCIFLTSP-NNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~~~-~~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~ 284 (422)
.+ .+..+|++... +.-.|... +. +++.++|+. |+++|+||++..|...+... ...+..++++ +++|.
T Consensus 199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~---t~gK~ 275 (428)
T PRK07986 199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL---CLGKA 275 (428)
T ss_pred HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE---Eechh
Confidence 53 35667777753 55556544 43 455666665 99999999998774333221 1122223333 48999
Q ss_pred hcccc-ccceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---C
Q 014594 285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---P 353 (422)
Q Consensus 285 ~~~~G-~r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 353 (422)
++ .| +.+|.+++++++.+.+... ..+|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.|+++ +
T Consensus 276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~ 354 (428)
T PRK07986 276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAP 354 (428)
T ss_pred hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 97 77 5889889999999888642 23577888888888887753110014455555556666666543 3
Q ss_pred CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 354 FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 354 ~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
.+.-....|.++.+.+....+...+.+.|.++||++.+.+ +.+|+... +.++++++.+++
T Consensus 355 ~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g-----~~i~~~Ppl~it~~ei~~~~~~l 417 (428)
T PRK07986 355 MVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG-----KLIYLMPPYIILPEQLQRLTAAV 417 (428)
T ss_pred CEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHH
Confidence 2222345677777887644456788899999999998753 68999865 344444444444
No 299
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.71 E-value=4.6e-15 Score=147.43 Aligned_cols=320 Identities=17% Similarity=0.172 Sum_probs=203.1
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +. +.. .++.+...+|.+.|++.+....+.+++++++++|++.
T Consensus 45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~ 124 (445)
T PRK09221 45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT 124 (445)
T ss_pred eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34678899998773 233 357888888775 22 211 2334445678888888775334689999999999999
Q ss_pred HHHHhc------C-C-CCEEEEcCCCchhHHHHHHHc-C------------CEEEEecCCC-C----CCC--------CH
Q 014594 162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-D----FSL--------NV 207 (422)
Q Consensus 162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~-~----~~~--------d~ 207 (422)
+++... . + ..+|+....+|++....+... | ..+..+|... . +.. ..
T Consensus 125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
T PRK09221 125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA 204 (445)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence 998432 1 1 257998899997654332211 1 0122232111 0 111 13
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+.+++.+.. .++.+|++.......|...+ .+++.++|+. |+++|+||++..|...+.. ....+..++
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD--- 281 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD--- 281 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC---
Confidence 566776642 45778888888888899888 7888888887 9999999999877543322 112222223
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
+.+++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+.-+-.+..++.++..+++.+
T Consensus 282 i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~ 360 (445)
T PRK09221 282 IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFED 360 (445)
T ss_pred EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 236789987 55 679999999999887643 1234677888888888777532111255667777777777
Q ss_pred HHccC---CCCcccCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594 348 LLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 416 (422)
Q Consensus 348 ~L~~~---~~~~~~p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 416 (422)
.|+++ +.+.-....|.+..+++.. ......+.+.|.++||.++.+. +.+||+.. +.++++++.+
T Consensus 361 ~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~lr~~Ppl~~t~~eid~~~~ 435 (445)
T PRK09221 361 AVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG-----DTIALSPPLIIEKAQIDELVD 435 (445)
T ss_pred HHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-----CEEEEECCccCCHHHHHHHHH
Confidence 77664 3222234456666666532 1124578888889999998643 68999965 4455555555
Q ss_pred HHh
Q 014594 417 CLM 419 (422)
Q Consensus 417 al~ 419 (422)
+++
T Consensus 436 ~l~ 438 (445)
T PRK09221 436 ALG 438 (445)
T ss_pred HHH
Confidence 544
No 300
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.71 E-value=7.1e-15 Score=145.96 Aligned_cols=320 Identities=18% Similarity=0.180 Sum_probs=200.0
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +. +.. .++.+...++.+.|++.+.-..+.+++++++++|++.
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 121 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT 121 (442)
T ss_pred eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34577899998773 223 457888888875 22 111 2233445577778877764334689999999999999
Q ss_pred HHHHhcC-------C-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCC-----CCC--------CH
Q 014594 162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV 207 (422)
Q Consensus 162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~--------d~ 207 (422)
+++.... + ..+|+....+|++....+.. .| ..+..+|.... +.. .+
T Consensus 122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 201 (442)
T PRK13360 122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA 201 (442)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence 9884321 2 25799999999765432221 11 11222332110 111 14
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+.+++.+.. .++.+|++.......|...+ .++++++|+. |+++|+||++..|...+.. ....+..+++
T Consensus 202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi-- 279 (442)
T PRK13360 202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDL-- 279 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCce--
Confidence 577777742 45678888877888899988 7888888886 9999999999877533322 1122222222
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
.+|+|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.++|+.-+-....++.+++.+++.+
T Consensus 280 -vt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~ 357 (442)
T PRK13360 280 -LTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWED 357 (442)
T ss_pred -eeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 36799987 56 7899999999998876531 234677888888888887531100155566666667767
Q ss_pred HHccC---CCCcccCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594 348 LLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 416 (422)
Q Consensus 348 ~L~~~---~~~~~~p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 416 (422)
.|+++ +.+......|.+.-+.+.. .....++.+.|.++||++.... +.+||+.. +.+++|++.+
T Consensus 358 ~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-----~~lr~~Ppl~~t~~eid~~~~ 432 (442)
T PRK13360 358 ALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-----DILALSPPLIIEEAQIDELFD 432 (442)
T ss_pred HHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-----CEEEEeCCCccCHHHHHHHHH
Confidence 66654 2222223445555555531 1124577788889999998643 57999965 3445555555
Q ss_pred HHh
Q 014594 417 CLM 419 (422)
Q Consensus 417 al~ 419 (422)
+++
T Consensus 433 ~l~ 435 (442)
T PRK13360 433 ILA 435 (442)
T ss_pred HHH
Confidence 544
No 301
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.71 E-value=2.3e-15 Score=145.36 Aligned_cols=300 Identities=15% Similarity=0.184 Sum_probs=197.4
Q ss_pred CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+++.++|+..+. ..+ ..+|++.+++.+ +. + ...|+.+...++.++++++.+. +.+++++++++|++.++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al 98 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL 98 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence 4577899998764 333 356888888875 22 1 1235555567889999988764 58999999999999999
Q ss_pred HHh-cCCC-CEEEEcCCCchhHHHHHHHc-C-------CE-----EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 164 RCV-LDPG-DKIVDCPPTFTMYEFDAAVN-G-------AA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 164 ~~l-~~~g-d~Vl~~~p~y~~~~~~~~~~-g-------~~-----~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+.. ..+| ++|+....+|+.....+... + .. +..+| + .|++.+++.+. .++++|++.+.+
T Consensus 99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~----~-~d~~~l~~~i~-~~~aAvivEpi~ 172 (364)
T PRK04013 99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP----F-NDVEAAKEAIT-KETAAVIFEPIQ 172 (364)
T ss_pred HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec----C-CCHHHHHHHhc-CCcEEEEEcCCc
Confidence 954 2245 88999999998654433221 1 11 11122 1 26889999886 689999988777
Q ss_pred CccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 229 NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
...|... + .++++++|+. |+++|+||++..+ ..+... ...+-.++++ +++|.++ .|+.+|.++.+.++
T Consensus 173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~~~~~~ 247 (364)
T PRK04013 173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV---TMGKGIG-NGVPVSLTLTNFDV 247 (364)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEE---Eeccccc-CCceeEEEEecccc
Confidence 7667655 4 5677777876 9999999999987 433322 2223334444 4589998 68999999988775
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594 302 IEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~ 378 (422)
.. .....+|+.++++.+++.+.|+- ++..+ +.++. + ..+.. +.+.-....|.++-+++.+ ....+
T Consensus 248 ~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~---~~~~~---l-~~l~~-~~v~~vRG~Gl~~gve~~~--~~~~i 315 (364)
T PRK04013 248 ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVE---KAGEK---F-IEIKG-ERVVTTRGRGLMIGIVLKK--PVGKY 315 (364)
T ss_pred cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH---HHHHH---H-HHhcc-CcceeeeeCcEEEEEEeCC--cHHHH
Confidence 21 12334577889988888888753 33333 22221 2 22222 3333345778888888853 36778
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+.+.++|+.+.+.. .+.+|+.....-+.+++.+++++
T Consensus 316 ~~~~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~ 353 (364)
T PRK04013 316 VEELQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSA 353 (364)
T ss_pred HHHHHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHH
Confidence 888999999997643 47899997632222444444443
No 302
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.71 E-value=2.9e-16 Score=143.66 Aligned_cols=271 Identities=21% Similarity=0.239 Sum_probs=166.6
Q ss_pred hHHHHHHHHHHc---C---CCCCCEEEeCCHHHHHHHHHHHhcCC----C--CEEEEcCCCchhHHHHHHHcCCEEEEec
Q 014594 131 SRRLRAALAKDS---G---LESDHILVGCGADELIDLIMRCVLDP----G--DKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (422)
Q Consensus 131 ~~~lr~~la~~~---~---~~~~~i~~~~G~~~al~~~~~~l~~~----g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 198 (422)
..+|++.|.+++ | .+...|++++|+++++++++.+|... + -.|+...|.|+.|......+.-......
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 578999999887 2 24558999999999999999998432 1 4699999999999987655433333322
Q ss_pred -CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEE
Q 014594 199 -RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (422)
Q Consensus 199 -~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i 276 (422)
....|. + . ....+-+=++++||||.|.+ .+.+++- +..+|.|-+|..=.+. ++.. ..+.+|
T Consensus 125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyT--pI~~--~aD~Di 187 (363)
T PF04864_consen 125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYT--PITA--PADHDI 187 (363)
T ss_dssp EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-----S---B--SE
T ss_pred ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeeccccc--ccCC--CCCCce
Confidence 112221 1 0 01234455778999999987 3445554 6678999999843222 2222 234458
Q ss_pred EEccChhhhccccccceeeecC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-----------ChHHH-HHHHHHHH
Q 014594 277 VLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-----------PIYLE-VKEALIKE 341 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-----------~~~~~-~~~~~~~~ 341 (422)
.+.|+||.-|-+|-|+||.++. +++.+++.+... ..+++.=+|.-+..+|+. .+..+ -++.++++
T Consensus 188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~R 267 (363)
T PF04864_consen 188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRER 267 (363)
T ss_dssp EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHH
T ss_pred EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHH
Confidence 8999999999999999999985 567777765543 466777777777766652 13566 78888999
Q ss_pred HHHHHHHHccCCCCc--------------ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec
Q 014594 342 RERLFKLLKDVPFLN--------------PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG 406 (422)
Q Consensus 342 ~~~l~~~L~~~~~~~--------------~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~ 406 (422)
.++|.+.+..-+-.. +......|.|++.... +.++..+.|++.||..+.|..+ ....++|||+-
T Consensus 268 W~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml 346 (363)
T PF04864_consen 268 WEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVLREAKIITRSGVLFGADSRYVRLSML 346 (363)
T ss_dssp HHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS
T ss_pred HHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHHHhCCcccCCCCccCCCCCeEEEecc
Confidence 999999987643111 1223456999999632 2345667777999999998874 45689999976
Q ss_pred C-hhhHHHHHHHHh
Q 014594 407 K-PEHTDALMECLM 419 (422)
Q Consensus 407 ~-~~~~~~l~~al~ 419 (422)
. .++.+.|.+-|.
T Consensus 347 ~~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 347 KRDDDFDQLLERLS 360 (363)
T ss_dssp S-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 5 444455555444
No 303
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.71 E-value=6.9e-15 Score=139.00 Aligned_cols=215 Identities=19% Similarity=0.153 Sum_probs=163.7
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (422)
++++|....+++.+++..|. .+.++.++|..|+..++..++..|+.|++....|..... ....+|++...++.
T Consensus 73 r~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~- 149 (409)
T KOG0053|consen 73 RSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV- 149 (409)
T ss_pred cCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-
Confidence 34566678899999999985 458888999999999999999999999999999975443 34457888887763
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
-|++++++++. +++++|++.+|.||+..+.+.+++.++++. |+++|+|+.+.....- .++ ..+.+|++.
T Consensus 150 ----~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~h 219 (409)
T KOG0053|consen 150 ----DDLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVH 219 (409)
T ss_pred ----hhHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEE
Confidence 35789999997 589999999999999999999999999998 9999999999854321 111 234569999
Q ss_pred cChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|.+|.+|..+ +=.|.++.+ +++.+++...+.. ++++++.......-| ..+. +.++..++...+.+.|+..+.
T Consensus 220 SaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl---ktl~lRi~~~~ena~~~A~~Le~~~~ 296 (409)
T KOG0053|consen 220 SATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGL---KTLHLRINKHSENALKIALLLEAHPK 296 (409)
T ss_pred eeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCc---chhhhhHHHHHHHHHHHHHHhhhCCc
Confidence 9999876322 446777775 8888888876654 667776655433333 3344 666677777777788877654
Q ss_pred C
Q 014594 355 L 355 (422)
Q Consensus 355 ~ 355 (422)
+
T Consensus 297 v 297 (409)
T KOG0053|consen 297 V 297 (409)
T ss_pred e
Confidence 4
No 304
>PRK06149 hypothetical protein; Provisional
Probab=99.70 E-value=6.5e-15 Score=159.27 Aligned_cols=324 Identities=15% Similarity=0.126 Sum_probs=204.6
Q ss_pred CCCCCCeEEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
..+++.++|+.++...++ .+|+|.+++.+ +. ...+|..+...+|.++|++.+.-..+.++++++|++|++.+++.
T Consensus 581 D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl 660 (972)
T PRK06149 581 DMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRL 660 (972)
T ss_pred eCCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHH
Confidence 345788999988876666 78999988865 22 22223333456788888888753346899999999999999983
Q ss_pred h--cCCCCEEEEcCCCchhHHHHHHHc-C-----C--------EEEEecCCCC----CC-CC-----HHHHHHHhh----
Q 014594 166 V--LDPGDKIVDCPPTFTMYEFDAAVN-G-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE---- 215 (422)
Q Consensus 166 l--~~~gd~Vl~~~p~y~~~~~~~~~~-g-----~--------~~~~v~~~~~----~~-~d-----~~~l~~~i~---- 215 (422)
. .....+|+...-+|++....+... + . .+..++..+. |. .| .+.+++.++
T Consensus 661 Ar~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 661 AWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred HHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 2 122356888888887544222110 0 0 1222322111 11 12 234333332
Q ss_pred -cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhc
Q 014594 216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 216 -~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~ 286 (422)
..++.+|++.......|.+.+ .+++.++|+. |+++|+||++..|...+... ...+-.++++ +++|.+|
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv---t~gK~lg 817 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII---TMAKGMG 817 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE---Eeccccc
Confidence 145778888776766788887 6777778877 99999999998876444321 1122223333 6799998
Q ss_pred cccccceeeecCHHHHHHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccC
Q 014594 287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYP 359 (422)
Q Consensus 287 ~~G~r~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p 359 (422)
.|+.+|.+++++++.+.+.. ....++.|+++.+++.+.|+--+-.+..++.++.-+++.+.|++ .+.+....
T Consensus 818 -~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr 896 (972)
T PRK06149 818 -NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVH 896 (972)
T ss_pred -CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 78999999999999887753 12346778998888888875311001444555555555555543 45444456
Q ss_pred CCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 360 SYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 360 ~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
..|.|+-+++... .....+.+.|+++||.+.+... ..+.+||... +.++.+++.+++++
T Consensus 897 G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~ 966 (972)
T PRK06149 897 GMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDR 966 (972)
T ss_pred ecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 7788888877311 1145678888899999987532 2478999865 45555555555543
No 305
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.70 E-value=3.9e-14 Score=140.47 Aligned_cols=318 Identities=14% Similarity=0.092 Sum_probs=198.3
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
..+++.+||+..+.. .+ ..+|++.+++.+ +... ..++.+...++.++|.+... ..+.+++++++++|++.+++
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk 127 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR 127 (428)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence 346788999977743 23 357889888876 3221 23455556678888887765 34689999999999999999
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHHH-cCCEEEE--------ec--CCCC----CCCCHHHHHHHhhc--CCCeEEEEe
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NGAAVVK--------VP--RKSD----FSLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~--------v~--~~~~----~~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
.-. ....+|+....+|++....+.. .|..... ++ ...+ ...|++.+++.+.+ .++.+|++.
T Consensus 128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 432 2236788888888765443322 2211110 00 0000 01278899888853 357788888
Q ss_pred CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
......|.+.+ .+++.++|+. |+++|+||++..|. .... ....+..+++ -+++|.++ .|+.+|.++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~a~~~~gv~PDi---vt~gK~lg-gG~Pi~av~~~ 282 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGGAQDLLGVEPDL---TALGKIIG-GGLPIGAYGGR 282 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcchhhHHhCCCCCe---eeechhhc-CCCceeEEeEH
Confidence 77787898887 6777888876 99999999999873 2211 1122222333 36799997 78999999999
Q ss_pred HHHHHHHHH-----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCc-ccCCCceEEEEE
Q 014594 299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLN-PYPSYSNFILCE 368 (422)
Q Consensus 299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~f~~~~ 368 (422)
+++.+.+.. ....|+.|+++.+++.+.|+.-+-.+..++.+++-+++.+.|++ ++.+. +....+ ++.+.
T Consensus 283 ~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~ 361 (428)
T PRK12389 283 KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVY 361 (428)
T ss_pred HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEE
Confidence 999888742 12346788998888888876311101444555555555555543 45332 223344 33344
Q ss_pred eCC-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594 369 VTS-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 419 (422)
Q Consensus 369 ~~~-~~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 419 (422)
+.. .. + ...+.+.|.++||.+.+... +.+.+++. +.++++++.++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~l~~t~e~id~~~~~l~ 422 (428)
T PRK12389 362 FTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLTTAHTEEDIEETLEAVD 422 (428)
T ss_pred EeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC----CCeeecCCCCHHHHHHHHHHHH
Confidence 421 10 1 35677888899999987532 23445544 3444555555554
No 306
>PRK07482 hypothetical protein; Provisional
Probab=99.70 E-value=1.4e-14 Score=144.69 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=197.3
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
+.+++.+||+.++... + ..+|++.+++.+ +... + .++.....+|-+.|++....+.+.+++++++++|++
T Consensus 46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve 125 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE 125 (461)
T ss_pred ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 4567889999887432 2 357888888876 3221 1 233334567777787776544578999999999999
Q ss_pred HHHHHhc------C-C-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC-------------CC
Q 014594 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN 206 (422)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-------------~d 206 (422)
.+++... . + ..+|+....+|++....+.. .| ..+..++....+. .+
T Consensus 126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (461)
T PRK07482 126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC 205 (461)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence 9999542 1 2 25788888889765433221 11 0112222111000 13
Q ss_pred HHHHHHHhhc---CCCeEEEEeCCCCccCcCCC-HHHH---HHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEE
Q 014594 207 VELIADAVER---EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI 276 (422)
Q Consensus 207 ~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~-~e~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i 276 (422)
++.+++.+.+ +++.+|++.......|.+.+ .+-+ ++||+. |+++|.||++..|...+.. ....+..++++
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv 285 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI 285 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence 5777877742 45788888876666787754 4444 445555 9999999999988643322 22222334444
Q ss_pred EEccChhhhccccc-cceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERE 343 (422)
Q Consensus 277 ~~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~ 343 (422)
+ ++|.++ .|+ .+|.+++.+++.+.+.. ...+|+.|+++.+++.+.|+. ++ ..++.++..+
T Consensus 286 ~---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~ 358 (461)
T PRK07482 286 T---VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN---LVGNAAEVGA 358 (461)
T ss_pred E---Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 3 589987 675 89999999998877652 223477899999888888753 23 3344445555
Q ss_pred HHHHHH----ccCCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--
Q 014594 344 RLFKLL----KDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-- 406 (422)
Q Consensus 344 ~l~~~L----~~~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-- 406 (422)
++.+.| ++++.+.-....|.++.+++... .+ ...+...+.++||++++.. ..+.+|+..+
T Consensus 359 ~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~---~~~~i~~~Ppl~ 435 (461)
T PRK07482 359 YFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP---HGDILGFAPPLV 435 (461)
T ss_pred HHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---CCCEEEEeCCCC
Confidence 555555 44554433456777777877421 11 3567788889999987532 1368999855
Q ss_pred -ChhhHHHHHHHH
Q 014594 407 -KPEHTDALMECL 418 (422)
Q Consensus 407 -~~~~~~~l~~al 418 (422)
+.++++++.+++
T Consensus 436 it~~ei~~~~~~l 448 (461)
T PRK07482 436 LTRAEADEIVAIA 448 (461)
T ss_pred CCHHHHHHHHHHH
Confidence 344444444443
No 307
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=1.9e-14 Score=142.11 Aligned_cols=319 Identities=12% Similarity=0.124 Sum_probs=197.5
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +. +.. .+..+...+|.+.|++..+-..+.+++++++++|++.
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~ 115 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV 115 (422)
T ss_pred ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 34678899998763 333 357888888875 22 111 1233345678888888765334699999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCCCCC-------HHHHHH
Q 014594 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD 212 (422)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~d-------~~~l~~ 212 (422)
+++.-.. ++ .+|+....+|++....+.. .+. ....+|.......+ .+.+++
T Consensus 116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL 195 (422)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence 9984321 23 5789999999764433322 111 12223322111112 234555
Q ss_pred HhhcCCCeEEEEeCC-CCccCcCCC-HHH---HHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhh
Q 014594 213 AVEREKPKCIFLTSP-NNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 213 ~i~~~~~~~i~l~~p-~NPtG~~~~-~e~---l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~ 284 (422)
.+. +++.+|++... +.-.|...+ .+- ++++|+. |+++|+||++..|...+.... ..+..++++ +++|.
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~---t~gK~ 271 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM---CVGKA 271 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee---eeech
Confidence 554 57888888863 666777654 444 4445555 999999999988754333211 122223333 67998
Q ss_pred hcccc-ccceeeecCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc---C
Q 014594 285 AGLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD---V 352 (422)
Q Consensus 285 ~~~~G-~r~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~---~ 352 (422)
++ .| ..+|++++++++.+.+... ..+|+.++++.+++.++|+.-+-....++++++-+++.+.|++ .
T Consensus 272 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~ 350 (422)
T PRK05630 272 LT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHL 350 (422)
T ss_pred hh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 86 56 4799999999998877531 3457788888888888775311001333445555555555543 3
Q ss_pred CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 353 ~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+.+.-....|.++-+++....+...+.+.++++|+.+.+.. +.+||... +++++|++.++++
T Consensus 351 ~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~l~~~PpL~it~~~i~~~~~~l~ 415 (422)
T PRK05630 351 PGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG-----RLVYVMPPYITTSEQIAQICAALA 415 (422)
T ss_pred CCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHHHHHHHHHH
Confidence 33332345688888888644456788889999999997742 68999975 4444555444443
No 308
>PRK05965 hypothetical protein; Provisional
Probab=99.70 E-value=1.3e-14 Score=144.75 Aligned_cols=320 Identities=15% Similarity=0.125 Sum_probs=198.5
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..+++.+||+..+.. .+ ..+|++.+++.+ +... . .++.+...+|.++|++....+.+.+++++++++|++
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 456788999977632 23 357888888876 2211 1 233334557888888876544568999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CCCC--------H
Q 014594 161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FSLN--------V 207 (422)
Q Consensus 161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~~d--------~ 207 (422)
.+++... . ++ .+|+....+|++....+.. .|. .+..++.... +.-| +
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV 201 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence 9998532 1 22 5799899999765432211 111 1122321110 1123 2
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCCH-HH---HHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND-ED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~-e~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+.+++.+.+ +++.+|++...+...|.+.+. +- ++++|+. |+++|.||++..|...+.. ....+..++++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv- 280 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM- 280 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE-
Confidence 567777752 467888888777777876644 33 3445555 9999999999988644432 12222234444
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
+++|.++ .| +.+|.+++++++.+.+.. ...+|+.++++.+++.+.|+--+-.+..++.++.-+++.+
T Consensus 281 --~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~ 357 (459)
T PRK05965 281 --TVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAA 357 (459)
T ss_pred --Eechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3589997 78 599999999999887742 2235778899988888887531100144455566666666
Q ss_pred HHcc---CCCCcccCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594 348 LLKD---VPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 410 (422)
Q Consensus 348 ~L~~---~~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 410 (422)
.|++ .+.+.-....|.++.+++.... -...+.+.+.++||++++.. .+.+|+... ++++
T Consensus 358 ~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----~~~i~~~PpL~it~~e 433 (459)
T PRK05965 358 GLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGE 433 (459)
T ss_pred HHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC----CcEEEEECCCcCCHHH
Confidence 6654 3433334566777777763211 13467778889999998643 467999854 3444
Q ss_pred HHHHHHHH
Q 014594 411 TDALMECL 418 (422)
Q Consensus 411 ~~~l~~al 418 (422)
++++.+++
T Consensus 434 i~~~~~~l 441 (459)
T PRK05965 434 FDLIFERT 441 (459)
T ss_pred HHHHHHHH
Confidence 44444444
No 309
>PRK07046 aminotransferase; Validated
Probab=99.70 E-value=4.7e-14 Score=140.32 Aligned_cols=312 Identities=15% Similarity=0.128 Sum_probs=193.6
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
..+++.+||+..+..+ + ..+|.+.+++.+ +..+ ..++.+...+|.+.|++..+ .+.+.+++++++|.+.+++
T Consensus 71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr 148 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR 148 (453)
T ss_pred eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence 4467889998776433 3 356888888876 3322 23344556678888888775 5799999999999999998
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHHH--cCCE-----------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAAV--NGAA-----------------VVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~--~g~~-----------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
.-. ...++|+....+|++....+.. .+.+ +..++ | -|++.+++.+...+..+|+
T Consensus 149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi 223 (453)
T PRK07046 149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL 223 (453)
T ss_pred HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence 432 2237799888888865322211 1110 11111 1 2789999988656788888
Q ss_pred EeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCC-CchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 224 l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
+.......|.+.+. ++++++|+. |+++|.||++. |..+ +......+..++++ +++|.+| .|+.+|.+++
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PDi~---t~gK~lg-gG~Pi~av~g 298 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFL---VVGKPIA-GGVPCAVYGF 298 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCccce---eehhhhc-CCCcceeeee
Confidence 88666666777763 677777876 99999999997 4311 11112222223333 4789998 7899999999
Q ss_pred CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 298 ~~~~~~~l~~~-----------~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
++++.+.+... ...|+.++++.+++.+.|+ +++..+ ..+.-...++.|.+.+++.+........|
T Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G 378 (453)
T PRK07046 299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG 378 (453)
T ss_pred hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 99999887531 1246778888888888875 333333 33334444444444444455332222333
Q ss_pred eEEEEEeC-C-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594 363 NFILCEVT-S-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 419 (422)
Q Consensus 363 ~f~~~~~~-~-~~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 419 (422)
..+.+.+. + .. + ...+...|.++||.+.+.. +.++++.. +.++++++.++++
T Consensus 379 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~ 445 (453)
T PRK07046 379 ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-----NMMLVCPATTAADVDRLVAAFD 445 (453)
T ss_pred cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-----CcEEEeCCCCHHHHHHHHHHHH
Confidence 33444431 1 10 1 2345667779999998632 56788865 3444555555544
No 310
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.69 E-value=4.6e-15 Score=142.50 Aligned_cols=302 Identities=18% Similarity=0.152 Sum_probs=182.2
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHcCCCCC----CEEEeCCHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESD----HILVGCGADE 157 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~-~~~----lr~~la~~~~~~~~----~i~~~~G~~~ 157 (422)
+.|.|-..||.. +|.+++++... .+..+||. .. ..+ .++.++++|+.+++ +|-. .+++.
T Consensus 21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp-~SGs~ 97 (399)
T PF00464_consen 21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQP-HSGSQ 97 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE----SSHHH
T ss_pred cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeec-CCchH
Confidence 358888888876 57888888752 23233332 21 122 34555567898754 3333 45666
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH---HH--H-----HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 158 LIDLIMRCVLDPGDKIVDCPPTFTMYE---FD--A-----AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~--~-----~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
|...++.+|++|||+|+..++...++. .. . .....+.+.++.+ ++..+|.+++++.+.+.+||+|++-.
T Consensus 98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~ 177 (399)
T PF00464_consen 98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGA 177 (399)
T ss_dssp HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECc
Confidence 888899999999999998887664332 11 1 1123467777755 66799999999999888999999764
Q ss_pred CCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC------
Q 014594 227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------ 298 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~------ 298 (422)
-+ .-..++.+++++|++. |.+|+.|-+|.. +...+.....+ .+ -.++.+|..|++ +|-|.|.++.+
T Consensus 178 S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~ 251 (399)
T PF00464_consen 178 SS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-ADVVTGSTHKTL--RGPRGGIILTNKGSKNV 251 (399)
T ss_dssp SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SSEEEEESSGGG---SSS-EEEEES-SEEEE
T ss_pred hh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ceEEEeeccccc--cccCceEEEEcCCcccc
Confidence 33 3366899999999997 999999999964 22112111111 22 348888999986 78899999999
Q ss_pred --------HHHHHHHHHhcCCCCC---cHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCce
Q 014594 299 --------LSIIEYLWRAKQPYNV---SVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSN 363 (422)
Q Consensus 299 --------~~~~~~l~~~~~~~~~---~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~ 363 (422)
+++.+++.+...|... ..-..++...+|. ..++.+..+++.++.+.|.+.|.+.|+..+. ..+..
T Consensus 252 ~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H 331 (399)
T PF00464_consen 252 DKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNH 331 (399)
T ss_dssp -TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSS
T ss_pred CCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCC
Confidence 8899999887766432 1112222222232 2345457778889999999999998854443 24456
Q ss_pred EEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec
Q 014594 364 FILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG 406 (422)
Q Consensus 364 f~~~~~~~-~~~~~~~~~~L~~~gI~v~~----~~~-~~~~~~iRis~~ 406 (422)
.+|+++.. +.+..++.+.|.+.||.+.. ++. +.....|||+..
T Consensus 332 ~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~ 380 (399)
T PF00464_consen 332 QVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTP 380 (399)
T ss_dssp EEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESH
T ss_pred eEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCH
Confidence 78899853 57888888999999999963 332 233578999964
No 311
>PRK04311 selenocysteine synthase; Provisional
Probab=99.69 E-value=5.6e-14 Score=139.25 Aligned_cols=300 Identities=19% Similarity=0.152 Sum_probs=197.0
Q ss_pred CCHHHHHHHhcCCCCC---CC--C--Ccc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 109 ~~~~v~~al~~~~~~~---~y--~--~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
.++++.+++.+....+ .| . ..+ +..+++.+++++|.+ +.+++++++.++..++.. +.+||+|+++...
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence 4688888887632111 11 1 112 468999999999964 577888888999988875 5889999998764
Q ss_pred chh------HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc--cC--cCCCHHHHHHHHcC-CC
Q 014594 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI 248 (422)
Q Consensus 180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP--tG--~~~~~e~l~~i~~~-~~ 248 (422)
+.. .....+..|++++.++.++ ..++++++++++ +++++|+++|++|| +| ...+.+++.++++. |+
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi 251 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL 251 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence 431 2334567899999998532 357999999997 78999999999998 34 67899999999987 99
Q ss_pred eEEEccCCcccc----C---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHH
Q 014594 249 LVVLDEAYTEFS----G---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAE 319 (422)
Q Consensus 249 ~li~Deay~~~~----~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~ 319 (422)
++|+|.+...+. + ...........+.++++.|.+|.+|.+ ..|++++++++++++.+. ...+.+.....
T Consensus 252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l 329 (464)
T PRK04311 252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTL 329 (464)
T ss_pred eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHH
Confidence 999999643221 1 011111222356679999999987634 489999999999877631 12233333333
Q ss_pred HHHHHHcc-----CChH--------HH-HHHHHHHHHHHHHHHHccCC--CC--cccCC-----Cc-------eEEEEEe
Q 014594 320 VAACAALQ-----NPIY--------LE-VKEALIKERERLFKLLKDVP--FL--NPYPS-----YS-------NFILCEV 369 (422)
Q Consensus 320 ~aa~~~L~-----~~~~--------~~-~~~~~~~~~~~l~~~L~~~~--~~--~~~p~-----~~-------~f~~~~~ 369 (422)
.+..++|. +..| +. ..+++.++.+.+.+.|+... .. .+.+. +| .-..+.+
T Consensus 330 ~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~ 409 (464)
T PRK04311 330 AALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTL 409 (464)
T ss_pred HHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEE
Confidence 33333433 1112 22 44677788889999997753 11 22221 11 1122333
Q ss_pred C-CCCCHHHHHHHHHhC--CcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhhh
Q 014594 370 T-SGMDAKKLKDDLAKM--GVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMHL 421 (422)
Q Consensus 370 ~-~~~~~~~~~~~L~~~--gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~l 421 (422)
. ++.+..++.+.|++. .|+.+-. ++.+.+-+.+ +.+.+.+.++++.+
T Consensus 410 ~~~~~~~~~l~~~lr~~~~~i~~r~~-----~~~~~ld~r~~~~~~~~~~~~~~~~~ 461 (464)
T PRK04311 410 TPKDRSLEALAARLRLLPPPVIGRIE-----DGRLLLDLRTLEEEDEERLAAALLEA 461 (464)
T ss_pred eCCCCCHHHHHHHHhcCCCCEEEEEE-----CCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 2 356889999999864 4555533 4777777754 45667777777654
No 312
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=3.8e-14 Score=141.34 Aligned_cols=321 Identities=14% Similarity=0.151 Sum_probs=197.3
Q ss_pred CCCCCCeEEcCCC-CCCCC-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~---~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+++.+||+..+ ...++ .+|+|.+++.+ +. +. ..|+.+...+|.++|++.++-..+.+++++++++|++.++
T Consensus 68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al 147 (459)
T PRK06082 68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL 147 (459)
T ss_pred ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence 3467889998633 23344 67889888875 22 11 2345555678888888888643468999999999999999
Q ss_pred HHhc--CCCCEEEEcCCCchhHHHHHH-HcCCE------------EEEecCCCC----CC-CC------HHHHHHHhhc-
Q 014594 164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGAA------------VVKVPRKSD----FS-LN------VELIADAVER- 216 (422)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~~------------~~~v~~~~~----~~-~d------~~~l~~~i~~- 216 (422)
+... ....+|+....+|+.....+. ..|.. +..+|.... +. .| ++.+++.+.+
T Consensus 148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 8432 223678888888876543332 22211 222331111 11 11 3557777742
Q ss_pred CCCeEEEEeCCCCccCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-
Q 014594 217 EKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG- 289 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G- 289 (422)
.++.+|++....+..+.+.+ .++++++|+. |+++|.||++..|...+.. ....+..++++ +++|.++ .|
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv---~~gKgl~-gG~ 303 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDIL---CIGKGLG-GGL 303 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEE---Eeccccc-CCC
Confidence 35778888766665444566 3566666765 9999999999987543322 12222233333 3799998 66
Q ss_pred ccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCce
Q 014594 290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSN 363 (422)
Q Consensus 290 ~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~ 363 (422)
+.+|.+++++++.+.... ....|+.++++.+++.+.|+.-+-.+..++.+++-++|.+.|++ ++.+.-....|.
T Consensus 304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 383 (459)
T PRK06082 304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGL 383 (459)
T ss_pred CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccc
Confidence 589999999887654321 12357788888888888875311001444555555555555544 454333456777
Q ss_pred EEEEEeCCCC-----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 364 FILCEVTSGM-----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 364 f~~~~~~~~~-----~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
++.+++.... + ...+...+.++||++.+.. .+.+|++.. +.++++++.++++
T Consensus 384 ~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~l~ 446 (459)
T PRK06082 384 LWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ----GNVIQLSPPLIITREELTQALAILE 446 (459)
T ss_pred eeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC----CCEEEEeCCCccCHHHHHHHHHHHH
Confidence 8777774211 1 3466777889999998743 478999965 4455555555444
No 313
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=2e-14 Score=142.16 Aligned_cols=320 Identities=13% Similarity=0.148 Sum_probs=200.1
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +. +.. .|..+...+|.++|++......+.+++++++++|++.
T Consensus 40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~ 119 (429)
T PRK06173 40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV 119 (429)
T ss_pred cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence 34678899997763 233 356888888765 22 111 2344455678888888775445699999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CC-----CCHHHHHHH
Q 014594 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FS-----LNVELIADA 213 (422)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~-----~d~~~l~~~ 213 (422)
+++.... +| .+|+....+|++....+.. .|. .+..+|.... +. -+++.+++.
T Consensus 120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~ 199 (429)
T PRK06173 120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL 199 (429)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence 9985321 33 5688888888764322211 110 1122221110 10 136667777
Q ss_pred hhc--CCCeEEEEeCC-CCccCcC-CCHHHHHHH---HcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChh
Q 014594 214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 214 i~~--~~~~~i~l~~p-~NPtG~~-~~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK 283 (422)
+.+ +++.+|++... +.-.|.. .+.+-+.++ |+. |+++|+||++..|...+.. ....+..++ ++ +|+|
T Consensus 200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-iv--~~gK 276 (429)
T PRK06173 200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD-IM--CIGK 276 (429)
T ss_pred HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC-EE--Eeeh
Confidence 742 46788888864 6767776 455555554 444 9999999999877543332 122222233 33 3899
Q ss_pred hhcccc-ccceeeecCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---
Q 014594 284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV--- 352 (422)
Q Consensus 284 ~~~~~G-~r~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~--- 352 (422)
.++ .| +.++.+++++++.+.+.. ...+|..++++.+++.++|+.-+-.+..++.+++.+++.+.|+++
T Consensus 277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~ 355 (429)
T PRK06173 277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEF 355 (429)
T ss_pred hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 987 77 478889999999887742 223466788888888888753110014556666666777766643
Q ss_pred CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 419 (422)
Q Consensus 353 ~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 419 (422)
+.+.-....|.++.+.+....+...+.+.|.++||.+.+.. +.+||.... .++.+++.++++
T Consensus 356 ~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g-----~~l~~~Ppl~it~~ei~~~~~~l~ 420 (429)
T PRK06173 356 DSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG-----KLVYIMPPFIISPDELSQLTSGLL 420 (429)
T ss_pred CCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC-----CEEEEeCCccCCHHHHHHHHHHHH
Confidence 22211235677777888654456788999999999998753 589999763 444444444443
No 314
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.2e-14 Score=135.06 Aligned_cols=315 Identities=18% Similarity=0.198 Sum_probs=209.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------Ccch-H----HHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DPES-R----RLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~------~~~~-~----~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.|.|=..||-. ++.|++++.. + .+..+|| ...+ . -..+...++||.+..+|-..+|++ |...
T Consensus 27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~-AN~a 103 (413)
T COG0112 27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQ-ANQA 103 (413)
T ss_pred hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchH-HHHH
Confidence 458888888865 5889998865 2 2333343 2222 1 234445567898888999888877 5556
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHH---HHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++.++++|||+|+-.+..+.++.... ...|. +++.++.+ ++..+|.|++++.+.+.+||+|+.- .+---..+
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G--~SaY~r~i 181 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAG--GSAYSRPI 181 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEEC--cccccccc
Confidence 66779999999997776665432211 11233 45555655 5578999999999988999999853 22244778
Q ss_pred CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC
Q 014594 236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY 312 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~ 312 (422)
+.+++++|++. |.++++|.+|.. +...+.....+ . ...++..|.+|.+ .|-|.|.|+++. ++.+++.+.-.|.
T Consensus 182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~-~-~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg 257 (413)
T COG0112 182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL-P-HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG 257 (413)
T ss_pred CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC-C-ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence 99999999998 999999999964 22222111111 1 1348889999985 788999999985 8888888876664
Q ss_pred CC-cHHHHHHH--HHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCC-CceEEEEEeC-CCCCHHHHHHHHHh
Q 014594 313 NV-SVAAEVAA--CAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPS-YSNFILCEVT-SGMDAKKLKDDLAK 384 (422)
Q Consensus 313 ~~-~~~~~~aa--~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f~~~~~~-~~~~~~~~~~~L~~ 384 (422)
.. ++.....+ ..++. .+++.+-.+++.++.+.|.+.|.+.|+..+... +...+.+++. .+.+..+....|.+
T Consensus 258 ~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~ 337 (413)
T COG0112 258 LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALER 337 (413)
T ss_pred cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHH
Confidence 33 22221111 12222 235545677788999999999999875444322 2234567775 35677888888889
Q ss_pred CCcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014594 385 MGVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLM 419 (422)
Q Consensus 385 ~gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~ 419 (422)
.||.+. |++. +..+..|||... .+.+++++.+.+.
T Consensus 338 ~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~ 385 (413)
T COG0112 338 AGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIA 385 (413)
T ss_pred cCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHH
Confidence 999996 4443 345678999853 2445666655544
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.69 E-value=4.6e-14 Score=140.86 Aligned_cols=320 Identities=15% Similarity=0.122 Sum_probs=194.1
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~--~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +.. . .. ++.+...+|.++|+++++...+.+++++++++|++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE 129 (460)
T ss_pred eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 45677899987663 223 356888888876 321 1 11 12233567888888888644478999999999999
Q ss_pred HHHHHhc-------CCCC-EEEEcCCCchhHHHHH-HHcCCE-----------EEEecCCCC----CCC--------CHH
Q 014594 161 LIMRCVL-------DPGD-KIVDCPPTFTMYEFDA-AVNGAA-----------VVKVPRKSD----FSL--------NVE 208 (422)
Q Consensus 161 ~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~-~~~g~~-----------~~~v~~~~~----~~~--------d~~ 208 (422)
.+++... ++++ .|+....+|++....+ ...|.. +..+|.... +.. +.+
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9999653 2333 3556666776543322 222211 223331110 011 134
Q ss_pred HHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (422)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~ 278 (422)
.+++.+.+ +++.+|++.......|.+.+ .+++++||+. |+++|+||++..|...+... ...+-.++++
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv-- 287 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL-- 287 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE--
Confidence 56665532 45678888877777888887 7788888887 99999999998876443321 2222233333
Q ss_pred ccChhhhccccc-cceeeecCHHHHHHHHH------hcCCCCCcHHHHHHHHHHccC---ChHHH-HH-HHHHHHHHHHH
Q 014594 279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQN---PIYLE-VK-EALIKERERLF 346 (422)
Q Consensus 279 ~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~-~~~~~~~~~l~ 346 (422)
+++|.++ .|. .+|.+++++++.+.+.. ...+|+.++++.+++.+.|+. ++..+ .+ +.-...++.|.
T Consensus 288 -~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~ 365 (460)
T PRK12403 288 -SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR 365 (460)
T ss_pred -EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3789987 674 89999999998887743 123467889988888888753 33333 32 23333444444
Q ss_pred HHHccCCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHH
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTD 412 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~ 412 (422)
+..++++.+.-....|.++.+++... .+ ...+...+.++|+.+.+.. +.+|++.. +.++.+
T Consensus 366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~~~l~Ppl~it~~eid 440 (460)
T PRK12403 366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----GRMIMAPALVAGRAEID 440 (460)
T ss_pred HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----CEEEEECCCCCCHHHHH
Confidence 44444554444556777877777421 01 1234455678999998542 45889876 344444
Q ss_pred HHHHHHh
Q 014594 413 ALMECLM 419 (422)
Q Consensus 413 ~l~~al~ 419 (422)
++.++++
T Consensus 441 ~~~~~l~ 447 (460)
T PRK12403 441 ELVDKTR 447 (460)
T ss_pred HHHHHHH
Confidence 4444443
No 316
>PLN02452 phosphoserine transaminase
Probab=99.69 E-value=1.4e-14 Score=139.63 Aligned_cols=306 Identities=13% Similarity=0.068 Sum_probs=205.8
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-C-----------CCCCCCCCcc--hHHHHHHHHHHcCCCCC--CEEEeCCHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-L-----------KFPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELI 159 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~-----------~~~~~y~~~~--~~~lr~~la~~~~~~~~--~i~~~~G~~~al 159 (422)
..+.|.. .|...|++|++++.+ + ..+|+-++.. ..+.++.|.++++++.+ -+++..|++.++
T Consensus 7 ~~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ 84 (365)
T PLN02452 7 RVFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQF 84 (365)
T ss_pred ceEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHH
Confidence 3455544 556668999988865 2 1224444432 56888999999998433 356678999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCc-h-hHHHHHHHcCCEEEEecCCCC---CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 160 DLIMRCVLDPGDKIVDCPPTF-T-MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y-~-~~~~~~~~~g~~~~~v~~~~~---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
++++..++.+||++++...++ . .+...++.+|...+....+++ ..+++++++. .++.+.+.+++.+..||+.
T Consensus 85 ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~ 161 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVE 161 (365)
T ss_pred HHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEe
Confidence 999999999999877665544 3 455667778864444422122 1356666522 2568999999999999996
Q ss_pred -CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594 235 -INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (422)
Q Consensus 235 -~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---- 309 (422)
.+.+++ . ++++|+|.+....... -.+...+ +...|..|.+|.+| +|++++++++++++....
T Consensus 162 ~~~~~~i---~--~~~lvVDa~Ss~g~~p----idv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~ 228 (365)
T PLN02452 162 FKDYPDV---G--NVPLVADMSSNFLSKP----VDVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGML 228 (365)
T ss_pred cCccccc---C--CCeEEEECCccccCcc----cCHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchh
Confidence 443333 2 4899999998744321 1122233 23358999999888 789999999887653211
Q ss_pred ---------C-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCC-cc-cC---CCceEEEEEeC
Q 014594 310 ---------Q-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFL-NP-YP---SYSNFILCEVT 370 (422)
Q Consensus 310 ---------~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~-~p---~~~~f~~~~~~ 370 (422)
+ .++++....+++..+|+. ...++ +.++.+++.+++++.|++.+++ .. .. .....+.+.++
T Consensus 229 ~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~ 308 (365)
T PLN02452 229 DYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG 308 (365)
T ss_pred hHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC
Confidence 1 135666666666666653 32456 9999999999999999986433 21 11 12345667777
Q ss_pred CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+....++|.+.+.++|+...+|.... .+ +|+|+- ..++++.|.++++.+
T Consensus 309 ~~~~~~~f~~~~~~~g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~~f 360 (365)
T PLN02452 309 GSELEAEFVKEAAKAGMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMKDF 360 (365)
T ss_pred CchhHHHHHHHHHHCCCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHHHH
Confidence 54467889999999999998876432 23 999963 466788888888765
No 317
>PRK07480 putative aminotransferase; Validated
Probab=99.69 E-value=1.7e-14 Score=143.74 Aligned_cols=319 Identities=18% Similarity=0.162 Sum_probs=193.8
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC------CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP------YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~------~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ +... ..++.+...+|.++|++.++...+.+++++++++|++
T Consensus 46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND 125 (456)
T ss_pred eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 45678899998763 223 357888888875 2211 1234445567888888887544569999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCC----CCC--------H
Q 014594 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDF----SLN--------V 207 (422)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~----~~d--------~ 207 (422)
.+++.... +| .+|+....+|++....+.. .|.. +..++.+..+ ..+ +
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA 205 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence 99985321 33 4688888888754332211 1111 1112211100 011 2
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+.+++.+.+ .++.+|++...+.-.|.+.+ .+.+++||+. |+++|+||++..|...+.. ....+..+++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi-- 283 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL-- 283 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe--
Confidence 566655521 46778888877776788776 4566667766 9999999999988543322 1222222333
Q ss_pred EccChhhhccccc-cceeeecCHHHHHHHHH------hcCCCCCcHHHHHHHHHHccCChHHHHHHHH-HHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQNPIYLEVKEAL-IKERERLFKLL 349 (422)
Q Consensus 278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~-~~~~~~l~~~L 349 (422)
-+|+|.++ .|+ .+|.+++++++.+.+.. ...+|+.|+++.+++.+.|+.-+-.+..++. ++.-+++.+.|
T Consensus 284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l 361 (456)
T PRK07480 284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL 361 (456)
T ss_pred -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 35689987 674 89999999999887731 2235788999999998888531100133344 24444444444
Q ss_pred c---cCCCCcccCCCceEEEEEeCCC------C-C----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHH
Q 014594 350 K---DVPFLNPYPSYSNFILCEVTSG------M-D----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTD 412 (422)
Q Consensus 350 ~---~~~~~~~~p~~~~f~~~~~~~~------~-~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~ 412 (422)
+ +++.+.-....|.++.+++.+. . + ...+.+.++++||.+.+.. +.+||+... .+++|
T Consensus 362 ~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~l~~~Ppl~it~~eid 436 (456)
T PRK07480 362 RELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG-----DRMIISPPLVITHAEID 436 (456)
T ss_pred HHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC-----CEEEEECCCCCCHHHHH
Confidence 3 4443333446677777777311 0 1 2456677889999997642 679999764 44444
Q ss_pred HHHHHH
Q 014594 413 ALMECL 418 (422)
Q Consensus 413 ~l~~al 418 (422)
++.+++
T Consensus 437 ~~~~~l 442 (456)
T PRK07480 437 ELVEKA 442 (456)
T ss_pred HHHHHH
Confidence 444443
No 318
>PRK07483 hypothetical protein; Provisional
Probab=99.69 E-value=5.7e-14 Score=139.56 Aligned_cols=321 Identities=13% Similarity=0.160 Sum_probs=194.2
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.+||+..+. ..+ ..+|.+.+++.+ +... ..|..+...+|.+.|++......+.+++++++++|++.
T Consensus 26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 105 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA 105 (443)
T ss_pred eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence 45678899998773 333 357888888876 3211 11333445567777777764334699999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC-----C--------H
Q 014594 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V 207 (422)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-----d--------~ 207 (422)
+++.... +| .+|+....+|++....+.. .|- .+..++....+.. + +
T Consensus 106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK07483 106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA 185 (443)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence 9984321 33 5688888888755433222 111 1122221111110 0 2
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCC-ccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNN-PDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~N-PtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i 276 (422)
+.+++.+.+ +++.+|++...+. -.|.+.+ . +.++++|+. |+++|.||++..|...+.... ..+..++++
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 265 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV 265 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence 566665532 4577888886553 3465554 4 444555665 999999999998864443221 222233334
Q ss_pred EEccChhhhccccc-cceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLF 346 (422)
Q Consensus 277 ~~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~ 346 (422)
+++|.++ .|+ .+|.+++++++.+.+... ..+|+.|+++.+++.+.|+- ++ ..++.++.-++|.
T Consensus 266 ---~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~ 338 (443)
T PRK07483 266 ---TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG---LLANVRARGEQLR 338 (443)
T ss_pred ---eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 4589987 785 899999999998877532 23577889988888888752 33 3344444444444
Q ss_pred HHH----ccCCCCcccCCCceEEEEEeCCC------C-----CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec--
Q 014594 347 KLL----KDVPFLNPYPSYSNFILCEVTSG------M-----DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG-- 406 (422)
Q Consensus 347 ~~L----~~~~~~~~~p~~~~f~~~~~~~~------~-----~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~-- 406 (422)
+.| ++++.+.-....|.++-+++... . ....+.+.+.++||++.+... ...++.+||...
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~ 418 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFI 418 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCC
Confidence 444 44554333456777777766321 0 135677888899999987532 122478999875
Q ss_pred -ChhhHHHHHHHH
Q 014594 407 -KPEHTDALMECL 418 (422)
Q Consensus 407 -~~~~~~~l~~al 418 (422)
+.+++|++.+++
T Consensus 419 it~~eid~~~~~l 431 (443)
T PRK07483 419 ITAAQIDEIVERL 431 (443)
T ss_pred CCHHHHHHHHHHH
Confidence 344444444443
No 319
>PRK06148 hypothetical protein; Provisional
Probab=99.68 E-value=2.8e-14 Score=154.49 Aligned_cols=323 Identities=13% Similarity=0.082 Sum_probs=201.7
Q ss_pred CCCCCCeEEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
..+++.++|+.++...++ .+|+|.+++.+ +. ....|..+...+|-++|++.+.-..+.++++++|++|++.+++.
T Consensus 620 D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~Alkl 699 (1013)
T PRK06148 620 DNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRL 699 (1013)
T ss_pred ECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 345788999988765554 57889888876 32 22345555567788888887754346899999999999999994
Q ss_pred hc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCC----CCCC-C-------HHHHHHHhh---
Q 014594 166 VL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS----DFSL-N-------VELIADAVE--- 215 (422)
Q Consensus 166 l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~----~~~~-d-------~~~l~~~i~--- 215 (422)
-. ....+|+....+|++....+.. .+ ..+..++..+ .++. | .+.+++.+.
T Consensus 700 Ar~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 700 ARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred HHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 32 2236788888888755432211 11 0111111110 1111 1 134554442
Q ss_pred --cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hh--hhhhcCCcEEEEccChhhh
Q 014594 216 --REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RM--EWVKKHDNLIVLRTFSKRA 285 (422)
Q Consensus 216 --~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~--~~~~~~~~~i~~~S~SK~~ 285 (422)
..++.+|++.....-.|.+.+ .+++.++|+. |+++|.||++..|...+. .. ...+-.+.+ -+++|.+
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi---vt~gK~l 856 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI---VTMGKPI 856 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce---eeecccc
Confidence 145788888866666777776 4555666666 999999999998864442 11 112222333 3568999
Q ss_pred ccccccceeeecCHHHHHHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCccc
Q 014594 286 GLAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPY 358 (422)
Q Consensus 286 ~~~G~r~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 358 (422)
| .|+.+|.+++++++.+.+.. ...+|+.|+++.+++.+.|+.-+-.+..++.++.-++|.+.|++ ++.+.-.
T Consensus 857 g-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V 935 (1013)
T PRK06148 857 G-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDV 935 (1013)
T ss_pred c-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 8 78999999999999887743 22457789999888888875311001444455555555555544 4544334
Q ss_pred CCCceEEEEEeCCCC--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 359 PSYSNFILCEVTSGM--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 359 p~~~~f~~~~~~~~~--------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
...|.++-+++.... ....+.+.|+++||++.+... ..+.+||... +.++.|++.++++
T Consensus 936 rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~ 1005 (1013)
T PRK06148 936 RGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLD 1005 (1013)
T ss_pred eeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 567788888774211 134677888899999986432 2578999876 3444444444443
No 320
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1.1e-13 Score=137.74 Aligned_cols=324 Identities=16% Similarity=0.172 Sum_probs=196.0
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +... ..| +.+...+|.+.|++..+...+.+++++++++|++.
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~ 128 (457)
T PRK05639 49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM 128 (457)
T ss_pred eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 45678899998774 233 457888888876 3211 122 23344678888888776444689999999999999
Q ss_pred HHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCCC--------CCH--------HH
Q 014594 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL 209 (422)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--------~d~--------~~ 209 (422)
+++.-. ....+|+....+|++....+.. .|. .++.+|.++.+. -|. +.
T Consensus 129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (457)
T PRK05639 129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY 208 (457)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence 999532 2336788888888765433322 111 133344221111 122 23
Q ss_pred HHHHhh-----cCCCeEEEEeCCCCccCcCCC-HHHHH---HHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 210 IADAVE-----REKPKCIFLTSPNNPDGSIIN-DEDLL---KILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 210 l~~~i~-----~~~~~~i~l~~p~NPtG~~~~-~e~l~---~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+++.+. ..++.+|++...+...|.+.+ .+-++ ++|+. |+++|+||++..|...+.. ....+-.+++++
T Consensus 209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~ 288 (457)
T PRK05639 209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII 288 (457)
T ss_pred HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE
Confidence 444431 256889998877776787664 44444 44554 9999999999987543332 122222333333
Q ss_pred EccChhhhccccccceeeecCHHHHHHHHH-hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----V 352 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~ 352 (422)
|+|.++ .|+.+|.+++++++.+.... ....++.++++.+++.+.|+.-+-.+..++.+++-++|.+.|++ .
T Consensus 289 ---~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 364 (457)
T PRK05639 289 ---FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF 364 (457)
T ss_pred ---echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 799997 68999999999999883211 12246678888888887775321111344444455555555544 4
Q ss_pred CCCcccCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 353 PFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 353 ~~~~~~p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+.+.-....|.++.+++... .....+.+.+.++|+++.+.. ..++.+|+.....-+.++++++++.
T Consensus 365 ~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g--~~~~~lr~~Ppl~it~~~id~~~~~ 436 (457)
T PRK05639 365 EVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG--MFGNVIRITPPLVITKEIAEKGLEI 436 (457)
T ss_pred CCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC--CCCCEEEEeCCCccCHHHHHHHHHH
Confidence 43333456777777776321 114567788889999997653 1247899997633223444444443
No 321
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=5.3e-14 Score=140.07 Aligned_cols=320 Identities=13% Similarity=0.101 Sum_probs=197.7
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +. +. ..++.+...+|.+.|++..+..-+.+++++++++|++.
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~ 129 (453)
T PRK06943 50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI 129 (453)
T ss_pred eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence 34678899998773 333 357888888875 22 11 12344445678888888776434689999999999999
Q ss_pred HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC------------CCHH
Q 014594 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVE 208 (422)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~------------~d~~ 208 (422)
+++.-. .+| .+|+....+|++....+.. .|- .+..++.+.... -+++
T Consensus 130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (453)
T PRK06943 130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA 209 (453)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence 999541 123 6799999999765432221 110 122233211111 1246
Q ss_pred HHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHH---HHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (422)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~ 278 (422)
.+++.+.+ +++.+|++.. .+.-.|... +.+-++ ++|+. |+++|.||++..|...+... ...+..+++++
T Consensus 210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt- 288 (453)
T PRK06943 210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC- 288 (453)
T ss_pred HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe-
Confidence 77777742 4678888886 366677765 444444 44554 99999999999886443321 22233344443
Q ss_pred ccChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHH
Q 014594 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLL 349 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L 349 (422)
++|.++ .| +.+|.+++++++.+.+.. ...+|+.|+++.+++.+.|+--+-.+..++.+++-+++.+.|
T Consensus 289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L 365 (453)
T PRK06943 289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAAL 365 (453)
T ss_pred --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 589998 78 599999999999887752 223567889988888888753110013444455555555555
Q ss_pred cc---CCCCcccCCCceEEEEEeCCCCC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 350 KD---VPFLNPYPSYSNFILCEVTSGMD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 350 ~~---~~~~~~~p~~~~f~~~~~~~~~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
++ .+.+.-....|.++-+++....+ ...+.+.+.++||++.+.. +.+||+.. ++++++++.+++
T Consensus 366 ~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~l~~~Ppl~it~~eid~~~~~l 440 (453)
T PRK06943 366 APLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG-----TTVYLMPPYVLDDDEIAWLAERT 440 (453)
T ss_pred HHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCcCCHHHHHHHHHHH
Confidence 44 33333345667777777742111 3567788889999998753 46999854 344444444444
Q ss_pred h
Q 014594 419 M 419 (422)
Q Consensus 419 ~ 419 (422)
+
T Consensus 441 ~ 441 (453)
T PRK06943 441 R 441 (453)
T ss_pred H
Confidence 3
No 322
>PRK07036 hypothetical protein; Provisional
Probab=99.67 E-value=6.5e-14 Score=139.94 Aligned_cols=319 Identities=15% Similarity=0.173 Sum_probs=198.1
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +. +... ++.+...+|.+.|.+......+.+++++++++|++
T Consensus 47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 126 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD 126 (466)
T ss_pred ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 34678899998774 223 357888888875 22 1111 23333556777777776544468999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHHc-CC------------EEEEecCCCC----CCCC--------H
Q 014594 161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSD----FSLN--------V 207 (422)
Q Consensus 161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~----~~~d--------~ 207 (422)
.+++... . +| .+|+....+|++....+... |- .+..++.+.. ++.+ +
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 9999431 1 22 67888888887654333221 11 1233332111 1111 2
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh---hhhcCCcEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLI 276 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i 276 (422)
+.+++.+.. +++.+|++.......|...+ .++++++|+. |+++|.||++..|...+.... ..+..++++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv 286 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII 286 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence 345555532 46788888877777888887 5677777876 999999999998864332211 122233333
Q ss_pred EEccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF 346 (422)
Q Consensus 277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~ 346 (422)
+++|.++ .| +.+|.+++++++.+.+... ..+|+.++++.+++.+.|+.-+-.+..++.++..++|.
T Consensus 287 ---t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~ 362 (466)
T PRK07036 287 ---TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFE 362 (466)
T ss_pred ---EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4689987 68 5899999999998877531 12567789998888888753110014455555555555
Q ss_pred HHHcc---CCCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594 347 KLLKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 409 (422)
Q Consensus 347 ~~L~~---~~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 409 (422)
+.|++ ++.+......|.++.+++.... + ...+.+.+.++||++.+.. +.+|++.. +.+
T Consensus 363 ~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~l~Ppl~it~~ 437 (466)
T PRK07036 363 ERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-----HLCVLSPPLIITRA 437 (466)
T ss_pred HHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCcCCHH
Confidence 55544 4433334456777777773210 1 3467778889999998643 57888855 445
Q ss_pred hHHHHHHHH
Q 014594 410 HTDALMECL 418 (422)
Q Consensus 410 ~~~~l~~al 418 (422)
+++++.+++
T Consensus 438 ~id~~~~~l 446 (466)
T PRK07036 438 QIDEIVAIL 446 (466)
T ss_pred HHHHHHHHH
Confidence 555554444
No 323
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.67 E-value=7e-14 Score=138.46 Aligned_cols=317 Identities=14% Similarity=0.141 Sum_probs=198.2
Q ss_pred CCCCCeEEcCCCC---CCCCCCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDANE---NPYGPPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~~---~~~~~~~~v~~al~~-~~~-~---~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.++++++|+..+. +--..+|++.+++.+ +.. . . .+..+...++.+.+++..+..-+.++++++++++++.+
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A 121 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA 121 (427)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence 4577899998764 222457888888775 221 1 1 12333456788888887754447999999999999999
Q ss_pred HHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCCE-------------EEEecCC-CCCC-----CCHHHHHHHh
Q 014594 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRK-SDFS-----LNVELIADAV 214 (422)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~-~~~~-----~d~~~l~~~i 214 (422)
++.-.. +| .+|+....+|++....+.. .|.. ...++.. ..+. -|++++++.+
T Consensus 122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l 201 (427)
T TIGR00508 122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM 201 (427)
T ss_pred HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence 885321 23 6799999999765433322 1211 1112111 0111 1467777777
Q ss_pred hc--CCCeEEEEeCC-CCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594 215 ER--EKPKCIFLTSP-NNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~ 284 (422)
.+ .+..+|++... ++-.|... +.+.+.+| |+. |+++|+||++.+|...+.. ....+..+. ++ +++|.
T Consensus 202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD-i~--~~gK~ 278 (427)
T TIGR00508 202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD-IL--CVGKA 278 (427)
T ss_pred HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC-EE--Eechh
Confidence 53 35667777753 55555533 55555555 444 9999999999877543322 112222233 33 37999
Q ss_pred hccccc-cceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCC
Q 014594 285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 285 ~~~~G~-r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~ 353 (422)
++ .|+ .++.+++++++.+.+... ..+|..++++.+++.++|+. ++ ..++.+++.++|.+.|+++.
T Consensus 279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~ 354 (427)
T TIGR00508 279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLR 354 (427)
T ss_pred hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhh
Confidence 96 774 688888999998887642 23466788888888888762 23 44566666777777776653
Q ss_pred CC---cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 354 FL---NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 354 ~~---~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.. ......|.++.+.+....+...+.+.|.++||.+.+.. +.+|++.. +.++++++.+++++
T Consensus 355 ~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 355 KNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG-----KLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred cCCCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 21 11223467777777544467789999999999997653 47999875 45555655555543
No 324
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.66 E-value=7.2e-14 Score=138.08 Aligned_cols=321 Identities=12% Similarity=0.102 Sum_probs=196.1
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+++.+||+..+.. .+ ..+|++.+++.+ +... ..++.+...+|-+.|.+.++...+.+.+++++++|++.+++
T Consensus 49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik 128 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR 128 (433)
T ss_pred ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence 356788999987743 33 357888888876 3222 22344456678888888776444689999999999999999
Q ss_pred HhcC-CC-CEEEEcCCCchhHHHH---HHH-cCCEE----EEe--c-CCCC----CCCCHHHHHHHhhc--CCCeEEEEe
Q 014594 165 CVLD-PG-DKIVDCPPTFTMYEFD---AAV-NGAAV----VKV--P-RKSD----FSLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 165 ~l~~-~g-d~Vl~~~p~y~~~~~~---~~~-~g~~~----~~v--~-~~~~----~~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
.-.. .| .+|+....+|++.... +.. .+... ... + .... ..-|++.+++.+.+ .++.+|++.
T Consensus 129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 4321 23 6788888888765311 111 11000 000 0 0000 01268888888853 356788877
Q ss_pred CCCCccCcCCCHH----HHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 ~p~NPtG~~~~~e----~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
......|...+.+ ++.++|+. |+++|+||++..|. .+.. ....+..+.++ +++|.+| .|+.+|+++++
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~ga~~~~gv~PDi~---~~gK~lg-gG~p~~av~~~ 283 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQGGAAAIYHVKPDIT---VYGKILG-GGLPAAAVVAH 283 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHhHHHHhcCCCCCeE---EEccccc-CCcceeeeeec
Confidence 7777789888765 88888886 99999999998772 2221 11122223332 4799987 67889999999
Q ss_pred HHHHHHHHHhc-----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHH----HHHHccCCC-CcccCCCceEEEEE
Q 014594 299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERL----FKLLKDVPF-LNPYPSYSNFILCE 368 (422)
Q Consensus 299 ~~~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l----~~~L~~~~~-~~~~p~~~~f~~~~ 368 (422)
+++++.+.... ..++.+++..+++.+.|+.-+..+.+++++++-+++ .+.+.+.++ +.... .|.++.++
T Consensus 284 ~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~ 362 (433)
T PRK00615 284 KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFF 362 (433)
T ss_pred HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEE
Confidence 99998875322 235668888888888875311001344444444555 444444332 22233 56666666
Q ss_pred eCCCC----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 369 VTSGM----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 369 ~~~~~----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+.... + ...+...|.++||.+.+...+. .+++... ++++++++.++++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~ls~~h-t~~did~~~~a~~~ 424 (433)
T PRK00615 363 FNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA--SFLSSAH-SMENLDYAQNVLID 424 (433)
T ss_pred EeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc--cceecCC-CHHHHHHHHHHHHH
Confidence 64211 1 2367888889999998765311 1232222 45556677666654
No 325
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=6.4e-14 Score=139.85 Aligned_cols=319 Identities=13% Similarity=0.139 Sum_probs=196.9
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---C--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.++|+..+. ..+ ..+|++.+++.+ +.. . ..|..+...+|.+.|++......+.+++++++++|++.
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 122 (466)
T PRK07030 43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV 122 (466)
T ss_pred ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 34678899998773 223 357888888775 321 1 12344445678888887765344699999999999999
Q ss_pred HHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCC----CC--------CHH
Q 014594 162 IMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (422)
Q Consensus 162 ~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~ 208 (422)
+++... . +| .+|+....+|++....+.. .|. .+..+|....+ +. +++
T Consensus 123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~ 202 (466)
T PRK07030 123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA 202 (466)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence 999541 1 23 5788899999765443322 121 12223321111 11 245
Q ss_pred HHHHHhhc--CCCeEEEEeC-CCCccCcCCC-HH---HHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEE
Q 014594 209 LIADAVER--EKPKCIFLTS-PNNPDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVL 278 (422)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~~-~e---~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~ 278 (422)
.+++.+.+ +++.+|++.. .+.-.|...+ .+ +++++|+. |+++|.||++..|...+.. ....+-.++++
T Consensus 203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv-- 280 (466)
T PRK07030 203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL-- 280 (466)
T ss_pred HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE--
Confidence 66777742 4677888776 4666677554 33 44555655 9999999999988643332 12222334444
Q ss_pred ccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL 348 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~ 348 (422)
+++|.++ .| +.+|.+++++++.+.+.. ...+|+.++++.+++.+.|+--+-.+..++.++.-+++.+.
T Consensus 281 -~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~ 358 (466)
T PRK07030 281 -CLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEA 358 (466)
T ss_pred -eeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3589988 78 499999999999887742 22347788999888888875311111445555666666665
Q ss_pred Hcc---CCCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594 349 LKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT 411 (422)
Q Consensus 349 L~~---~~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~ 411 (422)
|++ .+.+.-....|.++.+++.... + ...+.+.+.++|+++.+.. +.+|+... +.+++
T Consensus 359 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~i~~~Ppl~it~~ei 433 (466)
T PRK07030 359 TAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-----SVVYFLPPYVITPEQI 433 (466)
T ss_pred HHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHH
Confidence 554 3433324566777777774211 1 2467788889999998753 57999855 34444
Q ss_pred HHHHHHH
Q 014594 412 DALMECL 418 (422)
Q Consensus 412 ~~l~~al 418 (422)
+++.+.+
T Consensus 434 d~~~~~l 440 (466)
T PRK07030 434 DFLAEVA 440 (466)
T ss_pred HHHHHHH
Confidence 4443333
No 326
>PRK07481 hypothetical protein; Provisional
Probab=99.66 E-value=1e-13 Score=138.03 Aligned_cols=319 Identities=15% Similarity=0.160 Sum_probs=195.9
Q ss_pred CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID 160 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~ 160 (422)
.+++.+||+..+. ..+ ..+|++.+++.+ +... . .++.+...++.+.|++.++ -..+.+++++++++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence 4577889997762 233 357888888865 3211 1 2344445678888888773 22458999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCC----CC-CCHHHH----
Q 014594 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSD----FS-LNVELI---- 210 (422)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~----~~-~d~~~l---- 210 (422)
.+++.-.. +| .+|+....+|++....+...+. .+..++.+.. ++ .|++.+
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 99995321 23 5789899889765443222111 1222221111 11 244443
Q ss_pred ----HHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEE
Q 014594 211 ----ADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI 276 (422)
Q Consensus 211 ----~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i 276 (422)
++.+. .+++.+|++...+.-.|.+.+ .++++++|+. |+++|.||++..|...+... ...+..++++
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 278 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM 278 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE
Confidence 33332 246788988877776788665 4555666665 99999999999886433221 1222233333
Q ss_pred EEccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF 346 (422)
Q Consensus 277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~ 346 (422)
+++|.++ .| +.+|.+++++++.+.+.. ...+|+.++++.+++.+.|+.-+-.+..++.++.-+++.
T Consensus 279 ---~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~ 354 (449)
T PRK07481 279 ---CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLL 354 (449)
T ss_pred ---EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3589987 67 589999999999887753 123467889988888888753111114444555555555
Q ss_pred HHHcc----CCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014594 347 KLLKD----VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP 408 (422)
Q Consensus 347 ~~L~~----~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~ 408 (422)
+.|++ ++.+.-....|.++.+++... .+ ...+.+.+.++||++.+.. +.+||+.. +.
T Consensus 355 ~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~ 429 (449)
T PRK07481 355 EGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-----TKIILSPPLVIQR 429 (449)
T ss_pred HHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-----CEEEEECCCCCCH
Confidence 55544 443333456677777776321 01 3456777889999998753 35899855 45
Q ss_pred hhHHHHHHHHh
Q 014594 409 EHTDALMECLM 419 (422)
Q Consensus 409 ~~~~~l~~al~ 419 (422)
+++|++.++++
T Consensus 430 ~eid~~~~~l~ 440 (449)
T PRK07481 430 EDVDRIVDALD 440 (449)
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 327
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=5.4e-15 Score=138.66 Aligned_cols=304 Identities=15% Similarity=0.137 Sum_probs=205.6
Q ss_pred CCCCHHHHHHHhcCCCCCC-----CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594 107 YGPPPEVREALGQLKFPYI-----YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (422)
Q Consensus 107 ~~~~~~v~~al~~~~~~~~-----y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (422)
.++.+.+.+++........ -++. ...++++.+|+++|+ ++.+++..| -......+.+++.||.-|+-.+..|
T Consensus 154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNH 231 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNH 231 (519)
T ss_pred CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccc
Confidence 3456778888876432211 1222 257899999999996 577888887 3355566778899999999999999
Q ss_pred hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCC-----eEE-EEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCI-FLTSPNNPDGSIINDEDLLKILEM-P 247 (422)
Q Consensus 181 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i-~l~~p~NPtG~~~~~e~l~~i~~~-~ 247 (422)
......++..|+.+.-+.. -|...||+.+++ +++ |.+ ++......-|.+..+.++.++.+. .
T Consensus 232 aSi~~GaRLSgAtiRVfkH-----Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyk 306 (519)
T KOG1357|consen 232 ASLITGARLSGATTRVFRH-----NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYK 306 (519)
T ss_pred hheeccccccCceEEEEec-----CCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhcccc
Confidence 9999999999999888873 245555555532 222 233 334778899999999999999998 9
Q ss_pred CeEEEccCCccccCCCc---h--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C--CCcHHH
Q 014594 248 ILVVLDEAYTEFSGLES---R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y--NVSVAA 318 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~---~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~--~~~~~~ 318 (422)
.+++.||+|+-.+.+.. . ....+..+.+|.+++|+|+||.+| ||+.+++++++.++..... + .+|++.
T Consensus 307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppv 383 (519)
T KOG1357|consen 307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPV 383 (519)
T ss_pred EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHH
Confidence 99999999986553221 1 122334567799999999999887 9999999999988765433 1 334443
Q ss_pred HHHHHHHccC-----C-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 319 EVAACAALQN-----P-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 319 ~~aa~~~L~~-----~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
.......++. . +..+ ..+++.++..+++..|+..+++......+.-+.+-+-.+..-..+.+.|++++|.+..
T Consensus 384 aqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVv 463 (519)
T KOG1357|consen 384 AQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVV 463 (519)
T ss_pred HHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEE
Confidence 3334434432 1 2233 7788999999999999999876654445543332221122345677788877666654
Q ss_pred CC--C-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 392 YN--N-KELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 392 ~~--~-~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+ . +-.+..+|++.+.....|.+..+++.
T Consensus 464 vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~ 495 (519)
T KOG1357|consen 464 VGFPATPLLESRARFCLSASHTKEDLDRALEV 495 (519)
T ss_pred EeCCCchHHHhHHHhhhcccccHHHHHHHHHH
Confidence 33 3 44577889998754444555555543
No 328
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.65 E-value=5.3e-13 Score=129.70 Aligned_cols=291 Identities=13% Similarity=0.122 Sum_probs=187.1
Q ss_pred CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHHHHHHcCCEEEEec---
Q 014594 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP--- 198 (422)
Q Consensus 124 ~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~--- 198 (422)
..| .++...+|++++++++|.+ +++.+++++.|+.+++...+++||.| +..+|. .........|+..+.+.
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE 147 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence 346 5678899999999999964 79999999999999877778999965 555454 33333567888666553
Q ss_pred -------CCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCcc-CcCCCH---HHHHHHHcC-CCeEEEccCCccc----
Q 014594 199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIIND---EDLLKILEM-PILVVLDEAYTEF---- 259 (422)
Q Consensus 199 -------~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~---e~l~~i~~~-~~~li~Deay~~~---- 259 (422)
...++.+|++++++.+++. +++++.+.+++|.. |..+|. +++.++++. |+.||+|.++...
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 1346789999999999742 34567777788888 688865 555555655 9999999998632
Q ss_pred c------CCCchhhh----hhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCC-------CCcHHHHHH
Q 014594 260 S------GLESRMEW----VKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-------NVSVAAEVA 321 (422)
Q Consensus 260 ~------~~~~~~~~----~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~-------~~~~~~~~a 321 (422)
. +.+..+.. ...+. ...+.|++|.++.+ . .|++++ ++++.++++...-.| +++.-...+
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~a-D~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a 304 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSYA-DGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA 304 (460)
T ss_pred hcccccccCCCcHhHHhhhccCcC-cEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence 1 11222111 11122 36667899987644 1 377776 567888887764322 233323333
Q ss_pred HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe----C----CCCCHHHHHHHHH-hCCcEEEeC
Q 014594 322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV----T----SGMDAKKLKDDLA-KMGVMIRHY 392 (422)
Q Consensus 322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~----~----~~~~~~~~~~~L~-~~gI~v~~~ 392 (422)
+...|.+..-.+..++.....++|.+.|.+.|.-.+.|.+|.-++++. | ....+..+...|. +.||.-...
T Consensus 305 lAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~ 384 (460)
T PRK13237 305 MAIGIEESVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMER 384 (460)
T ss_pred HHhHHHhhchHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEee
Confidence 333343211112333334567888999988775455678887777753 2 1346778888876 788876421
Q ss_pred CC------C-CC------CCeEEEEec----ChhhHHHHHHHHhhh
Q 014594 393 NN------K-EL------KGYVRVSVG----KPEHTDALMECLMHL 421 (422)
Q Consensus 393 ~~------~-~~------~~~iRis~~----~~~~~~~l~~al~~l 421 (422)
+. + .. -..+|+.+. +..++|.+.+++..+
T Consensus 385 g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 385 GIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred cceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence 11 1 11 257999976 456677777777654
No 329
>PRK06917 hypothetical protein; Provisional
Probab=99.65 E-value=3.6e-13 Score=134.02 Aligned_cols=325 Identities=15% Similarity=0.137 Sum_probs=197.5
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-CC----CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~~----~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
..+++.+||+..+. ..+ ..+|+|.+++.+ +.. .+ .|+.+...+|.+.|++.+....+.+++++++++|++.
T Consensus 27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 106 (447)
T PRK06917 27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET 106 (447)
T ss_pred eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence 35678899998773 234 357889888876 321 11 2333445678888888775444689999999999999
Q ss_pred HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCC----CC--------CHH
Q 014594 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (422)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~ 208 (422)
+++... .+| .+|+....+|++....+.. .|. .+..++..... .- +++
T Consensus 107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT 186 (447)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence 999541 133 6799999999765543322 221 11112211100 01 245
Q ss_pred HHHHHhhc---CCCeEEEEeCCCC-ccCcCC-CHHHHHH---HHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEE
Q 014594 209 LIADAVER---EKPKCIFLTSPNN-PDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV 277 (422)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~N-PtG~~~-~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~ 277 (422)
.+++.+.+ +++.+|++..... --|.+. +.+-+.+ +|+. |+++|.||++..|...+... ...+..+++
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi-- 264 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI-- 264 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE--
Confidence 66777653 3578888885543 345555 4544444 4554 99999999999875333221 222223333
Q ss_pred EccChhhhccccc-cceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc
Q 014594 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK 350 (422)
Q Consensus 278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 350 (422)
.+++|.++ .|+ .+|.+++++++.+.+... ..+|+.++++.+++.+.|+.-+-.+..++.+++-++|.+.|+
T Consensus 265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~ 342 (447)
T PRK06917 265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQ 342 (447)
T ss_pred -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 35689987 775 899999999998877532 134678899888888887531100144455555555555554
Q ss_pred c----CCCCcccCCCceEEEEEeCCC------C-----CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Chh
Q 014594 351 D----VPFLNPYPSYSNFILCEVTSG------M-----DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPE 409 (422)
Q Consensus 351 ~----~~~~~~~p~~~~f~~~~~~~~------~-----~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~ 409 (422)
+ .+.+.-....|.++.+++... . -...+.+.+.++||++.+... ....+.+|++.. +++
T Consensus 343 ~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~ 422 (447)
T PRK06917 343 KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYS 422 (447)
T ss_pred HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHH
Confidence 4 443333456677777766211 1 145677788899999987532 122478999865 344
Q ss_pred hHHHHHHHHh
Q 014594 410 HTDALMECLM 419 (422)
Q Consensus 410 ~~~~l~~al~ 419 (422)
+++++.++++
T Consensus 423 eid~~~~~l~ 432 (447)
T PRK06917 423 ELDELLSIFA 432 (447)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 330
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=1.2e-13 Score=137.78 Aligned_cols=317 Identities=12% Similarity=0.111 Sum_probs=195.0
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCC-----CCCCEEEeCCHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD 156 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~-----~~~~i~~~~G~~ 156 (422)
..+++.+||+..+. ..+ ..+|++.+++.+ + .+.. .++.+...+|-+.|++.+.. +.+.++++++++
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS 139 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS 139 (472)
T ss_pred eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence 35678899998773 333 357888888865 2 2221 23444456777777777642 235899999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCchhHHHHHHHc-CC------------EEEEecCCCCC----CC------
Q 014594 157 ELIDLIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------ 205 (422)
Q Consensus 157 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~----~~------ 205 (422)
+|++.+++.... +| .+|+....+|++....+... |. .+..+|..+.+ +.
T Consensus 140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~ 219 (472)
T PRK08742 140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence 999999995421 22 67999999997655433322 11 12223321111 11
Q ss_pred --CHHHHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHH---HHHcC-CCeEEEccCCccccCCCch--hhhhhcCC
Q 014594 206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESR--MEWVKKHD 273 (422)
Q Consensus 206 --d~~~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~---~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~ 273 (422)
+++.+++.+.+ .++.+|++.. ..+-.|.+. +.+-++ ++|+. |+++|.||++..|...+.. ....+..+
T Consensus 220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~P 299 (472)
T PRK08742 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMP 299 (472)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCC
Confidence 25667777642 4677888775 466678755 444444 44554 9999999999988643322 22222234
Q ss_pred cEEEEccChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHH
Q 014594 274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKE 341 (422)
Q Consensus 274 ~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~ 341 (422)
++++ ++|.++ .| +.+|.+++++++.+.+.. ...+|+.++++.+++.+.|+- ++..+ +.++.
T Consensus 300 Div~---~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~---~~~~~ 372 (472)
T PRK08742 300 DLLC---LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIA---RNQPT 372 (472)
T ss_pred CEEE---Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHH---HHHHH
Confidence 4443 589987 78 489999999999887642 223477889988888888753 33333 33333
Q ss_pred HHHH---HHHHccCCCCcccCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-
Q 014594 342 RERL---FKLLKDVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG- 406 (422)
Q Consensus 342 ~~~l---~~~L~~~~~~~~~p~~~~f~~~~~~~~~------~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~- 406 (422)
.+++ .+.+++++.+.-....|.++-+++.... + ...+.+.+.++||++.+.+ +.|||...
T Consensus 373 g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~vi~~~PpL 447 (472)
T PRK08742 373 AARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-----DVLYWMPPY 447 (472)
T ss_pred HHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCC
Confidence 3333 3334445544444677888878774210 1 2456777889999998753 68999976
Q ss_pred --ChhhHHHHHHHHh
Q 014594 407 --KPEHTDALMECLM 419 (422)
Q Consensus 407 --~~~~~~~l~~al~ 419 (422)
++++++++.+.++
T Consensus 448 ~it~~ei~~~~~~l~ 462 (472)
T PRK08742 448 CVDEAQLALLADTTR 462 (472)
T ss_pred CCCHHHHHHHHHHHH
Confidence 4444444444443
No 331
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.65 E-value=3.6e-13 Score=118.62 Aligned_cols=301 Identities=20% Similarity=0.232 Sum_probs=208.2
Q ss_pred CCHHHHHHHhcCCCCCC---C---------CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 014594 109 PPPEVREALGQLKFPYI---Y---------PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176 (422)
Q Consensus 109 ~~~~v~~al~~~~~~~~---y---------~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~ 176 (422)
.+++.++++.+...++. | ..|....+.+.+++++|. |.+-+|+|+.++=++++.+++++||.|++.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--D~~R~t~GARe~KfavMhal~~~gd~vV~D 106 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--DEVRVTAGAREAKFAVMHALCKEGDWVVVD 106 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--ceeeecccchhhHHHHHHHhccCCCEEEEc
Confidence 46788888866422110 1 123456788889999997 468899999999999999999999999999
Q ss_pred CCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594 177 PPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (422)
Q Consensus 177 ~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~ 247 (422)
...|....-+++.+|.++..||.. +++.++++...+.|.+ ..+.+.++++|....|.+.+.+.+.+||+. |
T Consensus 107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~g 186 (382)
T COG1103 107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYG 186 (382)
T ss_pred CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcC
Confidence 998876667888999999999932 5678888888777743 237788889999999999999999999998 9
Q ss_pred CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-CC--------CCCcHH-
Q 014594 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QP--------YNVSVA- 317 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-~~--------~~~~~~- 317 (422)
+.++...+|.-... .......+.+++++|-+|+++ +.-.+|.+....++.+.+.+.. .. ++....
T Consensus 187 vPlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rG 261 (382)
T COG1103 187 VPLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRG 261 (382)
T ss_pred CceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccC
Confidence 99999999984322 111223455689999999997 4458999999999988877655 21 122211
Q ss_pred -HHHHHHHHccCChHHH---HHHHHHHHHHHHHHHHccCCCCc---ccCCCceEEEEEeCC--------CCCHHHHHHHH
Q 014594 318 -AEVAACAALQNPIYLE---VKEALIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTS--------GMDAKKLKDDL 382 (422)
Q Consensus 318 -~~~aa~~~L~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~---~~p~~~~f~~~~~~~--------~~~~~~~~~~L 382 (422)
......+.+ +.-.+ .++.--++.+++.+.|++++++. ..|...-.+.++.|. ....--+++.|
T Consensus 262 apivTlmASf--P~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~EL 339 (382)
T COG1103 262 APIVTLMASF--PHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEEL 339 (382)
T ss_pred chHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHH
Confidence 111111111 22122 44444566778888888887543 234444455555541 11122356777
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014594 383 AKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l 421 (422)
+++||.- -.++...++.+|+ + +.++.+.+.++++.|
T Consensus 340 K~RgI~G---I~~G~Tk~~K~svyGl~~Eqve~V~~afkeI 377 (382)
T COG1103 340 KKRGIHG---IQPGQTKYFKLSVYGLSWEQVEYVVDAFKEI 377 (382)
T ss_pred HhcCccc---cccCceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 7777642 2234578999996 3 456677778877765
No 332
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.64 E-value=5.4e-16 Score=144.65 Aligned_cols=250 Identities=22% Similarity=0.238 Sum_probs=170.7
Q ss_pred CCHHHHHHHhcCCCC-CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch---hH
Q 014594 109 PPPEVREALGQLKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MY 183 (422)
Q Consensus 109 ~~~~v~~al~~~~~~-~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~ 183 (422)
+.|++++++.+...+ ..|. ++...++++.+++++|. +..+++.+++.+..++++++++|++.|++..++|. ..
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 678999999764322 3584 55688999999999995 46679999999999999999999999999999884 22
Q ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc-CcCCCHHHHHHHHcC----CCeEEEc
Q 014594 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD 253 (422)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~~----~~~li~D 253 (422)
.......|++++.++.+++..+|+++|++.+.. .++++|+|++|+|-. |.+++.+++++|.+. |+.++.|
T Consensus 85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD 164 (290)
T PF01212_consen 85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD 164 (290)
T ss_dssp THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence 334456999999999766468999999999975 468999999999953 999999999999875 9999999
Q ss_pred cCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCC----c-HHHH-----HH
Q 014594 254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNV----S-VAAE-----VA 321 (422)
Q Consensus 254 eay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~----~-~~~~-----~a 321 (422)
.+-..-.- .+..+..+..+ .+++..|++|..++++ -+.++++++++++..+.....+. . .+.. .+
T Consensus 165 GARl~~a~~~~~~~~~e~~~~-~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~ 241 (290)
T PF01212_consen 165 GARLANAAAALGVSLAEIAAG-ADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFA 241 (290)
T ss_dssp ETTHHHHHCHHHHHHHHHHTT-SSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred hhhHHHhhhcccccHHHHhhh-CCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHH
Confidence 98643211 01112222222 3355668999887765 46777899977665444332111 1 1111 12
Q ss_pred HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEE
Q 014594 322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFI 365 (422)
Q Consensus 322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~ 365 (422)
+...+ +.|.....+-.++.++|.+.|+.+++..+.|..++-+
T Consensus 242 ~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~~ 283 (290)
T PF01212_consen 242 ALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPRPVETNQV 283 (290)
T ss_dssp HHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEETTSS-HHH
T ss_pred HHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEE
Confidence 33333 3445566667788999999999988665555555433
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.64 E-value=1.8e-13 Score=136.40 Aligned_cols=315 Identities=17% Similarity=0.139 Sum_probs=190.3
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+++.+||+..+..+ + ..+|+|.+++.+ +.....+ +.+...+|-+.|++.... .+.+.+++++++|.+.+++
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk 173 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR 173 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence 4557788999776433 3 357889888876 3322222 333455777777777653 5799999999999999999
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHH--HHH-cCC-----------------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~g~-----------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (422)
.-. ...++|+....+|++.... +.. .|. .++.+| + -|++.+++.+.+ .++.
T Consensus 174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~~~iA 248 (474)
T PLN02482 174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----Y-NDLEAVKKLFEANKGEIA 248 (474)
T ss_pred HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----C-CChHHHHHHHHhCCCceE
Confidence 432 2236788888888875422 111 010 011111 1 278899888853 3567
Q ss_pred EEEEeCCCCccCcCCCHH----HHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhcccccccee
Q 014594 221 CIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
+|++.......|.+.+.+ .+.+||+. |+++|+||++..|..+... ....+..+++ .+|+|.+| .|+.+|.
T Consensus 249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi---~t~gK~lg-gG~Piga 324 (474)
T PLN02482 249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDL---TTLGKVIG-GGLPVGA 324 (474)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCE---EEecchhh-CCCceEE
Confidence 888777777788887744 56777776 9999999999877432211 1112222332 36799998 7899999
Q ss_pred eecCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcc-cCCCceE
Q 014594 295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNP-YPSYSNF 364 (422)
Q Consensus 295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~-~p~~~~f 364 (422)
+++++++++.+.... ..|+.++++..++.+.|+.-+-.+..++++++-+++.+.|+++ +...+ ..-.+ +
T Consensus 325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g-~ 403 (474)
T PLN02482 325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG-M 403 (474)
T ss_pred EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-E
Confidence 999999998875321 2356788888888777653211014555555566666655543 21111 12233 3
Q ss_pred EEEEeCC--C--------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594 365 ILCEVTS--G--------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 420 (422)
Q Consensus 365 ~~~~~~~--~--------~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 420 (422)
+.+.+.. . .+ ...+.+.|.++||++.+..... ++ +++. +++++|++.+++++
T Consensus 404 ~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~--~~--psl~ht~~dId~~l~al~~ 469 (474)
T PLN02482 404 FGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA--GF--TSLAHTEEDIDFTIAAAER 469 (474)
T ss_pred EEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC--Cc--CCCCCCHHHHHHHHHHHHH
Confidence 2233311 0 12 2467788889999998754311 12 3433 34455555555543
No 334
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.64 E-value=9.2e-14 Score=127.88 Aligned_cols=220 Identities=18% Similarity=0.215 Sum_probs=161.4
Q ss_pred CCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEE
Q 014594 123 PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVV 195 (422)
Q Consensus 123 ~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~ 195 (422)
++.| .+|....|++.|+.+-|- ---+.+.+++.|+..++..++++||.|+..+--|. .+....+..|+++.
T Consensus 53 G~iYsRi~NPT~~vlE~RiAaLEGG--~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~ 130 (426)
T COG2873 53 GNIYTRIMNPTTDVLEERIAALEGG--VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVR 130 (426)
T ss_pred CceeeeccCchHHHHHHHHHHhhcc--hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEE
Confidence 4555 466778999999999863 23567788899999999999999999998887775 44455677999999
Q ss_pred EecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCc
Q 014594 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN 274 (422)
Q Consensus 196 ~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~ 274 (422)
+++ ..|++.++++++ ++||+|++.+..||-+.+.+.|.+.+||+. |+.+|+|..+.. +-.+. .-+++.
T Consensus 131 fvd-----~~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at----pyl~r-P~~hGA 199 (426)
T COG2873 131 FVD-----PDDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT----PYLCR-PIEHGA 199 (426)
T ss_pred EeC-----CCCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc----ceecc-hhhcCC
Confidence 997 346999999998 899999999999999999999999999998 999999998772 21111 125667
Q ss_pred EEEEccChhhhccccccceeeecCHHHHHHH-----HHhcCC------------CCCcHHHHHHHHHHccC---------
Q 014594 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-----WRAKQP------------YNVSVAAEVAACAALQN--------- 328 (422)
Q Consensus 275 ~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-----~~~~~~------------~~~~~~~~~aa~~~L~~--------- 328 (422)
.|++.|.||..|-.|--+|-++++..-.+.- .....+ ++...+...+-...|+|
T Consensus 200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn 279 (426)
T COG2873 200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN 279 (426)
T ss_pred CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence 7999999998888888888777643222211 111111 12222333333333443
Q ss_pred -------ChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594 329 -------PIYLE-VKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 329 -------~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
-|-+. +.++..++...+.+.|+.++.+
T Consensus 280 Afl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV 314 (426)
T COG2873 280 AFLLLQGLETLSLRMERHCENALKVAEFLENHPKV 314 (426)
T ss_pred HHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCe
Confidence 13344 7888999999999999987543
No 335
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1.6e-13 Score=136.93 Aligned_cols=320 Identities=14% Similarity=0.162 Sum_probs=197.3
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++.+||+..+. ..+ ..+|+|.+++.+ +. +.. .++.+...+|.+.|++.+....+.+++++++++|++.
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~ 131 (460)
T PRK06916 52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI 131 (460)
T ss_pred eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34578899987763 223 457888888865 32 221 2344445678888888875434689999999999999
Q ss_pred HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CC--------CCHH
Q 014594 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE 208 (422)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~ 208 (422)
+++... .+| .+|+....+|++....+.. .|. .+..+|.... +. -+++
T Consensus 132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~ 211 (460)
T PRK06916 132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211 (460)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 999542 233 6789999999865443322 121 1222331110 11 1356
Q ss_pred HHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (422)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~ 278 (422)
.+++.+.+ +++.+|++.. +..-.|.+. +.+-++++ |+. |+++|.||++..|...+... ...+..++++
T Consensus 212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv-- 289 (460)
T PRK06916 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM-- 289 (460)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee--
Confidence 66777642 4678888886 466678765 55555544 444 99999999998875433221 1222233333
Q ss_pred ccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL 348 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~ 348 (422)
+++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.
T Consensus 290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~ 367 (460)
T PRK06916 290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQ 367 (460)
T ss_pred -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4689987 78 599999999999887642 12246778888888888875311101455566666666666
Q ss_pred HccC---CCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594 349 LKDV---PFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT 411 (422)
Q Consensus 349 L~~~---~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~ 411 (422)
|+++ +.+.-....|.++-+++.+.. + ...+...+.++||++.+.. +.+|+... +.+++
T Consensus 368 l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~l~~~Ppl~it~~~i 442 (460)
T PRK06916 368 LEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-----NTIVFMPPLASTIDEL 442 (460)
T ss_pred HHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHH
Confidence 6553 322223455666666663210 1 2467788889999998753 58899855 34444
Q ss_pred HHHHHHHh
Q 014594 412 DALMECLM 419 (422)
Q Consensus 412 ~~l~~al~ 419 (422)
+++.++++
T Consensus 443 d~~~~~l~ 450 (460)
T PRK06916 443 DEMLRILY 450 (460)
T ss_pred HHHHHHHH
Confidence 44444443
No 336
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.62 E-value=9.6e-13 Score=130.14 Aligned_cols=297 Identities=19% Similarity=0.177 Sum_probs=188.2
Q ss_pred CCHHHHHHHhcC-C-CC-CCC--C--Ccc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 109 PPPEVREALGQL-K-FP-YIY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 109 ~~~~v~~al~~~-~-~~-~~y--~--~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
.++++.+++.+. . +. ..| . ..+ ...+++.+++++|.+ ..+++++++.++..++. .+.+||+|+++...
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e 169 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--DALVVNNNAAAVLLALN-TLAKGKEVIVSRGE 169 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence 468888888762 2 11 112 1 112 478999999999964 35567778888988886 46889999999876
Q ss_pred chh------HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc--C--cCCCHHHHHHHHcC-CC
Q 014594 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI 248 (422)
Q Consensus 180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~e~l~~i~~~-~~ 248 (422)
|.. +....+..|++++.++.++ ..|+++++++++ ++|++|++++++|++ | ...+.+++.++++. |+
T Consensus 170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~ 246 (454)
T TIGR00474 170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL 246 (454)
T ss_pred hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence 432 2345567899999997532 357999999997 789999999999995 6 58899999999997 99
Q ss_pred eEEEccCCccccC-------CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHH
Q 014594 249 LVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE 319 (422)
Q Consensus 249 ~li~Deay~~~~~-------~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~ 319 (422)
++++|....-+.. ...........+.++++.|.+|.+|.+ ..|++++++++++++....- ...+.....
T Consensus 247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~l 324 (454)
T TIGR00474 247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTL 324 (454)
T ss_pred eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHH
Confidence 9999976332211 011111222345568999999987544 47999999998877653211 012222222
Q ss_pred HHHHHH----ccC-ChH--------HH-HHHHHHHHHHHHHHHHccC--CCC--cccCC-----Cc-------eEEEEEe
Q 014594 320 VAACAA----LQN-PIY--------LE-VKEALIKERERLFKLLKDV--PFL--NPYPS-----YS-------NFILCEV 369 (422)
Q Consensus 320 ~aa~~~----L~~-~~~--------~~-~~~~~~~~~~~l~~~L~~~--~~~--~~~p~-----~~-------~f~~~~~ 369 (422)
.+..+. +.. ..| +. ..+++.++...+.+.|++. +.+ .+.+. +| .-.-+.+
T Consensus 325 a~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~ 404 (454)
T TIGR00474 325 AALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTL 404 (454)
T ss_pred HHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEE
Confidence 222222 221 112 22 4456777888888888763 222 12111 11 1112333
Q ss_pred -CCCCCHHHHHHHHHhCC--cEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHH
Q 014594 370 -TSGMDAKKLKDDLAKMG--VMIRHYNNKELKGYVRVSVGK--PEHTDALMECL 418 (422)
Q Consensus 370 -~~~~~~~~~~~~L~~~g--I~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al 418 (422)
+.+.++.++.+.|++.. |+.+-. ++.+-+-+.+ +.+.+.+.+++
T Consensus 405 ~~~~~~~~~l~~~lr~~~~~ii~r~~-----~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 405 TPDGLSAEKLEARLRELPPPIIGRIE-----DDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred ecCCCCHHHHHHHHhcCCCCEEEEEE-----CCEEEEEeCcCCHHHHHHHHHHh
Confidence 23668899999998665 555532 4677777765 34455555544
No 337
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.61 E-value=2.2e-13 Score=129.82 Aligned_cols=322 Identities=20% Similarity=0.131 Sum_probs=201.5
Q ss_pred hCCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 90 LGRKPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
++.+++.+||+..+-.|. ..+|.|.+|+.+ +..+..|..| ..-++-+.+.+.++. .+.|-+++++|||...++
T Consensus 48 ~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAi 126 (432)
T COG0001 48 TDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAI 126 (432)
T ss_pred EeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHH
Confidence 345678889998877665 357889999987 5556666444 345677778777773 479999999999999988
Q ss_pred HHh--cCCCCEEEEcCCCchhHHHHHHH-cC--CEEEEecCC----CC--------CCCCHHHHHHHhhcC--CCeEEEE
Q 014594 164 RCV--LDPGDKIVDCPPTFTMYEFDAAV-NG--AAVVKVPRK----SD--------FSLNVELIADAVERE--KPKCIFL 224 (422)
Q Consensus 164 ~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~v~~~----~~--------~~~d~~~l~~~i~~~--~~~~i~l 224 (422)
+.- ...-|+|+..+.+|+...+.+.. .| ..-...|.. .+ ---|++.+++++++. +..+|++
T Consensus 127 RlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIv 206 (432)
T COG0001 127 RLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIV 206 (432)
T ss_pred HHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEe
Confidence 832 22338999999999876655443 22 111111100 00 013799999999753 7888888
Q ss_pred eCCCCccCcCCCHHH----HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 225 TSPNNPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~----l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
.....-.|.+.|.++ |++|++. |.++|.||+...|......... .++..--+.+|.|..| .|+.+|.+.++.
T Consensus 207 EPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~--~~gi~PDlttlGKiIG-GGlP~ga~gGr~ 283 (432)
T COG0001 207 EPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG--YYGVEPDLTTLGKIIG-GGLPIGAFGGRA 283 (432)
T ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc--ccCcCcchhhhhhhhc-CCcceeeeccHH
Confidence 844433788777643 4555665 9999999999988643211111 1111123446889998 999999999999
Q ss_pred HHHHHHHHhcC-----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc----cCCCC-cccCCCceEEEEE
Q 014594 300 SIIEYLWRAKQ-----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK----DVPFL-NPYPSYSNFILCE 368 (422)
Q Consensus 300 ~~~~~l~~~~~-----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~----~~~~~-~~~p~~~~f~~~~ 368 (422)
++++.+..... .++.|+++..|..+.|+.-.-.+ ..+++.+..++|.+.|+ +.+.- .+...+++|-+.-
T Consensus 284 eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F 363 (432)
T COG0001 284 EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFF 363 (432)
T ss_pred HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEe
Confidence 99998765543 25678888888887776422111 44455555555555554 44422 2333444443221
Q ss_pred eCC-CC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594 369 VTS-GM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 419 (422)
Q Consensus 369 ~~~-~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 419 (422)
.+. .. + ...+.+.|+++||++.|... +.++ +|.. +++++|+..++++
T Consensus 364 ~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~f-lS~ahte~di~~~~~a~~ 423 (432)
T COG0001 364 TEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGF-LSTAHTEEDIDRTLEAAD 423 (432)
T ss_pred cCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---ccee-eecccCHHHHHHHHHHHH
Confidence 110 11 1 23456678899999998752 2222 4554 3455555555554
No 338
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.61 E-value=7.8e-14 Score=134.66 Aligned_cols=262 Identities=17% Similarity=0.174 Sum_probs=162.0
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~-- 203 (422)
|..-..+-++.+|+.||.+ ...++++|+|.++.+++.+++++||+|+++..+|-+........|+++++++.. +.+
T Consensus 64 p~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred CccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence 3334678999999999964 578999999999999999999999999999999998888888999999998742 222
Q ss_pred --CCCH-----HHHHHHhhc-CCCeE---EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhh-
Q 014594 204 --SLNV-----ELIADAVER-EKPKC---IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWV- 269 (422)
Q Consensus 204 --~~d~-----~~l~~~i~~-~~~~~---i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~- 269 (422)
.+++ +.+++++++ +..|+ +++++|+- .|.+++.++|.+++.. ++.|++||||... .+.+-.....
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 3455 999999864 34444 99999976 9999999999999998 9999999999753 2332111111
Q ss_pred -----hcCCcEEEEccChhhhcccccccee-eecCH------HHHHHHHHhcCCCCCcHHH---HHHHHHHccCChHHHH
Q 014594 270 -----KKHDNLIVLRTFSKRAGLAGLRVGY-GAFPL------SIIEYLWRAKQPYNVSVAA---EVAACAALQNPIYLEV 334 (422)
Q Consensus 270 -----~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~------~~~~~l~~~~~~~~~~~~~---~~aa~~~L~~~~~~~~ 334 (422)
.....++++.|.+|.+ +++.-+. +..+. +-+++.....+..++|-+. ...+...++..+..+.
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l 299 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGREL 299 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHH
Confidence 1123569999999975 6766554 44322 3333333344444555443 3333344422222224
Q ss_pred HHHHHHHHHHHHHHH---ccCCCCccc-C-----CC------------------ceE------EEEEeC----------C
Q 014594 335 KEALIKERERLFKLL---KDVPFLNPY-P-----SY------------------SNF------ILCEVT----------S 371 (422)
Q Consensus 335 ~~~~~~~~~~l~~~L---~~~~~~~~~-p-----~~------------------~~f------~~~~~~----------~ 371 (422)
.++..++.+.+++.+ +++.++.+. | .. +.+ +.+..| .
T Consensus 300 ~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~ 379 (417)
T PF01276_consen 300 LEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSEL 379 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCccccc
Confidence 444455555555555 555444321 1 11 122 335543 2
Q ss_pred CCCHHHHHHHHHhCCcEEEeC
Q 014594 372 GMDAKKLKDDLAKMGVMIRHY 392 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~ 392 (422)
|.++..+.++|+++||.+.-.
T Consensus 380 Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 380 GIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp ---HHHHHHHHHHTTEE-SEE
T ss_pred CCCHHHHHHHHHHcCCEEEec
Confidence 567888999999999998643
No 339
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.60 E-value=6.9e-13 Score=132.38 Aligned_cols=322 Identities=17% Similarity=0.168 Sum_probs=193.7
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCC---CCEEEe-CCHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLES---DHILVG-CGADE 157 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~---~~i~~~-~G~~~ 157 (422)
..+++.+||+..+.. .+ ..+|++.+++.+ +... ..++.+...+|-+++.+.....- +.++++ +++++
T Consensus 59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 456788999977742 23 357888888876 3211 12333444566666666654211 357665 79999
Q ss_pred HHHHHHHHhc-CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC------------CCHHHH
Q 014594 158 LIDLIMRCVL-DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVELI 210 (422)
Q Consensus 158 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~------------~d~~~l 210 (422)
|++.+++... -+| .+|+....+|++....+.. .|. .+..++.+..+. .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 9999999432 133 6788888888765443322 110 123333221111 136777
Q ss_pred HHHhhc-----CCCeEEEEeCCCCccCcCCC-HHHH---HHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594 211 ADAVER-----EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (422)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~~~~-~e~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~ 278 (422)
++.+.+ +++.+|++.....-.|.+.+ .+-+ +++|+. |+++|.||++..|...+... ...+-.++++
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv-- 296 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV-- 296 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE--
Confidence 887753 25788888866665677665 4444 445555 99999999999886444322 1222234444
Q ss_pred ccChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----V 352 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~ 352 (422)
+++|.++ .|+.+|.+++++++ +.+.. ...+|+.|+++.+++.+.|+.-+-.+..++.++.-+++.+.|++ +
T Consensus 297 -~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~ 373 (464)
T PRK06938 297 -VLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDY 373 (464)
T ss_pred -Eeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3589997 78999999998774 44321 22457789999988888885321111344444555555555543 4
Q ss_pred CCCcccCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594 353 PFLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 415 (422)
Q Consensus 353 ~~~~~~p~~~~f~~~~~~~~~-----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 415 (422)
+.+.-....|.++.+++.... + ...+.+.+.++|+++.+... ..+.+|+... +.++++++.
T Consensus 374 ~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~--~~~~l~~~Ppl~it~~eid~~~ 451 (464)
T PRK06938 374 PQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGR--HGSVVRFLPPLIITAEQIDEVA 451 (464)
T ss_pred CCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCccCHHHHHHHH
Confidence 544434567788878773210 1 34567778899999986431 2478999855 445555555
Q ss_pred HHHh
Q 014594 416 ECLM 419 (422)
Q Consensus 416 ~al~ 419 (422)
++++
T Consensus 452 ~~l~ 455 (464)
T PRK06938 452 EIFA 455 (464)
T ss_pred HHHH
Confidence 5544
No 340
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.59 E-value=3.4e-13 Score=133.67 Aligned_cols=315 Identities=16% Similarity=0.160 Sum_probs=187.5
Q ss_pred CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhcC--C----CCCCCCCcchHHHHHHHHH----HcCCCCCCEEEeCCHHH
Q 014594 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE 157 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~~--~----~~~~y~~~~~~~lr~~la~----~~~~~~~~i~~~~G~~~ 157 (422)
+.+++.+||+..+... + ..+|.+.+++.+. . ....|+.+...++.+.+++ ...-+.+.+++++++++
T Consensus 54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE 133 (464)
T TIGR00699 54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD 133 (464)
T ss_pred eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence 4567889999887433 2 4578888888752 1 1122343334556666654 33323368999999999
Q ss_pred HHHHHHHHhcC--------------------------CC---CEEEEcCCCchhHHHHHHH-cCCE-----------EEE
Q 014594 158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGAA-----------VVK 196 (422)
Q Consensus 158 al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~g~~-----------~~~ 196 (422)
|++.+++.... +| .+|+....+|++....+.. .|-. ...
T Consensus 134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~ 213 (464)
T TIGR00699 134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ 213 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence 99999995410 11 2699999999765544332 2211 111
Q ss_pred ecCCC-C--C-----------CCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccC
Q 014594 197 VPRKS-D--F-----------SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 197 v~~~~-~--~-----------~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Dea 255 (422)
+|... . + .-+++.+++.+.+ .++.+|++.......|.+.+ .++++++|+. |+++|+||+
T Consensus 214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV 293 (464)
T TIGR00699 214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV 293 (464)
T ss_pred cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence 22111 0 0 0135667777743 46788988877777899887 6777777776 999999999
Q ss_pred CccccCCCch--hhhhhc--CCcEEEEccChhhhccccccceeeecCHHHHHHHH--HhcCCCCCcHHHHHHHHHHccC-
Q 014594 256 YTEFSGLESR--MEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQN- 328 (422)
Q Consensus 256 y~~~~~~~~~--~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~--~~~~~~~~~~~~~~aa~~~L~~- 328 (422)
+..|...+.. ....+- .+++ .+++|.++.. |+++..+ .+.... ....+|..++++.+++.+.|+.
T Consensus 294 ~tGfGrtG~~fa~e~~gv~~~PDi---~t~gK~lg~g----G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l 365 (464)
T TIGR00699 294 QTGVGATGKFWAHEHWNLDDPPDM---VTFSKKFQTA----GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEI 365 (464)
T ss_pred eeCCCCCcchhHHHhcCCCCCCCE---EEehhhhccC----Cccccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 9888643332 111111 1333 3568988523 4444432 221100 1223467788888888777642
Q ss_pred --ChHHHHHHHHHHHHHHHHHHHc----cCC-CCcccC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594 329 --PIYLEVKEALIKERERLFKLLK----DVP-FLNPYP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG 399 (422)
Q Consensus 329 --~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p--~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 399 (422)
++ ..++.+++-+++.+.|+ +++ .+.... ..|.++-++++.......+.+.+.++||++.... .+
T Consensus 366 ~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g----~~ 438 (464)
T TIGR00699 366 KRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCG----VK 438 (464)
T ss_pred HhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCC----CC
Confidence 23 34444444444444444 344 232233 5678888888632235678888899999997742 47
Q ss_pred eEEEEec---ChhhHHHHHHHHhh
Q 014594 400 YVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 400 ~iRis~~---~~~~~~~l~~al~~ 420 (422)
.+||... +.++++.+.+++++
T Consensus 439 ~ir~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 439 AIRLRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHH
Confidence 8999976 34445555555443
No 341
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.58 E-value=8.3e-13 Score=130.52 Aligned_cols=283 Identities=19% Similarity=0.162 Sum_probs=192.1
Q ss_pred CCHHHHHHHhc-C----CCCCCCCCcc--hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcC-----C---C--
Q 014594 109 PPPEVREALGQ-L----KFPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---G-- 170 (422)
Q Consensus 109 ~~~~v~~al~~-~----~~~~~y~~~~--~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~-----~---g-- 170 (422)
+++...+.+.. + .....||... ..++-..+++.++.+ ...=.+|.|+|+++.+.+.+..+ . +
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 34555555543 2 2223455321 234555566667774 33578999999999877765421 0 1
Q ss_pred ----CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCe-EEEEeCCCCccCcCCCHHHHHHHH
Q 014594 171 ----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 171 ----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~-~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
-+|+++.-.|..+...++..|.++..++... ++.+|++++++++.+.... +|+.+-++.+||.+=|.++|.+|+
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia 233 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIA 233 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHH
Confidence 1588999999999999999999999999665 7899999999999854333 277778999999999999999999
Q ss_pred cC-CCeEEEccCCccccC--CCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCCCC------
Q 014594 245 EM-PILVVLDEAYTEFSG--LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPYN------ 313 (422)
Q Consensus 245 ~~-~~~li~Deay~~~~~--~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~~~------ 313 (422)
+. ++++++|.||..|.. ...... ........-+..+++| ||..-..+||++.+.+ ...+......++.
T Consensus 234 ~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~ 312 (460)
T COG0076 234 EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIP 312 (460)
T ss_pred HHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcC
Confidence 97 999999999997652 122222 2222333445668999 6678888999998654 4444443322211
Q ss_pred -------Cc---HHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCC-HHHHHHH
Q 014594 314 -------VS---VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMD-AKKLKDD 381 (422)
Q Consensus 314 -------~~---~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~-~~~~~~~ 381 (422)
.+ .+.+.+....|..+++.++.++..+..+++.+.|++.+... +.++..+-+.+++++..+ ..+..+.
T Consensus 313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~ 392 (460)
T COG0076 313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER 392 (460)
T ss_pred ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence 11 23344444444445565588888899999999999997444 455677888899864333 4455566
Q ss_pred HHhCCcEEEeC
Q 014594 382 LAKMGVMIRHY 392 (422)
Q Consensus 382 L~~~gI~v~~~ 392 (422)
+.+.|..+...
T Consensus 393 ~~~~gw~v~~~ 403 (460)
T COG0076 393 LDRRGWQVPAQ 403 (460)
T ss_pred HHhcCceeecc
Confidence 66677777643
No 342
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=1.7e-12 Score=129.58 Aligned_cols=319 Identities=13% Similarity=0.163 Sum_probs=188.6
Q ss_pred CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC---C--CCCCcchHHHHHHHHHHcCCCC---CCEEEeCCHHHH
Q 014594 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLES---DHILVGCGADEL 158 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~---~--~y~~~~~~~lr~~la~~~~~~~---~~i~~~~G~~~a 158 (422)
..+++.+||+..+.. .+ ..+|++.+++.+ +... + .++.+...+|.+.+.+..+... ..+++++++++|
T Consensus 54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA 133 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA 133 (459)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence 456788999988742 22 457889988876 3211 1 1333344567777777764221 134666899999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC--------CCHHHH----H
Q 014594 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS--------LNVELI----A 211 (422)
Q Consensus 159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--------~d~~~l----~ 211 (422)
++.+++... ...++|+....+|++....+.. .| ..+..+|.++.+. -+.+.+ +
T Consensus 134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06931 134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE 213 (459)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 999999432 2336799899999866544432 11 1123333221111 122332 3
Q ss_pred HHhhc-----CCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEc
Q 014594 212 DAVER-----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLR 279 (422)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~ 279 (422)
+.+.+ .++.+|++.....-.|.+.+ . ++++++|+. |+++|.||++..|...+... ...+-.++++
T Consensus 214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv--- 290 (459)
T PRK06931 214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII--- 290 (459)
T ss_pred HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE---
Confidence 33321 34788888866666677664 4 344555655 99999999999886444321 1222233444
Q ss_pred cChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----
Q 014594 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK---- 350 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~---- 350 (422)
+++|.++ .|+.+|.+++++++ +.+.. ....|+.|+++.+++.+.|+. ++ ..++.++.-++|.+.|+
T Consensus 291 t~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~ 365 (459)
T PRK06931 291 VMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQK 365 (459)
T ss_pred Eeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHH
Confidence 4589998 78999988877664 54421 223477899998888888753 23 33444444444444443
Q ss_pred cCCCCcccCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594 351 DVPFLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA 413 (422)
Q Consensus 351 ~~~~~~~~p~~~~f~~~~~~~~~-----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~ 413 (422)
+++.+.-....|.++.+++.+.. + ...+...+.++||++.+... ..+.+|+..+ +.+++++
T Consensus 366 ~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid~ 443 (459)
T PRK06931 366 RYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGR--NGNVVRLLPPLLITQAECEE 443 (459)
T ss_pred hCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCcCHHHHHH
Confidence 45544444567778777773210 1 24566777899999986532 2478998876 3444444
Q ss_pred HHHHHh
Q 014594 414 LMECLM 419 (422)
Q Consensus 414 l~~al~ 419 (422)
+.++++
T Consensus 444 ~~~~l~ 449 (459)
T PRK06931 444 FIDRFE 449 (459)
T ss_pred HHHHHH
Confidence 444443
No 343
>PLN02263 serine decarboxylase
Probab=99.57 E-value=1.8e-12 Score=127.09 Aligned_cols=271 Identities=12% Similarity=-0.017 Sum_probs=181.1
Q ss_pred HHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHH
Q 014594 133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208 (422)
Q Consensus 133 ~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 208 (422)
++.+.+++++|.+++ .=++|+|||+++-.++.+-.+ +...|+++.-+|......++..|.+++.||.++++.+|++
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~ 216 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA 216 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence 455666666788654 358899999998887775432 3347888999999999999999999999998888899999
Q ss_pred HHHHHhhcCC--CeEEEEeCCCCccCcCCCHHHHHHHHcC-CC-----eEEEccCCccccC---CC-chhhhhhcCCcEE
Q 014594 209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSG---LE-SRMEWVKKHDNLI 276 (422)
Q Consensus 209 ~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~-----~li~Deay~~~~~---~~-~~~~~~~~~~~~i 276 (422)
+|++++.++. +-+|+.+-...++|.+=|.+++.++++. |+ |+.+|.+|..+.. .. ..... ..+..=
T Consensus 217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDS 294 (470)
T PLN02263 217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGS 294 (470)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccE
Confidence 9999997443 4566667889999999999999999986 75 9999999986542 11 01111 111223
Q ss_pred EEccChhhhccccccceeeecCHHHHHHHHHhcC-------CCCC--c---HHHHHHHHHHccCChHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------PYNV--S---VAAEVAACAALQNPIYLEVKEALIKERER 344 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------~~~~--~---~~~~~aa~~~L~~~~~~~~~~~~~~~~~~ 344 (422)
+..+.+|. +......|.++.+.+.++.+..... .... + .+...+....+...++.+..++..++.++
T Consensus 295 IsvD~HK~-l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~ 373 (470)
T PLN02263 295 VSVSGHKF-VGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHY 373 (470)
T ss_pred EEECCccc-cCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 44567895 4577889999988765543322110 1111 1 22223333333333444477888899999
Q ss_pred HHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh---hhHHHHHHHHh
Q 014594 345 LFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP---EHTDALMECLM 419 (422)
Q Consensus 345 l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~---~~~~~l~~al~ 419 (422)
+.+.|++.+...+..+..+.+.++-| +.+ ...+|..+... ++.++|.+... +..|+|.+.|+
T Consensus 374 l~~~l~~~g~~~~~~p~s~~V~f~~p---~~~-----~~~~gW~L~~~-----~~~~Hivvmphv~~~~id~fi~DL~ 438 (470)
T PLN02263 374 LKDRLREAGISAMLNELSSTVVFERP---KDE-----EFVRRWQLACQ-----GNIAHVVVMPSVTIEKLDYFLKELV 438 (470)
T ss_pred HHHHHHhCCCeEEeCCCceEEEEecC---chH-----HhhcceEEccC-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999998765555566666666654 111 12456666553 35689998753 33444444443
No 344
>PRK15029 arginine decarboxylase; Provisional
Probab=99.57 E-value=3.6e-12 Score=131.86 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=128.4
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~-- 203 (422)
|..-..+.++..|+.||.+ ...+++||+|.++.+++.+++++||+|+++..+|-+......+.|++++++..+ +.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 4444678999999999964 678999999999999999999999999999999998888888999999999732 122
Q ss_pred --CCC-----HHHHHHHhhc-CCCe--------EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCch
Q 014594 204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR 265 (422)
Q Consensus 204 --~~d-----~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~ 265 (422)
+++ ++.+++++.+ +..| ++++++|+- .|.+++.+++.+++.. ++.|++||||... .+.+..
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~ 360 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence 344 8999998854 2334 899999976 9999999999999987 9999999999763 333211
Q ss_pred h--hhh-----h-cCCcEEEEccChhhhccccccce-eeec
Q 014594 266 M--EWV-----K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF 297 (422)
Q Consensus 266 ~--~~~-----~-~~~~~i~~~S~SK~~~~~G~r~G-~i~~ 297 (422)
. ..+ . ....++++.|.+|.+ +++.-| ++..
T Consensus 361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 1 111 1 122349999999975 566655 4444
No 345
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.57 E-value=2e-12 Score=123.51 Aligned_cols=303 Identities=13% Similarity=0.044 Sum_probs=199.7
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCcc--hHHHHHHHHHHcCCCC-CCE-EEeCCHHHHHHH
Q 014594 98 VKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHI-LVGCGADELIDL 161 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~y~~~~--~~~lr~~la~~~~~~~-~~i-~~~~G~~~al~~ 161 (422)
++|+. .|-..|++|++++++ + + .+|+-+... ..+.++.+.++++++. .+| ++..|++.++++
T Consensus 6 ~nF~a--GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 6 LNFSG--GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred ceecC--CCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 44544 344457888887764 2 1 223334432 5678888888999843 245 555669999999
Q ss_pred HHHHhcCCCCEEE--EcCCCch-hHHHHHHHcCCEEEEecC----CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 162 IMRCVLDPGDKIV--DCPPTFT-MYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 162 ~~~~l~~~gd~Vl--~~~p~y~-~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
+...++.+||+++ +....|. .+...++..| ++..+.. +.+.-++++.+ .+. ++.+.|++|+....||+.
T Consensus 84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-~d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-ARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-CCCcEEEEccCCCCceEe
Confidence 9999999999654 5566664 4455666666 4444431 12234556665 222 467899999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---- 309 (422)
++ ++.+. +.++|+|.+-..++. +- .++++ .++..|..|.+|.+| ++.++.+++.+++.....
T Consensus 160 ~~-----~~~~~~~~llvvD~sS~~~s~-pi---d~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~l 226 (364)
T PRK12462 160 FP-----DAAGLPDSPLIADMSSDFMSR-PF---DVEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPML 226 (364)
T ss_pred cC-----cccccCCCeEEEEcCchhhCC-CC---ChHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhccccCCchh
Confidence 97 33333 889999988664332 11 12223 477778899999887 678888988887644211
Q ss_pred ---------C-CCCCcHHHHHHHHHHcc---CC-hHHH-HHHHHHHHHHHHHHHHccCCCCccc---C--CCceEEEEEe
Q 014594 310 ---------Q-PYNVSVAAEVAACAALQ---NP-IYLE-VKEALIKERERLFKLLKDVPFLNPY---P--SYSNFILCEV 369 (422)
Q Consensus 310 ---------~-~~~~~~~~~~aa~~~L~---~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p--~~~~f~~~~~ 369 (422)
. +++++....+++..+|+ +. +.++ +.++.+++.+.+++.+.+.++.... + ..-+-+.+++
T Consensus 227 dy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~ 306 (364)
T PRK12462 227 DFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRF 306 (364)
T ss_pred hHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEc
Confidence 1 23566777776666644 23 3567 8889999999999999998733221 1 1234566777
Q ss_pred CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 370 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 370 ~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
++.....+|.+.+.++|+.-..|.. .-+.+|+|+- ..+..+.|.+.++.+
T Consensus 307 ~~~~l~~~f~~~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f 359 (364)
T PRK12462 307 RQPRLDTLFKEQSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred CCHHHHHHHHHHHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence 6555567888889999988765542 2466999963 456677787777654
No 346
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.56 E-value=2.3e-12 Score=135.22 Aligned_cols=282 Identities=14% Similarity=0.117 Sum_probs=182.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCC
Q 014594 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 203 (422)
.++.+.+++..|.+...+.. +|+.++-...+.++. ...++|+++.-.|+.....+...|.+++.++.+.++
T Consensus 533 ~elq~~l~eltGmd~~Sl~p-~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G 611 (939)
T TIGR00461 533 AQLEKWLCSITGFDAISLQP-NSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDG 611 (939)
T ss_pred HHHHHHHHHHHCCCCcccCC-chHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCC
Confidence 47888888889987433333 344433332222221 123578899989966666688899999999987778
Q ss_pred CCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEE
Q 014594 204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 204 ~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~ 278 (422)
.+|+++|++.+++ .++++|++++|+| +|.+-+ .+++.++++. |.++++|.++.- ... .......+-++++
T Consensus 612 ~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~----l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 612 NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG----LTSPGDLGADVCH 686 (939)
T ss_pred CcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC----CCCccccCCCEEE
Confidence 9999999999974 4899999999999 899887 9999999987 899999999853 221 1112345667899
Q ss_pred ccChhhhc----cccccceeeecCHHHHHHHHHh-----------cCC-------CCCcHHHHHHHHHHccC--ChHHH-
Q 014594 279 RTFSKRAG----LAGLRVGYGAFPLSIIEYLWRA-----------KQP-------YNVSVAAEVAACAALQN--PIYLE- 333 (422)
Q Consensus 279 ~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~~-----------~~~-------~~~~~~~~~aa~~~L~~--~~~~~- 333 (422)
.|..|.|+ ..|-.+|++.+.+++...+... .+. ..-+......+..++.. .+.+.
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 99999654 3444579999887655544310 000 11112222333333332 23344
Q ss_pred HHHHHHHHHHHHHHHHccCCCCcccCC-CceE---EEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCC--eEE
Q 014594 334 VKEALIKERERLFKLLKDVPFLNPYPS-YSNF---ILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKG--YVR 402 (422)
Q Consensus 334 ~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f---~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~--~iR 402 (422)
..+....+..++.+.|++. ....++. .+.+ +.+++++ +.+..++.++|.++|+..-... +...+ .||
T Consensus 767 ~a~~ailnAnYl~~rL~~~-~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~-~pv~g~lmie 844 (939)
T TIGR00461 767 ASVVAILNANYMATRLKDH-YPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLS-FPVPGTLMVE 844 (939)
T ss_pred HHHHHHHHHHHHHHHhhcc-CcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccC-CccCCeEEEE
Confidence 6666777888999999873 2223332 2221 3345542 4678999999999998754432 22333 455
Q ss_pred EEec-ChhhHHHHHHHHhhh
Q 014594 403 VSVG-KPEHTDALMECLMHL 421 (422)
Q Consensus 403 is~~-~~~~~~~l~~al~~l 421 (422)
.+-. +.+++|++.+++..|
T Consensus 845 pTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 845 PTESESLEELDRFCDAMIAI 864 (939)
T ss_pred eeccCCHHHHHHHHHHHHHH
Confidence 5544 355677788877654
No 347
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.55 E-value=7e-12 Score=133.70 Aligned_cols=319 Identities=13% Similarity=0.057 Sum_probs=194.5
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCC-CC---cc----hHHHHHHHHHHcCCCCCCEEEeC-CHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF--PYIY-PD---PE----SRRLRAALAKDSGLESDHILVGC-GADELIDLI 162 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y-~~---~~----~~~lr~~la~~~~~~~~~i~~~~-G~~~al~~~ 162 (422)
..+|.|++..+.+. |.+...+.. -.. .+-| |. .| ..++.+.+++++|.+ ++-+.. |++++....
T Consensus 499 ~~~i~lGsct~~~~--p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~ag 574 (954)
T PRK05367 499 RSMIPLGSCTMKLN--AAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAG 574 (954)
T ss_pred cceeeCCcCCCcCC--HHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHH
Confidence 34677887666554 333333332 222 1334 31 12 246778888888975 455544 454444332
Q ss_pred HHHh----cCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccC
Q 014594 163 MRCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDG 232 (422)
Q Consensus 163 ~~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG 232 (422)
+.++ .++|| +|+++...|......+...|.+++.++.+.+..+|+++|++++.+. ++.+|++++|++-.+
T Consensus 575 L~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~ 654 (954)
T PRK05367 575 LLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGV 654 (954)
T ss_pred HHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCee
Confidence 3222 35565 5999999998777778889999999998777799999999999643 577888889988644
Q ss_pred cCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHHH
Q 014594 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~ 307 (422)
...+.+++.++++. |+++++|.++......-. .....+-++++.+.+|.|+ .+|-.+|++.+...+...+..
T Consensus 655 ~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg 731 (954)
T PRK05367 655 FEETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPG 731 (954)
T ss_pred ecCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCC
Confidence 45789999999987 999999999963211111 1123445688889999864 233347788877655544322
Q ss_pred hc-----C---CCCC--cHH----HHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce---EEEE
Q 014594 308 AK-----Q---PYNV--SVA----AEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN---FILC 367 (422)
Q Consensus 308 ~~-----~---~~~~--~~~----~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~---f~~~ 367 (422)
.. . ...+ +.. ....+...+.. .+.+. ..+....+.+++.+.|++.-.+......+. =..+
T Consensus 732 ~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~ 811 (954)
T PRK05367 732 HPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECIL 811 (954)
T ss_pred CccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEE
Confidence 11 0 0111 122 11112222322 23333 555555788899998876311111111111 1222
Q ss_pred E---eCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 368 E---VTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 368 ~---~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+ ++. +.+.+++.++|.++|+.....+ +...+.+||++. +.+++|+|.++++.|
T Consensus 812 ~~~~~~~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i 872 (954)
T PRK05367 812 DLRPLKESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAI 872 (954)
T ss_pred EeecccccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence 2 332 4578899999999999887633 334788999976 456677777777654
No 348
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.54 E-value=1.4e-12 Score=120.68 Aligned_cols=322 Identities=16% Similarity=0.132 Sum_probs=212.1
Q ss_pred CCCCCCeEEcCCCCCC---CCCCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENP---YGPPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~---~~~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+..++.++|+-.|... -..+|++.+++.+ +. + ...|-.+...++.++|++.+.-+-+.++++|+++||.+++
T Consensus 46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela 125 (442)
T KOG1404|consen 46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA 125 (442)
T ss_pred cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence 4456677777766432 2568999988876 21 1 2456666678999999999976667899999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCCCC----------------CCCC---------HHHHHHHh
Q 014594 163 MRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRKSD----------------FSLN---------VELIADAV 214 (422)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~----------------~~~d---------~~~l~~~i 214 (422)
++... ...-.++....+|++....+ -..|......+.+.. |+-+ .++++..+
T Consensus 126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 88531 12235777777776443332 223332222211000 1111 24444444
Q ss_pred hc---CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594 215 ER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 215 ~~---~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
.. ..+.+++....+...|.+-.+ +...++++. |.+.|.||++..|...+ .+..++.++.+--+-|++|.+|
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG 284 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG 284 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence 32 346677777877777777654 455666666 99999999999998776 4444556666666789999998
Q ss_pred cccccceeeecCHHHHHHHHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccC
Q 014594 287 LAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYP 359 (422)
Q Consensus 287 ~~G~r~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p 359 (422)
.|..+|.++..+++.+-+.+... .|+.++++.+++.++|+--+...++++..+...+|.+.|.++ +.+--.+
T Consensus 285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVR 363 (442)
T KOG1404|consen 285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVR 363 (442)
T ss_pred -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecc
Confidence 88999999999999999987763 367788888888888864322226666777777777777654 3232346
Q ss_pred CCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594 360 SYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 416 (422)
Q Consensus 360 ~~~~f~~~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 416 (422)
..|.++-+++-+.. ....+.+.+++.|+.|--+.-. .+.+||+.. +.++.|-+.+
T Consensus 364 G~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~--G~vfriaPPlciT~edi~f~~~ 430 (442)
T KOG1404|consen 364 GRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIH--GNVFRIAPPLCITKEDIDFAVE 430 (442)
T ss_pred cceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeeccccc--ceEEEecCCeeccHHHHHHHHH
Confidence 67888877764211 1335668889999999544322 359999964 4444444443
No 349
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.53 E-value=1.2e-11 Score=126.84 Aligned_cols=168 Identities=14% Similarity=0.202 Sum_probs=123.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-HHHcCCEEEEecCC-CCC-
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF- 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~- 203 (422)
|..-..+-++..|+.||.+ ...+++||+|.++.+++.+++.+||.|++...+|-+.... ..+.|++++++..+ +.+
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFG 250 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence 3334678899999999964 5789999999999999999999999999999999877764 67899999998732 222
Q ss_pred ---CCCH-----HHHHHHhhcC--------C-CeEEEEeCCCCccCcCCCHHHHHHHH-cCCCeEEEccCCcccc-CCCc
Q 014594 204 ---SLNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFS-GLES 264 (422)
Q Consensus 204 ---~~d~-----~~l~~~i~~~--------~-~~~i~l~~p~NPtG~~~~~e~l~~i~-~~~~~li~Deay~~~~-~~~~ 264 (422)
++++ +.+++++.+. + .|++++++|+- .|.+++.+++.+++ +..-.|++||||..+. +.+.
T Consensus 251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~~llvDEAhgah~~F~p~ 329 (720)
T PRK13578 251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPM 329 (720)
T ss_pred CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCCcEEEeCcchhhhccCcc
Confidence 3454 4488888643 1 58899998876 99999999999984 5533999999997643 3221
Q ss_pred ---hh-hhh---hcCCcEEEEccChhhhccccccce-eeecC
Q 014594 265 ---RM-EWV---KKHDNLIVLRTFSKRAGLAGLRVG-YGAFP 298 (422)
Q Consensus 265 ---~~-~~~---~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~ 298 (422)
.. ..+ .+.+.++++.|.+|.+ +++--+ ++..+
T Consensus 330 ~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 330 MADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred cccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 11 111 1234468999999975 565544 44443
No 350
>PLN02880 tyrosine decarboxylase
Probab=99.53 E-value=5.3e-12 Score=126.72 Aligned_cols=288 Identities=14% Similarity=0.099 Sum_probs=176.2
Q ss_pred HHHHHHHHHHcCCCCC-------CEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCchhHHHHHHHcCCE
Q 014594 132 RRLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA 193 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~-------~i~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~~ 193 (422)
.++.+++++++|.+.+ .-++|+|+++++-.++.+-.+ +.-.|++++-+|......+...|..
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg 204 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIH 204 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCC
Confidence 3466666677787643 367889989887665543211 1124567888899999999999984
Q ss_pred ---EEEecCC--CCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC
Q 014594 194 ---VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL 262 (422)
Q Consensus 194 ---~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~ 262 (422)
++.||.+ .++.+|++.|++++.+. .+-+|+.+-....||.+-|.++|.++|+. |+|+++|.+|..+...
T Consensus 205 ~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~ 284 (490)
T PLN02880 205 PENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACI 284 (490)
T ss_pred HHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHh
Confidence 7778864 36789999999999642 24456666778899999999999999998 9999999999976421
Q ss_pred -Cchhhhhhc-CCcEEEEccChhhhccccccceeeecCH--HHHHHHHHh----cC-------C-----CCC---c---H
Q 014594 263 -ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWRA----KQ-------P-----YNV---S---V 316 (422)
Q Consensus 263 -~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~~~----~~-------~-----~~~---~---~ 316 (422)
+.....+.. ..-+-+..+++|.+ .....+|+++++. .+.+.+... .. . |++ . .
T Consensus 285 ~~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~a 363 (490)
T PLN02880 285 CPEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRS 363 (490)
T ss_pred CHHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccH
Confidence 111111211 22346677899954 5777889888753 222222110 00 0 111 0 1
Q ss_pred HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCH-------HHHHHHHHhCCc
Q 014594 317 AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDA-------KKLKDDLAKMGV 387 (422)
Q Consensus 317 ~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~-------~~~~~~L~~~gI 387 (422)
+...+....+..+.+.+..++..+..+++.+.|++.+... +.|...+.+.+++++ ..+. .++.+.|.+.|-
T Consensus 364 lklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~ 443 (490)
T PLN02880 364 LKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGK 443 (490)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCC
Confidence 1111122222222222255555688999999998876555 345566677777753 2221 345566664454
Q ss_pred EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594 388 MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 420 (422)
Q Consensus 388 ~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 420 (422)
.........+..++|+++.. .++++.+.+.+++
T Consensus 444 ~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 444 IFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred EEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 43332322335799999753 3455555555543
No 351
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.52 E-value=2.8e-11 Score=123.95 Aligned_cols=285 Identities=12% Similarity=0.095 Sum_probs=176.0
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~-- 203 (422)
|..-..+-++..|+.||.+ ...+++||++.++.+++.+++.+||.|++...+|-+......+.|+++++++.. +.+
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi 271 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI 271 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence 3334678889999999964 578999999999999999999999999999999988877888899999998733 222
Q ss_pred --CCCH-----HHHHHHhhcC----CCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeE-EEccCCcccc-CCC-----ch
Q 014594 204 --SLNV-----ELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SR 265 (422)
Q Consensus 204 --~~d~-----~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~l-i~Deay~~~~-~~~-----~~ 265 (422)
++++ +.+++++.+. +++++++++| +-.|.+++.+++.+++ |+.+ ++||||..+. +.+ +.
T Consensus 272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sa 348 (713)
T PRK15399 272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSG 348 (713)
T ss_pred cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcCh
Confidence 3445 8899888642 3368888888 5599999999998888 5655 6999998643 222 11
Q ss_pred hhhh-hcCCcEEEEccChhhhccccccce-eeecCH----HHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHH
Q 014594 266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL----SIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKE 336 (422)
Q Consensus 266 ~~~~-~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~----~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~ 336 (422)
+... .....++++.|.+|.+ +++.-+ ++..+. +-++......+..+++-+ +...+.+.++.....+..+
T Consensus 349 m~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~ 426 (713)
T PRK15399 349 MSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLIN 426 (713)
T ss_pred hhCCCCCCeeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 1111 1122345589999975 566544 444422 222222223333334333 2333334444222112333
Q ss_pred HHHHHHHHHHHHHccCC-----C-CcccC--------------C----------------CceEEEEEeC----------
Q 014594 337 ALIKERERLFKLLKDVP-----F-LNPYP--------------S----------------YSNFILCEVT---------- 370 (422)
Q Consensus 337 ~~~~~~~~l~~~L~~~~-----~-~~~~p--------------~----------------~~~f~~~~~~---------- 370 (422)
...+....+++.+.+++ | +.+.. . +-.=+.+..|
T Consensus 427 ~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~ 506 (713)
T PRK15399 427 RSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSE 506 (713)
T ss_pred HHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCccccccccc
Confidence 33344444444443322 1 11111 0 0011334443
Q ss_pred CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeE--EEEec-ChhhHHHHHHHHhhh
Q 014594 371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYV--RVSVG-KPEHTDALMECLMHL 421 (422)
Q Consensus 371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~i--Ris~~-~~~~~~~l~~al~~l 421 (422)
.|..+..+.+.|.++||.+--.+. ..+ =++++ +.++.++|..+|.++
T Consensus 507 ~Gi~g~~l~~~L~e~gI~~E~~d~----~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 507 EGIPAALVAKFLDERGIVVEKTGP----YNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred CCCCHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 156788899999999999986652 223 23343 445567787777654
No 352
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.52 E-value=8e-12 Score=120.62 Aligned_cols=316 Identities=16% Similarity=0.155 Sum_probs=199.4
Q ss_pred CCCCeEEcCCC---CCCCCCCHHHHHHHhc----CCCCCCC--CCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHH
Q 014594 93 KPEDIVKIDAN---ENPYGPPPEVREALGQ----LKFPYIY--PDPESRRLRAALAKDSG-LESDHILVGCGADELIDLI 162 (422)
Q Consensus 93 ~~~~~i~l~~~---~~~~~~~~~v~~al~~----~~~~~~y--~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~~~ 162 (422)
+++.++|--++ .|--...|++.+|+.+ +.+.+.+ ......+|-++|++..+ -+-++|++++|++++++.+
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtA 121 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETA 121 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHH
Confidence 34556665444 1222346788888765 3332111 11126788888888887 4468999999999999999
Q ss_pred HHHhc-------CCC-CEEEEcCCCchhHHHHHHHcCC--------------EEEEecCCC--------CCC----CCHH
Q 014594 163 MRCVL-------DPG-DKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKS--------DFS----LNVE 208 (422)
Q Consensus 163 ~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~--------~~~----~d~~ 208 (422)
++... +|. .+++.-..+|++-...+...|. .+..++... ... -..+
T Consensus 122 lKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~ 201 (449)
T COG0161 122 LKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD 201 (449)
T ss_pred HHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHH
Confidence 98542 233 3488888888643332221111 122222111 011 2256
Q ss_pred HHHHHhhc---CCCeEEEEeCCCCc-cCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEE
Q 014594 209 LIADAVER---EKPKCIFLTSPNNP-DGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIV 277 (422)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NP-tG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~ 277 (422)
+|++.+.+ ++..++++.....- .|..++. +++++||+. |+++|.||+-..|...+..... .+-.++++
T Consensus 202 ~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~- 280 (449)
T COG0161 202 ELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL- 280 (449)
T ss_pred HHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee-
Confidence 77887765 45678887755554 8888775 567778887 9999999999999876654332 22233334
Q ss_pred EccChhhhccccccceeeecCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-~------~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~ 347 (422)
+++|.+...=+.+|.+++.+++.+.+..- . .+|+.++++.+++.+.|+ ++++++ +.++.-.++.+
T Consensus 281 --~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~---~~~~~~~~l~~ 355 (449)
T COG0161 281 --CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLE---RVAEIGAYLQA 355 (449)
T ss_pred --eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHH
Confidence 46798763337788888999999988764 1 247789999988887775 344444 44455555555
Q ss_pred HHcc----CCCCcccCCCceEEEEEeCCCCC---------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhH
Q 014594 348 LLKD----VPFLNPYPSYSNFILCEVTSGMD---------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHT 411 (422)
Q Consensus 348 ~L~~----~~~~~~~p~~~~f~~~~~~~~~~---------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~ 411 (422)
.|++ .+.+.-....|.+.-+++....+ ...+.+.+.++|+++||.. +.+=++. .+.+++
T Consensus 356 ~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-----~~i~~~PPliit~~ei 430 (449)
T COG0161 356 GLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-----DVIYLMPPLIITREEI 430 (449)
T ss_pred HHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-----CEEEEcCCccCCHHHH
Confidence 5544 34444456677777788754333 5577788889999999985 3444443 256666
Q ss_pred HHHHHHHh
Q 014594 412 DALMECLM 419 (422)
Q Consensus 412 ~~l~~al~ 419 (422)
+++.+++.
T Consensus 431 d~l~~~l~ 438 (449)
T COG0161 431 DELVDALR 438 (449)
T ss_pred HHHHHHHH
Confidence 76666654
No 353
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.52 E-value=1e-11 Score=129.64 Aligned_cols=321 Identities=12% Similarity=0.077 Sum_probs=194.3
Q ss_pred CeEEcCCCCCCCCCCHHHHHH-HhcCCCCCCC-C---Ccch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 96 DIVKIDANENPYGPPPEVREA-LGQLKFPYIY-P---DPES----RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~a-l~~~~~~~~y-~---~~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
.++.|++..+-+++-....-+ ..++...+-| | ..|+ .++++.+++..|.+.-.+...+|++ +-...+.++
T Consensus 501 ~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~-gE~A~Lmai 579 (954)
T PRK12566 501 SMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQ-GEYAGLLAI 579 (954)
T ss_pred CcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHH-HHHHHHHHH
Confidence 357777765555543332222 1222222455 4 2243 4788888888897654444434443 332333322
Q ss_pred ----cCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC
Q 014594 167 ----LDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 167 ----~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~ 236 (422)
+.+ .++|+++.-.|+.....+...|.+++.++.+++..+|+++|++.+++ .++.+|++++|++-.+...+
T Consensus 580 r~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~ 659 (954)
T PRK12566 580 RRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG 659 (954)
T ss_pred HHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecch
Confidence 222 25788888888544555777899999999876779999999999863 56778888899886666666
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc----ccccceeeecCHHHHHHHHHhc--
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYLWRAK-- 309 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~r~G~i~~~~~~~~~l~~~~-- 309 (422)
.+++.++++. |+++++|.++.--. ..+......+.+++++++.|.|+. .|.-+|.+.+.+++...+....
T Consensus 660 V~eI~~iah~~Galv~vDgA~~~a~---~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~ 736 (954)
T PRK12566 660 IREICEVVHQHGGQVYMDGANLNAQ---VGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVV 736 (954)
T ss_pred HHHHHHHHHHcCCEEEEEeeChhhc---cCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCc
Confidence 8888888886 99999999986211 111212345667999999997752 2444666666665554444221
Q ss_pred -------CCC------CCcHHHHHHHHHHccCChH-HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE---EEEE---
Q 014594 310 -------QPY------NVSVAAEVAACAALQNPIY-LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCE--- 368 (422)
Q Consensus 310 -------~~~------~~~~~~~~aa~~~L~~~~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f---~~~~--- 368 (422)
... ..+.....++...+..-++ +. ..+....+..++.+.|.+.-.+...+..+.| ..++
T Consensus 737 d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~ 816 (954)
T PRK12566 737 PVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRP 816 (954)
T ss_pred CCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccc
Confidence 001 1122223334444433111 33 4444567888888888763222222222331 1123
Q ss_pred eC--CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 369 VT--SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 369 ~~--~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
++ .+.+.+++.++|.++||..-.. .+...+++||+.. +.+++|+|.++++.+
T Consensus 817 l~~~~g~~~~dvakRL~d~Gihapt~-~fPv~~~LmIepTE~eskeEIDrf~eAL~~I 873 (954)
T PRK12566 817 LKAQTGISEEDVAKRLMDYGFHAPTM-SFPVPGTLMVEPTESESKAELDRFVEAMLSI 873 (954)
T ss_pred cccccCCCHHHHHHHHHHCCcEEeEE-eeccCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 33 2467788999999999987553 3334789999975 567788888888765
No 354
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.51 E-value=9.8e-12 Score=123.64 Aligned_cols=315 Identities=14% Similarity=0.111 Sum_probs=181.0
Q ss_pred CCCCeEEcCCCC--CCC-CCCHHHHH--HHhc-C---C--CC--CCCCCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANE--NPY-GPPPEVRE--ALGQ-L---K--FP--YIYPDPESRRLRAALAKDS-GLESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~-~~~~~v~~--al~~-~---~--~~--~~y~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~a 158 (422)
+++.++|+..+. ..+ ..+|++.+ ++.+ + . .. ..|..+...++-++|++.. .-..+.+++++++++|
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA 122 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA 122 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence 577889987763 333 35678887 7764 2 1 11 1233444556777777766 2234699999999999
Q ss_pred HHHHHHHhc--------CCC------CEEEEcCCCchhHHHHHHH-cCCEE-----------EEecCCC------CCC--
Q 014594 159 IDLIMRCVL--------DPG------DKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS------DFS-- 204 (422)
Q Consensus 159 l~~~~~~l~--------~~g------d~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~v~~~~------~~~-- 204 (422)
++.+++... ..| .+|+....+|++....+.. .|... ..++... +..
T Consensus 123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK08297 123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE 202 (443)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence 999999541 012 5799999999866544433 22110 0011000 000
Q ss_pred -------CCHHHHHHHhhc--CCCeEEEEeCCCCccCcC-CCHHHHHH---HHcC-CCeEEEccCCccccCCCchh--hh
Q 014594 205 -------LNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW 268 (422)
Q Consensus 205 -------~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~ 268 (422)
-+++.+++.+.+ +++.+|++.......|.+ .|.+.+++ +|+. |+++|.||++..|...+... ..
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~ 282 (443)
T PRK08297 203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ 282 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence 023555666642 567888888666666765 34444444 4554 99999999999886543221 12
Q ss_pred hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH-------HhcCCCCCcHHHHHHHHHHccC---ChHHH-HHHH
Q 014594 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-------RAKQPYNVSVAAEVAACAALQN---PIYLE-VKEA 337 (422)
Q Consensus 269 ~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~-------~~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~ 337 (422)
.+..+.++ +|+|.++ +|.+++..++.+... ....+|+.++++..++.+.|+- ++..+ ..+.
T Consensus 283 ~gv~PDiv---~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~ 354 (443)
T PRK08297 283 LGVRPDIV---AFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ 354 (443)
T ss_pred cCCCCCEE---Eeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 22233333 4689864 233444444322211 1224467888888888888762 33333 3333
Q ss_pred HHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594 338 LIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA 413 (422)
Q Consensus 338 ~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~ 413 (422)
-+..++.|.+..++.+.+. .....|.++.+++++......+.+.|.++||++.+.. .+.+||+.+ +.++.++
T Consensus 355 g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~ 430 (443)
T PRK08297 355 GEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG----ERSIRFRPALTVTTEEIDA 430 (443)
T ss_pred HHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC----CCeEEEECCccCCHHHHHH
Confidence 3333333433333344332 2345678888888643335678888889999998754 367899755 3344444
Q ss_pred HHHHHh
Q 014594 414 LMECLM 419 (422)
Q Consensus 414 l~~al~ 419 (422)
+.++++
T Consensus 431 ~l~~l~ 436 (443)
T PRK08297 431 AIDALR 436 (443)
T ss_pred HHHHHH
Confidence 444443
No 355
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.50 E-value=3.7e-11 Score=123.11 Aligned_cols=285 Identities=11% Similarity=0.105 Sum_probs=179.0
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~-- 203 (422)
|..-..+.++..|+.||.+ ...+++||++.++.+++.+++.+||.|++...+|-+......+.|+++++++.. +.+
T Consensus 193 ~~G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 3334678899999999964 578999999999999999999999999999999988877888899999998733 222
Q ss_pred --CCC-----HHHHHHHhhc-CCCe---EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC-----ch
Q 014594 204 --SLN-----VELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-----SR 265 (422)
Q Consensus 204 --~~d-----~~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~-----~~ 265 (422)
+++ .+.+++.+.+ ++.+ .+++++| +-.|.+++.+++.+++.. + +++||||..+. +.+ +.
T Consensus 272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sa 348 (714)
T PRK15400 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG 348 (714)
T ss_pred ccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcCh
Confidence 234 8999999864 2333 7888888 559999999999999976 5 78999998643 222 12
Q ss_pred hhhh-hcCCcEEEEccChhhhcccccccee-eec----CHHHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHH
Q 014594 266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVGY-GAF----PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKE 336 (422)
Q Consensus 266 ~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~-i~~----~~~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~ 336 (422)
+... ...+.++++.|.+|.+ +|+.-+. +.. +.+-++......+..+++-+ +...+.+.++.....+..+
T Consensus 349 m~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~ 426 (714)
T PRK15400 349 MSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLIN 426 (714)
T ss_pred hhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 2111 1124468999999975 5554442 222 22222233233333334333 2333334444322222334
Q ss_pred HHHHHHHHHHHHHccCCC------CcccC-C-----------------------------CceEEEEEeCC---------
Q 014594 337 ALIKERERLFKLLKDVPF------LNPYP-S-----------------------------YSNFILCEVTS--------- 371 (422)
Q Consensus 337 ~~~~~~~~l~~~L~~~~~------~~~~p-~-----------------------------~~~f~~~~~~~--------- 371 (422)
...+....+++.|.+++. +.+.. + +-.=+.+..|.
T Consensus 427 ~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~ 506 (714)
T PRK15400 427 GSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSD 506 (714)
T ss_pred HHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccc
Confidence 444445555555544432 21111 1 00013344432
Q ss_pred -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE--EEec-ChhhHHHHHHHHhhh
Q 014594 372 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVR--VSVG-KPEHTDALMECLMHL 421 (422)
Q Consensus 372 -~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR--is~~-~~~~~~~l~~al~~l 421 (422)
|..+..+.+.|.++||.+--.+. ..+= ++++ +.++.++|.++|.++
T Consensus 507 ~Gipg~~v~~~L~e~gI~~E~~d~----~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 507 FGIPASIVAKYLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred cCCCHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45677888999999999986652 3333 3343 345567788877654
No 356
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.49 E-value=7.9e-12 Score=124.09 Aligned_cols=316 Identities=13% Similarity=0.137 Sum_probs=178.3
Q ss_pred CCCCeEEcCCCC--CCC-CCCHHHH--HHHhc-CCCC----C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANE--NPY-GPPPEVR--EALGQ-LKFP----Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~-~~~~~v~--~al~~-~~~~----~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~a 158 (422)
+++.+||+..+. ..+ ..+|.+. +++.+ +... . .+......++-+.|++... -..+.+++++++++|
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 677888887763 223 3467887 67655 2211 1 1222223455555666542 234689999999999
Q ss_pred HHHHHHHhcC--------C------CCEEEEcCCCchhHHHHHHH-cCCE-EE----------E--ec-----CC-CCCC
Q 014594 159 IDLIMRCVLD--------P------GDKIVDCPPTFTMYEFDAAV-NGAA-VV----------K--VP-----RK-SDFS 204 (422)
Q Consensus 159 l~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~-~g~~-~~----------~--v~-----~~-~~~~ 204 (422)
++.+++.-.. . +.+|+....+|++....+.. .|.. .. . .| .+ +...
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 9999995420 1 36799999999765544332 2211 00 0 11 00 0000
Q ss_pred -------CCHHHHHHHhh--cCCCeEEEEeCCCCccCcCC-CHHHH---HHHHcC-CCeEEEccCCccccCCCchh--hh
Q 014594 205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EW 268 (422)
Q Consensus 205 -------~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~-~~e~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~ 268 (422)
-+++.+++.+. .+++.++++.......|.+. +.+.+ .++|+. |+++|+||++..|...+... ..
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~ 275 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ 275 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence 12445555553 25788999887777778765 44444 445554 99999999999876543221 12
Q ss_pred hhcCCcEEEEccChhhhccccccceeeecCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHH
Q 014594 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQN---PIYLE-VKEAL 338 (422)
Q Consensus 269 ~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~----~~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~ 338 (422)
.+-.++++ +++|.+ +. .|++.... ++..... .....|+.++++.+++.+.|+. .+..+ ..+.-
T Consensus 276 ~gv~PDi~---~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g 348 (431)
T TIGR03251 276 LGVQPDIV---AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG 348 (431)
T ss_pred cCCCCCEE---EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 22233333 368875 22 35554432 2222111 1223467788888888887763 23333 44444
Q ss_pred HHHHHHHHHHHccCC-CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHH
Q 014594 339 IKERERLFKLLKDVP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDAL 414 (422)
Q Consensus 339 ~~~~~~l~~~L~~~~-~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l 414 (422)
+..++.|.+..++.+ .+.-....|.++.+++++......+.+.|.++||.+.+.. .+.+||++.. .++++++
T Consensus 349 ~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~ 424 (431)
T TIGR03251 349 AHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAA 424 (431)
T ss_pred HHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC----CCeEEEECCccCCHHHHHHH
Confidence 444444444333344 3222345577888888643345578888999999997754 3679998763 3444555
Q ss_pred HHHHh
Q 014594 415 MECLM 419 (422)
Q Consensus 415 ~~al~ 419 (422)
.++++
T Consensus 425 l~~l~ 429 (431)
T TIGR03251 425 IDAIR 429 (431)
T ss_pred HHHHH
Confidence 54444
No 357
>PLN02590 probable tyrosine decarboxylase
Probab=99.48 E-value=1.8e-11 Score=123.12 Aligned_cols=287 Identities=13% Similarity=0.094 Sum_probs=176.5
Q ss_pred HHHHHHHHHcCCCC-------CCEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCchhHHHHHHHcCC--
Q 014594 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA-- 192 (422)
Q Consensus 133 ~lr~~la~~~~~~~-------~~i~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~-- 192 (422)
.+.+++++++|.+. ..-++++|+++++-.++.+-.+ +.-.|++++.+|......+...|.
T Consensus 174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~ 253 (539)
T PLN02590 174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE 253 (539)
T ss_pred HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence 45556666678764 2357788999887665543211 112455678889999999999888
Q ss_pred -EEEEecCC--CCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-
Q 014594 193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL- 262 (422)
Q Consensus 193 -~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~- 262 (422)
+++.||.+ .++.+|++.|+++|.+. .|-+|+.+-....||.+-|.++|.+||+. |+|+.+|.+|..+..-
T Consensus 254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~ 333 (539)
T PLN02590 254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC 333 (539)
T ss_pred ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence 57888865 46789999999999642 24456666778899999999999999997 9999999999976521
Q ss_pred Cchhhhhhc-CCcEEEEccChhhhccccccceeeecCH--HHHHHHHH------hcC----------CCC--Cc----HH
Q 014594 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWR------AKQ----------PYN--VS----VA 317 (422)
Q Consensus 263 ~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~~------~~~----------~~~--~~----~~ 317 (422)
+.....+.. ....=+...++|. +.....+|.++++. .+.+.+.. ... .|+ .+ .+
T Consensus 334 ~~~r~~~~Gie~ADSit~D~HK~-l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raL 412 (539)
T PLN02590 334 PEYRKFIDGIENADSFNMNAHKW-LFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSL 412 (539)
T ss_pred hhhHHHhcCCccCCEEEECchhh-cCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHH
Confidence 111111111 1122345578995 44677888888753 22222210 000 011 11 12
Q ss_pred HHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCC-------HHHHHHHHHhCCcE
Q 014594 318 AEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMD-------AKKLKDDLAKMGVM 388 (422)
Q Consensus 318 ~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~-------~~~~~~~L~~~gI~ 388 (422)
-..++...+....+.++.++..+..+++.+.|++.+.+.+ .+..-+.+.+++.+ +.+ ..++.+.|.+.|..
T Consensus 413 klW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~ 492 (539)
T PLN02590 413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKI 492 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 2233333333334444778888999999999998875553 44455556666542 222 13566666666765
Q ss_pred EEeCCCCCCCCeEEEEecCh-hhHHHHHHHHhh
Q 014594 389 IRHYNNKELKGYVRVSVGKP-EHTDALMECLMH 420 (422)
Q Consensus 389 v~~~~~~~~~~~iRis~~~~-~~~~~l~~al~~ 420 (422)
......-.+.-++|++++.+ .+.+++..+++.
T Consensus 493 ~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~ 525 (539)
T PLN02590 493 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQI 525 (539)
T ss_pred EEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence 55443323346999998632 223444444443
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.48 E-value=2.7e-11 Score=129.28 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=191.5
Q ss_pred cCCCCCCCCCCHHHHHHHhc-CCCCCCC-CC-----cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 014594 100 IDANENPYGPPPEVREALGQ-LKFPYIY-PD-----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L 167 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~-----~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~ 167 (422)
++.|.-+.-.|+.+.+.+.+ -..-..| |. .| ..++++.++++.|.+..++-+..+++.+.+.++.++ .
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~ 160 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV 160 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh
Confidence 44454444455656555544 2211233 32 12 237889999999999999999999999999888876 3
Q ss_pred CCC--CEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 168 DPG--DKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 168 ~~g--d~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
.++ |+|++++..|+.... .++..|++++.++.+.+ ++ . .++.++++.+| |-+|.+.+.+++.
T Consensus 161 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~-~~~~~vlvq~p-~~~G~i~d~~~i~ 228 (954)
T PRK05367 161 SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------H-DDVFGVLLQYP-GTSGEVRDYTALI 228 (954)
T ss_pred ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------c-ccEEEEEEecC-CCCeeeccHHHHH
Confidence 443 899999999986554 34668999999986432 11 1 34555655566 5599999999999
Q ss_pred HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh-----hccccccceeeecCHHHHHHHHHhc------
Q 014594 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-----AGLAGLRVGYGAFPLSIIEYLWRAK------ 309 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~-----~~~~G~r~G~i~~~~~~~~~l~~~~------ 309 (422)
++++. |+++++|.....+.... .....+-++++++..|. ||.| ..|++.+++++.+.+.-..
T Consensus 229 ~~ah~~Gal~~vda~~~Al~~l~----~pge~GaDi~vgs~qkfg~P~g~GGP--~aGflavr~~~~r~lpgrivG~s~d 302 (954)
T PRK05367 229 AAAHARGALVAVAADLLALTLLT----PPGEMGADIAVGSAQRFGVPMGFGGP--HAAYFAVRDAYKRSMPGRIVGVSVD 302 (954)
T ss_pred HHHHHcCCEEEEEehhhhccCCC----ChhhcCCCEEEeeCcccCCCCCCCCC--CEEEEEECHHHHhhCCCCeeeeecc
Confidence 99987 99999997553332211 13355667999999984 4434 4899999988877653100
Q ss_pred ----C----------------CCCCcHH---HHHHHHH----HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594 310 ----Q----------------PYNVSVA---AEVAACA----ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY 361 (422)
Q Consensus 310 ----~----------------~~~~~~~---~~~aa~~----~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 361 (422)
. ..+.|.. +..++.+ .+..+..++ +.++...+..++.+.|+..++....+..
T Consensus 303 ~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~ 382 (954)
T PRK05367 303 AAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSF 382 (954)
T ss_pred cCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 0 0011111 1111111 112234455 7888899999999999876533222221
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
..-+.++++ .++.++.++|+++||.++... ++.+|||+. +.++++.|.+++.
T Consensus 383 f~~~~~~~~--~~~~~i~~~l~~~gi~~~~~~----~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 383 FDTLTVEVG--GDAAAVLARALAAGINLRRVD----DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CCeEEEeCC--CCHHHHHHHHHHCCceecccc----CCEEEEEecccCCHHHHHHHHHHHc
Confidence 122345553 478999999999999996543 468999986 4556666666664
No 359
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.45 E-value=1.6e-11 Score=121.86 Aligned_cols=309 Identities=14% Similarity=0.105 Sum_probs=170.6
Q ss_pred CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+++.+||+..+. ..+ ..+|++.+++.+ +.....+..+ ...++.+.|++.+.. .+.+++++++++|++.+++
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~Alk 122 (431)
T PRK06209 44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVR 122 (431)
T ss_pred eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHH
Confidence 45678899998774 233 357889888876 3322233222 233678888887742 3689999999999999999
Q ss_pred Hhc-CCC-CEEEEc-CCCchhHHHHHHHcCCEEE---------EecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594 165 CVL-DPG-DKIVDC-PPTFTMYEFDAAVNGAAVV---------KVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (422)
Q Consensus 165 ~l~-~~g-d~Vl~~-~p~y~~~~~~~~~~g~~~~---------~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP 230 (422)
.-. -.| .+|+.. .-.|+.+.... .|.... .... .-..-|++.+++.+.+ .++.+|++....
T Consensus 123 lAr~~tgr~~i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~aavi~Epv~-- 197 (431)
T PRK06209 123 LARAYTGRDLVARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTV-TFRYNDIASLEALFEDHPGRIACVILEPAT-- 197 (431)
T ss_pred HHHHHhCCCeEEEeccCccccccccc--cccCCCCCCCChhHhcccc-ccCCCCHHHHHHHHHhCCCCEEEEEEcccc--
Confidence 432 133 445554 23333211110 111100 0000 0012378999988853 346677765432
Q ss_pred cCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-
Q 014594 231 DGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY- 304 (422)
Q Consensus 231 tG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~- 304 (422)
|...+ .+++.++|+. |+++|+||++..|........ ..+..+. +.+++|.+| .|+.+|++++++++++.
T Consensus 198 -g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~~~~i~~~~ 272 (431)
T PRK06209 198 -ADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD---LSCFGKALG-NGFAVSALAGKREYMELG 272 (431)
T ss_pred -CCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc---eeeehhhhc-CCcccEEEEEHHHHHhhh
Confidence 33444 4566666766 999999999987653221111 1222222 356799998 68899999999998876
Q ss_pred -HHH--------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe--
Q 014594 305 -LWR--------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV-- 369 (422)
Q Consensus 305 -l~~--------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~-- 369 (422)
+.. ...+++.+++..+++.+.|+ +++..+ ..+.....++.|.+...+++........|..+.+.+
T Consensus 273 ~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~ 352 (431)
T PRK06209 273 GLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYST 352 (431)
T ss_pred cccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEec
Confidence 311 12235667777777777664 333333 434444444444443344553321222232222221
Q ss_pred -C-CCCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594 370 -T-SGMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 419 (422)
Q Consensus 370 -~-~~~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 419 (422)
. .+.+ ...+.+.|.++||.+.+ ++|+.. +.++++++.++++
T Consensus 353 ~~~~~~~~~~~~~~~~~~l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~ 400 (431)
T PRK06209 353 LDGNGQPSQAFRTLFLQETIRRGVLMPS---------LVVSYAHGDADIERTIDAVH 400 (431)
T ss_pred CCcccCCcHHHHHHHHHHHHHCCccccc---------ccccccCCHHHHHHHHHHHH
Confidence 1 1111 12566778899997622 455533 3455555555554
No 360
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.44 E-value=6.1e-11 Score=124.54 Aligned_cols=315 Identities=14% Similarity=0.179 Sum_probs=189.8
Q ss_pred CeEEcCCC--CCCCC--CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDAN--ENPYG--PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~-~~~~----y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~ 164 (422)
.++|+..+ ...++ ..|++.+|+.+ +. ..+. +..+...+|-++|.+..+-+ .+.|+++++|++|++.+++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence 57777665 23333 47999988876 32 2121 22223456667776643311 3589999999999999988
Q ss_pred HhcC---------------------CCCEEEEcCCCchhHHHHHHHcCC----------E-----EEEecCC--------
Q 014594 165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA----------A-----VVKVPRK-------- 200 (422)
Q Consensus 165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~----------~-----~~~v~~~-------- 200 (422)
.-.+ ...+|+....+|++-...+...+. . ...++..
T Consensus 446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~ 525 (817)
T PLN02974 446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR 525 (817)
T ss_pred HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence 4311 124699999999744333222111 0 0011100
Q ss_pred ------CC-----------CC-----CC------------HHHHHHHhhc-------CCCeEEEEeCC-CCccCcCCC-H
Q 014594 201 ------SD-----------FS-----LN------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN-D 237 (422)
Q Consensus 201 ------~~-----------~~-----~d------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~-~ 237 (422)
.+ |. +| .+.+++.+.+ .++.+|++... +.-.|.+.+ .
T Consensus 526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~ 605 (817)
T PLN02974 526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP 605 (817)
T ss_pred ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence 00 00 00 2456666642 45778888763 676788775 3
Q ss_pred H---HHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHH---
Q 014594 238 E---DLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--- 307 (422)
Q Consensus 238 e---~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--- 307 (422)
+ .++++|+. |+++|.||++..|...+... ...+-.++++ +++|.++ .| +.+|.+++++++.+.+..
T Consensus 606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~ 681 (817)
T PLN02974 606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA---CYAKLLT-GGLVPLAATLATEEVFEAFRGPSK 681 (817)
T ss_pred HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE---eeccccc-CCCCccEEEEEcHHHHHhhccccc
Confidence 3 34455555 99999999999987544322 2222233334 4679987 78 699999999999988752
Q ss_pred -----hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHH----HHHccCCCCcccCCCceEEEEEeCCCC-
Q 014594 308 -----AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLF----KLLKDVPFLNPYPSYSNFILCEVTSGM- 373 (422)
Q Consensus 308 -----~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~----~~L~~~~~~~~~p~~~~f~~~~~~~~~- 373 (422)
...+|+.++++.+++.+.|+ +++..+ +.+...+..+++. +.|.+++.+.-....|.++.+++.+..
T Consensus 682 ~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~ 761 (817)
T PLN02974 682 LDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGS 761 (817)
T ss_pred cCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCc
Confidence 22357889999988887775 333333 3344444444443 344555654444567778888875311
Q ss_pred -------CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 374 -------DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 374 -------~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
-+..+.+.+. ++||.+++.. +.||+... .+++.+++..++.
T Consensus 762 ~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~ 813 (817)
T PLN02974 762 GSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVY 813 (817)
T ss_pred ccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1346778888 9999999853 68888643 4555566655554
No 361
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.42 E-value=9.7e-11 Score=124.61 Aligned_cols=297 Identities=15% Similarity=0.142 Sum_probs=189.5
Q ss_pred CCCCCCCCCHHHHHHHhc-CCCC---CCC-CC--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCC
Q 014594 102 ANENPYGPPPEVREALGQ-LKFP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP 169 (422)
Q Consensus 102 ~~~~~~~~~~~v~~al~~-~~~~---~~y-~~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~ 169 (422)
.|.-+.-.|+.+.+++.+ ...- ..| |+ .| ..+++..++++.|.+++++.++.+++.+.+.++.++ .++
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhccc
Confidence 333334456777677765 2211 334 22 12 347899999999999999999999999999888766 454
Q ss_pred C--CEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 170 G--DKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 170 g--d~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
| |+|++++..|+.+.. .++..|++++.++.+. .+ ... ..+-.+++..|+ .+|.+.+.+++.++
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~---~~------~~~-~~v~~vlvq~P~-~~G~v~dv~~I~~~ 258 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD---FD------YSS-GDVCGVLVQYPA-TDGEVLDYAEFVKN 258 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh---hc------ccc-CceEEEEEecCC-CCeEEcCHHHHHHH
Confidence 4 789999999986544 3455799999988532 11 111 233344444554 49999999999999
Q ss_pred HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh---ccccccceeeecCHHHHHHHHH-h-c--------
Q 014594 244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYLWR-A-K-------- 309 (422)
Q Consensus 244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~---~~~G~r~G~i~~~~~~~~~l~~-~-~-------- 309 (422)
++. |+++++ .++..-. ..+......+.++++++..|.. |..|-+.|++.+++++.+.+.- . .
T Consensus 259 ah~~GaL~iV-aad~lal---~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~ 334 (993)
T PLN02414 259 AHANGVKVVM-ATDLLAL---TMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGK 334 (993)
T ss_pred HHHcCCEEEE-EECHHHh---cCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCC
Confidence 987 899888 4433211 1111133456678899988843 1234458999998887664420 0 0
Q ss_pred C----------------CCCCcHHHHHHHHHHc-------cCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEE
Q 014594 310 Q----------------PYNVSVAAEVAACAAL-------QNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFI 365 (422)
Q Consensus 310 ~----------------~~~~~~~~~~aa~~~L-------~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~ 365 (422)
. ..+.|.....++.+.+ ..+..++ +.+++.++..++.+.|++.|+....+....-+
T Consensus 335 ~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~v 414 (993)
T PLN02414 335 PALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTV 414 (993)
T ss_pred cccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeE
Confidence 0 0122221222222222 1223344 77889999999999998876332233222234
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.++++ +..++.++|.++||.++... .+.+|+|+. +.+|+|.|.+++..
T Consensus 415 t~~~~---~~~~v~~~L~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 415 KVKCS---DADAIADAAAKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred EEecC---CHHHHHHHHHHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 45554 56889999999999888654 467999975 56778888888754
No 362
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.42 E-value=8.8e-11 Score=118.27 Aligned_cols=270 Identities=12% Similarity=0.082 Sum_probs=170.0
Q ss_pred EEEeCCHHHHHHHHHHHh----cC----------------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEecC
Q 014594 149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR 199 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~ 199 (422)
-++|+|+++++-.++.+- +. ++..|+++.-.|......++..|. +++.+|.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 577889998887765532 11 124688888899999888888888 7899998
Q ss_pred CCCCCCCHHHHHHHhhc---CCCeEEEEe--CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-Cchhhhhhc-
Q 014594 200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKK- 271 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~---~~~~~i~l~--~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~- 271 (422)
++++.+|+++|++.+.+ .+++.++++ ..++.||.+-|.+++.++++. |+++++|.+|...... +.....+..
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl 321 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI 321 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence 88889999999998853 455656555 557799999999999999997 9999999999854311 111111111
Q ss_pred CCcEEEEccChhhhccccccceeeecC-HHHHHHHHHh----cC-------C--C--CCcH--HHHHHHHHHccCChHHH
Q 014594 272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA----KQ-------P--Y--NVSV--AAEVAACAALQNPIYLE 333 (422)
Q Consensus 272 ~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~----~~-------~--~--~~~~--~~~~aa~~~L~~~~~~~ 333 (422)
.....+..+.+|.++ ....+|.++.+ ++..+.+... .. . + +-+. +...++...+....+.+
T Consensus 322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ 400 (522)
T TIGR03799 322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYEL 400 (522)
T ss_pred hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHH
Confidence 233467778999443 34558888875 4555544321 00 0 1 1111 22334444444444434
Q ss_pred HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEe-CCCC---------------C--H----HHHHHHHHhCCcEEE
Q 014594 334 VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV-TSGM---------------D--A----KKLKDDLAKMGVMIR 390 (422)
Q Consensus 334 ~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~-~~~~---------------~--~----~~~~~~L~~~gI~v~ 390 (422)
+.++..+..+++.+.|++.+.+.+ .+..-+.+.+++ |.+. + . ..+.+.+.+.|....
T Consensus 401 ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~v 480 (522)
T TIGR03799 401 LIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFV 480 (522)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 888889999999999998866654 344444555554 3211 0 1 245556666776554
Q ss_pred eCCC-----C-C-CCCeEEEEecCh-hhHHHHHHHHh
Q 014594 391 HYNN-----K-E-LKGYVRVSVGKP-EHTDALMECLM 419 (422)
Q Consensus 391 ~~~~-----~-~-~~~~iRis~~~~-~~~~~l~~al~ 419 (422)
.... . + ..-.+|++++.+ .+.+.+...++
T Consensus 481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence 3221 1 1 124799998643 23355555554
No 363
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.41 E-value=3.4e-10 Score=111.73 Aligned_cols=286 Identities=19% Similarity=0.198 Sum_probs=186.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CC--
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SD-- 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~-- 202 (422)
|..-..+..+..|+.+|.+ ...+++||++.++..++.+++.+||.|+++.++|-+........|+.++++... ..
T Consensus 68 p~G~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 68 PEGPIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred CCccHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence 4444678999999999964 478899999999999999999999999999999988887778899999998732 21
Q ss_pred --CCCCHHHHHHHhhc-CCC-eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEE
Q 014594 203 --FSLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLI 276 (422)
Q Consensus 203 --~~~d~~~l~~~i~~-~~~-~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i 276 (422)
.+++.+.+.+++.+ +.. |+++++||.- .|.+++.+++.+.+.. ++|+.+||++......... .......+.++
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 36899999997753 344 7888888876 8999999999999876 9999999998754322211 11222367789
Q ss_pred EEccChhhhccccccce-eeecCH-------HHHHHHHHhcCCCCCcHHH---HHHHHHHccCC---hHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAGLRVG-YGAFPL-------SIIEYLWRAKQPYNVSVAA---EVAACAALQNP---IYLEVKEALIKER 342 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G-~i~~~~-------~~~~~l~~~~~~~~~~~~~---~~aa~~~L~~~---~~~~~~~~~~~~~ 342 (422)
++.|.+|.. +++.-+ ++..+. .+-+.+. ..+..+++-.. ..+|...+... .|.+..+..-+.|
T Consensus 226 ~tqS~HK~l--~alSQaS~iHv~~~~~~~~~r~nea~~-~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r 302 (557)
T COG1982 226 VTQSTHKLL--AALSQASMIHVKDGRAVNHERFNEALM-MHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFR 302 (557)
T ss_pred EEechhhhh--hhhhhhHHHhhCCCccCCHHHHHHHHH-HHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 999999975 455544 344432 2223332 22223333222 22222222221 1222355556667
Q ss_pred HHHHHHHccCCCCccc-CCC-----c----------eE------EEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594 343 ERLFKLLKDVPFLNPY-PSY-----S----------NF------ILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKG 399 (422)
Q Consensus 343 ~~l~~~L~~~~~~~~~-p~~-----~----------~f------~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 399 (422)
+.+++...+++|+.+. |+. + .| +.+..| .|..+-.+..+|+++||...-.+.. ..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~d~--~~ 380 (557)
T COG1982 303 KALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETGDY--SN 380 (557)
T ss_pred HHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecCCc--ee
Confidence 7777777776655432 221 1 11 234443 3788999999999999888765521 12
Q ss_pred eEEEEec---ChhhHHHHHHHHh
Q 014594 400 YVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 400 ~iRis~~---~~~~~~~l~~al~ 419 (422)
.+=++.+ .....+.|.++.+
T Consensus 381 lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 381 LLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred eEEeeeccchHHHHHHHHHHHHH
Confidence 2233333 2344566666665
No 364
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.41 E-value=2.3e-11 Score=112.52 Aligned_cols=191 Identities=21% Similarity=0.276 Sum_probs=126.6
Q ss_pred HHHHHHHhcC-------C--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEe---CCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594 111 PEVREALGQL-------K--FPYIYPDPESRRLRAALAKDSGLESDHILVG---CGADELIDLIMRCVLDPGDKIVDCP- 177 (422)
Q Consensus 111 ~~v~~al~~~-------~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~---~G~~~al~~~~~~l~~~gd~Vl~~~- 177 (422)
..|++|+++. . .+++|.|.|-+.|.+..|+.|+.+ .-++= .++|+||..++..+++|||+++...
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE--~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG 104 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAE--DALVRPQFVSGTHAIALALFGVLRPGDELLSITG 104 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-S--EEEEETTS-SHHHHHHHHHHHH--TT-EEEESSS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCch--hhhhcccccchHHHHHHHHHhcCCCCCeEEEcCC
Confidence 3466666542 1 235667778889999999999953 33332 3789999999999999999988543
Q ss_pred CCchhHHHHH----------HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC
Q 014594 178 PTFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 178 p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~ 246 (422)
.-|....... +-+|++...+++.++..+|++.++++++ +++|++++. +---.+=..++.++|+++++.
T Consensus 105 ~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~ 183 (403)
T PF06838_consen 105 KPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKF 183 (403)
T ss_dssp S--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHH
T ss_pred CchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 3444333332 3468899999988888999999999998 899999988 655555566788999998874
Q ss_pred ------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc--cceeeecCHHHHHHHHHhc
Q 014594 247 ------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL--RVGYGAFPLSIIEYLWRAK 309 (422)
Q Consensus 247 ------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~--r~G~i~~~~~~~~~l~~~~ 309 (422)
++++++|.+|.+|+....+. ..+.+++.+|+=|..| .|+ -.||++++.+++++.....
T Consensus 184 vk~~~p~~iifVDNCYGEFvE~~EP~----~vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RL 249 (403)
T PF06838_consen 184 VKEINPDVIIFVDNCYGEFVETQEPT----EVGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRL 249 (403)
T ss_dssp HHHH-TTSEEEEE-TTTTTTSSS-GG----GGT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHH
T ss_pred HHhhCCCeEEEEeCCcceeccccCcc----ccchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhh
Confidence 89999999999998533222 2233499999999876 443 2689999999999886543
No 365
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=4.9e-11 Score=108.09 Aligned_cols=317 Identities=15% Similarity=0.124 Sum_probs=210.8
Q ss_pred hCCCCCCeEEcCCC---CCCCCCCHHHHHHHhcC-CCC---C--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 90 LGRKPEDIVKIDAN---ENPYGPPPEVREALGQL-KFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 90 ~~~~~~~~i~l~~~---~~~~~~~~~v~~al~~~-~~~---~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
|+.++.+.+||=.+ .|.-..+|.+.+++.+. +.. . .|. .-..++.+-+.++++. +.++.++.+.|+.+
T Consensus 54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYn-d~~~~f~~~vt~lf~~--~kvlpmnTGaEa~E 130 (427)
T KOG1402|consen 54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYN-DVLGEFAEYVTKLFGY--DKVLPMNTGAEAVE 130 (427)
T ss_pred ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhh-hhHHHHHHHHHHhcCc--ceeeecccchhHHH
Confidence 45566777777554 35556789999999862 211 1 121 2245778888888885 57888999999999
Q ss_pred HHHHHhc------C--CCC--EEEEcCCCchhHHHHHHHcCCE--------------EEEecCCCCCCCCHHHHHHHhhc
Q 014594 161 LIMRCVL------D--PGD--KIVDCPPTFTMYEFDAAVNGAA--------------VVKVPRKSDFSLNVELIADAVER 216 (422)
Q Consensus 161 ~~~~~l~------~--~gd--~Vl~~~p~y~~~~~~~~~~g~~--------------~~~v~~~~~~~~d~~~l~~~i~~ 216 (422)
.+++... + |.+ .|+.....|++-...+-..+.. +..+| --|.++|+.+++.
T Consensus 131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~-----Y~d~eale~~l~~ 205 (427)
T KOG1402|consen 131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP-----YGDAEALEVALKS 205 (427)
T ss_pred HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec-----cCCHHHHHHHhcC
Confidence 9988432 1 322 3444444443211111111111 11111 1368999999988
Q ss_pred CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhcccc
Q 014594 217 EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G 289 (422)
++.+++++...+-.-|++.|. +..++||.. ++++|.||++......+..+.. -.-.++++. |.|+++-.=
T Consensus 206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi---lgKalSGG~ 282 (427)
T KOG1402|consen 206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI---LGKALSGGV 282 (427)
T ss_pred CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE---EeccccCCe
Confidence 889999999889999999986 456677776 9999999999988765543221 111233333 459887333
Q ss_pred ccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC-----CcccCCCc
Q 014594 290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF-----LNPYPSYS 362 (422)
Q Consensus 290 ~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~p~~~ 362 (422)
+.+..++++.+++-.+... ...|+.|+++.+++.++|+--......++.+..-+.+++.|.+++. +......|
T Consensus 283 ~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrG 362 (427)
T KOG1402|consen 283 YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRG 362 (427)
T ss_pred eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccc
Confidence 6788888999988776533 3358899999999998885422112777778888888888888642 23346778
Q ss_pred eEEEEEeC----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 363 NFILCEVT----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~~----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+..+.+- .+.++-+++-.|.++|++..+.. ++.||+.....-..++|.++++.+
T Consensus 363 l~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i 421 (427)
T KOG1402|consen 363 LLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAI 421 (427)
T ss_pred eEEEEEeccccccchhHHHHHHcccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHH
Confidence 88777663 24677778888889999888765 579999976544447788877765
No 366
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.35 E-value=1.3e-09 Score=105.03 Aligned_cols=316 Identities=14% Similarity=0.118 Sum_probs=196.6
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCEEE
Q 014594 97 IVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKIV 174 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~-~gd~Vl 174 (422)
+|||-+....-.+.+++.++|..-+ ..| .++....|++.+++++|. +.++.|..+..+-.++++.+++ +||+++
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~--E~alpthqGRgaE~Il~~~~~~~~g~e~g 118 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEKG 118 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCC--ceEEECCCCchHHHHHHHhhccccccccc
Confidence 5788664443346788888887622 346 667789999999999996 4688888889999999998988 788777
Q ss_pred EcCC-------Cc-hhHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhcC---CCeEEEEe-CCCCccC
Q 014594 175 DCPP-------TF-TMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLT-SPNNPDG 232 (422)
Q Consensus 175 ~~~p-------~y-~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~-~p~NPtG 232 (422)
+..+ .| ......+...|+.++.++. +....+|++++++.+++. +...+.+. ..|.--|
T Consensus 119 ~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GG 198 (467)
T TIGR02617 119 LDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGG 198 (467)
T ss_pred ccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCC
Confidence 5443 22 2233456778998887632 123579999999999742 23333333 2233468
Q ss_pred cCCCHHHHHHHHcC----CCeEEEccCCcc----c------cCCCchhhhh----hcCCcEEEEccChhhhccc-cccce
Q 014594 233 SIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWV----KKHDNLIVLRTFSKRAGLA-GLRVG 293 (422)
Q Consensus 233 ~~~~~e~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~----~~~~~~i~~~S~SK~~~~~-G~r~G 293 (422)
.++|.+.++++.+. |+.++.|.+-.. | .+.+..+..+ ..+ .+.+..|+||.++.| | |
T Consensus 199 qpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsvt~slsKglgApvG---g 274 (467)
T TIGR02617 199 QPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADMLAMSAKKDAMVPMG---G 274 (467)
T ss_pred EEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEEEEEcCCCCCCccc---c
Confidence 89999999888764 999999986432 1 1122222222 122 235566899988765 3 5
Q ss_pred eeecCHH----HHHHHHHhcC-------CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 294 YGAFPLS----IIEYLWRAKQ-------PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 294 ~i~~~~~----~~~~l~~~~~-------~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
+++++.+ +.++++...- ..+++.-...++...|.+.--.+..+.-....++|.+.|.+.|.-.+. .+|
T Consensus 275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~-~Gg 353 (467)
T TIGR02617 275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIGVVCQQ-AGG 353 (467)
T ss_pred eEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCCCcEEe-cCc
Confidence 6666544 3344333221 125566666666666665311112222234567788888876633334 555
Q ss_pred eEEEEEe-------C-CCCCHHHHHHHHH-hCCcEEEeCCC------C-------CCCCeEEEEec----ChhhHHHHHH
Q 014594 363 NFILCEV-------T-SGMDAKKLKDDLA-KMGVMIRHYNN------K-------ELKGYVRVSVG----KPEHTDALME 416 (422)
Q Consensus 363 ~f~~~~~-------~-~~~~~~~~~~~L~-~~gI~v~~~~~------~-------~~~~~iRis~~----~~~~~~~l~~ 416 (422)
.-++++. | ....+..+...|. +.||.-...+. + ..-..+|+.+. +..++|.+.+
T Consensus 354 hav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~ 433 (467)
T TIGR02617 354 HAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIE 433 (467)
T ss_pred cEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHH
Confidence 5555532 2 1345778888876 88887542111 0 11257999976 4566777888
Q ss_pred HHhhh
Q 014594 417 CLMHL 421 (422)
Q Consensus 417 al~~l 421 (422)
++..+
T Consensus 434 ~~~~~ 438 (467)
T TIGR02617 434 AFKHV 438 (467)
T ss_pred HHHHH
Confidence 77654
No 367
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=4.6e-10 Score=105.01 Aligned_cols=276 Identities=18% Similarity=0.195 Sum_probs=178.8
Q ss_pred hCCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CC-CCC---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHH
Q 014594 90 LGRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LK-FPY---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID 160 (422)
Q Consensus 90 ~~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~-~~~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~ 160 (422)
++..+.++||+-++-- -+ +..|++.+++.+ +. ..+ .|-....-++.+.+.+..+ -..+.|.+++++++|++
T Consensus 51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne 130 (433)
T KOG1401|consen 51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE 130 (433)
T ss_pred ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence 3445678899877632 22 347899999875 22 212 2211124567777777663 25789999999999999
Q ss_pred HHHHHhcC---C---C--CEEEEcCCCchhHHHHH-HHcCCEEEEecCC---CC----CCCCHHHHHHHhhcCC--CeEE
Q 014594 161 LIMRCVLD---P---G--DKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI 222 (422)
Q Consensus 161 ~~~~~l~~---~---g--d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~---~~----~~~d~~~l~~~i~~~~--~~~i 222 (422)
.+++.-.+ . - .+++....+|++-...+ ...+......|.+ ++ ..-|..++++.++.++ ..++
T Consensus 131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV 210 (433)
T KOG1401|consen 131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV 210 (433)
T ss_pred HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence 99984321 1 1 24888888887443332 2233333333321 11 1236899999887543 6889
Q ss_pred EEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceee
Q 014594 223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (422)
Q Consensus 223 ~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i 295 (422)
++...+--.|.+. ++|.+..| |+. ++++|.||++..|...+. ....+...+++. ++.|.++ .|+.+|..
T Consensus 211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~---t~aK~L~-gGlPigA~ 286 (433)
T KOG1401|consen 211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDIT---TVAKPLG-GGLPIGAT 286 (433)
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcce---eehhhcc-CCceeEEE
Confidence 8887777677766 44555444 444 999999999998764332 222333333333 5679987 88999999
Q ss_pred ecCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEE
Q 014594 296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFI 365 (422)
Q Consensus 296 ~~~~~~~~~l~~~~~-----~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~ 365 (422)
++++++.+.+..... .|+.|+++..++...|+ +++++. +.+.-+..|+.+.+.+.+.+.... ....+.++
T Consensus 287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~i 366 (433)
T KOG1401|consen 287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVI 366 (433)
T ss_pred eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEE
Confidence 999999998864333 47788888888777665 578888 778888889999998887653322 23455665
Q ss_pred EEEe
Q 014594 366 LCEV 369 (422)
Q Consensus 366 ~~~~ 369 (422)
.+.+
T Consensus 367 g~~~ 370 (433)
T KOG1401|consen 367 GFEF 370 (433)
T ss_pred EEEE
Confidence 5443
No 368
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.20 E-value=4.4e-10 Score=108.14 Aligned_cols=275 Identities=18% Similarity=0.217 Sum_probs=164.7
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhcC-C-CCC----CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-FPY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-~~~----~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.+++.++|+..+ ...++ .+|++.+++.+. . ..+ .+..+...+|.+.|.+.++-..+++++++++++|++.+
T Consensus 13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~A 92 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAA 92 (339)
T ss_dssp TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHH
Confidence 356778999755 33343 468888888762 1 111 22223356788888888854557999999999999999
Q ss_pred HHHhc-------CC-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC-----CCHHHHHHH---
Q 014594 163 MRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-----LNVELIADA--- 213 (422)
Q Consensus 163 ~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-----~d~~~l~~~--- 213 (422)
++... .+ ..+|+....+|++....+.. .+ ..+..+|.++... -..+.+++.
T Consensus 93 lkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T PF00202_consen 93 LKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA 172 (339)
T ss_dssp HHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh
Confidence 99654 12 37899999999754332222 11 1245555321100 001112222
Q ss_pred hhcCCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhc
Q 014594 214 VEREKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~ 286 (422)
...+++.+|++.......|...+ . +++.++|+. |+++|+||++..|...+.. ....+..+++++ ++|.++
T Consensus 173 ~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~---~gK~l~ 249 (339)
T PF00202_consen 173 LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT---FGKGLG 249 (339)
T ss_dssp HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE---EEGGGG
T ss_pred hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccc---cccchh
Confidence 23356788888866666676664 3 444555555 9999999999998644432 223333444443 469998
Q ss_pred cccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCC
Q 014594 287 LAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPS 360 (422)
Q Consensus 287 ~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~ 360 (422)
.|+.+|.+++++++.+.+... ..+|+.++++..++.+.|+--+-.+..++.++..+++.+.|++ .+.+.-...
T Consensus 250 -gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 328 (339)
T PF00202_consen 250 -GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRG 328 (339)
T ss_dssp -TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred -hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEee
Confidence 679999999999998876432 3457788888888888876421111344444555555554443 344433456
Q ss_pred CceEEEEEeC
Q 014594 361 YSNFILCEVT 370 (422)
Q Consensus 361 ~~~f~~~~~~ 370 (422)
.|.++.+++.
T Consensus 329 ~Gl~~~ie~~ 338 (339)
T PF00202_consen 329 IGLMIGIELV 338 (339)
T ss_dssp ETTEEEEEES
T ss_pred eCeEEEEEEE
Confidence 6777777763
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=1.5e-09 Score=100.69 Aligned_cols=316 Identities=16% Similarity=0.107 Sum_probs=193.7
Q ss_pred CCCeEEcCCCC-CCCCCCHHHHHH----HhcCCCC----C-CCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANE-NPYGPPPEVREA----LGQLKFP----Y-IYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~~~v~~a----l~~~~~~----~-~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.++++|.+.. -.+.-.+++.+. +.+...+ . .|++- -...+++.||+++|+ ++.|+...|-+ +++-+
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-E~aivYs~gF~-ti~S~ 170 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-EDAIVYSYGFS-TIESA 170 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-cceeeeccccc-hhhhc
Confidence 55677776543 234445555543 3333222 2 24444 356899999999996 56788877766 56667
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----------C-CeEEEEeCCCCc
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----------K-PKCIFLTSPNNP 230 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----------~-~~~i~l~~p~NP 230 (422)
+.++++.||.|.+.+-.........+...-.++.+. +.|.+.+++.+.+. . -+.|++..-.-+
T Consensus 171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fk-----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N 245 (467)
T KOG1358|consen 171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFK-----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN 245 (467)
T ss_pred chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEec-----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence 777999999998888776666666666666666665 34667776665421 1 245666677777
Q ss_pred cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC--c-hhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--S-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~ 304 (422)
||.+.+..++-++... ...+|+||.|+...-+. . ... ..+..+-+++++|+.-+++..| |+.+++.-++ .
T Consensus 246 ~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~-~ 321 (467)
T KOG1358|consen 246 TGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA-D 321 (467)
T ss_pred CCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE-e
Confidence 9999999999999987 99999999998654221 1 111 1223455688899988776555 7777744333 2
Q ss_pred HHHhcC---CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC--C--C
Q 014594 305 LWRAKQ---PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G--M 373 (422)
Q Consensus 305 l~~~~~---~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--~--~ 373 (422)
.++... -| +.++....++..++.-.+|-. +.+.++.....+-+.|....+..+ ....+..+.+.+.. + .
T Consensus 322 hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e 401 (467)
T KOG1358|consen 322 HQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSRE 401 (467)
T ss_pred eeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchH
Confidence 333322 23 345556666666665544433 556666666666667766543332 33445555555542 1 1
Q ss_pred C----HHHHHHHHHhCCcEEEeCCC------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 374 D----AKKLKDDLAKMGVMIRHYNN------KELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 374 ~----~~~~~~~L~~~gI~v~~~~~------~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+ -+++++.+..+|+.+..... ...+..+||++...-..++++++...
T Consensus 402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ 458 (467)
T KOG1358|consen 402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL 458 (467)
T ss_pred HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence 1 23455565545888764322 34466899999753333555555443
No 370
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=5.8e-09 Score=96.11 Aligned_cols=313 Identities=17% Similarity=0.165 Sum_probs=188.2
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc---chHHH---HHHH-----HHHcCCCCC----CEEEeCCHHHHH
Q 014594 98 VKIDANENPYGPPPEVREALGQL---KFPYIYPDP---ESRRL---RAAL-----AKDSGLESD----HILVGCGADELI 159 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~~---~~~~l---r~~l-----a~~~~~~~~----~i~~~~G~~~al 159 (422)
|.|=..||-. +..|++|+... .+..+||.. |..++ .|.| -+.|+++|+ +|..-+|+. |.
T Consensus 43 ieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN 119 (477)
T KOG2467|consen 43 IELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN 119 (477)
T ss_pred eeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence 6666666644 57788888752 344455431 11222 2222 234677766 566655554 67
Q ss_pred HHHHHHhcCCCCEEE---EcCCCch--hHHHHHHHcCCEEEEec-----CC-CCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 160 DLIMRCVLDPGDKIV---DCPPTFT--MYEFDAAVNGAAVVKVP-----RK-SDFSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl---~~~p~y~--~~~~~~~~~g~~~~~v~-----~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
..+..++++|+|+|. +++..|- +|....+.-.+.-+++. .+ ...-+|.|.||+....-+||+|+.- .
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG--~ 197 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAG--T 197 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEec--c
Confidence 778888999999987 3444552 33322222233333322 22 4456899999998766899988742 2
Q ss_pred CccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-----
Q 014594 229 NPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI----- 301 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~----- 301 (422)
.-.-..++-.++++|++. |.+++.|.+|.. ++..+-....+ ++- +|+..+.+|+ +.|-|.|.|..++.+
T Consensus 198 SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF-ey~-DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~ 273 (477)
T KOG2467|consen 198 SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF-EYC-DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKP 273 (477)
T ss_pred ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-ccc-ceeecccccc--ccCCcceeEEEeccCCcCCC
Confidence 224577899999999998 999999999974 22211111111 221 3777788996 478898988864321
Q ss_pred ----------HHHHHHhcCC---CCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCce-E
Q 014594 302 ----------IEYLWRAKQP---YNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSN-F 364 (422)
Q Consensus 302 ----------~~~l~~~~~~---~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-f 364 (422)
-+++...-.| .++..-...+...+|++ +++.+-.++..++.+.|.+.|.+.|...+.....+ .
T Consensus 274 k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHl 353 (477)
T KOG2467|consen 274 KQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHL 353 (477)
T ss_pred CCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceE
Confidence 1222222222 22322334444445554 56666777888999999999999886555444344 4
Q ss_pred EEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014594 365 ILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLM 419 (422)
Q Consensus 365 ~~~~~~-~~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~ 419 (422)
+++++. .+.|...+...|..-+|.+. ||+. ...++.|||... .+++.+++.+.+.
T Consensus 354 vLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~ 421 (477)
T KOG2467|consen 354 VLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFID 421 (477)
T ss_pred EEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHH
Confidence 667875 47777776666666677775 4444 345789999842 2444555554443
No 371
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.16 E-value=1e-08 Score=93.33 Aligned_cols=257 Identities=14% Similarity=0.080 Sum_probs=175.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCC-Cch----hHHHHHHHcCCEEEEecCCCCCC
Q 014594 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCPP-TFT----MYEFDAAVNGAAVVKVPRKSDFS 204 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p-~y~----~~~~~~~~~g~~~~~v~~~~~~~ 204 (422)
..|-.+++-+.|..+.+++++.+++-.++.++.+.++ +|+.||+++- +|+ .....++..|.. .+-...
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~ 153 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGV 153 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceee
Confidence 4577788888899999999999999999888887654 5788888764 443 223344444433 112224
Q ss_pred CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChh
Q 014594 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK 283 (422)
.++++++++++ +++.++++++.|--||+.++...+.+++.. |++++-|-+|+-... ...+...+..+-+++-.|
T Consensus 154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav----p~~Lh~~gaDfaigcsyK 228 (407)
T COG3844 154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV----PVDLHAAGADFAIGCSYK 228 (407)
T ss_pred eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc----ceeecccCCCeeeeeece
Confidence 56789999997 789999999999999999999999999987 999999999985432 112223455678888888
Q ss_pred hhc-cccccceeeecCHHHHHHHHHhcCC-------------------------CCCcHHHHHHHHHHccC---ChHHHH
Q 014594 284 RAG-LAGLRVGYGAFPLSIIEYLWRAKQP-------------------------YNVSVAAEVAACAALQN---PIYLEV 334 (422)
Q Consensus 284 ~~~-~~G~r~G~i~~~~~~~~~l~~~~~~-------------------------~~~~~~~~~aa~~~L~~---~~~~~~ 334 (422)
-++ -|| -.+++.+.++..+........ .+++.++..+...+|+- -+.-++
T Consensus 229 YLNgGPG-apa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~l 307 (407)
T COG3844 229 YLNGGPG-APAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITEL 307 (407)
T ss_pred eccCCCC-CceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHH
Confidence 764 244 355666655555443321110 23445555555555543 232227
Q ss_pred HHHHHHHHHHHHHHHccC-C--CCc-ccC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 335 KEALIKERERLFKLLKDV-P--FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 335 ~~~~~~~~~~l~~~L~~~-~--~~~-~~p----~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
+++--...+++.+.++.. + ++. ..| ..|..+.+..| ...++.++|-++||..-.-. ++.+|+.++
T Consensus 308 R~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD~R~----P~vlRfgft 380 (407)
T COG3844 308 RKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGDFRE----PDVLRFGFT 380 (407)
T ss_pred HHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccccccC----CCeeeecCc
Confidence 777777778887777653 1 222 233 34667888876 68899999999999865433 689999976
No 372
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.16 E-value=2.8e-08 Score=104.87 Aligned_cols=294 Identities=16% Similarity=0.147 Sum_probs=186.8
Q ss_pred CCCCCCCCCCHHHHHHHhc-CCCCCCC-C---C--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cC
Q 014594 101 DANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LD 168 (422)
Q Consensus 101 ~~~~~~~~~~~~v~~al~~-~~~~~~y-~---~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~ 168 (422)
+.|.-+.-.|+.+.+.+.+ -..-..| | + .| .-+++..++++.|.+..|.-+..+++.+.++++.+. ..
T Consensus 70 g~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~ 149 (939)
T TIGR00461 70 GMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS 149 (939)
T ss_pred CCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh
Confidence 4444444456777756554 2211233 3 2 12 237888999999999888888899999888777664 22
Q ss_pred --CCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 169 --PGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 169 --~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++++|++++-.|+.+... ++..|.+++.++ +++|++.+ ++.++++.+|+. .|.+.+.+++.+
T Consensus 150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i~~ 217 (939)
T TIGR00461 150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQLID 217 (939)
T ss_pred cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHHHH
Confidence 347899999999766533 346899988874 44565554 467787788876 999999999988
Q ss_pred HHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc----ccccceeeecCHHHHHHHHHh---------
Q 014594 243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYLWRA--------- 308 (422)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~r~G~i~~~~~~~~~l~~~--------- 308 (422)
+++. |.+++++.-...+. .+....+.+.+|++++- |.||+ .|-..|++.+++++.+.+--.
T Consensus 218 ~~h~~gal~~~~ad~~al~----ll~~Pge~GaDi~vg~~-q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~ 292 (939)
T TIGR00461 218 ALHSHKSLVSVAADLMALT----LLTPPGHYGADIVLGSS-QRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDAL 292 (939)
T ss_pred HHHHcCCEEEEEechHHhC----CcCCHHHcCCcEEeeCC-CccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCC
Confidence 8887 88888854322222 11222344556777654 43554 244478888888777654200
Q ss_pred ------------cC-------CCC--Cc-HHHHHHHH--HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce
Q 014594 309 ------------KQ-------PYN--VS-VAAEVAAC--AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN 363 (422)
Q Consensus 309 ------------~~-------~~~--~~-~~~~~aa~--~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~ 363 (422)
.+ ..+ .+ .+....+. ..+-.++.+. +.++...+..++.+.|++.|+..+.+ .+
T Consensus 293 G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~f 370 (939)
T TIGR00461 293 GNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TW 370 (939)
T ss_pred CCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc
Confidence 00 001 11 11111111 2233345566 78888899999999999976433333 33
Q ss_pred E--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 364 F--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 364 f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
| +.++++ ..+++++.+.++++||.++... ++.+++|+. +.++++.|.+++
T Consensus 371 F~~~~v~~~-~~~~~~i~~~~~~~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~ 425 (939)
T TIGR00461 371 FDTLTVKVG-NGISSELLKAAEEFNINLRAVD----TTTVGIALDETTTKADVENLLKVF 425 (939)
T ss_pred cceEEEEeC-CCCHHHHHHHHHHCCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHh
Confidence 3 345553 2468899999999999988743 468999986 455566666665
No 373
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.14 E-value=2.8e-09 Score=103.63 Aligned_cols=236 Identities=19% Similarity=0.116 Sum_probs=146.0
Q ss_pred HHHHHHHHHcCCCC-------CCEEEeCCHHHHHHHHHHHhcC--------CC-----C-EEEEcCCCchhHHHHHHHcC
Q 014594 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNG 191 (422)
Q Consensus 133 ~lr~~la~~~~~~~-------~~i~~~~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g 191 (422)
++.+.+++++|.+. ..=++|+|+++++-.++.+..+ .| . .|++++-+|......+...|
T Consensus 83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG 162 (373)
T PF00282_consen 83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG 162 (373)
T ss_dssp HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence 45566667778762 2468899999998776653311 11 2 46677778999999999999
Q ss_pred CEEEEecCCCCCCCCHHHHHHHhhcC--C---CeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-Cc
Q 014594 192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ES 264 (422)
Q Consensus 192 ~~~~~v~~~~~~~~d~~~l~~~i~~~--~---~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-~~ 264 (422)
..++.||.++++.+|+++|++++.+. + +-+|+.+-....||.+-+.++|.+|++. ++|+.+|.+|.....- +.
T Consensus 163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~ 242 (373)
T PF00282_consen 163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE 242 (373)
T ss_dssp SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence 99999998888899999999988542 2 2255556888999999999999999987 9999999999873210 11
Q ss_pred hhhhhhc-CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC-------------------CCCcH----HHH
Q 014594 265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-------------------YNVSV----AAE 319 (422)
Q Consensus 265 ~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~-------------------~~~~~----~~~ 319 (422)
....... ....=+..+++|.++ .....|+++.+. ..+......... ...+. +..
T Consensus 243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~ 321 (373)
T PF00282_consen 243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKL 321 (373)
T ss_dssp TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHH
T ss_pred ccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHH
Confidence 1111111 111123447899665 567889888754 333322110000 11222 222
Q ss_pred HHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEe
Q 014594 320 VAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV 369 (422)
Q Consensus 320 ~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~ 369 (422)
.+....+....+.+..++..+..+++.+.|++.+...+ .+..-+.+.+++
T Consensus 322 w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 322 WATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 22222232334444778888999999999999876553 455556666554
No 374
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.99 E-value=4.4e-08 Score=88.10 Aligned_cols=178 Identities=19% Similarity=0.248 Sum_probs=125.7
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCchhHHHH----------HHHc
Q 014594 124 YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFD----------AAVN 190 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~----------~~~~ 190 (422)
++|.|-|-..|.+-.|+.++.+.. +..+. ++|+|+..++..+++|||+.+... --|...... .+-+
T Consensus 60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 60 YGYDDLGRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred CCccccchhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 555667888899999999986443 33343 456799999999999999977433 234322222 2446
Q ss_pred CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC------CCeEEEccCCccccCCC
Q 014594 191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLE 263 (422)
Q Consensus 191 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~------~~~li~Deay~~~~~~~ 263 (422)
|+....+|+..+..+|.+.+...++ +++|+|.+. +-.--.--.++.++++++.+. ++++.+|.+|.+|....
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~ 217 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK 217 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence 7888889987778999999999998 899999976 432222234567777777653 89999999999998432
Q ss_pred chhhhhhcCCcEEEEccChhhhcccccc--ceeeecCHHHHHHHHHh
Q 014594 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRA 308 (422)
Q Consensus 264 ~~~~~~~~~~~~i~~~S~SK~~~~~G~r--~G~i~~~~~~~~~l~~~ 308 (422)
.+. .-+.++..+|+-|.-| .|+- .||+++..+++++..-+
T Consensus 218 EPt----~vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~yR 259 (416)
T COG4100 218 EPT----HVGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAAYR 259 (416)
T ss_pred Ccc----ccchhhhccceeeCCC-CceeeccceeechHHHHHhhcee
Confidence 211 1233478888888765 3422 58999999999877533
No 375
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.96 E-value=2.3e-09 Score=90.09 Aligned_cols=86 Identities=24% Similarity=0.496 Sum_probs=66.4
Q ss_pred CCCCeEEcCCCCCCC-----------------CCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc----C----CCC
Q 014594 93 KPEDIVKIDANENPY-----------------GPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G----LES 146 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~-----------------~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~----~----~~~ 146 (422)
.+..+|+|+..||.+ .+++.+.+++.++ ..|++. |..+||+++++++ | +++
T Consensus 41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p 117 (153)
T PLN02994 41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDA 117 (153)
T ss_pred CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccch
Confidence 345678888877743 2233434444442 336544 7899999999986 4 468
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (422)
++|++|+|++++++.+++++++|||.|+++.|+|+
T Consensus 118 d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 118 DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 89999999999999999999999999999999996
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.89 E-value=3.2e-07 Score=87.12 Aligned_cols=212 Identities=17% Similarity=0.104 Sum_probs=145.4
Q ss_pred CHHHHHHHhcC-C---CCCCCCCcc--hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE-----EcC
Q 014594 110 PPEVREALGQL-K---FPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP 177 (422)
Q Consensus 110 ~~~v~~al~~~-~---~~~~y~~~~--~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~~gd~Vl-----~~~ 177 (422)
.+++++++... . ....|-..+ ...++..-...+++. .+.++++++.+.++.+++.++.+++..|+ ++
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~- 118 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE- 118 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence 57777776652 1 112222222 234554444445553 57899999999999999998887555443 33
Q ss_pred CCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC-ccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN-PDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 178 p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N-PtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
+..+......+..|++++.+-.. ..-...+++.+|. +++++++=.+-+| +-=...+.+++.+|++. |+++++|.+
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a 195 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA 195 (395)
T ss_pred CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence 56678899999999999999742 2456899999998 6787776664443 44445788999999997 999999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHcc
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~ 327 (422)
-.............-..+.++++.|-.|.+| |.+-|.+++.+++++++++..- .+.+.....++..++|+
T Consensus 196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 7665443333333334566688889999865 7779999999999998876543 34455555555555544
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.83 E-value=6.6e-07 Score=85.49 Aligned_cols=260 Identities=18% Similarity=0.151 Sum_probs=174.7
Q ss_pred HHHHHHHHHHcCCCCCC-EEEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCchhHHHHHHHcCCEEEEecCC-C
Q 014594 132 RRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVL----D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S 201 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~-i~~~~G~~~al~~~~~~l~----~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~ 201 (422)
.+....++.+++.+++. =..|.|+++++.++.+... + .| ..++++...+..+...++.++.++..||.+ .
T Consensus 123 ~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 123 AECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 45666677777765442 2567888998666555431 1 23 357777778889999999999999999976 7
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCC--Cchh--hhhhcCCcE
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRM--EWVKKHDNL 275 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~--~~~~--~~~~~~~~~ 275 (422)
+|.+|+.++.+.++ +++.+++.+-|+.|+|.+=+.+++.++.-. ++.+.+|.+-..|... .... ..+......
T Consensus 203 ~~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred ceEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 78999999999998 789999999999999999999999888654 9999999998877641 1111 111111111
Q ss_pred EEEccChhhhccccccceeeec-CHHHHH-HHH-------HhcCCCC-------CcHHHHHHHHHHccCChHHHHHHHHH
Q 014594 276 IVLRTFSKRAGLAGLRVGYGAF-PLSIIE-YLW-------RAKQPYN-------VSVAAEVAACAALQNPIYLEVKEALI 339 (422)
Q Consensus 276 i~~~S~SK~~~~~G~r~G~i~~-~~~~~~-~l~-------~~~~~~~-------~~~~~~~aa~~~L~~~~~~~~~~~~~ 339 (422)
=.-.+-+| ||+.--..||++= +.++.. ++. -....++ ....+|.++..-|..++|.+.-+++.
T Consensus 282 Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~iv 360 (491)
T KOG1383|consen 282 SISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIV 360 (491)
T ss_pred eEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 11223356 6665555788774 333322 111 0011111 12345666666666678888777899
Q ss_pred HHHHHHHHHHccCCCCccc-CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594 340 KERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 340 ~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 394 (422)
+..+.+++.+++++++.+. ++.-.|+...- ...+.-++.+.|.++|..+....-
T Consensus 361 e~~~~l~egie~i~~i~i~gkp~vs~~~~~s-~~~~i~elsd~l~~~GW~lnalq~ 415 (491)
T KOG1383|consen 361 ETARKLREGIENIKGIKIVGKPLVSFILFGS-NDVNIFELSDLLRKKGWILNALQF 415 (491)
T ss_pred HHHHHHHHhhhccccceecCCCcEEEEEccC-CccchhhhhHHHHhcCcCccccCC
Confidence 9999999999998877754 32333333322 245667888999999998876654
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.82 E-value=2.4e-07 Score=89.95 Aligned_cols=266 Identities=16% Similarity=0.171 Sum_probs=144.9
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCC
Q 014594 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSL 205 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~ 205 (422)
++...++++.|.+..+.-+-.|++.+-+.++.+. -+..++|+++.-.|+.+... +...|.+++.++.+++...
T Consensus 114 e~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~ 193 (429)
T PF02347_consen 114 EYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTT 193 (429)
T ss_dssp HHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB
T ss_pred HHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCc
Confidence 7888999999987666667778887777665543 22335899999999877663 3447899999997655454
Q ss_pred CHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 284 (422)
| .+++.+|++.+||. .|.+-+.+++.++++. |.++++ .+.- .+- ..+....+.+.+|++++ +|.
T Consensus 194 d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~-~aL--~~l~~Pge~GADI~vg~-~Q~ 258 (429)
T PF02347_consen 194 D---------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADP-NAL--GGLKSPGEYGADIVVGE-HQT 258 (429)
T ss_dssp ----------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGC-CGC--CTC--GGGGT-SEEEEC-CTT
T ss_pred c---------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCH-HHH--hCcCChhhcCccEEeeC-CCC
Confidence 5 37899999999986 9999999999999886 877776 3321 111 11222234455577776 666
Q ss_pred hcc----ccccceeeecCHHHHHHHH----------------------------HhcCC--CCCc-HHHHHH--HHHHcc
Q 014594 285 AGL----AGLRVGYGAFPLSIIEYLW----------------------------RAKQP--YNVS-VAAEVA--ACAALQ 327 (422)
Q Consensus 285 ~~~----~G~r~G~i~~~~~~~~~l~----------------------------~~~~~--~~~~-~~~~~a--a~~~L~ 327 (422)
||. .|-..|++.+..++++++- +-+.. .+.+ .+...+ +...+-
T Consensus 259 fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~ 338 (429)
T PF02347_consen 259 FGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL 338 (429)
T ss_dssp TT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh
Confidence 653 3445788888888776543 11111 1122 222222 222232
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 404 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis 404 (422)
.++.+. +.++...+..++.+.|+++. ........+| +....+ ....+++.+.....|+..... ..+++-|+
T Consensus 339 G~~GL~~iA~~~~~~A~yl~~~L~~~~-~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~~~----~~~~~li~ 412 (429)
T PF02347_consen 339 GPEGLREIAERIHLNAHYLAERLKKIY-GLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLRYP----DDGALLIC 412 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCTT-BECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEGGG-----SSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCcccc----CCCeEEEE
Confidence 345666 88899999999999999973 2223333333 333332 222223334444445333222 23488888
Q ss_pred ecChhhHHHHHHHHh
Q 014594 405 VGKPEHTDALMECLM 419 (422)
Q Consensus 405 ~~~~~~~~~l~~al~ 419 (422)
+....+.++++..++
T Consensus 413 ~TE~~t~edid~lv~ 427 (429)
T PF02347_consen 413 VTETRTKEDIDRLVE 427 (429)
T ss_dssp --TT--HHHHHHHHH
T ss_pred ccCCCCHHHHHHHHh
Confidence 875444455555443
No 379
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.82 E-value=1.1e-06 Score=83.19 Aligned_cols=318 Identities=16% Similarity=0.163 Sum_probs=177.9
Q ss_pred CCeEEcCCCCCCCCCCHHHH-HHHhcCCCCCCC-CCc---chHHHHHHHHHH----cCCCCCCEEEeCCHHHHHH--HHH
Q 014594 95 EDIVKIDANENPYGPPPEVR-EALGQLKFPYIY-PDP---ESRRLRAALAKD----SGLESDHILVGCGADELID--LIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~-~al~~~~~~~~y-~~~---~~~~lr~~la~~----~~~~~~~i~~~~G~~~al~--~~~ 163 (422)
..++.|++..+-+.+--+.+ ....++...+-| |.. |+.++-..|++| -|.+.-.+..-.|++.=.. +++
T Consensus 66 ~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~I 145 (496)
T COG1003 66 RGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAI 145 (496)
T ss_pred cCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHH
Confidence 45678887776665432221 111222222444 432 455544444444 4665444445455543222 333
Q ss_pred HHh-cCCC----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCV-LDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l-~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
+.. -..| +.||+++..|......+.+.|.+|+.|+.+++..+|+++|+++.. +++.++.+++||. .|.. .+
T Consensus 146 r~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPsT-~GvF--E~ 221 (496)
T COG1003 146 RAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPST-LGVF--EE 221 (496)
T ss_pred HHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhc-cceeEEEeccCcc-cccc--hh
Confidence 333 2233 679999999988888888999999999998888999999999998 7999999999986 4543 35
Q ss_pred HHHHHHc---C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHH---
Q 014594 239 DLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWR--- 307 (422)
Q Consensus 239 ~l~~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~--- 307 (422)
.|.+||+ . |..|..|.+-..-..+-.. .++-+.+++=.-++|.|+.| |-..|=+.+..++...+-.
T Consensus 222 ~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r---PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~ 298 (496)
T COG1003 222 DIREICEIVHEAGGQVYYDGANLNAIVGLAR---PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVV 298 (496)
T ss_pred hHHHHHHHHHHcCCEEEecCcchhhhhcccc---ccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcc
Confidence 5555555 3 9999999886532111111 11222334433467777432 3334545544444433321
Q ss_pred -------------------hcCCCCCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC--c-
Q 014594 308 -------------------AKQPYNVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY--S- 362 (422)
Q Consensus 308 -------------------~~~~~~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~- 362 (422)
...+|+- ......+.+.+. ..+.+. .-+.---+..++...|+..=.+...+.. .
T Consensus 299 ~~~~~~y~~~~~~~~s~g~~~a~~Gs-~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~H 377 (496)
T COG1003 299 YHDVGEYRLDYDGKKSIGVSAAPYGS-ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAH 377 (496)
T ss_pred cCCCccccccCCCCccceeeccccCc-chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCccee
Confidence 0011211 111222222222 234444 5555556788899999862111112221 1
Q ss_pred eEEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 363 NFILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
-|+ ++.. .+.+..+++++|.++|+.--.-..+ -..+.+-|=... .++.|++.+++..|
T Consensus 378 E~i-ld~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I 444 (496)
T COG1003 378 ECI-LDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAI 444 (496)
T ss_pred EEE-eechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence 122 2222 2678999999999999876543322 135666666553 34566666666554
No 380
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.81 E-value=1.5e-07 Score=84.67 Aligned_cols=307 Identities=14% Similarity=0.120 Sum_probs=175.6
Q ss_pred CCCCeEEcCCCCCCC-CCCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-
Q 014594 93 KPEDIVKIDANENPY-GPPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV- 166 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~-~~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l- 166 (422)
++..++|.-+|.... ..+|+|.+|... +. ...++-.....+..+.|...+. .-+-+++++++++|.+++++.-
T Consensus 45 ~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlP-eLsvc~F~NSGSEANDLALRLAR 123 (452)
T KOG1403|consen 45 EGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLP-ELSVCFFVNSGSEANDLALRLAR 123 (452)
T ss_pred CcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCC-CceEEEEecCCchhhHHHHHHHH
Confidence 445555554444333 467888887764 32 2233321112222222222222 1346899999999999999843
Q ss_pred --cCCCCEEEEcCCCchhHHHHH------HH-cCC-----EEEEe-cCCCCC----------CCC-----HHHHHHHhhc
Q 014594 167 --LDPGDKIVDCPPTFTMYEFDA------AV-NGA-----AVVKV-PRKSDF----------SLN-----VELIADAVER 216 (422)
Q Consensus 167 --~~~gd~Vl~~~p~y~~~~~~~------~~-~g~-----~~~~v-~~~~~~----------~~d-----~~~l~~~i~~ 216 (422)
.+..| |++.+..|++..... +. .|. ..+.| |.++-+ .-| .+.+++.++.
T Consensus 124 ~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d 202 (452)
T KOG1403|consen 124 NFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQD 202 (452)
T ss_pred hhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHH
Confidence 33345 566666664322110 00 111 11111 111110 001 2334444321
Q ss_pred -----CCCeEEEEeCCCCccCcCCCHHH-HHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594 217 -----EKPKCIFLTSPNNPDGSIINDED-LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 217 -----~~~~~i~l~~p~NPtG~~~~~e~-l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
.+..+.+-.+-++-.|.++|+.. ++++++. |.+.|.||++..|..-++....+..++.+--+-++.|..|
T Consensus 203 ~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG 282 (452)
T KOG1403|consen 203 QLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG 282 (452)
T ss_pred HHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC
Confidence 23445555566777888887754 4445543 8999999999999876666555555554444557789998
Q ss_pred cccccceeeecCHHHHHHHHHhc----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCccc
Q 014594 287 LAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPY 358 (422)
Q Consensus 287 ~~G~r~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~ 358 (422)
.|..++.+++.+++.+.+.... ..|+.|+.+.++..+.++.-+-..+.+.-.+..++|...|+++ ..+--.
T Consensus 283 -NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv 361 (452)
T KOG1403|consen 283 -NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDV 361 (452)
T ss_pred -CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceecc
Confidence 9999999999999999887532 3477888888888888763221114445555556666666543 222224
Q ss_pred CCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEE
Q 014594 359 PSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVS 404 (422)
Q Consensus 359 p~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis 404 (422)
...|.|+-+++-+ ...+..+..+|+ .++|++..-+. ..+.+.|-
T Consensus 362 RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiK 414 (452)
T KOG1403|consen 362 RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIK 414 (452)
T ss_pred ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecC
Confidence 5678898887742 123455667777 56788875332 23555553
No 381
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.79 E-value=3.5e-06 Score=86.20 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=73.1
Q ss_pred EEEEcCCCchhHHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhc---CC--CeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---EK--PKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---~~--~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+|+++.-.|......+...|. .++.||.++++.+|++.|++.+.+ .+ +-+|+.+-....+|.+=|.++|.+|
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l 303 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL 303 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence 577788789999999999998 589999888899999999998853 22 3345556788899999999999999
Q ss_pred Hc---C-CC--eEEEccCCcccc
Q 014594 244 LE---M-PI--LVVLDEAYTEFS 260 (422)
Q Consensus 244 ~~---~-~~--~li~Deay~~~~ 260 (422)
++ . |+ ++.+|.||..+.
T Consensus 304 ~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 304 RNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHHHcCCceeEeeeccccchh
Confidence 83 2 65 799999999753
No 382
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.74 E-value=2.6e-05 Score=74.15 Aligned_cols=302 Identities=17% Similarity=0.136 Sum_probs=186.5
Q ss_pred EcCCCCCCCCCCHHHHHHHhc-CCCCCCC-CC-c----c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 99 KIDANENPYGPPPEVREALGQ-LKFPYIY-PD-P----E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~-~----~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
.++.|.-+.-.|+.|.+.+.+ -.+-..| |. + | .-++...++++.|.+-.|--+--++|.+-++++.+..
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 345555555566767645544 3332334 32 1 2 2367788888889887787777888888777776652
Q ss_pred -C--CCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC-cCCCHHH
Q 014594 168 -D--PGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDED 239 (422)
Q Consensus 168 -~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~e~ 239 (422)
. +..+++++.-.|+.+....+ -.|.+++.++.+ |.+.+++. ....+-++++.+|+. .| ...+...
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~~-~G~~~~d~~~ 231 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPNT-FGIVEEDLRA 231 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCCC-CCccchhHHH
Confidence 2 24789999999987665543 356777777643 78888888 545788999999985 77 6666888
Q ss_pred HHHHHcC-CCeEEE--ccCCccccCCCchhhhhhcCCcEEEEccChhh---hccccccceeeecCHHHHHHHH-------
Q 014594 240 LLKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR---AGLAGLRVGYGAFPLSIIEYLW------- 306 (422)
Q Consensus 240 l~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~---~~~~G~r~G~i~~~~~~~~~l~------- 306 (422)
+.++++. +.++++ |-.-. ..+.....++-+|++++..-. +|..|-..||+.+..++.+++-
T Consensus 232 l~~~~h~~~al~~v~aDplaL------~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S 305 (450)
T COG0403 232 LIEAAHSAGALVIVAADPLAL------GLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS 305 (450)
T ss_pred HHHHHhhcCCEEEEEechhHh------hccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence 8888876 665543 32111 122223356667888887652 2334667888888888766432
Q ss_pred ---------------------HhcCCCCC--cH-H--HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Cccc
Q 014594 307 ---------------------RAKQPYNV--SV-A--AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNPY 358 (422)
Q Consensus 307 ---------------------~~~~~~~~--~~-~--~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~~ 358 (422)
+-+...|. +. + ..+++.+.+..++.+. +.++..+...++.+.|++.+. ..+.
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~ 385 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV 385 (450)
T ss_pred ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec
Confidence 11111111 11 1 1222223333455666 888999999999999997652 3333
Q ss_pred CCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 359 PSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 359 p~~~~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
.+ .+| +.++++. ...+.+.++....|+-++.... +.+=|++. +.++++.|.+++.
T Consensus 386 ~~-~fFdt~~v~~~~-~~~~~l~~~~~~~G~~L~~~~~----~~~~ia~tEt~t~~~i~~l~~~~~ 445 (450)
T COG0403 386 FD-HFFDTFTVRVPE-EVAEALLAAAIAGGINLRRVDA----DTVLIALTETTTKEDIDALVAAFG 445 (450)
T ss_pred cc-cceeeEEEecch-hHHHHHHHHHHhcCCceeeecC----CceEEEeecccCHHHHHHHHHHHh
Confidence 33 444 4466652 3455666666678999887663 35556654 3555666666654
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.65 E-value=9.3e-06 Score=75.85 Aligned_cols=306 Identities=14% Similarity=0.112 Sum_probs=178.8
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEe-CCHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDP--ESRRLRAALAKDSGLESD-HILVG-CGADELID 160 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~-~G~~~al~ 160 (422)
+.+|+.| |-..+++|++...+ + . ..|+-... -..+.++.+.++++++.+ .|++. .|++...+
T Consensus 6 ~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence 3566664 34446777766654 2 1 11332111 145677888889999655 56555 46788888
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHH-HHHHHcCC--EEEEec-CCCCC--CCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKSDF--SLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~--~~~~v~-~~~~~--~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
++...|+.+...-.+....|.... ..++..+- ++.... .+.++ -++++... +. ++...|++|+.+.-+|+-
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-DNDAYVHFCWNETISGVE 160 (365)
T ss_pred HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC-CCccEEEEecCCcccceE
Confidence 888888876532134444564322 23344443 222222 12222 23343332 32 334558889888889998
Q ss_pred CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-----
Q 014594 235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----- 309 (422)
Q Consensus 235 ~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----- 309 (422)
++ +...+.. +.++|+|..-.-+...-. + ..-.++..|..|.+|..| ++.++.++++++++....
T Consensus 161 v~--~~p~~~~-~~~~v~D~SS~ilsr~iD----v--sk~dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if 229 (365)
T COG1932 161 VP--ELPDIGS-DGLLVADASSAILSRPID----V--SKYDVIYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIF 229 (365)
T ss_pred cc--CCCCCCC-CceEEEecccHHhcCCCC----h--hHcceEEEehhhccCccc--eEEEEEcHHHHhcccccCCchHh
Confidence 87 1111111 388999977554432211 1 122367778999999888 888999999999886541
Q ss_pred ---------CCCC-CcHHHHHHHH---HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cC--CCceEEEEEeCC
Q 014594 310 ---------QPYN-VSVAAEVAAC---AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YP--SYSNFILCEVTS 371 (422)
Q Consensus 310 ---------~~~~-~~~~~~~aa~---~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p--~~~~f~~~~~~~ 371 (422)
..|+ ++.++.+... .++...+.++ +.++-+++.+.|.+.+.+-++... .+ ..-+-+.+++.+
T Consensus 230 ~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~ 309 (365)
T COG1932 230 DYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD 309 (365)
T ss_pred hchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc
Confidence 1233 3444444433 3333444555 777888889999999988776542 22 122456677764
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
..-...|...+.++|+..--|. ...+.+|+|+.. .++.+.|...++.
T Consensus 310 ~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~ 359 (365)
T COG1932 310 AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDW 359 (365)
T ss_pred HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHH
Confidence 3344667777777877766653 234459999753 4556667666654
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.56 E-value=7.1e-05 Score=69.55 Aligned_cols=289 Identities=17% Similarity=0.185 Sum_probs=179.6
Q ss_pred CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC-----CCEEEEcCCCch-hHHHHHHHcCCEEEEe
Q 014594 125 IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP-----GDKIVDCPPTFT-MYEFDAAVNGAAVVKV 197 (422)
Q Consensus 125 ~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~-----gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v 197 (422)
.| +..++..|++++.+.+|. +.++.|.-+..|=+++...++++ |.+..+++..|. ......+..|+.++.+
T Consensus 74 AYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~ 151 (471)
T COG3033 74 AYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNV 151 (471)
T ss_pred hhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccc
Confidence 45 455788999999999996 57888887777777777766654 444455556554 4445556688888777
Q ss_pred cCCC----------CCCCCHHHHHHHhhc---CCCeEEEEe-CCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCc-c
Q 014594 198 PRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEAYT-E 258 (422)
Q Consensus 198 ~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~-~ 258 (422)
+.++ ...+|+++|++.|.+ ++...|+++ ..|.-.|+..+.+-+++..+ . ++.++.|.+-- +
T Consensus 152 ~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaE 231 (471)
T COG3033 152 YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAE 231 (471)
T ss_pred cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence 6321 135899999999975 455677776 67778899998887777654 3 99999997632 1
Q ss_pred ---cc------CCCchhhhhh----cCCcEEEEccChhhhccccccceeeecCHH----HHHHHHHhcC------C-CCC
Q 014594 259 ---FS------GLESRMEWVK----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----IIEYLWRAKQ------P-YNV 314 (422)
Q Consensus 259 ---~~------~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~----~~~~l~~~~~------~-~~~ 314 (422)
|. +.+..+..+. .+.. -.+.|.-|. |+..+ .|++..+.+ +...++...- . .++
T Consensus 232 NaYFIk~rE~gYrd~sI~~IarEm~sYaD-~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl 308 (471)
T COG3033 232 NAYFIKQREPGYRDWSIEEIAREMYSYAD-GCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGL 308 (471)
T ss_pred hhhhhhhcCcccccccHHHHHHHHHhhhh-hheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcc
Confidence 11 1111111110 1222 233455564 33221 266776554 4555543321 1 245
Q ss_pred cHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--------CCCCHHHHHHHHH
Q 014594 315 SVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDLA 383 (422)
Q Consensus 315 ~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~--------~~~~~~~~~~~L~ 383 (422)
+.-...+....|.+ .+|++ .+ ....++|.+.|.+.|.-.+.|.+|.=++++.. +...++.|+-.|.
T Consensus 309 ~GrdmealAvGL~e~~~~~yl~--~R-v~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely 385 (471)
T COG3033 309 AGRDMEALAVGLREGVNFDYLA--HR-VAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELY 385 (471)
T ss_pred cchhHHHHHHHHHHhcCcHHHH--HH-HHHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHH
Confidence 55556666666654 35554 22 24467888999988743456777766666542 1245777877776
Q ss_pred -hCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594 384 -KMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLMHL 421 (422)
Q Consensus 384 -~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~~l 421 (422)
+.||.....+. +..-..+|+++. +.+.+|.+.++++++
T Consensus 386 ~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l 441 (471)
T COG3033 386 KEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKAL 441 (471)
T ss_pred HHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHH
Confidence 88988864322 111257999975 467788888888775
No 385
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.41 E-value=3e-07 Score=86.56 Aligned_cols=213 Identities=18% Similarity=0.138 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch------hHHHHHHHcCCEEEEecCCCCCC
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT------MYEFDAAVNGAAVVKVPRKSDFS 204 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~ 204 (422)
+..+.+.++...|. +..+++|+...|+.+++..++. |.+|+++...-. ......+..|++++.|-..+ .
T Consensus 49 ~~~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~ 123 (367)
T PF03841_consen 49 YAHVEELLCELTGA--EAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--R 123 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc--cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc--c
Confidence 35677777777774 5677888888899888887764 667777664332 24456667899999887432 3
Q ss_pred CCHHHHHHHhhcCCCeEEEEeCCCCccCc----CCCHHHHHHHHcC-CCeEEEccCCcccc--------CCCchhhhhhc
Q 014594 205 LNVELIADAVEREKPKCIFLTSPNNPDGS----IINDEDLLKILEM-PILVVLDEAYTEFS--------GLESRMEWVKK 271 (422)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~----~~~~e~l~~i~~~-~~~li~Deay~~~~--------~~~~~~~~~~~ 271 (422)
-.+++++++|+ ++|.+|+-.|++|-.-. ..+.+++.+|++. ++++++|-.-..+. ..+.....+ .
T Consensus 124 t~~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-~ 201 (367)
T PF03841_consen 124 THLSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-A 201 (367)
T ss_dssp --------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-C
T ss_pred ccccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-h
Confidence 45788999998 78999988888886322 4588999999987 99999997753221 112222222 3
Q ss_pred CCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccC-----C--------hHHH-HH
Q 014594 272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN-----P--------IYLE-VK 335 (422)
Q Consensus 272 ~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~-----~--------~~~~-~~ 335 (422)
.+.++++.|-.|.+| |-..|.+++.+++++++++. .+.+-+......++.+.|+. . ..+. ..
T Consensus 202 ~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~ 279 (367)
T PF03841_consen 202 AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSL 279 (367)
T ss_dssp CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------------
T ss_pred cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence 455688889999876 44589999999999998754 33455666665555555541 1 1122 44
Q ss_pred HHHHHHHHHHHHHHccC
Q 014594 336 EALIKERERLFKLLKDV 352 (422)
Q Consensus 336 ~~~~~~~~~l~~~L~~~ 352 (422)
+.++++.+.+...|+..
T Consensus 280 ~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 280 EELRARAERLAAQLKAA 296 (367)
T ss_dssp -----------------
T ss_pred ccccccccccccccccc
Confidence 56667777777777654
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.39 E-value=0.00011 Score=69.64 Aligned_cols=288 Identities=16% Similarity=0.132 Sum_probs=172.1
Q ss_pred HHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcC--C-----C-----CEEE-EcCCCchhHHHHHHHcC---CEE
Q 014594 133 RLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLD--P-----G-----DKIV-DCPPTFTMYEFDAAVNG---AAV 194 (422)
Q Consensus 133 ~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~--~-----g-----d~Vl-~~~p~y~~~~~~~~~~g---~~~ 194 (422)
++-..+.+..|.+. |.|+.-.|+.+.+..+..+-.+ | | +-|+ +++-+|.+....+...| -.+
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 44445555556654 4555545555555544433211 1 2 3333 56667888888888888 578
Q ss_pred EEecCCCCCCCCHHHHHHHhhcCCCe----EEE-EeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chhh
Q 014594 195 VKVPRKSDFSLNVELIADAVEREKPK----CIF-LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRME 267 (422)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~i~~~~~~----~i~-l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~~ 267 (422)
+.|+.+....+++++||+.|.+.+.+ +++ .+.-....|..-|++.+.++|+. ++|+.+|.+|....--. ....
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 88998888899999999998543333 232 23456788999999999999988 99999999998632111 1111
Q ss_pred hh-hcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcC--------CCCCcH---------------HHHHHH
Q 014594 268 WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQ--------PYNVSV---------------AAEVAA 322 (422)
Q Consensus 268 ~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~--------~~~~~~---------------~~~~aa 322 (422)
.+ ......-+..+.+|..| +.+..+..+.+.+ ++++..+... .|.+|. +-.-..
T Consensus 305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm 383 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM 383 (510)
T ss_pred hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence 11 11111134556789887 6677887776543 5555443322 122211 111111
Q ss_pred HHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-c---cCCCceEEEEEeCCCC---------------CHHHHHHHHH
Q 014594 323 CAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-P---YPSYSNFILCEVTSGM---------------DAKKLKDDLA 383 (422)
Q Consensus 323 ~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~---~p~~~~f~~~~~~~~~---------------~~~~~~~~L~ 383 (422)
..+=....+...+++.-++.+++.+.|++-+... + .|+..++.+..+|+.. -+-.+...+.
T Consensus 384 wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm 463 (510)
T KOG0629|consen 384 WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM 463 (510)
T ss_pred HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH
Confidence 1111112333378888999999999999876432 2 2444666655555211 1223456666
Q ss_pred hCCcEEEeCCC-CCCCCeEEEEecC----hhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNN-KELKGYVRVSVGK----PEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~-~~~~~~iRis~~~----~~~~~~l~~al~~l 421 (422)
++|-....+.. ...++++|+.++. ..+++-+.+-|+++
T Consensus 464 ~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 464 KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 88877776665 4457899998864 34567777777665
No 387
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.30 E-value=0.00065 Score=72.21 Aligned_cols=295 Identities=15% Similarity=0.088 Sum_probs=173.4
Q ss_pred EcCCCCCCCCCCHHHHHHHhc-CCCCCCC-C---C--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 99 KIDANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~---~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
.++.|.-+.-.|+.+.+.+.+ -..-..| | + .| .-++...++++.|.+..|--+-.|++.+-+.++.+..
T Consensus 83 fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~ 162 (954)
T PRK12566 83 LIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKR 162 (954)
T ss_pred cccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHH
Confidence 344454444456666455544 3322333 3 2 12 2367888899999876666666676666554444331
Q ss_pred -C--CCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 168 -D--PGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 168 -~--~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
. +..+|+++.-.|+.+... ++..|.+++. +++++.+. .++-++++.+||. .|.+.+.+++
T Consensus 163 ~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~i 229 (954)
T PRK12566 163 VAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRPL 229 (954)
T ss_pred HhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC-CCEEEEEEECCCC-ceEEccHHHH
Confidence 2 246799999999876653 3346777764 23334444 4688898889975 8999998999
Q ss_pred HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh---hhhccccccceeeecCHHHHHHHH----------
Q 014594 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS---KRAGLAGLRVGYGAFPLSIIEYLW---------- 306 (422)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S---K~~~~~G~r~G~i~~~~~~~~~l~---------- 306 (422)
.++++. |.++| +.+.- +.. ..+....+++.+|++++-. =-+|..|-..||+.+.+++.+++-
T Consensus 230 ~~~~h~~gal~~-~~~d~-laL--~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~ 305 (954)
T PRK12566 230 IDQLHGQQALAC-VAADL-LSL--LVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDA 305 (954)
T ss_pred HHHHHHcCCEEE-EEeCH-HHH--hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecC
Confidence 888876 76644 32211 000 1122234566678777532 223334555788888887776542
Q ss_pred ------------------HhcCCCCC--cH-H-H-HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 307 ------------------RAKQPYNV--SV-A-A-EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 307 ------------------~~~~~~~~--~~-~-~-~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
+-+...+. +. + + .++...++..++.+. +.++...+..++.+.|.+.|+ .+.. ..
T Consensus 306 ~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~-~~~~-~~ 383 (954)
T PRK12566 306 RGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGI-KRLN-RH 383 (954)
T ss_pred CCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCC-cccc-CC
Confidence 11111111 11 1 1 222223343456566 778888899999999999664 3322 24
Q ss_pred eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHH
Q 014594 363 NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECL 418 (422)
Q Consensus 363 ~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al 418 (422)
+| +.+++ +.+++++.+...++||-++..+ ++.+.||+.. .++.+.|..++
T Consensus 384 fF~~~~v~~--~~~~~~~~~~a~~~~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f 438 (954)
T PRK12566 384 FFDTLTLEV--GGAQAAIIESAEAARINLRILG----RGRLGVSLDETCDEATVARLFDIF 438 (954)
T ss_pred ccceEEEEc--cCCHHHHHHHHHHCCCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHh
Confidence 44 33444 2257888888889999999875 3678888864 34444444444
No 388
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00012 Score=67.95 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=107.1
Q ss_pred HHHHHHHhhcC-----CCeEEEEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh----hhhhcC
Q 014594 207 VELIADAVERE-----KPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM----EWVKKH 272 (422)
Q Consensus 207 ~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~----~~~~~~ 272 (422)
++++|+.|.+. .+.+|++...+..-|.-. +.+.++.| ++. ++.+|+||++......+... ..++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 56677777542 345677666677666544 66555554 444 99999999998654333211 111222
Q ss_pred CcEEEEccChhhhccccccceeeecCHHHHH-HHHHhcCCCCCcHHHHHHHHHH---ccCChHHHHHHHHHHHHHHHHHH
Q 014594 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-YLWRAKQPYNVSVAAEVAACAA---LQNPIYLEVKEALIKERERLFKL 348 (422)
Q Consensus 273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~-~l~~~~~~~~~~~~~~~aa~~~---L~~~~~~~~~~~~~~~~~~l~~~ 348 (422)
.. +-+|||-|- .| ||.. +++++- .-.+.-..|...+.-...+.++ +++.+ +.+..+...+.|...
T Consensus 335 pD---~vTFSKK~q-~g---Gffh-~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~---Ll~n~~~vG~~l~~g 403 (484)
T KOG1405|consen 335 PD---VVTFSKKFQ-TG---GFFH-DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKRED---LLNNVAHVGKALLKG 403 (484)
T ss_pred cc---ceehhhhhh-cC---cccc-CcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHH
Confidence 22 337899885 54 5554 333332 1223334454443332223333 33333 333344445555555
Q ss_pred Hcc----CCCC-cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 349 LKD----VPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 349 L~~----~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
|.+ .|.. .-....|.|+.+++|.+.-.+.++..++-+|+-+-.|+ ...||+-.+
T Consensus 404 L~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg----~~siRfRPs 462 (484)
T KOG1405|consen 404 LLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCG----DKSIRFRPS 462 (484)
T ss_pred HHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccc----cceeeeccc
Confidence 543 3432 23567899999999987777889999999999988776 466777654
No 389
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.78 E-value=0.006 Score=58.46 Aligned_cols=276 Identities=16% Similarity=0.044 Sum_probs=145.3
Q ss_pred cCCC-CCCEEEeCCHHH-HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHh
Q 014594 142 SGLE-SDHILVGCGADE-LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV 214 (422)
Q Consensus 142 ~~~~-~~~i~~~~G~~~-al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i 214 (422)
.|+. ....++.+.+|. .+.+.+.++. ..++.|+.+.-.+-.....+..+|.+++.|+. ++....|.+.+++.+
T Consensus 69 ~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i 148 (389)
T PF05889_consen 69 AGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKI 148 (389)
T ss_dssp TTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHH
T ss_pred cCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHH
Confidence 4664 345666666553 3334444443 35688988877666666677789999999982 233456788888888
Q ss_pred hc--CCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCCccccCCCchhhhh----hcCCcEEEEccChhhhc
Q 014594 215 ER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 215 ~~--~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~~ 286 (422)
++ ....+.++++++---|...+ .+++.+||+. |+..|+-.||.--.. .....+ ....-.+++.|.-|.|-
T Consensus 149 ~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF~ 226 (389)
T PF05889_consen 149 EELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNFM 226 (389)
T ss_dssp HHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHHC
T ss_pred HHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCEE
Confidence 64 34567777888777788887 8899999987 999999999984211 111111 11233478999999995
Q ss_pred cccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHHHHHc----cCCCCc-cc
Q 014594 287 LAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQ--NPIYLEVKEALIKERERLFKLLK----DVPFLN-PY 358 (422)
Q Consensus 287 ~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~--~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~-~~ 358 (422)
-+...+.+.+ ++..+..+.+.-..-....+.......+|. ...|........+...++.+.|+ +.+... ..
T Consensus 227 -VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~ 305 (389)
T PF05889_consen 227 -VPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLET 305 (389)
T ss_dssp -EESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSS
T ss_pred -ecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Confidence 4433444444 566777776543221111222222333333 22443333333344444444443 333211 13
Q ss_pred CCCceEEEEEeCC-----CCCHHHHHHHHHhCCc---EEEeCCCCC--------CCCeEEEEe--c-ChhhHHHHHHHHh
Q 014594 359 PSYSNFILCEVTS-----GMDAKKLKDDLAKMGV---MIRHYNNKE--------LKGYVRVSV--G-KPEHTDALMECLM 419 (422)
Q Consensus 359 p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI---~v~~~~~~~--------~~~~iRis~--~-~~~~~~~l~~al~ 419 (422)
|...--+.+.++. ..+.-.|...|..+|| .+....... ...|+-++- + +.+|+|.+.+.|+
T Consensus 306 p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~ 385 (389)
T PF05889_consen 306 PRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLD 385 (389)
T ss_dssp TT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHH
T ss_pred CCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4444444555542 1234577788887754 422211111 136888843 3 4555666666665
Q ss_pred h
Q 014594 420 H 420 (422)
Q Consensus 420 ~ 420 (422)
+
T Consensus 386 k 386 (389)
T PF05889_consen 386 K 386 (389)
T ss_dssp H
T ss_pred H
Confidence 4
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.71 E-value=0.0025 Score=58.21 Aligned_cols=165 Identities=15% Similarity=0.089 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCC---CEEEEcCCCch----hHHHHHHHcCCEE----EEec-
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAV----VKVP- 198 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~----~~v~- 198 (422)
.+..-..++...|...+.|.+.++-|-.+..++-.+.+|- -+|+++.-.|+ .+...++..|..+ +.+.
T Consensus 113 De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP 192 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP 192 (465)
T ss_pred chhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc
Confidence 4567788888999988999999999999999999998875 45888887775 4455666778753 3332
Q ss_pred CCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594 199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (422)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (422)
.+.+..+-.+++...|.+ +...+|+++..+--||+.++...|..-.+. |+++=.|-+|+.. . ..-.+-+++..
T Consensus 193 REGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg---N-VpL~LHdWgVD 268 (465)
T KOG3846|consen 193 REGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG---N-VPLQLHDWGVD 268 (465)
T ss_pred cccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc---C-CceEEeecCCc
Confidence 334446777888888764 346677778999999999999888866665 9999899888731 1 11122356666
Q ss_pred EEEccChhhhccccc-cceeeecCHH
Q 014594 276 IVLRTFSKRAGLAGL-RVGYGAFPLS 300 (422)
Q Consensus 276 i~~~S~SK~~~~~G~-r~G~i~~~~~ 300 (422)
+.+..--|-. .+|. .+|-+.+.+.
T Consensus 269 FACWCSYKYl-naGaGgIgGlFvHek 293 (465)
T KOG3846|consen 269 FACWCSYKYL-NAGAGGIGGLFVHEK 293 (465)
T ss_pred eEEEeeeccc-ccCCCccceeeeehh
Confidence 7777767743 3442 2554554443
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.60 E-value=0.0083 Score=60.20 Aligned_cols=280 Identities=15% Similarity=0.133 Sum_probs=147.7
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHH---HHHHHHHHHhcCCC----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCC
Q 014594 133 RLRAALAKDSGLESDHILVGCGAD---ELIDLIMRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~---~al~~~~~~l~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 205 (422)
+|++.+++.-|.+.-....-+|++ .++..+-..+...| ...+++...+......+.++|.++++|..+.+..+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 344444444465433333333432 23333333333344 23456777787777788889999999998888899
Q ss_pred CHHHHHHHhhc--CCCeEEEEeCCCCccCcC-CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 206 NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 206 d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
|..+|.+...+ ++-.++.++.|+. .|+. -..+++.++... |.-|..|.+-..-.- .+...++.+.++.=--+
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV---Glc~pGd~GaDV~HLNL 741 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV---GLCRPGDIGADVCHLNL 741 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCcccee---cccCCccccccceeecc
Confidence 99999988754 4567888888876 3433 345666666555 889999987542110 01111123333333346
Q ss_pred hhhhccc----cccceeeecCHHHHHHHHHhc------------------CCCCCcH-HHH-HHHHHHccCChHHHHHHH
Q 014594 282 SKRAGLA----GLRVGYGAFPLSIIEYLWRAK------------------QPYNVSV-AAE-VAACAALQNPIYLEVKEA 337 (422)
Q Consensus 282 SK~~~~~----G~r~G~i~~~~~~~~~l~~~~------------------~~~~~~~-~~~-~aa~~~L~~~~~~~~~~~ 337 (422)
.|.|++| |-.+|=+.+...+...+-... .||+.+. +.. .+-...+...+..+.-+.
T Consensus 742 HKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~ 821 (1001)
T KOG2040|consen 742 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKI 821 (1001)
T ss_pred cceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHH
Confidence 6776543 233444444444443332100 1222111 111 111122222222222223
Q ss_pred HHHHHHHHHHHHccCCCCcccCCCce----EEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014594 338 LIKERERLFKLLKDVPFLNPYPSYSN----FILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 408 (422)
Q Consensus 338 ~~~~~~~l~~~L~~~~~~~~~p~~~~----f~~~~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~ 408 (422)
..-+..++.++|+..=-+......+. |+ +++. .+.++.+++++|.++|.-.-.-++ ...+.+-|-....
T Consensus 822 AiLNaNYMakRLe~hYkil~~~~~~~vaHEFI-lD~r~fK~~agieavDvAKRL~DYgFHaPTmsw-PV~gtLMIEPTES 899 (1001)
T KOG2040|consen 822 AILNANYMAKRLESHYKILFRGENGLVAHEFI-LDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSW-PVAGTLMIEPTES 899 (1001)
T ss_pred HhhhhHHHHHHHhhccceeEecCCcceeeeee-eechhhccccCCcHHHHHHHHHhccCCCCcccc-ccCCceEeccCcc
Confidence 34466778888876421222222221 22 2332 367899999999999976544433 3456777776654
Q ss_pred hhHHHHHHHH
Q 014594 409 EHTDALMECL 418 (422)
Q Consensus 409 ~~~~~l~~al 418 (422)
++.+++++.+
T Consensus 900 E~k~ElDRfc 909 (1001)
T KOG2040|consen 900 EDKAELDRFC 909 (1001)
T ss_pred ccHHHHHHHH
Confidence 4444444433
No 392
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.062 Score=52.14 Aligned_cols=85 Identities=14% Similarity=0.214 Sum_probs=63.5
Q ss_pred EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe----EEEEeCCCCccCcC--CCHHHHHHHHcC
Q 014594 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK----CIFLTSPNNPDGSI--INDEDLLKILEM 246 (422)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~----~i~l~~p~NPtG~~--~~~e~l~~i~~~ 246 (422)
+.+++-++......+...|+++..++.+.+++++.+.|++++.++..+ .+++.+... ||.+ -.++++..+++.
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GT-T~~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGT-TSSCAFDELEELGPVCRE 263 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecC-ccccccccHHHhcchhhh
Confidence 456777888899999899999999998889999999999999753322 333333322 3332 356777777776
Q ss_pred -CCeEEEccCCcc
Q 014594 247 -PILVVLDEAYTE 258 (422)
Q Consensus 247 -~~~li~Deay~~ 258 (422)
|+|+.+|.+|++
T Consensus 264 ~glWLHVDAAYAG 276 (511)
T KOG0628|consen 264 EGLWLHVDAAYAG 276 (511)
T ss_pred cCEEEEeehhhcc
Confidence 999999999995
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.89 E-value=0.44 Score=48.41 Aligned_cols=263 Identities=16% Similarity=0.176 Sum_probs=144.6
Q ss_pred HHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCCCCCCHH
Q 014594 134 LRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVE 208 (422)
Q Consensus 134 lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~ 208 (422)
+...++++-|++-.+.-+---+|.+-+++..+. ..++.+.++...+|+-.....+ .+|++++.. |++
T Consensus 168 yQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~ 239 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIK 239 (1001)
T ss_pred hHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec--------CHH
Confidence 445566666776555443333344444333322 4566778888889975544433 234443322 233
Q ss_pred HHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc
Q 014594 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 287 (422)
+..... .+...+++..|.. .|.+.+.+++.++++. +.++++-.--..+ ..+......+.+|.++|-.. ||+
T Consensus 240 ~~~~s~--~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaL----tiLrpPgefGaDIavGSsQR-FGV 311 (1001)
T KOG2040|consen 240 EADYSS--KDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLAL----TILRPPGEFGADIAVGSSQR-FGV 311 (1001)
T ss_pred Hhhccc--cceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHH----HccCChhhcCceeeeccccc-cCc
Confidence 322222 3567788777776 8999999999999998 5554432111111 12222335566788888554 544
Q ss_pred c----cccceeeecCHHHHHHH---------------------HHh-------cCCCCCcH-----HHHHHHHHHccCCh
Q 014594 288 A----GLRVGYGAFPLSIIEYL---------------------WRA-------KQPYNVSV-----AAEVAACAALQNPI 330 (422)
Q Consensus 288 ~----G~r~G~i~~~~~~~~~l---------------------~~~-------~~~~~~~~-----~~~~aa~~~L~~~~ 330 (422)
| |-..||+.+.+++.+.+ +.. +...+.-+ ....|..+.+..+.
T Consensus 312 PlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~ 391 (1001)
T KOG2040|consen 312 PLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPH 391 (1001)
T ss_pred cccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcH
Confidence 3 22233333333332211 100 00111100 11223334444566
Q ss_pred HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---
Q 014594 331 YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--- 406 (422)
Q Consensus 331 ~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--- 406 (422)
.++ +.+++....-.|...|+..+.. +.. ..+|=.+++.-+.+.+++.+..++++|-++... ++.|-+++-
T Consensus 392 gL~~IArrvh~~T~~l~~~l~~aghe-l~~-k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~e----d~tigvslDETv 465 (1001)
T KOG2040|consen 392 GLKEIARRVHNLTLILAEGLKNAGHE-LQH-KPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVE----DGTIGVSLDETV 465 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchh-hcc-ccccceEEEEecCcHHHHHHHHHhhcCceEEee----cCceEEeecccc
Confidence 677 8888889999999999987632 222 225534444324578999999888889998876 467777774
Q ss_pred ChhhHHHHHHHH
Q 014594 407 KPEHTDALMECL 418 (422)
Q Consensus 407 ~~~~~~~l~~al 418 (422)
+.++.+.|...+
T Consensus 466 ~~~DvddLl~vf 477 (1001)
T KOG2040|consen 466 TEKDVDDLLWVF 477 (1001)
T ss_pred cHHHHHHHHHHH
Confidence 344455554443
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.38 E-value=0.52 Score=43.14 Aligned_cols=309 Identities=13% Similarity=0.093 Sum_probs=162.1
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHh-cC-CC----------CCCCCCcc--hHHHHHHHHHHcCCCCC-C-EEEeCCHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALG-QL-KF----------PYIYPDPE--SRRLRAALAKDSGLESD-H-ILVGCGADE 157 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~-~~-~~----------~~~y~~~~--~~~lr~~la~~~~~~~~-~-i~~~~G~~~ 157 (422)
++.+++|..|...+ |.+|+..++ ++ .+ .|+-.+.. ..+.+..+.++++++.+ . +++-.|++.
T Consensus 5 ~~~vvnFaaGPAkl--p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 5 PERVVNFAAGPAKL--PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred ccceeecCCCcccC--CHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 35578887765444 345543333 22 11 13322221 34566677788888543 3 456667777
Q ss_pred HHHHHHHHhc--CCC---CEEEEcCCCchhHHHHHHHcCCE-EEEecCCC-C--CCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 158 LIDLIMRCVL--DPG---DKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS-D--FSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 158 al~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~-~--~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
-+..+...++ +.| |-|+.-.-+--.+..+ +..|.. .+..+..+ . --.|.+.++. .++.+.++.|...
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~---~~da~yvyyCaNE 158 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL---NPDASYVYYCANE 158 (370)
T ss_pred cccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc---CCCccEEEEecCc
Confidence 7777777776 444 4455443222344444 334433 33333211 1 1244444433 2456789999777
Q ss_pred CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594 229 NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~ 307 (422)
...|+-++.-- +-.- +.++|.|-.-- |...+-. -....+++.+..|.+|.+|+ -.++.+++++.....
T Consensus 159 TVHGVEf~~~P---~~~~~~~vlVaDmSSn-flSrpvD-----vsk~gvi~aGAQKN~G~aG~--Tvvivr~dllg~~~~ 227 (370)
T KOG2790|consen 159 TVHGVEFDFIP---VNDPKGAVLVADMSSN-FLSRPVD-----VSKFGVIFAGAQKNVGPAGV--TVVIVRKDLLGNALD 227 (370)
T ss_pred eeeceecCCCC---CCCCCCceEEEecccc-hhcCCcc-----chhcceEEeccccccCcccc--EEEEEehhhhccccc
Confidence 77787764322 1122 78889987643 3222211 12223778889999998884 447778888776543
Q ss_pred hcC-------------CCC-CcHHHHHH----HHHHccCChHHHHHHHHHHHHHHHHHHHccC-CCCc--ccCC--CceE
Q 014594 308 AKQ-------------PYN-VSVAAEVA----ACAALQNPIYLEVKEALIKERERLFKLLKDV-PFLN--PYPS--YSNF 364 (422)
Q Consensus 308 ~~~-------------~~~-~~~~~~~a----a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~--~~p~--~~~f 364 (422)
... .|+ ++.++.++ ....++.+....+.+.-.+..+.+.+.+.+. ++.. +.|. .-+-
T Consensus 228 ~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MN 307 (370)
T KOG2790|consen 228 ITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMN 307 (370)
T ss_pred CCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcc
Confidence 321 122 23233222 2233333333336666677788899999875 4332 1221 2245
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 365 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 365 ~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+.+++.+..-.++|.....+++..-.-|. .--|.||-|+- +.++.+.|...++.+
T Consensus 308 V~Fri~~d~Le~eFLkeA~~~~mv~LKGh--RSVGGiRASlYNAisv~~~q~L~~~m~~F 365 (370)
T KOG2790|consen 308 VPFRIEKDELEAEFLKEAAKEHMVQLKGH--RSVGGIRASLYNAISVEEVQKLAAFMKEF 365 (370)
T ss_pred cceeecchHHHHHHHHHHHHhhhhccccc--cccccchhhhhccccHHHHHHHHHHHHHH
Confidence 66676433234455555544443222221 22467898863 344556666666543
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=91.92 E-value=1.7 Score=39.36 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=81.2
Q ss_pred HHHHHHHHhc--CCCCE-EEEcCCCchhHHHHHHHcCCEEEEec--C-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 158 LIDLIMRCVL--DPGDK-IVDCPPTFTMYEFDAAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 158 al~~~~~~l~--~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~v~--~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
.+.+.+..+. +|..+ |+-..-.--......-.+|.+++.+. . .+..--|++.+++.+++-+..+|+..+-. |
T Consensus 88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~st--t 165 (432)
T KOG3843|consen 88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHST--T 165 (432)
T ss_pred cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeec--c
Confidence 4555555553 34433 44333222222223334788888776 2 23345689999999987677766543322 2
Q ss_pred CcCC-----CHHHHHHHHcC-CCeEEEccCCccccCCC-chhhhhhc-CCcEEEEccChhhhccccccceeee--cCHHH
Q 014594 232 GSII-----NDEDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGA--FPLSI 301 (422)
Q Consensus 232 G~~~-----~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~--~~~~~ 301 (422)
.... ..|++..|+.. ++.-|+..+|.--...- ..+..... .....++.|+-|.|..|= .|.++ .+..+
T Consensus 166 scfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~ 243 (432)
T KOG3843|consen 166 SCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNF 243 (432)
T ss_pred cccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHH
Confidence 2222 34566666655 88889999997322100 11111111 222357889999997652 23333 26778
Q ss_pred HHHHHHhcC
Q 014594 302 IEYLWRAKQ 310 (422)
Q Consensus 302 ~~~l~~~~~ 310 (422)
++.+.+...
T Consensus 244 iq~iak~yp 252 (432)
T KOG3843|consen 244 IQEIAKMYP 252 (432)
T ss_pred HHHHHHhCC
Confidence 887776543
No 396
>PLN02672 methionine S-methyltransferase
Probab=86.66 E-value=7.4 Score=43.21 Aligned_cols=168 Identities=17% Similarity=0.216 Sum_probs=97.5
Q ss_pred CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHh------cCCCCEEEEcCCCchhHHHHHHHcC---
Q 014594 127 PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCV------LDPGDKIVDCPPTFTMYEFDAAVNG--- 191 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~~~~g--- 191 (422)
|..|...+|..++.++ + +.+++|++-++-..|++.+++.+ ++.+.+-.++ +.| .......|
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ 499 (1082)
T PLN02672 424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKW---LTSLAIENATS 499 (1082)
T ss_pred CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHH---HhHhhhhcccc
Confidence 4458899999999885 3 57899999999999999999843 2222111111 122 11111122
Q ss_pred -------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCC-ccc
Q 014594 192 -------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAY-TEF 259 (422)
Q Consensus 192 -------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay-~~~ 259 (422)
++|+.-|. .- +.+.+.+++-++++++..-.. +-..+...++.|.+ . |.+++.|..- .++
T Consensus 500 ~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1082)
T PLN02672 500 DSKSDDVITVIEAPR----QS--DLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLEL 570 (1082)
T ss_pred cCccCCeEEEEeCCC----cc--hHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheee
Confidence 22333332 22 366677776788988865332 22233334444433 3 9999999863 334
Q ss_pred cCCCc---hhhhhh---cCCcEEEEccChhhhccccccceeeec-CHHHHHHHHH
Q 014594 260 SGLES---RMEWVK---KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWR 307 (422)
Q Consensus 260 ~~~~~---~~~~~~---~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~ 307 (422)
...++ .+..+. ...+..++.++-|.--.+.+.+.+++. +..+.+.+.+
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1082)
T PLN02672 571 SSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSK 625 (1082)
T ss_pred ccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHH
Confidence 33221 222221 234556667787775568899999886 4455555554
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=80.16 E-value=34 Score=30.50 Aligned_cols=154 Identities=19% Similarity=0.252 Sum_probs=88.7
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEE----E-c-CC-Cc-------hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIV----D-C-PP-TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl----~-~-~p-~y-------~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (422)
+.+-+|+.....++..++ +.|..|. + + ++ +| ......++..|..++.........-..++|.+++
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l 82 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEAL 82 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHH
Confidence 567788888877777654 4453331 1 1 12 12 2334566778999888886543445678888888
Q ss_pred hcCCCeEEEEeCCCCccCcCCCHHHHHH---HHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccc
Q 014594 215 EREKPKCIFLTSPNNPDGSIINDEDLLK---ILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLA 288 (422)
Q Consensus 215 ~~~~~~~i~l~~p~NPtG~~~~~e~l~~---i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~ 288 (422)
..-+...|+ +|.+++..+..+ +|+. |+.+ |.++...++ .+...-..+--+.+-+-+| .|++
T Consensus 83 ~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa-~gL~ 149 (223)
T COG2102 83 RRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRDPEELLEEMVEAGFEAIIVAVSA-EGLD 149 (223)
T ss_pred HhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCCHHHHHHHHHHcCCeEEEEEEec-cCCC
Confidence 766677888 899998877655 5655 7643 455554332 1211112222233334444 4444
Q ss_pred cccceeeecCHHHHHHHHHhcCCCCCcHH
Q 014594 289 GLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317 (422)
Q Consensus 289 G~r~G~i~~~~~~~~~l~~~~~~~~~~~~ 317 (422)
..=+|.- .+.+.++.+......|++++.
T Consensus 150 ~~~lGr~-i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 150 ESWLGRR-IDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred hHHhCCc-cCHHHHHHHHHHHHhcCCCcc
Confidence 3223332 377888888777665655543
No 398
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=73.13 E-value=1.4 Score=19.47 Aligned_cols=10 Identities=50% Similarity=0.610 Sum_probs=7.9
Q ss_pred ccccccCCCC
Q 014594 12 LCLLKSNFSS 21 (422)
Q Consensus 12 ~~~~~~~~~~ 21 (422)
|||.|+.+-|
T Consensus 3 l~wqksihgs 12 (12)
T PF08247_consen 3 LCWQKSIHGS 12 (12)
T ss_pred eeEeeeecCC
Confidence 7999988754
No 399
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=72.96 E-value=35 Score=31.77 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=50.6
Q ss_pred CCCCEEE-EcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 168 DPGDKIV-DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 168 ~~gd~Vl-~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
+.|-.|. +....-.......+..|..++.++.+.++.-|.+++.+.+.+.++.++++.+. -++.+....+...
T Consensus 29 ~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y------~~~~~~~~~~k~~ 102 (279)
T TIGR03590 29 AQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY------GLDADWEKLIKEF 102 (279)
T ss_pred HCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC------CCCHHHHHHHHHh
Confidence 4454443 33332222234556688888888755455567888888887678889988776 3455555555444
Q ss_pred -CCeEEEccC
Q 014594 247 -PILVVLDEA 255 (422)
Q Consensus 247 -~~~li~Dea 255 (422)
..++++|+-
T Consensus 103 ~~~l~~iDD~ 112 (279)
T TIGR03590 103 GRKILVIDDL 112 (279)
T ss_pred CCeEEEEecC
Confidence 345666664
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=64.31 E-value=73 Score=28.94 Aligned_cols=97 Identities=16% Similarity=0.103 Sum_probs=52.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..++.|- -|.+.+++.+++ .+.+.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI---TDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 4566666655555556666788888877765443333334444455555555432 245555554432 35666
Q ss_pred EEEeCC-CCccCcCCCHHHHHHHHcC
Q 014594 222 IFLTSP-NNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p-~NPtG~~~~~e~l~~i~~~ 246 (422)
++.+.. ..+.+...+.+++.+..+.
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~ 109 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDV 109 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhH
Confidence 664422 2233344566777776654
No 401
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=59.21 E-value=98 Score=30.63 Aligned_cols=100 Identities=24% Similarity=0.355 Sum_probs=62.8
Q ss_pred HHcC-CCCCCE-EEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc
Q 014594 140 KDSG-LESDHI-LVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216 (422)
Q Consensus 140 ~~~~-~~~~~i-~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 216 (422)
+.++ +...++ +++.| +-...+.+.|.+.| ..|.+.+-++......++..|++++. ++++...+.
T Consensus 171 ~~~~~L~~~~vlvIGAG--em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~----------l~el~~~l~- 237 (414)
T COG0373 171 RIFGSLKDKKVLVIGAG--EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA----------LEELLEALA- 237 (414)
T ss_pred HHhcccccCeEEEEccc--HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----------HHHHHHhhh-
Confidence 3455 444444 44444 44556778888888 88999999999888899988866554 455555554
Q ss_pred CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
..++|+.+ -+. .-.+.+.+.+++..+. .-++++|=+
T Consensus 238 -~~DvViss-Tsa-~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 238 -EADVVISS-TSA-PHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred -hCCEEEEe-cCC-CccccCHHHHHHHHhcccCeEEEEec
Confidence 34566544 111 2235666777776654 226777744
No 402
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.18 E-value=33 Score=32.11 Aligned_cols=140 Identities=14% Similarity=0.106 Sum_probs=71.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE-cCCCch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCC
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVD-CPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKP 219 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~-~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~ 219 (422)
+..+-+++|.|+...-..+..-+.+.|-++++ .-.... .+....+..| ++..+..|-...-++.++.+.+++ .+.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 44456788888877777777778888876543 333332 3333333345 555544332211223333344432 333
Q ss_pred eEEEEeCCC---CccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc
Q 014594 220 KCIFLTSPN---NPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 220 ~~i~l~~p~---NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 289 (422)
--|++||.. .-..--.+.+++++..+.|+.=...-... +-+.... ...++++.+.|..=.+|.+|
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~ka---FLP~M~~--~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKA---FLPKMLE--NNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHH---HhHHHHh--cCCceEEEehhhhcccCCcc
Confidence 445567653 22344468899998887654211111100 1111111 14577788887655566665
No 403
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=52.30 E-value=83 Score=27.97 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCCCEE-EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 155 ADELIDLIMRCVLDPGDKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 155 ~~~al~~~~~~l~~~gd~V-l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
|..+- .+++.|+..+-.| ++..+.-.......+..|++++..+. -|.+.|.++++ +...++++.+.+
T Consensus 8 G~~G~-~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-----~~~~~l~~al~--g~d~v~~~~~~~ 75 (233)
T PF05368_consen 8 GNQGR-SVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-----DDPESLVAALK--GVDAVFSVTPPS 75 (233)
T ss_dssp SHHHH-HHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-----T-HHHHHHHHT--TCSEEEEESSCS
T ss_pred cHHHH-HHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-----CCHHHHHHHHc--CCceEEeecCcc
Confidence 44443 3444455566444 34444422333344568999886653 27899999996 566777765543
No 404
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=51.97 E-value=1.9e+02 Score=26.52 Aligned_cols=60 Identities=10% Similarity=-0.023 Sum_probs=33.1
Q ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc--CcCCCHHHHHHHHc
Q 014594 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--GSIINDEDLLKILE 245 (422)
Q Consensus 185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G~~~~~e~l~~i~~ 245 (422)
...+.+++.++-.+...+-+-..++++.+.. -+..+|++..|.-|. ..+.+.+++.+.++
T Consensus 191 al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~el~~~l~ 252 (256)
T TIGR00715 191 ALLREYRIDAVVTKASGEQGGELEKVKAAEA-LGINVIRIARPQTIPGVAIFDDISQLNQFVA 252 (256)
T ss_pred HHHHHcCCCEEEEcCCCCccchHHHHHHHHH-cCCcEEEEeCCCCCCCCccCCCHHHHHHHHH
Confidence 3445566666655532222234566666554 567777777665443 34556666665543
No 405
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=50.99 E-value=19 Score=26.80 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=20.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
|.|.-.++++.||+.++++++.|++-
T Consensus 11 ~Tpsr~ei~~klA~~~~~~~~~ivv~ 36 (84)
T PF01282_consen 11 PTPSRKEIREKLAAMLNVDPDLIVVF 36 (84)
T ss_dssp SS--HHHHHHHHHHHHTSTGCCEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEe
Confidence 45667899999999999999988874
No 406
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=49.55 E-value=62 Score=33.57 Aligned_cols=102 Identities=16% Similarity=0.213 Sum_probs=61.7
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCH---HHHHHHhhcCCCeE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNV---ELIADAVEREKPKC 221 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~---~~l~~~i~~~~~~~ 221 (422)
-|+.|.||.++-..+.. ++.+| ..++.+|-=....+. .+..|...-.+. ..++. ..+...+.....++
T Consensus 37 vvmPTGgGKSlCyQiPA-ll~~G-~TLVVSPLiSLM~DQV~~l~~~Gi~A~~ln----S~l~~~e~~~v~~~l~~g~~kl 110 (590)
T COG0514 37 VVMPTGGGKSLCYQIPA-LLLEG-LTLVVSPLISLMKDQVDQLEAAGIRAAYLN----STLSREERQQVLNQLKSGQLKL 110 (590)
T ss_pred EEccCCCCcchHhhhHH-HhcCC-CEEEECchHHHHHHHHHHHHHcCceeehhh----cccCHHHHHHHHHHHhcCceeE
Confidence 46789999999888887 55577 455566666544443 344676665554 23443 34444444456888
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS 260 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~ 260 (422)
+|++ |. ...+..-+..|.+. -.++++||||.-..
T Consensus 111 Lyis-PE----rl~~~~f~~~L~~~~i~l~vIDEAHCiSq 145 (590)
T COG0514 111 LYIS-PE----RLMSPRFLELLKRLPISLVAIDEAHCISQ 145 (590)
T ss_pred EEEC-ch----hhcChHHHHHHHhCCCceEEechHHHHhh
Confidence 8876 32 11222444555554 56799999996433
No 407
>PRK06500 short chain dehydrogenase; Provisional
Probab=44.29 E-value=2.3e+02 Score=25.12 Aligned_cols=97 Identities=10% Similarity=0.066 Sum_probs=49.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH---hhc--CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA---VER--EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---i~~--~~~~~ 221 (422)
..+++|.++...-..+.+.+.+.|..|++....-.......+..|.++..+..+- .|.+++.+. +.+ .+.+.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA---GDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 3566666655555566666788887777655433333333334466665555332 234444333 221 35666
Q ss_pred EEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++-+......+ ..++.+++.+..+.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNT 110 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66553221112 13455666665553
No 408
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=43.86 E-value=1.1e+02 Score=29.36 Aligned_cols=70 Identities=24% Similarity=0.300 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCc-hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC
Q 014594 169 PGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 169 ~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~ 246 (422)
++.+|++.+... ..........|+++.-||. ..+.+++.+ .+++.|+|+ .|-+|.-.....+.++++...
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~----~t~~eeIl~----~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~ 249 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPA----DTSAEEILA----LNPDGIFLSNGPGDPAPLDYAIETIKELLGT 249 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcC----CCCHHHHHh----hCCCEEEEeCCCCChhHHHHHHHHHHHHhcc
Confidence 445677666544 2444555557999999985 345666544 567899998 789997777777778887765
No 409
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=43.70 E-value=1.9e+02 Score=25.97 Aligned_cols=108 Identities=14% Similarity=0.027 Sum_probs=54.1
Q ss_pred HHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH
Q 014594 136 AALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (422)
Q Consensus 136 ~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 213 (422)
+....++......+++|.++...=..+.+.|.+.|..|++..-.-. .........+.++..++.+- -|.+.+++.
T Consensus 5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~i~~~ 81 (258)
T PRK06935 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDL---TKPESAEKV 81 (258)
T ss_pred hhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHH
Confidence 3344445555556777777666666667778888977765543321 11122222455555555332 234555444
Q ss_pred hhc-----CCCeEEEEeCC-CCccC-cCCCHHHHHHHHcC
Q 014594 214 VER-----EKPKCIFLTSP-NNPDG-SIINDEDLLKILEM 246 (422)
Q Consensus 214 i~~-----~~~~~i~l~~p-~NPtG-~~~~~e~l~~i~~~ 246 (422)
+.+ .+.+.++.+.. ..+.. ...+.+++++..+.
T Consensus 82 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 121 (258)
T PRK06935 82 VKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDI 121 (258)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 431 25677765522 11111 12345566665543
No 410
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=42.94 E-value=54 Score=27.07 Aligned_cols=53 Identities=19% Similarity=0.193 Sum_probs=40.9
Q ss_pred CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH-HHHHHHcC-----CC-eEEEccCCc
Q 014594 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKILEM-----PI-LVVLDEAYT 257 (422)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e-~l~~i~~~-----~~-~li~Deay~ 257 (422)
.|.+.+.+.+.+.++..|++--|.|+.|...+.. ..+++++. ++ +++.||-.+
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 5899999999888999999999999999998854 24445543 44 466888654
No 411
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=42.91 E-value=2.2e+02 Score=27.01 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=50.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC-C-EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPG-D-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~g-d-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
..|+..+++..+..++..+-. .| + .|+++...-.......+.+|++++.++.+ +.-+...+.+.+.+..+...++
T Consensus 52 ~~vv~aSsGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 128 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAARK-LGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV--WWEADNYLREELAENDPGPVYV 128 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc--hHHHHHHHHHHHHhccCCcEEe
Confidence 457777777777766665432 23 2 34444443345566777899999998732 1111223344444333355665
Q ss_pred eCCCCccCcCCCHHHHHHHHc
Q 014594 225 TSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~ 245 (422)
..-+||.+..--..--.||.+
T Consensus 129 ~~~~n~~~~~g~~t~~~Ei~~ 149 (316)
T cd06448 129 HPFDDPLIWEGHSSMVDEIAQ 149 (316)
T ss_pred CCCCCchhhccccHHHHHHHH
Confidence 533455543332223344444
No 412
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=42.30 E-value=1e+02 Score=27.59 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=42.4
Q ss_pred CEEEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHH-----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC
Q 014594 148 HILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~ 218 (422)
-|++|+|.+......-... +.++|.++ ..|-|+.+.. ..-..|+.++..+ .+|++.+.+.+++.+
T Consensus 154 ~l~yTsg~~~~~~~~~~~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-----rFd~~~~l~~i~~~~ 225 (227)
T TIGR03089 154 LVAGGGEWTGAELVAAARAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-----HPDPARLDQIAETER 225 (227)
T ss_pred eeeccccccHHHHHHHHhhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-----CCCHHHHHHHHHhhc
Confidence 5678877664433222211 56789999 8888864432 2233788988875 568899988887554
No 413
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=41.64 E-value=1.3e+02 Score=28.53 Aligned_cols=105 Identities=21% Similarity=0.269 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCH---------HHHHHHHHHHh---cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 132 RRLRAALAKDSGLESDHILVGCGA---------DELIDLIMRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i~~~~G~---------~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
...++.|-+.||.+.++|++-.-. -..+..+++-| +++||..++--..| |-+.-...-
T Consensus 88 ~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~LvfHYSGH----------Gtr~~~~~g 157 (362)
T KOG1546|consen 88 HRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLVFHYSGH----------GTRQPDTNG 157 (362)
T ss_pred HHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEEEEecCC----------CCcCCCCCC
Confidence 467777888889888877654321 12344444444 56788655432222 322222222
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-----CCeEEEccCCcccc
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFS 260 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-----~~~li~Deay~~~~ 260 (422)
++..+.| ..|+ --=+|-.|.+++.|..+.+++- .+..|+|..|+...
T Consensus 158 De~dG~D-------------E~I~-P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgl 209 (362)
T KOG1546|consen 158 DEVDGYD-------------ETIV-PCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGL 209 (362)
T ss_pred CCCCCCc-------------ceee-cccccccccccchHHHHHHHhccCCCceEEEEeecccCCCc
Confidence 2222222 1344 1125667888888888888874 46788888887543
No 414
>PRK08589 short chain dehydrogenase; Validated
Probab=40.20 E-value=2.6e+02 Score=25.46 Aligned_cols=96 Identities=8% Similarity=0.062 Sum_probs=48.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++.... ....... +..+.++..+..|- -|.+.+++.+.+ .+
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDI---SDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeec---CCHHHHHHHHHHHHHHcCC
Confidence 356666665555555566688889888776554 3332222 22355555555332 234444443321 34
Q ss_pred CeEEEEeCCCC-ccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNN-PDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~N-PtG~--~~~~e~l~~i~~~ 246 (422)
.+.++.+.... +.+. ..+.+++.+..+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 113 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAV 113 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 56665442221 2222 3356666665553
No 415
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=38.99 E-value=2.4e+02 Score=25.30 Aligned_cols=85 Identities=13% Similarity=0.144 Sum_probs=48.7
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcC
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE 217 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~ 217 (422)
+|+. .++...+..+++...+.....+|.+|++....-. ......+..|+.+..+.. ...-..+.+.+.+.+.+.
T Consensus 92 ~G~~--~~~~~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~ 169 (240)
T PRK09189 92 LGFR--HVIEGGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGGA 169 (240)
T ss_pred cCCC--CCcCCCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhcC
Confidence 4554 2344455555554444433346778887766543 344555667888766651 111123456666777656
Q ss_pred CCeEEEEeCCC
Q 014594 218 KPKCIFLTSPN 228 (422)
Q Consensus 218 ~~~~i~l~~p~ 228 (422)
+..+|++.+|.
T Consensus 170 ~~d~i~f~S~~ 180 (240)
T PRK09189 170 PFDAVLLYSRV 180 (240)
T ss_pred CCCEEEEeCHH
Confidence 77888877765
No 416
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=38.24 E-value=1.6e+02 Score=28.80 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=48.0
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
.|+-.+++..++.++..+- ..| -.|+++...-..-....+.+|++++.++...+..-..+..++..+ .++..++++
T Consensus 113 ~vV~aSsGN~G~alA~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~-~~~~~~~~~ 190 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLE-STPDAFMLQ 190 (368)
T ss_pred EEEEeCCchHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHH-hcCCCCccC
Confidence 5777778888877776653 224 234444444455566778899999998743222223444444444 344556655
Q ss_pred CCCCccC
Q 014594 226 SPNNPDG 232 (422)
Q Consensus 226 ~p~NPtG 232 (422)
.-+||.+
T Consensus 191 q~~np~~ 197 (368)
T PLN02556 191 QFSNPAN 197 (368)
T ss_pred CCCCHHH
Confidence 4456643
No 417
>PRK05872 short chain dehydrogenase; Provisional
Probab=38.15 E-value=3.3e+02 Score=25.21 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=51.6
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc--CCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
...+++|.|+...-..+.+.+.+.|.+|++..-.-.......+.. +.++..+..| --|.+.+++.+.+ .+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD---VTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEec---CCCHHHHHHHHHHHHHHcCC
Confidence 346777766665555566667888888877665444433333333 3455554432 2255555555432 35
Q ss_pred CeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.++++.+.-....+. ..+.+++.+..+.
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~v 115 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDV 115 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHH
Confidence 666664422222222 2356666665543
No 418
>PRK06139 short chain dehydrogenase; Provisional
Probab=37.46 E-value=2.8e+02 Score=26.41 Aligned_cols=96 Identities=9% Similarity=0.109 Sum_probs=47.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.++...=..+.+.+.+.|.+|++..-.-..... .++..|.++..++.|- -|.+++++.+++ .+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDV---TDADQVKALATQAASFGGR 84 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC---CCHHHHHHHHHHHHHhcCC
Confidence 345555554444444555677888887765543332222 2233566666555432 245666555432 34
Q ss_pred CeEEEEeCCCCccCcC--CCHHHHHHHHc
Q 014594 219 PKCIFLTSPNNPDGSI--INDEDLLKILE 245 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~--~~~e~l~~i~~ 245 (422)
...++-+.-....|.. .+.++++++.+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 6666644322222322 24555555444
No 419
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=37.39 E-value=1.2e+02 Score=28.65 Aligned_cols=71 Identities=17% Similarity=0.128 Sum_probs=45.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
.|++|.|+--.-...+..|++.|-.|++.+.--.+........-++.+.-+ -.|-+.|.+.+.+.++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gD-----i~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGD-----LLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEec-----cccHHHHHHHHHhcCCCEEE
Confidence 478888887777777777888996665554444333333322113343332 45778888888877777665
No 420
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=37.36 E-value=3.1e+02 Score=24.64 Aligned_cols=93 Identities=11% Similarity=0.123 Sum_probs=57.1
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEE----cCC--C--c-----hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIVD----CPP--T--F-----TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl~----~~p--~--y-----~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (422)
++..+||......+.++..+ -+.+.+ +.. . | ......++..|..++.++......--.+++.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 45678888888888776655 443322 111 1 1 23345677789998876643222223677777776
Q ss_pred cCCCeEEEEeCCCCccCcCCCHHHHHH---HHcC-CCe
Q 014594 216 REKPKCIFLTSPNNPDGSIINDEDLLK---ILEM-PIL 249 (422)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~e~l~~---i~~~-~~~ 249 (422)
+.+...++ +|.+....+... +|+. |+.
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~ 113 (223)
T TIGR00290 83 TLDVEAVV-------FGAIYSEYQKTRIERVCRELGLK 113 (223)
T ss_pred HcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCE
Confidence 55777887 899988765544 4443 664
No 421
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=37.11 E-value=2.4e+02 Score=26.66 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=53.9
Q ss_pred CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-Cc-hhHHHHHHHcCCEEEEecCCCCCCC-CHHHHHHHhhcCCC
Q 014594 144 LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TF-TMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKP 219 (422)
Q Consensus 144 ~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y-~~~~~~~~~~g~~~~~v~~~~~~~~-d~~~l~~~i~~~~~ 219 (422)
+.+. .|+=.+++.-++.+++-+-. .|-++++.-| +. .......+.+|++++.+|..+++.. -.+.+++... ..+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~-~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA-EIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH-hCC
Confidence 4444 55555556667666655432 3544433333 44 4667788889999999996333211 1333333444 344
Q ss_pred e-EEEEe---CCCCccCcCC-CHHHHHHH
Q 014594 220 K-CIFLT---SPNNPDGSII-NDEDLLKI 243 (422)
Q Consensus 220 ~-~i~l~---~p~NPtG~~~-~~e~l~~i 243 (422)
. +++++ ||.||-.... +-.||.+-
T Consensus 137 ~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~ 165 (300)
T COG0031 137 GYAVWLNQFENPANPEAHYETTGPEIWQQ 165 (300)
T ss_pred CceEchhhcCCCccHHHHHhhhHHHHHHH
Confidence 4 77764 7777766653 33444443
No 422
>COG2004 RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]
Probab=37.10 E-value=45 Score=26.01 Aligned_cols=27 Identities=26% Similarity=0.522 Sum_probs=22.7
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGC 153 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~ 153 (422)
|+|.-.++|+.||+.++.+.+.|++-.
T Consensus 30 ~TPSr~evrekla~~l~~d~e~VvV~~ 56 (107)
T COG2004 30 PTPSRKEVREKLAAMLGADKELVVVDY 56 (107)
T ss_pred CCCCHHHHHHHHHHHHCCCcceEEEEe
Confidence 556678999999999999988888743
No 423
>PLN02591 tryptophan synthase
Probab=37.02 E-value=3.3e+02 Score=24.91 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCch---hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 158 al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++..+..+.+.| |.|++++--+. .+...++.+|...+.+-.. ..+.+.+++... .....||+.+-...||.
T Consensus 94 G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P---tt~~~ri~~ia~-~~~gFIY~Vs~~GvTG~ 169 (250)
T PLN02591 94 GIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP---TTPTERMKAIAE-ASEGFVYLVSSTGVTGA 169 (250)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC---CCCHHHHHHHHH-hCCCcEEEeeCCCCcCC
Confidence 5555566555555 77888776664 4445556677776665421 233455555554 45667777666666776
Q ss_pred C
Q 014594 234 I 234 (422)
Q Consensus 234 ~ 234 (422)
-
T Consensus 170 ~ 170 (250)
T PLN02591 170 R 170 (250)
T ss_pred C
Confidence 3
No 424
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=36.58 E-value=17 Score=31.26 Aligned_cols=116 Identities=14% Similarity=0.131 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHhcCCCC-EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 153 CGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
.|=+.++.+++..+...|. .|++..|.........+........+.... +... ....... ...++.+
T Consensus 8 RGKSa~lGl~~a~l~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~~~------~~~~-----~~~~~~~-~~~~~~~ 75 (177)
T PF05127_consen 8 RGKSAALGLAAAALIQKGKIRILVTAPSPENVQTLFEFAEKGLKALGYKE------EKKK-----RIGQIIK-LRFNKQR 75 (177)
T ss_dssp SSHHHHHHHCCCCSSS-----EEEE-SS--S-HHHHHCC--------------------------------------CCC
T ss_pred CCHHHHHHHHHHHHHHhcCceEEEecCCHHHHHHHHHHHHhhcccccccc------cccc-----ccccccc-cccccce
Confidence 4667788887777777764 799999999877777665443332222111 0000 0111111 1122334
Q ss_pred CcCCCHHHHHHHHcCCCeEEEccCCccccCCCchh-hhhhcCCcEEEEccChh
Q 014594 232 GSIINDEDLLKILEMPILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSK 283 (422)
Q Consensus 232 G~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~-~~~~~~~~~i~~~S~SK 283 (422)
=..++++++.......-++|+|||=+- ..+.+ ..+..+.++++..|.+-
T Consensus 76 i~f~~Pd~l~~~~~~~DlliVDEAAaI---p~p~L~~ll~~~~~vv~stTi~G 125 (177)
T PF05127_consen 76 IEFVAPDELLAEKPQADLLIVDEAAAI---PLPLLKQLLRRFPRVVFSTTIHG 125 (177)
T ss_dssp --B--HHHHCCT----SCEEECTGGGS----HHHHHHHHCCSSEEEEEEEBSS
T ss_pred EEEECCHHHHhCcCCCCEEEEechhcC---CHHHHHHHHhhCCEEEEEeeccc
Confidence 455666666655544568999998541 11222 23345677766555444
No 425
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=36.34 E-value=3.4e+02 Score=24.81 Aligned_cols=111 Identities=23% Similarity=0.203 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH-HHh--------c-----C---CCCEEEEcCCCc-h-hHHHHHHHcCCE
Q 014594 133 RLRAALAKDSGLESDHILVGCGADELIDLIM-RCV--------L-----D---PGDKIVDCPPTF-T-MYEFDAAVNGAA 193 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~-~~l--------~-----~---~gd~Vl~~~p~y-~-~~~~~~~~~g~~ 193 (422)
.+.+++...-.....+|++|.|+.+.-...- ... + + +.+.++...|-| . .-....+.+++.
T Consensus 117 ~~~eA~~~l~~~~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~ 196 (249)
T PF02571_consen 117 SYEEAAELLKELGGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGID 196 (249)
T ss_pred CHHHHHHHHhhcCCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCC
Confidence 4555555543444479999999987655532 100 0 0 123333333333 2 334455667888
Q ss_pred EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC--CCHHHHHHHHc
Q 014594 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (422)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~--~~~e~l~~i~~ 245 (422)
++-.....+ .-..++++++.. -+..+|++.-|.-|.|.. .+.+++.+.++
T Consensus 197 ~lVtK~SG~-~g~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 197 VLVTKESGG-SGFDEKIEAARE-LGIPVIVIKRPPEPYGDPVVETIEELLDWLE 248 (249)
T ss_pred EEEEcCCCc-hhhHHHHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHHh
Confidence 777763222 233466666665 688888888887665544 46677665543
No 426
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=35.49 E-value=3.1e+02 Score=24.13 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=52.9
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeE
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC 221 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 221 (422)
.+....|++..||..+...+-. |++.|-.|.+.+|... .....++ .| ++..+.. . .+.+.+ .+..+
T Consensus 6 ~l~gk~vlVvGgG~va~rk~~~-Ll~~ga~VtVvsp~~~~~l~~l~~-~~-~i~~~~~--~--~~~~dl------~~~~l 72 (205)
T TIGR01470 6 NLEGRAVLVVGGGDVALRKARL-LLKAGAQLRVIAEELESELTLLAE-QG-GITWLAR--C--FDADIL------EGAFL 72 (205)
T ss_pred EcCCCeEEEECcCHHHHHHHHH-HHHCCCEEEEEcCCCCHHHHHHHH-cC-CEEEEeC--C--CCHHHh------CCcEE
Confidence 3445678888888888877655 7777877888777764 3333332 33 4444442 1 222222 23445
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC-CCeE-EEccC
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM-PILV-VLDEA 255 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l-i~Dea 255 (422)
|+ ..++++ -.-+.+.+.|+. ++++ ++|+.
T Consensus 73 Vi-~at~d~----~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 73 VI-AATDDE----ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EE-ECCCCH----HHHHHHHHHHHHcCCEEEECCCc
Confidence 54 444443 112456666655 7665 36664
No 427
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=35.10 E-value=2.3e+02 Score=28.75 Aligned_cols=84 Identities=18% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHcCC-CCCCEEEeCCHH---------------HHHHHHHHHhcCCCCEEEEcCCCch-----hHHHHHHHcCCEE
Q 014594 136 AALAKDSGL-ESDHILVGCGAD---------------ELIDLIMRCVLDPGDKIVDCPPTFT-----MYEFDAAVNGAAV 194 (422)
Q Consensus 136 ~~la~~~~~-~~~~i~~~~G~~---------------~al~~~~~~l~~~gd~Vl~~~p~y~-----~~~~~~~~~g~~~ 194 (422)
+.+.+++.. ++-+|.+|+|+| .++....++=.+..+.++++.|-|+ .-...+...|+.+
T Consensus 225 ~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~ 304 (596)
T KOG1177|consen 225 ADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATI 304 (596)
T ss_pred HhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEE
Q ss_pred EEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 195 VKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
+. +.-.+|+....+++.+++...++
T Consensus 305 Vf----p~~~f~~k~alqai~~ekcT~l~ 329 (596)
T KOG1177|consen 305 VF----PAPSFDPKDALQAISNEKCTTLY 329 (596)
T ss_pred Ee----eCCCCChHHHHHHHHhhceEEEe
No 428
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=35.07 E-value=3.4e+02 Score=24.46 Aligned_cols=100 Identities=10% Similarity=0.012 Sum_probs=51.7
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.+...+++|.|+...-..+...|.+.|..|++....-....... ...|.++..++.|- -|.+.+++.+.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV---TDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHh
Confidence 33345677666655555566667778877766544333222222 22355666666432 355666655532
Q ss_pred -CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++.+......+ ...+.+++.+..+.
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDI 117 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 3467776553221111 12455666665554
No 429
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=34.77 E-value=2.7e+02 Score=26.07 Aligned_cols=36 Identities=17% Similarity=0.083 Sum_probs=26.8
Q ss_pred CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De 254 (422)
+..+++-++|.. ||..++.+.+.+|++. ++.-|=|.
T Consensus 128 ~lpv~lYn~P~~-tg~~l~~~~i~~L~~~pnv~giK~s 164 (290)
T TIGR00683 128 GLNMIVYSIPFL-TGVNMGIEQFGELYKNPKVLGVKFT 164 (290)
T ss_pred CCCEEEEeCccc-cccCcCHHHHHHHhcCCCEEEEEeC
Confidence 345666566644 8999999999999987 66666664
No 430
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=34.30 E-value=3.8e+02 Score=24.75 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=27.0
Q ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
..+...|+.-+.+|...- -..+.+.+.+++.+.+.|++.+|+. +.+++++|++.
T Consensus 113 ~~~~~aGvdgviipDLP~--ee~~~~~~~~~~~gi~~I~lv~PtT------~~eri~~i~~~ 166 (263)
T CHL00200 113 KKISQAGVKGLIIPDLPY--EESDYLISVCNLYNIELILLIAPTS------SKSRIQKIARA 166 (263)
T ss_pred HHHHHcCCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEEECCCC------CHHHHHHHHHh
Confidence 334445666555552110 1133444444445666666666652 45566666665
No 431
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=34.13 E-value=3.5e+02 Score=24.28 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=45.4
Q ss_pred CCEEEeCCH--HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 147 DHILVGCGA--DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 147 ~~i~~~~G~--~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
..+++|.|+ ...-..+.+.|.+.|.+|++....-..-....+..+.++..+..|- -|.+.+++.+++ .+.
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDV---ASDESIERAFATIKERVGKI 84 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCC---CCHHHHHHHHHHHHHHhCCC
Confidence 456666665 2344455556788898887654331111112222233344444322 245555544321 346
Q ss_pred eEEEEeC-CCCcc---C--cCCCHHHHHHHHcC
Q 014594 220 KCIFLTS-PNNPD---G--SIINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~-p~NPt---G--~~~~~e~l~~i~~~ 246 (422)
.+++.+- ...+. + ...+.+++.+..+.
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~i 117 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDI 117 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCc
Confidence 6665442 12221 1 12456666666554
No 432
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=33.58 E-value=4.4e+02 Score=26.06 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=49.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
.+...+++|.|+...-..+.+.+.+.|.+|++....-..........+..+..+..+ --|.+.+++.+. +.++++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~D---vsd~~~v~~~l~--~IDiLI 250 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQ---VGQEAALAELLE--KVDILI 250 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEee---CCCHHHHHHHhC--CCCEEE
Confidence 344567777665555555566677888777654432221111111112222223221 125667776663 577777
Q ss_pred EeCCCCccCcCCCHHHHHHHHcC
Q 014594 224 LTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
.+...++.+ -.+.+++.+..+.
T Consensus 251 nnAGi~~~~-~~s~e~~~~~~~v 272 (406)
T PRK07424 251 INHGINVHG-ERTPEAINKSYEV 272 (406)
T ss_pred ECCCcCCCC-CCCHHHHHHHHHH
Confidence 654444443 3566666666554
No 433
>PRK07063 short chain dehydrogenase; Provisional
Probab=33.15 E-value=3.6e+02 Score=24.15 Aligned_cols=98 Identities=21% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-----cCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
...+++|.|+...-..+.+.|.+.|.+|++..-.-......... .+.++..++.+- -|.+.+++.+.+
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV---TDAASVAAAVAAAEEA 83 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC---CCHHHHHHHHHHHHHH
Confidence 34577776665555556667888888877654433322222221 244555555332 234555444431
Q ss_pred -CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+...++-+....+.+ ...+.+++.+..+.
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV 116 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence 3466666442221112 23456666665553
No 434
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=32.74 E-value=3.4e+02 Score=23.82 Aligned_cols=97 Identities=20% Similarity=0.148 Sum_probs=49.5
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.++...-..+...|++.|..|.+...............+.++..++.+ -.|.+.+++.+.+ .+.++
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN---LSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 456666655544455666788888877765544433333333334444444432 1245555554421 35677
Q ss_pred EEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++-+....+.+ ...+.+++.+..+.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEV 110 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhh
Confidence 76553332222 22355666665554
No 435
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=32.67 E-value=3.1e+02 Score=25.90 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=50.5
Q ss_pred EEEeCC---HHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEEE
Q 014594 149 ILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIF 223 (422)
Q Consensus 149 i~~~~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~ 223 (422)
|+++.| ..+++.++-.+ .+-| |.|++..|.|...... . -.+.+++..+.. +..+++
T Consensus 80 vi~Gv~~~~t~~ai~~a~~A-~~~Gad~vlv~~P~y~~~~~~-----------------~-l~~yf~~va~a~~~lPv~i 140 (309)
T cd00952 80 VFVGATTLNTRDTIARTRAL-LDLGADGTMLGRPMWLPLDVD-----------------T-AVQFYRDVAEAVPEMAIAI 140 (309)
T ss_pred EEEEeccCCHHHHHHHHHHH-HHhCCCEEEECCCcCCCCCHH-----------------H-HHHHHHHHHHhCCCCcEEE
Confidence 555554 45666555553 3335 8899888876322110 0 012222222222 345666
Q ss_pred EeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 224 LTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
-++|.. ||..++.+.+.+|++. ++.=|=|..
T Consensus 141 Yn~P~~-tg~~l~~~~l~~L~~~pnivgiKdss 172 (309)
T cd00952 141 YANPEA-FKFDFPRAAWAELAQIPQVVAAKYLG 172 (309)
T ss_pred EcCchh-cCCCCCHHHHHHHhcCCCEEEEEecC
Confidence 556643 8999999999999977 666666654
No 436
>PF13552 DUF4127: Protein of unknown function (DUF4127)
Probab=32.61 E-value=4.9e+02 Score=26.59 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
.|++.+.+ +++ .+.+.+.+|+.|.-..++.-.
T Consensus 216 ~L~~~~~~-~~l-~~rv~i~pGADEvg~~LlaRa 247 (497)
T PF13552_consen 216 ELEAYIEE-LGL-SDRVMIYPGADEVGLLLLARA 247 (497)
T ss_pred HHHHHHHh-cCC-CCceeeeCChhHHHHHHHHHH
Confidence 34443333 455 689999999999876666544
No 437
>PLN03013 cysteine synthase
Probab=32.37 E-value=2.5e+02 Score=28.00 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=45.7
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
.|+-.++|..++.++..+-. .| -.|++++-.-..-....+.+|++++.++...++.-..+..++... .....++++
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~-~~~g~~~~~ 254 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILK-NTPDAYMLQ 254 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHh-hcCCeEeCC
Confidence 37777778878777766532 23 345555555556677788899999998743221111333333333 233455544
Q ss_pred CCCCc
Q 014594 226 SPNNP 230 (422)
Q Consensus 226 ~p~NP 230 (422)
.-+||
T Consensus 255 qy~Np 259 (429)
T PLN03013 255 QFDNP 259 (429)
T ss_pred CCCCH
Confidence 33455
No 438
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=32.36 E-value=2.5e+02 Score=25.00 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCCCCEEEeC-CHHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecC-CCC-CCCCH
Q 014594 133 RLRAALAKDSGLESDHILVGC-GADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPR-KSD-FSLNV 207 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~-G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~-~~~-~~~d~ 207 (422)
...+++.+ +|+.++. +... +..+.+..+.... ..|.+|++..+.-. ......+..|+++..++. +.. ...+.
T Consensus 90 ~Ta~~l~~-~G~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~ili~~~~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~ 166 (249)
T PRK05928 90 KTALALKK-LGGKVVF-VPEDGESSELLLELPELL-LKGKRVLYLRGNGGREVLGDTLEERGAEVDECEVYERVPPKLDG 166 (249)
T ss_pred HHHHHHHH-cCCCccc-cCCCCcChHHHHhChhhh-cCCCEEEEECCCCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCCh
Confidence 33344433 4654332 2223 3344444333322 35778888877653 345555668888888772 110 01123
Q ss_pred HHHHHHhhcCCCeEEEEeCCC
Q 014594 208 ELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 208 ~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+.....+...+..+|++++|+
T Consensus 167 ~~~~~~~~~~~~d~ivftS~~ 187 (249)
T PRK05928 167 AELLARLQSGEVDAVIFTSPS 187 (249)
T ss_pred HHHHHHHHhCCCCEEEECCHH
Confidence 333333323567888877765
No 439
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=32.05 E-value=2.5e+02 Score=26.07 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=55.9
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCe
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPK 220 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~ 220 (422)
+..+++.+..+-.+++..+-.. ......|.++.-+.......++ +|+.++.++ +++++.+++.+.. ..++
T Consensus 157 ikdnHi~~~g~i~~~v~~~k~~-~p~~~~I~VEv~tleea~~A~~-~GaDiI~LD-----n~~~e~l~~~v~~~~~~~~~ 229 (273)
T PRK05848 157 LKDTHLKHIKDLKEFIQHARKN-IPFTAKIEIECESLEEAKNAMN-AGADIVMCD-----NMSVEEIKEVVAYRNANYPH 229 (273)
T ss_pred cCHHHHHHHCcHHHHHHHHHHh-CCCCceEEEEeCCHHHHHHHHH-cCCCEEEEC-----CCCHHHHHHHHHHhhccCCC
Confidence 3444555544555555555332 2223457776666655555443 788888765 4688888887752 1123
Q ss_pred EEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li 251 (422)
..+.. +|.+ +++.+.++++.|+-+|
T Consensus 230 ~~ieA-----sGgI-t~~ni~~ya~~GvD~I 254 (273)
T PRK05848 230 VLLEA-----SGNI-TLENINAYAKSGVDAI 254 (273)
T ss_pred eEEEE-----ECCC-CHHHHHHHHHcCCCEE
Confidence 33222 5666 8899999998855433
No 440
>PLN02565 cysteine synthase
Probab=31.69 E-value=2.5e+02 Score=26.75 Aligned_cols=52 Identities=12% Similarity=-0.084 Sum_probs=34.0
Q ss_pred CEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 148 HILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
.|+-.+++..++.++..+- +.-.-.|+++.-.-..-....+.+|++++.++.
T Consensus 69 ~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 69 VLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 3777777777777766643 222133555555555666778889999998864
No 441
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=31.53 E-value=61 Score=24.96 Aligned_cols=26 Identities=19% Similarity=0.348 Sum_probs=21.3
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.+++++||+.++.+++.|++.
T Consensus 29 ~tpsr~eirekLa~~~~~~~~~vvv~ 54 (99)
T PRK01178 29 ATPSRKDVRKKLAAMLNADKELVVVR 54 (99)
T ss_pred CCCCHHHHHHHHHHHHCcCCCEEEEE
Confidence 45567899999999999888777764
No 442
>PRK06194 hypothetical protein; Provisional
Probab=31.26 E-value=4.1e+02 Score=24.21 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=51.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.+.+.|..|++..-.-....... ...|.++..+..+ --|.+.+++.+.. .+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD---VSDAAQVEALADAALERFGA 83 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHHHHHcCC
Confidence 45677666655555566667888888776554322222222 1235566666543 2355666655532 24
Q ss_pred CeEEEEeCCCCccCcC--CCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGSI--INDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~--~~~e~l~~i~~~ 246 (422)
.++++-+......+.. .+.+++.+..+.
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGV 113 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6776655333222332 355666665554
No 443
>PRK10892 D-arabinose 5-phosphate isomerase; Provisional
Probab=31.12 E-value=3.3e+02 Score=25.75 Aligned_cols=99 Identities=16% Similarity=0.104 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCCCCCE-EEeCCHHHHHHHHHH-HhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEecCCCCCCCCHHH
Q 014594 133 RLRAALAKDSGLESDHI-LVGCGADELIDLIMR-CVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSLNVEL 209 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i-~~~~G~~~al~~~~~-~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~ 209 (422)
++.++....... ...| +++.|++..+..-+. .|..-|..+....+.+..+...... .+--++.+.. .+..-+.-+
T Consensus 35 ~l~~~~~~l~~a-~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~~I~iS~-sG~t~~~~~ 112 (326)
T PRK10892 35 DFTLACEKMFWC-KGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISN-SGESSEILA 112 (326)
T ss_pred HHHHHHHHHHhc-CCeEEEEeCcHhHHHHHHHHHHHhcCCceeEEeChHHhhccccccCCCCCEEEEEeC-CCCCHHHHH
Confidence 455544443442 2345 555665555443333 3445566666544433222111111 1223444443 223334444
Q ss_pred HHHHhhcCCCeEEEEe-CCCCccCc
Q 014594 210 IADAVEREKPKCIFLT-SPNNPDGS 233 (422)
Q Consensus 210 l~~~i~~~~~~~i~l~-~p~NPtG~ 233 (422)
..+..++.+.+.|.++ +++||-+.
T Consensus 113 ~~~~ak~~g~~vi~iT~~~~s~la~ 137 (326)
T PRK10892 113 LIPVLKRLHVPLICITGRPESSMAR 137 (326)
T ss_pred HHHHHHHCCCcEEEEECCCCCcccc
Confidence 4444444677888877 67777544
No 444
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=31.05 E-value=3.9e+02 Score=23.88 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=51.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++....-..........+.++..+..+ -.|.+.+++.+.+ .+.++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLD---VTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 456777666655566666678889888776655544444333334445555432 2345555554432 35666
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++.+......+. -.+.+++.+..+.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAV 110 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 665532211121 2245666655544
No 445
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=30.77 E-value=3.1e+02 Score=24.63 Aligned_cols=77 Identities=23% Similarity=0.258 Sum_probs=38.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+.+.+.+ .+.+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDV---RSLDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEecc---CCHHHHHHHHHHHHHHhCCCC
Confidence 34566666555444555666888898887764433333333333344454444321 234444443321 3456
Q ss_pred EEEEe
Q 014594 221 CIFLT 225 (422)
Q Consensus 221 ~i~l~ 225 (422)
.++-+
T Consensus 82 ~li~~ 86 (262)
T TIGR03325 82 CLIPN 86 (262)
T ss_pred EEEEC
Confidence 66544
No 446
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=30.74 E-value=3e+02 Score=22.49 Aligned_cols=129 Identities=12% Similarity=0.167 Sum_probs=67.9
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCC-EEEEcCCC--chhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 149 ILVGCGADELIDLIMRCVLDPGD-KIVDCPPT--FTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd-~Vl~~~p~--y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
+++|.|+...=..+.+.|++.|+ .|++.... ....... .+..+.++..++.|- -|.+.+++.+++ .
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL---SDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET---TSHHHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 56666665555556666777765 45554444 3322222 334578888887542 256666665532 4
Q ss_pred CCeEEEEeCCCCccCcCC--CHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc
Q 014594 218 KPKCIFLTSPNNPDGSII--NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~--~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 289 (422)
....++.+....+.+... +.+++.+..+.++. ..+........ ...+.++.+.|.+-..+.+|
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~-------~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~ 144 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLF-------GPFLLAKALLP--QGGGKIVNISSIAGVRGSPG 144 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTH-------HHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTT
T ss_pred cccccccccccccccccccccchhhhhccccccc-------eeeeeeehhee--ccccceEEecchhhccCCCC
Confidence 566777664433333333 45777777664321 10000000111 24566778888776665444
No 447
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=30.58 E-value=2.9e+02 Score=24.26 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=32.0
Q ss_pred CCCEEEEcCCCc--hhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 169 PGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 169 ~gd~Vl~~~p~y--~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
.+..|++....- .......+..|+++..++. .....-+.+...+.+.+.....|++.+++
T Consensus 121 ~~~~il~~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~~~~~iiftS~~ 183 (239)
T cd06578 121 KGKRILRPRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEGAIDAVLFTSPS 183 (239)
T ss_pred CCCEEEEEcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcCCCcEEEEeCHH
Confidence 456777666544 3455555557888877762 11111112445555554444567766654
No 448
>PRK08862 short chain dehydrogenase; Provisional
Probab=30.56 E-value=2.6e+02 Score=24.84 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=41.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C-
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E- 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~- 217 (422)
..+++|.++...-..+...|.+.|..|++....-...... .+..|.++..+..+. .|.+.+++.+++ .
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD---FSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC---CCHHHHHHHHHHHHHHhCC
Confidence 4566666666554555666888998888765444333222 222455666665432 245666554421 2
Q ss_pred CCeEEEEe
Q 014594 218 KPKCIFLT 225 (422)
Q Consensus 218 ~~~~i~l~ 225 (422)
+..+++.+
T Consensus 83 ~iD~li~n 90 (227)
T PRK08862 83 APDVLVNN 90 (227)
T ss_pred CCCEEEEC
Confidence 56665544
No 449
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=30.32 E-value=1.8e+02 Score=23.99 Aligned_cols=25 Identities=12% Similarity=0.197 Sum_probs=18.4
Q ss_pred eCCCCCHHHHHHHHH-hCCcEEEeCC
Q 014594 369 VTSGMDAKKLKDDLA-KMGVMIRHYN 393 (422)
Q Consensus 369 ~~~~~~~~~~~~~L~-~~gI~v~~~~ 393 (422)
+|...|..++.++|. +.|+.|.+.+
T Consensus 41 Lp~~aD~NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 41 LPKHADNNEVLKALCREAGWTVEPDG 66 (150)
T ss_pred CCCcCCHHHHHHHHHHhCCEEEccCC
Confidence 344567888887776 9999997643
No 450
>KOG3424 consensus 40S ribosomal protein S24 [Translation, ribosomal structure and biogenesis]
Probab=30.07 E-value=71 Score=25.27 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=21.6
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+...-.++||.|++.|..++|.|++-
T Consensus 33 a~vsK~EirEKla~mYkt~~d~V~vf 58 (132)
T KOG3424|consen 33 ANVSKTEIREKLAKMYKTTPDAVFVF 58 (132)
T ss_pred CCCCHHHHHHHHHHHhcCCcceEEEE
Confidence 45567899999999999999888753
No 451
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=29.69 E-value=4.1e+02 Score=23.75 Aligned_cols=98 Identities=8% Similarity=0.021 Sum_probs=49.9
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
...+++|.|+...-..+.+.|.+.|.+|++....-. ......+..+.++..+..|- -|.+.+++.+++ .+.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL---IQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC---CCHHHHHHHHHHHHHHcCCC
Confidence 345666666665556666678889988876543211 11122233465665555332 345555554432 356
Q ss_pred eEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+.++.+....+.+. ..+.+++.+..+.
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~v 113 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVINI 113 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHhee
Confidence 66664422111222 2356666666554
No 452
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=29.54 E-value=3.1e+02 Score=27.40 Aligned_cols=52 Identities=21% Similarity=0.143 Sum_probs=34.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
+.|+.++++..+..++..+-. -| -.|+++...-..-....+.+|++++.++.
T Consensus 63 ~~vv~~ssGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 63 DTIIEPTSGNTGIGLALVAAI-KGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CEEEEeCCcHHHHHHHHHHHH-cCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 457777888888777766432 24 23555554444555667889999999984
No 453
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.46 E-value=4.5e+02 Score=24.09 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=44.7
Q ss_pred CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH---HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV---ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~---~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
++..+++..+.| ...++.+|.+++.+.. ++..+.+ .++.+.+++.+.++|+.. ++. +....+.|++
T Consensus 169 ~~~~~v~~H~af---~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~------~~~~~~~la~ 237 (266)
T cd01018 169 KQRAFMVYHPAW---GYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGVRVVFVQ-PQF------STKSAEAIAR 237 (266)
T ss_pred CCCeEEEECchh---HHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEc-CCC------CcHHHHHHHH
Confidence 345677765555 5677889999887642 3445644 555555666789988865 332 2245667777
Q ss_pred C-CCeEE
Q 014594 246 M-PILVV 251 (422)
Q Consensus 246 ~-~~~li 251 (422)
. |+-++
T Consensus 238 ~~g~~v~ 244 (266)
T cd01018 238 EIGAKVV 244 (266)
T ss_pred HcCCeEE
Confidence 5 76544
No 454
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.40 E-value=4e+02 Score=23.51 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=50.0
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc--CCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
...+++|.++...-..+.+.+++.|..|++..-.-.......... +.++..+..+ -.|.+.+.+.+.+ .+
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAAD---VSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHHHHHhCC
Confidence 345677766555555566667788877766544333222222211 3445555432 3456666665532 35
Q ss_pred CeEEEEeCCCCccCc---CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS---IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~---~~~~e~l~~i~~~ 246 (422)
..+|+.+...++.+. -.+.+.+++..+.
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAV 112 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 677776543322222 2355666655543
No 455
>PRK08263 short chain dehydrogenase; Provisional
Probab=29.25 E-value=4.4e+02 Score=23.92 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=47.2
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.++...=..+...+.+.|..|++..-.-..........+..+..+..+- -|.+.+++.+.+ .+..++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDV---TDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 466665554444555566777887777654333222223333343444444322 245555554432 356676
Q ss_pred EEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+.+.-....+. -.+.+++.+..+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~ 107 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDT 107 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHH
Confidence 65532222222 2355666666554
No 456
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=29.03 E-value=3.1e+02 Score=25.69 Aligned_cols=90 Identities=16% Similarity=0.074 Sum_probs=52.9
Q ss_pred EEEeCCHHHHHHHHHHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH-HHHHHHhhcCCCeEEEE
Q 014594 149 ILVGCGADELIDLIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV-ELIADAVEREKPKCIFL 224 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~~~~~~i~l 224 (422)
+++.+|....+..++.+.... .+.+++... .+.....++..|+.+..++...+...+. +.+.+.+.+.++.++++
T Consensus 93 ~vl~Sg~g~nl~al~~~~~~~~~~~~i~~visn-~~~~~~lA~~~gIp~~~~~~~~~~~~~~~~~~~~~l~~~~~Dlivl 171 (286)
T PRK13011 93 LIMVSKFDHCLNDLLYRWRIGELPMDIVGVVSN-HPDLEPLAAWHGIPFHHFPITPDTKPQQEAQVLDVVEESGAELVVL 171 (286)
T ss_pred EEEEcCCcccHHHHHHHHHcCCCCcEEEEEEEC-CccHHHHHHHhCCCEEEeCCCcCchhhhHHHHHHHHHHhCcCEEEE
Confidence 467777777788888765332 233333221 2233444788999988876432211222 23455566568898887
Q ss_pred eCCCCccCcCCCHHHHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i 243 (422)
.. .+.+++.+-+...
T Consensus 172 ag----y~~il~~~~l~~~ 186 (286)
T PRK13011 172 AR----YMQVLSPELCRKL 186 (286)
T ss_pred eC----hhhhCCHHHHhhc
Confidence 65 5577776666554
No 457
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=28.91 E-value=4.8e+02 Score=24.30 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=26.7
Q ss_pred CeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 219 PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
..+++-++|. .||..++.+.+.+|++. ++.-|=|..
T Consensus 131 lPv~iYn~P~-~tg~~l~~~~l~~L~~~pnvvgiK~s~ 167 (293)
T PRK04147 131 NPMIVYNIPA-LTGVNLSLDQFNELFTLPKVIGVKQTA 167 (293)
T ss_pred CCEEEEeCch-hhccCCCHHHHHHHhcCCCEEEEEeCC
Confidence 4455556664 38999999999999987 777776753
No 458
>PRK09375 quinolinate synthetase; Provisional
Probab=28.56 E-value=1.6e+02 Score=27.98 Aligned_cols=77 Identities=18% Similarity=0.280 Sum_probs=45.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+++.|++- ++.. +..+ .++|+ ++.-|....-......-+.+++..+ ..-...++++++++.-. ..+.+.+++
T Consensus 139 D~~cTSSn--Al~i-v~~~-~~~~~-IlF~PD~~Lg~~v~~l~~k~vilw~G~C~vH~~~~~e~i~~~r~-~~Pda~Vv~ 212 (319)
T PRK09375 139 DIVCTSSN--AVKI-VEAL-PQGKK-ILFLPDQHLGRYVAKQTGADIILWPGHCIVHEEFTAEDLERLRA-EYPDAKVLV 212 (319)
T ss_pred CeEEeCHH--HHHH-Hhcc-CCCCe-EEEeCchHHHHHHHHcCCCEEEccCCcchhccCcCHHHHHHHHH-HCcCCeEEE
Confidence 55555533 2322 2223 34554 5556666655555555677766554 11123578899988876 568889999
Q ss_pred CCCCc
Q 014594 226 SPNNP 230 (422)
Q Consensus 226 ~p~NP 230 (422)
||+.+
T Consensus 213 HPEc~ 217 (319)
T PRK09375 213 HPECP 217 (319)
T ss_pred ecCCC
Confidence 99864
No 459
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=28.53 E-value=4.6e+02 Score=23.99 Aligned_cols=55 Identities=27% Similarity=0.252 Sum_probs=28.2
Q ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
...+...|+.-+.+|.... -..+.+.+.+++.+.+.+++++|+. +.+++.++++.
T Consensus 108 ~~~~~~aGvdgviipDlp~--ee~~~~~~~~~~~gl~~i~lv~P~T------~~eri~~i~~~ 162 (256)
T TIGR00262 108 YAKCKEVGVDGVLVADLPL--EESGDLVEAAKKHGVKPIFLVAPNA------DDERLKQIAEK 162 (256)
T ss_pred HHHHHHcCCCEEEECCCCh--HHHHHHHHHHHHCCCcEEEEECCCC------CHHHHHHHHHh
Confidence 3344446666666652211 1234444444545666666666653 45566666665
No 460
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.42 E-value=4.2e+02 Score=23.51 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=17.6
Q ss_pred CHHHHHHHHHhCCcEEEeCCC
Q 014594 374 DAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 374 ~~~~~~~~L~~~gI~v~~~~~ 394 (422)
-.+.+.+.|+..|+++.|-..
T Consensus 151 vP~~Ll~QL~~gGrlv~PvG~ 171 (209)
T COG2518 151 VPEALLDQLKPGGRLVIPVGS 171 (209)
T ss_pred CCHHHHHhcccCCEEEEEEcc
Confidence 457899999999999998663
No 461
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=28.39 E-value=2.8e+02 Score=21.36 Aligned_cols=69 Identities=17% Similarity=0.232 Sum_probs=45.8
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li 251 (422)
.+.+.++.-......++..|.. .+. | +++.+..+++.+++++.|+. .-.+-..+.++.|..++
T Consensus 28 v~~v~d~~~~~~~~~~~~~~~~--~~~-------~---~~~ll~~~~~D~V~I~tp~~-----~h~~~~~~~l~~g~~v~ 90 (120)
T PF01408_consen 28 VVAVCDPDPERAEAFAEKYGIP--VYT-------D---LEELLADEDVDAVIIATPPS-----SHAEIAKKALEAGKHVL 90 (120)
T ss_dssp EEEEECSSHHHHHHHHHHTTSE--EES-------S---HHHHHHHTTESEEEEESSGG-----GHHHHHHHHHHTTSEEE
T ss_pred EEEEEeCCHHHHHHHHHHhccc--chh-------H---HHHHHHhhcCCEEEEecCCc-----chHHHHHHHHHcCCEEE
Confidence 3456777766666667778887 221 2 44445446789999998873 34456666777788988
Q ss_pred EccCCc
Q 014594 252 LDEAYT 257 (422)
Q Consensus 252 ~Deay~ 257 (422)
++-.-.
T Consensus 91 ~EKP~~ 96 (120)
T PF01408_consen 91 VEKPLA 96 (120)
T ss_dssp EESSSS
T ss_pred EEcCCc
Confidence 886544
No 462
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=28.29 E-value=1.8e+02 Score=26.76 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=41.5
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
.|++..|++++-.++-. +.+.|..|+...-+-..... ....|...+.. ..+|.+.+.+.+.+.++++|+-.
T Consensus 2 ~ILvlGGT~egr~la~~-L~~~g~~v~~s~~t~~~~~~-~~~~g~~~v~~-----g~l~~~~l~~~l~~~~i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKG-LIAQGIEILVTVTTSEGKHL-YPIHQALTVHT-----GALDPQELREFLKRHSIDILVDA 72 (256)
T ss_pred eEEEEechHHHHHHHHH-HHhCCCeEEEEEccCCcccc-ccccCCceEEE-----CCCCHHHHHHHHHhcCCCEEEEc
Confidence 58888888886555444 66777766654432211111 11233333322 25788889898887778877643
No 463
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=28.16 E-value=4.9e+02 Score=24.10 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=53.5
Q ss_pred EEEeCCHHHHHHHH-HHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeE
Q 014594 149 ILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKC 221 (422)
Q Consensus 149 i~~~~G~~~al~~~-~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~ 221 (422)
.++.+|++.+|... .+.|.+.|..|++..-.=.... ..-...|.++..++.|-...-+.+.+...+.+. ...+
T Consensus 8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv 87 (265)
T COG0300 8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV 87 (265)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence 44445666666544 4457788877776665554333 333336677766665433233466666666533 3444
Q ss_pred EEEeCCC-CccC--cCCCHHHHHHHHcCCC
Q 014594 222 IFLTSPN-NPDG--SIINDEDLLKILEMPI 248 (422)
Q Consensus 222 i~l~~p~-NPtG--~~~~~e~l~~i~~~~~ 248 (422)
++ +|.. .-.| .-.+.++..++.+.|+
T Consensus 88 LV-NNAG~g~~g~f~~~~~~~~~~mi~lN~ 116 (265)
T COG0300 88 LV-NNAGFGTFGPFLELSLDEEEEMIQLNI 116 (265)
T ss_pred EE-ECCCcCCccchhhCChHHHHHHHHHHH
Confidence 44 4443 3344 3346666666666543
No 464
>PRK06841 short chain dehydrogenase; Provisional
Probab=28.07 E-value=4.3e+02 Score=23.46 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=49.5
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
++...+++|.++...-..+.+.+.+.|.+|++...............+.++..++.+- .|.+.+++.+.+ .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV---SDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 3345677776555444555666778888877655443322222222333444444322 245555554432 25
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.++++.+....+.+ ...+.+++.+..+.
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 119 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDI 119 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67776553222111 12355666665543
No 465
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.01 E-value=2.9e+02 Score=21.60 Aligned_cols=15 Identities=20% Similarity=0.306 Sum_probs=7.6
Q ss_pred EEeCCHHHHHHHHHH
Q 014594 150 LVGCGADELIDLIMR 164 (422)
Q Consensus 150 ~~~~G~~~al~~~~~ 164 (422)
+++.|++..+...+.
T Consensus 5 i~G~G~S~~~a~~~~ 19 (128)
T cd05014 5 VTGVGKSGHIARKIA 19 (128)
T ss_pred EEeCcHhHHHHHHHH
Confidence 455565555444443
No 466
>PRK07024 short chain dehydrogenase; Provisional
Probab=27.99 E-value=4.4e+02 Score=23.56 Aligned_cols=96 Identities=9% Similarity=0.026 Sum_probs=47.6
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcC--CEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
.+++|.|+...=..+...|.+.|..|++................ .++..+..|- -|.+.+++.+++ .+++
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADV---RDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCC---CCHHHHHHHHHHHHHhCCCCC
Confidence 57777666655556666678888887776544333333222211 1444444332 245555554432 2356
Q ss_pred EEEEeC-CCCccCcC--CCHHHHHHHHcC
Q 014594 221 CIFLTS-PNNPDGSI--INDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~-p~NPtG~~--~~~e~l~~i~~~ 246 (422)
.++.+. ...+.... .+.+++.+..+.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDT 109 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhH
Confidence 665442 11111111 345666666554
No 467
>PRK06114 short chain dehydrogenase; Provisional
Probab=27.98 E-value=4.4e+02 Score=23.52 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=50.4
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC-chhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-FTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
.++...+++|.|+...-..+.+.|.+.|..|++.... -..... ..+..+.++..++.+- -|.+.+++.+.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~i~~~~~~~~ 81 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV---TSKADLRAAVARTE 81 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHH
Confidence 3444567777666655566666688888777665432 211121 2222455555555332 245555554432
Q ss_pred ---CCCeEEEEeCC-CCc-cCcCCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSP-NNP-DGSIINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p-~NP-tG~~~~~e~l~~i~~~ 246 (422)
.+.+.++.+.. .++ .-...+.+++.+..+.
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDI 116 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhh
Confidence 34566664422 111 1122355666666554
No 468
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=27.91 E-value=4.6e+02 Score=23.71 Aligned_cols=93 Identities=17% Similarity=0.147 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC--CCCCCCHH
Q 014594 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 208 (422)
...+++.++ |+.+ .++...+..+++...+......|++|++....-. .........|+.+..++.- ..-..+.+
T Consensus 88 ~Ta~~l~~~-G~~~-~~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~ 165 (248)
T COG1587 88 KTAEALRKL-GIKV-DFIPEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEA 165 (248)
T ss_pred HHHHHHHHh-CCCC-CcCCCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHH
Confidence 344444443 4322 2333456776776667666666788887665443 3555566689998888721 11123355
Q ss_pred HHHHHhhcCCCeEEEEeCC
Q 014594 209 LIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 209 ~l~~~i~~~~~~~i~l~~p 227 (422)
.+...+...+.++|+++++
T Consensus 166 ~~~~~~~~~~~d~v~ftS~ 184 (248)
T COG1587 166 TLIELLKLGEVDAVVFTSS 184 (248)
T ss_pred HHHHHHHhCCCCEEEEeCH
Confidence 5566666577888887665
No 469
>PRK06484 short chain dehydrogenase; Validated
Probab=27.76 E-value=5.5e+02 Score=25.99 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=49.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.+.+ .+.+.+
T Consensus 271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADI---TDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 455555554444445556788888877765444444444444555655555332 245555555432 345666
Q ss_pred EEeCCCC-ccC--cCCCHHHHHHHHcC
Q 014594 223 FLTSPNN-PDG--SIINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~N-PtG--~~~~~e~l~~i~~~ 246 (422)
+-|.-.. +.+ .-.+.+++.+..+.
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~ 374 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDV 374 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHh
Confidence 5442111 111 12355666666654
No 470
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.69 E-value=4.7e+02 Score=24.31 Aligned_cols=71 Identities=18% Similarity=0.194 Sum_probs=45.0
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEec-CCCCCCCCHHHHHHH---hhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+..+++..|.| ...++.+|.+++.+- ...+....+.+|.+. +++.+.++|+...-.+ ...++.|++
T Consensus 177 ~~~~v~~H~af---~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~ia~ 246 (287)
T cd01137 177 KRKLVTSEGAF---SYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVN-------DRLMKQVAK 246 (287)
T ss_pred cCEEEEecccH---HHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCC-------hHHHHHHHH
Confidence 45577776666 456678999988754 334445666555554 5567899888653322 255677877
Q ss_pred C-CCeE
Q 014594 246 M-PILV 250 (422)
Q Consensus 246 ~-~~~l 250 (422)
. |+.+
T Consensus 247 ~~gv~v 252 (287)
T cd01137 247 ETGAKI 252 (287)
T ss_pred HhCCcc
Confidence 6 6654
No 471
>PRK06482 short chain dehydrogenase; Provisional
Probab=27.51 E-value=4.7e+02 Score=23.68 Aligned_cols=95 Identities=9% Similarity=0.103 Sum_probs=46.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.|+...=..+...|.+.|..|++..-............+.++..+..+- -|.+.+++.+.+ .+...|
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDV---TDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 466766655544555666788888877655444333333233333444444321 245555554431 346667
Q ss_pred EEeCCCCccCc--CCCHHHHHHHHc
Q 014594 223 FLTSPNNPDGS--IINDEDLLKILE 245 (422)
Q Consensus 223 ~l~~p~NPtG~--~~~~e~l~~i~~ 245 (422)
+.+......|. ..+.+++.+..+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~ 105 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQID 105 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHH
Confidence 65532221222 234555555444
No 472
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=27.28 E-value=4.4e+02 Score=23.31 Aligned_cols=90 Identities=19% Similarity=0.111 Sum_probs=51.0
Q ss_pred EEeCCHHHHHHHHHHHhcCCC---CEEE-EcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEE
Q 014594 150 LVGCGADELIDLIMRCVLDPG---DKIV-DCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 150 ~~~~G~~~al~~~~~~l~~~g---d~Vl-~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
++.+|.-..+..++.++.+.+ +.++ +.+--.......++..|+.+..++..+ ....+-+++.+.+.+.++.+++
T Consensus 4 vl~Sg~Gsn~~al~~~~~~~~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv 83 (207)
T PLN02331 4 VFVSGGGSNFRAIHDACLDGRVNGDVVVVVTNKPGCGGAEYARENGIPVLVYPKTKGEPDGLSPDELVDALRGAGVDFVL 83 (207)
T ss_pred EEEeCCChhHHHHHHHHHcCCCCeEEEEEEEeCCCChHHHHHHHhCCCEEEeccccCCCcccchHHHHHHHHhcCCCEEE
Confidence 445555556777777654432 3322 233223333456677899887766321 1123345666667667889888
Q ss_pred EeCCCCccCcCCCHHHHHHH
Q 014594 224 LTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i 243 (422)
+.. .+.+++.+-+...
T Consensus 84 ~ag----y~~il~~~~l~~~ 99 (207)
T PLN02331 84 LAG----YLKLIPVELVRAY 99 (207)
T ss_pred EeC----cchhCCHHHHhhC
Confidence 765 4567776655443
No 473
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=27.18 E-value=4.3e+02 Score=24.47 Aligned_cols=24 Identities=8% Similarity=0.206 Sum_probs=11.7
Q ss_pred CcCCCHHHHHHHHcC---CCeEEEccC
Q 014594 232 GSIINDEDLLKILEM---PILVVLDEA 255 (422)
Q Consensus 232 G~~~~~e~l~~i~~~---~~~li~Dea 255 (422)
|..-...++.+.++. .++.|.|..
T Consensus 198 G~t~~~~~~~~~ak~~g~~ii~IT~~~ 224 (292)
T PRK11337 198 GRTSDVIEAVELAKKNGAKIICITNSY 224 (292)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 333334455555554 345556644
No 474
>PRK10494 hypothetical protein; Provisional
Probab=27.13 E-value=2.1e+02 Score=26.37 Aligned_cols=69 Identities=9% Similarity=0.070 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH--HHHhcCCCCEEEEcCCCch-hHHHHHHHcCCEEEEecC
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLI--MRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~--~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~ 199 (422)
..++-+.++..+|+++++|++-+-+..-.+.+ .+.+++....++++++.|- .....++..|.+++++|.
T Consensus 138 EA~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~~~~~~~iiLVTsa~Hm~RA~~~f~~~Gl~v~p~Pt 209 (259)
T PRK10494 138 TAEVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPA 209 (259)
T ss_pred HHHHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHcCCceeecCC
Confidence 34555666667899888888743222222221 2224443234555555542 334566779999999884
No 475
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=27.06 E-value=1.7e+02 Score=23.86 Aligned_cols=57 Identities=25% Similarity=0.304 Sum_probs=41.7
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH-HHHHHHHc----C--CC-eEEEccCCcc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND-EDLLKILE----M--PI-LVVLDEAYTE 258 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~-e~l~~i~~----~--~~-~li~Deay~~ 258 (422)
+...+++.|.+.+.+.++..|++-.|-|..|..-+. +.+.++++ . ++ +..+||-|+-
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 346789999999998999999999999998887754 33333333 2 55 4669999873
No 476
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=27.06 E-value=2.9e+02 Score=24.53 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=35.8
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc-hhHHHHHHHcC
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNG 191 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g 191 (422)
.++...|++..||..|..-+-. |++.|..|.+..|.. +.........+
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~-ll~~ga~v~Vvs~~~~~el~~~~~~~~ 57 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARL-LLKAGADVTVVSPEFEPELKALIEEGK 57 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHH-HHhcCCEEEEEcCCccHHHHHHHHhcC
Confidence 4555689999999999887766 788899999999988 44444444444
No 477
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=26.93 E-value=1.8e+02 Score=23.85 Aligned_cols=54 Identities=15% Similarity=0.207 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH-----HHHHHHHcC-CC-eEEEccCCc
Q 014594 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIIND-----EDLLKILEM-PI-LVVLDEAYT 257 (422)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~-----e~l~~i~~~-~~-~li~Deay~ 257 (422)
..+.+.|.+.+.+.++..|++--|-|+.|..-+. +...+|.+. ++ +..+||-|+
T Consensus 40 ~~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 40 TPDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred chHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3468889999888889999988999999988653 222223322 44 567999987
No 478
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=26.79 E-value=4.7e+02 Score=23.46 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=53.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEE--EcCC-----------CchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIV--DCPP-----------TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl--~~~p-----------~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (422)
++..+||....-.+.+++-+ .+.+. +..| ........++..|..++.+.......--.+++.+.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~ 82 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLG 82 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHH
Confidence 44567776666666665444 43322 1112 1224456677789988777643322223556666665
Q ss_pred cCCCeEEEEeCCCCccCcCCCHHHHH---HHHcC-CCe
Q 014594 216 REKPKCIFLTSPNNPDGSIINDEDLL---KILEM-PIL 249 (422)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~e~l~---~i~~~-~~~ 249 (422)
+.+...|+ +|.+.+..+.. ++|+. |+.
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~ 113 (222)
T TIGR00289 83 ELDVEALC-------IGAIESNYQKSRIDKVCRELGLK 113 (222)
T ss_pred HcCCCEEE-------ECccccHHHHHHHHHHHHHcCCE
Confidence 55778888 89988775554 44544 663
No 479
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=26.73 E-value=1.7e+02 Score=25.88 Aligned_cols=97 Identities=19% Similarity=0.274 Sum_probs=49.5
Q ss_pred eCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecC---C--CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 152 GCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPR---K--SDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 152 ~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~--~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+.|-|.++-.-.+.+.+.| |.|+-.--+|..-...+...|.++++-.. . .-..+|++++.+ .+|.++++.
T Consensus 15 GVGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~----R~P~vvLVD 90 (211)
T PF02702_consen 15 GVGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILA----RRPQVVLVD 90 (211)
T ss_dssp TSSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHH----H--SEEEES
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHh----cCCCEEEeC
Confidence 4577777766666677777 76665555565444555557777655431 0 112578777655 467888886
Q ss_pred --CCCCccCcCCC--HHHHHHHHcCCCeEEE
Q 014594 226 --SPNNPDGSIIN--DEDLLKILEMPILVVL 252 (422)
Q Consensus 226 --~p~NPtG~~~~--~e~l~~i~~~~~~li~ 252 (422)
...|+-|.-.. .+++++|.+.|+-|+.
T Consensus 91 ELAHtN~pgsr~~kR~qDVeeLL~aGIdV~T 121 (211)
T PF02702_consen 91 ELAHTNAPGSRHKKRYQDVEELLDAGIDVYT 121 (211)
T ss_dssp -TT-B--TT-SSSBHHHHHHHHHHTT-EEEE
T ss_pred cccccCCCCCCCcccHHhHHHHHHCCCeEEE
Confidence 44587777653 4778888887775553
No 480
>PLN00011 cysteine synthase
Probab=26.63 E-value=3.5e+02 Score=25.67 Aligned_cols=53 Identities=11% Similarity=-0.076 Sum_probs=36.4
Q ss_pred CCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 147 DHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
+.|+..+++..++.++..+- +.-.-.|+++...-.......+.+|++++.++.
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 45888888888877776653 222234566665555666777889999999884
No 481
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=26.56 E-value=3.5e+02 Score=25.95 Aligned_cols=99 Identities=17% Similarity=0.283 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcC-CCchh-----HHHHHHHcCCEEEEecCCCCCCCC-----HHHHHHHhhcCCCeE
Q 014594 153 CGADELIDLIMRCVLDPGDKIVDCP-PTFTM-----YEFDAAVNGAAVVKVPRKSDFSLN-----VELIADAVEREKPKC 221 (422)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~-p~y~~-----~~~~~~~~g~~~~~v~~~~~~~~d-----~~~l~~~i~~~~~~~ 221 (422)
.|=|--+.-+...+.+.|-+|++.. -+|.. ...+++..|+.++.-+ .+-| .+.++++.. .+..+
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~----~G~DpAaVafDAi~~Aka-r~~Dv 224 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK----EGADPAAVAFDAIQAAKA-RGIDV 224 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC----CCCCcHHHHHHHHHHHHH-cCCCE
Confidence 3556777788887888887776544 47742 2234566888888754 2344 456666665 67888
Q ss_pred EEEeCC---CCccCcCCCHHHHHHHHcC--C-----CeEEEccCC
Q 014594 222 IFLTSP---NNPDGSIINDEDLLKILEM--P-----ILVVLDEAY 256 (422)
Q Consensus 222 i~l~~p---~NPtG~~~~~e~l~~i~~~--~-----~~li~Deay 256 (422)
+++... ||-+...-.++.+.++++. . ++++.|..-
T Consensus 225 vliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAtt 269 (340)
T COG0552 225 VLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATT 269 (340)
T ss_pred EEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEccc
Confidence 887654 5656555444555555543 2 667778764
No 482
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=26.52 E-value=4.6e+02 Score=23.32 Aligned_cols=99 Identities=7% Similarity=0.035 Sum_probs=50.6
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.....+++|.|+...-..+.+.+++.|-+|++....-...... .+..|.++..+..+- .|.+.+++.+.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV---TDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC---CCHHHHHHHHHHHHHh
Confidence 3345677777666555566666888888877655433222221 222455666665432 345555555432
Q ss_pred -CCCeEEEEeCCCCccCc--CCCHHHHHHHHc
Q 014594 217 -EKPKCIFLTSPNNPDGS--IINDEDLLKILE 245 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~ 245 (422)
.+.+.++.+....+.+. ..+.+++.+..+
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLR 116 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24666665532222221 134555555444
No 483
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=26.49 E-value=3.4e+02 Score=25.41 Aligned_cols=91 Identities=10% Similarity=0.104 Sum_probs=53.5
Q ss_pred EEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHH-HHHHHhhcCCCeEEEE
Q 014594 149 ILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE-LIADAVEREKPKCIFL 224 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~-~l~~~i~~~~~~~i~l 224 (422)
+++.+|.-..+..++.+... +.+.+++... .......++..|+.+..++......-+.+ ++.+.+.+.++.++++
T Consensus 93 ~vl~Sg~gsnl~al~~~~~~~~~~~~i~~visn-~~~~~~lA~~~gIp~~~~~~~~~~~~~~~~~~~~~l~~~~~Dlivl 171 (286)
T PRK06027 93 VILVSKEDHCLGDLLWRWRSGELPVEIAAVISN-HDDLRSLVERFGIPFHHVPVTKETKAEAEARLLELIDEYQPDLVVL 171 (286)
T ss_pred EEEEcCCCCCHHHHHHHHHcCCCCcEEEEEEEc-ChhHHHHHHHhCCCEEEeccCccccchhHHHHHHHHHHhCCCEEEE
Confidence 46667777777788876544 2344333222 22333458889999988774321111222 4556566578899887
Q ss_pred eCCCCccCcCCCHHHHHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~ 244 (422)
.. .+.+++.+-+...-
T Consensus 172 ag----y~~il~~~~l~~~~ 187 (286)
T PRK06027 172 AR----YMQILSPDFVARFP 187 (286)
T ss_pred ec----chhhcCHHHHhhcc
Confidence 65 45777766665543
No 484
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=26.39 E-value=4.6e+02 Score=24.48 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=21.6
Q ss_pred CCeEEEEeCCCCccCcCCCHHHHHHHHcC---------CCeEEEccCCcc
Q 014594 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTE 258 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---------~~~li~Deay~~ 258 (422)
..++|+ ||..-+.++.+.+++. ++++++|-+..|
T Consensus 73 ~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 73 ECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred ccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 456666 7777777777666652 566777766543
No 485
>PLN02417 dihydrodipicolinate synthase
Probab=26.09 E-value=3.9e+02 Score=24.75 Aligned_cols=85 Identities=15% Similarity=0.205 Sum_probs=48.4
Q ss_pred EEEeCC---HHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 149 ILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 149 i~~~~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
|+++.| ..++++.+-.+ .+-| |.|++..|.|.....-. =.+.+++..+ .. .+++-
T Consensus 73 vi~gv~~~~t~~~i~~a~~a-~~~Gadav~~~~P~y~~~~~~~------------------i~~~f~~va~-~~-pi~lY 131 (280)
T PLN02417 73 VIGNTGSNSTREAIHATEQG-FAVGMHAALHINPYYGKTSQEG------------------LIKHFETVLD-MG-PTIIY 131 (280)
T ss_pred EEEECCCccHHHHHHHHHHH-HHcCCCEEEEcCCccCCCCHHH------------------HHHHHHHHHh-hC-CEEEE
Confidence 555554 45555555543 3344 88888888764211000 0112222222 22 45555
Q ss_pred eCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
++|. .||..++.+.+.+|++. ++.-|=|..
T Consensus 132 n~P~-~tg~~l~~~~l~~l~~~pni~giKdss 162 (280)
T PLN02417 132 NVPG-RTGQDIPPEVIFKIAQHPNFAGVKECT 162 (280)
T ss_pred EChh-HhCcCCCHHHHHHHhcCCCEEEEEeCC
Confidence 6665 38999999999999987 666666643
No 486
>PRK07478 short chain dehydrogenase; Provisional
Probab=26.01 E-value=4.7e+02 Score=23.24 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=48.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|.+|++....-...... .+..|.++..++.+- -|.+.+++.+++ .+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDV---RDEAYAKALVALAVERFGG 83 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHhcCC
Confidence 3566665555444455566788888877654333222222 222455666665432 245555554432 25
Q ss_pred CeEEEEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
.+.++.+... .+.+. ..+.+++.+..+.
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~ 114 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLAT 114 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 6666654221 12222 3355666665543
No 487
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=25.97 E-value=5.2e+02 Score=23.83 Aligned_cols=16 Identities=31% Similarity=0.329 Sum_probs=7.3
Q ss_pred CeEEEEeCCCCccCcC
Q 014594 219 PKCIFLTSPNNPDGSI 234 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~ 234 (422)
...||+.+-...||.-
T Consensus 164 ~gFiY~vs~~GvTG~~ 179 (259)
T PF00290_consen 164 SGFIYLVSRMGVTGSR 179 (259)
T ss_dssp SSEEEEESSSSSSSTT
T ss_pred CcEEEeeccCCCCCCc
Confidence 3444444444444443
No 488
>PRK05867 short chain dehydrogenase; Provisional
Probab=25.93 E-value=4.7e+02 Score=23.24 Aligned_cols=99 Identities=9% Similarity=0.068 Sum_probs=50.6
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
+...+++|.|+...-..+.+.|.+.|.+|++..-.-....... +..+.++..+..+- .|.+.+++.+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV---SQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHHHHHHh
Confidence 3345667666555555566667888888876554433332222 22355555555332 345555554432
Q ss_pred CCCeEEEEeCC-CCcc-CcCCCHHHHHHHHcC
Q 014594 217 EKPKCIFLTSP-NNPD-GSIINDEDLLKILEM 246 (422)
Q Consensus 217 ~~~~~i~l~~p-~NPt-G~~~~~e~l~~i~~~ 246 (422)
.+.+.++.+.. .++. -...+.+++.+..+.
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNT 116 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 35677665522 2211 112355666665554
No 489
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=25.80 E-value=4.2e+02 Score=24.75 Aligned_cols=88 Identities=16% Similarity=0.234 Sum_probs=49.5
Q ss_pred CEEEeCC---HHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEE
Q 014594 148 HILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCI 222 (422)
Q Consensus 148 ~i~~~~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i 222 (422)
-|+++.| ..++++++-.+ .+-| |.|++..|.|....... . .+.+++..... +..++
T Consensus 71 pvi~gv~~~~t~~ai~~a~~A-~~~Gad~v~v~pP~y~~~~~~~-l-----------------~~~f~~ia~a~~~lpv~ 131 (294)
T TIGR02313 71 PFAPGTGALNHDETLELTKFA-EEAGADAAMVIVPYYNKPNQEA-L-----------------YDHFAEVADAVPDFPII 131 (294)
T ss_pred cEEEECCcchHHHHHHHHHHH-HHcCCCEEEEcCccCCCCCHHH-H-----------------HHHHHHHHHhccCCCEE
Confidence 3554444 33555555443 3345 78888888774321100 0 12222222222 34566
Q ss_pred EEeCCCCccCcCCCHHHHHHHHc-C-CCeEEEccC
Q 014594 223 FLTSPNNPDGSIINDEDLLKILE-M-PILVVLDEA 255 (422)
Q Consensus 223 ~l~~p~NPtG~~~~~e~l~~i~~-~-~~~li~Dea 255 (422)
+-++|.. ||..++.+.+.+|++ . ++.-|=|..
T Consensus 132 iYn~P~~-tg~~l~~~~l~~L~~~~pnv~giK~ss 165 (294)
T TIGR02313 132 IYNIPGR-AAQEIAPKTMARLRKDCPNIVGAKESN 165 (294)
T ss_pred EEeCchh-cCcCCCHHHHHHHHhhCCCEEEEEeCC
Confidence 6566665 899999999999995 4 666666643
No 490
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=25.77 E-value=1.9e+02 Score=26.99 Aligned_cols=47 Identities=11% Similarity=0.124 Sum_probs=28.8
Q ss_pred cCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 198 PRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
|.+++..+|.+.+++.++ +.+.+.|+++ -++=-+..++.+|..++++
T Consensus 11 Pf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~-GstGE~~~Ls~eEr~~l~~ 60 (289)
T cd00951 11 HFDADGSFDEDAYRAHVEWLLSYGAAALFAA-GGTGEFFSLTPDEYAQVVR 60 (289)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHH
Confidence 344556778777776653 2456677644 2333456667777777765
No 491
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=25.64 E-value=3.3e+02 Score=25.41 Aligned_cols=93 Identities=20% Similarity=0.147 Sum_probs=51.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
++.+++.+..|-.+++..+-... ....+|.++.-++......+ ..|+.++-++ +++++++++++..-+.+.++
T Consensus 169 ikdNHi~~~G~i~~ai~~~r~~~-~~~~kIeVEv~tleea~ea~-~~gaDiI~LD-----n~s~e~l~~av~~~~~~~~l 241 (281)
T PRK06106 169 IKDNHIAIAGGVREAIRRARAGV-GHLVKIEVEVDTLDQLEEAL-ELGVDAVLLD-----NMTPDTLREAVAIVAGRAIT 241 (281)
T ss_pred cCHHHHHHhCcHHHHHHHHHHhC-CCCCcEEEEeCCHHHHHHHH-HcCCCEEEeC-----CCCHHHHHHHHHHhCCCceE
Confidence 34456666556666665555533 22345666666665444443 4677777775 56778888776532222222
Q ss_pred EeCCCCccCcCCCHHHHHHHHcCCCe
Q 014594 224 LTSPNNPDGSIINDEDLLKILEMPIL 249 (422)
Q Consensus 224 l~~p~NPtG~~~~~e~l~~i~~~~~~ 249 (422)
-. +|- .+.+.+.++++.|+=
T Consensus 242 ea-----SGG-I~~~ni~~yA~tGVD 261 (281)
T PRK06106 242 EA-----SGR-ITPETAPAIAASGVD 261 (281)
T ss_pred EE-----ECC-CCHHHHHHHHhcCCC
Confidence 11 221 456777787776543
No 492
>PLN02654 acetate-CoA ligase
Probab=25.60 E-value=6.4e+02 Score=26.64 Aligned_cols=66 Identities=23% Similarity=0.251 Sum_probs=42.5
Q ss_pred cCCCCEEEEcCCCchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 167 LDPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+++||.|.+.-|.-..+ ...+...|+..+.+.. .+..+++...+...++++|+.+.-....|...+
T Consensus 142 v~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~----~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~ 210 (666)
T PLN02654 142 VKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFA----GFSAESLAQRIVDCKPKVVITCNAVKRGPKTIN 210 (666)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEcCccccCCcccc
Confidence 56889988777665433 2334457777776652 456788888887778888887644333344433
No 493
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=25.58 E-value=2.7e+02 Score=25.90 Aligned_cols=38 Identities=16% Similarity=0.335 Sum_probs=27.1
Q ss_pred CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
.+..+++-++|. .||..++.+.+.+|++. ++.-|=|..
T Consensus 126 ~~~pi~iYn~P~-~tg~~ls~~~l~~L~~~~nv~giK~s~ 164 (289)
T PF00701_consen 126 TDLPIIIYNNPA-RTGNDLSPETLARLAKIPNVVGIKDSS 164 (289)
T ss_dssp SSSEEEEEEBHH-HHSSTSHHHHHHHHHTSTTEEEEEESS
T ss_pred cCCCEEEEECCC-ccccCCCHHHHHHHhcCCcEEEEEcCc
Confidence 344566645553 28999999999999998 676666654
No 494
>PRK08197 threonine synthase; Validated
Probab=25.56 E-value=6.5e+02 Score=24.67 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=53.9
Q ss_pred eEEcCCCCCCCCCCHHHHHHHh--cC--CCCCCCCCcc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCC
Q 014594 97 IVKIDANENPYGPPPEVREALG--QL--KFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP 169 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~--~~--~~~~~y~~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~ 169 (422)
.+.|..+.+|+-..+.+-+.+. ++ +.....|..+ .....-.+.+......+.|+..+++..+..++..+- ..-
T Consensus 72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~ 151 (394)
T PRK08197 72 IVSLGEGMTPLLPLPRLGKALGIGRLWVKDEGLNPTGSFKARGLAVGVSRAKELGVKHLAMPTNGNAGAAWAAYAARAGI 151 (394)
T ss_pred CCccCcCCCCceEhHHHHHHhCCCcEEEEeCCCCCCcCcHHhHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCC
Confidence 4777777777766565555442 21 1112223221 111222232222222356777777777777666643 222
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEec
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 198 (422)
.-.|+++.-.-.......+.+|++++.++
T Consensus 152 ~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~ 180 (394)
T PRK08197 152 RATIFMPADAPEITRLECALAGAELYLVD 180 (394)
T ss_pred cEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 23355554443455566777999999997
No 495
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=25.54 E-value=3.3e+02 Score=21.30 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=7.9
Q ss_pred EEEeCCHHHHHHHHHH
Q 014594 149 ILVGCGADELIDLIMR 164 (422)
Q Consensus 149 i~~~~G~~~al~~~~~ 164 (422)
++++.|.+..+..-+.
T Consensus 17 ~i~g~g~s~~~a~~~~ 32 (139)
T cd05013 17 YIFGVGSSGLVAEYLA 32 (139)
T ss_pred EEEEcCchHHHHHHHH
Confidence 4555555555444333
No 496
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=25.43 E-value=3e+02 Score=21.28 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=41.1
Q ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc---C---CCeEEEccCCc
Q 014594 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M---PILVVLDEAYT 257 (422)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---~---~~~li~Deay~ 257 (422)
....+..|.++..++. ..+.+++.+.+.+.++++|.++... ....+...++++ . ++.+++=..+.
T Consensus 21 a~~l~~~G~~v~~~d~----~~~~~~l~~~~~~~~pd~V~iS~~~-----~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDA----NVPPEELVEALRAERPDVVGISVSM-----TPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHHHHTTBEEEEEES----SB-HHHHHHHHHHTTCSEEEEEESS-----STHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHHHHCCCeEEEECC----CCCHHHHHHHHhcCCCcEEEEEccC-----cCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 3455668999988763 3456888888877899999987542 233344444443 2 67777766554
No 497
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=24.95 E-value=3.7e+02 Score=21.60 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=37.8
Q ss_pred hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 181 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
.......+..|.++.....-.+ |.+.+.+.+.+ .+..+|+++.-..++-.-+..+-++++.
T Consensus 22 ~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~~DlvittGG~g~g~~D~t~~ai~~~g 84 (133)
T cd00758 22 PALEALLEDLGCEVIYAGVVPD---DADSIRAALIEASREADLVLTTGGTGVGRRDVTPEALAELG 84 (133)
T ss_pred HHHHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhcCCEEEECCCCCCCCCcchHHHHHHhc
Confidence 3455566778998877653222 45666655532 2478888876666666666666666654
No 498
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=24.84 E-value=4e+02 Score=24.69 Aligned_cols=53 Identities=19% Similarity=0.013 Sum_probs=34.2
Q ss_pred CCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 147 DHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
..|+..+++..+..++..+- ++-.-.|+++.-.-..-....+.+|++++.++.
T Consensus 54 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45777777777776666542 222134555554445566677889999999984
No 499
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=24.68 E-value=3.1e+02 Score=25.56 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=34.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (422)
+.|+..+++..+..++..+-. -| -.|+++...-..-....+.+|++++.++.
T Consensus 60 ~~vv~aSsGN~g~alA~~a~~-~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 60 DVLIEATSGNTGIALAMIAAL-KGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CEEEEECCChHHHHHHHHHHH-cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 357777888888777766432 23 23455554445566677889999999984
No 500
>PRK06182 short chain dehydrogenase; Validated
Probab=24.62 E-value=5.3e+02 Score=23.31 Aligned_cols=94 Identities=13% Similarity=0.081 Sum_probs=48.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.++...-..+.+.+.+.|..|++..-.-...... ...+.+.+..+. -|.+.+++.+.+ .+...
T Consensus 4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDV-----TDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeC-----CCHHHHHHHHHHHHHhcCCCCE
Confidence 3566666554444555556778888887655433322222 123555555543 245555554431 35677
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++.+....+.|. ..+.+++.+..+.
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~ 104 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEV 104 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhH
Confidence 765533333332 2255666665543
Done!