Query 014594
Match_columns 422
No_of_seqs 319 out of 2771
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:23:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ffh_A Histidinol-phosphate am 100.0 1.9E-49 6.5E-54 384.8 40.4 349 68-421 7-362 (363)
2 3get_A Histidinol-phosphate am 100.0 2.5E-49 8.5E-54 384.3 36.2 347 68-421 5-363 (365)
3 1fg7_A Histidinol phosphate am 100.0 1.6E-49 5.4E-54 384.8 34.7 337 66-421 9-354 (356)
4 3ly1_A Putative histidinol-pho 100.0 1.4E-47 4.7E-52 370.4 37.5 325 93-421 14-348 (354)
5 3hdo_A Histidinol-phosphate am 100.0 2.4E-47 8.3E-52 369.8 35.9 340 66-421 5-351 (360)
6 3euc_A Histidinol-phosphate am 100.0 1.1E-46 3.8E-51 365.9 34.3 340 65-421 12-364 (367)
7 3p1t_A Putative histidinol-pho 100.0 2.3E-46 7.9E-51 359.2 33.8 317 93-421 14-333 (337)
8 1b5p_A Protein (aspartate amin 100.0 1.5E-46 5.1E-51 367.7 32.1 326 93-422 29-379 (385)
9 1lc5_A COBD, L-threonine-O-3-p 100.0 7.2E-46 2.5E-50 360.0 35.9 342 74-421 3-356 (364)
10 3ftb_A Histidinol-phosphate am 100.0 2E-45 6.8E-50 356.0 34.5 322 93-421 24-357 (361)
11 3fkd_A L-threonine-O-3-phospha 100.0 4E-45 1.4E-49 352.7 33.5 315 94-421 14-338 (350)
12 3cq5_A Histidinol-phosphate am 100.0 6.5E-45 2.2E-49 354.0 35.1 318 98-421 33-364 (369)
13 1uu1_A Histidinol-phosphate am 100.0 3.9E-45 1.3E-49 350.9 30.9 308 95-421 19-334 (335)
14 3jtx_A Aminotransferase; NP_28 100.0 1.2E-44 3.9E-49 355.2 30.9 325 92-421 27-391 (396)
15 3h14_A Aminotransferase, class 100.0 2.1E-44 7.1E-49 353.0 30.2 333 83-421 19-375 (391)
16 2dou_A Probable N-succinyldiam 100.0 6.6E-44 2.3E-48 347.6 31.6 324 93-421 23-371 (376)
17 3ezs_A Aminotransferase ASPB; 100.0 8.5E-44 2.9E-48 346.6 29.2 317 93-421 22-368 (376)
18 2x5d_A Probable aminotransfera 100.0 2.7E-43 9.2E-48 347.6 30.9 332 87-421 29-391 (412)
19 2o1b_A Aminotransferase, class 100.0 1.7E-43 5.7E-48 348.3 29.1 326 93-421 45-396 (404)
20 1o4s_A Aspartate aminotransfer 100.0 1E-42 3.4E-47 341.0 34.5 322 93-421 39-382 (389)
21 1j32_A Aspartate aminotransfer 100.0 7.2E-43 2.5E-47 341.6 32.7 348 70-421 6-380 (388)
22 1u08_A Hypothetical aminotrans 100.0 2.1E-42 7.3E-47 338.1 35.1 325 95-422 30-384 (386)
23 3b46_A Aminotransferase BNA3; 100.0 4.3E-43 1.5E-47 349.9 30.0 325 94-421 56-440 (447)
24 1gd9_A Aspartate aminotransfer 100.0 2.9E-42 9.8E-47 337.5 34.3 324 95-421 26-379 (389)
25 3ele_A Amino transferase; RER0 100.0 1.3E-42 4.3E-47 341.0 31.7 320 95-421 35-389 (398)
26 2z61_A Probable aspartate amin 100.0 7.2E-43 2.4E-47 339.5 29.6 317 93-421 27-364 (370)
27 3aow_A Putative uncharacterize 100.0 1.1E-42 3.8E-47 346.8 30.1 324 95-421 76-438 (448)
28 3dyd_A Tyrosine aminotransfera 100.0 1.9E-42 6.6E-47 343.2 30.7 326 93-421 52-417 (427)
29 3g0t_A Putative aminotransfera 100.0 1.1E-42 3.8E-47 345.6 28.1 325 94-420 43-432 (437)
30 1iay_A ACC synthase 2, 1-amino 100.0 3.5E-42 1.2E-46 341.4 31.5 323 95-419 36-421 (428)
31 3e2y_A Kynurenine-oxoglutarate 100.0 1.9E-42 6.5E-47 341.0 29.0 324 95-421 23-406 (410)
32 3fvs_A Kynurenine--oxoglutarat 100.0 1.1E-42 3.9E-47 344.0 27.3 324 95-421 28-415 (422)
33 3fdb_A Beta C-S lyase, putativ 100.0 5E-43 1.7E-47 341.1 24.2 326 89-421 17-369 (377)
34 1xi9_A Putative transaminase; 100.0 1.7E-42 5.8E-47 341.3 28.2 332 86-421 29-396 (406)
35 1c7n_A Cystalysin; transferase 100.0 7.2E-42 2.5E-46 335.7 32.1 331 88-421 24-386 (399)
36 1v2d_A Glutamine aminotransfer 100.0 7.7E-42 2.6E-46 333.6 31.1 318 96-421 26-364 (381)
37 1yiz_A Kynurenine aminotransfe 100.0 6E-42 2.1E-46 339.7 30.6 324 95-421 37-422 (429)
38 3kax_A Aminotransferase, class 100.0 2.1E-41 7.2E-46 330.2 33.2 325 94-421 23-378 (383)
39 3dzz_A Putative pyridoxal 5'-p 100.0 1.7E-41 5.9E-46 331.8 32.7 329 90-421 22-382 (391)
40 3k7y_A Aspartate aminotransfer 100.0 1.2E-41 4.1E-46 334.0 30.7 323 83-420 16-400 (405)
41 2zyj_A Alpha-aminodipate amino 100.0 9.8E-42 3.3E-46 334.7 27.5 324 95-421 32-386 (397)
42 3d6k_A Putative aminotransfera 100.0 8.2E-42 2.8E-46 338.1 26.5 321 96-419 33-412 (422)
43 2gb3_A Aspartate aminotransfer 100.0 2.8E-41 9.6E-46 332.9 30.0 346 69-421 18-395 (409)
44 3qgu_A LL-diaminopimelate amin 100.0 5.4E-42 1.8E-46 342.1 24.5 319 93-421 67-433 (449)
45 1bw0_A TAT, protein (tyrosine 100.0 2.6E-41 9E-46 333.6 29.0 324 95-421 33-406 (416)
46 2x5f_A Aspartate_tyrosine_phen 100.0 2.2E-41 7.4E-46 335.8 28.4 320 95-419 47-423 (430)
47 2r2n_A Kynurenine/alpha-aminoa 100.0 3.7E-41 1.3E-45 333.7 30.0 346 66-421 6-417 (425)
48 1d2f_A MALY protein; aminotran 100.0 7.7E-41 2.6E-45 327.5 31.6 323 95-421 28-382 (390)
49 4dq6_A Putative pyridoxal phos 100.0 1.6E-40 5.6E-45 324.8 32.6 329 86-421 25-386 (391)
50 1vp4_A Aminotransferase, putat 100.0 1.3E-41 4.5E-46 337.0 24.8 323 95-420 43-410 (425)
51 2o0r_A RV0858C (N-succinyldiam 100.0 2.8E-41 9.6E-46 333.1 26.7 323 96-421 26-389 (411)
52 3rq1_A Aminotransferase class 100.0 1.5E-40 5.1E-45 328.5 30.9 304 95-406 38-394 (418)
53 2zc0_A Alanine glyoxylate tran 100.0 7.5E-41 2.6E-45 329.3 27.6 323 94-419 33-398 (407)
54 3ei9_A LL-diaminopimelate amin 100.0 3.9E-41 1.3E-45 334.2 25.8 318 94-421 55-421 (432)
55 3nra_A Aspartate aminotransfer 100.0 1.2E-40 4.2E-45 327.6 27.8 324 95-421 39-398 (407)
56 3t18_A Aminotransferase class 100.0 1.7E-40 6E-45 327.5 28.9 318 95-420 37-409 (413)
57 3piu_A 1-aminocyclopropane-1-c 100.0 6.8E-40 2.3E-44 325.6 30.0 326 94-421 37-425 (435)
58 3l8a_A METC, putative aminotra 100.0 7.8E-40 2.7E-44 323.8 29.2 325 94-421 60-415 (421)
59 3asa_A LL-diaminopimelate amin 100.0 1.6E-40 5.6E-45 326.5 24.1 317 94-418 32-386 (400)
60 4f4e_A Aromatic-amino-acid ami 100.0 1.6E-39 5.5E-44 321.5 29.5 315 94-420 48-417 (420)
61 3op7_A Aminotransferase class 100.0 1.8E-39 6.2E-44 316.0 29.4 305 111-421 46-364 (375)
62 3ppl_A Aspartate aminotransfer 100.0 4.6E-40 1.6E-44 326.0 25.3 322 96-421 34-413 (427)
63 3fsl_A Aromatic-amino-acid ami 100.0 4.9E-39 1.7E-43 315.2 31.5 316 93-420 24-395 (397)
64 3ez1_A Aminotransferase MOCR f 100.0 1.8E-39 6.2E-44 321.3 25.3 322 96-421 26-408 (423)
65 3bwn_A AT1G70560, L-tryptophan 100.0 5.6E-40 1.9E-44 321.7 20.0 305 93-421 20-380 (391)
66 2q7w_A Aspartate aminotransfer 100.0 1.9E-38 6.4E-43 311.0 28.0 314 95-420 26-394 (396)
67 3b1d_A Betac-S lyase; HET: PLP 100.0 3.5E-42 1.2E-46 337.4 0.0 323 96-421 32-386 (392)
68 4eu1_A Mitochondrial aspartate 100.0 2.3E-38 7.9E-43 312.0 27.2 314 94-420 40-406 (409)
69 7aat_A Aspartate aminotransfer 100.0 1.6E-38 5.3E-43 312.3 25.5 326 83-420 15-398 (401)
70 2ay1_A Aroat, aromatic amino a 100.0 4E-38 1.4E-42 308.5 27.5 316 94-421 25-392 (394)
71 1ajs_A Aspartate aminotransfer 100.0 1.1E-37 3.8E-42 307.3 30.2 316 93-420 28-406 (412)
72 3meb_A Aspartate aminotransfer 100.0 6.6E-38 2.2E-42 312.5 28.2 329 79-419 32-438 (448)
73 3g7q_A Valine-pyruvate aminotr 100.0 1.6E-38 5.5E-43 313.6 22.8 321 95-421 31-406 (417)
74 3ihj_A Alanine aminotransferas 100.0 5.9E-38 2E-42 316.4 27.0 296 124-421 123-486 (498)
75 1yaa_A Aspartate aminotransfer 100.0 1.4E-37 4.8E-42 306.6 28.8 317 93-421 27-407 (412)
76 2zy4_A L-aspartate beta-decarb 100.0 1.5E-38 5E-43 323.5 21.5 319 97-419 106-516 (546)
77 2hox_A ALLIIN lyase 1; cystein 100.0 2.9E-39 1E-43 320.0 15.1 307 94-421 55-418 (427)
78 3tcm_A Alanine aminotransferas 100.0 1.8E-37 6.1E-42 313.3 27.8 295 124-418 128-487 (500)
79 4h51_A Aspartate aminotransfer 100.0 2.2E-37 7.5E-42 304.0 27.3 337 70-420 20-412 (420)
80 3f6t_A Aspartate aminotransfer 100.0 2.5E-38 8.6E-43 321.6 21.1 321 96-421 104-518 (533)
81 3if2_A Aminotransferase; YP_26 100.0 7.3E-38 2.5E-42 311.7 22.7 323 95-421 31-433 (444)
82 3a2b_A Serine palmitoyltransfe 100.0 4.1E-36 1.4E-40 294.7 28.8 316 93-419 41-386 (398)
83 1elu_A L-cysteine/L-cystine C- 100.0 2.2E-36 7.4E-41 295.4 24.2 316 96-421 16-388 (390)
84 1vjo_A Alanine--glyoxylate ami 100.0 1.2E-35 4.2E-40 290.6 27.8 311 103-420 39-390 (393)
85 1bs0_A Protein (8-amino-7-oxon 100.0 5.4E-36 1.8E-40 292.4 25.1 317 93-421 37-383 (384)
86 2dr1_A PH1308 protein, 386AA l 100.0 6.7E-35 2.3E-39 284.4 31.6 314 99-420 22-374 (386)
87 1t3i_A Probable cysteine desul 100.0 2.6E-35 9E-40 290.5 26.5 318 95-421 27-409 (420)
88 2ch1_A 3-hydroxykynurenine tra 100.0 6.7E-35 2.3E-39 285.6 27.6 315 100-420 20-378 (396)
89 1eg5_A Aminotransferase; PLP-d 100.0 5.6E-35 1.9E-39 284.6 26.4 313 98-420 3-371 (384)
90 1kmj_A Selenocysteine lyase; p 100.0 6.4E-35 2.2E-39 286.3 26.9 318 95-421 22-401 (406)
91 1iug_A Putative aspartate amin 100.0 1.3E-34 4.5E-39 278.8 26.1 307 103-420 6-343 (352)
92 3zrp_A Serine-pyruvate aminotr 100.0 5.4E-34 1.8E-38 277.6 29.4 310 102-420 6-358 (384)
93 3tqx_A 2-amino-3-ketobutyrate 100.0 4.1E-35 1.4E-39 287.3 21.3 316 94-420 42-391 (399)
94 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 7E-36 2.4E-40 289.9 15.3 313 95-420 7-365 (371)
95 2z9v_A Aspartate aminotransfer 100.0 5.6E-34 1.9E-38 278.6 28.9 316 97-420 9-366 (392)
96 1m32_A 2-aminoethylphosphonate 100.0 5.7E-34 1.9E-38 275.5 28.3 314 97-420 5-360 (366)
97 3nnk_A Ureidoglycine-glyoxylat 100.0 8.5E-34 2.9E-38 279.0 29.8 313 103-420 18-385 (411)
98 1fc4_A 2-amino-3-ketobutyrate 100.0 2.4E-34 8.1E-39 282.4 25.5 316 93-420 43-392 (401)
99 3cai_A Possible aminotransfera 100.0 2.5E-34 8.6E-39 282.5 25.5 316 96-421 26-405 (406)
100 2yrr_A Aminotransferase, class 100.0 3.6E-34 1.2E-38 275.5 25.7 309 103-420 5-348 (353)
101 2huf_A Alanine glyoxylate amin 100.0 7.9E-34 2.7E-38 277.7 27.6 315 97-420 20-378 (393)
102 3kgw_A Alanine-glyoxylate amin 100.0 8.5E-34 2.9E-38 277.1 25.8 314 102-420 27-383 (393)
103 3isl_A Purine catabolism prote 100.0 2.8E-33 9.7E-38 275.7 29.3 311 104-420 17-385 (416)
104 4hvk_A Probable cysteine desul 100.0 1.6E-33 5.6E-38 273.7 25.4 311 98-420 2-368 (382)
105 1e5e_A MGL, methionine gamma-l 100.0 4.5E-33 1.5E-37 273.7 28.5 305 98-420 21-390 (404)
106 3lvm_A Cysteine desulfurase; s 100.0 2.5E-33 8.7E-38 276.9 26.5 317 93-420 19-394 (423)
107 2w8t_A SPT, serine palmitoyltr 100.0 1.5E-33 5.2E-38 279.2 24.6 317 93-420 62-410 (427)
108 4eb5_A Probable cysteine desul 100.0 2.2E-33 7.6E-38 273.2 25.0 313 98-420 2-368 (382)
109 2eh6_A Acoat, acetylornithine 100.0 5E-34 1.7E-38 277.4 19.7 308 93-420 26-373 (375)
110 2bwn_A 5-aminolevulinate synth 100.0 1.1E-33 3.8E-38 277.6 22.2 317 94-421 45-396 (401)
111 3f9t_A TDC, L-tyrosine decarbo 100.0 9.9E-33 3.4E-37 269.6 28.5 306 107-420 40-393 (397)
112 1jg8_A L-ALLO-threonine aldola 100.0 3E-33 1E-37 269.1 23.4 311 94-420 2-341 (347)
113 3f0h_A Aminotransferase; RER07 100.0 7.9E-33 2.7E-37 269.0 25.6 311 103-420 24-369 (376)
114 3ruy_A Ornithine aminotransfer 100.0 7E-33 2.4E-37 271.1 21.1 311 91-420 32-389 (392)
115 3kki_A CAI-1 autoinducer synth 100.0 3.8E-32 1.3E-36 267.6 26.2 316 93-420 57-399 (409)
116 3i4j_A Aminotransferase, class 100.0 6.8E-33 2.3E-37 274.7 19.8 324 92-419 26-422 (430)
117 1s0a_A Adenosylmethionine-8-am 100.0 3.7E-32 1.3E-36 269.3 24.5 320 92-420 40-419 (429)
118 1sff_A 4-aminobutyrate aminotr 100.0 3.6E-33 1.2E-37 276.1 16.6 321 93-419 39-418 (426)
119 2eo5_A 419AA long hypothetical 100.0 1.3E-32 4.5E-37 271.8 20.4 314 92-419 39-412 (419)
120 2dkj_A Serine hydroxymethyltra 100.0 4.8E-32 1.6E-36 266.3 23.3 316 95-420 23-383 (407)
121 3ffr_A Phosphoserine aminotran 100.0 5.5E-32 1.9E-36 261.3 23.3 309 97-421 5-360 (362)
122 1v72_A Aldolase; PLP-dependent 100.0 3.1E-31 1E-35 255.6 27.4 312 93-420 5-348 (356)
123 1vef_A Acetylornithine/acetyl- 100.0 3.2E-32 1.1E-36 266.7 20.8 311 93-420 43-392 (395)
124 2bkw_A Alanine-glyoxylate amin 100.0 3.6E-31 1.2E-35 257.8 27.7 311 98-420 7-379 (385)
125 3a9z_A Selenocysteine lyase; P 100.0 4.1E-32 1.4E-36 269.1 20.7 315 95-420 17-423 (432)
126 3vax_A Putative uncharacterize 100.0 6.6E-33 2.2E-37 271.8 14.8 315 94-420 18-395 (400)
127 2ord_A Acoat, acetylornithine 100.0 2.7E-32 9.3E-37 267.5 18.6 310 93-420 38-392 (397)
128 4adb_A Succinylornithine trans 100.0 1.7E-31 5.9E-36 262.3 23.0 311 92-419 36-394 (406)
129 3nx3_A Acoat, acetylornithine 100.0 2.4E-31 8.2E-36 260.6 22.8 315 92-420 33-390 (395)
130 1zod_A DGD, 2,2-dialkylglycine 100.0 1.1E-31 3.7E-36 266.3 19.9 324 92-419 40-426 (433)
131 1svv_A Threonine aldolase; str 100.0 2.4E-30 8.1E-35 249.5 25.8 313 96-420 14-353 (359)
132 2oga_A Transaminase; PLP-depen 100.0 1.4E-30 4.7E-35 255.6 23.3 308 95-420 30-391 (399)
133 2c0r_A PSAT, phosphoserine ami 100.0 2.7E-31 9.3E-36 257.0 17.8 305 97-421 5-357 (362)
134 1b9h_A AHBA synthase, protein 100.0 5.5E-30 1.9E-34 250.2 27.0 304 104-420 6-383 (388)
135 3dxv_A Alpha-amino-epsilon-cap 100.0 4E-31 1.4E-35 262.7 18.6 321 92-419 40-419 (439)
136 2pb2_A Acetylornithine/succiny 100.0 1.2E-30 4.3E-35 257.7 21.8 312 92-419 54-412 (420)
137 2po3_A 4-dehydrase; external a 100.0 1.7E-30 5.7E-35 257.1 22.7 278 99-391 20-328 (424)
138 3n5m_A Adenosylmethionine-8-am 100.0 2.1E-30 7E-35 258.6 23.2 322 92-419 46-446 (452)
139 1mdo_A ARNB aminotransferase; 100.0 1E-29 3.5E-34 248.6 27.7 307 96-421 9-382 (393)
140 3gju_A Putative aminotransfera 100.0 1.4E-30 4.8E-35 260.3 21.6 321 92-419 48-450 (460)
141 3l44_A Glutamate-1-semialdehyd 100.0 1.1E-30 3.7E-35 259.2 19.7 317 91-420 51-425 (434)
142 3pj0_A LMO0305 protein; struct 100.0 6.5E-31 2.2E-35 253.9 17.1 316 96-421 14-355 (359)
143 2fyf_A PSAT, phosphoserine ami 100.0 5.7E-30 1.9E-34 251.1 23.9 307 96-420 40-393 (398)
144 1z7d_A Ornithine aminotransfer 100.0 3.4E-30 1.2E-34 255.5 22.3 314 91-419 61-423 (433)
145 4a6r_A Omega transaminase; tra 100.0 2.6E-30 8.9E-35 258.3 21.6 319 92-419 47-443 (459)
146 1w23_A Phosphoserine aminotran 100.0 6.9E-31 2.4E-35 253.7 16.4 305 97-420 4-355 (360)
147 1qz9_A Kynureninase; kynurenin 100.0 7.1E-30 2.4E-34 251.6 23.3 305 95-420 27-397 (416)
148 2rfv_A Methionine gamma-lyase; 100.0 1.9E-29 6.4E-34 247.5 26.2 280 127-421 62-396 (398)
149 1ibj_A CBL, cystathionine beta 100.0 4.2E-30 1.4E-34 256.2 21.0 310 95-420 89-457 (464)
150 2oat_A Ornithine aminotransfer 100.0 1.6E-29 5.6E-34 251.0 24.9 314 91-419 72-433 (439)
151 3a8u_X Omega-amino acid--pyruv 100.0 4.6E-30 1.6E-34 255.8 20.9 318 93-419 48-441 (449)
152 2ez2_A Beta-tyrosinase, tyrosi 100.0 5.9E-29 2E-33 248.2 28.9 314 95-419 42-425 (456)
153 2aeu_A Hypothetical protein MJ 100.0 3.5E-30 1.2E-34 250.5 18.6 304 96-420 29-366 (374)
154 1cs1_A CGS, protein (cystathio 100.0 1.5E-28 5E-33 240.1 28.9 280 124-421 47-383 (386)
155 3tfu_A Adenosylmethionine-8-am 100.0 1.1E-29 3.8E-34 253.4 20.3 319 93-420 71-448 (457)
156 3k28_A Glutamate-1-semialdehyd 100.0 1.9E-30 6.6E-35 257.1 14.7 317 92-419 50-421 (429)
157 3dod_A Adenosylmethionine-8-am 100.0 1.7E-29 5.8E-34 251.7 19.8 319 92-420 41-435 (448)
158 3ndn_A O-succinylhomoserine su 100.0 5.5E-29 1.9E-33 245.0 23.0 279 125-420 77-411 (414)
159 4ffc_A 4-aminobutyrate aminotr 100.0 1.4E-29 4.8E-34 252.5 18.2 323 91-420 60-441 (453)
160 3lws_A Aromatic amino acid bet 100.0 3.8E-29 1.3E-33 241.4 20.1 286 124-421 41-352 (357)
161 3n0l_A Serine hydroxymethyltra 100.0 2.9E-28 9.8E-33 240.1 26.8 315 96-420 26-384 (417)
162 2fnu_A Aminotransferase; prote 100.0 1.1E-28 3.8E-33 239.5 22.3 297 109-420 11-367 (375)
163 3hmu_A Aminotransferase, class 100.0 2.1E-29 7.1E-34 252.3 16.9 322 91-420 51-447 (472)
164 1pff_A Methionine gamma-lyase; 100.0 1.7E-27 5.9E-32 227.4 28.5 269 133-420 2-329 (331)
165 1wyu_B Glycine dehydrogenase s 100.0 1.4E-27 4.9E-32 239.4 28.6 316 96-420 67-436 (474)
166 3fq8_A Glutamate-1-semialdehyd 100.0 1.8E-28 6.1E-33 242.7 21.2 316 92-420 49-422 (427)
167 3oks_A 4-aminobutyrate transam 100.0 4.6E-29 1.6E-33 248.7 16.9 324 91-421 57-444 (451)
168 3acz_A Methionine gamma-lyase; 100.0 9.6E-27 3.3E-31 227.5 33.0 274 125-418 55-382 (389)
169 2vi8_A Serine hydroxymethyltra 100.0 1.1E-28 3.9E-33 242.0 19.3 315 95-420 24-382 (405)
170 2e7u_A Glutamate-1-semialdehyd 100.0 1.2E-28 4.1E-33 243.7 19.4 312 92-420 49-422 (424)
171 3e9k_A Kynureninase; kynurenin 100.0 2.4E-28 8.3E-33 244.5 21.4 280 131-420 113-456 (465)
172 3cog_A Cystathionine gamma-lya 100.0 7.7E-28 2.6E-32 236.2 24.4 278 124-420 62-397 (403)
173 2epj_A Glutamate-1-semialdehyd 100.0 5E-29 1.7E-33 247.2 15.9 312 92-419 53-425 (434)
174 3qhx_A Cystathionine gamma-syn 100.0 2.6E-27 8.9E-32 231.7 27.8 270 125-410 62-380 (392)
175 3gbx_A Serine hydroxymethyltra 100.0 8.7E-28 3E-32 236.8 24.0 316 96-420 31-391 (420)
176 2dgk_A GAD-beta, GADB, glutama 100.0 2.7E-27 9.3E-32 236.0 27.7 309 108-420 53-429 (452)
177 3mad_A Sphingosine-1-phosphate 100.0 4.8E-28 1.6E-32 245.4 22.5 281 133-420 143-464 (514)
178 4e77_A Glutamate-1-semialdehyd 100.0 6.2E-28 2.1E-32 239.0 22.7 320 91-420 49-424 (429)
179 2c81_A Glutamine-2-deoxy-scyll 100.0 7E-27 2.4E-31 230.6 30.0 303 104-421 8-410 (418)
180 3dr4_A Putative perosamine syn 100.0 2.8E-28 9.4E-33 238.5 19.6 311 95-421 22-389 (391)
181 3ecd_A Serine hydroxymethyltra 100.0 4.1E-27 1.4E-31 232.3 28.1 316 96-420 33-392 (425)
182 1qgn_A Protein (cystathionine 100.0 1E-27 3.4E-32 237.4 23.1 277 127-420 112-440 (445)
183 3i5t_A Aminotransferase; pyrid 100.0 8.3E-28 2.9E-32 241.0 22.6 320 91-419 50-448 (476)
184 1gc0_A Methionine gamma-lyase; 100.0 6.7E-27 2.3E-31 229.3 28.4 279 125-421 61-397 (398)
185 1rv3_A Serine hydroxymethyltra 100.0 1.7E-27 5.9E-32 239.1 23.0 317 95-420 44-426 (483)
186 2cb1_A O-acetyl homoserine sul 100.0 5.8E-26 2E-30 223.7 33.3 295 105-419 30-410 (412)
187 3mc6_A Sphingosine-1-phosphate 100.0 2.2E-27 7.4E-32 239.5 23.6 282 133-420 111-432 (497)
188 3uwc_A Nucleotide-sugar aminot 100.0 1.6E-27 5.4E-32 231.4 20.7 305 96-420 7-366 (374)
189 1o69_A Aminotransferase; struc 100.0 6.3E-27 2.2E-31 229.2 25.1 297 111-421 12-383 (394)
190 2cy8_A D-phgat, D-phenylglycin 100.0 1.1E-27 3.7E-32 239.0 18.4 308 92-419 54-429 (453)
191 1n8p_A Cystathionine gamma-lya 100.0 3.6E-27 1.2E-31 230.8 21.3 279 125-421 51-391 (393)
192 3hbx_A GAD 1, glutamate decarb 100.0 1.1E-26 3.8E-31 234.3 25.2 312 107-420 66-439 (502)
193 1ax4_A Tryptophanase; tryptoph 99.9 1.1E-25 3.7E-30 225.2 30.6 316 95-420 43-436 (467)
194 2cjg_A L-lysine-epsilon aminot 99.9 7.7E-28 2.6E-32 239.7 14.6 316 92-419 51-442 (449)
195 3nyt_A Aminotransferase WBPE; 99.9 2.6E-26 8.8E-31 222.6 23.7 295 110-421 15-360 (367)
196 3h7f_A Serine hydroxymethyltra 99.9 8.4E-26 2.9E-30 224.9 27.6 316 96-420 46-409 (447)
197 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.2E-26 2.5E-30 224.7 26.5 312 94-421 30-432 (437)
198 3frk_A QDTB; aminotransferase, 99.9 1.9E-26 6.4E-31 224.0 20.7 294 110-421 16-364 (373)
199 3ri6_A O-acetylhomoserine sulf 99.9 1.2E-25 4.2E-30 221.7 26.7 279 125-420 78-427 (430)
200 3ju7_A Putative PLP-dependent 99.9 1.6E-25 5.3E-30 217.9 26.6 309 100-420 5-370 (377)
201 2fq6_A Cystathionine beta-lyas 99.9 1.3E-25 4.5E-30 220.7 22.9 279 126-420 79-413 (415)
202 3i16_A Aluminum resistance pro 99.9 1.1E-25 3.8E-30 221.1 20.0 267 111-385 46-355 (427)
203 2z67_A O-phosphoseryl-tRNA(SEC 99.9 7.5E-25 2.6E-29 218.5 25.3 283 132-421 136-454 (456)
204 3nmy_A Xometc, cystathionine g 99.9 1.4E-24 4.6E-29 212.6 24.7 278 124-419 62-393 (400)
205 3jzl_A Putative cystathionine 99.9 3E-25 1E-29 217.2 19.3 265 111-386 32-339 (409)
206 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.8E-25 6E-30 222.3 16.6 275 126-421 54-349 (446)
207 3hvy_A Cystathionine beta-lyas 99.9 6.3E-25 2.1E-29 215.7 20.1 264 111-385 47-355 (427)
208 2oqx_A Tryptophanase; lyase, p 99.9 9.3E-25 3.2E-29 218.4 20.7 315 96-421 42-435 (467)
209 1wyu_A Glycine dehydrogenase ( 99.9 1.2E-24 4.1E-29 216.0 21.3 310 98-421 67-436 (438)
210 3b8x_A WBDK, pyridoxamine 5-ph 99.9 8.6E-23 2.9E-27 199.4 32.4 298 109-421 13-389 (390)
211 2ctz_A O-acetyl-L-homoserine s 99.9 4.4E-24 1.5E-28 210.8 23.0 277 127-420 56-418 (421)
212 2okj_A Glutamate decarboxylase 99.9 9.5E-24 3.2E-28 213.2 23.9 286 133-420 136-497 (504)
213 3ke3_A Putative serine-pyruvat 99.9 8.2E-24 2.8E-28 206.0 21.9 280 131-420 37-371 (379)
214 2a7v_A Serine hydroxymethyltra 99.9 3E-23 1E-27 207.0 24.8 317 96-420 55-436 (490)
215 2yky_A Beta-transaminase; tran 99.8 3.3E-26 1.1E-30 227.0 0.0 293 91-393 96-433 (465)
216 2qma_A Diaminobutyrate-pyruvat 99.9 4.8E-23 1.6E-27 207.7 20.4 309 109-420 112-491 (497)
217 1js3_A DDC;, DOPA decarboxylas 99.9 5.6E-23 1.9E-27 206.7 20.3 305 111-420 88-469 (486)
218 1ohv_A 4-aminobutyrate aminotr 99.9 9.8E-24 3.3E-28 211.2 14.4 319 91-420 59-463 (472)
219 2jis_A Cysteine sulfinic acid 99.9 1.4E-22 4.9E-27 205.1 22.5 287 132-420 151-510 (515)
220 3ht4_A Aluminum resistance pro 99.9 3.6E-23 1.2E-27 204.1 17.4 265 111-385 38-344 (431)
221 3vp6_A Glutamate decarboxylase 99.9 6.5E-22 2.2E-26 199.8 26.0 296 124-421 125-501 (511)
222 1c4k_A Protein (ornithine deca 99.9 4.1E-22 1.4E-26 207.3 23.9 287 127-421 171-562 (730)
223 3e77_A Phosphoserine aminotran 99.9 1.5E-21 5.1E-26 188.3 19.4 301 104-421 19-371 (377)
224 2vyc_A Biodegradative arginine 99.9 8.5E-21 2.9E-25 199.1 25.5 287 127-421 203-601 (755)
225 4e1o_A HDC, histidine decarbox 99.9 8.2E-21 2.8E-25 190.5 21.2 294 124-420 108-473 (481)
226 3m5u_A Phosphoserine aminotran 99.9 3E-20 1E-24 178.6 22.0 303 96-421 5-356 (361)
227 3qm2_A Phosphoserine aminotran 99.9 3.5E-21 1.2E-25 186.8 14.9 300 105-421 34-381 (386)
228 3k40_A Aromatic-L-amino-acid d 99.8 3.9E-20 1.3E-24 185.2 20.5 294 124-420 103-466 (475)
229 3n75_A LDC, lysine decarboxyla 99.8 7.6E-18 2.6E-22 173.9 26.7 286 127-421 193-556 (715)
230 4ao9_A Beta-phenylalanine amin 99.7 9.8E-17 3.4E-21 158.1 18.7 314 91-420 83-441 (454)
231 4atq_A 4-aminobutyrate transam 99.7 3.9E-16 1.3E-20 154.3 21.0 324 91-420 60-447 (456)
232 4e3q_A Pyruvate transaminase; 99.7 7.1E-15 2.4E-19 145.9 21.1 319 91-418 63-461 (473)
233 3ou5_A Serine hydroxymethyltra 99.6 2E-14 6.9E-19 138.0 21.7 312 97-420 56-436 (490)
234 4a0g_A Adenosylmethionine-8-am 99.6 7.8E-16 2.7E-20 162.7 11.4 315 96-419 381-822 (831)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 9.3E-12 3.2E-16 121.5 26.2 220 133-353 102-338 (450)
236 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 5E-12 1.7E-16 122.1 14.1 243 143-387 130-400 (501)
237 4g81_D Putative hexonate dehyd 69.5 39 0.0013 29.7 10.6 102 142-246 5-116 (255)
238 4fgs_A Probable dehydrogenase 69.2 27 0.00092 31.1 9.6 97 147-246 30-133 (273)
239 3rwb_A TPLDH, pyridoxal 4-dehy 68.7 40 0.0014 29.1 10.6 97 147-246 7-110 (247)
240 4dqx_A Probable oxidoreductase 64.7 34 0.0011 30.3 9.4 101 143-246 24-131 (277)
241 3n74_A 3-ketoacyl-(acyl-carrie 63.6 37 0.0013 29.5 9.4 98 146-246 9-114 (261)
242 4fn4_A Short chain dehydrogena 63.5 51 0.0017 28.9 10.2 97 146-246 7-115 (254)
243 3ppi_A 3-hydroxyacyl-COA dehyd 59.1 49 0.0017 29.1 9.5 98 146-246 30-139 (281)
244 4e6p_A Probable sorbitol dehyd 59.0 46 0.0016 28.9 9.1 98 146-246 8-112 (259)
245 3m1a_A Putative dehydrogenase; 56.2 46 0.0016 29.3 8.7 96 148-246 7-109 (281)
246 3grp_A 3-oxoacyl-(acyl carrier 55.7 62 0.0021 28.3 9.5 101 143-246 24-131 (266)
247 3gem_A Short chain dehydrogena 55.6 52 0.0018 28.7 8.9 99 143-246 24-128 (260)
248 3l6e_A Oxidoreductase, short-c 55.1 62 0.0021 27.6 9.2 96 148-246 5-107 (235)
249 3gvc_A Oxidoreductase, probabl 54.8 44 0.0015 29.6 8.3 97 147-246 30-133 (277)
250 3gaf_A 7-alpha-hydroxysteroid 54.0 64 0.0022 27.9 9.2 100 144-246 10-118 (256)
251 4eso_A Putative oxidoreductase 53.8 70 0.0024 27.7 9.4 98 146-246 8-112 (255)
252 3rd5_A Mypaa.01249.C; ssgcid, 53.0 31 0.0011 30.6 7.1 79 144-225 14-93 (291)
253 3tpc_A Short chain alcohol deh 52.7 45 0.0015 28.9 8.0 98 146-246 7-115 (257)
254 2o23_A HADH2 protein; HSD17B10 52.3 79 0.0027 27.2 9.6 100 144-246 10-122 (265)
255 3op4_A 3-oxoacyl-[acyl-carrier 51.5 75 0.0026 27.3 9.2 100 144-246 7-113 (248)
256 3pxx_A Carveol dehydrogenase; 51.4 51 0.0018 28.9 8.3 97 147-246 11-127 (287)
257 3l77_A Short-chain alcohol deh 50.2 99 0.0034 26.0 9.7 96 148-246 4-110 (235)
258 4dyv_A Short-chain dehydrogena 50.2 62 0.0021 28.4 8.5 96 148-246 30-133 (272)
259 4gkb_A 3-oxoacyl-[acyl-carrier 49.6 1.2E+02 0.004 26.5 10.2 136 144-289 5-149 (258)
260 3h7a_A Short chain dehydrogena 49.4 1.1E+02 0.0037 26.4 9.9 97 147-246 8-113 (252)
261 4ibo_A Gluconate dehydrogenase 47.9 1.4E+02 0.0048 26.0 10.9 102 142-246 22-133 (271)
262 3guy_A Short-chain dehydrogena 47.5 37 0.0013 28.8 6.4 96 148-246 3-102 (230)
263 3f9i_A 3-oxoacyl-[acyl-carrier 47.4 70 0.0024 27.3 8.3 78 145-225 13-91 (249)
264 1vl8_A Gluconate 5-dehydrogena 46.7 1.3E+02 0.0045 26.1 10.1 100 144-246 19-129 (267)
265 3r1i_A Short-chain type dehydr 46.6 1.2E+02 0.0042 26.4 10.0 103 141-246 27-139 (276)
266 3uf0_A Short-chain dehydrogena 46.4 1E+02 0.0035 27.0 9.4 102 142-246 27-136 (273)
267 4hp8_A 2-deoxy-D-gluconate 3-d 46.4 55 0.0019 28.6 7.3 101 142-246 5-109 (247)
268 4egf_A L-xylulose reductase; s 45.1 1.4E+02 0.0049 25.7 10.1 105 142-246 16-128 (266)
269 4fc7_A Peroxisomal 2,4-dienoyl 45.1 1.6E+02 0.0053 25.7 11.1 97 147-246 28-135 (277)
270 2ew8_A (S)-1-phenylethanol deh 44.9 1.5E+02 0.005 25.3 11.1 97 147-246 8-112 (249)
271 3sju_A Keto reductase; short-c 44.7 1.5E+02 0.0052 25.8 10.3 97 147-246 25-131 (279)
272 3tsc_A Putative oxidoreductase 44.7 1.2E+02 0.004 26.5 9.6 97 147-246 12-131 (277)
273 1fmc_A 7 alpha-hydroxysteroid 44.6 1.4E+02 0.0049 25.2 10.6 100 144-246 9-117 (255)
274 3sc4_A Short chain dehydrogena 44.3 1.6E+02 0.0056 25.7 10.7 99 145-246 8-123 (285)
275 3lyl_A 3-oxoacyl-(acyl-carrier 44.0 1.5E+02 0.005 25.1 10.3 97 147-246 6-112 (247)
276 3tzq_B Short-chain type dehydr 44.0 94 0.0032 27.1 8.7 97 147-246 12-117 (271)
277 3rih_A Short chain dehydrogena 43.9 1.7E+02 0.0058 25.9 10.5 101 143-246 38-149 (293)
278 3tfo_A Putative 3-oxoacyl-(acy 43.8 1.6E+02 0.0055 25.5 10.7 96 148-246 6-111 (264)
279 3nyw_A Putative oxidoreductase 43.2 1E+02 0.0035 26.5 8.8 97 147-246 8-116 (250)
280 1hxh_A 3BETA/17BETA-hydroxyste 42.8 1.6E+02 0.0054 25.2 10.6 97 147-246 7-110 (253)
281 1hdc_A 3-alpha, 20 beta-hydrox 42.0 1.3E+02 0.0045 25.8 9.3 97 147-246 6-109 (254)
282 2wsb_A Galactitol dehydrogenas 41.8 1.6E+02 0.0055 24.9 10.1 98 146-246 11-115 (254)
283 3ged_A Short-chain dehydrogena 41.6 1.3E+02 0.0043 26.2 9.0 95 148-246 4-105 (247)
284 3rkr_A Short chain oxidoreduct 41.5 1.7E+02 0.0058 25.1 10.6 98 146-246 29-137 (262)
285 3ai3_A NADPH-sorbose reductase 41.3 1.7E+02 0.0058 25.1 10.1 97 147-246 8-115 (263)
286 3ak4_A NADH-dependent quinucli 40.9 1.2E+02 0.0042 26.0 9.0 100 144-246 10-116 (263)
287 3tjr_A Short chain dehydrogena 40.7 1.6E+02 0.0055 26.1 9.9 99 145-246 30-138 (301)
288 1ywx_A 30S ribosomal protein S 40.2 27 0.00092 26.0 3.6 26 127-152 28-53 (102)
289 1xn9_A 30S ribosomal protein S 40.2 28 0.00097 25.8 3.7 26 127-152 28-53 (101)
290 4dmm_A 3-oxoacyl-[acyl-carrier 39.9 1.1E+02 0.0037 26.7 8.4 100 144-246 26-136 (269)
291 3uve_A Carveol dehydrogenase ( 39.6 1.3E+02 0.0045 26.3 9.1 98 146-246 11-135 (286)
292 3zv4_A CIS-2,3-dihydrobiphenyl 39.5 78 0.0027 27.8 7.5 77 146-225 5-86 (281)
293 3gdg_A Probable NADP-dependent 39.3 1.4E+02 0.0049 25.6 9.1 102 142-246 16-131 (267)
294 3gi1_A LBP, laminin-binding pr 39.3 1.8E+02 0.0062 25.7 9.9 77 169-255 178-260 (286)
295 3sx2_A Putative 3-ketoacyl-(ac 39.0 1.3E+02 0.0046 26.0 9.0 96 146-246 13-128 (278)
296 3qiv_A Short-chain dehydrogena 38.4 1.7E+02 0.0057 24.9 9.4 99 145-246 8-119 (253)
297 2ae2_A Protein (tropinone redu 38.2 1.9E+02 0.0065 24.7 11.0 98 146-246 9-117 (260)
298 3v2h_A D-beta-hydroxybutyrate 38.0 1.9E+02 0.0066 25.2 9.9 100 144-246 23-134 (281)
299 2jah_A Clavulanic acid dehydro 37.5 1.9E+02 0.0065 24.6 10.6 97 147-246 8-114 (247)
300 3qlj_A Short chain dehydrogena 37.5 1.6E+02 0.0053 26.4 9.3 97 147-246 28-144 (322)
301 1ae1_A Tropinone reductase-I; 37.5 2E+02 0.0069 24.8 10.9 100 144-246 19-129 (273)
302 4h1h_A LMO1638 protein; MCCF-l 37.4 1.2E+02 0.0041 27.6 8.4 80 167-246 9-106 (327)
303 1nff_A Putative oxidoreductase 37.2 1.8E+02 0.0063 24.9 9.5 97 147-246 8-111 (260)
304 1geg_A Acetoin reductase; SDR 37.1 1.8E+02 0.0062 24.8 9.4 96 148-246 4-109 (256)
305 4imr_A 3-oxoacyl-(acyl-carrier 37.1 2E+02 0.0069 25.0 9.8 105 142-246 29-139 (275)
306 1uls_A Putative 3-oxoacyl-acyl 37.1 1.9E+02 0.0066 24.5 10.4 95 147-246 6-107 (245)
307 3ijr_A Oxidoreductase, short c 37.0 2.2E+02 0.0074 25.0 10.5 98 146-246 47-156 (291)
308 3e03_A Short chain dehydrogena 36.9 2.1E+02 0.0071 24.8 11.0 99 145-246 5-120 (274)
309 3is3_A 17BETA-hydroxysteroid d 36.7 1.2E+02 0.004 26.4 8.1 97 147-246 19-126 (270)
310 3ucx_A Short chain dehydrogena 36.0 1.7E+02 0.0058 25.2 9.1 97 147-246 12-119 (264)
311 2cfc_A 2-(R)-hydroxypropyl-COM 35.6 1.5E+02 0.0053 25.0 8.7 96 148-246 4-113 (250)
312 3t7c_A Carveol dehydrogenase; 35.4 2.3E+02 0.0079 24.9 11.2 99 145-246 27-148 (299)
313 3v8b_A Putative dehydrogenase, 35.4 2.3E+02 0.0077 24.8 10.2 101 143-246 25-136 (283)
314 3oid_A Enoyl-[acyl-carrier-pro 35.2 2.1E+02 0.0073 24.5 9.9 96 148-246 6-112 (258)
315 1xq1_A Putative tropinone redu 35.2 2.1E+02 0.0072 24.4 10.0 97 147-246 15-122 (266)
316 1w6u_A 2,4-dienoyl-COA reducta 35.0 2.1E+02 0.0073 25.0 9.8 97 147-246 27-134 (302)
317 3v2g_A 3-oxoacyl-[acyl-carrier 34.7 2.3E+02 0.0077 24.6 10.6 101 143-246 28-139 (271)
318 2a4k_A 3-oxoacyl-[acyl carrier 34.7 1.6E+02 0.0055 25.4 8.7 97 147-246 7-110 (263)
319 1x1t_A D(-)-3-hydroxybutyrate 34.5 2.2E+02 0.0074 24.3 10.7 96 148-246 6-113 (260)
320 1iy8_A Levodione reductase; ox 34.0 2.3E+02 0.0077 24.4 9.7 98 146-246 13-123 (267)
321 3imf_A Short chain dehydrogena 33.8 2.2E+02 0.0077 24.3 9.9 96 148-246 8-113 (257)
322 3auf_A Glycinamide ribonucleot 33.8 2.2E+02 0.0077 24.3 9.3 88 149-243 26-122 (229)
323 3osu_A 3-oxoacyl-[acyl-carrier 33.6 1.6E+02 0.0056 25.0 8.5 96 148-246 6-112 (246)
324 1yb1_A 17-beta-hydroxysteroid 33.5 1.9E+02 0.0065 25.0 9.0 99 144-245 29-137 (272)
325 2c07_A 3-oxoacyl-(acyl-carrier 33.4 2.4E+02 0.0082 24.5 11.4 97 147-246 45-151 (285)
326 2v94_A RPS24, 30S ribosomal pr 33.3 30 0.001 26.0 2.9 26 127-152 37-62 (107)
327 3pgx_A Carveol dehydrogenase; 33.1 2E+02 0.007 24.9 9.2 98 146-246 15-135 (280)
328 3o38_A Short chain dehydrogena 32.4 1.9E+02 0.0064 24.8 8.8 99 145-246 21-131 (266)
329 3s55_A Putative short-chain de 32.4 2.5E+02 0.0084 24.3 10.5 98 146-246 10-129 (281)
330 3kvo_A Hydroxysteroid dehydrog 32.2 2.9E+02 0.0099 25.1 11.3 97 146-245 45-158 (346)
331 3tox_A Short chain dehydrogena 31.9 2.6E+02 0.0088 24.4 10.8 97 147-246 9-116 (280)
332 3oec_A Carveol dehydrogenase ( 31.8 1.6E+02 0.0055 26.3 8.4 98 146-246 46-165 (317)
333 2rhc_B Actinorhodin polyketide 31.7 2.5E+02 0.0087 24.3 10.4 98 146-246 22-129 (277)
334 3a28_C L-2.3-butanediol dehydr 31.7 2E+02 0.0069 24.5 8.8 96 148-246 4-111 (258)
335 3gnn_A Nicotinate-nucleotide p 31.6 1.4E+02 0.0048 26.9 7.6 90 145-248 186-275 (298)
336 3i1j_A Oxidoreductase, short c 31.2 2.2E+02 0.0077 23.9 9.0 97 147-246 15-125 (247)
337 3r3s_A Oxidoreductase; structu 30.9 2.7E+02 0.0093 24.4 10.9 98 146-246 49-159 (294)
338 2g1d_A 30S ribosomal protein S 30.4 27 0.00094 25.7 2.2 26 127-152 29-54 (98)
339 2uvd_A 3-oxoacyl-(acyl-carrier 30.1 2.5E+02 0.0085 23.7 9.3 96 148-246 6-112 (246)
340 3pk0_A Short-chain dehydrogena 30.0 2.3E+02 0.0079 24.3 8.9 99 145-246 9-118 (262)
341 3tha_A Tryptophan synthase alp 29.9 2.8E+02 0.0095 24.2 10.0 26 171-196 118-146 (252)
342 3ftp_A 3-oxoacyl-[acyl-carrier 29.6 2.3E+02 0.0079 24.5 8.9 97 147-246 29-135 (270)
343 3tqv_A Nicotinate-nucleotide p 29.5 1.6E+02 0.0053 26.4 7.5 90 145-248 175-264 (287)
344 3ksu_A 3-oxoacyl-acyl carrier 29.4 2.7E+02 0.0092 23.9 11.3 101 143-246 8-121 (262)
345 3lf2_A Short chain oxidoreduct 29.2 2.7E+02 0.0093 23.8 11.1 100 144-246 6-117 (265)
346 2xhz_A KDSD, YRBH, arabinose 5 29.1 2E+02 0.0069 23.0 7.9 45 133-178 37-83 (183)
347 3asu_A Short-chain dehydrogena 29.1 2.2E+02 0.0076 24.2 8.6 95 149-246 3-105 (248)
348 3t4x_A Oxidoreductase, short c 29.1 2.7E+02 0.0094 23.8 10.5 97 147-246 11-115 (267)
349 3f1l_A Uncharacterized oxidore 29.0 2.7E+02 0.0091 23.7 9.2 99 147-246 13-123 (252)
350 3rku_A Oxidoreductase YMR226C; 28.8 2.4E+02 0.0081 24.8 8.8 97 147-246 34-146 (287)
351 3l4b_C TRKA K+ channel protien 28.6 2.5E+02 0.0086 23.2 8.8 74 148-228 2-75 (218)
352 3cxt_A Dehydrogenase with diff 28.4 3E+02 0.01 24.1 10.1 100 144-246 32-141 (291)
353 3tla_A MCCF; serine protease, 27.9 1.7E+02 0.006 27.1 7.9 79 167-245 40-136 (371)
354 2pnf_A 3-oxoacyl-[acyl-carrier 27.7 2.7E+02 0.0092 23.3 9.3 97 147-246 8-115 (248)
355 1spx_A Short-chain reductase f 27.7 1.8E+02 0.0063 25.1 7.9 75 148-225 8-93 (278)
356 4e5s_A MCCFLIKE protein (BA_56 27.3 2.1E+02 0.0073 26.0 8.3 79 167-245 9-105 (331)
357 2hmc_A AGR_L_411P, dihydrodipi 27.3 2.4E+02 0.0082 25.8 8.7 86 148-255 94-188 (344)
358 1vhx_A Putative holliday junct 27.2 90 0.0031 24.8 5.0 56 203-258 40-102 (150)
359 3ezl_A Acetoacetyl-COA reducta 27.2 2.1E+02 0.007 24.3 8.0 97 147-246 14-121 (256)
360 3edm_A Short chain dehydrogena 26.8 3E+02 0.01 23.5 10.7 99 145-246 7-117 (259)
361 2q5c_A NTRC family transcripti 26.6 2.4E+02 0.0084 23.3 8.0 106 128-247 13-119 (196)
362 3awd_A GOX2181, putative polyo 26.5 2.9E+02 0.0099 23.3 11.1 100 144-246 11-121 (260)
363 3av3_A Phosphoribosylglycinami 26.3 2.9E+02 0.0099 23.2 8.9 88 150-243 8-103 (212)
364 3u9l_A 3-oxoacyl-[acyl-carrier 26.2 2.8E+02 0.0095 24.9 9.0 96 148-246 7-117 (324)
365 2xzm_P RPS24E; ribosome, trans 26.1 44 0.0015 26.6 2.9 26 127-152 31-56 (149)
366 1zk4_A R-specific alcohol dehy 25.8 2.9E+02 0.01 23.1 10.1 97 147-246 7-112 (251)
367 4b79_A PA4098, probable short- 25.7 1.5E+02 0.0052 25.6 6.7 93 147-246 12-106 (242)
368 2ywr_A Phosphoribosylglycinami 25.6 3E+02 0.01 23.1 8.7 87 149-241 5-99 (216)
369 1xkq_A Short-chain reductase f 25.5 3.2E+02 0.011 23.5 9.1 97 147-246 7-120 (280)
370 1ry2_A Acetyl-coenzyme A synth 25.5 3.4E+02 0.012 27.1 10.3 68 168-239 137-207 (663)
371 1jr2_A Uroporphyrinogen-III sy 25.5 92 0.0032 27.5 5.4 86 141-228 130-220 (286)
372 4iin_A 3-ketoacyl-acyl carrier 25.3 3.2E+02 0.011 23.4 10.7 100 144-246 27-137 (271)
373 3kzv_A Uncharacterized oxidore 25.0 2.5E+02 0.0085 23.9 8.1 95 149-246 5-109 (254)
374 1zem_A Xylitol dehydrogenase; 25.0 3.2E+02 0.011 23.3 9.8 97 147-246 8-115 (262)
375 3vc3_A Beta-cyanoalnine syntha 25.0 52 0.0018 30.3 3.7 83 148-231 89-172 (344)
376 3h5d_A DHDPS, dihydrodipicolin 24.9 2.7E+02 0.0091 25.0 8.4 85 148-255 78-171 (311)
377 1xhl_A Short-chain dehydrogena 24.8 3.4E+02 0.012 23.8 9.1 100 144-246 24-138 (297)
378 4had_A Probable oxidoreductase 24.8 1.9E+02 0.0065 26.1 7.6 90 150-256 28-119 (350)
379 3u5c_Y RP50, 40S ribosomal pro 24.3 41 0.0014 26.3 2.3 26 127-152 33-58 (135)
380 3eb2_A Putative dihydrodipicol 24.3 3.5E+02 0.012 24.0 9.1 84 149-255 76-167 (300)
381 1iv0_A Hypothetical protein; r 24.2 1.3E+02 0.0045 21.9 5.1 55 203-257 36-96 (98)
382 3n0v_A Formyltetrahydrofolate 23.5 1.4E+02 0.0047 26.7 6.1 91 149-244 94-188 (286)
383 2ojp_A DHDPS, dihydrodipicolin 23.4 3.8E+02 0.013 23.6 10.2 82 148-253 72-162 (292)
384 3ujp_A Mn transporter subunit; 23.2 2.3E+02 0.0078 25.5 7.6 71 170-250 190-265 (307)
385 1meo_A Phosophoribosylglycinam 22.8 3.4E+02 0.012 22.7 8.7 88 150-243 5-100 (209)
386 3afn_B Carbonyl reductase; alp 22.7 3.4E+02 0.012 22.7 9.3 96 147-245 8-115 (258)
387 1wzu_A Quinolinate synthetase 22.6 92 0.0031 28.1 4.6 76 148-230 121-200 (300)
388 3re1_A Uroporphyrinogen-III sy 22.6 57 0.0019 28.7 3.3 60 169-228 13-76 (269)
389 3r44_A Fatty acyl COA syntheta 22.6 3.4E+02 0.012 26.0 9.4 72 149-225 175-265 (517)
390 1ja9_A 4HNR, 1,3,6,8-tetrahydr 22.5 3.5E+02 0.012 22.9 8.7 96 147-245 22-128 (274)
391 3bk2_A RNAse J, metal dependen 22.4 1.2E+02 0.0041 30.0 6.0 79 149-227 309-406 (562)
392 3rjz_A N-type ATP pyrophosphat 22.4 3.1E+02 0.011 23.6 7.9 94 149-250 8-119 (237)
393 3fwz_A Inner membrane protein 22.2 2.6E+02 0.0089 21.2 7.6 74 147-228 8-81 (140)
394 4e3z_A Putative oxidoreductase 22.1 3.7E+02 0.013 23.0 10.0 96 148-246 28-135 (272)
395 3cpr_A Dihydrodipicolinate syn 22.1 1.5E+02 0.0051 26.6 6.1 54 198-252 27-90 (304)
396 3l21_A DHDPS, dihydrodipicolin 22.1 1.3E+02 0.0044 27.1 5.7 54 198-252 26-89 (304)
397 3sr3_A Microcin immunity prote 22.1 3E+02 0.01 25.1 8.2 79 167-245 10-106 (336)
398 2x9g_A PTR1, pteridine reducta 21.9 3.9E+02 0.013 23.1 9.2 76 147-225 24-113 (288)
399 2q2v_A Beta-D-hydroxybutyrate 21.9 3.6E+02 0.012 22.8 9.4 97 147-246 5-109 (255)
400 3lou_A Formyltetrahydrofolate 21.9 1.5E+02 0.005 26.6 5.9 91 149-244 99-193 (292)
401 4es6_A Uroporphyrinogen-III sy 21.2 54 0.0018 28.5 2.9 59 170-228 6-68 (254)
402 3tl3_A Short-chain type dehydr 21.0 1E+02 0.0035 26.5 4.7 94 147-246 10-113 (257)
403 1yxm_A Pecra, peroxisomal tran 20.5 4.2E+02 0.014 23.0 11.0 97 147-246 19-130 (303)
404 2nuw_A 2-keto-3-deoxygluconate 20.4 4.4E+02 0.015 23.2 8.9 80 149-254 68-155 (288)
405 1yo6_A Putative carbonyl reduc 20.4 3.7E+02 0.013 22.3 8.6 96 148-246 5-112 (250)
406 3o1l_A Formyltetrahydrofolate 20.4 2E+02 0.0069 25.8 6.5 88 149-243 109-202 (302)
407 1edo_A Beta-keto acyl carrier 20.1 3.8E+02 0.013 22.2 9.8 96 148-246 3-109 (244)
No 1
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-49 Score=384.81 Aligned_cols=349 Identities=31% Similarity=0.470 Sum_probs=305.4
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES 146 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~ 146 (422)
++.++++.+|.++.....+..+++. .++|+|+.|++++++++++.+++.+ +....+||+++..++|+++++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~ 84 (363)
T 3ffh_A 7 KKSLAGLSSYKPGKREEEVMAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLEE 84 (363)
T ss_dssp CGGGTTCCC----CHHHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCCG
T ss_pred hHHHHhCCCCCCCCCHHHHHHhcCC--CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHhCCCh
Confidence 5567778888877777777777765 5789999999999999999999987 444467888888999999999999999
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+|++++++.++ +++++|++++
T Consensus 85 ~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~ 163 (363)
T 3ffh_A 85 EELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-EKTTIVWICN 163 (363)
T ss_dssp GGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-TTEEEEEEES
T ss_pred hhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-cCCCEEEEeC
Confidence 999999999999999999999999999999999999999999999999999987788999999999997 6899999999
Q ss_pred CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
|+||||.+++.+++.+|++. |+++|+||+|.+|.++. .........+++++++||||.+|++|+|+||+++++++
T Consensus 164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 243 (363)
T 3ffh_A 164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243 (363)
T ss_dssp SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH
Confidence 99999999999999999985 89999999999887521 23344456789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
++.+.....+++.+.+.+.++.++|++.++++ .+++++++++++.+.|+++..+.+.++.++|+|++++. +.+++.+
T Consensus 244 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~ 321 (363)
T 3ffh_A 244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGI--EAGTIFS 321 (363)
T ss_dssp HHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSS--CHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCC--CHHHHHH
Confidence 99999988899999999999999999888888 99999999999999999954466678889999999974 7899999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|.++||.++++..++.++++||+++++++++++.++|+++
T Consensus 322 ~l~~~gi~v~~g~~~~~~~~iRis~~~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 322 YLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHTTEECEETTTTTCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEeCccCCCCCeEEEECCCHHHHHHHHHHHHHh
Confidence 99999999999887767899999999888889999988764
No 2
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.5e-49 Score=384.31 Aligned_cols=347 Identities=29% Similarity=0.505 Sum_probs=309.8
Q ss_pred HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES 146 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~ 146 (422)
+++++++.+|.++.....++++++. +++|+|+.|++++++++.+++++.+ +....+|+++...++|+++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~ 82 (365)
T 3get_A 5 NEFLNNLSNYEPGKDIEVIAKEYGV--KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQN 82 (365)
T ss_dssp CGGGGGSCCCCCCCCHHHHHHHTTC--SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCG
T ss_pred chhHhhcCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHhCCCc
Confidence 4667788899888888888888876 6789999999999999999999987 444477877755899999999999989
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++. ++++ +|+++++++++ +++++|+++
T Consensus 83 ~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~ 160 (365)
T 3get_A 83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC 160 (365)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred ceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence 99999999999999999999999999999999999999999999999999997 6677 99999999997 789999999
Q ss_pred CCCCccCcCCCHHHHHHHHcC---CCeEEEccCCcccc---CCC---chhhhhhcCCcEEEEccChhhhccccccceeee
Q 014594 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFS---GLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (422)
Q Consensus 226 ~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~---~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~ 296 (422)
+|+||||.+++.+++.+|++. |+++|+||+|.++. .+. +........+++++++||||.+|++|+|+||++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 999999999999999999984 99999999999877 322 233444567899999999999999999999999
Q ss_pred cCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 375 (422)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~ 375 (422)
+++++++.+......++.+.+.+.++.++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++.. +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~-~~ 318 (365)
T 3get_A 241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKHN-IKIIDSYTNFITYFFDEK-NS 318 (365)
T ss_dssp ECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCSSSEEEEECSSS-CH
T ss_pred cCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECCCC-CH
Confidence 9999999999998899999999999999999888888 99999999999999999985 566788899999999855 88
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.+.|.++||.++++..++ ++++||+++++++++++.++|+++
T Consensus 319 ~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~~~~~i~~l~~~l~~~ 363 (365)
T 3get_A 319 TDLSEKLLKKGIIIRNLKSYG-LNAIRITIGTSYENEKFFTEFDKI 363 (365)
T ss_dssp HHHHHHHHTTTEECEECGGGT-CSEEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEEECccCC-CCEEEEEcCCHHHHHHHHHHHHHH
Confidence 999999999999999988765 899999999988899999988764
No 3
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.6e-49 Score=384.79 Aligned_cols=337 Identities=31% Similarity=0.538 Sum_probs=292.0
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~ 145 (422)
++++.+.++.+|.+.... ...++|+|+.|+|+++++|.+ .+....+||+++..++|++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~~~~~~~v-----a~~~~~~Y~~~~~~~lr~~la~~~~~~ 74 (356)
T 1fg7_A 9 LARENVRNLTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAQYAGVK 74 (356)
T ss_dssp HSCHHHHHCCCCCCCCCC---------TTTCSEECSSCCCSSCCCCCC-----CCCCTTSCCCSSCHHHHHHHHHHHTSC
T ss_pred HhhHHHHhcCCCCCCccc---------CCCceEEeeCCCCCCCCCHhH-----hhhhhccCCCccHHHHHHHHHHHhCCC
Confidence 356778888887654321 124689999999999988876 223346798888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
+++|++|+|++++++.++++++++| |+|+++.|+|+.+...++..|++++.++.++++.+|++++++.++ ++++|++
T Consensus 75 ~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~v~l 152 (356)
T 1fg7_A 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYV 152 (356)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEEEEEE
T ss_pred hHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc--CCCEEEE
Confidence 8999999999999999999999999 999999999999999999999999999987778899999999886 7899999
Q ss_pred eCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594 225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~ 301 (422)
++||||||.+++.+++.+|++. |+++|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++
T Consensus 153 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (356)
T 1fg7_A 153 CSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232 (356)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence 9999999999999999998875 8999999999988732233333345688999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHccCChH--HH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCCHHH
Q 014594 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIY--LE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~--~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
++.+.....+|+.|.++|.++.++|++.++ ++ .+++++++++++.+.|++++.+ .+.|+.++|+|++++ +..+
T Consensus 233 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---~~~~ 309 (356)
T 1fg7_A 233 INLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---ASSA 309 (356)
T ss_dssp HHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---THHH
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---CHHH
Confidence 999999888899999999999999987655 67 8889999999999999998743 456788999999996 6889
Q ss_pred HHHHHHhCCcEEEe-CCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 378 LKDDLAKMGVMIRH-YNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 378 ~~~~L~~~gI~v~~-~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+.|.++||.+++ +..++.++++||+++++++++++.++++.+
T Consensus 310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 310 VFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAE 354 (356)
T ss_dssp HHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCEEEEECCCCCCCCCeEEEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999 665666789999999988899999998875
No 4
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.4e-47 Score=370.36 Aligned_cols=325 Identities=26% Similarity=0.391 Sum_probs=291.5
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
.++++|+|+.|++++++++++++++.+ +.....||+++..++|+++++++++++++|++|+|+++++..++++++++||
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd 93 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEA 93 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTC
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCC
Confidence 457789999999999999999999987 4445778888889999999999999999999999999999999999999999
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC---C
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM---P 247 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~ 247 (422)
+|+++.|+|..+...++..|++++.++.++++.+|++++++.+++ +++++|++++|+||||.+++.+++.+|++. |
T Consensus 94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 173 (354)
T 3ly1_A 94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN 173 (354)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTT
T ss_pred eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCC
Confidence 999999999999999999999999999877889999999999975 689999999999999999999999999886 8
Q ss_pred CeEEEccCCccccCCC---chhhhhhcC-CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014594 248 ILVVLDEAYTEFSGLE---SRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323 (422)
Q Consensus 248 ~~li~Deay~~~~~~~---~~~~~~~~~-~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~ 323 (422)
+++|+||+|.++.+++ +........ +++++++||||.+|++|+|+||+++++++++.+......++.+.+.+.++.
T Consensus 174 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 253 (354)
T 3ly1_A 174 TMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAAL 253 (354)
T ss_dssp EEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHH
T ss_pred eEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 9999999999987654 334444455 889999999999999999999999999999999988888999999999999
Q ss_pred HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014594 324 AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR 402 (422)
Q Consensus 324 ~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR 402 (422)
++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++. +.+++.+.|.++||.++ +..++.++++|
T Consensus 254 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iR 329 (354)
T 3ly1_A 254 ASMNDSAFITYSKKSNDVSRQILLKALEDLK-LPYLPSEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCR 329 (354)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEE
Confidence 9999888888 89999999999999999875 45567889999999974 78999999999999998 65555689999
Q ss_pred EEecChhhHHHHHHHHhhh
Q 014594 403 VSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 403 is~~~~~~~~~l~~al~~l 421 (422)
|+++++++++++.++|+++
T Consensus 330 is~~~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 330 ISLGTPQEMQWVADTMREF 348 (354)
T ss_dssp EECCCHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHH
Confidence 9999888888888888754
No 5
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=2.4e-47 Score=369.79 Aligned_cols=340 Identities=29% Similarity=0.479 Sum_probs=296.4
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHH
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAK 140 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~ 140 (422)
++++.++.+.+|.+... ...+.++|+|+.|++++++++++.+++.+ +.. ..+||+++..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~--------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~ 76 (360)
T 3hdo_A 5 PLRQNIASMKGYIPGYQ--------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGE 76 (360)
T ss_dssp CCCHHHHHCCCCCCCCC--------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHH
T ss_pred hhHHHHHhcCCcCCCCC--------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHH
Confidence 35778888888865432 12346799999999999999999999986 333 367887778999999999
Q ss_pred HcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220 (422)
Q Consensus 141 ~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (422)
++|+++++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+ +++++. .+++
T Consensus 77 ~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~---~~~~ 151 (360)
T 3hdo_A 77 LYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER---YEGK 151 (360)
T ss_dssp HHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS---BCSS
T ss_pred HhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh---cCCC
Confidence 99999999999999999999999999999999999999999999999999999999998666555 444333 3568
Q ss_pred EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
++++++|+||||.+++.+++.+|++. |+++|+||+|.+|... .........+++++++||||.+|++|+|+||+++++
T Consensus 152 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 230 (360)
T 3hdo_A 152 VFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP 230 (360)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence 99999999999999999999999987 9999999999988543 344445567899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~ 378 (422)
++++.+......++.+++.+.++.++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++ +.+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~-~~~~~~l 308 (360)
T 3hdo_A 231 EVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIG-YDVIPSQGNYLFATPP-DRDGKRV 308 (360)
T ss_dssp HHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCSSSEEEEECT-TCCHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEcCCCccEEEEECC-CCCHHHH
Confidence 9999999998889999999999999999888888 99999999999999999884 5667888999999987 5688999
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.|.++||.++++..+..++++||++++++++++|.++++.+
T Consensus 309 ~~~l~~~gi~v~~~~~~~~~~~iRis~~~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 309 YDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLAALKEI 351 (360)
T ss_dssp HHHHHHTTEECBCCCSTTTTTSEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEECCCCCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 9999999999999876666799999999999999999999875
No 6
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-46 Score=365.93 Aligned_cols=340 Identities=34% Similarity=0.537 Sum_probs=298.9
Q ss_pred hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHH
Q 014594 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKD 141 (422)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~ 141 (422)
.++++.+..+.+|.+. .++++|+|+.|++++++++++.+++.+ +. ...+|++++..++|++++++
T Consensus 12 ~~~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~ 79 (367)
T 3euc_A 12 RIIRDDVRAMGAYHVP------------DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV 79 (367)
T ss_dssp HHSCHHHHHSCCSSCC------------CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCC------------CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH
Confidence 4567778888887542 246789999999999999999999876 32 34678888889999999999
Q ss_pred cCC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594 142 SGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220 (422)
Q Consensus 142 ~~~-~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (422)
+|+ ++++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+|++++++++++.+++
T Consensus 80 ~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 159 (367)
T 3euc_A 80 MQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA 159 (367)
T ss_dssp HTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred hCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence 998 7889999999999999999999999999999999999998889999999999998888899999999999844899
Q ss_pred EEEEeCCCCccCcCCCHHHHHHHHc----C--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccccee
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKILE----M--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i~~----~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
+|++++||||||.+++.+++++|++ . |+++|+||+|.+|.+. .....+...++++++.||||. +++|+|+||
T Consensus 160 ~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~ 237 (367)
T 3euc_A 160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGY 237 (367)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-CSGGGGGTCTTEEEEEECCCT-TSCSCCEEE
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-chHHHHhhCCCEEEEecchhh-cccccCcee
Confidence 9999999999999999998888864 2 5999999999998743 334455567889999999998 899999999
Q ss_pred eecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC
Q 014594 295 GAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM 373 (422)
Q Consensus 295 i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~ 373 (422)
+++++++++.+.....+++.+.+.+.++.++|++.++++ .+++++++++++.+.|++++.+.+.++.++|+|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 238 VAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP--- 314 (367)
T ss_dssp EEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS---
T ss_pred eeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---
Confidence 999999999999888889999999999999999877777 8999999999999999998666778889999999996
Q ss_pred CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 374 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 374 ~~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+++.+.|.++||.++++.. ...++++||+++++++++++.++|+++
T Consensus 315 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 315 DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAAS 364 (367)
T ss_dssp CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecCCHHHHHHHHHHHHHH
Confidence 788999999999999998775 234689999999988899999988764
No 7
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.3e-46 Score=359.16 Aligned_cols=317 Identities=26% Similarity=0.361 Sum_probs=278.6
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
.++++|+|+.|+|+++++|.+.+++.+ .....+||+++..++|+++++++++++++|++|+|+++++.++++.+ +||
T Consensus 14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd 91 (337)
T 3p1t_A 14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM 91 (337)
T ss_dssp CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTS
T ss_pred CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCC
Confidence 346789999999999999999999987 34457788888999999999999999899999999999999999977 899
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l 250 (422)
+|+++.|+|..+...++..|++++.++.++++++|++++++. .+++++++++||||||.+++.+++.+|++. +. +
T Consensus 92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ 167 (337)
T 3p1t_A 92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 167 (337)
T ss_dssp EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-E
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-E
Confidence 999999999999999999999999999888889999999876 468999999999999999999999999987 65 6
Q ss_pred EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh
Q 014594 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330 (422)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~ 330 (422)
|+||+|.+|...... .....+++++++||||.+|++|+|+||+++++++++.+.+....++.+.+.+.++.++|++.+
T Consensus 168 ivDea~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~ 245 (337)
T 3p1t_A 168 LIDETYVDYSSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR 245 (337)
T ss_dssp EEECTTGGGSSCSSS--CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH
T ss_pred EEECCChhhcccccc--ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH
Confidence 779999988754322 122357889999999999999999999999999999998888889999999999999999866
Q ss_pred HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014594 331 YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 409 (422)
Q Consensus 331 ~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~ 409 (422)
+.+ .++++.++++++.+.|++++ +.+.++.++|+|+..+ +.+++.+.|.++||.++++..++.++++||++++++
T Consensus 246 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~ 321 (337)
T 3p1t_A 246 AREAHIAKTLAQRRRVADALRGLG-YRVASSEANFVLVENA---AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREE 321 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSSEEEEECT---TTHHHHHHHHHTTEECEEGGGGTCCSEEEEECCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCc-CEECCCCCeEEEEEcC---CHHHHHHHHHHCCeEEEECccCCCCCeEEEecCCHH
Confidence 555 77778888999999999985 4566778889999886 346788888899999999887777899999999988
Q ss_pred hHHHHHHHHhhh
Q 014594 410 HTDALMECLMHL 421 (422)
Q Consensus 410 ~~~~l~~al~~l 421 (422)
++++|.++++++
T Consensus 322 ~~~~l~~al~~~ 333 (337)
T 3p1t_A 322 DNDRLLAALAEY 333 (337)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 8
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.5e-46 Score=367.69 Aligned_cols=326 Identities=24% Similarity=0.366 Sum_probs=273.2
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.++|+|+.|++++++++.+.+++.+ +. ....|+.. |..++|+++++++ | +++++|++|+|+++++++++
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 29 QGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF 108 (385)
T ss_dssp TTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence 346789999999999989999888765 22 22568654 7899999999997 3 46789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++++||+|+++.|+|..+...++..|++++.++.+ +++.+|+++++++++ .++++|+++|||||||.+++.++++
T Consensus 109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~l~ 187 (385)
T 1b5p_A 109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNPTGAVYPKEVLE 187 (385)
T ss_dssp HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-CCCEEEEEeCCCCCCCCCcCHHHHH
Confidence 9999999999999999999999999999999999975 467899999999997 6799999999999999999988888
Q ss_pred HHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~ 313 (422)
+|++. |+++|+||+|.++.+++. ....+.. +++++++||||.||++|+|+||+++++++++.+...... ++
T Consensus 188 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~ 266 (385)
T 1b5p_A 188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS 266 (385)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence 77654 999999999999876431 2222223 789999999999999999999999999999988776543 57
Q ss_pred CcHHHHHHHHHHccC----ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014594 314 VSVAAEVAACAALQN----PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGV 387 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~----~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI 387 (422)
++.+.|.++.++|++ .++++ .+++++++++++.+.|+++++....|.+++|+|++++ .+.+..++.+.|.++||
T Consensus 267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv 346 (385)
T 1b5p_A 267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGV 346 (385)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCe
Confidence 889999999999965 46677 8899999999999999887533345667789999986 25688999999999999
Q ss_pred EEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 388 MIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 388 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
.+++|..++.++++|||++..+ +++.+++++|+
T Consensus 347 ~v~~g~~f~~~~~iRis~~~~~--~~i~~~l~~l~ 379 (385)
T 1b5p_A 347 AVVPGTDFAAFGHVRLSYATSE--ENLRKALERFA 379 (385)
T ss_dssp ECEESGGGTCTTEEEEECCSCH--HHHHHHHHHGG
T ss_pred EEecccccCCCCeEEEEecCCH--HHHHHHHHHHH
Confidence 9999877555789999999543 56888888763
No 9
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=7.2e-46 Score=359.97 Aligned_cols=342 Identities=26% Similarity=0.401 Sum_probs=288.6
Q ss_pred cCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+|.++..+..++.+++.+++++|+|+.|++++++++++.+++.+. .....|++.+..++|+++++++++++++|++|
T Consensus 3 ~~~~~~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~v~~~ 82 (364)
T 1lc5_A 3 LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAG 82 (364)
T ss_dssp CCCCSSSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred CcccCCCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHCcCHHHEEEC
Confidence 34455555666667778877778999999999999999999998873 33467877788999999999999988999999
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
+|++++++.+++.+ +||+|+++.|+|+.+...++..|++++.++.+. ++.+ ++++.+.+. ++++++++++|+||
T Consensus 83 ~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~-~~~~~v~i~~p~np 158 (364)
T 1lc5_A 83 NGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT-PDLDCLFLCTPNNP 158 (364)
T ss_dssp SSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC-TTCCEEEEESSCTT
T ss_pred CCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc-CCCCEEEEeCCCCC
Confidence 99999999999987 779999999999999999999999999999653 3333 466666665 67899999999999
Q ss_pred cCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCC-chhhhhhcCCcEEEEccChhhhccccccceeee-cCHHHHHH
Q 014594 231 DGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEY 304 (422)
Q Consensus 231 tG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~~~~~~ 304 (422)
||.+++.+++++|++ . |+++|+||+|.+|.+++ +.....+..++++++.|+||.+|++|+|+||++ +++++++.
T Consensus 159 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 238 (364)
T 1lc5_A 159 TGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR 238 (364)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHH
Confidence 999999766666655 3 99999999999887643 233334456789999999999999999999999 99999999
Q ss_pred HHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH
Q 014594 305 LWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 305 l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
+.....+++.|++.+.++.++|++.++++ .+++++++++++.+.|++++.+.+.++.++|+|+++++ +..++.+.|.
T Consensus 239 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~l~ 316 (364)
T 1lc5_A 239 MRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDIDLQRRLL 316 (364)
T ss_dssp HHHHSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC--TTCCHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCC--cHHHHHHHHH
Confidence 99888889999999999999999877888 88999999999999999886566677889999999974 3457889999
Q ss_pred hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++||.++++..+. .++++||+++..++++++.++++++
T Consensus 317 ~~gi~v~~g~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 317 TQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV 356 (364)
T ss_dssp TTTEECEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred HCCcEEeeCcccCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 9999999987642 3689999999988888999998875
No 10
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2e-45 Score=356.04 Aligned_cols=322 Identities=27% Similarity=0.499 Sum_probs=284.2
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
+++++|||+.|++++++++++.+++.+ +.....||+++..++|+++++++++++++|++|+|++++++.+++.+ |
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d 99 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----E 99 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----S
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----C
Confidence 457799999999999999999988876 33346788888899999999999999999999999999999999977 8
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~ 247 (422)
+|+++.|+|..+...++..|++++.++.+.+.++|++++++.++ + ++++++++|+||||.+++.+++.+|++. |
T Consensus 100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 177 (361)
T 3ftb_A 100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 177 (361)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999987766889999999997 4 9999999999999999999998888873 9
Q ss_pred CeEEEccCCccccCC--CchhhhhhcCCcEEEEccChhhhccccccceeee-cCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014594 248 ILVVLDEAYTEFSGL--ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPYNVSVAAEVAACA 324 (422)
Q Consensus 248 ~~li~Deay~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~~~~~~l~~~~~~~~~~~~~~~aa~~ 324 (422)
+++|+||+|.++..+ .+........+++++++|+||.+|++|+|+||++ .++++++.+.....+++.+++.+.++.+
T Consensus 178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (361)
T 3ftb_A 178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257 (361)
T ss_dssp CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999999999998864 2333444567889999999999999999999999 8999999999888889999999999999
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCe
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGY 400 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--~~~~~ 400 (422)
+|++.++++ .+++++++++++.+.|++++.+. +.++.++|+|+++++ .+.+++.+.|.++||.++++..+ ..+++
T Consensus 258 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~ 336 (361)
T 3ftb_A 258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSF 336 (361)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCE
Confidence 999888888 89999999999999999987776 778889999999984 68899999999889999998764 33689
Q ss_pred EEEEecChhhHHHHHHHHhhh
Q 014594 401 VRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 401 iRis~~~~~~~~~l~~al~~l 421 (422)
+||++++.++++++.++++++
T Consensus 337 iRis~~~~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 337 VRFAIKDEKKNTKFLRALKGV 357 (361)
T ss_dssp EEEECCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHH
Confidence 999999988889999999875
No 11
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4e-45 Score=352.71 Aligned_cols=315 Identities=24% Similarity=0.390 Sum_probs=273.6
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~ 172 (422)
++++|||+.|++++++++++.+++.+ +.....||++...++|+++++++++++++|++|+|+++++.+++++++ ||+
T Consensus 14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~ 91 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSR 91 (350)
T ss_dssp --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCE
T ss_pred cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCE
Confidence 46789999999999999999999987 333367877755899999999999999999999999999999999887 999
Q ss_pred EEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCe
Q 014594 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PIL 249 (422)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~ 249 (422)
|+++.|+|..+...++..|++++.++. ++..++++ +++++|++++|+||||.+++.+++.+|++. ..+
T Consensus 92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 162 (350)
T 3fkd_A 92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF---------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT 162 (350)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC---------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc---------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence 999999999999999999999999997 54334443 578999999999999999999999999986 479
Q ss_pred EEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccC
Q 014594 250 VVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (422)
Q Consensus 250 li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~ 328 (422)
+|+||+|.+|...+. .....+..+++++++||||.+|++|+|+||+++++++++.+.....+++++.+.+.++.++|++
T Consensus 163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIH 242 (350)
T ss_dssp EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHC
T ss_pred EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence 999999999876443 2344456788999999999999999999999999999999999888899999999999999988
Q ss_pred Ch-HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCC--CCCeEEE
Q 014594 329 PI-YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKE--LKGYVRV 403 (422)
Q Consensus 329 ~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~--~~~~iRi 403 (422)
.+ |.+ .++.. ++++++.+.|++++.+.+.++.++|+|++++.. +.+++.+.|.+ +||.++++..+. .++++||
T Consensus 243 ~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRi 320 (350)
T 3fkd_A 243 PAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRI 320 (350)
T ss_dssp TTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEE
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEE
Confidence 65 666 55444 889999999998866777888999999999865 88999999997 999999987643 3789999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014594 404 SVGKPEHTDALMECLMHL 421 (422)
Q Consensus 404 s~~~~~~~~~l~~al~~l 421 (422)
++++++++++|.++++++
T Consensus 321 s~~~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 321 TTQRPAQNQLFIKALETF 338 (350)
T ss_dssp ECCCHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHH
Confidence 999988889999999876
No 12
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=6.5e-45 Score=353.95 Aligned_cols=318 Identities=28% Similarity=0.479 Sum_probs=278.2
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHH------cCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 98 VKIDANENPYGPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~----~~~~y~~~~~~~lr~~la~~------~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
|||+.|++++++++++.+++.+ +. ....|+.....++|++++++ +++++++|++|+|++++++.+++++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l 112 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF 112 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh
Confidence 9999999999999999988875 22 13678766447999999999 5677889999999999999999999
Q ss_pred cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
+++||+|+++.|+|+.+...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.+|++.
T Consensus 113 ~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~ 192 (369)
T 3cq5_A 113 GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192 (369)
T ss_dssp CSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred cCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999877789999999999974379999999999999999999999999997
Q ss_pred -CCeEEEccCCccccCCCchhhhhhcCC-cEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014594 247 -PILVVLDEAYTEFSGLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACA 324 (422)
Q Consensus 247 -~~~li~Deay~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~ 324 (422)
++++|+||+|.++..+.+.....+..+ +++++.||||.+|++|+|+||+++++++++.+.....+|+.+++.+.++.+
T Consensus 193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 272 (369)
T 3cq5_A 193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIV 272 (369)
T ss_dssp CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 899999999999875433344334456 899999999999999999999999999999998888889999999999999
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV 403 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRi 403 (422)
+|++.++++ .+++++++++++.+.|++.+ +.+.++.++|+|++++ .+..++.+.|.++||.++++. .++++||
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~---~~~~iRi 346 (369)
T 3cq5_A 273 ALRHSADTLGTVEKLSVERVRVAARLEELG-YAVVPSESNFVFFGDF--SDQHAAWQAFLDRGVLIRDVG---IAGHLRT 346 (369)
T ss_dssp HHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECCSSSEEEEECC--SSHHHHHHHHHHTTEECBCCS---CTTEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECC--CCHHHHHHHHHHCCEEEEECC---CCCeEEE
Confidence 999877888 89999999999999998865 4555788899999986 578899999999999999872 3689999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014594 404 SVGKPEHTDALMECLMHL 421 (422)
Q Consensus 404 s~~~~~~~~~l~~al~~l 421 (422)
+++++++++++.++++++
T Consensus 347 s~~~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 347 TIGVPEENDAFLDAAAEI 364 (369)
T ss_dssp ECCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHH
Confidence 999888888888888753
No 13
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=3.9e-45 Score=350.88 Aligned_cols=308 Identities=30% Similarity=0.469 Sum_probs=269.0
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCCcchHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVLD 168 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~y~~~~~~~lr~~la~~~~---~~~~~i~~~~G~~~al~~~~~~l~~ 168 (422)
.++++|+.|++++++++++.+++.+.. ..++|++.+..++|++++++++ +++++|++|+|++++++.+++++
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-- 96 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-- 96 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence 468999999999999999999998732 2356877778999999999999 88899999999999999999987
Q ss_pred CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (422)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~ 247 (422)
||+|+++ |+|+.+...++..|++++.++.++++.+|++++ +++++|++++||||||.+++.+++.+|++. |
T Consensus 97 -gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 168 (335)
T 1uu1_A 97 -DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------GEGDVVFIPNPNNPTGHVFEREEIERILKTGA 168 (335)
T ss_dssp -SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC
T ss_pred -CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 8999999 999999999999999999999877778888776 478999999999999999999999999998 9
Q ss_pred CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~ 327 (422)
++|+||+|.+|.+. +.....+..+++++++||||.+|++|+|+||+++++++++.+.....+++.|.+.+.++.++|+
T Consensus 169 -~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 246 (335)
T 1uu1_A 169 -FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALD 246 (335)
T ss_dssp -EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHH
T ss_pred -EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhC
Confidence 99999999987653 3333345567899999999999999999999999999999998888889999999999999999
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
+.++.+ .+++++++++++.+.|++++ +.+.|++++|+|++++. .+..++.+.|.++||.++++ ++++||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~-----~~~iRis~~ 319 (335)
T 1uu1_A 247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSF-----REGVRITIG 319 (335)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECCT-HHHHHHHHHHHHHTEEEEEE-----TTEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-cEEcCCCCeEEEEECCC-CCHHHHHHHHHHCCEEEEEC-----CCeEEEEeC
Confidence 876777 88899999999999998875 45567889999999974 46778999999999999983 579999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014594 407 KPEHTDALMECLMHL 421 (422)
Q Consensus 407 ~~~~~~~l~~al~~l 421 (422)
..++++++.++|+.+
T Consensus 320 ~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 320 KREENDMILRELEVF 334 (335)
T ss_dssp CHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhh
Confidence 887777777777653
No 14
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.2e-44 Score=355.18 Aligned_cols=325 Identities=22% Similarity=0.300 Sum_probs=272.8
Q ss_pred CCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHH
Q 014594 92 RKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (422)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~ 161 (422)
.+++++|+|+.|++++++++.+.+++.+ +.....|++. +..++|+++++++ | ++++ +|++|+|++++++.
T Consensus 27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~ 106 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS 106 (396)
T ss_dssp CTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence 3467899999999999999999999987 3334678665 6899999999886 6 4588 99999999999999
Q ss_pred HHHHhcCCC-----CEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++++++++| |+|+++.|+|..+...++..|++++.++. ++++.+|++++++++. +++++|++++||||||.++
T Consensus 107 ~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~nptG~~~ 185 (396)
T 3jtx_A 107 FVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-KRTKLVFVCSPNNPSGSVL 185 (396)
T ss_dssp HHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HTEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc-cCcEEEEEECCCCCCCCcC
Confidence 999999997 79999999999999999999999999996 3466789999999997 4899999999999999999
Q ss_pred CHHHHHHHHcC----CCeEEEccCCccccCCC-chhhhh-------hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWV-------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~-------~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
+.+++++|++. |+++|+||+|.++.+++ ...... ...++++++.||||.|+++|+|+||+++++++++
T Consensus 186 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (396)
T 3jtx_A 186 DLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK 265 (396)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHH
Confidence 99997777653 99999999999987654 222211 1368899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~ 380 (422)
.+..... .++.+.+.+.++.++|++.++++ .+++++++++.+.+.|+++. ....+.+++|+|++++. .+..++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 343 (396)
T 3jtx_A 266 NFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF-DVKLPDASFYIWLKVPD-GDDLAFAR 343 (396)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCCSSSSEEEEECTT-SCHHHHHH
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCeeEEEEEECCC-CCHHHHHH
Confidence 8876654 47889999999999999888888 99999999999999998862 23356788999999974 57889999
Q ss_pred HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|. ++||.+.++..+. ..+++||+++.+ .+++.+++++|
T Consensus 344 ~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l 391 (396)
T 3jtx_A 344 NLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVAD--VATCVKAAEDI 391 (396)
T ss_dssp HHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence 886 6799999876532 368999999873 35677777665
No 15
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2.1e-44 Score=352.98 Aligned_cols=333 Identities=20% Similarity=0.273 Sum_probs=273.1
Q ss_pred hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHcC------CCCCCEEEeC
Q 014594 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGC 153 (422)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~ 153 (422)
+...+.++...++++|+|+.|+++++++|++.+++.+ +. ....|+.. +..++|++++++++ +++++|++|+
T Consensus 19 ~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~ 98 (391)
T 3h14_A 19 VMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP 98 (391)
T ss_dssp HHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred HHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence 3334555555677899999999999999999999876 33 23567654 68999999999974 6789999999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
|++++++.++++++++||+|+++.|+|..+...++..|++++.++.+. ++.+|++++++. ++++|++++|+|||
T Consensus 99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~npt 174 (391)
T 3h14_A 99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----DLAGLMVASPANPT 174 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTT
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc----CCeEEEECCCCCCC
Confidence 999999999999999999999999999999999999999999999653 467899999876 78999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~ 307 (422)
|.+++.+++++|++. |+++|+||+|.+|.+++.........+++++++|+||.+|++|+|+||+++++++++.+..
T Consensus 175 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~ 254 (391)
T 3h14_A 175 GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVER 254 (391)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHH
Confidence 999998877777653 9999999999998865533333334678899999999999999999999999999998876
Q ss_pred hcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594 308 AKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDL 382 (422)
Q Consensus 308 ~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L 382 (422)
... .++.+.+.+.++.++|+..++++ .+++++++++.+.+.|+++++.. ..+.+++|+|++++. +.+..++.+.|
T Consensus 255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (391)
T 3h14_A 255 IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334 (391)
T ss_dssp HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHH
T ss_pred HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHH
Confidence 654 46789999999999998767777 89999999999999999887655 356677899999986 56889999998
Q ss_pred Hh-CCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 383 AK-MGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 383 ~~-~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++ +||.++++..+. .++++||+++.++ +++.+++++|
T Consensus 335 ~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 375 (391)
T 3h14_A 335 LEKAGVAVTPGLDFDPERGAGTLRFSYARAT--ADIEEGLDRL 375 (391)
T ss_dssp HHHHCEECEEGGGTCTTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHCCEEEcCchhhCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 75 599999987643 3689999999743 5677766654
No 16
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=6.6e-44 Score=347.59 Aligned_cols=324 Identities=19% Similarity=0.260 Sum_probs=271.9
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHc----CCC--CC-CEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----GLE--SD-HILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~~-~~~~lr~~la~~~----~~~--~~-~i~~~~G~~~al~~ 161 (422)
++.++|+|+.|+++++++|.+.+++.+ +.. .+.|++. +..++|+++++++ |++ ++ +|++|+|+++++..
T Consensus 23 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~ 102 (376)
T 2dou_A 23 RGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAH 102 (376)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHH
T ss_pred cCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence 456789999999999999999999876 322 3678774 7889999999998 764 45 99999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++++++||+|+++.|+|+.+...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++++
T Consensus 103 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~ 181 (376)
T 2dou_A 103 LLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVADWGYFE 181 (376)
T ss_dssp HHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHHH
T ss_pred HHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCCHHHHH
Confidence 999999999999999999999999999999999999986667789999999886 5789999999999999999988877
Q ss_pred HHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY 312 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~ 312 (422)
+|++. |+++|+||+|.++.+++. .....+..+++++++||||.+|++|+|+||+++++++++.+..... .+
T Consensus 182 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 261 (376)
T 2dou_A 182 EALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDF 261 (376)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhccc
Confidence 77653 999999999999875432 2222233578899999999999999999999999999998876554 35
Q ss_pred CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594 313 NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI 389 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v 389 (422)
+.+.+.+.++.++|++ .++++ .+++++++++++.+.|+++ +.+ .+..++|+|++++++.+..++.+.|.++||.+
T Consensus 262 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v 339 (376)
T 2dou_A 262 NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVAL 339 (376)
T ss_dssp CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEEC
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEEE
Confidence 6889999999999988 56777 8889999999999999987 443 35567889999987778889999999889999
Q ss_pred EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++..++ .++++||+++.+ .+++.+++++|
T Consensus 340 ~~g~~f~~~~~~~~Ris~~~~--~~~i~~~l~~l 371 (376)
T 2dou_A 340 APGRGFGPGGKGFVRIALVRP--LEELLEAAKRI 371 (376)
T ss_dssp EEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred cCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9886543 368999999863 25677776654
No 17
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.5e-44 Score=346.59 Aligned_cols=317 Identities=21% Similarity=0.253 Sum_probs=267.1
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~~ 164 (422)
.+ ++|+|+.|++++++++.+.+++.+. .....|++. +..++|+++++++ |+ ++++|++|+|+++++..+++
T Consensus 22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~ 100 (376)
T 3ezs_A 22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS 100 (376)
T ss_dssp SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHH
T ss_pred cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHH
Confidence 44 8999999999999999999999874 333678664 6899999999987 76 78999999999999999999
Q ss_pred HhcCC--CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 165 CVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++++ ||+|+++.|+|..+...++..|++++.++.+++.++++ ++++.+. +++++|++++||||||.+++.+++++
T Consensus 101 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~v~~~~p~nptG~~~~~~~l~~ 178 (376)
T 3ezs_A 101 FVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIS 178 (376)
T ss_dssp HHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-HHCSEEEECSSCTTTCCCCCHHHHHH
T ss_pred HHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-cCCCEEEEcCCCCCcCCCCCHHHHHH
Confidence 99999 99999999999999999999999999999765445555 6666665 47899999999999999999999988
Q ss_pred HHcC----CCeEEEccCCccccCCCchh---hhhh-----cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594 243 ILEM----PILVVLDEAYTEFSGLESRM---EWVK-----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~~---~~~~-----~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~ 310 (422)
|++. |+++|+||+|.+|.+++... .... ..+++++++||||.+|++|+|+||+++++++++.+.....
T Consensus 179 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 258 (376)
T 3ezs_A 179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA 258 (376)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHh
Confidence 8653 99999999999988654322 2222 5788999999999999999999999999999999987765
Q ss_pred --CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014594 311 --PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG 386 (422)
Q Consensus 311 --~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~g 386 (422)
.++.+++.+.++.++|++.++++ .+++++++++.+.+.|+ ++ . .|..++|+|++++ +..++.+.|.+ +|
T Consensus 259 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~~-~-~~~~~~~~~~~~~---~~~~~~~~l~~~~g 331 (376)
T 3ezs_A 259 YLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--NT-L-IYPYSFYVYLPVQ---NGENFAKTLYQNEG 331 (376)
T ss_dssp TTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--TC-C-CCSBSSEEEEECS---CHHHHHHHHHHHHC
T ss_pred hhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--CC-C-CCCcceEEEEECC---CHHHHHHHHHHhCC
Confidence 47889999999999999988888 99999999999999998 43 3 6788999999997 78899999986 89
Q ss_pred cEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.++++..+. .++++||+++.+ .+++++++++|
T Consensus 332 i~v~~g~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l 368 (376)
T 3ezs_A 332 IITLPALYLGRNRIGADYVRLALVYD--TPLLEKPLEII 368 (376)
T ss_dssp CBCEEGGGGCSTTTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred EEEeCcHHhCCCCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence 9999876633 568999999752 24455555543
No 18
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.7e-43 Score=347.59 Aligned_cols=332 Identities=22% Similarity=0.304 Sum_probs=268.7
Q ss_pred HHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCC-CcchHHHHHHHHHHc----CC--CC-CCEEEeCCH
Q 014594 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYP-DPESRRLRAALAKDS----GL--ES-DHILVGCGA 155 (422)
Q Consensus 87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~y~-~~~~~~lr~~la~~~----~~--~~-~~i~~~~G~ 155 (422)
+.+++.++.++|+|+.|++++++++.+.+++.+. .. .+.|+ ..+..++|+++++++ |+ ++ ++|++|+|+
T Consensus 29 ~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~ 108 (412)
T 2x5d_A 29 KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGS 108 (412)
T ss_dssp HHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCH
T ss_pred HHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCCh
Confidence 3344445678999999999999999999999873 22 24684 567899999999998 74 66 699999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
++++..++++++++||+|+++.|+|+.+...++..|++++.++.++ ++.+|+++++++++ +++++|++++||||||.
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~ 187 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQ 187 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCC
Confidence 9999999999999999999999999999999999999999999654 34478999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHH
Q 014594 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (422)
Q Consensus 234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l 305 (422)
+++.+++++|++. |+++|+||+|.++.+.+. ....+. ..+++++++|+||.+|++|+|+||+++++++++.+
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 267 (412)
T 2x5d_A 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL 267 (412)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHH
Confidence 9998887777654 999999999999875321 222222 25789999999999999999999999999999988
Q ss_pred HHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC---CHHHH
Q 014594 306 WRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKL 378 (422)
Q Consensus 306 ~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~---~~~~~ 378 (422)
..... .++.+++.+.++.++|++ .+|++ .+++++++++++.+.|++++.....+.+++|+|++++.+. +..++
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 347 (412)
T 2x5d_A 268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEF 347 (412)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHH
T ss_pred HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHH
Confidence 76544 478899999999999986 56777 8899999999999999887533334455778999997655 78899
Q ss_pred HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.|. ++||.++++..+. .++++||+++.+ .+++.+++++|
T Consensus 348 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 391 (412)
T 2x5d_A 348 AKKLLQDAKVSVSPGIGFGDYGDDHVRFALIEN--RDRLRQAVRGI 391 (412)
T ss_dssp HHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 99987 5799999886532 368999999873 35677777665
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-43 Score=348.28 Aligned_cols=326 Identities=20% Similarity=0.264 Sum_probs=268.7
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCC-cchHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~-~~~~~lr~~la~~~----~~~--~-~~i~~~~G~~~al~~ 161 (422)
++.++|+|+.|++++++++.+.+++.+ +.. ...|++ .+..++|+++++++ |++ + ++|++|+|+++++..
T Consensus 45 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~ 124 (404)
T 2o1b_A 45 GPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVA 124 (404)
T ss_dssp CSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHH
T ss_pred CCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHH
Confidence 456789999999999989999999877 322 246866 47899999999998 864 4 799999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
++++++++||+|+++.|+|..+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++.+++
T Consensus 125 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l 203 (404)
T 2o1b_A 125 VPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATKEVF 203 (404)
T ss_dssp HHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc-cCceEEEEcCCCCCCCccCCHHHH
Confidence 9999999999999999999999999999999999999654 56789999999886 578999999999999999998777
Q ss_pred HHHHc---C-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594 241 LKILE---M-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (422)
Q Consensus 241 ~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~ 311 (422)
++|++ . |+++|+||+|.++.+++.. .... ...+++++++||||.+|++|+|+||+++++++++.+..... .
T Consensus 204 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~ 283 (404)
T 2o1b_A 204 DEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTN 283 (404)
T ss_dssp HHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhcc
Confidence 66654 4 9999999999998754321 1111 12367899999999999999999999999999998876544 4
Q ss_pred CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014594 312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM 388 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~ 388 (422)
++.+.+.+.++.++|++ .++++ .+++++++++++.+.|++++.....+.+++|+|++++.+.+..++.+.|. ++||.
T Consensus 284 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~ 363 (404)
T 2o1b_A 284 AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL 363 (404)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence 68899999999999987 56777 88899999999999999885333345567789999987678889999987 68999
Q ss_pred EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++++..+. .++++||+++.++ +++.+++++|
T Consensus 364 v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~~l 396 (404)
T 2o1b_A 364 VAPGKPFGENGNRYVRISLALDD--QKLDEAAIRL 396 (404)
T ss_dssp CEESGGGCGGGTTEEEEECCSCT--THHHHHHHHH
T ss_pred EeCchhhCcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 99987543 3689999998643 4566666654
No 20
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1e-42 Score=341.00 Aligned_cols=322 Identities=23% Similarity=0.336 Sum_probs=268.3
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~ 163 (422)
.++++|+|+.|++++++++.+.+++.+ +. ....|+.. +..++|+++++++ |+ ++++|++|+|+++++..++
T Consensus 39 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~ 118 (389)
T 1o4s_A 39 KGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAF 118 (389)
T ss_dssp TTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHH
T ss_pred cCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHH
Confidence 356789999999998888999998876 32 23568654 7899999999997 65 6789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ .++++|++++|+||||.+++.++++
T Consensus 119 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~ 197 (389)
T 1o4s_A 119 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GKTKAVLINSPNNPTGVVYRREFLE 197 (389)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cCceEEEEcCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999753 57899999999997 5899999999999999999977776
Q ss_pred HHHcC----CCeEEEccCCccccCCCc--hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594 242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY 312 (422)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~ 312 (422)
+|++. |+++|+||+|.++.+++. ....+.. .+++++++||||.+|++|+|+||+++++++++.+..... .+
T Consensus 198 ~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~ 277 (389)
T 1o4s_A 198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTS 277 (389)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhccc
Confidence 66553 999999999999876432 2222322 578999999999999999999999999999988876554 47
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEE
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIR 390 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~ 390 (422)
+.+.+.+.++.++|++. .+ .+++++++++++.+.|+++++....+.+++|+|++++ .+..++.+.|. ++||.++
T Consensus 278 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~ 353 (389)
T 1o4s_A 278 CINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR--GDDVKFCERLLEEKKVALV 353 (389)
T ss_dssp SCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS--SCHHHHHHHHHHHHCEECE
T ss_pred CCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC--CCHHHHHHHHHHHCCEEEe
Confidence 78899999999999876 45 8889999999999999987533334566788999986 57889999997 8999999
Q ss_pred eCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 391 HYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 391 ~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
++..+..++++||+++.. .+++.+++++|
T Consensus 354 ~g~~f~~~~~~Ris~~~~--~~~l~~~l~~l 382 (389)
T 1o4s_A 354 PGSAFLKPGFVRLSFATS--IERLTEALDRI 382 (389)
T ss_dssp EGGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred CchhcCCCCeEEEEEeCC--HHHHHHHHHHH
Confidence 987655567999999863 35677777665
No 21
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=7.2e-43 Score=341.57 Aligned_cols=348 Identities=21% Similarity=0.316 Sum_probs=278.2
Q ss_pred HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----
Q 014594 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS---- 142 (422)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~---- 142 (422)
.+..+.++ +...+.....+....+.++++|+.|++++++++.+.+++.+ +. ....|+.. +..++|+++++++
T Consensus 6 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~ 84 (388)
T 1j32_A 6 RVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDN 84 (388)
T ss_dssp HHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HhHhCCcc-HHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 34444444 23334444444444567789999999999889999988876 32 23568654 7899999999987
Q ss_pred C--CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCC
Q 014594 143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREK 218 (422)
Q Consensus 143 ~--~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~ 218 (422)
| +++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ ++
T Consensus 85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~ 163 (388)
T 1j32_A 85 GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-PK 163 (388)
T ss_dssp CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-TT
T ss_pred CCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-cC
Confidence 4 4678999999999999999999999999999999999999999999999999999753 67899999999997 68
Q ss_pred CeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhcccc
Q 014594 219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G 289 (422)
+++|++++|+||||.+++.+++++|++. |+++|+||+|.++.+++. ....+. ..++++++.|+||.+|++|
T Consensus 164 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G 243 (388)
T 1j32_A 164 TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG 243 (388)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc
Confidence 9999999999999999997777776653 999999999999876432 122221 1457899999999999999
Q ss_pred ccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceE
Q 014594 290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNF 364 (422)
Q Consensus 290 ~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f 364 (422)
+|+||+++++++++.+..... .++.+.+.+.++.++|+. .++++ .+++++++++++.+.|++++.+.+ .+.+++|
T Consensus 244 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 323 (388)
T 1j32_A 244 WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY 323 (388)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTE
T ss_pred cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEE
Confidence 999999999999988876543 467889999999888874 46777 889999999999999998854554 4556778
Q ss_pred EEEEeCC-CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 365 ILCEVTS-GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 365 ~~~~~~~-~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+|++++. +.+..++.+.|.+ +||.++++..+..++++||+++..+ +++.+++++|
T Consensus 324 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~--~~i~~~~~~l 380 (388)
T 1j32_A 324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDL--DTIKRGMERL 380 (388)
T ss_dssp ECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCH--HHHHHHHHHH
T ss_pred EEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCH--HHHHHHHHHH
Confidence 8888864 4678899999985 7999999876555789999998533 5566666654
No 22
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-42 Score=338.10 Aligned_cols=325 Identities=19% Similarity=0.318 Sum_probs=269.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.+++++++++.+.+++.+ +.. ...|+.. +..++|+++++++ | ++++ +|++|+|+++++..+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 109 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT 109 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHH
Confidence 3579999999998889999999876 322 3568654 7899999999995 5 5678 99999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++.+++++|
T Consensus 110 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i 188 (386)
T 1u08_A 110 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL 188 (386)
T ss_dssp HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence 9999999999999999999999999999999999754 57899999999996 689999999999999999998777666
Q ss_pred Hc---C-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594 244 LE---M-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (422)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~ 313 (422)
++ . |+++|+||+|.+|.+++. ....+. ..++++++.|+||.+|++|+|+||+++++++++.+..... .++
T Consensus 189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 268 (386)
T 1u08_A 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS 268 (386)
T ss_dssp HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence 54 4 999999999999875432 222222 3578999999999999999999999999999998876543 578
Q ss_pred CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC--CCHHHHHHHHH-hCCcE
Q 014594 314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDLA-KMGVM 388 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--~~~~~~~~~L~-~~gI~ 388 (422)
.+.+.+.++.++|++ .++++ .+++++++++++.+.|+++++....+.+++|+|+++++. .+..++.+.|. ++||.
T Consensus 269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 348 (386)
T 1u08_A 269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVA 348 (386)
T ss_dssp CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEE
T ss_pred CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEE
Confidence 889999999999986 57787 999999999999999998864333456678999999754 57889999887 78999
Q ss_pred EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594 389 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY 422 (422)
Q Consensus 389 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~ 422 (422)
++++..+ ..++++||+++.. .+++.+++++|+
T Consensus 349 v~~g~~f~~~~~~~~~iRis~~~~--~~~i~~~~~~l~ 384 (386)
T 1u08_A 349 AIPLSVFCADPFPHKLIRLCFAKK--ESTLLAAAERLR 384 (386)
T ss_dssp CEEGGGGCSSCCCSCEEEEECCSC--HHHHHHHHHHHT
T ss_pred EeCchHhCCCCCCCCEEEEEEcCC--HHHHHHHHHHHh
Confidence 9987653 2468999999863 366777777663
No 23
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-43 Score=349.86 Aligned_cols=325 Identities=19% Similarity=0.314 Sum_probs=270.5
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~ 163 (422)
+.++|+|+.|.+++++++.+.+++.+ +.. ...|+.. |..+||+++++++ | +++++|++|+|+++++..++
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~ 135 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCL 135 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 45789999999999999999999876 332 2568554 7899999999997 3 46679999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC------------CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
++++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|+++|++.++ +++++|++++|+|||
T Consensus 136 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~npt 214 (447)
T 3b46_A 136 MGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNPI 214 (447)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTTT
T ss_pred HHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCCC
Confidence 99999999999999999999999999999999998532 46899999999997 789999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhh--hcCCcEEEEccChhhhccccccceeeec-CHHHH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSII 302 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~ 302 (422)
|.+++.+++++|++. |+++|+||+|.++.+++. ....+ +..++++++.|+||.++++|+|+||+++ +++++
T Consensus 215 G~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~ 294 (447)
T 3b46_A 215 GKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELL 294 (447)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHH
T ss_pred CcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHH
Confidence 999998888887764 999999999999876442 22222 2357899999999999999999999999 99999
Q ss_pred HHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC----
Q 014594 303 EYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---- 372 (422)
Q Consensus 303 ~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~---- 372 (422)
+.+.... ..++.+++.|.++.++|+. .+|++ ++++++++++++.+.|+++++....|.+++|+|++++..
T Consensus 295 ~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~ 374 (447)
T 3b46_A 295 SYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPE 374 (447)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCT
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCcc
Confidence 9887654 3578899999999999986 45677 889999999999999998764444577899999999742
Q ss_pred -----------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 -----------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 -----------~~~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+..++++.|. ++||.+.++..+. .++++||+++.. .++|++++++|
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~--~e~l~~~~~~l 440 (447)
T 3b46_A 375 DYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKD--DAYLENAVERL 440 (447)
T ss_dssp TCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSC--HHHHHHHHHHG
T ss_pred ccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence 35668888887 6899999876532 268999999864 36688888776
No 24
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.9e-42 Score=337.46 Aligned_cols=324 Identities=23% Similarity=0.385 Sum_probs=269.0
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~-i~~~~G~~~al~~~~~ 164 (422)
.++|+|+.|++++++++++.+++.+ +. ....|+.. +..++|+++++++ | +++++ |++|+|+++++..+++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 105 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS 105 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHH
Confidence 4689999999999889999988876 32 23568654 7899999999998 7 56789 9999999999999999
Q ss_pred HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ .++++|++++|+||||.+++.+++++
T Consensus 106 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~ 184 (389)
T 1gd9_A 106 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE 184 (389)
T ss_dssp TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHH
Confidence 9999999999999999999999999999999999653 57899999999997 58999999999999999999777777
Q ss_pred HHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C
Q 014594 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y 312 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~ 312 (422)
|++. |+++|+||+|.++.+++. ....+. ..+++++++|+||.+|++|+|+||+++++++++.+...... +
T Consensus 185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 264 (389)
T 1gd9_A 185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT 264 (389)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhcc
Confidence 7653 999999999999876432 222222 24678999999999999999999999999999988876553 6
Q ss_pred CCcHHHHHHHHHHccCC-h--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014594 313 NVSVAAEVAACAALQNP-I--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG 386 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~-~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~g 386 (422)
+.+.+.+.++.++|++. . +++ .+++++++++++.+.|+++++....+.+++|+|++++. +.+..++.+.|. ++|
T Consensus 265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 344 (389)
T 1gd9_A 265 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR 344 (389)
T ss_dssp SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCC
Confidence 78999999999999873 3 666 88899999999999999885333345667889999874 568899999998 899
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.++++..+. .++++||+++.. .+++.+++++|
T Consensus 345 i~v~~g~~~~~~~~~~iRi~~~~~--~~~i~~~l~~l 379 (389)
T 1gd9_A 345 VAVVPGSAFGKAGEGYVRISYATA--YEKLEEAMDRM 379 (389)
T ss_dssp EECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred EEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9999886532 368999999863 35677766654
No 25
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.3e-42 Score=341.00 Aligned_cols=320 Identities=20% Similarity=0.314 Sum_probs=261.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CC-----CCCC-CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KF-----PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-----~~~y-~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~ 161 (422)
.++|+|+.|.+++++++.+.+++.+. .. ...| +..+..++|+++++++ | +++++|++|+|+++++..
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI 114 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence 56899999988888999999988762 22 2567 4567899999999986 3 678999999999999999
Q ss_pred HHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++++++++| |+|+++.|+|..+...++..|++++.+|.+ +++.+|+++++++++ +++++|++++||||||.+++.++
T Consensus 115 ~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~ 193 (398)
T 3ele_A 115 CFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEET 193 (398)
T ss_dssp HHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC-TTEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC-cCCCEEEEcCCCCCCCCCCCHHH
Confidence 999999999 999999999999999999999999999965 367899999999997 68999999999999999999888
Q ss_pred HHHHHc----------CCCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhccccccceeeecCHHH------H
Q 014594 240 LLKILE----------MPILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI------I 302 (422)
Q Consensus 240 l~~i~~----------~~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~------~ 302 (422)
+.+|++ .|+++|+||+|.+|.+++.. .......+++++++||||.+|++|+|+||+++++++ .
T Consensus 194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 273 (398)
T 3ele_A 194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY 273 (398)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence 886543 48999999999998865422 222345678999999999999999999999998763 3
Q ss_pred HHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594 303 EYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 303 ~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
+.+.. ....++.+.+.+.++..++++.. .+++++++++++.+.|++++.....+.+++|+|++++. .+..++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 349 (398)
T 3ele_A 274 AAVCGAGRALGYVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALE-DDSNAFC 349 (398)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSS-SCHHHHH
T ss_pred HHHHHHhhhccccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCC-CCHHHHH
Confidence 33322 22356788899998888887654 45677888999999998876444456677889999984 4788999
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|.++||.++++..+..++++||+++.++ +++++++++|
T Consensus 350 ~~l~~~gi~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l 389 (398)
T 3ele_A 350 EKAKEEDVLIVAADGFGCPGWVRISYCVDR--EMIKHSMPAF 389 (398)
T ss_dssp HHHHTTTEECEESGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 999999999999887766899999998533 4555555544
No 26
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=7.2e-43 Score=339.53 Aligned_cols=317 Identities=20% Similarity=0.290 Sum_probs=266.3
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++|+|+.|++++++++.+.+++.+ +. ....|+.. +..++|++++++++ +++++|++|+|+++++..++
T Consensus 27 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~ 106 (370)
T 2z61_A 27 EGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFAL 106 (370)
T ss_dssp TTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHH
T ss_pred cCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHH
Confidence 456789999999999888999988876 32 23568654 78999999999974 67789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
++++++||+|+++.|+|+.+...++..|++++.++ +|++++++.++ +++++|++++|+||||.+++.+ +.++
T Consensus 107 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~-l~~~ 178 (370)
T 2z61_A 107 SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS-DKTKAIIINSPSNPLGEVIDRE-IYEF 178 (370)
T ss_dssp HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC-SSEEEEEEESSCTTTCCCCCHH-HHHH
T ss_pred HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc-cCceEEEEcCCCCCcCcccCHH-HHHH
Confidence 99999999999999999999999999999999987 78999999997 5899999999999999999999 9999
Q ss_pred HcC-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHH
Q 014594 244 LEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVA 317 (422)
Q Consensus 244 ~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~ 317 (422)
++. |+++|+||+|.++.+++.. ...+ +..+++++++||||.+|++|+|+||+++++++++.+..... .++.+++
T Consensus 179 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T 2z61_A 179 AYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTI 258 (370)
T ss_dssp HHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHH
T ss_pred HHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHH
Confidence 987 9999999999998764321 2222 24578999999999999999999999999999998876554 3688999
Q ss_pred HHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCC
Q 014594 318 AEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYN 393 (422)
Q Consensus 318 ~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~ 393 (422)
.+.++.++|+. .++++ .+++++++++++.+.|++++.....+.+++|+|++++. +..++.+.|. ++||.++++.
T Consensus 259 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~ 336 (370)
T 2z61_A 259 SQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGI 336 (370)
T ss_dssp HHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC--CHHHHHHHHHHhCCEEEeCch
Confidence 99999999985 46677 88899999999999999885333345667889999874 7889999997 7899999986
Q ss_pred CCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 394 NKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 394 ~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+. .++++||+++.++ +++.+++++|
T Consensus 337 ~f~~~~~~~~Ri~~~~~~--~~i~~~~~~l 364 (370)
T 2z61_A 337 GFGSKGKNYIRISYANSY--ENIKEGLERI 364 (370)
T ss_dssp GGCGGGSSBEEEECCSCH--HHHHHHHHHH
T ss_pred hhCCCCCCEEEEEEeCCH--HHHHHHHHHH
Confidence 543 3689999999533 5677777665
No 27
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.1e-42 Score=346.80 Aligned_cols=324 Identities=23% Similarity=0.379 Sum_probs=265.1
Q ss_pred CCeEEcCCCCCCCC--CCHHHHHHHhc-CCC----CCCCCC-cchHHHHHHHHHHc----CC-CCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYG--PPPEVREALGQ-LKF----PYIYPD-PESRRLRAALAKDS----GL-ESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~-~~~----~~~y~~-~~~~~lr~~la~~~----~~-~~~~i~~~~G~~~al~~ 161 (422)
+++|+|+.|.++.. +++++.+++.+ +.. ...|+. .+..+||+++++++ |+ ++++|++|+|++++++.
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~ 155 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL 155 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence 46899999876543 66788887765 221 146754 47899999999999 88 78899999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----c-CCCeEEE-EeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~~~ 235 (422)
++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|+++|++.++ + .++++|+ +++|+||||.++
T Consensus 156 ~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~ 234 (448)
T 3aow_A 156 IGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTM 234 (448)
T ss_dssp HHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC
T ss_pred HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCC
Confidence 99999999999999999999999999999999999997544 599999999986 3 3789985 569999999999
Q ss_pred CHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (422)
Q Consensus 236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~ 308 (422)
+.+++++|++. |+++|+||+|.++.+++. .+..++..+++++++||||.++ +|+|+||+++++++++.+...
T Consensus 235 ~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~ 313 (448)
T 3aow_A 235 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIA 313 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHH
Confidence 99877777654 999999999999876432 2333344578999999999999 999999999999999988766
Q ss_pred cCC--CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHcc-CC-CCc-ccCCCceEEEEEeCCCCCHHHHH
Q 014594 309 KQP--YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKD-VP-FLN-PYPSYSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 309 ~~~--~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~-~~-~~~-~~p~~~~f~~~~~~~~~~~~~~~ 379 (422)
... ++.+++.|.++.++|++. ++++ +++.++++++.+.+.|++ ++ .+. ..|.+++|+|++++++.+..++.
T Consensus 314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~ 393 (448)
T 3aow_A 314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML 393 (448)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence 543 677999999999999875 5566 888899999999999987 44 344 35778999999998777899999
Q ss_pred HHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|.++||.++++..+ ..++++||+++... .+++++++++|
T Consensus 394 ~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~-~e~i~~~~~~L 438 (448)
T 3aow_A 394 ERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVD-EDKIMEGIKRL 438 (448)
T ss_dssp HHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSC-THHHHHHHHHH
T ss_pred HHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCC-HHHHHHHHHHH
Confidence 9999889999987653 24689999998632 24555555554
No 28
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.9e-42 Score=343.17 Aligned_cols=326 Identities=19% Similarity=0.284 Sum_probs=270.7
Q ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHcC-----CCCCCEEEeCCHHHHH
Q 014594 93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI 159 (422)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~~-----~~~~~i~~~~G~~~al 159 (422)
++.++|+|+.|.+. +++++.+.+++.+. . ....| +..+..++|++++++++ +++++|++|+|+++++
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al 131 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI 131 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence 45678999999864 68899999998762 2 23567 55689999999999998 7889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
+.+++.++++||+|+++.|+|..+...++..|++++.++.. .++.+|++++++.++ .++++|++++|+||||.+++.
T Consensus 132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~ 210 (427)
T 3dyd_A 132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSK 210 (427)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc-cCCCEEEEECCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999853 467899999999997 579999999999999999997
Q ss_pred HHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-------HHHHH
Q 014594 238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIE 303 (422)
Q Consensus 238 e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-------~~~~~ 303 (422)
+++++|++. |+++|+||+|.+|.+++. ....+....++++++||||.|+++|+|+||++++ +++++
T Consensus 211 ~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~ 290 (427)
T 3dyd_A 211 RHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD 290 (427)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHH
Confidence 666666553 999999999999876442 2333444567899999999999999999999986 56777
Q ss_pred HHHHhc-CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CC
Q 014594 304 YLWRAK-QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GM 373 (422)
Q Consensus 304 ~l~~~~-~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~ 373 (422)
.+.... ..++.+.+.+.++.++|++ .++++ ++++++++++++.+.|++++.+. +.|++++|+|++++. +.
T Consensus 291 ~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~ 370 (427)
T 3dyd_A 291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE 370 (427)
T ss_dssp HHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCS
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCC
Confidence 776553 2588999999999999984 56777 88999999999999999985555 468889999998862 35
Q ss_pred CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 374 DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 374 ~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+..++++.|. ++||.+.++..+..++++||+++.++ +++++++++|
T Consensus 371 ~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l 417 (427)
T 3dyd_A 371 NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPE--VMMLEACSRI 417 (427)
T ss_dssp SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCH--HHHHHHHHHH
Confidence 7788998886 89999999887667899999998543 4566666654
No 29
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.1e-42 Score=345.61 Aligned_cols=325 Identities=17% Similarity=0.144 Sum_probs=273.1
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CC-CCCCCc-chHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FP-YIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM 163 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~-~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~ 163 (422)
+.++|+|+.|++++++++++.+++.+ +. .. ..|+.. +..++|++++++++ +++++|++|+|++++++.++
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~ 122 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF 122 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence 46789999999999999999999876 32 23 567654 67999999999986 67889999999999999999
Q ss_pred HHhc--CCCC--EEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 164 RCVL--DPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 164 ~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
++++ ++|| +|+++.|+|..+...++..|++++.++. ++++.+|+++++++++++++++|++++||||||.+++.+
T Consensus 123 ~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~ 202 (437)
T 3g0t_A 123 LVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE 202 (437)
T ss_dssp HHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH
T ss_pred HHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH
Confidence 9998 9999 9999999999999999999999999996 456678999999999547899999999999999999988
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCc-hh-------hhhhc-CCcEEEEccChhhhccccccceeeecCHHHHH-H
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLES-RM-------EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-Y 304 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~-------~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~-~ 304 (422)
++++|++. |+++|+||+|.++.+++. .. ..+.. .++++++.|+||.+|++|+|+||+++++++++ .
T Consensus 203 ~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 282 (437)
T 3g0t_A 203 ELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYERE 282 (437)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCB
T ss_pred HHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhh
Confidence 87777653 999999999998775421 22 23333 78899999999999999999999999999888 6
Q ss_pred -----------------HHHhcC--CCCCcHHHHHHHHHHccCCh-H---HH-HHHHHHHHHHHHHHHHccCCCCccc--
Q 014594 305 -----------------LWRAKQ--PYNVSVAAEVAACAALQNPI-Y---LE-VKEALIKERERLFKLLKDVPFLNPY-- 358 (422)
Q Consensus 305 -----------------l~~~~~--~~~~~~~~~~aa~~~L~~~~-~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~-- 358 (422)
+..... .++.+.+.+.++.++|++.+ | ++ .+++++++++.+.+.|++++ +.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~ 361 (437)
T 3g0t_A 283 YPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNG-FNIVYD 361 (437)
T ss_dssp CGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-EEESSC
T ss_pred hhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CEEecc
Confidence 554433 47899999999999998754 3 66 99999999999999999985 4444
Q ss_pred -----C-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC--CCeEEEEec--ChhhHHHHHHHHhh
Q 014594 359 -----P-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL--KGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 359 -----p-~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~--~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
| ..++|+|++++ +.+..++.+.|.++||.++++..++. ++++||+++ +.++++++.++|++
T Consensus 362 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~ 432 (437)
T 3g0t_A 362 KDGNEPLADGFYFTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQM 432 (437)
T ss_dssp EETTEECCSSSEEEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHH
T ss_pred ccCCCCCceeEEEEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 5 88999999998 77899999999999999999876432 378999998 45666666666654
No 30
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=3.5e-42 Score=341.36 Aligned_cols=323 Identities=19% Similarity=0.255 Sum_probs=260.1
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcCC-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCEEEe
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHILVG 152 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~~~ 152 (422)
..+|+|+.++|++++ +.+.+++.+.. ....|+++ |..++|++++++++ +++++|++|
T Consensus 36 ~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~ 114 (428)
T 1iay_A 36 NGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA 114 (428)
T ss_dssp TSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred CceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence 468999999999975 57888877421 12568766 68999999999986 778999999
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEE
Q 014594 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFL 224 (422)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l 224 (422)
+|+++++..++++++++||+|+++.|+|+.+...+ ...|++++.++.+ ++|.+|++++++++++ .++++|++
T Consensus 115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 194 (428)
T 1iay_A 115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL 194 (428)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence 99999999999999999999999999999887644 3689999999965 4578999999998863 37899999
Q ss_pred eCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCCc---h-hhhhhc-------CCcEEEEccChhhhcccc
Q 014594 225 TSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---R-MEWVKK-------HDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~-~~~~~~-------~~~~i~~~S~SK~~~~~G 289 (422)
++||||||.+++.+++++|++ . |+++|+||+|.++.+++. . ...... .++++++.||||.+|++|
T Consensus 195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G 274 (428)
T 1iay_A 195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274 (428)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence 999999999999666666554 4 999999999999765421 1 222222 588999999999999999
Q ss_pred ccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCc
Q 014594 290 LRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYP-SYS 362 (422)
Q Consensus 290 ~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~ 362 (422)
+|+||+++ ++++++.+.+...+++.+.++|.++.++|++.+ +++ .+++++++++++.+.|++++ +.+.+ ..+
T Consensus 275 lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g 353 (428)
T 1iay_A 275 FRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-IKCLKNNAG 353 (428)
T ss_dssp GCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSS
T ss_pred ceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCee
Confidence 99999999 688999888877778899999999999999865 556 88889999999999999885 44444 478
Q ss_pred eEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCCC--CCCeEEEEec--ChhhHHHHHHHHh
Q 014594 363 NFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNKE--LKGYVRVSVG--KPEHTDALMECLM 419 (422)
Q Consensus 363 ~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~~~--~~~~iRis~~--~~~~~~~l~~al~ 419 (422)
+|+|++++... +..++.+.|.++ ||.++++..+. .++++||+++ +.++++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~ 421 (428)
T 1iay_A 354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIR 421 (428)
T ss_dssp SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHH
T ss_pred EEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHH
Confidence 99999997421 345788898865 99999977532 2579999998 4455555555544
No 31
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=1.9e-42 Score=340.97 Aligned_cols=324 Identities=22% Similarity=0.316 Sum_probs=268.5
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~~~ 163 (422)
.++|+|+.|++++++++.+.+++.+. . ...+|+.. +..++|++++++++ +++ ++|++|+|+++++..++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 56899999999999999999998863 2 22578654 68999999999985 667 79999999999999999
Q ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-----------CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----------SDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (422)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (422)
++++++||+|+++.|+|..+...++..|++++.++.+ .++.+|+++++++++ +++++|++++|+||||
T Consensus 103 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~nptG 181 (410)
T 3e2y_A 103 QGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-SKTKAIILNTPHNPLG 181 (410)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-TTEEEEEEESSCTTTC
T ss_pred HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-CCceEEEEeCCCCCCC
Confidence 9999999999999999999999999999999999854 355689999999997 6899999999999999
Q ss_pred cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhh-hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594 233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (422)
Q Consensus 233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~ 304 (422)
.+++.+++++|++. |+++|+||+|.+|.+++. ... .....+++++++||||.+|++|+|+||+++++++++.
T Consensus 182 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~ 261 (410)
T 3e2y_A 182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKH 261 (410)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHH
Confidence 99998888888764 999999999999876442 122 2224578999999999999999999999999999998
Q ss_pred HHHhcC--CCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--
Q 014594 305 LWRAKQ--PYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-- 371 (422)
Q Consensus 305 l~~~~~--~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-- 371 (422)
+..... .++.+++.+.++.++|++ .++++ .+++++++++++.+.|+++++....|.+++|+|++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 341 (410)
T 3e2y_A 262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG 341 (410)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence 876644 578899999999998873 56777 88999999999999999986544678889999998853
Q ss_pred -CCC--------HHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 -GMD--------AKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 -~~~--------~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.+ ..++.+.|+ ++||.+.++..+. ..+++||+++.+ .++|.+++++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~l~~~l~~l 406 (410)
T 3e2y_A 342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKK--DSTLDAAEEIF 406 (410)
T ss_dssp CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCC--HHHHHHHHHHH
T ss_pred cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence 121 347777665 7899999987642 358999999873 35577766655
No 32
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.1e-42 Score=343.97 Aligned_cols=324 Identities=19% Similarity=0.306 Sum_probs=268.4
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCCc-chHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLI 162 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~y~~~-~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~~ 162 (422)
.++|+|+.|++++++++.+.+++.+ +.. ...|+.. +..++|++++++++ +++ ++|++|+|++++++.+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA 107 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence 4679999999999999999999876 322 2578654 78999999999875 666 6999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC------------CCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
++.++++||+|+++.|+|..+...++..|++++.++.+. ++.+|+++++++++ +++++|++++||||
T Consensus 108 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~np 186 (422)
T 3fvs_A 108 FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNNP 186 (422)
T ss_dssp HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-CCceEEEECCCCCC
Confidence 999999999999999999999999999999999998653 45689999999997 68999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
||.+++.+++++|++. |+++|+||+|.+|.+++. ..... ...+++++++|+||.+|++|+|+||++++++++
T Consensus 187 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~ 266 (422)
T 3fvs_A 187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM 266 (422)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHH
Confidence 9999988877777664 999999999999876442 22222 235789999999999999999999999999999
Q ss_pred HHHHHhcC--CCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594 303 EYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 303 ~~l~~~~~--~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 371 (422)
+.+..... .++.+++.+.++.++|++ .++++ .+++++++++++.+.|++++.....|.+++|+|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 346 (422)
T 3fvs_A 267 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD 346 (422)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred HHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechh
Confidence 98876544 578899999999999873 46777 89999999999999999986444678889999998852
Q ss_pred ---CCC----------HHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 372 ---GMD----------AKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 372 ---~~~----------~~~~~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
..+ ..++.+.|+ ++||.+.+|..+ ...+++||+++.+ .+++.+++++|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l 415 (422)
T 3fvs_A 347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKD--EATLQAMDEKL 415 (422)
T ss_dssp HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCC--HHHHHHHHHHH
T ss_pred hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 111 557787765 689999997753 3478999999873 35576666654
No 33
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5e-43 Score=341.15 Aligned_cols=326 Identities=14% Similarity=0.132 Sum_probs=269.1
Q ss_pred HhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHH
Q 014594 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSG------LESDHILVGCGADELID 160 (422)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~ 160 (422)
.|+..++++|||+.|+++++++|++.+++.+ +.. ...|+..+ .++|++++++++ +++++|++|+|++++++
T Consensus 17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLY 95 (377)
T ss_dssp HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHH
Confidence 3445678899999999999999999999876 332 36786555 889999999987 78899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
.++++++++||+|+++.|+|..+...++..|++++.++.+.+ +|++++++.++ .+++++++++|+||||.+++.+++
T Consensus 96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l 172 (377)
T 3fdb_A 96 IAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWL 172 (377)
T ss_dssp HHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999997665 99999999997 579999999999999999999999
Q ss_pred HHHHcC----CCeEEEccCCccccCCC--c--hhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC-
Q 014594 241 LKILEM----PILVVLDEAYTEFSGLE--S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ- 310 (422)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~- 310 (422)
.+|++. |+++|+||+|.++.+++ . ....+...++++++.||||.+|++|+|+||+++ ++++++.+.....
T Consensus 173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3fdb_A 173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPV 252 (377)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHH
T ss_pred HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHh
Confidence 888653 99999999999987654 1 222222367889999999999999999999887 7888888876543
Q ss_pred -CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCC-CCHHHHHHHHHh
Q 014594 311 -PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSG-MDAKKLKDDLAK 384 (422)
Q Consensus 311 -~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~L~~ 384 (422)
.++.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++.. .+ .++.+.|++
T Consensus 253 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 331 (377)
T 3fdb_A 253 IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSEFFIE 331 (377)
T ss_dssp HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHHHHHH
Confidence 368899999999999887 46677 889999999999999988 655554 455566779999853 33 567777764
Q ss_pred -CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 -MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 -~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.++++..+. .++++||+++.++ +++.+++++|
T Consensus 332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~~--e~i~~~l~~l 369 (377)
T 3fdb_A 332 KAKVAMNDGAWFGEDGTGFCRLNFATSR--EVLEEAIDRM 369 (377)
T ss_dssp HHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred hCCEEecCChhccCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence 599999987643 3689999999743 5566666654
No 34
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-42 Score=341.25 Aligned_cols=332 Identities=24% Similarity=0.349 Sum_probs=270.4
Q ss_pred HHHHhCCCCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeC
Q 014594 86 LSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS------GLESDHILVGC 153 (422)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~ 153 (422)
.+.+++..++++|+|+.+++ ++++++.+.+++.+ +.. ...|+.. +..++|+++++++ ++++++|++|+
T Consensus 29 ~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~ 108 (406)
T 1xi9_A 29 PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTA 108 (406)
T ss_dssp CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcC
Confidence 44444445677899999999 78888999988865 322 2467654 6799999999997 46788999999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
|+++++..++++++++||+|+++.|+|+.+...++..|++++.++.+ +++.+|++++++.++ .++++|++++|+|||
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~npt 187 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPT 187 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC-cCceEEEEECCCCCC
Confidence 99999999999999999999999999999999999999999999864 356789999999997 589999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCc-EEEEccChhhhccccccceeee--cCH---
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGA--FPL--- 299 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~-~i~~~S~SK~~~~~G~r~G~i~--~~~--- 299 (422)
|.+++.+++++|++. |+++|+||+|.++.+++. ....++ .++ +++++||||.++++|+|+||++ +++
T Consensus 188 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (406)
T 1xi9_A 188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL 266 (406)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhH
Confidence 999997777776653 999999999999876322 233333 577 8999999999999999999999 898
Q ss_pred -HHHHHHHHhcCC-CCCcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC--C
Q 014594 300 -SIIEYLWRAKQP-YNVSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G 372 (422)
Q Consensus 300 -~~~~~l~~~~~~-~~~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--~ 372 (422)
++++.+...... ++.+.+.+.++.++|+ ..++++ .+++++++++++.+.|++++.+.+ .+.+++|+|++++. +
T Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (406)
T 1xi9_A 267 SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW 346 (406)
T ss_dssp HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC
Confidence 999888765433 7888899999999995 445667 889999999999999998854554 45567888888875 5
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCCC--CCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLA-KMGVMIRHYNNKEL--KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~-~~gI~v~~~~~~~~--~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+..++.+.|. ++||.++++..++. ++++||+++..+ +++.+++++|
T Consensus 347 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~--~~i~~~~~~l 396 (406)
T 1xi9_A 347 KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPI--EILEEAMDRF 396 (406)
T ss_dssp SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 67889999987 89999998875433 689999998433 5566666654
No 35
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=7.2e-42 Score=335.72 Aligned_cols=331 Identities=15% Similarity=0.231 Sum_probs=268.2
Q ss_pred HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594 88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (422)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al 159 (422)
.++|..+.++++|+.+++++++++++.+++.+. . ....|+.. ..++|+++++++ | +++++|++|+|+++++
T Consensus 24 ~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~ 102 (399)
T 1c7n_A 24 SQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAV 102 (399)
T ss_dssp HHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred hhccccCCCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHH
Confidence 445543457899999999999999999998763 2 23567665 889999999985 6 6788999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-C--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
..++++++++||+|+++.|+|+.+...++..|++++.++.+ + ++.+|++++++.++++++++|++++|+||||.+++
T Consensus 103 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (399)
T 1c7n_A 103 FNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK 182 (399)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999864 2 24599999999997568999999999999999999
Q ss_pred HHHHHHHHc---C-CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecC-HHHHHHHH
Q 014594 237 DEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLW 306 (422)
Q Consensus 237 ~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~ 306 (422)
.+++++|++ . |+++|+||+|.+|.+++. ....+.. .++++++.|+||.+|++|+|+||++++ +++++.+.
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~ 262 (399)
T 1c7n_A 183 KDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFT 262 (399)
T ss_dssp HHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHH
Confidence 666666654 3 999999999999875432 2222222 478899999999999999999999996 67888887
Q ss_pred HhcCCC---CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHHH
Q 014594 307 RAKQPY---NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKKL 378 (422)
Q Consensus 307 ~~~~~~---~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~~ 378 (422)
.....+ +.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+. +.+++++|+++++ +.+..++
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (399)
T 1c7n_A 263 KSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAM 342 (399)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHH
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHH
Confidence 655443 6789999999888876 46777 888999999999999988 7555544 4455677899975 3678899
Q ss_pred HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 379 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+.|. ++||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 343 ~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~l~~~l~~l 386 (399)
T 1c7n_A 343 EEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL 386 (399)
T ss_dssp HHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHHhCCEEEeCccccCCCCCCeEEEEeccCH--HHHHHHHHHH
Confidence 99997 7899999987533 4689999998763 4576666654
No 36
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=7.7e-42 Score=333.58 Aligned_cols=318 Identities=23% Similarity=0.348 Sum_probs=263.9
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
++|+|+.|++++++++.+.+++.+ +.....|+.. +..++|+++++++++++++|++|+|+++++..++++++++||+|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~V 105 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEV 105 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEE
Confidence 479999999999999999999886 3324568655 78999999999999988999999999999999999999999999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----
Q 014594 174 VDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---- 246 (422)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---- 246 (422)
+++.|+|+.+...++..|++++.++.+ +++.+|++++++.++ +++++|++++|+||||.+++.+++++|++.
T Consensus 106 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~ 184 (381)
T 1v2d_A 106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGERELEAIARLARAH 184 (381)
T ss_dssp EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred EEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 999999999999999999999999975 567899999999996 689999999999999999997777766653
Q ss_pred CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHH
Q 014594 247 PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA 322 (422)
Q Consensus 247 ~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa 322 (422)
|+++|+||+|.++.++. ...... ..++++++.|+||.+|++|+|+||+++++++++.+..... .++.+.+.+.++
T Consensus 185 ~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 263 (381)
T 1v2d_A 185 DLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGV 263 (381)
T ss_dssp TCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred CCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHH
Confidence 99999999999886522 122222 5678999999999999999999999999999888876543 578899999999
Q ss_pred HHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--
Q 014594 323 CAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-- 396 (422)
Q Consensus 323 ~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~-- 396 (422)
.++|+. .++++ .+++++++++++.+.|++.++....+.+++|+|+++++. + +.+.|.++||.++++..+.
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~gi~v~~g~~~~~~ 339 (381)
T 1v2d_A 264 AEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW-D---AFRLVEEARVALIPASAFYLE 339 (381)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC-C---HHHHHHHTCEECEEGGGGCSS
T ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH-h---HHHHHHhCCEEEecchHhCCC
Confidence 888874 45677 889999999999999998764334455678999999743 3 6667779999999876532
Q ss_pred --CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 397 --LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 397 --~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++++||+++.. .+++.+++++|
T Consensus 340 ~~~~~~iRi~~~~~--~~~i~~~~~~l 364 (381)
T 1v2d_A 340 DPPKDLFRFAFCKT--EEELHLALERL 364 (381)
T ss_dssp SCCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 468999999872 35566666554
No 37
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=6e-42 Score=339.67 Aligned_cols=324 Identities=20% Similarity=0.278 Sum_probs=267.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC----CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~ 161 (422)
.++|+|+.|.+++++++.+.+++.+ +.. ...|+.. +..++|+++++++ | ++++ +|++|+|+++++..
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~ 116 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA 116 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence 3579999999999999999999876 322 2568654 7899999999996 6 5678 99999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
++++++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+|||
T Consensus 117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt 195 (429)
T 1yiz_A 117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL 195 (429)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence 9999999999999999999999999999999999999644 46799999999997 689999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~ 303 (422)
|.+++.+++++|++. |+++|+||+|.+|.+++. ....+. ..++++++.|+||.+|++|+|+||+++++++++
T Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (429)
T 1yiz_A 196 GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK 275 (429)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHH
Confidence 999997777776654 999999999999876432 222222 356899999999999999999999999999999
Q ss_pred HHHHhc--CCCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC
Q 014594 304 YLWRAK--QPYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG 372 (422)
Q Consensus 304 ~l~~~~--~~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~ 372 (422)
.+.... ..++.+++.+.++.++|++ .++++ .+++++++++++.+.|+++++....+.+++|+|+++++.
T Consensus 276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~ 355 (429)
T 1yiz_A 276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355 (429)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSS
T ss_pred HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccc
Confidence 887654 3588899999999999887 56777 889999999999999998764334566788999999753
Q ss_pred ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 373 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 373 ------------~~~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+..++.+.|. ++||.++++..+. .++++||+++.. .+++++++++|
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l 422 (429)
T 1yiz_A 356 DSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK--DENLQKAAEIL 422 (429)
T ss_dssp CTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 35678888887 8999999876432 268999999863 35566666654
No 38
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.1e-41 Score=330.23 Aligned_cols=325 Identities=16% Similarity=0.231 Sum_probs=264.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc---chHHHHHHHHHHcC--CCCCCEEEeCCHHHHHHHHHHHh
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP---ESRRLRAALAKDSG--LESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~---~~~~lr~~la~~~~--~~~~~i~~~~G~~~al~~~~~~l 166 (422)
++++|+|+.|+++++++|++.+++.+ +.. ...|+.. -..++++.+++.+| +++++|++|+|++++++.+++++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l 102 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF 102 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh
Confidence 46899999999999999999999876 322 3566543 12344445555557 67889999999999999999999
Q ss_pred cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++||+|+++.|+|..+...++..|++++.++.+. +|.+|++++++.++ +++++|++++|+||||.+++.+++.+|
T Consensus 103 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l~~l 181 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLMLLCSPHNPIGRVWKKEELTKL 181 (383)
T ss_dssp CCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT-TTCCEEEEESSBTTTTBCCCHHHHHHH
T ss_pred CCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC-cCCeEEEEeCCCCCCCcCcCHHHHHHH
Confidence 99999999999999999999999999999999643 34599999999995 789999999999999999999999998
Q ss_pred Hc---C-CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC---
Q 014594 244 LE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--- 310 (422)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~--- 310 (422)
++ . |+++|+||+|.++.+.+. ....... .+++++++||||.+|++|+|+||+++ ++++++.+.....
T Consensus 182 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 261 (383)
T 3kax_A 182 GSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQG 261 (383)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcc
Confidence 55 3 999999999999876442 2222221 47899999999999999999999998 6888888876543
Q ss_pred CCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014594 311 PYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-K 384 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~-~ 384 (422)
.++.+++.+.++.++|++. ++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++. +.+..++.+.|. +
T Consensus 262 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 341 (383)
T 3kax_A 262 FHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEK 341 (383)
T ss_dssp CCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhh
Confidence 3478999999999999874 6677 889999999999999988 665654 45566778899975 468999999998 7
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.++++..+ ..++++||+++.++ +++++++++|
T Consensus 342 ~gi~v~~g~~~~~~~~~~iRi~~~~~~--~~i~~~l~~l 378 (383)
T 3kax_A 342 GKIIVEPGEKYGLGGEEHIGINIGCPR--SVLEEILNRL 378 (383)
T ss_dssp SCEECEESGGGCTTCTTEEEEECSSCH--HHHHHHHHHH
T ss_pred CCEEeECchhhcCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 89999997763 33689999999643 5577777665
No 39
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-41 Score=331.76 Aligned_cols=329 Identities=21% Similarity=0.269 Sum_probs=268.0
Q ss_pred hCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHH
Q 014594 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL 161 (422)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~ 161 (422)
|...++++|+|+.++++++++|++.+++.+ +.. .+.|+.. ..++++++++++ | +++++|++|+|+++++..
T Consensus 22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~ 100 (391)
T 3dzz_A 22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA 100 (391)
T ss_dssp TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence 444567899999999999999999999986 332 3566544 466777776664 5 678899999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e 238 (422)
++++++++||+|+++.|+|..+...++..|++++.++.+ .++.+|+++++++++++++++|++++|+||||.+++.+
T Consensus 101 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~ 180 (391)
T 3dzz_A 101 MVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEE 180 (391)
T ss_dssp HHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHH
T ss_pred HHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHH
Confidence 999999999999999999999999999999999999963 33459999999999767899999999999999999998
Q ss_pred HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecC-HHHHHHHHHh
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA 308 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~ 308 (422)
++++|++. |+++|+||+|.++.+.+. ....... .++++++.|+||.+|++|+|+||++++ +++++.+...
T Consensus 181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~ 260 (391)
T 3dzz_A 181 EVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES 260 (391)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence 88888664 999999999999876442 2222211 467899999999999999999999997 8898888765
Q ss_pred c---CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCC-CCCHHHHHH
Q 014594 309 K---QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKD 380 (422)
Q Consensus 309 ~---~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~ 380 (422)
. ..++.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++. +.+..++.+
T Consensus 261 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
T 3dzz_A 261 FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK 340 (391)
T ss_dssp HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence 3 4578888999988888876 45677 889999999999999998 665654 45566778899975 468999999
Q ss_pred HHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 381 DLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.|. ++||.++++..+. .++++||+++.++ +++.+++++|
T Consensus 341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 382 (391)
T 3dzz_A 341 YLREKTGLIISAGNGYRGNGHEFVRINLACPK--ELVIDGMQRL 382 (391)
T ss_dssp HHHHHHCEECEESGGGCTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHhCCEEEeCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 996 8999999987633 3589999999643 4566666554
No 40
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-41 Score=334.01 Aligned_cols=323 Identities=14% Similarity=0.175 Sum_probs=250.0
Q ss_pred hHHHHHHhCC-CCCCeEEcCCCCC-----CCCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHc-C-----CC
Q 014594 83 FEVLSIQLGR-KPEDIVKIDANEN-----PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LE 145 (422)
Q Consensus 83 ~~~~~~~~~~-~~~~~i~l~~~~~-----~~~~~~~v~~al~~~----~~~~~y-~~~~~~~lr~~la~~~-~-----~~ 145 (422)
+..+..++.. ...++|+|+.|+. ++.+++.+.++.. + ...+.| |..|..+||+++++++ + ++
T Consensus 16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~ 94 (405)
T 3k7y_A 16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE 94 (405)
T ss_dssp HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence 3444444443 2357899999962 2456788888855 3 233678 5569999999999987 2 23
Q ss_pred CCC--EEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc-CC
Q 014594 146 SDH--ILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER-EK 218 (422)
Q Consensus 146 ~~~--i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-~~ 218 (422)
+++ +++|+|+++++.+++..+++ + |+|++++|+|+.|...++..|++++.+|. ++++++|++.+++.+++ .+
T Consensus 95 ~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 173 (405)
T 3k7y_A 95 DKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN 173 (405)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS
T ss_pred ccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC
Confidence 454 59999999999999998887 8 99999999999999999999999999996 34589999999999974 45
Q ss_pred CeEEEEeCC-CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hh-hhhhcCCcEEEEccChhhhcc
Q 014594 219 PKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RM-EWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 219 ~~~i~l~~p-~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~-~~~~~~~~~i~~~S~SK~~~~ 287 (422)
++++++++| |||||.+++.+++++|++. ++++|+||+|.+|.+++. .. ......+++++++||||.|++
T Consensus 174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l 253 (405)
T 3k7y_A 174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL 253 (405)
T ss_dssp SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence 688888754 8999999999999998875 999999999999986421 12 222346799999999999999
Q ss_pred ccccceeeec---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHHHHc
Q 014594 288 AGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFKLLK 350 (422)
Q Consensus 288 ~G~r~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~~L~ 350 (422)
+|+|+||+++ ++++++.+. .. +..+ +.+.++|.++..+|+++ .|.+ ++++++++|+.+.+.|+
T Consensus 254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999864 677665543 22 2334 56788999999999874 3433 66779999999999999
Q ss_pred ----cCCC----CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594 351 ----DVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH 420 (422)
Q Consensus 351 ----~~~~----~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~ 420 (422)
+++. ....|.+|+|+|+.++. ++++.|.++||.+.|+. |||++. +++++++.++|++
T Consensus 334 ~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----~~~~~L~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~~ 400 (405)
T 3k7y_A 334 TYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----KIAEHLKTHHIYIINNG--------RINVSGITKNNVDYIADKICL 400 (405)
T ss_dssp HHGGGGTCCCCGGGGSSCCSSEEECGGGG-----GGTTTTTTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHHH
T ss_pred hhhhhcCCCCCCccccCCceEEEecCCCH-----HHHHHHHHCCEeecCCC--------eEEEeccCHHHHHHHHHHHHH
Confidence 8752 23467888999988752 34566678899999864 999973 5566777777664
No 41
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=9.8e-42 Score=334.74 Aligned_cols=324 Identities=21% Similarity=0.316 Sum_probs=262.2
Q ss_pred CCeEEcCCCCCCC--CCCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 95 EDIVKIDANENPY--GPPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 95 ~~~i~l~~~~~~~--~~~~~v~~al~~~-~~----~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+++|+|+.+.+.. .+++++.+++.+. .. ...|+. .+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~ 111 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF 111 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence 4679999886543 2567888887652 21 256754 47899999999999988899999999999999999999
Q ss_pred cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCccCcCCCHHHHHHHHc
Q 014594 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+++||+|+++.|+|+.+...++..|++++.++.+++ ++|++++++.+++.++++|+ +++|+||||.+++.+++++|++
T Consensus 112 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~ 190 (397)
T 2zyj_A 112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ 190 (397)
T ss_dssp CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 999999999999999999999999999999986544 58999999999755789885 5799999999999997776665
Q ss_pred C----CCeEEEccCCccccCCCc---hhhhhhcC---CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594 246 M----PILVVLDEAYTEFSGLES---RMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (422)
Q Consensus 246 ~----~~~li~Deay~~~~~~~~---~~~~~~~~---~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~ 313 (422)
. |+++|+||+|.++.+++. ....++.. +++++++|+||.++ +|+|+||+++++++++.+...... ++
T Consensus 191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 269 (397)
T 2zyj_A 191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH 269 (397)
T ss_dssp HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence 3 999999999999875432 22233333 78899999999999 999999999999999988765443 56
Q ss_pred CcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHcc-CC-CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014594 314 VSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKD-VP-FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~-~~-~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI 387 (422)
.+++.+.++.++|++. ++++ .+++++++++++.+.|++ ++ ++. ..|.+++|+|++++.+.+..++.+.|.++||
T Consensus 270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi 349 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENV 349 (397)
T ss_dssp CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCC
Confidence 7999999999999987 4566 888899999999999987 44 344 3577889999999877788999999998899
Q ss_pred EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++++..+ ..++++||+++.. +.+++++++++|
T Consensus 350 ~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l 386 (397)
T 2zyj_A 350 AFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRL 386 (397)
T ss_dssp EEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred EEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence 99987653 2468999999864 224455554443
No 42
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=8.2e-42 Score=338.12 Aligned_cols=321 Identities=16% Similarity=0.167 Sum_probs=256.0
Q ss_pred CeEEcCCCCCC---CCCCHHHHHHHhcC----C--CCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHH--HHHH
Q 014594 96 DIVKIDANENP---YGPPPEVREALGQL----K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELI--DLIM 163 (422)
Q Consensus 96 ~~i~l~~~~~~---~~~~~~v~~al~~~----~--~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al--~~~~ 163 (422)
.+|+|+.|+++ +++++.+.+++.+. . ...+|+++ |..+||+++++++++++++|++|+|+++++ .+++
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~ 112 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLIS 112 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHH
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHH
Confidence 37999999998 88888888877642 1 13578765 699999999999999999999999999997 7777
Q ss_pred HHhcCC------------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCc
Q 014594 164 RCVLDP------------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNP 230 (422)
Q Consensus 164 ~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NP 230 (422)
+.+..+ +|+|+++.|+|..|...++..|++++.++.+++ ++|++++++.+++.++++|+ +++||||
T Consensus 113 ~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NP 191 (422)
T 3d6k_A 113 WSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNP 191 (422)
T ss_dssp HHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTT
T ss_pred HHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCC
Confidence 877765 347999999999999999999999999997554 59999999999745789988 5799999
Q ss_pred cCcCCCHHHHHHHHc----C-CCeEEEccCCcc--ccCCCc---hh-hh---hhcCCcEEEEccChhhhccccccceeee
Q 014594 231 DGSIINDEDLLKILE----M-PILVVLDEAYTE--FSGLES---RM-EW---VKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (422)
Q Consensus 231 tG~~~~~e~l~~i~~----~-~~~li~Deay~~--~~~~~~---~~-~~---~~~~~~~i~~~S~SK~~~~~G~r~G~i~ 296 (422)
||.+++.+++++|++ . |+++|+||+|.+ |.+++. .. .. .+..+++++++||||. +++|+|+||++
T Consensus 192 tG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~ 270 (422)
T 3d6k_A 192 TGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFA 270 (422)
T ss_dssp TCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEE
Confidence 999999997776654 4 899999999985 544321 22 11 2356889999999998 77999999999
Q ss_pred cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccC-C---hHHH-HHHHHHHHHHHHHHHHcc----CCCCc-ccCCCceE
Q 014594 297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-P---IYLE-VKEALIKERERLFKLLKD----VPFLN-PYPSYSNF 364 (422)
Q Consensus 297 ~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~-~---~~~~-~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~f 364 (422)
+++++++.+...... ++.+.++|.++.++|++ + ++++ .++.++++++.+.+.|++ ++.+. ..|++++|
T Consensus 271 ~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~ 350 (422)
T 3d6k_A 271 SSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYF 350 (422)
T ss_dssp CCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSC
T ss_pred eCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceE
Confidence 999999988876543 67899999999999998 3 4555 778888888888887764 44344 46778999
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEec--ChhhHHHHHHHHh
Q 014594 365 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVG--KPEHTDALMECLM 419 (422)
Q Consensus 365 ~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~--~~~~~~~l~~al~ 419 (422)
+|++++.. +.+.+.+.|.++||.+++++. + ..++++|||++ +.++++++.++|+
T Consensus 351 ~~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~ 412 (422)
T 3d6k_A 351 ISVDVVPG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFA 412 (422)
T ss_dssp EEEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHH
T ss_pred EEEECCCC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 99999854 678888888899999999433 3 24689999998 4444444444443
No 43
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-41 Score=332.87 Aligned_cols=346 Identities=20% Similarity=0.284 Sum_probs=272.4
Q ss_pred HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHcC--
Q 014594 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDSG-- 143 (422)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~~-- 143 (422)
+.+....++ +...+.....+....++++|+|+.+++++++++.+.+++ + +.. ...|+.. +..++|++++++++
T Consensus 18 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~ 95 (409)
T 2gb3_A 18 DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRR 95 (409)
T ss_dssp HHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHhhcCCcc-HHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 334444443 232333333333334567899999999988889999999 6 432 2467654 68999999999973
Q ss_pred ----CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcC
Q 014594 144 ----LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE 217 (422)
Q Consensus 144 ----~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~ 217 (422)
+++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.++.++ ++.+ +++|++.++ .
T Consensus 96 ~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~-~ 173 (409)
T 2gb3_A 96 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN-E 173 (409)
T ss_dssp SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-T
T ss_pred hCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-c
Confidence 5678999999999999999999999999999999999999999999999999999753 4555 889999887 5
Q ss_pred CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh-cCCcEEEEccChhhhccccccc
Q 014594 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK-KHDNLIVLRTFSKRAGLAGLRV 292 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~ 292 (422)
++++|++++|+||||.+++.+++++|++. |+++|+||+|.++.+++.....+. ..+++++++||||.+|++|+|+
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 253 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARV 253 (409)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCC
T ss_pred CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceE
Confidence 89999999999999999998777777653 999999999999876432222222 2467999999999999999999
Q ss_pred eeeecCH-HHHHHHHHhcCCC-CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEE
Q 014594 293 GYGAFPL-SIIEYLWRAKQPY-NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILC 367 (422)
Q Consensus 293 G~i~~~~-~~~~~l~~~~~~~-~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~ 367 (422)
||+++++ ++++.+......+ +.+++.+.++.++|+. .++++ .+++++++++++.+.|+++++.. ..|.+++|+|+
T Consensus 254 G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 333 (409)
T 2gb3_A 254 GCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITA 333 (409)
T ss_dssp EEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEE
T ss_pred EEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEE
Confidence 9999998 9998887665555 8899999999999975 45666 88899999999999999885433 35667889999
Q ss_pred EeCCCCCHHHHHHHHHhC------CcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 368 EVTSGMDAKKLKDDLAKM------GVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~~~------gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++ +.+..++.+.|.++ ||.++++..+ ..++++||+++..+ +++.+++++|
T Consensus 334 ~~~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~--e~i~~~~~~l 395 (409)
T 2gb3_A 334 ELP-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL 395 (409)
T ss_dssp ECS-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred EeC-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence 997 66889999999876 9999987653 23689999998433 4455555443
No 44
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=5.4e-42 Score=342.06 Aligned_cols=319 Identities=17% Similarity=0.241 Sum_probs=257.5
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCCCC-cchHHHHHHHHHHc----CCCCCCEEEeCCHHHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIYPD-PESRRLRAALAKDS----GLESDHILVGCGADELID 160 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y~~-~~~~~lr~~la~~~----~~~~~~i~~~~G~~~al~ 160 (422)
++.++|+|+.|+++++++|.+.+++.+ +. ....|+. .+..+||+++++++ ++++++|++|+|+++++.
T Consensus 67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~ 146 (449)
T 3qgu_A 67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA 146 (449)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence 456799999999999999999988865 22 2256744 57899999999998 788899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE----------EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
.+ ..++++||+|+++.|+|..+...++..|++ ++.++.++ ++..|++++ +++++|++++||
T Consensus 147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~l~~p~ 219 (449)
T 3qgu_A 147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------KRTDIIFFCSPN 219 (449)
T ss_dssp HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------CCCSEEEEESSC
T ss_pred HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc------CCCCEEEEeCCC
Confidence 99 778999999999999999999999999998 99988643 344554321 578999999999
Q ss_pred CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHH
Q 014594 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
||||.+++.+++++|++. |+++|+||+|.+|.+++. .+..+. ..++++++.||||.+|++|+|+||++++++
T Consensus 220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 299 (449)
T 3qgu_A 220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA 299 (449)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence 999999999998888764 999999999999886542 222222 257789999999999999999999999888
Q ss_pred HHH--------HHHHh--cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594 301 IIE--------YLWRA--KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367 (422)
Q Consensus 301 ~~~--------~l~~~--~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~ 367 (422)
+++ .+... ...++.+++++.++.++|++. ++++ ++++++++++++.+.|+++++....+.+++|+|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 379 (449)
T 3qgu_A 300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWV 379 (449)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEE
T ss_pred HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEE
Confidence 764 33322 233578999999999999872 5666 8899999999999999998754445667999999
Q ss_pred EeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 368 EVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~~-~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++ +.+..++++.|++ +||.++++..+ ..++++||++...+ +++++++++|
T Consensus 380 ~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~--e~i~~~l~~l 433 (449)
T 3qgu_A 380 GFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSR--ENILEAVRRF 433 (449)
T ss_dssp ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred ECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 998 7788999988885 59999998763 34689999986532 4455555544
No 45
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.6e-41 Score=333.64 Aligned_cols=324 Identities=17% Similarity=0.215 Sum_probs=262.5
Q ss_pred CCeEEcCCCCC----CCCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHcC------------CCCCCEEEeCC
Q 014594 95 EDIVKIDANEN----PYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDSG------------LESDHILVGCG 154 (422)
Q Consensus 95 ~~~i~l~~~~~----~~~~~~~v~~al~~-~~--~~~~y~~-~~~~~lr~~la~~~~------------~~~~~i~~~~G 154 (422)
.++|+|+.+.+ .+++++.+.+++.+ +. ....|+. .+..++|++++++++ +++++|++|+|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g 112 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG 112 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence 56899999975 57889999998876 22 2256854 478999999999998 77899999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (422)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (422)
+++++..++++++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ .+++++++++|+||||
T Consensus 113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc-cCCeEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999998543 46799999999997 6789999999999999
Q ss_pred cCCCHHHHHHHHc---C-CCeEEEccCCccccCCCc-------hhhhhhcCCcEEEEccChhhhccccccceeeecCHH-
Q 014594 233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES-------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS- 300 (422)
Q Consensus 233 ~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~-------~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~- 300 (422)
.+++.+++++|++ . |+++|+||+|.++.+++. ....+...+++++++||||.|+++|+|+||++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~ 271 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH 271 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence 9999766666655 3 999999999999875432 122223345689999999999999999999998653
Q ss_pred -----HHHHHHHhc-CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC
Q 014594 301 -----IIEYLWRAK-QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT 370 (422)
Q Consensus 301 -----~~~~l~~~~-~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~ 370 (422)
+...+.... ..++.+++.|.++.++|+. .++++ .+++++++++++.+.|++++.+.+ .|.+++|+|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 351 (416)
T 1bw0_A 272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRID 351 (416)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEEC
T ss_pred hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC
Confidence 333333322 3578899999999999985 46777 888999999999999998854544 4667899999986
Q ss_pred C-----CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 371 S-----GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 371 ~-----~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
. ..+..++.+.|+ ++||.++++..+..++++||+++.++ +++.+++++|
T Consensus 352 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~--e~l~~~l~~l 406 (416)
T 1bw0_A 352 LEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERI 406 (416)
T ss_dssp GGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 3 257888988885 89999999877666789999997543 4577777665
No 46
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-41 Score=335.83 Aligned_cols=320 Identities=17% Similarity=0.186 Sum_probs=261.7
Q ss_pred CCeEEcCCCCC-CCCCCHHH--HHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc-----CCCCCC---EEEeCCHHHHH
Q 014594 95 EDIVKIDANEN-PYGPPPEV--REALGQ-LK--FPYIYPDP-ESRRLRAALAKDS-----GLESDH---ILVGCGADELI 159 (422)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~~v--~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~-----~~~~~~---i~~~~G~~~al 159 (422)
+++|+|+.|++ +++.+|.+ .+++.+ +. ....|++. |..++|+++++++ ++++++ |++|+|+++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al 126 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL 126 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence 56899999999 88877766 777665 32 23678665 7899999999999 888889 99999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEecCCC-CCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCC
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS-DFSLNVELIADAVERE--KPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~ 235 (422)
+.++++++++||+|+++.|+|+.+...++. .|++++.++.++ ++.+|++++++.+++. +++++++++||||||.++
T Consensus 127 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~ 206 (430)
T 2x5f_A 127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP 206 (430)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred HHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence 999999999999999999999999999998 999999999654 4689999999999742 789999999999999999
Q ss_pred CHHHHHHHHc---------CCCeEEEccCCccccCCCc---hhh-hhhc-CCc---EEEEccChhhhccccccceeeec-
Q 014594 236 NDEDLLKILE---------MPILVVLDEAYTEFSGLES---RME-WVKK-HDN---LIVLRTFSKRAGLAGLRVGYGAF- 297 (422)
Q Consensus 236 ~~e~l~~i~~---------~~~~li~Deay~~~~~~~~---~~~-~~~~-~~~---~i~~~S~SK~~~~~G~r~G~i~~- 297 (422)
+.+++++|++ .|+++|+||+|.+|.+++. ... .+.. .++ +++++||||.+|++|+|+||+++
T Consensus 207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~ 286 (430)
T 2x5f_A 207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG 286 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence 9766666553 5899999999999876432 222 3333 677 99999999999999999999999
Q ss_pred --CHHHHHHHHHhc------CCCCCcHHHHHHHHHHcc-CChHHH----HHHHHHHHHHHHHHHHc----cCCCCcccCC
Q 014594 298 --PLSIIEYLWRAK------QPYNVSVAAEVAACAALQ-NPIYLE----VKEALIKERERLFKLLK----DVPFLNPYPS 360 (422)
Q Consensus 298 --~~~~~~~l~~~~------~~~~~~~~~~~aa~~~L~-~~~~~~----~~~~~~~~~~~l~~~L~----~~~~~~~~p~ 360 (422)
++++++.+.... ..++.+++.|.++.++|+ +.+|.+ .+++++++++.+.+.|+ ++++....+.
T Consensus 287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~ 366 (430)
T 2x5f_A 287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFN 366 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCC
T ss_pred cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCC
Confidence 999999887654 347899999999999998 765544 67788999999999998 5543223455
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEec-Ch-hhHHHHHHHHh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVG-KP-EHTDALMECLM 419 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~-~~-~~~~~l~~al~ 419 (422)
+++|+|++++ +.+..++.+.|.+ +||.++++ .++++||+++ .+ ++++++.++|+
T Consensus 367 ~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~ 423 (430)
T 2x5f_A 367 SGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIA 423 (430)
T ss_dssp BSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHH
T ss_pred ceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHH
Confidence 6788999998 7788999999996 99999997 3589999998 43 33454444443
No 47
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=3.7e-41 Score=333.72 Aligned_cols=346 Identities=18% Similarity=0.267 Sum_probs=262.0
Q ss_pred HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHH--H-------------HHHHhcCCCCCCCC-Cc
Q 014594 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE--V-------------REALGQLKFPYIYP-DP 129 (422)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--v-------------~~al~~~~~~~~y~-~~ 129 (422)
++++.+..+.++ ++..+...+.+. +.++|+|+.|.++...+|. . .++... ...|+ ..
T Consensus 6 ~~s~~~~~~~~~-~~~~~~~~~~~~---~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~ 78 (425)
T 2r2n_A 6 FITAASAARNPS-PIRTMTDILSRG---PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR---ALQYSPSA 78 (425)
T ss_dssp GSCHHHHTCCCC-SGGGHHHHHHHS---CTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH---HTSCCCTT
T ss_pred HHHHHHhcCCCc-hHHHHHHHhhcC---CCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh---hcCCCCCC
Confidence 445555555554 233333333322 2467999999887644331 0 011111 13564 45
Q ss_pred chHHHHHHHHHHc----CCCC---------CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEE
Q 014594 130 ESRRLRAALAKDS----GLES---------DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196 (422)
Q Consensus 130 ~~~~lr~~la~~~----~~~~---------~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 196 (422)
|+.+||+++++++ |++. ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN 158 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence 8899999999885 6643 69999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHhhc-----------CCCeEEEE-eCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcccc
Q 014594 197 VPRKSDFSLNVELIADAVER-----------EKPKCIFL-TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS 260 (422)
Q Consensus 197 v~~~~~~~~d~~~l~~~i~~-----------~~~~~i~l-~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~ 260 (422)
++.+++ ++|+++|++.+++ .++++|++ ++||||||.+++.+++++|++. |+++|+||+|.++.
T Consensus 159 v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 159 VASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp ECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred eCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 997543 6999999999862 36888887 5999999999999977776653 99999999999887
Q ss_pred CCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC------C
Q 014594 261 GLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN------P 329 (422)
Q Consensus 261 ~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~------~ 329 (422)
+++. .+..++..+++++++||||.++ +|+|+||+++++++++.+..... .++.+.+.|.++.++|++ .
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 316 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM 316 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHH
Confidence 5432 2233344578999999999998 99999999999999998876543 478899999999999986 2
Q ss_pred hHHH-HHHHHHHHHHHHHHHHcc-CCCC-c-ccCCCceEEEEEeCCCCCHHH-HHHHHHhCCcEEEeCCCCC-----CCC
Q 014594 330 IYLE-VKEALIKERERLFKLLKD-VPFL-N-PYPSYSNFILCEVTSGMDAKK-LKDDLAKMGVMIRHYNNKE-----LKG 399 (422)
Q Consensus 330 ~~~~-~~~~~~~~~~~l~~~L~~-~~~~-~-~~p~~~~f~~~~~~~~~~~~~-~~~~L~~~gI~v~~~~~~~-----~~~ 399 (422)
+|++ ++++++++++.+.+.|++ ++.+ . ..|.+|+|+|+++++..+..+ +.+.|.++||.++++..+. ..+
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~ 396 (425)
T 2r2n_A 317 AHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP 396 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCC
Confidence 4566 888999999999999987 4444 3 457889999999986555556 5778889999999987632 358
Q ss_pred eEEEEecChhhHHHHHHHHhhh
Q 014594 400 YVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 400 ~iRis~~~~~~~~~l~~al~~l 421 (422)
++||+++.. +.+++.+++++|
T Consensus 397 ~iRis~~~~-~~~~i~~~~~~l 417 (425)
T 2r2n_A 397 YLRASFSSA-SPEQMDVAFQVL 417 (425)
T ss_dssp EEEEECSSC-CHHHHHHHHHHH
T ss_pred EEEEEeCCC-CHHHHHHHHHHH
Confidence 999999722 124455555543
No 48
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=7.7e-41 Score=327.50 Aligned_cols=323 Identities=21% Similarity=0.248 Sum_probs=259.1
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHH-HHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRR-LRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~-lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~ 165 (422)
+++|+|+.+++++++++++.+++.+ +.. ...|+.. ..+ +|+++++++ | +++++|++|+|++++++.++++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 4689999999999999999999876 322 3567665 677 999999986 5 6788999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++++||+|+++.|+|+.+...++..|++++.+|.+. +|.+|++++++.+++.++++|++++|+||||.+++.+++++
T Consensus 107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~ 186 (390)
T 1d2f_A 107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186 (390)
T ss_dssp SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999998642 34599999999997458999999999999999999666655
Q ss_pred HHc---C-CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC---C
Q 014594 243 ILE---M-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ---P 311 (422)
Q Consensus 243 i~~---~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~---~ 311 (422)
|++ . |+++|+||+|.++.+++.. ...+...-... +.||||.+|++|+|+||++++ +++++.+..... .
T Consensus 187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 265 (390)
T 1d2f_A 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG 265 (390)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc
Confidence 554 3 9999999999998764321 11121110024 999999999999999999985 788888776543 4
Q ss_pred C-CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCCC-CCHHHHHHHHH-h
Q 014594 312 Y-NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLA-K 384 (422)
Q Consensus 312 ~-~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~~-~~~~~~~~~L~-~ 384 (422)
+ +.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+. +.+++++|++++.. .+..++.+.|. +
T Consensus 266 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 345 (390)
T 1d2f_A 266 LSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQ 345 (390)
T ss_dssp CCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHH
Confidence 4 7899999999888875 46777 888999999999999988 6555544 44456778999753 67889999998 7
Q ss_pred CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 346 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l 382 (390)
T 1d2f_A 346 EKVAIMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL 382 (390)
T ss_dssp TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred cCEEeeCccccCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 899999987542 4689999999753 5677777765
No 49
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.6e-40 Score=324.85 Aligned_cols=329 Identities=20% Similarity=0.318 Sum_probs=264.5
Q ss_pred HHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHH----HHcC--CCCCCEEEeCCHHH
Q 014594 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADE 157 (422)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la----~~~~--~~~~~i~~~~G~~~ 157 (422)
...+++ +.++|+|+.++++++++|++.+++.+ +.. .+.|+. +..+++++++ +++| +++++|++|+|+++
T Consensus 25 ~~~~~~--~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~ 101 (391)
T 4dq6_A 25 MEKKYG--TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIP 101 (391)
T ss_dssp HHHHHS--CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred cccccC--CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHH
Confidence 344555 36789999999999999999999986 332 345643 2345555555 4567 67889999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC----CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++.++++++++||+|+++.|+|..+...++..|++++.++.+ .++.+|+++++++++ . +++|++++|+||||.
T Consensus 102 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~-~~~v~i~~p~nptG~ 179 (391)
T 4dq6_A 102 AISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK-D-VKLFILCNPHNPVGR 179 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT-T-EEEEEEESSBTTTTB
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh-c-CCEEEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999865 234589999999997 4 999999999999999
Q ss_pred CCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecCH-HHHH
Q 014594 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE 303 (422)
Q Consensus 234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~ 303 (422)
+++.+++++|++. |+++|+||+|.+|.+++. ....+.. .++++++.|+||.+|++|+|+||+++++ ++++
T Consensus 180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 259 (391)
T 4dq6_A 180 VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK 259 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH
Confidence 9999888888653 999999999999876442 2222211 4788999999999999999999999875 8888
Q ss_pred HHHHhc---CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCC-CCCH
Q 014594 304 YLWRAK---QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDA 375 (422)
Q Consensus 304 ~l~~~~---~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~-~~~~ 375 (422)
.+.... ..++.+.+.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++. +.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (391)
T 4dq6_A 260 LLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD 339 (391)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCH
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCH
Confidence 877653 3457899999999888876 46677 889999999999999987 665654 45556777899985 6789
Q ss_pred HHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 376 KKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 376 ~~~~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++.+.|.++ ||.++++..+ ..++++||+++.++ +++.+++++|
T Consensus 340 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 386 (391)
T 4dq6_A 340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLACPR--SMLEEALIRI 386 (391)
T ss_dssp HHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 9999999977 9999997663 34689999999643 5577766654
No 50
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-41 Score=336.95 Aligned_cols=323 Identities=20% Similarity=0.235 Sum_probs=260.8
Q ss_pred CCeEEcCCCCCCC--CCCHHHHHHHhc-CCC----CCCCCC-cchHHHHHHHHHHc----C---CCCCCEEEeCCHHHHH
Q 014594 95 EDIVKIDANENPY--GPPPEVREALGQ-LKF----PYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADELI 159 (422)
Q Consensus 95 ~~~i~l~~~~~~~--~~~~~v~~al~~-~~~----~~~y~~-~~~~~lr~~la~~~----~---~~~~~i~~~~G~~~al 159 (422)
+++|+|+.|.++. .+++++.+++.+ +.. ...|+. .+..++|+++++++ | +++++|++|+|+++++
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al 122 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL 122 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence 4689999987543 366788888765 221 256754 47899999999999 8 6678999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CCCeEEE-EeCCCCcc
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIF-LTSPNNPD 231 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~-l~~p~NPt 231 (422)
..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++.+++ .++++|+ +++|+|||
T Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~npt 201 (425)
T 1vp4_A 123 DLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPA 201 (425)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTT
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCC
Confidence 9999999999999999999999999999999999999986544 5899999999874 2789985 67999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~ 304 (422)
|.+++.+++++|++. |+++|+||+|.+|.+++. ....++..+++++++||||.++ +|+|+||+++++++++.
T Consensus 202 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~ 280 (425)
T 1vp4_A 202 GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRK 280 (425)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHH
Confidence 999999887777653 999999999999875432 2333344578999999999999 99999999999999998
Q ss_pred HHHhcCC--CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccC-C---CCcc-cCCCceEEEEEeCCCC
Q 014594 305 LWRAKQP--YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDV-P---FLNP-YPSYSNFILCEVTSGM 373 (422)
Q Consensus 305 l~~~~~~--~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~-~---~~~~-~p~~~~f~~~~~~~~~ 373 (422)
+...... ++.+++.|.++.++|++. ++++ .+++++++++++.+.|+++ + .+.+ .|.+++|+|++++.+.
T Consensus 281 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 360 (425)
T 1vp4_A 281 IVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF 360 (425)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC
T ss_pred HHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC
Confidence 8765543 677999999999999874 4556 8888999999999999874 3 3443 5778899999998666
Q ss_pred CHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhh
Q 014594 374 DAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 374 ~~~~~~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+..++.+.|.++||.++++..+ ..++++||+++.. +.+++.+++++
T Consensus 361 ~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~ 410 (425)
T 1vp4_A 361 DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKR 410 (425)
T ss_dssp CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHH
Confidence 7788999999889999987653 2468999999864 12444444443
No 51
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-41 Score=333.06 Aligned_cols=323 Identities=24% Similarity=0.364 Sum_probs=262.6
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRC 165 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~~ 165 (422)
++|+|+.|++++++++.+.+++.+ +.. ...|+.. +..++|+++++++ | ++++ +|++|+|+++++..++++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~ 105 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG 105 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence 479999999998889999999876 322 3568654 6899999999996 6 4677 999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++.+++++
T Consensus 106 ~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~~~~l~~ 184 (411)
T 2o0r_A 106 LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT-PRTRALIINSPHNPTGAVLSATELAA 184 (411)
T ss_dssp HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc-cCceEEEEeCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999998643 46799999999997 68999999999999999999877766
Q ss_pred HHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY 312 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~ 312 (422)
|++. |+++|+||+|.++.+++. ....+. ..++++++.|+||.+|++|+|+||+++++++++.+..... .+
T Consensus 185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 264 (411)
T 2o0r_A 185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY 264 (411)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence 6553 999999999999875432 122222 2567999999999999999999999999999988876544 57
Q ss_pred CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCCc
Q 014594 313 NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGV 387 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~gI 387 (422)
+.+.+.+.++.++|+. .++++ .+++++++++++.+.|+++++....+..++|+|++++. +.+..++.+.|. ++||
T Consensus 265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi 344 (411)
T 2o0r_A 265 VGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGV 344 (411)
T ss_dssp CCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSE
T ss_pred CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCE
Confidence 7788888888888875 46677 88999999999999998875333345567799999974 257888999887 7899
Q ss_pred EEEeCCCC-C------------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 388 MIRHYNNK-E------------LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 388 ~v~~~~~~-~------------~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.++++..+ . .++++||+++..+ +++.+++++|
T Consensus 345 ~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~--e~i~~~~~~l 389 (411)
T 2o0r_A 345 AAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRD--DTLDEAIRRL 389 (411)
T ss_dssp ECEEGGGGSCCC--------CCGGGCEEEECCSCH--HHHHHHHHHH
T ss_pred EEcChhhhCCCccccccccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 99987542 1 3579999998632 4566555554
No 52
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.5e-40 Score=328.50 Aligned_cols=304 Identities=18% Similarity=0.212 Sum_probs=250.8
Q ss_pred CCeEEcCCCCC-----CCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHc-CC-CCC---CEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANEN-----PYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~~--~~~y~-~~~~~~lr~~la~~~-~~-~~~---~i~~~~G~~~al~~ 161 (422)
.++|+|+.|++ ++++++.+.+++.+... ...|+ ..|..++|+++++++ +. .++ +|++|+|+++++..
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~ 117 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH 117 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH
Confidence 46899999965 88899999999887432 24674 458899999999987 22 256 99999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcC---CCe-EEEEeCC-CCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~ 235 (422)
++++++++||+|+++.|+|..|...++..|++++.++. ++++++|++.+++.+++. +++ ++++++| |||||.++
T Consensus 118 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~ 197 (418)
T 3rq1_A 118 LIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI 197 (418)
T ss_dssp HHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred HHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999996 355799999999998741 566 7888899 99999999
Q ss_pred CHHHHHHHHc---------C-CCeEEEccCCccccCCCchh-hh---hh-cCCc--EEEEccChhhhccccccceeeec-
Q 014594 236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM-EW---VK-KHDN--LIVLRTFSKRAGLAGLRVGYGAF- 297 (422)
Q Consensus 236 ~~e~l~~i~~---------~-~~~li~Deay~~~~~~~~~~-~~---~~-~~~~--~i~~~S~SK~~~~~G~r~G~i~~- 297 (422)
+.+++.+|++ . |+++|+||+|.+|.+++... .. .. ..++ +++++||||.+|++|+|+||+++
T Consensus 198 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~ 277 (418)
T 3rq1_A 198 EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGI 277 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEE
Confidence 9999998876 5 89999999999998754321 11 11 1344 58899999999999999999999
Q ss_pred --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHccCCh----HHH----HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594 298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI----YLE----VKEALIKERERLFKLLKDVPFLNPYPSY 361 (422)
Q Consensus 298 --~~~~~~~l~~~~~------~~~~~~~~~~aa~~~L~~~~----~~~----~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 361 (422)
++++++.+..... ..+++.+++.++..+|++.+ |.+ ++++++++++.+.+.|+++++....+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 357 (418)
T 3rq1_A 278 SDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG 357 (418)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred eCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 9999998876532 24688999999999998863 433 5678889999999999887643445667
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~ 406 (422)
++|+|++++ +..++.+.|.++||.++++. +++||+++
T Consensus 358 ~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~-----~~iRis~~ 394 (418)
T 3rq1_A 358 GFFITIPTD---SANAICEELKKEHIYVIALA-----NGIRIAAC 394 (418)
T ss_dssp SSEEEEECT---THHHHHHHHHHTTEECEECS-----SEEEEEGG
T ss_pred eEEEEcCCC---CHHHHHHHHHhCCEEEecCC-----CCeEEEEe
Confidence 788998874 68899999999999999974 78999987
No 53
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=7.5e-41 Score=329.33 Aligned_cols=323 Identities=22% Similarity=0.333 Sum_probs=260.0
Q ss_pred CCCeEEcCCCCCCCC--CCHHHHHHHhcC-C----CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594 94 PEDIVKIDANENPYG--PPPEVREALGQL-K----FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~--~~~~v~~al~~~-~----~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al 159 (422)
+.++|+|+.+.++.. +++++.+++.+. . ... |+.. +..++|+++++++ | +++++|++|+|+++++
T Consensus 33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~ 111 (407)
T 2zc0_A 33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGAL 111 (407)
T ss_dssp SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHH
T ss_pred CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHH
Confidence 447899998876543 567888877652 1 124 7554 7899999999998 7 5678999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----c-CCCeEEE-EeCCCCccCc
Q 014594 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGS 233 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~ 233 (422)
..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++.++ + .++++|+ +++|+||||.
T Consensus 112 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~ 190 (407)
T 2zc0_A 112 DLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGV 190 (407)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCC
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCc
Confidence 9999999999999999999999999999999999999986544 589999999986 4 3788875 5699999999
Q ss_pred CCCHHHHHHHHc---C-CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594 234 IINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (422)
Q Consensus 234 ~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~ 306 (422)
+++.+++++|++ . |+++|+||+|.++.+++. ....++..+++++++||||.++ +|+|+||+++++++++.+.
T Consensus 191 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~ 269 (407)
T 2zc0_A 191 TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVL 269 (407)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHH
Confidence 999996666554 4 999999999999875432 2233334468999999999999 9999999999999999988
Q ss_pred HhcCC--CCCcHHHHHHHHHHccCC----hHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCCCCHHH
Q 014594 307 RAKQP--YNVSVAAEVAACAALQNP----IYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 307 ~~~~~--~~~~~~~~~aa~~~L~~~----~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~~~~~~ 377 (422)
..... ++.+++.+.++.++|++. ++++ .+++++++++++.+.|++ ++.+.+ .|.+++|+|++++++.+..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (407)
T 2zc0_A 270 MQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGIS 349 (407)
T ss_dssp HHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHH
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHH
Confidence 76655 457899999999999876 4555 888899999999999987 444443 56778999999987778999
Q ss_pred HHHHHHhC-CcEEEeCCCC----CCCCeEEEEecC--hhhHHHHHHHHh
Q 014594 378 LKDDLAKM-GVMIRHYNNK----ELKGYVRVSVGK--PEHTDALMECLM 419 (422)
Q Consensus 378 ~~~~L~~~-gI~v~~~~~~----~~~~~iRis~~~--~~~~~~l~~al~ 419 (422)
+.+.|.++ ||.++++..+ ..++++||+++. .++++++.++|+
T Consensus 350 l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~ 398 (407)
T 2zc0_A 350 FANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLA 398 (407)
T ss_dssp HHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 99999876 9999987653 246899999985 344555554444
No 54
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=3.9e-41 Score=334.16 Aligned_cols=318 Identities=18% Similarity=0.260 Sum_probs=256.3
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C------CCCCCC-CcchHHHHHHHHHHc----CCCCCCEEEeCCHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELIDL 161 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~y~-~~~~~~lr~~la~~~----~~~~~~i~~~~G~~~al~~ 161 (422)
+.++|+|+.|+++++++|.+.+++.+. . ...+|+ ..+..+||+++++++ ++++++|++|+|+++++..
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~ 134 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR 134 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence 467999999999999999999988752 1 124674 457899999999996 7888999999999999998
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCC------------EEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+ ..++++||.|+++.|+|+.+...++..|. +++.++.+. ++..|+++ .+++++|++++|
T Consensus 135 l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p 207 (432)
T 3ei9_A 135 L-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSP 207 (432)
T ss_dssp H-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESS
T ss_pred H-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCC
Confidence 5 66889999999999999999988888774 567777543 34455432 267899999999
Q ss_pred CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
|||||.+++.+++.+|++. |+++|+||+|.+|..++.. +... ...+++++++||||.||++|+|+||++++++
T Consensus 208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK 287 (432)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence 9999999999999998654 9999999999998765322 2222 2346789999999999999999999999988
Q ss_pred H--------HHHHHHhc--CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594 301 I--------IEYLWRAK--QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367 (422)
Q Consensus 301 ~--------~~~l~~~~--~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~ 367 (422)
+ ++.+.+.. ..++.+++++.++.+++.+. +|++ ++++++++++++.+.|+++++....+.+++|+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 367 (432)
T 3ei9_A 288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV 367 (432)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEE
T ss_pred HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEE
Confidence 7 66665443 34568999999999999753 5666 8899999999999999988644444578999999
Q ss_pred EeCCCCCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 368 EVTSGMDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++ +.+..++.+.|+ ++||.++++..+ ..++++||++..++ +++.+++++|
T Consensus 368 ~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~rl 421 (432)
T 3ei9_A 368 HFP-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR--ENILEACRRF 421 (432)
T ss_dssp ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred ECC-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 998 667888888887 569999998763 34789999997643 6688888876
No 55
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.2e-40 Score=327.61 Aligned_cols=324 Identities=15% Similarity=0.230 Sum_probs=262.9
Q ss_pred CCeEEcCCCC-CCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHH----cCCC--C-CCEEEeCCHHHHHHHH
Q 014594 95 EDIVKIDANE-NPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKD----SGLE--S-DHILVGCGADELIDLI 162 (422)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~----~~~~--~-~~i~~~~G~~~al~~~ 162 (422)
.++|+|+.|. ++++++|++++++.+. .. ...| +..+..+++++++++ +|++ + ++|++|+|+++++..+
T Consensus 39 ~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~ 118 (407)
T 3nra_A 39 GRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLA 118 (407)
T ss_dssp SCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 3589999965 5588899999988763 21 1346 344667777776665 4653 4 7999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC------CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR------KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~------~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
+++++++||+|+++.|+|..+...++..|++++.++. ++++.+|++++++.++ .++++|++++|+||||.+++
T Consensus 119 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~ 197 (407)
T 3nra_A 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK-AGARVFLFSNPNNPAGVVYS 197 (407)
T ss_dssp HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH-TTCCEEEEESSCTTTCCCCC
T ss_pred HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh-hCCcEEEEcCCCCCCCcccC
Confidence 9999999999999999999999999999999999997 4678899999999997 58999999999999999999
Q ss_pred HHHHHHHHc---C-CCeEEEccCCccccCCCch---hhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594 237 DEDLLKILE---M-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (422)
Q Consensus 237 ~e~l~~i~~---~-~~~li~Deay~~~~~~~~~---~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~ 307 (422)
.+++++|++ . |+++|+||+|..+.+++.. .... ...++++++.||||.+|++|+|+||+++++++++.+..
T Consensus 198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~ 277 (407)
T 3nra_A 198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK 277 (407)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH
Confidence 777666655 3 9999999999998765422 2222 23678999999999999999999999999999998876
Q ss_pred hcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHH
Q 014594 308 AKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDD 381 (422)
Q Consensus 308 ~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~ 381 (422)
.... ++.+++.+.++.++|++ .++++ .+++++++++++.+.|++++.+.+ .+.+++|+|++++. +.+..++.+.
T Consensus 278 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (407)
T 3nra_A 278 LQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI 357 (407)
T ss_dssp HHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred HHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence 6543 56778889888888875 46777 888999999999999999865554 56667999999986 6788999999
Q ss_pred HH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 382 LA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 382 L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|+ ++||.++++..+ ...+++||+++.. .+++++++++|
T Consensus 358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~i~~~~~~l 398 (407)
T 3nra_A 358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQD--HEAAVAAARRI 398 (407)
T ss_dssp HHHHHCEECEEGGGTCTTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 97 579999987763 3578999999863 35566666554
No 56
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.7e-40 Score=327.52 Aligned_cols=318 Identities=19% Similarity=0.214 Sum_probs=257.4
Q ss_pred CCeEEcCCCCC-----CCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHc-CC-CCC---CEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANEN-----PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~--~~~~y-~~~~~~~lr~~la~~~-~~-~~~---~i~~~~G~~~al~~ 161 (422)
.++|+|+.|++ ++++++.+.+++.+.. ....| +..|..++|+++++++ +. .++ +|++|+|+++++..
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~ 116 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRS 116 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHH
Confidence 47899999986 8888999999987743 22567 4458899999999976 32 245 99999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcC---CCe-EEEEeCC-CCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~ 235 (422)
++++++++||+|+++.|+|..|...++..|++++.++. ++++++|++++++.+++. +++ ++++++| |||||.++
T Consensus 117 ~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~ 196 (413)
T 3t18_A 117 AIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSL 196 (413)
T ss_dssp HHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred HHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999996 455799999999998742 677 7888899 99999999
Q ss_pred CHHHHHHHHc---------C-CCeEEEccCCccccCCCch----hhhhh-cCCc--EEEEccChhhhccccccceeeec-
Q 014594 236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESR----MEWVK-KHDN--LIVLRTFSKRAGLAGLRVGYGAF- 297 (422)
Q Consensus 236 ~~e~l~~i~~---------~-~~~li~Deay~~~~~~~~~----~~~~~-~~~~--~i~~~S~SK~~~~~G~r~G~i~~- 297 (422)
+.+++.+|++ . |+++|+||+|.+|.+.+.. ..... ..++ +++++||||.||++|+|+||+++
T Consensus 197 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~ 276 (413)
T 3t18_A 197 SDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGI 276 (413)
T ss_dssp CHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEe
Confidence 9999998876 5 9999999999999865432 12211 2344 48899999999999999999999
Q ss_pred --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHccCCh---HHH----HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI---YLE----VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 298 --~~~~~~~l~~~~~------~~~~~~~~~~aa~~~L~~~~---~~~----~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
++++++.+..... ..+++.+++.++..+|++.+ |.+ ++++++++++.+.+.|+++++....+.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 356 (413)
T 3t18_A 277 SSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGG 356 (413)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSS
T ss_pred cCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCce
Confidence 9999998876532 24588999999999998764 433 67789999999999999886444456677
Q ss_pred eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh---HHHHHHHHhh
Q 014594 363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH---TDALMECLMH 420 (422)
Q Consensus 363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~---~~~l~~al~~ 420 (422)
+|+|+++. +..++.+.|.++||.++++ ++++||+++...+ .+.|.+++++
T Consensus 357 ~~~~~~~~---~~~~~~~~l~~~gv~v~~g-----~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 357 FFTFIPTD---KAFDIVKDLEKENIFTIPS-----AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp SCEEEECS---CHHHHHHHHHHTTEECEEC-----SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred EEEEeCCC---CHHHHHHHHHhCCEEEecC-----CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 88998773 7889999999999999997 4899999874222 3444455443
No 57
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=6.8e-40 Score=325.57 Aligned_cols=326 Identities=18% Similarity=0.245 Sum_probs=262.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcCCC--C------------CCCCC-cchHHHHHHHHHHcC--------CCCCCEE
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------------YIYPD-PESRRLRAALAKDSG--------LESDHIL 150 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------------~~y~~-~~~~~lr~~la~~~~--------~~~~~i~ 150 (422)
+..+|+|+.+++++. .+.+.+++.+... . .+|++ .|..+||++++++++ +++++|+
T Consensus 37 p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~ 115 (435)
T 3piu_A 37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV 115 (435)
T ss_dssp TTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred CCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEE
Confidence 345899999999997 6777788776311 0 35754 478999999999987 6789999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCCC--CCCCCHHHHHHHhhc-----CCCeEE
Q 014594 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRKS--DFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 151 ~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
+|+|+++++..++++++++||.|+++.|+|..+...+. ..|++++.++.++ ++.+|++++++++++ .++++|
T Consensus 116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 195 (435)
T 3piu_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence 99999999999999999999999999999998887777 6899999999653 567999999999874 378999
Q ss_pred EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc----hhhhhhc---------CCcEEEEccChhhh
Q 014594 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKK---------HDNLIVLRTFSKRA 285 (422)
Q Consensus 223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~---------~~~~i~~~S~SK~~ 285 (422)
++++|+||||.+++.+++++|++. |+++|+||+|..+.+.+. ......+ .++++++.||||.+
T Consensus 196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~ 275 (435)
T 3piu_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence 999999999999999888887654 999999999998665432 1222222 67889999999999
Q ss_pred ccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH----HH-HHHHHHHHHHHHHHHHccCCCCcccC
Q 014594 286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY----LE-VKEALIKERERLFKLLKDVPFLNPYP 359 (422)
Q Consensus 286 ~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~----~~-~~~~~~~~~~~l~~~L~~~~~~~~~p 359 (422)
|++|+|+||+++ ++++.+.+.+....++.+++.+.++.++|++.++ ++ .+++++++++++.+.|+++++....+
T Consensus 276 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 355 (435)
T 3piu_A 276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG 355 (435)
T ss_dssp CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred CCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 999999999999 5778888887777788899999999999988654 34 77889999999999999886433445
Q ss_pred CCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 360 SYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 360 ~~~~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+++|+|++++... +..++.+.|+++ ||.+.++..+ ..++++||+++.. +.+++.+++++|
T Consensus 356 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l 425 (435)
T 3piu_A 356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRL 425 (435)
T ss_dssp CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHH
Confidence 56699999997433 456788888755 9999987652 4578999999763 235555555544
No 58
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=7.8e-40 Score=323.81 Aligned_cols=325 Identities=19% Similarity=0.304 Sum_probs=264.2
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCcchHHHHHHHHHH----cC--CCCCCEEEeCCHHHHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~~~~~lr~~la~~----~~--~~~~~i~~~~G~~~al~~~~~~ 165 (422)
+.++|+|..++++++++|++.+++.+ +. ..+.|+... .+++++++++ ++ +++++|++|+|++++++.++++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~ 138 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN-DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQA 138 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC-HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 57899999999999999999999976 32 235564432 5555555555 56 6788999999999999999999
Q ss_pred hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
++++||+|+++.|+|+.+...++..|.+++.+|.+ .++.+|+++|+++++++++++|++++|+||||.+++.+++++
T Consensus 139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~ 218 (421)
T 3l8a_A 139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK 218 (421)
T ss_dssp HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999853 345689999999997678999999999999999999988888
Q ss_pred HHcC----CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhc---
Q 014594 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK--- 309 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~--- 309 (422)
|++. |+++|+||+|.+|.+.+. ....+. ..++++++.|+||.+|++|+|+||++++ +++.+.+....
T Consensus 219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~ 298 (421)
T 3l8a_A 219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN 298 (421)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence 8764 999999999999886442 222221 2478899999999999999999999998 88888887554
Q ss_pred CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014594 310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-K 384 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~-~ 384 (422)
..++.|++++.++.++|+. .+|++ .+++++++++++.+.|++++.+.+ .+.+++++|++++. +.+.+++.+.|. +
T Consensus 299 ~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~ 378 (421)
T 3l8a_A 299 NQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNE 378 (421)
T ss_dssp TCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHh
Confidence 3457899999999999874 46777 889999999999999988754554 45566677899975 467889999997 5
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+||.+.++..+ ..++++||+++.++ +++++++++|
T Consensus 379 ~gi~v~~g~~f~~~~~~~iRi~~~~~~--~~i~~~l~~l 415 (421)
T 3l8a_A 379 AKVVLNDGAHFGKEGKYFARLNVATPK--NTVQEALSRI 415 (421)
T ss_dssp TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred CCEEEECchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 69999987653 33689999999643 5577777665
No 59
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=1.6e-40 Score=326.48 Aligned_cols=317 Identities=22% Similarity=0.289 Sum_probs=247.5
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHH--cC-CCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKD--SG-LESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~y-~~~~~~~lr~~la~~--~~-~~~~~i~~~~G~~~al~~~ 162 (422)
+.++|+|+.|+++++++|.+.+++.+. . ....| +..+..++|++++++ +| +++++|++|+|++++++.+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~ 111 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL 111 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence 467899999999999999998887652 1 12567 456889999999999 57 7889999999999999997
Q ss_pred HHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+. ++++||+|+++.|+|..+...++..|++ ++.++.++ ++..|+++ . +++++|++++||||||.+++.++
T Consensus 112 ~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~--~~~~~v~l~~p~nptG~~~~~~~ 184 (400)
T 3asa_A 112 LS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D--THIDILCLCSPNNPTGTVLNKDQ 184 (400)
T ss_dssp HH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T--CCCSEEEEESSCTTTCCCCCHHH
T ss_pred HH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c--cCccEEEEeCCCCCCCCcCCHHH
Confidence 65 5689999999999999999988899998 99998653 33444321 1 57899999999999999999988
Q ss_pred HHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHH-------HHH
Q 014594 240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-------IEY 304 (422)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-------~~~ 304 (422)
+++|++. |+++|+||+|.+|.+++. ....++ ..+++++++||||.+|++|+|+||+++++++ ++.
T Consensus 185 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~ 264 (400)
T 3asa_A 185 LRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQ 264 (400)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHH
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHH
Confidence 8877653 999999999998875432 222222 1357899999999999999999999999887 665
Q ss_pred HHHhc--CC-CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEE-eCCCCCHHHHH
Q 014594 305 LWRAK--QP-YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE-VTSGMDAKKLK 379 (422)
Q Consensus 305 l~~~~--~~-~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~-~~~~~~~~~~~ 379 (422)
+.... .. ++.+.+.|.++.++|++. +++ .+++++++++++.+.|++++.....+.+++|+|++ ++.+.+..++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (400)
T 3asa_A 265 DWERFLSTTFNGASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLF 343 (400)
T ss_dssp HHHHHHHHHCCCCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHH
T ss_pred HHHHHhccCccCCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHH
Confidence 54321 22 468999999999999876 555 88899999999999999885322345678999999 87666777888
Q ss_pred HHHH-hCCcEEEeCCCCC--CCCeEEEEec-ChhhHHHHHHHH
Q 014594 380 DDLA-KMGVMIRHYNNKE--LKGYVRVSVG-KPEHTDALMECL 418 (422)
Q Consensus 380 ~~L~-~~gI~v~~~~~~~--~~~~iRis~~-~~~~~~~l~~al 418 (422)
+.|+ ++||.++++..+. .++++||++. +.++++++.+.|
T Consensus 344 ~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l 386 (400)
T 3asa_A 344 DFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERL 386 (400)
T ss_dssp HHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHH
Confidence 8887 5699999886532 4689999954 444444444443
No 60
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.6e-39 Score=321.49 Aligned_cols=315 Identities=18% Similarity=0.197 Sum_probs=248.8
Q ss_pred CCCeEEcCCC---CCCCCCC--HHHHHHHhc-CC--CCCCCC-CcchHHHHHHHHHHcCC------CCC--CEEEeCCHH
Q 014594 94 PEDIVKIDAN---ENPYGPP--PEVREALGQ-LK--FPYIYP-DPESRRLRAALAKDSGL------ESD--HILVGCGAD 156 (422)
Q Consensus 94 ~~~~i~l~~~---~~~~~~~--~~v~~al~~-~~--~~~~y~-~~~~~~lr~~la~~~~~------~~~--~i~~~~G~~ 156 (422)
..++|+|+.| +++..++ +.+.+++.+ +. ..+.|+ ..|..++|+++++++.. +++ +|++|+|++
T Consensus 48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t 127 (420)
T 4f4e_A 48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT 127 (420)
T ss_dssp CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence 3578999999 5555444 899998876 22 235684 45889999999999732 567 899999999
Q ss_pred HHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594 157 ELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (422)
Q Consensus 157 ~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP 230 (422)
+++..++ ..++++||+|+++.|+|..+...++..|++++.++. ++++.+|++.+++.+++ ++++++++++||||
T Consensus 128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP 207 (420)
T 4f4e_A 128 GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP 207 (420)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999994 456899999999999999999999999999999996 45788999999999964 46789999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chh-hhhhcCCcEEEEccChhhhccccccceeeec---C
Q 014594 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P 298 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~ 298 (422)
||.+++.+++++|++. |+++|+||+|.+|.++. ... ......+++++++||||.||++|+|+||+++ +
T Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~ 287 (420)
T 4f4e_A 208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS 287 (420)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence 9999999988888764 99999999999998753 122 2223578999999999999999999999864 5
Q ss_pred HHHHHHH----HHh--cCCCCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccC----CCCcccCC
Q 014594 299 LSIIEYL----WRA--KQPYNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDV----PFLNPYPS 360 (422)
Q Consensus 299 ~~~~~~l----~~~--~~~~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~ 360 (422)
+++++.+ ... ....+.+.+.+.++..+|.+. ++++ ++++++++++.+.+.|+++ ++....|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 367 (420)
T 4f4e_A 288 KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ 367 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC
Confidence 6665543 222 123456788899888888874 3455 8889999999999999987 33234577
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
+++|+|+.+ +.+.+.+.|.++||.+.++. ||+++ +.++++++.++|++
T Consensus 368 ~g~~~~~~~----~~~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~ 417 (420)
T 4f4e_A 368 RGMFSYSGL----TSAQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAA 417 (420)
T ss_dssp CSSEEECCC----CHHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred ccEEEEeCC----CHHHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHH
Confidence 889999776 45667777779999999853 99998 45556666666654
No 61
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.8e-39 Score=315.97 Aligned_cols=305 Identities=22% Similarity=0.296 Sum_probs=250.7
Q ss_pred HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH
Q 014594 111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188 (422)
Q Consensus 111 ~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~ 188 (422)
+++.+++.... ..| +..+..+||+++++++ ++++++|++|+|+++++..++++++++||+|+++.|+|..+...++
T Consensus 46 ~~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~ 123 (375)
T 3op7_A 46 EDFYKKLQGTK--LNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPK 123 (375)
T ss_dssp HHHHHHHHTSC--CSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHhcCC--cCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH
Confidence 34555554422 345 5567899999999998 5788999999999999999999999999999999999999999999
Q ss_pred HcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH---HHcC-CCeEEEccCCccccCC
Q 014594 189 VNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK---ILEM-PILVVLDEAYTEFSGL 262 (422)
Q Consensus 189 ~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~---i~~~-~~~li~Deay~~~~~~ 262 (422)
..|++++.++.+ .++.+|+++++++++ +++++|++++|+||||.+++.+++++ +|+. |+++|+||+|.++...
T Consensus 124 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 124 SLGAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp HTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred HcCCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 999999999854 456689999999997 68999999999999999999555555 5555 9999999999998765
Q ss_pred CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCC-hHHH-HHHHH
Q 014594 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLE-VKEAL 338 (422)
Q Consensus 263 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~ 338 (422)
......+..++++++.||||.+|++|+|+||+++++++++.+..... .++.+.+.+.++..+|++. ++++ .++.+
T Consensus 203 -~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 281 (375)
T 3op7_A 203 -DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHIL 281 (375)
T ss_dssp -CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -CCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHH
Confidence 22222344678899999999999999999999999999999876655 3567889999998888864 4566 78888
Q ss_pred HHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHH
Q 014594 339 IKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 416 (422)
Q Consensus 339 ~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~ 416 (422)
+++++.+.+.|++++.+. ..|.+++++|+.++.+.+..++++.|+ ++||.++++..+..++++||+++... +++.+
T Consensus 282 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~i~~ 359 (375)
T 3op7_A 282 EENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQ--ETLIK 359 (375)
T ss_dssp HHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCH--HHHHH
T ss_pred HHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCH--HHHHH
Confidence 999999999999876555 356777889999887778899998885 89999999887666899999998754 45666
Q ss_pred HHhhh
Q 014594 417 CLMHL 421 (422)
Q Consensus 417 al~~l 421 (422)
++++|
T Consensus 360 ~l~~l 364 (375)
T 3op7_A 360 GLEKL 364 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 62
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.6e-40 Score=326.03 Aligned_cols=322 Identities=15% Similarity=0.164 Sum_probs=255.8
Q ss_pred CeEEcCCCCCCCCC---CHHHHHHH--hc-CC----CCCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHH--HHH
Q 014594 96 DIVKIDANENPYGP---PPEVREAL--GQ-LK----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELI--DLI 162 (422)
Q Consensus 96 ~~i~l~~~~~~~~~---~~~v~~al--~~-~~----~~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al--~~~ 162 (422)
..|+|..|.++... ++.+.+++ .+ +. ....|++ .|..+||+++++++++++++|++|+|+++++ +++
T Consensus 34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 113 (427)
T 3ppl_A 34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI 113 (427)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence 46999999876533 22455655 33 21 2367866 4889999999999999999999999999999 588
Q ss_pred HHHhcC--C----------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCC
Q 014594 163 MRCVLD--P----------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNN 229 (422)
Q Consensus 163 ~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~N 229 (422)
++++++ + ||+|+++.|+|..+...++..|++++.+|.+.+ ++|+++++++++++++++|+++ +|||
T Consensus 114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~N 192 (427)
T 3ppl_A 114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSN 192 (427)
T ss_dssp HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCT
T ss_pred HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCC
Confidence 888877 6 899999999999999999999999999997554 5999999999965789999877 8899
Q ss_pred ccCcCCCHHHHHHHH----cC-CCeEEEccCCccccCCCc---hhhhh------hcCCcEEEEccChhhhccccccceee
Q 014594 230 PDGSIINDEDLLKIL----EM-PILVVLDEAYTEFSGLES---RMEWV------KKHDNLIVLRTFSKRAGLAGLRVGYG 295 (422)
Q Consensus 230 PtG~~~~~e~l~~i~----~~-~~~li~Deay~~~~~~~~---~~~~~------~~~~~~i~~~S~SK~~~~~G~r~G~i 295 (422)
|||.+++.+++++|+ +. |+++|+||+|.++.+.+. ..... +..+++++++||||. +++|+|+||+
T Consensus 193 PtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~ 271 (427)
T 3ppl_A 193 PTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFF 271 (427)
T ss_dssp TTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEE
T ss_pred CCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEE
Confidence 999999999666654 44 999999999998654321 11111 256889999999998 7799999999
Q ss_pred ecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-C---hHHH-HHHHHHHHHHHHHHHHcc----CCCCc-ccCCCce
Q 014594 296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-P---IYLE-VKEALIKERERLFKLLKD----VPFLN-PYPSYSN 363 (422)
Q Consensus 296 ~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~---~~~~-~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~ 363 (422)
++++++++.+..... .++.+.+.|.++..+|++ + ++++ .++.++++++.+.+.|.+ ++.+. ..|++++
T Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~ 351 (427)
T 3ppl_A 272 LTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGY 351 (427)
T ss_dssp ECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSS
T ss_pred EcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccE
Confidence 999999998877654 478899999999999998 3 3444 777888888888877754 33344 4678899
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|+|+++++. +.+++.+.|.++||.+++++. + ..++++||+++.. +.+++.+++++|
T Consensus 352 ~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l 413 (427)
T 3ppl_A 352 FISLDVVPG-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGV 413 (427)
T ss_dssp CEEEECSTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred EEEEECCcc-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHH
Confidence 999999854 788999999999999999443 2 2578999999874 235666666654
No 63
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=4.9e-39 Score=315.25 Aligned_cols=316 Identities=16% Similarity=0.136 Sum_probs=248.1
Q ss_pred CCCCeEEcCCC---CCCCCCC--HHHHHHHhc-C-C--CCCCCCC-cchHHHHHHHHHHcCC------CCC--CEEEeCC
Q 014594 93 KPEDIVKIDAN---ENPYGPP--PEVREALGQ-L-K--FPYIYPD-PESRRLRAALAKDSGL------ESD--HILVGCG 154 (422)
Q Consensus 93 ~~~~~i~l~~~---~~~~~~~--~~v~~al~~-~-~--~~~~y~~-~~~~~lr~~la~~~~~------~~~--~i~~~~G 154 (422)
...++|+|+.| +++..++ +.+.+++.+ . . ....|+. .|..++|++++++++. +++ +|++|+|
T Consensus 24 ~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g 103 (397)
T 3fsl_A 24 PRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG 103 (397)
T ss_dssp CCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence 34578999999 4444444 899988876 3 2 2356855 5889999999999842 678 8999999
Q ss_pred HHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCC
Q 014594 155 ADELIDLIMR--CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPN 228 (422)
Q Consensus 155 ~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~ 228 (422)
++++++.+++ .++++||+|+++.|+|..+...++..|++++.++. ++++.+|++++++.+++ ++++++++++||
T Consensus 104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~ 183 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCH 183 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSC
T ss_pred cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9999999954 56799999999999999999999999999999997 46788999999999974 467888889999
Q ss_pred CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--h-hhhhhcCCcEEEEccChhhhccccccceeeec--
Q 014594 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--R-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-- 297 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-- 297 (422)
||||.+++.+++++|++. |+++|+||+|.+|.++. . . .......+++++++||||.+|++|+|+||+++
T Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~ 263 (397)
T 3fsl_A 184 NPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMC 263 (397)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred CCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEec
Confidence 999999999988877663 99999999999998652 1 1 22224578999999999999999999999974
Q ss_pred -CHHHHHHHHHh-----cCC-CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-cc
Q 014594 298 -PLSIIEYLWRA-----KQP-YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PY 358 (422)
Q Consensus 298 -~~~~~~~l~~~-----~~~-~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~ 358 (422)
++++++.+... ... .+.+.+++.++..++.+. ++++ .+++++++++++.+.|++++ .+. ..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 343 (397)
T 3fsl_A 264 EDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLL 343 (397)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeec
Confidence 56666544322 123 455788999898888873 4555 88899999999999998863 233 45
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH 420 (422)
Q Consensus 359 p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~ 420 (422)
|.+++|+|+++ +.+.+.+.|.++||.+++++ ||+++. .++++++.++|++
T Consensus 344 ~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~ 395 (397)
T 3fsl_A 344 NQRGMFSYTGL----SAAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAA 395 (397)
T ss_dssp HCCSSEEECCC----CHHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred CCceEEEecCC----CHHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHh
Confidence 67889999876 35667777779999999864 999874 4445555555554
No 64
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.8e-39 Score=321.27 Aligned_cols=322 Identities=15% Similarity=0.158 Sum_probs=255.0
Q ss_pred CeEEcCCCCCC---CCCCHHHHHHHh--cC-CC---CCCC-CC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH--HH
Q 014594 96 DIVKIDANENP---YGPPPEVREALG--QL-KF---PYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELID--LI 162 (422)
Q Consensus 96 ~~i~l~~~~~~---~~~~~~v~~al~--~~-~~---~~~y-~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~--~~ 162 (422)
..|+|+.|.++ ++.++.+.+++. +. .. ...| +. .|..+||+++++++++++++|++|+|+++++. ++
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL 105 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence 35999999988 777788888875 32 21 2568 44 47899999999999999999999999999998 88
Q ss_pred HHHhcC--C---------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEe-CCCC
Q 014594 163 MRCVLD--P---------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNN 229 (422)
Q Consensus 163 ~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~N 229 (422)
++++++ + ||+|+++.|+|..+...++..|++++.++.+.+ ++|+++++++++ .+++++|+++ +|||
T Consensus 106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~N 184 (423)
T 3ez1_A 106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSN 184 (423)
T ss_dssp HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCT
T ss_pred HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCC
Confidence 888888 8 599999999999999999999999999997554 699999999995 4689999865 8999
Q ss_pred ccCcCCCHHHHHHHHc----C-CCeEEEccCCccccCCC-------chhhh---hhcCCcEEEEccChhhhcccccccee
Q 014594 230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLE-------SRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~----~-~~~li~Deay~~~~~~~-------~~~~~---~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
|||.+++.+++++|++ . |+++|+||+|.++.+.. +.... .+..+++++++||||. +++|+|+||
T Consensus 185 PtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~ 263 (423)
T 3ez1_A 185 PGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGF 263 (423)
T ss_dssp TTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEE
T ss_pred CCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEE
Confidence 9999999997777654 3 99999999999643221 11111 1356889999999998 679999999
Q ss_pred eecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC--C---hHHH-HHHHHHHHHHHHHHHHcc----CC-CCc-ccCC
Q 014594 295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN--P---IYLE-VKEALIKERERLFKLLKD----VP-FLN-PYPS 360 (422)
Q Consensus 295 i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~--~---~~~~-~~~~~~~~~~~l~~~L~~----~~-~~~-~~p~ 360 (422)
+++++++++.+..... .++.+.+.|.++.++|++ + ++++ .++.++++++.+.+.|.+ ++ .+. ..|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~ 343 (423)
T 3ez1_A 264 VASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK 343 (423)
T ss_dssp EEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS
T ss_pred EEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC
Confidence 9999999999877653 477899999999999987 4 3444 666777777777666644 54 233 4578
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC-CC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN-NK-----ELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~-~~-----~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+++|+|+++++. +.+.+.+.|.++||.+++++ .+ ..++++||+++.. +.+++.+++++|
T Consensus 344 ~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l 408 (423)
T 3ez1_A 344 GGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVV 408 (423)
T ss_dssp BSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred ccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence 899999999855 78889999999999999943 32 2468999999853 235566665554
No 65
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=5.6e-40 Score=321.72 Aligned_cols=305 Identities=22% Similarity=0.262 Sum_probs=238.2
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC---C---CCCCCCCc-ch-----HHHHHHHHHHcC-----CCC-CCEEEeCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL---K---FPYIYPDP-ES-----RRLRAALAKDSG-----LES-DHILVGCG 154 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~---~---~~~~y~~~-~~-----~~lr~~la~~~~-----~~~-~~i~~~~G 154 (422)
.+.++|+|+.|++++++++.+.+++.+. . ....|++. |. .+||++++++++ +++ ++|++|+|
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G 99 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG 99 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence 3467899999999987777777776331 1 22568654 66 999999999986 234 69999999
Q ss_pred HHHHHHHHHHHhcCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 155 ADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 155 ~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
+++++.+++++++++|| +|+++.|+|..|...++..|++++.++.+.+ +++ .+++|+|++++||||
T Consensus 100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~k~v~l~~p~NP 169 (391)
T 3bwn_A 100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD---------KKGPYIELVTSPNNP 169 (391)
T ss_dssp HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC---------CCSCEEEEEESSCTT
T ss_pred hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC---------CCCCEEEEECCCCCC
Confidence 99999999999999999 9999999999999999999999988885432 222 257899999999999
Q ss_pred cCcCCCHHHHHHHHcC--C--CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHH
Q 014594 231 DGSIINDEDLLKILEM--P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL 305 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~--~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l 305 (422)
||.+++ + |++. + +++|+||+|.+ .....+. ...+++++++||||.||++|+|+||+++ ++++++.+
T Consensus 170 tG~~~~--~---l~~~~~~~~~~ii~De~y~~--~~~~~l~--~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l 240 (391)
T 3bwn_A 170 DGTIRE--T---VVNRPDDDEAKVIHDFAYYW--PHYTPIT--RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKM 240 (391)
T ss_dssp TCCCCC--C---CC-----CCCEEEEECTTCS--TTTSCCC--CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHH
T ss_pred CchhHH--H---HHHHhhcCCCEEEEeCCCCC--CCCCccc--cCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHH
Confidence 999997 3 4433 4 99999999984 1111111 1457889999999999999999999997 89999988
Q ss_pred HHhcC--CCCCcHHHHHHHHHHccC-----------ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-------------
Q 014594 306 WRAKQ--PYNVSVAAEVAACAALQN-----------PIYLE-VKEALIKERERLFKLLKDVPFLNPY------------- 358 (422)
Q Consensus 306 ~~~~~--~~~~~~~~~~aa~~~L~~-----------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~------------- 358 (422)
..... .++++.+.|.++..+|++ ..|++ +++.++++++.+.+.|++++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~ 320 (391)
T 3bwn_A 241 VEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKS 320 (391)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEE
T ss_pred HHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc
Confidence 87665 478899999999999985 45677 8999999999999999987544332
Q ss_pred -CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014594 359 -PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 359 -p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.+|+|+|+++++ .+.+.+.|.++||.+++|..++. ++++|||++.++ +++.+++++|
T Consensus 321 ~~~~g~~~~~~~~~---~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~--e~i~~~~~~L 380 (391)
T 3bwn_A 321 LESYPAFAWLGTKE---ETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSRE--DVFNVFLERL 380 (391)
T ss_dssp ECCCCSEEEEEESS---SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred CCCcceEEEecCCc---HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 3455689999973 23566677799999999887543 689999998743 4455555543
No 66
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.9e-38 Score=311.02 Aligned_cols=314 Identities=15% Similarity=0.171 Sum_probs=246.5
Q ss_pred CCeEEcCCCC---CC--CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHc---C---CCCCCEEE--eCCHHH
Q 014594 95 EDIVKIDANE---NP--YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHILV--GCGADE 157 (422)
Q Consensus 95 ~~~i~l~~~~---~~--~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~---~---~~~~~i~~--~~G~~~ 157 (422)
.++|+|+.|+ +. .++++.+.+++.+. . ..+.| +..+..++|+++++++ + +++++|++ |+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~ 105 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG 105 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence 5689999998 22 25678999888763 1 33567 5668899999999998 3 34789998 999999
Q ss_pred HHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcC--CCeEEEEeCCCCcc
Q 014594 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPD 231 (422)
Q Consensus 158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPt 231 (422)
+++.+++.+ +++||+|+++.|+|+.+...++..|++++.++.+ +++.+|++++++.+++. +++++++++|||||
T Consensus 106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~npt 185 (396)
T 2q7w_A 106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT 185 (396)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999999765 4699999999999999999999999999999964 56789999999998642 46788889999999
Q ss_pred CcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--hhhhh-hcCCcEEEEccChhhhccccccceeeec---CH
Q 014594 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL 299 (422)
Q Consensus 232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~ 299 (422)
|.+++.+++++|++. |+++|+||+|.+|.+++ . ....+ ...+++++++||||.+|++|+|+||+++ ++
T Consensus 186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 265 (396)
T 2q7w_A 186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS 265 (396)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence 999999988887764 99999999999988653 1 22222 2357899999999999999999999997 55
Q ss_pred ----HHHHHHHHh-cCCC-CCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-ccCCC
Q 014594 300 ----SIIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PYPSY 361 (422)
Q Consensus 300 ----~~~~~l~~~-~~~~-~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~ 361 (422)
++++.+... ...+ +.+.+++.++.++|++. ++++ .+++++++++++.+.|++++ .+. ..|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 345 (396)
T 2q7w_A 266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN 345 (396)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred HHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC
Confidence 455555442 2344 45899999999999875 4566 77889999999999999886 233 35677
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
++|+|++++ .+.+.+.|.++||.++++ +||+++ +.++++++.++|++
T Consensus 346 ~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~ 394 (396)
T 2q7w_A 346 GMFSFSGLT----KEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVA 394 (396)
T ss_dssp SSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred ceEEEecCC----HHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHh
Confidence 888888763 456666677899999874 599998 66667777776654
No 67
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=3.5e-42 Score=337.41 Aligned_cols=323 Identities=18% Similarity=0.260 Sum_probs=263.8
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
++++|+.+++++++++++.+++.+. . ....|++. ..++|+++++++ | +++++|++|+|+++++..++++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 110 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT 110 (392)
Confidence 7899999999999999999998873 2 23567665 788999999876 4 567899999999999999999999
Q ss_pred CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-C--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
++||+|+++.|+|+.+...++..|++++.++.+ . +|.+|++++++.+++.++++|++++|+||||.+++.+++++|+
T Consensus 111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~ 190 (392)
T 3b1d_A 111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG 190 (392)
Confidence 999999999999999998888899999998863 2 3569999999998756789999999999999999977777776
Q ss_pred cC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC--
Q 014594 245 EM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-- 312 (422)
Q Consensus 245 ~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~-- 312 (422)
+. |+++|+||+|.+|.+.+. ....+.. .+++++++||||.+|++|+|+||+++++ ++++.+......+
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 270 (392)
T 3b1d_A 191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNH 270 (392)
Confidence 64 899999999999876432 1222222 5788999999999999999999999975 5888887776655
Q ss_pred -CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHH-hC
Q 014594 313 -NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KM 385 (422)
Q Consensus 313 -~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~-~~ 385 (422)
+.+++.+.++.++|++ .++++ .+++++++++.+.+.|++ ++.+.+. +.+++++|++++. +.+..++.+.|. ++
T Consensus 271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~ 350 (392)
T 3b1d_A 271 HEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQA 350 (392)
Confidence 4688899999899886 46777 888999999999999987 6545544 4555667899874 356788999996 88
Q ss_pred CcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 386 GVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 386 gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
||.++++..+. .++++||+++.++ +++++++++|
T Consensus 351 gi~v~~g~~f~~~~~~~iRi~~~~~~--e~i~~~l~~l 386 (392)
T 3b1d_A 351 KVILNRGSDYGSEGELHARLNIAAPK--SLVEEICKRI 386 (392)
Confidence 99999987643 4679999998753 5687777765
No 68
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.3e-38 Score=312.00 Aligned_cols=314 Identities=17% Similarity=0.171 Sum_probs=245.4
Q ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHc-CCC-----CCCEE--EeCCHHHHHHH
Q 014594 94 PEDIVKIDANEN-PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHIL--VGCGADELIDL 161 (422)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~~--~~~~y-~~~~~~~lr~~la~~~-~~~-----~~~i~--~~~G~~~al~~ 161 (422)
..++|+|+.|++ ++..++.+.+++.+.. ....| +..|..+||+++++++ +.. +++|. .+.|+++++..
T Consensus 40 ~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~ 119 (409)
T 4eu1_A 40 AKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRI 119 (409)
T ss_dssp CSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHH
T ss_pred CcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHH
Confidence 457899999996 7777777778877642 23567 5568899999999986 655 67884 59999999987
Q ss_pred HH---HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594 162 IM---RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 162 ~~---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (422)
+. +.++++||+|+++.|+|..+...++..|++++.++. ++++++|++++++.+++ .+++++++++||||||.+
T Consensus 120 ~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~ 199 (409)
T 4eu1_A 120 GGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD 199 (409)
T ss_dssp HHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC
Confidence 64 455789999999999999999999999999999996 46688999999999963 356677779999999999
Q ss_pred CCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hh-hhhhcCCcEEEEccChhhhccccccceee---ecCHH-
Q 014594 235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-----RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYG---AFPLS- 300 (422)
Q Consensus 235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i---~~~~~- 300 (422)
++.+++++|++. |+++|+||+|.+|.+++. .. ...+..+++++++||||.||++|+|+||+ +.+++
T Consensus 200 ~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~ 279 (409)
T 4eu1_A 200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE 279 (409)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH
T ss_pred CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH
Confidence 999997777653 999999999999987541 22 22245678899999999999999999996 56777
Q ss_pred ---HHHHHHHhcC--CCCCcHHHHHHHHHHccCCh----H---HH-HHHHHHHHHHHHHHHHccCCC---Cc-ccCCCce
Q 014594 301 ---IIEYLWRAKQ--PYNVSVAAEVAACAALQNPI----Y---LE-VKEALIKERERLFKLLKDVPF---LN-PYPSYSN 363 (422)
Q Consensus 301 ---~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~~~ 363 (422)
+++.+..... .++.+.+.|.++..+|++.. | ++ .+++++++++++.+.|++++. +. ..|.+++
T Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 359 (409)
T 4eu1_A 280 AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGM 359 (409)
T ss_dssp HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceE
Confidence 6666655432 35677899999999998742 3 44 788999999999999998862 33 3567788
Q ss_pred EEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 364 FILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
|+|+.++ . ++...|+ ++||.+.++. ||+++ +.++++++.++|++
T Consensus 360 ~~~~~~~----~-~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~ 406 (409)
T 4eu1_A 360 MAYTGLT----R-EQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHN 406 (409)
T ss_dssp EEECCCC----H-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred EEEeCCC----H-HHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHH
Confidence 8886553 3 4455555 7899999863 88876 45667777777765
No 69
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.6e-38 Score=312.27 Aligned_cols=326 Identities=14% Similarity=0.157 Sum_probs=246.0
Q ss_pred hHHHHHHhCCC-CCCeEEcCCCCC-CCCC----CHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHcCC------CC
Q 014594 83 FEVLSIQLGRK-PEDIVKIDANEN-PYGP----PPEVREALGQL---KFPYIYPD-PESRRLRAALAKDSGL------ES 146 (422)
Q Consensus 83 ~~~~~~~~~~~-~~~~i~l~~~~~-~~~~----~~~v~~al~~~---~~~~~y~~-~~~~~lr~~la~~~~~------~~ 146 (422)
+..+...+... .+++|+|+.|++ ++.. .+.+.+++.+. .....|+. .|..++|++++++++. ++
T Consensus 15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 94 (401)
T 7aat_A 15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS 94 (401)
T ss_dssp HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence 33444444332 245899999986 4432 24677776653 13467854 5889999999999853 38
Q ss_pred CCEEE--eCCHHHHHHHHHHHhc---CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--C
Q 014594 147 DHILV--GCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER--E 217 (422)
Q Consensus 147 ~~i~~--~~G~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~ 217 (422)
++|++ |+|+++++.++++.+. ++||+|+++.|+|..+...++..|++++.++.+ +++++|++.+++.+.+ +
T Consensus 95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 174 (401)
T 7aat_A 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPE 174 (401)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCT
T ss_pred CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCC
Confidence 89977 9999999999887664 899999999999999999999999999999953 4678999988877753 5
Q ss_pred CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---h--h-hhhhcCCcEEEEccChhhhcc
Q 014594 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R--M-EWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~--~-~~~~~~~~~i~~~S~SK~~~~ 287 (422)
+++++++++||||||.+++.+++++|++. |+++|+||+|.+|.+++. . . ......+++++++||||.||+
T Consensus 175 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 254 (401)
T 7aat_A 175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL 254 (401)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccc
Confidence 78899999999999999999999888764 999999999999986542 1 1 122456889999999999999
Q ss_pred ccccceeeec---CHH----HHHHHHHhcCC--CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHc
Q 014594 288 AGLRVGYGAF---PLS----IIEYLWRAKQP--YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLK 350 (422)
Q Consensus 288 ~G~r~G~i~~---~~~----~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~ 350 (422)
+|+|+||+++ +++ +.+.+...... .+.+...+.++..+++++ ++++ .+++++++++++.+.|+
T Consensus 255 ~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 255 YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999886 666 44444443332 456677888888888764 2344 78899999999999999
Q ss_pred cCC---CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 351 DVP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 351 ~~~---~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
+++ .+. ..|.+++|+|+.+ +.+.+...+.++||.+.++ +||+++ +.++++++.++|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~ 398 (401)
T 7aat_A 335 KEGSSHNWQHITDQIGMFCFTGL----KPEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQ 398 (401)
T ss_dssp HTTCCSCCHHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred hcCCCCCCceecCCcceEEecCC----CHHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHH
Confidence 874 233 3567788888766 3555544445889999764 599997 34557777777664
No 70
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=4e-38 Score=308.50 Aligned_cols=316 Identities=15% Similarity=0.162 Sum_probs=249.6
Q ss_pred CCCeEEcCCCCC-----CCCCCHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHc-CC--CCCCEEE--eCCHHHHH
Q 014594 94 PEDIVKIDANEN-----PYGPPPEVREALGQL---KFPYIYPD-PESRRLRAALAKDS-GL--ESDHILV--GCGADELI 159 (422)
Q Consensus 94 ~~~~i~l~~~~~-----~~~~~~~v~~al~~~---~~~~~y~~-~~~~~lr~~la~~~-~~--~~~~i~~--~~G~~~al 159 (422)
+.++|+|+.|+. +.++++.+.+++.+. ...+.|+. .+..++|+++++++ +. ++++|++ |+|+++++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~ 104 (394)
T 2ay1_A 25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGAL 104 (394)
T ss_dssp CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHH
T ss_pred CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHH
Confidence 456899999983 135678999888763 13467854 57899999999997 55 6889999 99999999
Q ss_pred HHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCc
Q 014594 160 DLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS 233 (422)
Q Consensus 160 ~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~ 233 (422)
+.+++.+.. +||+|+++.|+|+.+...++..|++++.++.+ +++.+|++++++.+++. +++++++++||||||.
T Consensus 105 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 105 RQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 999987754 99999999999999999999999999999964 56789999999998743 3667777999999999
Q ss_pred CCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--hhhhh-hcCCcEEEEccChhhhccccccceeeec---CHHH
Q 014594 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSI 301 (422)
Q Consensus 234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~~~ 301 (422)
+++.+++++|++. |+++|+||+|.+|.+++ . ....+ ...+++++++||||.+|++|+|+||+++ ++++
T Consensus 185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~ 264 (394)
T 2ay1_A 185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT 264 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence 9999988777664 99999999999988642 1 22222 2356899999999999999999999998 6765
Q ss_pred HHHH----HHh-cCCC-CCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-ccCCCce
Q 014594 302 IEYL----WRA-KQPY-NVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PYPSYSN 363 (422)
Q Consensus 302 ~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~ 363 (422)
++.+ ... ...+ +.+++++.++.++|++. ++.+ ++++++++++++.+.|++++ .+. ..|.+++
T Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 344 (394)
T 2ay1_A 265 RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGM 344 (394)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSS
T ss_pred HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceE
Confidence 4443 221 2344 45888999999999875 4566 88899999999999998865 233 3456789
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 421 (422)
|+|++++ .+.+.+.|.++||.++++ +||+++ +.++++++.++++++
T Consensus 345 ~~~~~~~----~~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 345 FSRLGAT----PEQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp EEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred EEeeCCC----HHHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence 9998774 456666777999999874 599998 677778888877654
No 71
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.1e-37 Score=307.31 Aligned_cols=316 Identities=14% Similarity=0.176 Sum_probs=250.2
Q ss_pred CCCCeEEcCCCCC--C---CCCCHHHHHHHhcCC----CCCCC-CCcchHHHHHHHHHHc-CC-----CCCCEEE--eCC
Q 014594 93 KPEDIVKIDANEN--P---YGPPPEVREALGQLK----FPYIY-PDPESRRLRAALAKDS-GL-----ESDHILV--GCG 154 (422)
Q Consensus 93 ~~~~~i~l~~~~~--~---~~~~~~v~~al~~~~----~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~i~~--~~G 154 (422)
.+.++|+|+.|.+ + ..+++.+.+++.+.. ..+.| +..+..++|+++++++ +. ++++|++ |+|
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g 107 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 107 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence 3467899999984 2 345688998887632 33568 6668899999999998 53 6789999 999
Q ss_pred HHHHHHHHHH--HhcCCC-----CEEEEcCCCchhHHHHHHHcCCE-EEEecC--CCCCCCCHHHHHHHhhc--CCCeEE
Q 014594 155 ADELIDLIMR--CVLDPG-----DKIVDCPPTFTMYEFDAAVNGAA-VVKVPR--KSDFSLNVELIADAVER--EKPKCI 222 (422)
Q Consensus 155 ~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i 222 (422)
++++++++++ .++++| |+|+++.|+|+.+...++..|++ ++.++. ++++.+|++++++.+.+ .+++++
T Consensus 108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 187 (412)
T 1ajs_A 108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFV 187 (412)
T ss_dssp HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEE
T ss_pred cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEE
Confidence 9999999965 456899 99999999999999999999999 999986 36678999999999874 367788
Q ss_pred EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCCcEEEEccChhhhccccccc
Q 014594 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRV 292 (422)
Q Consensus 223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~ 292 (422)
++++||||||.+++.+++++|++. |+++|+||+|.+|.+++ . ....+ ...++++++.||||.+|++|+|+
T Consensus 188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 267 (412)
T 1ajs_A 188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV 267 (412)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence 889999999999999988877764 99999999999998653 2 22222 24678999999999999889999
Q ss_pred eeeec---CHH----HHHHHHH-hcCCCC-CcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHHHHHHHccCC--
Q 014594 293 GYGAF---PLS----IIEYLWR-AKQPYN-VSVAAEVAACAALQNPI-------YLE-VKEALIKERERLFKLLKDVP-- 353 (422)
Q Consensus 293 G~i~~---~~~----~~~~l~~-~~~~~~-~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~l~~~L~~~~-- 353 (422)
||+++ +++ +++.+.. ....++ .+.+++.++.++|++.+ +++ .+++++++++++.+.|++++
T Consensus 268 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 347 (412)
T 1ajs_A 268 GNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 347 (412)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999 887 4454554 334454 58899999999998753 556 88899999999999999876
Q ss_pred -CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594 354 -FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 420 (422)
Q Consensus 354 -~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 420 (422)
.+. ..|.+++|+|+.++ .+.+.+.|.++||.++++ +||+++ +.++++++.++|++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~ 406 (412)
T 1ajs_A 348 GTWNHITDQIGMFSFTGLN----PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHE 406 (412)
T ss_dssp SCCHHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHH
T ss_pred CCeeEEcCCCceEEEeCCC----HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHH
Confidence 233 35678899997663 445555566899999874 599998 55666666665543
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.6e-38 Score=312.45 Aligned_cols=329 Identities=15% Similarity=0.165 Sum_probs=251.0
Q ss_pred CCCchHHHHHHhCCCCC-CeEEcCCCCC-CCC----CCHHHHHHHhcC-----CCCCCC-CCcchHHHHHHHHHHc-CCC
Q 014594 79 PILPFEVLSIQLGRKPE-DIVKIDANEN-PYG----PPPEVREALGQL-----KFPYIY-PDPESRRLRAALAKDS-GLE 145 (422)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~i~l~~~~~-~~~----~~~~v~~al~~~-----~~~~~y-~~~~~~~lr~~la~~~-~~~ 145 (422)
+.+++..+..++...+. ++|+|+.|.. ++. ..+.+.+++.++ .....| +..|..++|+++++++ |.+
T Consensus 32 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~ 111 (448)
T 3meb_A 32 PPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKD 111 (448)
T ss_dssp CCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTT
T ss_pred CCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCC
Confidence 34445555555554433 4799999986 543 346777774332 233567 4468999999999997 876
Q ss_pred -----CCCEEE--eCCHHHHHHH--HHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecC-CC--CCCCCHHH
Q 014594 146 -----SDHILV--GCGADELIDL--IMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPR-KS--DFSLNVEL 209 (422)
Q Consensus 146 -----~~~i~~--~~G~~~al~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~-~~--~~~~d~~~ 209 (422)
+++|++ |+|+++++++ .+..++.+||+|+++.|+|..+...++ ..|++++.++. +. ++.+|+++
T Consensus 112 ~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~ 191 (448)
T 3meb_A 112 SKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSN 191 (448)
T ss_dssp CHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHH
T ss_pred ccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHH
Confidence 689999 9999999988 455678899999999999999999999 89999999996 44 48999999
Q ss_pred HHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hhh-hhhcCCcEEE
Q 014594 210 IADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIV 277 (422)
Q Consensus 210 l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~ 277 (422)
+++.+++ .+++++++++||||||.+++.+++++|++. |+++|+||+|.+|.+++. ... .....+++++
T Consensus 192 l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 271 (448)
T 3meb_A 192 TKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLV 271 (448)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEE
T ss_pred HHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEE
Confidence 9999975 457788889999999999999998777664 999999999999986541 122 2245678999
Q ss_pred EccChhhhccccccceee--ec--------C-H----HHHHHHHHhc-C-CCCCcHHHHHHHHHHccCCh----H---HH
Q 014594 278 LRTFSKRAGLAGLRVGYG--AF--------P-L----SIIEYLWRAK-Q-PYNVSVAAEVAACAALQNPI----Y---LE 333 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i--~~--------~-~----~~~~~l~~~~-~-~~~~~~~~~~aa~~~L~~~~----~---~~ 333 (422)
++||||.||++|+|+||+ ++ + + ++++.+.... . ..+++.+++.++..+|.+.+ | ++
T Consensus 272 ~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 351 (448)
T 3meb_A 272 AQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVK 351 (448)
T ss_dssp EEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred EecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 999999999999999998 65 3 4 5666665533 2 24678899999999998852 3 45
Q ss_pred -HHHHHHHHHHHHHHHHccC--CC------C-cccCCCceEEEEEeCCCCCHHHHHHHH-HhCCcEEEeCCCCCCCCeEE
Q 014594 334 -VKEALIKERERLFKLLKDV--PF------L-NPYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMIRHYNNKELKGYVR 402 (422)
Q Consensus 334 -~~~~~~~~~~~l~~~L~~~--~~------~-~~~p~~~~f~~~~~~~~~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iR 402 (422)
++++++++++++.+.|+++ +. . ...|..++|+|+.++ . ++...| .++||.+.+|. .|
T Consensus 352 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~~ll~~~gV~v~~G~-------gR 419 (448)
T 3meb_A 352 EMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT----P-EHVDYLKEKWSIYLVKAG-------GR 419 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC----H-HHHHHHHHHHCEEECSGG-------GE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC----H-HHHHHHHHhCCEEEeCCC-------cE
Confidence 7889999999999999887 22 2 345778899997763 3 455555 58899999875 29
Q ss_pred EEecC--hhhHHHHHHHHh
Q 014594 403 VSVGK--PEHTDALMECLM 419 (422)
Q Consensus 403 is~~~--~~~~~~l~~al~ 419 (422)
||++. .++++++.++|+
T Consensus 420 is~a~~~~~~i~~~~~~l~ 438 (448)
T 3meb_A 420 MSMCGLTESNCDYVAEAIH 438 (448)
T ss_dssp EEGGGCCTTTHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHH
Confidence 99974 444555555544
No 73
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.6e-38 Score=313.61 Aligned_cols=321 Identities=17% Similarity=0.185 Sum_probs=243.1
Q ss_pred CCeEEcCCCCCCCCCC--HHHHHHHhcC-CC------CCCCCC-cchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594 95 EDIVKIDANENPYGPP--PEVREALGQL-KF------PYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADEL 158 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~~------~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a 158 (422)
.++|+|+.+.++..++ +.+.+++.+. .. ...|+. .|..+||+++++++ ++++++|++|+|++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a 110 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA 110 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence 5689999998877433 4556666542 11 136754 47899999999997 5788999999999999
Q ss_pred HHHHHHHhcCCCC-----EEEEc-CCCchhHHHHHHH------cCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 159 IDLIMRCVLDPGD-----KIVDC-PPTFTMYEFDAAV------NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 159 l~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~------~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+++++++++++|| +|+++ .|+|+.+...+.. .+..+..++.+ .++.+|+++++ +. +++++++++
T Consensus 111 l~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~ 187 (417)
T 3g7q_A 111 FFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVS 187 (417)
T ss_dssp HHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEE
T ss_pred HHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-cCceEEEEC
Confidence 9999999999987 89997 9999988766532 23455556543 24678999988 54 689999999
Q ss_pred CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (422)
Q Consensus 226 ~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~ 300 (422)
+||||||.+++.+++++|++. |+++|+||+|..+........ .....++++++.|||| ++++|+|+||++++++
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~ 266 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDK 266 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHH
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHH
Confidence 999999999998777777653 999999999986432111111 1123578999999999 6889999999999999
Q ss_pred HHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHcc-CCC--Cc-ccCCCceEEEEEe
Q 014594 301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKD-VPF--LN-PYPSYSNFILCEV 369 (422)
Q Consensus 301 ~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~-~~~--~~-~~p~~~~f~~~~~ 369 (422)
+++.+..... .++.+++.+.++.+++++.++.+ +++.++++++.+.+.|++ ++. +. ..|.+++|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~ 346 (417)
T 3g7q_A 267 TITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF 346 (417)
T ss_dssp HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred HHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence 9998877654 35678899999999998876654 456778888888888876 442 33 3578899999999
Q ss_pred CC-CCCHHHHHHHHHhCCcEEEeCCCCCC---------CCeEEEEecChhhHHHHHHHHhhh
Q 014594 370 TS-GMDAKKLKDDLAKMGVMIRHYNNKEL---------KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 370 ~~-~~~~~~~~~~L~~~gI~v~~~~~~~~---------~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+. +.+.+++.+.|.++||.++++..+.. ++++||+++.+ .+++.+++++|
T Consensus 347 ~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~--~~~i~~~~~~l 406 (417)
T 3g7q_A 347 KDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPE--PDKIEAGVKIL 406 (417)
T ss_dssp TTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSC--HHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCC--HHHHHHHHHHH
Confidence 86 67899999999999999998765211 57999999872 35677666654
No 74
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=316.41 Aligned_cols=296 Identities=19% Similarity=0.242 Sum_probs=232.1
Q ss_pred CCCCC-cchHHHHHHHHHHc-----CC--CCCCEEEeCCHHHHHHHHHHHhcCCCC----EEEEcCCCchhHHHHHHHcC
Q 014594 124 YIYPD-PESRRLRAALAKDS-----GL--ESDHILVGCGADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNG 191 (422)
Q Consensus 124 ~~y~~-~~~~~lr~~la~~~-----~~--~~~~i~~~~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g 191 (422)
..|++ .|..++|+++++++ |+ ++++|++|+|+++++..++++++++|| .|+++.|+|+.|...++..|
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g 202 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELD 202 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcC
Confidence 56855 47899999999986 44 688999999999999999999999875 99999999999999999999
Q ss_pred CEEEEecCC--CCCCCCHHHHHHHhhcC----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccC
Q 014594 192 AAVVKVPRK--SDFSLNVELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSG 261 (422)
Q Consensus 192 ~~~~~v~~~--~~~~~d~~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~ 261 (422)
++++.++.+ .+|++|+++|++.+++. ++++|+++|||||||.+++.+++++|++. ++++|+||+|.++.+
T Consensus 203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~ 282 (498)
T 3ihj_A 203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 282 (498)
T ss_dssp CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence 999999854 35799999999999742 58999999999999999999998888764 999999999999876
Q ss_pred CCc----hhhh-hh-------cCCcEEEEccChhhh-ccccccceeee---cCHHHHHHHHHhcCC-CCCcHHHHHHHHH
Q 014594 262 LES----RMEW-VK-------KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQP-YNVSVAAEVAACA 324 (422)
Q Consensus 262 ~~~----~~~~-~~-------~~~~~i~~~S~SK~~-~~~G~r~G~i~---~~~~~~~~l~~~~~~-~~~~~~~~~aa~~ 324 (422)
++. .... .. ...++++++||||.| |++|+|+||++ .++++++.+...... ++.+.+.|.++..
T Consensus 283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~ 362 (498)
T 3ihj_A 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI 362 (498)
T ss_dssp CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 431 1111 11 224589999999999 78999999998 689999988766443 5678899999999
Q ss_pred HccCC--------hHH---H-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-----------CCCHHHH-H
Q 014594 325 ALQNP--------IYL---E-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAKKL-K 379 (422)
Q Consensus 325 ~L~~~--------~~~---~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-----------~~~~~~~-~ 379 (422)
+++.+ .|. . ++++++++++.+.+.|++++++.+ .|.+++|+|+++.. +.+.+++ +
T Consensus 363 ~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~ 442 (498)
T 3ihj_A 363 VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYC 442 (498)
T ss_dssp HTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHH
T ss_pred HhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHH
Confidence 99751 233 3 668899999999999999855554 56778889977641 3455554 4
Q ss_pred -HHHHhCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594 380 -DDLAKMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 380 -~~L~~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
+.|.++||.+++|..+. ..+++|++++.++ +++.+++++|
T Consensus 443 ~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~--e~l~~~i~~L 486 (498)
T 3ihj_A 443 MKLLEETGICVVPGSGFGQREGTYHFRMTILPPV--EKLKTVLQKV 486 (498)
T ss_dssp HHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence 44558999999987643 3569999997432 4455555544
No 75
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-37 Score=306.61 Aligned_cols=317 Identities=16% Similarity=0.184 Sum_probs=247.0
Q ss_pred CCCCeEEcCCCCC-CC----CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHc-C-----CCCCCEEE--eCC
Q 014594 93 KPEDIVKIDANEN-PY----GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDS-G-----LESDHILV--GCG 154 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~----~~~~~v~~al~~-~~---~~~~y-~~~~~~~lr~~la~~~-~-----~~~~~i~~--~~G 154 (422)
.+.++|+|+.|.. +. .+++.+.+++.+ .. ..+.| +..+..++|+++++++ + +++++|++ |+|
T Consensus 27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g 106 (412)
T 1yaa_A 27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS 106 (412)
T ss_dssp CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence 3467899999874 22 467889988876 42 23567 5568899999999998 3 35789999 999
Q ss_pred HHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-C-CCCCCCHHHHHHHhhcCC--CeEEEEeCCC
Q 014594 155 ADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVEREK--PKCIFLTSPN 228 (422)
Q Consensus 155 ~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~ 228 (422)
+++++++++ ..++++||+|+++.|+|..+...++..|++++.++. + +++.+|++++++.+++.+ +.++++++||
T Consensus 107 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~ 186 (412)
T 1yaa_A 107 GTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH 186 (412)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred hHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 999999984 334579999999999999999999999999999986 3 367899999999987432 3445558999
Q ss_pred CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCC---cEEEEccChhhhccccccceee
Q 014594 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHD---NLIVLRTFSKRAGLAGLRVGYG 295 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~---~~i~~~S~SK~~~~~G~r~G~i 295 (422)
||||.+++.+++++|++. |+++|+||+|.+|.+++ . ....+ ...+ ++++++||||.+|++|+|+||+
T Consensus 187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~ 266 (412)
T 1yaa_A 187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF 266 (412)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence 999999999988887653 99999999999987653 2 22222 2344 8999999999999889999999
Q ss_pred e--c-----CHH----HHHHHHH-hcCCC-CCcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHHHHHHHccCC-
Q 014594 296 A--F-----PLS----IIEYLWR-AKQPY-NVSVAAEVAACAALQNPI-------YLE-VKEALIKERERLFKLLKDVP- 353 (422)
Q Consensus 296 ~--~-----~~~----~~~~l~~-~~~~~-~~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~l~~~L~~~~- 353 (422)
+ + +++ +++.+.. ....+ +.+.+.+.++.++|++.. +++ .+++++++++++.+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 346 (412)
T 1yaa_A 267 HLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGT 346 (412)
T ss_dssp EEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8 7 566 7777776 33344 558899999999998863 566 88899999999999999876
Q ss_pred --CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594 354 --FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 421 (422)
Q Consensus 354 --~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 421 (422)
.+. ..|.+++|+|+.+ +.+.+.+.+.++||.+.+ ++||+++ +.++++++.++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 347 PGNWDHIVNQCGMFSFTGL----TPQMVKRLEETHAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEV 407 (412)
T ss_dssp SSCCTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCCeeeeccCceEEEeeCC----CHHHHHHHHHhCCEEecc--------CcEEEEccCCHhHHHHHHHHHHHH
Confidence 233 3566778888755 456665555589999986 4799998 666777777777653
No 76
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.5e-38 Score=323.53 Aligned_cols=319 Identities=16% Similarity=0.216 Sum_probs=239.0
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc-------CC---CCCCEEEeCCHHHHHHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GL---ESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~-------~~---~~~~i~~~~G~~~al~~~~~~ 165 (422)
+|+|+.|++.++ ++.+.+++.+......||++ |..++|+++++.+ ++ ++++|++|+|+++++..++++
T Consensus 106 ~i~l~~g~~~~~-~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 106 SLSYVRDQLGLD-PAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp HHHHHHHTSCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hhecccCCCCCC-ChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 688988888874 46666666552223679776 7888999987754 22 357999999999999999987
Q ss_pred -----hcCCCCEEEEcCCCchhHHHHHHH--cCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 166 -----VLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 166 -----l~~~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
++++||+|++++|+|+.|...+.. .|++++.++.+ .+|.+|++++++.+. .++++|++||||||||.+++
T Consensus 185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~ 263 (546)
T 2zy4_A 185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMD 263 (546)
T ss_dssp HHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCC
T ss_pred hhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCC
Confidence 578999999999999999887665 46889998853 357799999998875 68999999999999999999
Q ss_pred HHHHHHHH-----cC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhc
Q 014594 237 DEDLLKIL-----EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAK 309 (422)
Q Consensus 237 ~e~l~~i~-----~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~ 309 (422)
.+++++|+ +. +++||+||+|.+|.++...+... ..+++++++||||.+|++|+|+||++++++ +++.+....
T Consensus 264 ~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~ 342 (546)
T 2zy4_A 264 QRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKL 342 (546)
T ss_dssp HHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred HHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhc
Confidence 98887664 33 89999999999987543222222 246899999999999999999999999875 777763211
Q ss_pred --------------------------------------CCCCCcHHHHHHH-----HHHccC-ChHHH-HHHHHHHHHHH
Q 014594 310 --------------------------------------QPYNVSVAAEVAA-----CAALQN-PIYLE-VKEALIKERER 344 (422)
Q Consensus 310 --------------------------------------~~~~~~~~~~~aa-----~~~L~~-~~~~~-~~~~~~~~~~~ 344 (422)
...+++.+.|.++ .+++++ +.|.+ +++.++++++.
T Consensus 343 p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~ 422 (546)
T 2zy4_A 343 QESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETT 422 (546)
T ss_dssp CHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1135677777763 344554 56777 88899999999
Q ss_pred HHHHHccCCCCcccCCCceEEEEEeCC----------------CCCH-HHHHHHHHhCCcEEEeCCCCC-CCCeEEEEec
Q 014594 345 LFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDA-KKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVG 406 (422)
Q Consensus 345 l~~~L~~~~~~~~~p~~~~f~~~~~~~----------------~~~~-~~~~~~L~~~gI~v~~~~~~~-~~~~iRis~~ 406 (422)
+.+.|. +++....+.+++|+|++++. +.+. +.+.+.|.++||.++||..++ .++++||+++
T Consensus 423 l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~ 501 (546)
T 2zy4_A 423 LYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA 501 (546)
T ss_dssp HHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS
T ss_pred HHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec
Confidence 999996 55322345677889999852 1223 345666679999999998753 4679999998
Q ss_pred Ch--hhHHHHHHHHh
Q 014594 407 KP--EHTDALMECLM 419 (422)
Q Consensus 407 ~~--~~~~~l~~al~ 419 (422)
.. ++++++.++|+
T Consensus 502 ~~~~e~i~~~~~~l~ 516 (546)
T 2zy4_A 502 NLNEYEYAAIGRALR 516 (546)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 63 33334444443
No 77
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.9e-39 Score=319.96 Aligned_cols=307 Identities=16% Similarity=0.120 Sum_probs=245.7
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-C-CC-CCC--CCCc--c---hHHHHHHHHHHcC------CCCCCEEEeCCHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-L-KF-PYI--YPDP--E---SRRLRAALAKDSG------LESDHILVGCGADE 157 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~-~~~--y~~~--~---~~~lr~~la~~~~------~~~~~i~~~~G~~~ 157 (422)
+..+|+|+.|++++++++.+.+++.+ + .. ... |++. | ..+||++++++++ +++++|++|+|+++
T Consensus 55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~ 134 (427)
T 2hox_A 55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ 134 (427)
T ss_dssp TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence 35679999999999877788777765 3 12 233 8654 6 7999999999985 67899999999999
Q ss_pred HHHHHHHHh--------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 158 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
++.+++.++ +++||.|+++.|+|..|...++..|++++. +.+|++.|++.++ .++|+|+++||||
T Consensus 135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~-~~~k~v~l~~p~N 207 (427)
T 2hox_A 135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNN 207 (427)
T ss_dssp HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhc-CCceEEEEcCCCC
Confidence 999999999 899999999999999999999999988764 3467888888886 5789999999999
Q ss_pred ccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHh
Q 014594 230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA 308 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~ 308 (422)
|||.+++ +. ++ ++..+.|++|.+ .......+. .+++++++||||.+|++|+|+||+++ ++++++.+.+.
T Consensus 208 PtG~~~~-~~----l~-~~~~i~d~~~~~---~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~ 277 (427)
T 2hox_A 208 PEGLLRH-AV----IK-GCKSIYDMVYYW---PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY 277 (427)
T ss_dssp TTCCCCC-CS----ST-TCEEEEECTTCS---TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred CcccccH-HH----Hc-CCCEEEeecccC---CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH
Confidence 9999999 42 23 667888888763 111111121 57889999999999999999999999 58999998876
Q ss_pred cCC--CCCcHHHHHHHHHHccCC------------hHHH-HHHHHHHHHHHHHHHHccCCCCcc---------------c
Q 014594 309 KQP--YNVSVAAEVAACAALQNP------------IYLE-VKEALIKERERLFKLLKDVPFLNP---------------Y 358 (422)
Q Consensus 309 ~~~--~~~~~~~~~aa~~~L~~~------------~~~~-~~~~~~~~~~~l~~~L~~~~~~~~---------------~ 358 (422)
... ++++.+.|.++..+|++. ++++ .+++++++++++.+.|++++.+.+ .
T Consensus 278 ~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~ 357 (427)
T 2hox_A 278 MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR 357 (427)
T ss_dssp HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEE
T ss_pred HHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccC
Confidence 653 678999999998888752 3555 788999999999999998743332 3
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014594 359 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 359 p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l 421 (422)
|.+++|+|++++. +..++++.|+ ++||.+++|..++. ++++|||++..+ ++|.+++++|
T Consensus 358 p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~--e~l~~~l~~l 418 (427)
T 2hox_A 358 PPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQ--DDFDQLMYYL 418 (427)
T ss_dssp CCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCH--HHHHHHHHHH
T ss_pred CCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 5568999999974 4566777775 89999999877543 789999999743 5688777765
No 78
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.8e-37 Score=313.26 Aligned_cols=295 Identities=17% Similarity=0.285 Sum_probs=233.3
Q ss_pred CCCCC-cchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEE
Q 014594 124 YIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (422)
Q Consensus 124 ~~y~~-~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 195 (422)
..|+. .|..++|++++++++ +++++|++|+|+++++..++++++ ++||.|+++.|+|..+...++..|++++
T Consensus 128 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 207 (500)
T 3tcm_A 128 GAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALV 207 (500)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred CCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEE
Confidence 56854 578999999999873 678999999999999999999998 8999999999999999999999999999
Q ss_pred EecCCC--CCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-
Q 014594 196 KVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE- 263 (422)
Q Consensus 196 ~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~- 263 (422)
.++.++ +|++|+++|++.+++. ++++|+++||+||||.+++.+++.+|++. |+++|+||+|.++.+++
T Consensus 208 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~ 287 (500)
T 3tcm_A 208 PYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN 287 (500)
T ss_dssp EEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT
T ss_pred EEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCC
Confidence 998543 5799999999999742 78999999999999999999999999654 99999999999977632
Q ss_pred -c--hhh----hh---hcCCcEEEEccChhhh-ccccccceeeec---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHccC
Q 014594 264 -S--RME----WV---KKHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN 328 (422)
Q Consensus 264 -~--~~~----~~---~~~~~~i~~~S~SK~~-~~~G~r~G~i~~---~~~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~ 328 (422)
. ... .+ ....++++++||||.| |++|+|+||+++ ++++++.+.+... .++.+.+.|.++..+++.
T Consensus 288 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~ 367 (500)
T 3tcm_A 288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP 367 (500)
T ss_dssp CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSC
T ss_pred CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence 1 111 12 2234689999999998 899999999998 8999998876654 467899999999999974
Q ss_pred Ch--------H---HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-----------CCCHH-HHH-HHH
Q 014594 329 PI--------Y---LE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAK-KLK-DDL 382 (422)
Q Consensus 329 ~~--------~---~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-----------~~~~~-~~~-~~L 382 (422)
.+ | .+ ++++++++++.+.+.|++++++.+ .|.+++|+|+++.. +...+ .++ +.|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll 447 (500)
T 3tcm_A 368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLL 447 (500)
T ss_dssp CCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHH
Confidence 21 3 33 778899999999999999855554 56778889966531 11122 233 445
Q ss_pred HhCCcEEEeCCCCC---CCCeEEEEecChh-hHHHHHHHH
Q 014594 383 AKMGVMIRHYNNKE---LKGYVRVSVGKPE-HTDALMECL 418 (422)
Q Consensus 383 ~~~gI~v~~~~~~~---~~~~iRis~~~~~-~~~~l~~al 418 (422)
.++||.++++..+. ..+++||+++.++ +++++.++|
T Consensus 448 ~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l 487 (500)
T 3tcm_A 448 ESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRF 487 (500)
T ss_dssp HHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHH
T ss_pred HHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHH
Confidence 58899999988743 3568999998433 333333333
No 79
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.2e-37 Score=303.96 Aligned_cols=337 Identities=15% Similarity=0.123 Sum_probs=249.7
Q ss_pred HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCC---CC--CCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHH
Q 014594 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE---NP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK 140 (422)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~ 140 (422)
.+.++... |.+++..+++++..++.+.|||+.|. .. .+..|.|++|...+ ...+.| |..|.++||+++++
T Consensus 20 ~~~~v~~~-p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~ 98 (420)
T 4h51_A 20 RWQKIQAQ-APDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVK 98 (420)
T ss_dssp HHHTCCCC-CCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred HHhCCCCC-CCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHH
Confidence 44555554 56677778777776666789999983 21 23457888876542 334668 77799999999999
Q ss_pred Hc-C--CCCCC--EEEeCCHHHHHHHHHHH----hcCCCCEEEEcCCCchhHHHHHHHcCCEEEE-ec--CCCCCCCCHH
Q 014594 141 DS-G--LESDH--ILVGCGADELIDLIMRC----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK-VP--RKSDFSLNVE 208 (422)
Q Consensus 141 ~~-~--~~~~~--i~~~~G~~~al~~~~~~----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~-v~--~~~~~~~d~~ 208 (422)
++ | .+.+. .+.|.|++.++...+.. +++|||+|++++|+|+.|...++..|++.+. ++ .+.++.+|.+
T Consensus 99 ~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~ 178 (420)
T 4h51_A 99 IIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFE 178 (420)
T ss_dssp HHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHH
T ss_pred HhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHH
Confidence 85 3 23333 45588888887666554 4579999999999999999999999987543 33 2355778999
Q ss_pred HHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch------hhhhhcCCcEE
Q 014594 209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLI 276 (422)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~~~~~i 276 (422)
.+.+.+.. ++++++++++||||||.+++.+++++|++. ++++|+||+|.+|.+++.. ....+..++++
T Consensus 179 ~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 258 (420)
T 4h51_A 179 GMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVL 258 (420)
T ss_dssp HHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred HHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEE
Confidence 98887753 567788888999999999999999999885 9999999999999875421 12234567899
Q ss_pred EEccChhhhccccccceeeecCHHHHHH-------HHHhc--CCCCCcHHHHHHHHHHccCCh----H---HH-HHHHHH
Q 014594 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEY-------LWRAK--QPYNVSVAAEVAACAALQNPI----Y---LE-VKEALI 339 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~-------l~~~~--~~~~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~ 339 (422)
++.||||.|+++|+|+||++++.+..+. +.... ...+++..+|.++..+|.++. | ++ ++++++
T Consensus 259 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~ 338 (420)
T 4h51_A 259 LAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIR 338 (420)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999885433322 22222 235678889999999998852 3 33 788899
Q ss_pred HHHHHHHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014594 340 KERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDA 413 (422)
Q Consensus 340 ~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~ 413 (422)
++|+.+.+.|++++ |..+.++.|+|.|+.+ +.+. ++.|+++||++.+++ |||++ +.++++.
T Consensus 339 ~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl----s~e~-v~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~ 405 (420)
T 4h51_A 339 TMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL----SKAQ-CEYCQNHNIFITVSG--------RANMAGLTHETALM 405 (420)
T ss_dssp HHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC----CHHH-HHHHHHTTEECCTTC--------EEEGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc----CHHH-HHHHHhCCEEEcCCC--------EEEeccCCHHHHHH
Confidence 99999999998865 3335678899998655 4444 577889999988754 99997 4556666
Q ss_pred HHHHHhh
Q 014594 414 LMECLMH 420 (422)
Q Consensus 414 l~~al~~ 420 (422)
+.++|..
T Consensus 406 ~a~aI~~ 412 (420)
T 4h51_A 406 LAQTIND 412 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666643
No 80
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=2.5e-38 Score=321.59 Aligned_cols=321 Identities=19% Similarity=0.200 Sum_probs=246.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCC-CCcchHHHHHHHHHHc-----C-CC---CCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDS-----G-LE---SDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~~~~~~lr~~la~~~-----~-~~---~~~i~~~~G~~~al~~~~~ 164 (422)
++++|+.|.+.++ ++++++++.+ +.....| |..|..++|+++++++ + +. +++|++|+|+++++..++.
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~ 182 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH 182 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence 4688988888886 4555554443 3322233 4567899999999987 2 22 3699999999999999999
Q ss_pred H-----hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC----CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
+ ++++||+|+++.|+|..+...++..|++++.++. ++++++|+++|++.+. +++++|++++|+||||.++
T Consensus 183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-~~~k~v~l~~p~NPtG~~~ 261 (533)
T 3f6t_A 183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEF 261 (533)
T ss_dssp HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-TTEEEEEEESSCTTTCBCC
T ss_pred HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-CCCeEEEEeCCCCCCcccc
Confidence 8 7899999999999999999888889999999985 3568899999999997 7899999999999999999
Q ss_pred CHHHHHHHHc----C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----HHHHH
Q 014594 236 NDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEYL 305 (422)
Q Consensus 236 ~~e~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-----~~~~l 305 (422)
+.+++.+|++ . ++++|+||+|.+|.++....... ..+++++++||||.+|++|+|+||++++++ +++.+
T Consensus 262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l 340 (533)
T 3f6t_A 262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHL 340 (533)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhc
Confidence 9997777665 5 99999999999988654333322 347899999999999999999999999766 43322
Q ss_pred --------------------------------HHhcC--CCCCcHHHHHH----HHHHcc-------CChHHH-HHHHHH
Q 014594 306 --------------------------------WRAKQ--PYNVSVAAEVA----ACAALQ-------NPIYLE-VKEALI 339 (422)
Q Consensus 306 --------------------------------~~~~~--~~~~~~~~~~a----a~~~L~-------~~~~~~-~~~~~~ 339 (422)
.+... ..+.+.+.|.+ +..+|. ...+++ +++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~ 420 (533)
T 3f6t_A 341 DKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVS 420 (533)
T ss_dssp CHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHH
T ss_pred chhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHH
Confidence 11111 24677888877 556664 236677 889999
Q ss_pred HHHHHHHHHHccCCCCcccCCCceEEEEEeCC------C----------CCHHHHHHHHH-hCCcEEEeCCCCC-CCCeE
Q 014594 340 KERERLFKLLKDVPFLNPYPSYSNFILCEVTS------G----------MDAKKLKDDLA-KMGVMIRHYNNKE-LKGYV 401 (422)
Q Consensus 340 ~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~------~----------~~~~~~~~~L~-~~gI~v~~~~~~~-~~~~i 401 (422)
++++.+.+.|+ +++....|.+++|+|++++. + .+..++...|+ ++||.+.++..+. .++++
T Consensus 421 ~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~i 499 (533)
T 3f6t_A 421 ERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGEL 499 (533)
T ss_dssp HHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEE
T ss_pred HHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEE
Confidence 99999999998 77544567888999999863 1 35667766665 8899999887633 36899
Q ss_pred EEEecChhhHHHHHHHHhhh
Q 014594 402 RVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 402 Ris~~~~~~~~~l~~al~~l 421 (422)
|||++... .+++.+++++|
T Consensus 500 Rls~a~~~-~e~i~~~i~~L 518 (533)
T 3f6t_A 500 RVSQANLP-TEDYALIGKQV 518 (533)
T ss_dssp EEESSSSC-HHHHHHHHHHH
T ss_pred EEEEeeCC-HHHHHHHHHHH
Confidence 99998532 24555555544
No 81
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7.3e-38 Score=311.69 Aligned_cols=323 Identities=18% Similarity=0.181 Sum_probs=248.2
Q ss_pred CCeE-EcCCCCCCCCCC--HHHHHHHhcC-CC-------C------CCCCC-cchHHHHHHHHHHc------CCCCCCEE
Q 014594 95 EDIV-KIDANENPYGPP--PEVREALGQL-KF-------P------YIYPD-PESRRLRAALAKDS------GLESDHIL 150 (422)
Q Consensus 95 ~~~i-~l~~~~~~~~~~--~~v~~al~~~-~~-------~------~~y~~-~~~~~lr~~la~~~------~~~~~~i~ 150 (422)
+++| +|+.+.++..++ +.+.+++.+. .. . ..|+. .+..++|+++++++ ++++++|+
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 110 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA 110 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence 5689 999998877432 4455555542 22 1 45754 47899999999997 57889999
Q ss_pred EeCCHHHHHHHHHHHhcCCCC--------------EEEEc-CCCchhHHHH------HHHcCCEEEEecCCC-----CCC
Q 014594 151 VGCGADELIDLIMRCVLDPGD--------------KIVDC-PPTFTMYEFD------AAVNGAAVVKVPRKS-----DFS 204 (422)
Q Consensus 151 ~~~G~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~------~~~~g~~~~~v~~~~-----~~~ 204 (422)
+|+|+++++++++++++++|| +|+++ .|+|..+... ....|..++.++.+. ++.
T Consensus 111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 190 (444)
T 3if2_A 111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYR 190 (444)
T ss_dssp EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEE
T ss_pred EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccC
Confidence 999999999999999999988 78875 9999988753 234678888888653 357
Q ss_pred CCHHHHHHH---hhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCCchhh-hhhcCCcEE
Q 014594 205 LNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME-WVKKHDNLI 276 (422)
Q Consensus 205 ~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i 276 (422)
+|+++|+++ +. +++++|++++||||||.+++.+++++|++ . |+++|+||+|..+........ .....++++
T Consensus 191 ~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i 269 (444)
T 3if2_A 191 VDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTI 269 (444)
T ss_dssp CCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred CCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEE
Confidence 999999998 44 68999999999999999999777777754 3 999999999986432111111 112357899
Q ss_pred EEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHH
Q 014594 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLL 349 (422)
Q Consensus 277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L 349 (422)
++.||||. +++|+|+||+++++++++.+...... ++.+++.+.++..++++..+.. +++.++++++.+.+.|
T Consensus 270 ~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (444)
T 3if2_A 270 LCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL 348 (444)
T ss_dssp EEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996 78999999999999999988776553 6788899999999998876543 4556778888888877
Q ss_pred cc-CCC--Cc-ccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCC----------CCCeEEEEecChhhHHHH
Q 014594 350 KD-VPF--LN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKE----------LKGYVRVSVGKPEHTDAL 414 (422)
Q Consensus 350 ~~-~~~--~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~----------~~~~iRis~~~~~~~~~l 414 (422)
++ ++. +. ..|..++|+|++++. +.+.+++.+.|.++||.++++..+. ..+++||+++.+ .+++
T Consensus 349 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~--~e~i 426 (444)
T 3if2_A 349 KQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAAD--EQTL 426 (444)
T ss_dssp HHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSC--HHHH
T ss_pred HHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCC--HHHH
Confidence 65 432 22 356788999999986 6789999999999999999876531 126899999872 3566
Q ss_pred HHHHhhh
Q 014594 415 MECLMHL 421 (422)
Q Consensus 415 ~~al~~l 421 (422)
.+++++|
T Consensus 427 ~~~l~~l 433 (444)
T 3if2_A 427 IDGIKVI 433 (444)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=4.1e-36 Score=294.70 Aligned_cols=316 Identities=16% Similarity=0.096 Sum_probs=246.1
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-C---CCC-CCCCC-cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L---KFP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~---~~~-~~y~~-~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
++.++++|+.|++ ++++++.+.+++.+ + ... ..|+. .| ..++++.+++++|. +++++|+|+++++..
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG 118 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 3567899999987 66678898888765 2 111 12322 12 45678888888885 589999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCccCcCCCHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~e 238 (422)
++++++++||.|+++.|+|..+...++..|++++.++. +|++++++.+++. ++++|++++|+||||.+++.+
T Consensus 119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~ 193 (398)
T 3a2b_A 119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP 193 (398)
T ss_dssp HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence 99999999999999999999999999999999999984 6899999999743 789999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCC---chhhhhhcCCc-EEEEccChhhhccccccceeeecCHHHHHHHHHhcC---
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--- 310 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~~~~-~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--- 310 (422)
++.++++. |+++|+||+|..+.++. ......+..++ +++++||||.++++| ||+++++++++.+.....
T Consensus 194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~ 270 (398)
T 3a2b_A 194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVM 270 (398)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccce
Confidence 99999988 99999999999876432 12222222334 699999999999778 999999999998876421
Q ss_pred -CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594 311 -PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 388 (422)
Q Consensus 311 -~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~ 388 (422)
....++....++.++|++.++.+ .+++++++++++.+.|++++ +.+.++.++|+|+.++.+.+..++.+.|.++||.
T Consensus 271 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~ 349 (398)
T 3a2b_A 271 FSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATESPILPIFIRSNEKTFWVTKMLQDDGVF 349 (398)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEE
T ss_pred ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCcE
Confidence 22334444445667776544444 88899999999999999885 4444566899999997555678899999988999
Q ss_pred EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHh
Q 014594 389 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 389 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
++++..+. .++++||+++ +.++++++.++|+
T Consensus 350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~ 386 (398)
T 3a2b_A 350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMV 386 (398)
T ss_dssp CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHH
Confidence 99987643 3589999998 4555555555554
No 83
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=2.2e-36 Score=295.35 Aligned_cols=316 Identities=15% Similarity=0.113 Sum_probs=247.1
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-CC----C-C---CCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-KF----P-Y---IYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~---~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.++|+.+.. .+.++++.+++.+. .. + . .|+. .+..++|+++++++|+++++|++|+|+++++..+++
T Consensus 16 ~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~ 94 (390)
T 1elu_A 16 NKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW 94 (390)
T ss_dssp TSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred CeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHh
Confidence 4689988763 35567888888652 11 1 1 4554 467899999999999988899999999999999999
Q ss_pred Hh-cCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594 165 CV-LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 165 ~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (422)
++ +++||+|+++.|+|+.+... ++..|++++.++.+ +++.+|++++++.++ +++++|++++|+||||.+++.
T Consensus 95 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~ 173 (390)
T 1elu_A 95 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPL 173 (390)
T ss_dssp HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCH
T ss_pred CCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-CCceEEEEeccccCCceecCH
Confidence 99 89999999999999987643 56679999999975 578899999999997 689999999999999999999
Q ss_pred HHHHHHHc----C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh----
Q 014594 238 EDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---- 308 (422)
Q Consensus 238 e~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---- 308 (422)
+++.++++ . |+++|+||+|...... . .+...+.++++.|+||. ..+|.++||+++++++++.+...
T Consensus 174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~-~~~~~~~d~~~~s~~K~-~~~~~g~G~~~~~~~~~~~~~~~~~g~ 248 (390)
T 1elu_A 174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---L-DFSRLEVDYYAFTGHKW-FAGPAGVGGLYIHGDCLGEINPTYVGW 248 (390)
T ss_dssp HHHHHHHHHCCSSSCCEEEEECTTTBTTBC---C-CTTTSCCSEEEEESSST-TCCCTTCEEEEECTTTGGGCCCCSCCT
T ss_pred HHHHHHHhhhhhhcCcEEEEEcccccCCcC---C-ChhhcCCCEEEcccccc-ccCCCceEEEEECHHhHhhcCCccccC
Confidence 99999998 7 9999999999853211 1 12234566899999993 33567799999999887766431
Q ss_pred --------------------cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CCC
Q 014594 309 --------------------KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY---PSY 361 (422)
Q Consensus 309 --------------------~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~~ 361 (422)
...++.+...+.++.++++ +.++++ ++++++++++++.+.|++++.+.+. +..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 328 (390)
T 1elu_A 249 RSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQ 328 (390)
T ss_dssp TTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCS
T ss_pred CcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCcccc
Confidence 1234566676666655554 344566 8899999999999999988545543 456
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
++|++++++.+.+..++.+.|.++||.++++. .++++||+++ +.++++++.++|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 77888898766788999999999999999876 3589999983 556666666666554
No 84
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-35 Score=290.62 Aligned_cols=311 Identities=16% Similarity=0.146 Sum_probs=249.3
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc---chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP---ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~---~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
+.++.+.++++.+++.+... ..|+.. ...++++.+++++|++++ +|++|+|+++++..++++++++||+|+++.|
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~ 117 (393)
T 1vjo_A 39 GPGPSNAHPSVLQAMNVSPV-GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVA 117 (393)
T ss_dssp SSSCCCCCHHHHHHHSSCCC-CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cCCCCCCCHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcC
Confidence 34567788999999987433 245432 246788888888999888 9999999999999999999999999999999
Q ss_pred Cchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 179 ~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
+|+. +...++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+||+
T Consensus 118 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 197 (393)
T 1vjo_A 118 GYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV 197 (393)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred ChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 9998 8888888999999999877778999999999973279999999999999999999999999988 999999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------------------cCCC-C
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------------KQPY-N 313 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------------------~~~~-~ 313 (422)
|. +...+ . .+...+.++++.|+||.++.+| |+||+++++++++.+... ...+ +
T Consensus 198 ~~-~g~~~--~-~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 272 (393)
T 1vjo_A 198 TS-LGGVP--I-FLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHT 272 (393)
T ss_dssp TT-TTTSC--C-CTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSC
T ss_pred cc-ccCcC--C-cccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCC
Confidence 99 32211 1 1223456789999999998777 999999999998887532 1223 7
Q ss_pred CcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHHhC-
Q 014594 314 VSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM- 385 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~~~- 385 (422)
.+.+.+.++.++|+.. .+++ .+++++++++++.+.|++++ +.+.++. ++++++.+|.+.+..++.+.|.++
T Consensus 273 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (393)
T 1vjo_A 273 APINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEH 351 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhC
Confidence 7888999888888762 3456 88899999999999999885 4443333 367888887677889999999976
Q ss_pred CcEEEeCCCCCCCCeEEEEe-c--Chh-hHHHHHHHHhh
Q 014594 386 GVMIRHYNNKELKGYVRVSV-G--KPE-HTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~~~~~~iRis~-~--~~~-~~~~l~~al~~ 420 (422)
||.++++..+..++++||++ + ..+ +++++.++|++
T Consensus 352 gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~ 390 (393)
T 1vjo_A 352 NIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQ 390 (393)
T ss_dssp CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence 99999988655678999994 3 333 35566666554
No 85
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=5.4e-36 Score=292.39 Aligned_cols=317 Identities=15% Similarity=0.117 Sum_probs=249.5
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC---C---CCCCCC---cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK---F---PYIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~---~---~~~y~~---~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
++.+++||+.|++ ++++++++.+++.+ +. . ...|+. .+..++|+++++++|++ +.|++++| ++++..
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-t~a~~~ 114 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS-RALLFISG-FAANQA 114 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-cEEEeCCc-HHHHHH
Confidence 3567899999986 55678899888865 21 1 123432 45789999999999985 45555555 899999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++++++++||.|+++.|+|..+...++..|++++.+|. .|++++++.+++. +++++++++|+||||.+++.++
T Consensus 115 ~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~ 189 (384)
T 1bs0_A 115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE 189 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence 99999999999999999999999888999999999983 5899999998743 3788988999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCC--C-chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGL--E-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---- 311 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~--~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~---- 311 (422)
+.++++. |+++|+||+|..+..+ + ......+. +.+++++||||.++++| ||+++++++++.+......
T Consensus 190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~ 265 (384)
T 1bs0_A 190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS 265 (384)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred HHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcC
Confidence 9999987 9999999999876532 1 11222222 23489999999998766 9999999999888764322
Q ss_pred CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594 312 YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 388 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~ 388 (422)
.+.+++.+.++.++|+..+ +.+ .+++++++++++.+.|++++ +.+.++.++|+|++++.+.+..++.+.|.++||.
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 344 (384)
T 1bs0_A 266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW 344 (384)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcE
Confidence 3678888888888887644 666 88899999999999999986 4555677888899987545678899999999999
Q ss_pred EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 389 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 389 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
++++..+. ..+++||+++ +.++++++.++|+++
T Consensus 345 v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 345 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99877532 3479999998 466666666666654
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.7e-35 Score=284.39 Aligned_cols=314 Identities=16% Similarity=0.132 Sum_probs=249.9
Q ss_pred EcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 99 KIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
.|+. .++.+.++++.+++.+... ..|+. .-..++++.+++++|++ ++++++|+|+++++..++++++++||+|+
T Consensus 22 ~l~~-~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl 99 (386)
T 2dr1_A 22 KLFT-AGPVACFPEVLEIMKVQMF-SHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVL 99 (386)
T ss_dssp EECC-SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEE
T ss_pred eeec-CCCcCCcHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEE
Confidence 4443 3455667899999887432 24532 23567888888889987 67899999999999999999999999999
Q ss_pred EcCCCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594 175 DCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (422)
Q Consensus 175 ~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l 250 (422)
++.|+|+. +...++..|++++.++.+.++.+|++++++++++ +++++|++++|+||||.+.+.+++.++++. |+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 179 (386)
T 2dr1_A 100 VTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLV 179 (386)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEE
T ss_pred EEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeE
Confidence 99999987 8888888999999999877778999999999953 689999999999999999999999999987 9999
Q ss_pred EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH----------------H----hcC
Q 014594 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW----------------R----AKQ 310 (422)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~----------------~----~~~ 310 (422)
|+||+|..+..... +...+.++++.|+||.++.++ ++||+++++++++.+. . ...
T Consensus 180 i~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (386)
T 2dr1_A 180 FVDAVSAMGGADIK----FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKEST 254 (386)
T ss_dssp EEECTTTBTTBCCC----TTTTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSC
T ss_pred EEEccccccCcccc----ccccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCC
Confidence 99999997653211 223456799999999988652 4899999999887762 1 233
Q ss_pred CCCCcHHHHHHHHHHccCC-h--HHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHHHHHHH
Q 014594 311 PYNVSVAAEVAACAALQNP-I--YLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDL 382 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~~-~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L 382 (422)
.++.+...+.++.++|+.. + +++ .+++++++++++.+.|++++ +.+.++ .++++|++++.+.+..++.+.|
T Consensus 255 ~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 333 (386)
T 2dr1_A 255 PSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPGIKGDEVYEAM 333 (386)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCCCCHHHHHHHH
Confidence 5678888898888888752 2 355 88899999999999999885 443333 4788999998667889999999
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 383 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 383 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.++||.++++..+..++++||+++ +.++++++.++|++
T Consensus 334 ~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 374 (386)
T 2dr1_A 334 RKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE 374 (386)
T ss_dssp HHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 988999999875445689999998 45556666555543
No 87
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.6e-35 Score=290.49 Aligned_cols=318 Identities=20% Similarity=0.204 Sum_probs=248.0
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CC--------CCCCCC---cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KF--------PYIYPD---PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~--------~~~y~~---~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~ 161 (422)
.++++|+.++++ +.++.+.+++.+. .. .+.|+. .+..++|++++++++. ++++|++|+|+++++..
T Consensus 27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 105 (420)
T 1t3i_A 27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL 105 (420)
T ss_dssp EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence 357999999988 6789998888752 11 123442 3578999999999998 78899999999999999
Q ss_pred HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++++ +++||+|+++.|+|+. +...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.
T Consensus 106 ~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLGC 184 (420)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTCB
T ss_pred HHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC-CCceEEEEeCCcccccC
Confidence 99999 8999999999999987 566777789999999987778899999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~- 311 (422)
+++.+++.++++. |+++|+||+|..+..... ....+.++++.|+||.+|.+| +||+++++++++.+......
T Consensus 185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~~~~ 258 (420)
T 1t3i_A 185 VNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD----VQLIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGG 258 (420)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCST
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCCccCc----hhhcCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCceecCC
Confidence 9999999999987 999999999986543211 112245689999999888777 89999999998877654321
Q ss_pred ---------------------CCCcHHHHHHHHH-HccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC-----
Q 014594 312 ---------------------YNVSVAAEVAACA-ALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-PS----- 360 (422)
Q Consensus 312 ---------------------~~~~~~~~~aa~~-~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~----- 360 (422)
.+.+.+.+.++.. +++.- .+++ ++++++++++++.+.|++++.+.+. +.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 338 (420)
T 1t3i_A 259 EMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD 338 (420)
T ss_dssp TSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred CccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence 1244445544333 34321 2345 8888999999999999988545543 32
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.++++++.++ +.+.+++.+.|.++||.++++.. .+.++++||+++ +.++++++.++|+++
T Consensus 339 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 339 RAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp BCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEC-CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3777788887 46788899999999999998743 123689999998 556677777777653
No 88
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=6.7e-35 Score=285.59 Aligned_cols=315 Identities=16% Similarity=0.155 Sum_probs=245.9
Q ss_pred cCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 014594 100 IDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC 176 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~ 176 (422)
+..++++.++++++.+++.+....+.++.+ ...++|++++++++.+++ +|++|+|+++++..++++++++||+|+++
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~ 99 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA 99 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred eeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEE
Confidence 455778888899999999874322222333 378999999999999888 89999999999999999999999999999
Q ss_pred CCCchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594 177 PPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (422)
Q Consensus 177 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D 253 (422)
.|+|..+. ..++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+|
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D 179 (396)
T 2ch1_A 100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD 179 (396)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence 99999885 36778999999999877788999999999974379999999999999999999999999987 9999999
Q ss_pred cCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------------------------
Q 014594 254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------------------------- 308 (422)
Q Consensus 254 eay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~------------------------- 308 (422)
|+|.... .+ . .+...+..+++.|++|.++ ++.++|++++++++++.+...
T Consensus 180 ea~~~g~-~~--~-~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (396)
T 2ch1_A 180 AVASLCG-VP--F-YMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK 254 (396)
T ss_dssp CTTTBTT-BC--C-CTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred ccccccC-Cc--c-chhhcCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence 9998321 11 1 1222334577789999764 334579999999988877531
Q ss_pred cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc-----eEEEEEeCCCCCHHHHHH
Q 014594 309 KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKD 380 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~f~~~~~~~~~~~~~~~~ 380 (422)
...++.+...+.++.++|+.. ++++ .+++++++++++.+.|++++ +.+.++.+ .+++++++.+.+..++.+
T Consensus 255 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (396)
T 2ch1_A 255 RYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQ 333 (396)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEEEECCTTCCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEEEEcCCCCCHHHHHH
Confidence 112457778888888888652 4455 88899999999999998875 44444333 488999876778999999
Q ss_pred HHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 381 DLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 381 ~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
.|.+ +||.++++..+..++++||++ + +.++++++.++|++
T Consensus 334 ~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 378 (396)
T 2ch1_A 334 YAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE 378 (396)
T ss_dssp HHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHH
Confidence 9985 599999876544578999998 4 45556666666654
No 89
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=5.6e-35 Score=284.56 Aligned_cols=313 Identities=20% Similarity=0.213 Sum_probs=240.5
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-CCCCC-------C--C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 98 VKIDANENPYGPPPEVREALGQ-LKFPY-------I--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~~~~-------~--y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+.|+.+.+. ++++++++++.+ +...+ . | +..+..++++++++++|+++++|++|+|+++++..+++++
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV 81 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence 677877776 678899988876 22111 0 1 1123578999999999998899999999999999999998
Q ss_pred c----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 167 L----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+ ++||+|+++.|+|+.+...+ +..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~ 160 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED 160 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-CCCeEEEEECCCCCcccccCHHH
Confidence 7 79999999999998776555 6689999999987777899999999997 68999999999999999999999
Q ss_pred HHHHHcC-C--CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH--HHHHHHh-----c
Q 014594 240 LLKILEM-P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--IEYLWRA-----K 309 (422)
Q Consensus 240 l~~i~~~-~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~--~~~l~~~-----~ 309 (422)
+.++++. | +++|+||+|. +.... . .+...+.++++.|+||.+|++| +||+++++++ .+.+... .
T Consensus 161 i~~l~~~~~~~~~li~Dea~~-~~~~~--~-~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T 1eg5_A 161 VTRIVKKKNKETLVHVDAVQT-IGKIP--F-SLEKLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGL 234 (384)
T ss_dssp HHHHHHHHCTTCEEEEECTTT-TTTSC--C-CCTTTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTT
T ss_pred HHHHHHhcCCceEEEEEhhhh-cCCcc--c-CchhcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccc
Confidence 9999987 8 9999999998 32111 1 1222356789999999998778 7999998875 2222111 1
Q ss_pred CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCC---CceEEEEEeCCCCCHHHHHHHHH
Q 014594 310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPS---YSNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~---~~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
..++.+.+.+.++.++|+. .++++ .+++++++++++.+.|++.+ +.+ .+. .+.++++.++ +.+.+++.+.|.
T Consensus 235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 312 (384)
T 1eg5_A 235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFP-NIRGSTLQNLLS 312 (384)
T ss_dssp BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECT-TCCHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeC-CCCHHHHHHHHh
Confidence 3467888999888888876 34566 88899999999999998854 443 222 2457778887 467889999999
Q ss_pred hCCcEEEeCCCCC-------------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNNKE-------------------LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~~~-------------------~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++||.++++..+. ..+++||+++ +.++++++.++|++
T Consensus 313 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 371 (384)
T 1eg5_A 313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEE 371 (384)
T ss_dssp HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 9999999865421 1379999998 56666666666654
No 90
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6.4e-35 Score=286.31 Aligned_cols=318 Identities=17% Similarity=0.177 Sum_probs=247.0
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CC----CCCC-------CCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KF----PYIY-------PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~y-------~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~ 161 (422)
.++++|+.+.++ +.++++.+++.+. .. .+.| +..+..++|++++++++. ++++|++|+|+++++..
T Consensus 22 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 100 (406)
T 1kmj_A 22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL 100 (406)
T ss_dssp EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence 357999999887 5778888888652 11 1211 233567899999999998 67899999999999999
Q ss_pred HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (422)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (422)
+++++ +++||+|+++.|+|+. +...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~ 179 (406)
T 1kmj_A 101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT 179 (406)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred HHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc-cCCeEEEEeCCCccccC
Confidence 99999 8999999999999864 445567789999999987777899999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (422)
Q Consensus 234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~- 311 (422)
+++.+++.++++. |+++|+||+|..+..... +...+.++++.|+||.+|.+| +||+++++++++.+......
T Consensus 180 ~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~----~~~~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~~~~ 253 (406)
T 1kmj_A 180 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG 253 (406)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCST
T ss_pred cCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc----ccccCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcccCC
Confidence 9999999999987 999999999986542111 122356689999999998777 89999999998877543321
Q ss_pred ----------------------CCCcHHHHHHHH-HHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--Cce
Q 014594 312 ----------------------YNVSVAAEVAAC-AALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSN 363 (422)
Q Consensus 312 ----------------------~~~~~~~~~aa~-~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~ 363 (422)
.+.+.+.+.++. ++++.. .+++ .+++++++++++.+.|++++.+.+.++ .++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 333 (406)
T 1kmj_A 254 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG 333 (406)
T ss_dssp TSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred CceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCC
Confidence 123344444433 444432 2455 888899999999999999855555444 577
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
|+++.++ +.+..++.+.|.++||.++++.. .+.++++||+++ +.++++++.++++++
T Consensus 334 ~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEC-CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 7777886 56788999999999999998763 233689999998 566777777777653
No 91
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-34 Score=278.77 Aligned_cols=307 Identities=15% Similarity=0.131 Sum_probs=238.5
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (422)
+.++.++++++++++.+....+.|+.. ...++|+++++++|++++++++|+|+++++..++++++++||+|+++.|+|
T Consensus 6 ~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~ 85 (352)
T 1iug_A 6 TPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGK 85 (352)
T ss_dssp SSSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSH
T ss_pred cCCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCc
Confidence 346677889999999874332344432 468999999999999888999999999999999999999999999999999
Q ss_pred hhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccC
Q 014594 181 TMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA 255 (422)
Q Consensus 181 ~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Dea 255 (422)
+.+. ..++..|++++.++.++++.+|++++++ +++++|++++|+||||.+++.+++.++++. |+++|+||+
T Consensus 86 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a 161 (352)
T 1iug_A 86 FSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMV 161 (352)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECT
T ss_pred hhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECC
Confidence 8865 4455689999999987777789888876 478999999999999999999999999974 899999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhh-hccccccceeeecCHHHHHH---------HH-------HhcCCCCCcHHH
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEY---------LW-------RAKQPYNVSVAA 318 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~r~G~i~~~~~~~~~---------l~-------~~~~~~~~~~~~ 318 (422)
|..... + .. ....+.++++.|+||. ++.+| +||+++++++++. +. .....++.+...
T Consensus 162 ~~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (352)
T 1iug_A 162 TSLLVG-E--VA-LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINL 235 (352)
T ss_dssp TTBTTB-C--CC-SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred ccccCc-c--ee-ccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence 973221 1 11 1122455889999994 44334 7999999987754 21 122346678888
Q ss_pred HHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594 319 EVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 319 ~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 394 (422)
+.++.++++. .++++ .+++++++++++.+.|++++ +.+.++ .++++|++++++.+..++.+.|.++||.++++..
T Consensus 236 ~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~ 314 (352)
T 1iug_A 236 VLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQG 314 (352)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCC
Confidence 7777777764 23355 88899999999999999884 444433 6789999998667889999999999999999875
Q ss_pred CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 395 KELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 395 ~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+..++++||+++ +.++++++.++|++
T Consensus 315 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 343 (352)
T 1iug_A 315 PLKGKVFRLSLMGAYDRYEALGVAGMFRE 343 (352)
T ss_dssp GGTTTEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEccccCCHHHHHHHHHHHHH
Confidence 445689999998 45566666666654
No 92
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=5.4e-34 Score=277.63 Aligned_cols=310 Identities=13% Similarity=0.070 Sum_probs=241.3
Q ss_pred CCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 014594 102 ANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (422)
Q Consensus 102 ~~~~~~~~~~~v~~al~~~~~~~~y~~--~~~~~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~ 177 (422)
.+..|.++++++++++.+....+.++. ....++++++++++++++ ++|++|+|+++++. ++..++++||+|+++.
T Consensus 6 ~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~ 84 (384)
T 3zrp_A 6 LHVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVS 84 (384)
T ss_dssp CCSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEEC
T ss_pred ccCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEec
Confidence 344677788999999987422222222 246789999999999987 88999999999999 9998999999999999
Q ss_pred CCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594 178 PTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (422)
Q Consensus 178 p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De 254 (422)
|+|+. +...++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 164 (384)
T 3zrp_A 85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDG 164 (384)
T ss_dssp SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEEC
T ss_pred CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEEC
Confidence 99965 5566677899999999877888999999999986589999999999999999999999999998 99999999
Q ss_pred CCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------HH-----------hcC
Q 014594 255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-----------AKQ 310 (422)
Q Consensus 255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~~-----------~~~ 310 (422)
+|....... .....+.++++.|+||.++ ++.++||+++++++++.+ .. ...
T Consensus 165 a~~~~~~~~----~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (384)
T 3zrp_A 165 VSSVGAEEV----KAEEWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAA 239 (384)
T ss_dssp TTTTTTSCC----CTTTTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCC
T ss_pred cccccCccc----cccccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCC
Confidence 998543211 1123345689999999875 334589999999998877 11 222
Q ss_pred CC-CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----CceEEEEEeCCCCCHHHHHHH
Q 014594 311 PY-NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSGMDAKKLKDD 381 (422)
Q Consensus 311 ~~-~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~f~~~~~~~~~~~~~~~~~ 381 (422)
.+ +.+...+.++.++++. ...++ ++++++++++++.+.|++++ +.+.++ .++++++.++. .+..++.+.
T Consensus 240 ~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 317 (384)
T 3zrp_A 240 YFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV-ADPQKVLAG 317 (384)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-SCHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-CCHHHHHHH
Confidence 33 5676666666666653 12245 88899999999999999884 444333 36788899985 789999999
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 382 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 382 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++||.++++..... +++||++. +.++++++.++|++
T Consensus 318 l~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~ 358 (384)
T 3zrp_A 318 TVNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIER 358 (384)
T ss_dssp HHTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHH
Confidence 9989999998774322 89999987 45666666666654
No 93
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=4.1e-35 Score=287.32 Aligned_cols=316 Identities=16% Similarity=0.168 Sum_probs=244.9
Q ss_pred CCCeEEcCCCCCCC--CCCHHHHHHHhcC----CC---CCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 94 PEDIVKIDANENPY--GPPPEVREALGQL----KF---PYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 94 ~~~~i~l~~~~~~~--~~~~~v~~al~~~----~~---~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.++|||+.| +++ .++|++.+++.+. .. ...|+ .....+++++++++++.+ ++|++++| ++++..
T Consensus 42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~ 118 (399)
T 3tqx_A 42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-DTILYSSC-FDANGG 118 (399)
T ss_dssp TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHT
T ss_pred CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-cEEEECch-HHHHHH
Confidence 4578999999 444 4578888877652 11 12222 224689999999999964 56666555 779999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~ 236 (422)
++++++++||.|+++.|+|..+...++..|++++.++. .|++.+++.+++. ++++|++++|+||||.+++
T Consensus 119 ~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~ 193 (399)
T 3tqx_A 119 LFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD 193 (399)
T ss_dssp THHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC
Confidence 99999999999999999999999999999999999984 4678888888641 7999999999999999999
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
.+++.++|+. |+++|+||+|.....+. ......+ ..+.+++++||||.++ |++.||+++++++++.+......
T Consensus 194 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~ 271 (399)
T 3tqx_A 194 LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRP 271 (399)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcc
Confidence 9999999987 99999999996322211 2222222 1355699999999987 45569999999999988775432
Q ss_pred ----CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhC
Q 014594 312 ----YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM 385 (422)
Q Consensus 312 ----~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~ 385 (422)
.+.++..+.++.++++.. ++.+ .+++++++++++.+.|++++ +.+.++.++|+|+.++...+..++.+.|.++
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
T 3tqx_A 272 YLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG-FQLVPGNHPIIPVMLGDAQLATNMADHLLQE 350 (399)
T ss_dssp HHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSEEEEEEECHHHHHHHHHHHHHT
T ss_pred eeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 367888888888888765 5566 89999999999999999886 3445788899999997655678999999999
Q ss_pred CcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 386 GVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
||.++++..+ ...+++||+++ +.++++++.++|++
T Consensus 351 gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 391 (399)
T 3tqx_A 351 GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQ 391 (399)
T ss_dssp TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHH
Confidence 9999976542 33579999997 45555555555543
No 94
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=7e-36 Score=289.89 Aligned_cols=313 Identities=15% Similarity=0.140 Sum_probs=241.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCC----------CC-CCCcchHHHHHH-HHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFP----------YI-YPDPESRRLRAA-LAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~----------~~-y~~~~~~~lr~~-la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+++++|+.+.+..++++++.+++.+. ... .. ++..+..+++++ ++++++.+ +|++|+|+++++..
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~ 84 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFA 84 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHH
Confidence 45789998777777889999999863 211 11 245678999999 99999986 99999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~ 235 (422)
++++++++||+|+++.|+|+.+...++..|++++.++ .++++.+|++++++.+++ +++++|++++|+||||.++
T Consensus 85 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~ 164 (371)
T 2e7j_A 85 VMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP 164 (371)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC
Confidence 9999999999999999999999888999999999999 777789999999999964 5789999999999999999
Q ss_pred CHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-HHHhcC---
Q 014594 236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQ--- 310 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-l~~~~~--- 310 (422)
+.+++.++++. |+++|+||+|..+..... .. ..+.++++.|+||.++. |.|+||+++++++++. +.....
T Consensus 165 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (371)
T 2e7j_A 165 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVS-LK---EIGADFIVGSGHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYKN 239 (371)
T ss_dssp CHHHHHHHHHTTTCCEEEECTTTBTTBCCC-HH---HHTCSEEEEEHHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred CHHHHHHHHHHcCCeEEEECccccCCCCCC-hh---hcCCCEEEecCCcCCCC-CCCcEEEEEechhhhhhccccccCcc
Confidence 99999999998 999999999997653212 11 12344899999998874 4599999999988776 654433
Q ss_pred ------CCCCcHHHHHHHHHHccCChHHHHHHHH--HHHHHHHHHHHccCCCCccc-CC--CceEEEEEeCCCCCHHHHH
Q 014594 311 ------PYNVSVAAEVAACAALQNPIYLEVKEAL--IKERERLFKLLKDVPFLNPY-PS--YSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 311 ------~~~~~~~~~~aa~~~L~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~-p~--~~~f~~~~~~~~~~~~~~~ 379 (422)
.++.+...+.++.++++.... +..+++ +++++++.+.|++++ +.+. +. .++++|++++ +..++.
T Consensus 240 ~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~ 314 (371)
T 2e7j_A 240 KEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKLG-IKQLGDNPHNHDLMFFHAE---VLYEIS 314 (371)
T ss_dssp SBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHTT-CEEESSSSCCSSEEEEECH---HHHHHH
T ss_pred cccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCccCceEEEECC---CHHHHH
Confidence 445566666666566543221 355566 888899999998874 4433 32 4789999986 678899
Q ss_pred HHHHhCCcEEEeCCCC-----C-CCCeEE-EEecC----hhhHHHHHHHHhh
Q 014594 380 DDLAKMGVMIRHYNNK-----E-LKGYVR-VSVGK----PEHTDALMECLMH 420 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~-----~-~~~~iR-is~~~----~~~~~~l~~al~~ 420 (422)
+.|.++||.+.+ ..+ + .++++| |+++. .++++++.++|+.
T Consensus 315 ~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~ 365 (371)
T 2e7j_A 315 KKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE 365 (371)
T ss_dssp HHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence 999899999987 321 1 168999 99873 4455555555543
No 95
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=5.6e-34 Score=278.64 Aligned_cols=316 Identities=14% Similarity=0.105 Sum_probs=242.6
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
.+.|+.+ ++.++++++++++.+....+.|+. ....++|+++++++|+++++|++|+|+++++..++++++++||+|+
T Consensus 9 ~~yl~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl 87 (392)
T 2z9v_A 9 PVITLTA-GPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVL 87 (392)
T ss_dssp CSEECSS-SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEE
T ss_pred cceeecC-CCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEE
Confidence 3667665 456778999999987432233332 2467899999999999889999999999999999999999999999
Q ss_pred EcCCCchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594 175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (422)
Q Consensus 175 ~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l 250 (422)
++.|+|+.+ ...++..|++++.++.++++.+|++++++++++ +++++|++++|+||||.+++.+++.++++. |+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 167 (392)
T 2z9v_A 88 NLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYL 167 (392)
T ss_dssp EEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred EecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence 999999865 344455799999999876777999999999953 579999999999999999999999999987 9999
Q ss_pred EEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhc--------------------
Q 014594 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK-------------------- 309 (422)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~-------------------- 309 (422)
|+||+|..... + .. +...+.++++.|+||.+ +.+| +||+++++++++.+....
T Consensus 168 i~D~a~~~g~~-~--~~-~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 241 (392)
T 2z9v_A 168 IVDAVSSFGGM-K--TH-PEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRD 241 (392)
T ss_dssp EEECTTTBTTB-S--CC-GGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTT
T ss_pred EEEcccccCCc-c--cc-cccccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhccc
Confidence 99999984221 1 11 12224568899999954 4455 599999999988875421
Q ss_pred --CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccC-C----CceEEEEEeCCCCCHHHHH
Q 014594 310 --QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYP-S----YSNFILCEVTSGMDAKKLK 379 (422)
Q Consensus 310 --~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~----~~~f~~~~~~~~~~~~~~~ 379 (422)
..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++ +.+.+ + .+++++++++++.+..++.
T Consensus 242 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T 2z9v_A 242 KPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTAVRTPDGVDEKALR 320 (392)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEEEECCCCCCHHHHH
Confidence 12455666666666666542 22 45 88889999999999998874 44332 3 4678899997667889999
Q ss_pred HHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 380 DDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 380 ~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
+.|.++ ||.++++..+..++++||++ + +.++++++.++|++
T Consensus 321 ~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~ 366 (392)
T 2z9v_A 321 QAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG 366 (392)
T ss_dssp HHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence 999976 99999987555578999994 5 45566666665543
No 96
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=5.7e-34 Score=275.49 Aligned_cols=314 Identities=10% Similarity=0.036 Sum_probs=243.7
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
+++|+.| |+++++++.+++.+.. .+.|+. .+..++|+++++++|.+ ++++++|+|+++++..++++++++||
T Consensus 5 ~~~~~~g--p~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd 81 (366)
T 1m32_A 5 YLLLTPG--PLTTSRTVKEAMLFDS-CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQD 81 (366)
T ss_dssp CEECSSS--SCCCCHHHHHTTCCCC-CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTC
T ss_pred cccccCC--CcCCCHHHHHHHhhhh-cCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCC
Confidence 5778777 6778899999998732 244543 56789999999999932 24799999999999999999999999
Q ss_pred EEEEcC-CCchh-HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594 172 KIVDCP-PTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (422)
Q Consensus 172 ~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~ 247 (422)
+|++.. ++|+. +...++..|++++.++.+.++.+|++++++++++. ++++|++++|+||||.+++.+++.++++. |
T Consensus 82 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 161 (366)
T 1m32_A 82 KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYG 161 (366)
T ss_dssp CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHT
T ss_pred eEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcC
Confidence 988776 56654 56677778999999998777789999999999753 68999999999999999999999999988 9
Q ss_pred CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc------------------
Q 014594 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------------------ 309 (422)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~------------------ 309 (422)
+++|+||+|..+..... +...+.++++.|+||.++ ++.++||+++++++++.+....
T Consensus 162 ~~li~Dea~~~~~~~~~----~~~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (366)
T 1m32_A 162 KTYIVDAMSSFGGIPMD----IAALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNH 236 (366)
T ss_dssp CEEEEECTTTTTTSCCC----TTTTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTT
T ss_pred CEEEEECCccccCcCcc----ccccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccC
Confidence 99999999985432111 222345689999999763 2335799999998876654321
Q ss_pred --CCCCCcHHHHHHHHHHccCC-hH--HH-HHHHHHHHHHHHHHHHccCCCCccc-C---CCceEEEEEeCC--CCCHHH
Q 014594 310 --QPYNVSVAAEVAACAALQNP-IY--LE-VKEALIKERERLFKLLKDVPFLNPY-P---SYSNFILCEVTS--GMDAKK 377 (422)
Q Consensus 310 --~~~~~~~~~~~aa~~~L~~~-~~--~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p---~~~~f~~~~~~~--~~~~~~ 377 (422)
..++.+...+.++.++|+.. ++ ++ .+++++++++++.+.|++++ +.+. + ..++++|+++++ +.+..+
T Consensus 237 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T 1m32_A 237 GKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIITAFYSPEDPQYRFSE 315 (366)
T ss_dssp TCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCCCTTCCHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEEEEEcCccCCCCHHH
Confidence 12567788777777777652 22 45 88899999999999999875 3432 3 245689999985 678899
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+.|.++||.++++..+ .++++||+++ +.++++++.++|++
T Consensus 316 ~~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 316 FYRRLKEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp HHHHHHHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 999999999999987654 4689999998 45666777666654
No 97
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=8.5e-34 Score=279.01 Aligned_cols=313 Identities=14% Similarity=0.049 Sum_probs=245.5
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCC-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~-i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
+..|.++++++.+++.+....+.++.. ...+++++++++++.+.++ +++++|++++++.++++++++||+|+++.|+
T Consensus 18 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~ 97 (411)
T 3nnk_A 18 GPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFG 97 (411)
T ss_dssp SSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred cCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCC
Confidence 356788899999999874332333322 2578999999999987665 8899999999999999999999999999999
Q ss_pred chh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594 180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay 256 (422)
|+. +...++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+.+.+++.++|+. |+++|+||+|
T Consensus 98 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~ 177 (411)
T 3nnk_A 98 RFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATA 177 (411)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTT
T ss_pred chHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCc
Confidence 976 8888888999999999888888999999999975589999999999999999999999999987 9999999998
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---------------------------
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--------------------------- 309 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--------------------------- 309 (422)
...... ......+.++++.|++|.++ ++.++||+++++++++.+....
T Consensus 178 ~~~~~~----~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~ 252 (411)
T 3nnk_A 178 SLGGNP----LETDVWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLG 252 (411)
T ss_dssp TBTTBC----CCTTTTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHH
T ss_pred ccCCcc----cchhccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchH
Confidence 743211 11123345689999999743 3346899999999999887643
Q ss_pred -----------CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCC
Q 014594 310 -----------QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG 372 (422)
Q Consensus 310 -----------~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~ 372 (422)
..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++.....+. .++++++.+|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (411)
T 3nnk_A 253 MVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQG 332 (411)
T ss_dssp HHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTT
T ss_pred HHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCC
Confidence 12456777777777777642 22 55 888999999999999998854333333 367889999877
Q ss_pred CCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 373 MDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 373 ~~~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
.+.+++.+.|.++ ||.++++.....++++||++ + +.++++++.++|++
T Consensus 333 ~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 385 (411)
T 3nnk_A 333 INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA 385 (411)
T ss_dssp CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence 8899999999865 99999876545568999998 5 34555666655544
No 98
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=2.4e-34 Score=282.37 Aligned_cols=316 Identities=17% Similarity=0.213 Sum_probs=246.6
Q ss_pred CCCCeEEcCCCCCCCC--CCHHHHHHHhc-CC-CCC-----CCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPY-----IYP---DPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~-----~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
++.++|||+.+ ++++ +++++.+++.+ +. ++. .|+ ..+..++|+++++++|++ ++|++++| ++++.
T Consensus 43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~ 119 (401)
T 1fc4_A 43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSC-FDANG 119 (401)
T ss_dssp TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred CCccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCCh-HHHHH
Confidence 45678999998 5676 48999888875 21 121 232 345789999999999986 56666555 67888
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~ 235 (422)
.++++++++||.|+++.|+|..+...++..|++++.++ ..|++++++.+++. ++++|++++|+||||.++
T Consensus 120 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~ 194 (401)
T 1fc4_A 120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA 194 (401)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred HHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEEC-----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC
Confidence 89999999999999999999888778888999999987 35789999988631 789999999999999999
Q ss_pred CHHHHHHHHcC-CCeEEEccCCc-cccC-CCc-hhhhhh-cCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhc
Q 014594 236 NDEDLLKILEM-PILVVLDEAYT-EFSG-LES-RMEWVK-KHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK 309 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~-~~~~-~~~-~~~~~~-~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~ 309 (422)
+.+++.++++. |+++|+||+|. ++.+ .+. .....+ ..+.+++++||||.+ +.+| ||+++++++++.+....
T Consensus 195 ~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~~~~l~~~~ 271 (401)
T 1fc4_A 195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEVVEWLRQRS 271 (401)
T ss_dssp CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHHHHHHHHhC
Confidence 99999999987 99999999995 7753 222 222122 124579999999998 5444 99999999999887654
Q ss_pred C----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594 310 Q----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 384 (422)
Q Consensus 310 ~----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~ 384 (422)
. .++.+.+.+.++.++|+..+..+ .+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.+
T Consensus 272 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 350 (401)
T 1fc4_A 272 RPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG-FTLAGADHAIIPVMLGDAVVAQKFARELQK 350 (401)
T ss_dssp HHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT-CCBCCSSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred cCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCEEEEEcCChHHHHHHHHHHHH
Confidence 2 35788999999988886533234 88889999999999999885 444578899999999754567889999999
Q ss_pred CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 385 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 385 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+||.++++..+. ..+++||+++ +.++++++.++|++
T Consensus 351 ~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 351 EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999999876533 3468999998 55666666666554
No 99
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-34 Score=282.54 Aligned_cols=316 Identities=15% Similarity=0.128 Sum_probs=242.7
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCC-----CCCCC-----CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKF-----PYIYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~y~-----~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+.|+.+.++ ++++++.+++.+ +.. ...|+ .....++|+++++++|+++++|++|+|+++++.++++
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~ 104 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAE 104 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHH
Confidence 47899988877 678889888875 211 11243 2346789999999999988899999999999999999
Q ss_pred Hh---cCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 165 CV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 165 ~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
++ +++||+|+++.|+|+.+...+. ..|++++.++.+ +++.+|+++|++.++ +++++|++++|+||||.+++
T Consensus 105 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~ 183 (406)
T 3cai_A 105 ASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTD 183 (406)
T ss_dssp HTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-TTEEEEEEESBCTTTCBBCC
T ss_pred HHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-CCceEEEEeCCcCCccccCC
Confidence 87 7899999999999986544333 379999999976 667899999999997 68999999999999999999
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcC----
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQ---- 310 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~---- 310 (422)
.++|.++++. |+++|+||+|........ . ...+.++++.|+||.+| ++ +| |+++++++++.+.....
T Consensus 184 l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~---~~~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~ 256 (406)
T 3cai_A 184 LRAMTKLVHDVGALVVVDHSAAAPYRLLD-I---RETDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYA 256 (406)
T ss_dssp CHHHHHHHHHTTCEEEEECTTTTTTCCCC-H---HHHCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTC
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCCCCC-c---hhcCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCC
Confidence 9999999987 999999999984321111 1 12245688999999776 44 89 99999998877654421
Q ss_pred -------CCCCcHHHHHHHHHHcc---CCh-------------HHH-HHHHHHHHHHHHHHHHccCCCCcccCC---Cce
Q 014594 311 -------PYNVSVAAEVAACAALQ---NPI-------------YLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSN 363 (422)
Q Consensus 311 -------~~~~~~~~~~aa~~~L~---~~~-------------~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~ 363 (422)
.++.+...+.++.++++ ..+ +++ .+++++++++++.+.|++++.+.+.++ .++
T Consensus 257 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 336 (406)
T 3cai_A 257 TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP 336 (406)
T ss_dssp CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS
T ss_pred CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC
Confidence 34566666555544443 211 456 888999999999999998865554333 255
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
++++.++ +.+.+++.+.|.++||.++++.. ....+++||+++. .++++++.++|+.+
T Consensus 337 ~~~~~~~-~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 337 VVSFAVH-KVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EEEEEET-TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EEEEEEC-CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 8888887 46788999999999999998761 1135899999984 56677777777654
No 100
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=3.6e-34 Score=275.50 Aligned_cols=309 Identities=16% Similarity=0.083 Sum_probs=239.7
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
+.+|+++++++++++.+....+.|+.. ...++|+++++++|++ +++|++|+|+++++..+++++++ |+|+++.|
T Consensus 5 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~ 82 (353)
T 2yrr_A 5 TPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVN 82 (353)
T ss_dssp SSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEEC
T ss_pred CCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcC
Confidence 456778889999999874322455443 4789999999999985 67899999999999999998876 88999999
Q ss_pred CchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
.|+.+ ...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+||+
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a 162 (353)
T 2yrr_A 83 GAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV 162 (353)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred CCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence 99875 455677899999999877778999999999974389999999999999999999999999988 999999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHH-----------------HhcCCCCCcHH
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW-----------------RAKQPYNVSVA 317 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~-----------------~~~~~~~~~~~ 317 (422)
|..... +.... ..+..+++.|++|.+ +.+| +||+++++++++.+. .....++.+..
T Consensus 163 ~~~~~~-~~~~~---~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 2yrr_A 163 TTLGML-PFSMR---AMGVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL 236 (353)
T ss_dssp TTTTTS-CCCHH---HHTCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred cccccc-ccccc---ccCceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH
Confidence 963322 11111 223347888999954 4455 799999999887653 11223567777
Q ss_pred HHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 318 AEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 318 ~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
.+.++.++++.. ..++ .+++++++++++.+.|++++ +.+.++ .+++++++++.+.+.+++.+.|.++||.+++
T Consensus 237 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 315 (353)
T 2yrr_A 237 LHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARG-FRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAG 315 (353)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeC
Confidence 777777776542 2255 88899999999999998874 444332 4556789987677899999999999999999
Q ss_pred CCCCCCCCeEEEEe---cChhhHH-HHHHHHhh
Q 014594 392 YNNKELKGYVRVSV---GKPEHTD-ALMECLMH 420 (422)
Q Consensus 392 ~~~~~~~~~iRis~---~~~~~~~-~l~~al~~ 420 (422)
+..+..++++||++ .+.++++ ++.++|++
T Consensus 316 g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~ 348 (353)
T 2yrr_A 316 GIGPTRGQVLRLGLMGEGARREAYQAFLKALDR 348 (353)
T ss_dssp CCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHH
T ss_pred CccccCCCeEEEecCccCCHHHHHHHHHHHHHH
Confidence 87655578999998 4566666 67676654
No 101
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=7.9e-34 Score=277.69 Aligned_cols=315 Identities=17% Similarity=0.147 Sum_probs=241.8
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 97 IVKIDANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~--~~~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
.+.+. .+++++++++.+++.+....+.++ .....++++++++++|++++ +|++|+|+++++..++++++++||+|
T Consensus 20 ~~~~~--~g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 97 (393)
T 2huf_A 20 KLLMG--PGPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVI 97 (393)
T ss_dssp CEECS--SSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred eEEec--CCCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence 35554 446778899999998743322222 23578999999999999776 89999999999999999999999999
Q ss_pred EEcCCCchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594 174 VDCPPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (422)
Q Consensus 174 l~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l 250 (422)
+++.|+|+.+. ..++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++
T Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l 177 (393)
T 2huf_A 98 LIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLL 177 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred EEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEE
Confidence 99999998743 34566899999999877778999999999973379999999999999999999999999987 9999
Q ss_pred EEccCCccccCCCchhhhhhcCCcEEEEccChhh-hccccccceeeecCHHHHHHHHHhc---CC---------------
Q 014594 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEYLWRAK---QP--------------- 311 (422)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~r~G~i~~~~~~~~~l~~~~---~~--------------- 311 (422)
|+||+|..... ... +...+.++++.|+||. +|++|+ ||+++++++++.+.... .+
T Consensus 178 i~D~a~~~~~~---~~~-~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 2huf_A 178 IVDTVASLGGA---PMF-MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF 251 (393)
T ss_dssp EEECTTTBTTB---CCC-TTTTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred EEEcccccCCC---Ccc-hhhcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence 99999864221 111 2234567899999996 456775 99999999998887541 11
Q ss_pred -------CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHH
Q 014594 312 -------YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKK 377 (422)
Q Consensus 312 -------~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~ 377 (422)
.+.+...+.++.++++.. ..++ .+++++++++++.+.|++++ +.+.++ .+.+++++++.+.+.++
T Consensus 252 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 2huf_A 252 GRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLSTVTTIKVPQGVDWLK 330 (393)
T ss_dssp SSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCTTEEEEECCTTCCHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCCcEEEEEcCCCCCHHH
Confidence 245666777666676542 2355 88889999999999999885 443332 23588899876678899
Q ss_pred HHHHHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 378 LKDDLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 378 ~~~~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
+.+.|.+ +||.++++..+..++++||++ + +.++++++.++|+.
T Consensus 331 ~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~ 378 (393)
T 2huf_A 331 AAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQE 378 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHH
Confidence 9999985 599999877555578999999 4 34456666666654
No 102
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=8.5e-34 Score=277.08 Aligned_cols=314 Identities=13% Similarity=0.108 Sum_probs=243.6
Q ss_pred CCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 102 ANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 102 ~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
.+.+|.++++++.+++.+....+.++.. ...+++++++++++.+.+ +|++|+|+++++..++++++++||+|+++.+
T Consensus 27 ~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~ 106 (393)
T 3kgw_A 27 LGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTN 106 (393)
T ss_dssp CSSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEES
T ss_pred ccCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeC
Confidence 4457778899999999873222334332 357899999999998655 5999999999999999999999999999999
Q ss_pred Cch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 179 TFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 179 ~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
+|. .+...++..|++++.++.+.++.+|++++++.++++++++|++++|+||||.+++.+++.++|+. |+++|+||+
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 107 GIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred CchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence 885 33667778999999999877778999999999985489999999999999999999999999987 999999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-------------------------
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------------------------- 310 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~------------------------- 310 (422)
|....... .....+.++++.|+||.++ ++.++||+++++++++.+.....
T Consensus 187 ~~~g~~~~----~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
T 3kgw_A 187 ASLGGVPI----YMDQQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVI 261 (393)
T ss_dssp TTTTTSCC----CTTTTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCC
T ss_pred ccccCccc----chhhcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCC
Confidence 87432111 1123345688899999764 33448999999999998875332
Q ss_pred CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594 311 PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 311 ~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
.++.+...+.++.++++. .++++ .+++++++++++.+.|++++.....+.. +.++++.++++.+.+++.+.|.
T Consensus 262 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (393)
T 3kgw_A 262 HHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL 341 (393)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 245677777777777663 23355 8889999999999999988532222322 4667889887788999999998
Q ss_pred hC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 384 KM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
++ ||.++++..+..++++||++ + +.++++++.++|++
T Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 383 (393)
T 3kgw_A 342 DHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALRE 383 (393)
T ss_dssp HHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHH
Confidence 76 99999987655678999998 5 45556666665554
No 103
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=2.8e-33 Score=275.72 Aligned_cols=311 Identities=13% Similarity=0.025 Sum_probs=243.4
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCCCCCEE-EeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594 104 ENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLESDHIL-VGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~~~~i~-~~~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (422)
..|.+.++.+.+++.+... ..|+. ....+++++++++++.++++++ +++|+++++..++++++++||+|+++.|+
T Consensus 17 p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~ 95 (416)
T 3isl_A 17 PGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYG 95 (416)
T ss_dssp SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred CCCcCcCHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 4567778999998877432 22321 2367899999999999877665 88999999999999999999999999999
Q ss_pred chh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594 180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay 256 (422)
|+. +...++..|++++.++.+.++.+|+++++++++++++++|++++|+||||.+++.+++.++++. |+++|+|++|
T Consensus 96 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 175 (416)
T 3isl_A 96 RFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVA 175 (416)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTT
T ss_pred cccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCc
Confidence 987 6677888999999999887788999999999975689999999999999999999999999987 9999999998
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---------------------------
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--------------------------- 309 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--------------------------- 309 (422)
....... .....+.++++.|++|.++ ++.++|++++++++++.+....
T Consensus 176 ~~~~~~~----~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~ 250 (416)
T 3isl_A 176 TIGGCEV----KVDEWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFD 250 (416)
T ss_dssp TTTTSCC----CTTTTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTC
T ss_pred cccCCCc----chhhcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccc
Confidence 7432211 1122345689999999643 3445899999999998876421
Q ss_pred -------------CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccCCC---ceEEEEEeC
Q 014594 310 -------------QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYPSY---SNFILCEVT 370 (422)
Q Consensus 310 -------------~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~~f~~~~~~ 370 (422)
..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++.....+.. +.++++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 330 (416)
T 3isl_A 251 LSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIP 330 (416)
T ss_dssp HHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECC
T ss_pred hHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCC
Confidence 12356777777777777642 33 55 8889999999999999987533233322 578889998
Q ss_pred CCCCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe---cChhh-HHHHHHHHhh
Q 014594 371 SGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV---GKPEH-TDALMECLMH 420 (422)
Q Consensus 371 ~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~---~~~~~-~~~l~~al~~ 420 (422)
++.+.+++.+.|.++ ||.++++..+..++++||++ .+.++ ++++.++|++
T Consensus 331 ~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 385 (416)
T 3isl_A 331 GGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEA 385 (416)
T ss_dssp TTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence 778899999999865 99999887655678999999 45555 6666666654
No 104
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.6e-33 Score=273.71 Aligned_cols=311 Identities=16% Similarity=0.111 Sum_probs=231.9
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc----------chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 98 VKIDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~----------~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+.|+.+.+ .++++.+.+++.+ +.....+|.. ...++++++++++++++++|++|+|+++++..+++++
T Consensus 2 iyld~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 2 AYFDYTSA-KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTC-CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred EeecCCCc-CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence 45555544 3567888888876 2221222221 2348999999999998889999999999999999988
Q ss_pred c----CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
+ ++||+|+++.++|+.+...+.. .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+++.++
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~ 159 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE 159 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-cCceEEEEECCCCCceeeCCHHH
Confidence 7 9999999999999987665444 69999999987788899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------c
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K 309 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------~ 309 (422)
+.++++. |+ +|+|++|........ ....+.++++.|+||.+|.+| +|+++++++. .+... .
T Consensus 160 i~~l~~~~~~-li~D~a~~~~~~~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~ 230 (382)
T 4hvk_A 160 ISEVLAGKAA-LHIDATASVGQIEVD----VEKIGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL 230 (382)
T ss_dssp HHHHHSSSSE-EEEECTTTBTTBCCC----HHHHTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred HHHHHHHcCE-EEEEhHHhcCCCCCC----chhcCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence 9999998 99 999999874321111 112244589999999877555 7777776543 11111 1
Q ss_pred CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594 310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
..++.+...+.++.++++. .++++ .+++++++++++.+.|++++.+.+.+.. .+++++.++ +.+.+++.+.|.
T Consensus 231 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 309 (382)
T 4hvk_A 231 RSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLD 309 (382)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TCCHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-CCCHHHHHHHHH
Confidence 1344566777766666653 24556 8889999999999999988666544332 357788886 568899999999
Q ss_pred hCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++||.++++..+.. ++++||+++ +.++++++.++|++
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~ 368 (382)
T 4hvk_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 99999998754211 589999998 55666777666654
No 105
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.5e-33 Score=273.73 Aligned_cols=305 Identities=16% Similarity=0.119 Sum_probs=229.2
Q ss_pred EEcCCCCCCCCCCHHHHH----HHh---cCCCCCCCCCcc---hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594 98 VKIDANENPYGPPPEVRE----ALG---QLKFPYIYPDPE---SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~----al~---~~~~~~~y~~~~---~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~ 167 (422)
..++.+++++.+++.+.+ ++. .-...+.|+..+ ..++++++++++|.+ ++++++|+++++..++++++
T Consensus 21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~ 98 (404)
T 1e5e_A 21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL 98 (404)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh
Confidence 456777888876654433 332 112235575544 348999999999974 78888888999999999999
Q ss_pred CCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 168 DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
++||+|+++.|+|+.+.. .++..|++++.++.+ |++++++.++ +++++|++++|+||||.+++.+++.++
T Consensus 99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~t~~v~l~~p~NptG~v~~l~~i~~l 172 (404)
T 1e5e_A 99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKD 172 (404)
T ss_dssp CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-CCCcEEEEECCCCCCCcccCHHHHHHH
Confidence 999999999999998877 677899999999864 7899999997 689999999999999999999999999
Q ss_pred HcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccc-eeeecCHHHHH-HHHHhcCCC---CCcH
Q 014594 244 LEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQPY---NVSV 316 (422)
Q Consensus 244 ~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~~~---~~~~ 316 (422)
++. |+++|+||+|.++.+.. .. ..++++++.|+||.++++|+|+ ||+++++++++ .+......+ +.++
T Consensus 173 a~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~ 247 (404)
T 1e5e_A 173 AHSQEGVLVIADNTFCSPMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISP 247 (404)
T ss_dssp HHTSTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred HHhhcCCEEEEECCCchhhhCC-cc----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence 975 89999999999877532 21 2367799999999999999998 99999999988 787766554 5788
Q ss_pred HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC--------------ccc----CCCceEEEEEeCCCCCHHHH
Q 014594 317 AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL--------------NPY----PSYSNFILCEVTSGMDAKKL 378 (422)
Q Consensus 317 ~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~----p~~~~f~~~~~~~~~~~~~~ 378 (422)
+.+.++.++|+... ...++..++.+.+.+.|++.+.+ .+. ...++|+.+++++ ..+.+
T Consensus 248 ~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 323 (404)
T 1e5e_A 248 HDAWLITRGLSTLN--IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEGA 323 (404)
T ss_dssp HHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHHH
T ss_pred HHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHHH
Confidence 89998888887521 14555566677777777655311 111 1136676668863 13455
Q ss_pred HHHHHhCCcEEEeCCC-------------------------CCC-CCeEEEEecChhhHHHHHHHHhh
Q 014594 379 KDDLAKMGVMIRHYNN-------------------------KEL-KGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~~-------------------------~~~-~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+.|.+.||.+...+. .+. ++++|||++. ++++++.+.|++
T Consensus 324 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-e~~~~li~~l~~ 390 (404)
T 1e5e_A 324 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-EDADELIADFKQ 390 (404)
T ss_dssp HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHHH
T ss_pred HHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-CCHHHHHHHHHH
Confidence 5666688995553210 011 5899999998 667888877765
No 106
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.5e-33 Score=276.87 Aligned_cols=317 Identities=15% Similarity=0.103 Sum_probs=242.9
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-----------chHHHHHHHHHHcCCCCCCEEEeCCHHHH
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-----------ESRRLRAALAKDSGLESDHILVGCGADEL 158 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-----------~~~~lr~~la~~~~~~~~~i~~~~G~~~a 158 (422)
++.+.+.|+.+.+. ++++++.+++.+. . ..+.+|.. ...++++++++++++++++|++|+|++++
T Consensus 19 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a 97 (423)
T 3lvm_A 19 AMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATES 97 (423)
T ss_dssp -CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHH
T ss_pred ccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHH
Confidence 45678999988776 6789999999873 3 22222221 23689999999999988999999999999
Q ss_pred HHHHHHHhcC----CCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594 159 IDLIMRCVLD----PGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (422)
Q Consensus 159 l~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (422)
+.++++++++ +||+|+++.|+|+.+...+ ...|++++.++.+.++.+|+++++++++ +++++|++++|+|||
T Consensus 98 ~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~npt 176 (423)
T 3lvm_A 98 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEI 176 (423)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTT
T ss_pred HHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC-CCcEEEEEeCCCCCC
Confidence 9999998874 7999999999999887666 4469999999988888899999999997 689999999999999
Q ss_pred CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-
Q 014594 232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK- 309 (422)
Q Consensus 232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~- 309 (422)
|.+++.++|.++|+. |+++|+||+|...... ......+.++++.|+||.+|.+| +||++++++..+.+....
T Consensus 177 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~ 250 (423)
T 3lvm_A 177 GVVQDIAAIGEMCRARGIIYHVDATQSVGKLP----IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMH 250 (423)
T ss_dssp CBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC----CCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSC
T ss_pred ccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC----cChhhcCCCEEEechHHhcCCCC--eEEEEEeccccCCCCcccc
Confidence 999999999999987 9999999998753221 11223345689999999887666 899999887666554332
Q ss_pred --------CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCH
Q 014594 310 --------QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDA 375 (422)
Q Consensus 310 --------~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~ 375 (422)
..++.+...+.++.++++. .++++ .+++++++++++.+.|++++.+.+.+.. +.++++.++ +.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 329 (423)
T 3lvm_A 251 GGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEG 329 (423)
T ss_dssp SSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET-TSCH
T ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC-CCCH
Confidence 2345677777777666654 23456 8889999999999999988656544333 356777775 6688
Q ss_pred HHHHHHHHhCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.++.+.|.+ |.++++..+.. .+++||+++ +.++++++.++|++
T Consensus 330 ~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 394 (423)
T 3lvm_A 330 ESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK 394 (423)
T ss_dssp HHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 889888866 88877653211 489999998 55666666666654
No 107
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.5e-33 Score=279.23 Aligned_cols=317 Identities=15% Similarity=0.089 Sum_probs=243.8
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CCCCCC--------CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIYP--------DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~y~--------~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
++.++|||+.|.+ .+.++|++.+++.+ +. ++..|+ .....++++++++++|.+ +.++++++++++..
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 139 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG 139 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence 4567899999974 33578889888765 21 111111 234689999999999974 55666666779999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCccCcCCCHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~e 238 (422)
++++++++||.|+++.|+|..+...++..|++++.++ ..|++.|++.+++. ++++|++++++||||.+++.+
T Consensus 140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~ 214 (427)
T 2w8t_A 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFR-----HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK 214 (427)
T ss_dssp HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEEC-----TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeC-----CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 9999999999999999999999999999999999987 36899999999742 789999999999999999999
Q ss_pred HHHHHHcC-CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594 239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (422)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---- 309 (422)
+|.++++. |+++|+||+|..+..+. ......+ ..+.++++.||||.+|++| ||+++++++++.+....
T Consensus 215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~ 291 (427)
T 2w8t_A 215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYI 291 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHH
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhccccc
Confidence 99999987 99999999999876432 2222222 2345799999999998766 99999998888775442
Q ss_pred CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC-CceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 310 QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PS-YSNFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 310 ~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~~~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
..++.++..+.++.++|+..+..+ .+++++++++++.+.|++++ +.+. +. .++++|+.+++..+..++.+.|.++|
T Consensus 292 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 370 (427)
T 2w8t_A 292 FTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG-FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGG 370 (427)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT-CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence 234677777777777776533334 88899999999999998875 3433 55 77899999975445788999999999
Q ss_pred cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.+.++..+. ..+++||+++ +.++++++.++|++
T Consensus 371 i~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~ 410 (427)
T 2w8t_A 371 LYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA 410 (427)
T ss_dssp EECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999876532 3469999998 45556666665543
No 108
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.2e-33 Score=273.20 Aligned_cols=313 Identities=16% Similarity=0.118 Sum_probs=235.2
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc-CCC--C--C-CCCC-----cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 98 VKIDANENPYGPPPEVREALGQ-LKF--P--Y-IYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~~--~--~-~y~~-----~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
+.|+.+.+. ++++.+++++.+ +.. . . .|+. ....++|+++++++|+++++|++|+|+++++.++++++
T Consensus 2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence 456665554 578899988876 221 1 1 1421 23678999999999998889999999999999999998
Q ss_pred c----CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
. ++||+|+++.|+|+.+...+.. .|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~ 159 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE 159 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-CCCeEEEEeccCCCccccCCHHH
Confidence 7 8999999999999987666543 69999999987777899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHH------HhcCC
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP 311 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~------~~~~~ 311 (422)
+.++++. |++ |+||+|.... .+.. +...+.++++.|+||.+|.+| +||++++++. +.... .....
T Consensus 160 i~~l~~~~~~~-i~D~a~~~g~-~~~~---~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~ 232 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASVGQ-IEVD---VEKIGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRS 232 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTBTT-BCCC---HHHHTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSC
T ss_pred HHHHHHHCCCE-EEEcchhcCC-cccC---ccccCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccC
Confidence 9999998 999 9999998321 1111 112245688999999877656 7999987763 21110 11123
Q ss_pred CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHHhC
Q 014594 312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM 385 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~~~ 385 (422)
++.+...+.++.++++. .++++ ++++++++++++.+.|++++.+.+.++. ++++++.++ +.+.+++.+.|.++
T Consensus 233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 311 (382)
T 4eb5_A 233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLDMA 311 (382)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TSCHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC-CcCHHHHHHHHHHC
Confidence 45666666666666653 23455 8889999999999999988555543332 568888887 56889999999999
Q ss_pred CcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 386 GVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 386 gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
||.++++..+ + .++++||+++ +.++++++.++|+.
T Consensus 312 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (382)
T 4eb5_A 312 GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 9999987531 1 2579999998 45666666666554
No 109
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=5e-34 Score=277.44 Aligned_cols=308 Identities=13% Similarity=0.155 Sum_probs=234.0
Q ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 93 KPEDIVKIDANE--NPYG-PPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~----~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
.+..++||+.+. ++++ +++.+.+++.+. . ....|+.++..++++++++++|+ +++|++++|+++++..+++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~ 104 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK 104 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHH
Confidence 456789998875 5777 889998888752 1 12467777788999999999998 4899999999999999987
Q ss_pred H---hc---CCC-CEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 165 C---VL---DPG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 165 ~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
. ++ ++| |+|++++|+|+.+...+...+.. +..++. .|+++++++++ +++++|++
T Consensus 105 ~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~ 178 (375)
T 2eh6_A 105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD-EETAGIII 178 (375)
T ss_dssp HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC-TTEEEEEE
T ss_pred HHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc-CCeEEEEE
Confidence 5 35 788 99999999998776555443322 333331 58999999997 68999999
Q ss_pred eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
++|+||||.+.+ .+++.++++. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||+++
T Consensus 179 ~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~ 254 (375)
T 2eh6_A 179 EVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILA 254 (375)
T ss_dssp CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred eCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE---EEccccc-CCCCeEEEEE
Confidence 999999999976 5666666665 9999999999987643321 22222223433 7889998 7999999999
Q ss_pred CHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594 298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 375 (422)
Q Consensus 298 ~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~ 375 (422)
++++++.+.. ....++.+++.+.++.++|+..+ +..++++++++++.+.|++++. ...++.++|+|++++. +.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~~~~~~--~~ 329 (375)
T 2eh6_A 255 REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKELGK-GKVKGRGLMLGLELER--EC 329 (375)
T ss_dssp EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTS-SEEEEETTEEEEECSS--CC
T ss_pred cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEEEEEEcC--cH
Confidence 9988877655 33456778888888888886533 4677888899999999988764 3345678999999973 56
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.++.+.|.++||.++++. ++++||+++ +.++++++.++|++
T Consensus 330 ~~~~~~l~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 330 KDYVLKALEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp HHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 789999999999999864 589999965 45555666665554
No 110
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.1e-33 Score=277.63 Aligned_cols=317 Identities=18% Similarity=0.127 Sum_probs=239.2
Q ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHhcC----CC-----CCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANEN-PYGPPPEVREALGQL----KF-----PYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~-----~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+++++++..+++ +++++|++.+++.+. .. ...|+.. +..++|++++++++. +++|++++|++ ++..+
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~ 122 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDAT 122 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHH
Confidence 355788888776 666788888888652 11 1234443 678999999999996 57888888877 77777
Q ss_pred HHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (422)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (422)
+..++ .+||.|+++.|+|+.+...++..|++++.++.+ |++.+++.+++ +++++|++++|+||||.+++.
T Consensus 123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l 197 (401)
T 2bwn_A 123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI 197 (401)
T ss_dssp HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence 66553 589999999999999988888899999999853 78899888863 478999999999999999999
Q ss_pred HHHHHHHcC-CCeEEEccCCccccCC--Cc-hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594 238 EDLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (422)
Q Consensus 238 e~l~~i~~~-~~~li~Deay~~~~~~--~~-~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~- 311 (422)
+++.++|+. |+++|+||+|..+.++ +. .....+. .+.+++++||||.++++| ||+++++++++.+......
T Consensus 198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~ 274 (401)
T 2bwn_A 198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF 274 (401)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCc
Confidence 999999987 9999999999954322 21 1211111 123688999999999888 9999999998887654322
Q ss_pred ---CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014594 312 ---YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K 384 (422)
Q Consensus 312 ---~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~ 384 (422)
.+.+++.+.++.++++..+ ..+ .+++++++++++.+.|++++ +.+.++.++++|++++++.+..++.+.|. +
T Consensus 275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 353 (401)
T 2bwn_A 275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSD 353 (401)
T ss_dssp HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCeEEEEeCChHHHHHHHHHHHhc
Confidence 2345577777777775422 234 88889999999999998874 44445556799999975456778999996 8
Q ss_pred CCcEEEeCCCCCC---CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 385 MGVMIRHYNNKEL---KGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 385 ~gI~v~~~~~~~~---~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+||.++++..++. .+++||+++ +.++++++.++|+++
T Consensus 354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 8999998765432 369999998 566677777766643
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=9.9e-33 Score=269.57 Aligned_cols=306 Identities=19% Similarity=0.134 Sum_probs=234.8
Q ss_pred CCCCHHHHHHHhc-CCCCCCCCC--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC----------
Q 014594 107 YGPPPEVREALGQ-LKFPYIYPD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP---------- 169 (422)
Q Consensus 107 ~~~~~~v~~al~~-~~~~~~y~~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~---------- 169 (422)
.+++|++.+++.+ +......+. ++ ..++++++++++++++++|++|+|+++++..++++++.+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~ 119 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS 119 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence 3456788888876 332111111 11 346889999999999999999999999999999988776
Q ss_pred ---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 170 ---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 170 ---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
||+|+++.|+|..+...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+.+.+++.++|+.
T Consensus 120 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 199 (397)
T 3f9t_A 120 KNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKE 199 (397)
T ss_dssp CCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred CCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999888888999999999984489999999999999999999999999998
Q ss_pred -CCeEEEccCCccccCC--Cc--------hhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCC---
Q 014594 247 -PILVVLDEAYTEFSGL--ES--------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQP--- 311 (422)
Q Consensus 247 -~~~li~Deay~~~~~~--~~--------~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~--- 311 (422)
|+++|+||+|..+... +. ....... +..+++.|++|.++ +|.|+|+++++++ +.+.+......
T Consensus 200 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 277 (397)
T 3f9t_A 200 NNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTE 277 (397)
T ss_dssp HTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSS
T ss_pred hCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccC
Confidence 9999999999865421 10 0111122 45688999999654 7889999988654 44433221111
Q ss_pred ----------CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594 312 ----------YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 381 (422)
Q Consensus 312 ----------~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~ 381 (422)
...+...+.++...+....+.+..++++++++++.+.|++++...+.++.+++++++++ +..++.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~ 354 (397)
T 3f9t_A 278 TRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDE---DYKEVCKK 354 (397)
T ss_dssp SEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECT---THHHHHHH
T ss_pred CCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeC---CHHHHHHH
Confidence 11255667777776654333338888889999999999988644456778889999886 37889999
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 382 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 382 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++||.++++.. ++++||+++ +.++++++.++|++
T Consensus 355 l~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~ 393 (397)
T 3f9t_A 355 LRDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNS 393 (397)
T ss_dssp HHHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999998763 589999998 55666666666654
No 112
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=3e-33 Score=269.08 Aligned_cols=311 Identities=17% Similarity=0.189 Sum_probs=224.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcCC-CCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQLK-FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~-~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd 171 (422)
+.++|+|+.+++++ +++.+++++.+.. ....| ++++..+||+++++++|. +++++++|+++++.+++++++++||
T Consensus 2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~gt~a~~~~~~~~~~~gd 78 (347)
T 1jg8_A 2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGK--EAALFVPSGTMGNQVSIMAHTQRGD 78 (347)
T ss_dssp ---CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHCCTTC
T ss_pred CceEEEeccccCCC-CCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCC--ceEEEecCcHHHHHHHHHHhcCCCC
Confidence 35679999999998 6788999997642 22245 677889999999999996 3678888889999999999999999
Q ss_pred EEEEcCCCchh-HH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc-CcCCCHHHHHH
Q 014594 172 KIVDCPPTFTM-YE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLK 242 (422)
Q Consensus 172 ~Vl~~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~e~l~~ 242 (422)
+|+++.|+|.. +. ..++..|++++.+ .++++.+|++++++++++ .++++|++++||||| |.+++.+++++
T Consensus 79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~ 157 (347)
T 1jg8_A 79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE 157 (347)
T ss_dssp EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence 99999999964 32 2566789999998 545566899999999974 268999999999999 99999987776
Q ss_pred HHcC----CCeEEEccCCcccc--C-CCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcCC---
Q 014594 243 ILEM----PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP--- 311 (422)
Q Consensus 243 i~~~----~~~li~Deay~~~~--~-~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~~--- 311 (422)
|++. |+++|+||+|..+. . +..........+ .++.|+||.++++ +| |+++++++++.+...+..
T Consensus 158 i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~ 232 (347)
T 1jg8_A 158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGG 232 (347)
T ss_dssp HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc--EEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCC
Confidence 6553 99999999985321 1 112222222233 3344899988743 67 566799888877654332
Q ss_pred -CCCcHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014594 312 -YNVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGV 387 (422)
Q Consensus 312 -~~~~~~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI 387 (422)
...+...+.++..+|+.. +. +. +..++++++.+.|++++... ..+..++|+|++++. +.+..++.+.|.++||
T Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 309 (347)
T 1jg8_A 233 GMRQAGVLAAAGIIALTKMVDR--LK-EDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGV 309 (347)
T ss_dssp CCSSTHHHHHHHHHHHHHSSTT--HH-HHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTE
T ss_pred chhHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCC
Confidence 234555556566666431 22 22 23356677888887764321 245678899999974 5678999999999999
Q ss_pred EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 388 MIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 388 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.+++++ .+++||++. +.++++++.++|++
T Consensus 310 ~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~ 341 (347)
T 1jg8_A 310 LANAVS----DTEIRLVTHKDVSRNDIEEALNIFEK 341 (347)
T ss_dssp ECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999864 478999986 56666666666654
No 113
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=7.9e-33 Score=268.99 Aligned_cols=311 Identities=11% Similarity=0.062 Sum_probs=231.2
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-C-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (422)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~-i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (422)
+..|.++++++++++.+....+.++.. ...++++++++++|++++ + +++++|++++++.++++++++||+|+++.|
T Consensus 24 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~ 103 (376)
T 3f0h_A 24 TVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDG 103 (376)
T ss_dssp SSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEES
T ss_pred cCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeC
Confidence 446777889999999874332444432 256789999999998653 4 555999999999999999999999999998
Q ss_pred CchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 179 TFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 179 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
.|.... ..+...|++++.++.+.++.+|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 104 GSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred ChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence 776543 3466789999999987788999999999876 789999999999999999999999999987 999999999
Q ss_pred CccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhc-------------------CCCCCc
Q 014594 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAK-------------------QPYNVS 315 (422)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~-------------------~~~~~~ 315 (422)
|..+..... ....+.++++.|+||.++ .+| +|++++++++++.+.... .+++.+
T Consensus 183 ~~~~~~~~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (376)
T 3f0h_A 183 SAFLADPFN----MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA 256 (376)
T ss_dssp TTTTTSCCC----HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred ccccCcccc----ccccCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCc
Confidence 986543211 112234588999999987 555 788999999998886422 134555
Q ss_pred HHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014594 316 VAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIR 390 (422)
Q Consensus 316 ~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~ 390 (422)
...+.++.++++ +.+.++ .+++++++++++.+.|++++.....+...++++...+.+.+.+++.+.|.++ ||.++
T Consensus 257 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 336 (376)
T 3f0h_A 257 VGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWIC 336 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECE
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEe
Confidence 544344444443 332456 8888999999999999988632222223333332224467899999999976 99999
Q ss_pred eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 391 HYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 391 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++.....++++||++. +.++++++.++|++
T Consensus 337 ~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~ 369 (376)
T 3f0h_A 337 PNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKD 369 (376)
T ss_dssp ECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred cCccccCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8864445789999985 45556666666554
No 114
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=7e-33 Score=271.13 Aligned_cols=311 Identities=15% Similarity=0.200 Sum_probs=235.9
Q ss_pred CCCCCCeEEcCCCCCCCC---CCHHHHHHHhc-CCC-C---CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENPYG---PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~-~---~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+..+++++|+..+.++.. .+|++.+++.+ +.. . ..|+.+...++++++++++| ++++++++|++++++.+
T Consensus 32 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~a 109 (392)
T 3ruy_A 32 DPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETA 109 (392)
T ss_dssp CTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred eCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHH
Confidence 345678899998765544 57999988876 221 1 22445567899999999998 67999999999999999
Q ss_pred HHHhcCC----------CCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594 163 MRCVLDP----------GDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKP 219 (422)
Q Consensus 163 ~~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (422)
++.+..+ +|+|++..|+|+.+...+...+. .+..++. .|+++++++++ +++
T Consensus 110 l~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~ 183 (392)
T 3ruy_A 110 IKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAIT-PNT 183 (392)
T ss_dssp HHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCC-TTE
T ss_pred HHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhc-cCe
Confidence 9977644 68999999999766555444322 2444442 28999999997 789
Q ss_pred eEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-cc
Q 014594 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LR 291 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r 291 (422)
++|++++|+||||.+++ .+++.++|+. |+++|+||+|.+|...+... ...+...+++ ||||.++ +| +|
T Consensus 184 ~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---~~SK~l~-gG~~~ 259 (392)
T 3ruy_A 184 AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY---ILGKALG-GGVFP 259 (392)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTTSC
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE---EEchhhh-CChhh
Confidence 99999999999999998 8888888887 99999999998876543322 2222223433 6789865 46 99
Q ss_pred ceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC--CcccCCCceEEE
Q 014594 292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF--LNPYPSYSNFIL 366 (422)
Q Consensus 292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~ 366 (422)
+||+++++++++.+..... .++.+++.+.++.++|+..+. + .+++++++++++.+.|++++. +...++.++|++
T Consensus 260 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 338 (392)
T 3ruy_A 260 ISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIG 338 (392)
T ss_dssp CEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEE
T ss_pred hEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEE
Confidence 9999999999887765443 478899999999999875433 4 888999999999999998742 333455678888
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+++ +..++.+.|.++||.++++. ++++||+++ +.++++++.++|++
T Consensus 339 ~~~~~--~~~~l~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 389 (392)
T 3ruy_A 339 IELNE--PARPYCEQLKAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKA 389 (392)
T ss_dssp EEESS--CSHHHHHHHHTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEcc--hHHHHHHHHHHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 88874 77899999999999999875 689999944 45555666655554
No 115
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=3.8e-32 Score=267.55 Aligned_cols=316 Identities=14% Similarity=0.102 Sum_probs=239.5
Q ss_pred CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CC---CCC----CC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP---YIY----PD-PESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~---~~y----~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
++++++||+.+.. .++++|++.+++.+ +. ++ ..| +. ....+++++++++++.+ ..++++++++++..
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~ 134 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFD--ECLLSQSGWNANVG 134 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCC--eEEEecchHHHHHH
Confidence 4678999988742 35568999888865 22 11 111 11 23568999999999975 34555666799999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++++++||.|+++.|+|..+...++..|++++.++. .|++++++.+++.++++|++++|+||||.+++.+++.
T Consensus 135 ~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~ 209 (409)
T 3kki_A 135 LLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELV 209 (409)
T ss_dssp HHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHH
Confidence 99999999999999999999999888999999998873 6899999999765689999999999999999999999
Q ss_pred HHHcC-CCeEEEccCCccccCCC---chhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----C
Q 014594 242 KILEM-PILVVLDEAYTEFSGLE---SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y 312 (422)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~ 312 (422)
++|+. |+++|+||+|.++..+. ......+. .+.++++.||||.++++ .||+++++++++.+.....+ .
T Consensus 210 ~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~ 286 (409)
T 3kki_A 210 NISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSS 286 (409)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSB
T ss_pred HHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccC
Confidence 99998 99999999998844322 11122211 23458899999999865 49999999888877654332 2
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 391 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~ 391 (422)
+.++..+.++.++++..+..+ .+++++++++++.+.|+++++ .+. +.++++|+.++...+..++.+.|.++||.+.+
T Consensus 287 ~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~ 364 (409)
T 3kki_A 287 TLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGL-TIR-SESQIIGLETGDERNTEKVRDYLESNGVFGSV 364 (409)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-CSSSEEEEEEESHHHHHHHHHHHHHTTEECEE
T ss_pred CCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence 456777777777776533224 888899999999999999864 333 57889999987544567899999999999987
Q ss_pred CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 392 YNN---KELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 392 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.. ....+++||+++ +.++++++.++|++
T Consensus 365 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 399 (409)
T 3kki_A 365 FCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSD 399 (409)
T ss_dssp ECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred eCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence 554 234679999997 44555555555543
No 116
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=6.8e-33 Score=274.72 Aligned_cols=324 Identities=14% Similarity=0.100 Sum_probs=214.0
Q ss_pred CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~-~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.++++++|+..+ .++++. +|++.+++.+ +. .. ..|+++...+++++++++++.+.++|++|+|++++++.+
T Consensus 26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a 105 (430)
T 3i4j_A 26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESA 105 (430)
T ss_dssp TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHH
Confidence 356778999887 667764 8899888765 22 11 234555567899999999998889999999999999999
Q ss_pred HHHhc--------CCCCEEEEcCCCchhHHHHHHHcCC---------------EEEEecCCCCC---CCCHHHHHHHhhc
Q 014594 163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGA---------------AVVKVPRKSDF---SLNVELIADAVER 216 (422)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~~---~~d~~~l~~~i~~ 216 (422)
++.++ .++|.|++..|+|+.+...+...+. .+..++.++.+ ..|+++|++.+++
T Consensus 106 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 185 (430)
T 3i4j_A 106 VKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER 185 (430)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh
Confidence 99876 3478999999999987765544333 22223322211 1366889988863
Q ss_pred ---CCCeEEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhh
Q 014594 217 ---EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKR 284 (422)
Q Consensus 217 ---~~~~~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~ 284 (422)
.++++|+++.++| ++|...+ .+++.++|+. |+++|+||+|.+|...+.. .... +...++ .+|||.
T Consensus 186 ~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di---~t~sK~ 262 (430)
T 3i4j_A 186 EGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDI---AVLGKG 262 (430)
T ss_dssp HCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSE---EEECGG
T ss_pred cCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcE---EEEccc
Confidence 3456666666677 8998665 5666666766 9999999999988654322 1222 222333 368999
Q ss_pred hcccc-ccceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 285 AGLAG-LRVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 285 ~~~~G-~r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
++ +| +|+||+++++++++.+... ..+|+.+++++.++.++|+. +++.+ .++..+..++.+.+.+++++
T Consensus 263 l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (430)
T 3i4j_A 263 LA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP 341 (430)
T ss_dssp GT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 59 9999999999999999863 34578899999999999873 34444 55555555555555555566
Q ss_pred CCcccCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHH
Q 014594 354 FLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECL 418 (422)
Q Consensus 354 ~~~~~p~~~~f~~~~~~~~---------~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al 418 (422)
.+...++.|+|+++++++. ....++.+.|+++||.++++.. ...++++||+++ +.++++++.++|
T Consensus 342 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l 421 (430)
T 3i4j_A 342 QMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALL 421 (430)
T ss_dssp TEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHH
T ss_pred CeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 5555567788999988521 1236789999999999998732 223679999976 344444444444
Q ss_pred h
Q 014594 419 M 419 (422)
Q Consensus 419 ~ 419 (422)
+
T Consensus 422 ~ 422 (430)
T 3i4j_A 422 A 422 (430)
T ss_dssp H
T ss_pred H
Confidence 3
No 117
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=3.7e-32 Score=269.33 Aligned_cols=320 Identities=13% Similarity=0.137 Sum_probs=227.8
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+..++|+..+. ++++ .+|++.+++.+ +. .. .+|+.+...++++++++++++++++|++|+|++++++.+
T Consensus 40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a 119 (429)
T 1s0a_A 40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA 119 (429)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence 3456789998886 5665 57999988875 22 11 245555567899999999998889999999999999999
Q ss_pred HHHhc---C----CCCEEEEcCCCchhHHHHHHH-c---------------CCEEEEecCC---CCC-CCCHHHHHHHhh
Q 014594 163 MRCVL---D----PGDKIVDCPPTFTMYEFDAAV-N---------------GAAVVKVPRK---SDF-SLNVELIADAVE 215 (422)
Q Consensus 163 ~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~-~---------------g~~~~~v~~~---~~~-~~d~~~l~~~i~ 215 (422)
++.+. + |||+|++..|+|+.+...+.. . +...+.++.. ..+ .+|++++++.++
T Consensus 120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (429)
T 1s0a_A 120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA 199 (429)
T ss_dssp HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence 98653 2 689999999999865443322 1 2344444321 133 489999999986
Q ss_pred c--CCCeEEEEeCC-CCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhh
Q 014594 216 R--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRA 285 (422)
Q Consensus 216 ~--~~~~~i~l~~p-~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~ 285 (422)
+ +++++|+++.+ +||||.+.+ .+++.++++. |+++|+||+|.+|...+. .........+++ ||||.+
T Consensus 200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~---t~sK~l 276 (429)
T 1s0a_A 200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKAL 276 (429)
T ss_dssp HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGG
T ss_pred hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE---Eecccc
Confidence 4 45666665544 699997665 5555566665 999999999998764332 122222233433 789999
Q ss_pred cccc-ccceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CC
Q 014594 286 GLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PF 354 (422)
Q Consensus 286 ~~~G-~r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~ 354 (422)
+ +| +|+||+++++++++.+... ..+++.|++++.++.++|+..+-.+..++++++++++.+.|+++ +.
T Consensus 277 ~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 355 (429)
T 1s0a_A 277 T-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEM 355 (429)
T ss_dssp G-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTT
T ss_pred c-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8 68 9999999999999888763 23577899999998888863111125667778889999988875 33
Q ss_pred CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 355 LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 355 ~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+...++.++|+|+++++..+..++.+.|.++||.++++ ++++||+++ +.++++++.++|++
T Consensus 356 ~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~ 419 (429)
T 1s0a_A 356 VADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNR 419 (429)
T ss_dssp EEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 33234567899999976567889999999999999885 379999954 55566666666654
No 118
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=3.6e-33 Score=276.10 Aligned_cols=321 Identities=12% Similarity=0.099 Sum_probs=225.2
Q ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CCC-C----CCCCCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHHHHHH
Q 014594 93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDLI 162 (422)
Q Consensus 93 ~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~-~----~~y~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~al~~~ 162 (422)
.+.+++|+..+.+ +++ ++|++.+++.+ +.. . ..|+..+..+|+++|++++ +-.+++|++|+|++++++.+
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~ 118 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENA 118 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHH
Confidence 4567899987764 554 67899998876 322 1 1246677899999999999 51248999999999999999
Q ss_pred HH---HhcCCCCEEEEcCCCchhHH-HHHHHcCCE-------------EEEecCCC-----CCCCCHHHHHHHhhc----
Q 014594 163 MR---CVLDPGDKIVDCPPTFTMYE-FDAAVNGAA-------------VVKVPRKS-----DFSLNVELIADAVER---- 216 (422)
Q Consensus 163 ~~---~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~-------------~~~v~~~~-----~~~~d~~~l~~~i~~---- 216 (422)
++ .++++| .|++.+|+|+.+. ......|.+ ++.++.+. ++.+|++++++.+++
T Consensus 119 ~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (426)
T 1sff_A 119 VKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAP 197 (426)
T ss_dssp HHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCC
Confidence 88 677776 8999999997654 345555543 66677543 223689999998864
Q ss_pred CCCeEEEEe-CCCCccC-cCCCHHHHHHHH---cC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594 217 EKPKCIFLT-SPNNPDG-SIINDEDLLKIL---EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (422)
Q Consensus 217 ~~~~~i~l~-~p~NPtG-~~~~~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 290 (422)
.++++|+++ +++| || .+++.+++++|+ +. |+++|+||+|.+|...+.... .+..+..+.+.||||.++. |+
T Consensus 198 ~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~di~s~sK~~~~-Gl 274 (426)
T 1sff_A 198 EDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFA-MEQMGVAPDLTTFAKSIAG-GF 274 (426)
T ss_dssp GGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTSCCSEEEECGGGGT-SS
T ss_pred CceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhh-hhhcCCCCCEEEEcccccC-CC
Confidence 467788875 6678 99 566655555554 44 999999999998765432211 1122222334499999995 99
Q ss_pred cceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceE
Q 014594 291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNF 364 (422)
Q Consensus 291 r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f 364 (422)
|+||+++++++++.+... ...++.+++.+.++.++|+..+..+..++++++++++.+.|++ ++.+...++.++|
T Consensus 275 riG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 354 (426)
T 1sff_A 275 PLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAM 354 (426)
T ss_dssp CCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTE
T ss_pred ceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEE
Confidence 999999999988776532 2346789999999988775321101556667777777777765 3332223345899
Q ss_pred EEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 365 ILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 365 ~~~~~~--------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+|++++ .+.+..++.+.|.++||.++++.. .++++||+++ +.++++++.++|+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~ 418 (426)
T 1sff_A 355 IAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIIS 418 (426)
T ss_dssp EEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 999984 223567889999999999999864 3689999986 4555555555544
No 119
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.3e-32 Score=271.78 Aligned_cols=314 Identities=15% Similarity=0.159 Sum_probs=222.5
Q ss_pred CCCCCeEEcCCCC--CCCCC--CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYGP--PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~~--~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
..+..++|+..+. ++++. +|++.+++.+ +... ..|+.+...+++++++++++++ +++|++|+|++++++
T Consensus 39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~ 118 (419)
T 2eo5_A 39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIE 118 (419)
T ss_dssp TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHH
Confidence 3456789998887 56755 6999998876 3221 2366655788999999999987 789999999999999
Q ss_pred HHHHHhcC-CCCEEEEcCCCchhHHHHHH-HcC-------------CEEEEecCCCCCC----------------CCHHH
Q 014594 161 LIMRCVLD-PGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS----------------LNVEL 209 (422)
Q Consensus 161 ~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~----------------~d~~~ 209 (422)
.+++.+.. +||+|++..|+|+.+...+. ..| ..++.++.++++. +|+++
T Consensus 119 ~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 198 (419)
T 2eo5_A 119 ASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEF 198 (419)
T ss_dssp HHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHH
Confidence 99987644 48999999999975443322 222 2567777544432 36889
Q ss_pred HH-HHhhc----CCCeEEEEeCCCCccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEE
Q 014594 210 IA-DAVER----EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIV 277 (422)
Q Consensus 210 l~-~~i~~----~~~~~i~l~~p~NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~ 277 (422)
|+ +.+++ +++++|+++..|||||... + .+++.++++. |+++|+||+|.+|...+. ........++++
T Consensus 199 l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~- 277 (419)
T 2eo5_A 199 IEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI- 277 (419)
T ss_dssp HHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE-
T ss_pred HHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE-
Confidence 99 88864 3455555443356789755 4 5555555555 999999999998864332 122223334433
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL 355 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 355 (422)
||||.++ +| +|+||++++++++ .+. ....+++.|++++.++.++|+..+ +.+++++++++++.+.|+++ +
T Consensus 278 --t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~~--~~~~~~~~~~~~l~~~L~~~--~ 349 (419)
T 2eo5_A 278 --TLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDIVK--DLLPHVNEIGKIFAEELQGL--A 349 (419)
T ss_dssp --EECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTS--S
T ss_pred --Eeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHh--h
Confidence 7999999 59 9999999998877 552 233457889999999999996421 27788899999999999887 3
Q ss_pred cccCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 356 NPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 356 ~~~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
...++.++|+++++. ...+.. +.+.|.++||.++++. ++++||+++ +.++++++.++|+
T Consensus 350 ~~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~ 412 (419)
T 2eo5_A 350 DDVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILK 412 (419)
T ss_dssp SEEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred hheEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 334567889999984 212355 8888889999999875 589999865 4555555555544
No 120
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-32 Score=266.28 Aligned_cols=316 Identities=16% Similarity=0.171 Sum_probs=237.4
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----chH---HHH----HHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----ESR---RLR----AALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~~~---~lr----~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
.+++++..+++++ +|++.+++.+ +. ...+||.. |.. .++ +++++++|.++++|++++|+ +++.
T Consensus 23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt-~a~~ 99 (407)
T 2dkj_A 23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGS-QANM 99 (407)
T ss_dssp HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHH-HHHH
T ss_pred hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchH-HHHH
Confidence 3579999999998 7999999987 32 23456543 222 233 48889999876667777765 5999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhH---HHHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
.++++++++||+|+++.|+|+.+ ...++..|. ..+.++.+ +++.+|++++++.+++.++++|++++|+|| ..
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~ 177 (407)
T 2dkj_A 100 AVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RF 177 (407)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SC
T ss_pred HHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CC
Confidence 99999999999999999999876 233344455 55555533 467899999999997447999999999998 78
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP 311 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~ 311 (422)
.+.+++.++|+. |+++|+||+|.. +.+.+....... ..++++.|+||. ++|.|+||++++ +++++.+......
T Consensus 178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~--l~g~~~G~~~~~~~~~~~~l~~~~~~ 253 (407)
T 2dkj_A 178 WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT--LRGPRGGLILSNDPELGKRIDKLIFP 253 (407)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG--GCCCSCEEEEESCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc--CCCCCceEEEECCHHHHHHHHhhhcc
Confidence 899999999987 999999999987 432221111111 246889999994 468899999999 8999988776554
Q ss_pred C---CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCceEEEEEeCC-CCCHHHHHHHH
Q 014594 312 Y---NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDL 382 (422)
Q Consensus 312 ~---~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~f~~~~~~~-~~~~~~~~~~L 382 (422)
+ +.+.....++.++|+. .++++ .+++++++++++.+.|++++ +.+. ++.++|+|++++. +.+..++.+.|
T Consensus 254 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
T 2dkj_A 254 GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDNHLFLVDLRPKGLTGKEAEERL 332 (407)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCceEEEEECcccCCCHHHHHHHH
Confidence 3 3444444455666654 35666 88999999999999999885 4433 5688999999974 45788999999
Q ss_pred HhCCcEEEeCCC------CCCCCeEEEEe-------cChhhHHHHHHHHhh
Q 014594 383 AKMGVMIRHYNN------KELKGYVRVSV-------GKPEHTDALMECLMH 420 (422)
Q Consensus 383 ~~~gI~v~~~~~------~~~~~~iRis~-------~~~~~~~~l~~al~~ 420 (422)
.++||.++++.. ...++++||++ .+.++++++.++|++
T Consensus 333 ~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 333 DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 999999998763 12467999998 467777888777765
No 121
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=5.5e-32 Score=261.25 Aligned_cols=309 Identities=14% Similarity=0.062 Sum_probs=234.2
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhc-C---C--CCCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhc
Q 014594 97 IVKIDANENPYGPPPEVREALGQ-L---K--FPYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVL 167 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~---~--~~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~ 167 (422)
.+.+.. .|.+.++++++++.+ + . ..+.|+.. ...++++.+++++|.+ +++|++|+|+++++.+++++++
T Consensus 5 ~~~~~p--~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 5 KIYFTP--GPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp CEEECS--SSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred ceeccC--CCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 344443 456667778755543 1 1 22333332 2567899999999874 5789999999999999999999
Q ss_pred CCCCEEEEcCCCch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
++ +.+++..+.|. .+...++..|++++.++.++++.+|+++++ ++ +++|+|++++|+||||.+++.+++.++++.
T Consensus 83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 158 (362)
T 3ffr_A 83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-ADAEIICLTHNETSSGVSMPVEDINTFRDK 158 (362)
T ss_dssp SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-TTCCEEEEESEETTTTEECCHHHHTTSGGG
T ss_pred CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-CCccEEEEEcCCCCcceeCCHHHHHHHHHh
Confidence 88 55666666666 334466778999999998778899999998 54 789999999999999999999999999874
Q ss_pred --CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcC-------------
Q 014594 247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ------------- 310 (422)
Q Consensus 247 --~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~------------- 310 (422)
|+++|+|++|..+..... . .+.++++.|+||.++ ++| +|++++++++++.+.....
T Consensus 159 ~p~~~li~D~a~~~~~~~~~----~--~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~ 230 (362)
T 3ffr_A 159 NKDALIFVDAVSSLPYPKFD----W--TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPS 230 (362)
T ss_dssp STTSEEEEECTTTTTSSCCC----T--TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred CCCCEEEEecccccCCcccC----h--hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHH
Confidence 899999999986542211 1 114488899999998 677 6888999999888776442
Q ss_pred ----------CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-----CCceEEEEEeCCC
Q 014594 311 ----------PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSG 372 (422)
Q Consensus 311 ----------~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~f~~~~~~~~ 372 (422)
.++.+...+.++..+++. ...++ ++++++++++++.+.|++++++.+.+ ..+.++|+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~- 309 (362)
T 3ffr_A 231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM- 309 (362)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-
T ss_pred HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-
Confidence 566777777777777652 12245 88899999999999999986555443 235678888885
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+..++.+.|.++||.++++..+..++++||+++ +.++++++.++|+++
T Consensus 310 -~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 310 -LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp -CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 889999999988999998765556789999987 556777777777764
No 122
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-31 Score=255.58 Aligned_cols=312 Identities=16% Similarity=0.156 Sum_probs=230.2
Q ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594 93 KPEDIVKIDANENPYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP 169 (422)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~ 169 (422)
..+++|||+.+ ++.+++|++++++.+... ...|+ .+...++++++++++| .+++|++++|+++++..++++++++
T Consensus 5 ~~~~~id~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~~ 82 (356)
T 1v72_A 5 SRPPALGFSSD-NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTPP 82 (356)
T ss_dssp -CCCCCBCSCG-GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCCT
T ss_pred CCCceEeeccC-CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcCC
Confidence 34568999986 556788999999987422 34564 3456889999999999 5456999999999999999999999
Q ss_pred CCEEEEcCCCchhHHHH--HHHc--CCEEEEecCCCCCCCCHHHHHH-HhhcC------CCeEEEEeCCCCccCcCCCHH
Q 014594 170 GDKIVDCPPTFTMYEFD--AAVN--GAAVVKVPRKSDFSLNVELIAD-AVERE------KPKCIFLTSPNNPDGSIINDE 238 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~d~~~l~~-~i~~~------~~~~i~l~~p~NPtG~~~~~e 238 (422)
||+|+++.|+|..+... +... |++++.++.+ ++.+|++++++ ++++. ++++|++++|+| ||.+++.+
T Consensus 83 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~ 160 (356)
T 1v72_A 83 WGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLD 160 (356)
T ss_dssp TEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHH
T ss_pred CCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHH
Confidence 99999999999765444 5555 9999999874 46899999999 88641 689999999987 99999988
Q ss_pred HHHHHHcC----CCeEEEccCCccccC--CCchhhhh--hcCCcEEEEccChhhhccccccce--eeecCHHHHHHHHHh
Q 014594 239 DLLKILEM----PILVVLDEAYTEFSG--LESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVG--YGAFPLSIIEYLWRA 308 (422)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~--~~~~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G--~i~~~~~~~~~l~~~ 308 (422)
++++|++. |+++|+|++|..+.. .+...... ..... +++.|+||. + .|+| |+++++++++.+...
T Consensus 161 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~-g---~~~G~g~~~~~~~~~~~~~~~ 235 (356)
T 1v72_A 161 EIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD-ALSFGATKN-G---VLAAEAIVLFNTSLATEMSYR 235 (356)
T ss_dssp HHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC-EEEECCGGG-T---CSSCEEEEESSGGGHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC-EEEEecccC-C---CcCccEEEEECHHHHhhHHHH
Confidence 88887664 999999999975421 11111111 11222 445689996 4 3556 888899988876544
Q ss_pred cC---C-CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHH
Q 014594 309 KQ---P-YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA 383 (422)
Q Consensus 309 ~~---~-~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~ 383 (422)
.. . ...+...+.++...++++.|.+..++++++++++.+.|++++.+.+ .|..++|+|++++ .++.+.|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~l~ 310 (356)
T 1v72_A 236 RKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALL 310 (356)
T ss_dssp HHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHH
T ss_pred hhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----HHHHHHHH
Confidence 21 1 1223344445566676655555777888999999999998754543 5778899999985 37889999
Q ss_pred hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
++||.++++. ++ ++++||+++ +.++++++.++|++
T Consensus 311 ~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 311 KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 9999999876 33 789999986 45566666666654
No 123
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=3.2e-32 Score=266.68 Aligned_cols=311 Identities=17% Similarity=0.163 Sum_probs=232.3
Q ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
.+..++|++.+. ++++ ++|.+.+++.+ +. . ...|+.+...++++++++++++++++|++++|+++++..+++
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~ 122 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK 122 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence 456788998876 6776 88999888876 21 1 123566667899999999998878899999999999999998
Q ss_pred Hhc--CCCCEEEEcCCCchh-HHHHHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594 165 CVL--DPGDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (422)
++. .+||.|++.+|+|+. +.......|.+ +..++ ..|+++++++++ +++++|++++++|
T Consensus 123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~~~v~~~~~~~ 196 (395)
T 1vef_A 123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVD-EETAAVILEPVQG 196 (395)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCC-TTEEEEEECSEET
T ss_pred HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-----CCcHHHHHHHhc-cCEEEEEEeCccC
Confidence 764 578999999999964 44455556765 33333 258999999997 6889998877789
Q ss_pred ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594 230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (422)
Q Consensus 230 PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~ 302 (422)
|||.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+++ ||||.++. |+|+||++++++++
T Consensus 197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~~~~ 272 (395)
T 1vef_A 197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMREEVA 272 (395)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE---EEcccccC-CCceEEEEehHHHH
Confidence 9998876 6667777766 9999999999976543221 22222233433 78999985 99999999999887
Q ss_pred HHHHH--hcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEEEeCCCCCHHH
Q 014594 303 EYLWR--AKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTSGMDAKK 377 (422)
Q Consensus 303 ~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~~~~~~~~~~~ 377 (422)
+.+.. ....++.+++.+.++.++|+..+. + ..++++++++++.+.|++++.. ...++.++|+|++++. +..+
T Consensus 273 ~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 349 (395)
T 1vef_A 273 RSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--KAAP 349 (395)
T ss_dssp HTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--CSHH
T ss_pred hhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--hHHH
Confidence 77654 233467889999888888865332 3 7788889999999999887641 1234567899999974 3678
Q ss_pred HHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 378 LKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 378 ~~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+.|. ++||.++++. ++++||+++ +.++++++.++|++
T Consensus 350 l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (395)
T 1vef_A 350 YIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRA 392 (395)
T ss_dssp HHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 999999 9999999863 689999875 34555555555543
No 124
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=3.6e-31 Score=257.85 Aligned_cols=311 Identities=14% Similarity=0.080 Sum_probs=235.3
Q ss_pred EEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCC----CCCCEEEeCCHHHHHHHHHHHhc---C
Q 014594 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---D 168 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~----~~~~i~~~~G~~~al~~~~~~l~---~ 168 (422)
+.|.. +|.+.++++.+++.+....+++|.. ...+++++++++++. ++++|++|+|+++++..+++++. +
T Consensus 7 ~~~~p--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~ 84 (385)
T 2bkw_A 7 TLLIP--GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA 84 (385)
T ss_dssp EECSS--SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC
T ss_pred eeecC--CCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCC
Confidence 45544 4667789999999874332334433 356789999999864 46899999999999999999987 8
Q ss_pred CCCEEEEc-CCCchhH-HHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 169 PGDKIVDC-PPTFTMY-EFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 169 ~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+||+|+++ .|.|+.+ ...++..|++++.++. ++++.+|++++++++++.++++|++++|+||||.+++.+++.++++
T Consensus 85 ~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~ 164 (385)
T 2bkw_A 85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK 164 (385)
T ss_dssp SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHH
Confidence 99999877 5567655 3567778999999998 7777899999999997448999999999999999999999999998
Q ss_pred C---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHH-HHH--------------
Q 014594 246 M---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIE-YLW-------------- 306 (422)
Q Consensus 246 ~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~-~l~-------------- 306 (422)
. |+++|+||+|..... . . .+...+.++++.|+||.+ |.+| +||+++++++++ .+.
T Consensus 165 ~~~~~~~li~D~a~~~~~~-~--~-~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (385)
T 2bkw_A 165 QTSPETFFVVDAVCSIGCE-E--F-EFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSL 238 (385)
T ss_dssp HHCTTSEEEEECTTTTTTS-C--C-CTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCH
T ss_pred hhCCCCEEEEECccccCCc-c--c-cccccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecH
Confidence 5 899999999974321 1 1 122334568899999965 4566 599999998876 431
Q ss_pred --------HhcC-----CCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHH-ccCCCCccc-C-----CCce
Q 014594 307 --------RAKQ-----PYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLL-KDVPFLNPY-P-----SYSN 363 (422)
Q Consensus 307 --------~~~~-----~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L-~~~~~~~~~-p-----~~~~ 363 (422)
.... .++.+...+.++.++|+.. ++ ++ .+++++++++++.+.| ++++ +.+. + ..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~ 317 (385)
T 2bkw_A 239 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-LTSVSRYPSNMSAHG 317 (385)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-CEESSCSSSTTBCSS
T ss_pred HHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-ceecccCcccccCCc
Confidence 1111 2467777777777777542 22 45 7888999999999999 8874 4443 2 2478
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec------ChhhHHHHHHHHhh
Q 014594 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG------KPEHTDALMECLMH 420 (422)
Q Consensus 364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis-~~------~~~~~~~l~~al~~ 420 (422)
++|+++++ .+++.+.|.++||.++++..+ ..++++||+ ++ +.++++++.++|++
T Consensus 318 ~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~ 379 (385)
T 2bkw_A 318 LTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL 379 (385)
T ss_dssp CEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH
T ss_pred eEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHH
Confidence 89999873 788999999999999987652 346799999 65 55667777776654
No 125
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=4.1e-32 Score=269.09 Aligned_cols=315 Identities=19% Similarity=0.121 Sum_probs=218.1
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcc----------hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPE----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~----------~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.++|+.+.+. ++++.+++++.+ +.....||... ..++|+++++++|+++++|++|+|+++++..++
T Consensus 17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 95 (432)
T 3a9z_A 17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI 95 (432)
T ss_dssp -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence 456899998887 678999998876 32223444322 358999999999998889999999999999999
Q ss_pred HHhc--------CCCCEEEEcCCCchhH-----------------HHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcC
Q 014594 164 RCVL--------DPGDKIVDCPPTFTMY-----------------EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVERE 217 (422)
Q Consensus 164 ~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~ 217 (422)
++++ ++||+|+++.|+|..+ ...++..|++++.++.+. ++.+|+++|+++++ +
T Consensus 96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~-~ 174 (432)
T 3a9z_A 96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-P 174 (432)
T ss_dssp HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC-T
T ss_pred HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc-C
Confidence 9886 5899999999999764 344455799999999764 66799999999997 6
Q ss_pred CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C----------CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-P----------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~----------~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
++++|++++|+||||.+++.+++.++++. + +++|+||+|..+..... ... ... .+++.|+||.+|
T Consensus 175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~--~~~-d~~~~s~~K~~g 250 (432)
T 3a9z_A 175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED--LGV-DFLTIVGHKFYG 250 (432)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH--HCC-SEEEEEGGGTTC
T ss_pred CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh--cCC-CEEEEehhHhcC
Confidence 89999999999999999999999999987 7 99999999986532111 111 122 356899999764
Q ss_pred cccccceeeecCHHH-HHHHH---------HhcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 287 LAGLRVGYGAFPLSI-IEYLW---------RAKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 287 ~~G~r~G~i~~~~~~-~~~l~---------~~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
.|+||++++++. ...+. .....++.+...+.++.++++. .++++ .+++++++++++.+.|+++..
T Consensus 251 ---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 327 (432)
T 3a9z_A 251 ---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG 327 (432)
T ss_dssp ---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 569999998765 22222 1223456788888777777764 34566 888999999999999987522
Q ss_pred Ccc---cC-----CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------CCC-----CCeEEEEe
Q 014594 355 LNP---YP-----SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------KEL-----KGYVRVSV 405 (422)
Q Consensus 355 ~~~---~p-----~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~---------------~~~-----~~~iRis~ 405 (422)
..+ .+ ..+..+++.+++ +.+..++.+.+ .||.++.+.. .+. .+++||++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~ 405 (432)
T 3a9z_A 328 KRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSV 405 (432)
T ss_dssp GGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEEC
T ss_pred CcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEc
Confidence 221 12 123456677764 34566666655 3666665432 121 37999999
Q ss_pred c---ChhhHHHHHHHHhh
Q 014594 406 G---KPEHTDALMECLMH 420 (422)
Q Consensus 406 ~---~~~~~~~l~~al~~ 420 (422)
+ +.++++++.++|+.
T Consensus 406 ~~~~t~eei~~~~~~l~~ 423 (432)
T 3a9z_A 406 GRSTTRAEVDLIVQDLKQ 423 (432)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 8 56677777766654
No 126
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=6.6e-33 Score=271.79 Aligned_cols=315 Identities=16% Similarity=0.057 Sum_probs=223.9
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCC-----CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQL-K----FPY-IYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~y~-----~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
+.+.+.|+.+.+. ++++++.+++.+. . ... .|. .....++++++++++++++++|++|+|+++++..+
T Consensus 18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~ 96 (400)
T 3vax_A 18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA 96 (400)
T ss_dssp ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence 4567888887765 6678888888762 1 100 111 12256899999999999889999999999999999
Q ss_pred HHHhc----CCCC-EEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 163 MRCVL----DPGD-KIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 163 ~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
+++++ ++|| +|+++.++|+.+...... .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+
T Consensus 97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~ 175 (400)
T 3vax_A 97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-PDTLLVSLMHVNNETGVI 175 (400)
T ss_dssp HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-TTEEEEECCSBCTTTCBB
T ss_pred HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-CCceEEEEECCCCCceee
Confidence 99887 8999 999999999876555443 69999999988888899999999997 689999999999999999
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeee-cCH-HHH---HHHHH-
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL-SII---EYLWR- 307 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~-~~~---~~l~~- 307 (422)
++.++|.++++. |+++|+||+|...... . ..... .++++.|+||.+|.+| +|+++ +++ ++. ..+..
T Consensus 176 ~~l~~i~~la~~~~~~li~D~a~~~~~~~---~-~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 248 (400)
T 3vax_A 176 QPVAELAQQLRATPTYLHVDAAQGYGKVP---G-DLTTP-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPI 248 (400)
T ss_dssp CCHHHHHHHHTTSSCEEEEECTTTTTTSG---G-GGGSC-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCS
T ss_pred CcHHHHHHHHHhcCCEEEEEhhhhcCCCC---c-Chhhc-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCce
Confidence 999999999998 9999999999843221 1 12222 4588999999777555 67777 655 111 11111
Q ss_pred --------hcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCC
Q 014594 308 --------AKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGM 373 (422)
Q Consensus 308 --------~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~ 373 (422)
....++.+...+.++.++++. .++++ .+++++++++++.+.|+ .+.+.+.++. ++++++.++ +.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 326 (400)
T 3vax_A 249 MFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE-DV 326 (400)
T ss_dssp SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT-TC
T ss_pred ecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC-CC
Confidence 112345677777766666653 23556 88899999999999999 6555543332 367888887 57
Q ss_pred CHHHHHHHHHhCCcEEEeCCCC--------------CC-----CCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594 374 DAKKLKDDLAKMGVMIRHYNNK--------------EL-----KGYVRVSV-G---KPEHTDALMECLMH 420 (422)
Q Consensus 374 ~~~~~~~~L~~~gI~v~~~~~~--------------~~-----~~~iRis~-~---~~~~~~~l~~al~~ 420 (422)
+.+++.+.|. +||.++++..+ +. ++++||++ + +.++++++.++|++
T Consensus 327 ~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 327 DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 8899999999 99999876421 11 48999999 6 34555666665554
No 127
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=2.7e-32 Score=267.47 Aligned_cols=310 Identities=14% Similarity=0.131 Sum_probs=230.2
Q ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
.+..++|++.+. ++++ ++|++.+++.+ +. . ...|+.+...++++++++++| .+++++++|+++++..+++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~ 115 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIK 115 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHH
Confidence 456788998762 5554 57888888875 21 1 123544557889999999998 5799999999999999999
Q ss_pred HhcC------C-CCEEEEcCCCchh-HHHHHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 165 CVLD------P-GDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 165 ~l~~------~-gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
.+.. + ++.|++.+|+|+. +...+...|.+ ++.++. .|++++++.++ +++++|++
T Consensus 116 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~ 189 (397)
T 2ord_A 116 IARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMS-EDVCAVFL 189 (397)
T ss_dssp HHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCC-TTEEEEEE
T ss_pred HHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhh-cCeEEEEE
Confidence 8753 5 4789999999964 34456667776 677764 38999999997 68999999
Q ss_pred eCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594 225 TSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (422)
Q Consensus 225 ~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~ 297 (422)
++|+||||. +++.+++++|++. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||+++
T Consensus 190 ~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~ 265 (397)
T 2ord_A 190 EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIV 265 (397)
T ss_dssp CSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee---eeccccC-CCcCeEEEEE
Confidence 999999999 8988888877664 9999999999987643322 22233223333 7899998 8999999999
Q ss_pred CHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeC
Q 014594 298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT 370 (422)
Q Consensus 298 ~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~ 370 (422)
+++++ .+.. ....++.+++.+.++.++|+..+. + .+++++++++++.+.|+++ +.....++.++|++++++
T Consensus 266 ~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 343 (397)
T 2ord_A 266 NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR 343 (397)
T ss_dssp CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC
Confidence 98876 5542 223477899999988888864222 3 7778888888888888764 221123456789999997
Q ss_pred CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+..+..++.+.|.++||.++++. ++++||+++ +.++++++.++|++
T Consensus 344 ~~~~~~~l~~~l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~ 392 (397)
T 2ord_A 344 EEVSNREVATKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKK 392 (397)
T ss_dssp TTSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 65678999999999999999874 589999954 44555555555543
No 128
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.98 E-value=1.7e-31 Score=262.29 Aligned_cols=311 Identities=16% Similarity=0.215 Sum_probs=230.4
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+++++|+..+ .++++ .+|++.+++.+ +.. ...|+.+...+++++++++++. ++|++|+|++++++.++
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~~al 113 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAAL 113 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHH
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHHHHH
Confidence 456778999887 24444 47888888875 221 1345666678999999999985 49999999999999999
Q ss_pred HHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (422)
Q Consensus 164 ~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (422)
+.++. +| |+|++.+|+|+.+...+...+. .+..++. .|+++|+++++ +++++|
T Consensus 114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v 187 (406)
T 4adb_A 114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID-DSTCAV 187 (406)
T ss_dssp HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS-TTEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc-CCeEEE
Confidence 98765 66 9999999999877555544443 3444442 47999999997 789999
Q ss_pred EEeCCCCccCcCC--CHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccccccee
Q 014594 223 FLTSPNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 223 ~l~~p~NPtG~~~--~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
+++ |+||||.++ +.+++++|++. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||
T Consensus 188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~ 262 (406)
T 4adb_A 188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGA 262 (406)
T ss_dssp EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEE
T ss_pred EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEE
Confidence 988 999999988 77777766553 9999999999987654332 22333334444 6799999 9999999
Q ss_pred eecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEE
Q 014594 295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE 368 (422)
Q Consensus 295 i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~ 368 (422)
+++++++++.+.... ..++.+++.+.++.++|+..+..+.+++++++++++.+.|++++ .....+..++++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~ 342 (406)
T 4adb_A 263 LLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCV 342 (406)
T ss_dssp EEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEE
T ss_pred EEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEE
Confidence 999999998876543 34788999999999888643222277788888888888887642 122233467899999
Q ss_pred eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 369 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 369 ~~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+++.. +..++.+.|.++||.+++++ ++++||+++ +.++++++.++|+
T Consensus 343 ~~~~~~~~~~~~~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 343 LNADYAGQAKQISQEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp ECTTTTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EeCCcHHHHHHHHHHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 97543 68899999999999999875 689999654 3444444444443
No 129
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.98 E-value=2.4e-31 Score=260.56 Aligned_cols=315 Identities=16% Similarity=0.148 Sum_probs=227.2
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC-CC---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++++|+..| .++++ .+|++.+++.+ +.. .+ .|+++...+++++++++++ +++|++++|+++++..++
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al 110 (395)
T 3nx3_A 33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAM 110 (395)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHH
Confidence 456789999988 67776 57899988876 322 12 2455557889999999998 579999999999999999
Q ss_pred HHhc-------CCCCEEEEcCCCchhHHHHHHHcC-------------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 164 RCVL-------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 164 ~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
+.+. .++|+|++..|+|+.+...+...+ ..+..++. .|+++++++++ +++++|+
T Consensus 111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~ 184 (395)
T 3nx3_A 111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVN-EKTCAII 184 (395)
T ss_dssp HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCC-TTEEEEE
T ss_pred HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhcc-CCeEEEE
Confidence 8765 457999999999976654443322 34555542 27999999997 6889999
Q ss_pred EeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 224 l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
+++++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+.... ....+....+.||||.++ +|+|+||++++
T Consensus 185 ~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~-~~~~~~~~d~~t~sK~~~-~G~~~G~~~~~ 262 (395)
T 3nx3_A 185 LESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFA-YEHAQILPDIMTSAKALG-CGLSVGAFVIN 262 (395)
T ss_dssp EESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSEEEECGGGT-TTSCCEEEEEC
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchh-HHhcCCCCCEEEeccccc-CCCceEEEEEc
Confidence 9988888888855 5555556665 999999999998864332111 111122222447899998 59999999999
Q ss_pred HHH-HHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594 299 LSI-IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 371 (422)
Q Consensus 299 ~~~-~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 371 (422)
+++ ++.+.... .+++.+++++.++.++|+. +++.+ .++.....++.+.+.+.+++.+...++.++|+++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (395)
T 3nx3_A 263 QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDK 342 (395)
T ss_dssp HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT
T ss_pred hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCC
Confidence 998 77775543 3578899999999988863 34444 44444455555555555566444456678999999986
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
..+..++.+.|.++||.+++++ ++++||+++ +.++++++.++|++
T Consensus 343 ~~~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~ 390 (395)
T 3nx3_A 343 SVKVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRK 390 (395)
T ss_dssp TSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5578999999999999999875 689999854 44555555555543
No 130
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.98 E-value=1.1e-31 Score=266.29 Aligned_cols=324 Identities=16% Similarity=0.113 Sum_probs=221.6
Q ss_pred CCCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~----~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+..++|+..+.+ +++ .+|++.+++.+ +. ....|+.....++++++++++++++++|++|+|++++++.++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~ 119 (433)
T 1zod_A 40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAI 119 (433)
T ss_dssp TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHH
Confidence 34567889877653 454 47889888865 21 123456555688999999999988899999999999999999
Q ss_pred HHhc--CCCCEEEEcCCCchhHHHHHHHc--------------CCEEEEecCC--CCCC--------CCHHHHHHHhhc-
Q 014594 164 RCVL--DPGDKIVDCPPTFTMYEFDAAVN--------------GAAVVKVPRK--SDFS--------LNVELIADAVER- 216 (422)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--------------g~~~~~v~~~--~~~~--------~d~~~l~~~i~~- 216 (422)
+.+. ..+|+|++.+|+|+.+...+... |+..+.++.. ..++ +|+++|++.+++
T Consensus 120 ~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 199 (433)
T 1zod_A 120 RMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ 199 (433)
T ss_dssp HHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc
Confidence 8653 23589999999997654433321 3334433321 1122 369999999864
Q ss_pred --CCCeEEEEeCCCCccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhcc
Q 014594 217 --EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~ 287 (422)
+++++|+++..+||||... + .+++.++++. |+++|+||+|.+|...+. .........+ +.||||.++.
T Consensus 200 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d---i~s~sK~~~~ 276 (433)
T 1zod_A 200 SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD---ILTLSKTLGA 276 (433)
T ss_dssp CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECHHHHT
T ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC---EEEecccccC
Confidence 4566666544468899755 4 5556666665 999999999998864332 1222222333 3489999994
Q ss_pred ccccceeeecCHHHHHHHHHh--c--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccC
Q 014594 288 AGLRVGYGAFPLSIIEYLWRA--K--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYP 359 (422)
Q Consensus 288 ~G~r~G~i~~~~~~~~~l~~~--~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p 359 (422)
|+|+||+++++++++.+... . .+++.+++++.++.++|+..+-.+..++++++++++.+.|++ ++.+...+
T Consensus 277 -G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 355 (433)
T 1zod_A 277 -GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVR 355 (433)
T ss_dssp -TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred -CCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 99999999999999988763 2 457789999998888886311101455666667777776665 34333345
Q ss_pred CCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 360 SYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 360 ~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+.|+|+|+++++. .+..++.+.|.++||.+.++..++.++++||+++ +.++++++.++|+
T Consensus 356 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~ 426 (433)
T 1zod_A 356 GRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLG 426 (433)
T ss_dssp EETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 6788999988631 2367899999999999998875444589999864 3444444444443
No 131
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.97 E-value=2.4e-30 Score=249.52 Aligned_cols=313 Identities=12% Similarity=0.096 Sum_probs=223.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCC--CCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKF--PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~ 172 (422)
++++|+.+.+. ++++++.+++.+... ...+ ...-..++++.+++++|.++++|++|+|+++++..+++.++++||+
T Consensus 14 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~ 92 (359)
T 1svv_A 14 KPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA 92 (359)
T ss_dssp -CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred eeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence 47999998777 778999999987322 1111 1223567888888889988889999999999999999999999999
Q ss_pred EEEcCCCchhHHH--HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC------CCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 173 IVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 173 Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
|+++.|+|+.+.. .++..|++++.++.+ ++.+|++++++.+++. ++++|++++| ||||.+++.+++++|+
T Consensus 93 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~ 170 (359)
T 1svv_A 93 VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDIS 170 (359)
T ss_dssp EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHH
T ss_pred EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHH
Confidence 9999999998876 477899999999975 6789999999999754 3899999999 7999999966655554
Q ss_pred ---cC-CCeEEEccCCccccCC--Cchhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc--CC--CC
Q 014594 245 ---EM-PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QP--YN 313 (422)
Q Consensus 245 ---~~-~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~--~~ 313 (422)
+. |+++|+||+|..|..+ +.....+. .....+++.|++|..+ ..++|++++++++++.+.... .. +.
T Consensus 171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T 1svv_A 171 ASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMA 248 (359)
T ss_dssp HHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred HHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence 44 9999999999554211 11001000 0012267778899533 345799999988877665431 22 22
Q ss_pred CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEe
Q 014594 314 VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRH 391 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~~ 391 (422)
.+.....++.+++++..+.+.+++++++++++.+.|+ .+.+.+ .|.+++|+|++++ +++.+.|.++ ||.+.+
T Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~gi~v~~ 322 (359)
T 1svv_A 249 KGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLE-ACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTVE 322 (359)
T ss_dssp TTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHH-HTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEEE
T ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc-cCCeEEccCCccceEEEEcC-----HHHHHHHHHhcCEEEEe
Confidence 2333333344567764443388899999999999994 333443 4778899998885 4788889887 999943
Q ss_pred CCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 392 YNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 392 ~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.. ...++++||+++ +.++++++.++|++
T Consensus 323 ~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 323 PL-KDGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp EE-TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cc-cCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 21 234579999875 34455555555543
No 132
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=1.4e-30 Score=255.64 Aligned_cols=308 Identities=15% Similarity=0.173 Sum_probs=236.6
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD 171 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd 171 (422)
.+++||+.+.++++ +++.+++.+. .. ..| +.++..++|++++++++.+ ++++++|+++++..+++++ +++||
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd 104 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGD 104 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcC
Confidence 35788988888775 8888888763 22 245 4567899999999999975 6778888899999999998 89999
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCe
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~ 249 (422)
+|+++.|+|+.+...++..|++++.++.++ ++.+|++++++.++ +++++|+ |+||||.+.+.+++.++++. |++
T Consensus 105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~ 180 (399)
T 2oga_A 105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-PRTRALL---PVHLYGHPADMDALRELADRHGLH 180 (399)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCE
Confidence 999999999999999999999999999754 57899999999997 5788887 67899999999999999988 999
Q ss_pred EEEccCCcccc-CCCchhhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC--------------
Q 014594 250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------- 311 (422)
Q Consensus 250 li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-------------- 311 (422)
+|+||+|..+. ++..... .. .++++.|+ ||.++.+| |+||++++ +++++.+......
T Consensus 181 li~Dea~~~g~~~~~~~~~---~~-~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~ 255 (399)
T 2oga_A 181 IVEDAAQAHGARYRGRRIG---AG-SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTN 255 (399)
T ss_dssp ECEECTTCTTCEETTEETT---CT-TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCB
T ss_pred EEEECcccccCccCCeecc---cc-cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccC
Confidence 99999998663 2222111 11 24788888 79999779 99999986 8888877654321
Q ss_pred CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEE--EEeCCCCCHHHHHHHHHhCC
Q 014594 312 YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YPSYSNFIL--CEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~--~~~~~~~~~~~~~~~L~~~g 386 (422)
+..+.+.+.++.++++. ++ ..++.+++++++.+.|++++.+.+ .|+.++++| +.+. ..+.+++.+.|.++|
T Consensus 256 ~~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~g 331 (399)
T 2oga_A 256 SRLDEMQAAVLRIRLAH---LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR-TERRDELRSHLDARG 331 (399)
T ss_dssp CCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE-CSSHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE-CCCHHHHHHHHHHCC
Confidence 35677777777777754 33 556667778889999988754443 345566665 4443 247889999999999
Q ss_pred cEEEeCCCCC----------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNKE----------------L-------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~~----------------~-------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++++.... . .+++||++. +.++++++.++|++
T Consensus 332 I~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 391 (399)
T 2oga_A 332 IDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE 391 (399)
T ss_dssp BCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred CceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 9998754210 0 268999987 66777777777765
No 133
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=2.7e-31 Score=257.05 Aligned_cols=305 Identities=15% Similarity=0.091 Sum_probs=222.1
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhc-CCC-----------CCCCCCc--chHHHHHHHHHHcCCCCC-C-EEEeCCHHHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELID 160 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~y~~~--~~~~lr~~la~~~~~~~~-~-i~~~~G~~~al~ 160 (422)
++.+..+ +.++++.+++++.+ +.. .++|+.. -..++++.+++++|++++ + +++|+|+++++.
T Consensus 5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence 3445444 57788999999876 321 2233332 146789999999998764 6 578899999999
Q ss_pred HHHHHhcCCCCEEEEcCCCchh--HHHHHHHcCCEEEEecCC--CCCC--CCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRK--SDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~--~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
.++.+++++||+|++..+.+.. +...++..| +++.++.+ ++++ +|.++++ ++ +++|+|++++|+||||.+
T Consensus 83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~~n~tG~~ 158 (362)
T 2c0r_A 83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSNETIEGAQ 158 (362)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESEETTTTEE
T ss_pred HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCCcCcccee
Confidence 9999999999999888766443 235666789 99888854 2233 4666553 54 689999999999999997
Q ss_pred CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh------
Q 014594 235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------ 308 (422)
Q Consensus 235 ~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~------ 308 (422)
++ ++++| .|+++|+|++|..+..... +... .+++.|+||.+|++| +||+++++++++.+...
T Consensus 159 ~~--~l~~i--~~~~vivD~a~~~~~~~~~----~~~~--d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~ 226 (362)
T 2c0r_A 159 FK--AFPDT--GSVPLIGDMSSDILSRPFD----LNQF--GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLR 226 (362)
T ss_dssp CS--SCCCC--TTSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGC
T ss_pred cc--ccccc--CCCEEEEEChhhccCCccc----hhHC--cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHh
Confidence 54 23333 5999999999986643211 2222 377889999999888 99999998877655321
Q ss_pred --------cCCCCCcHHHHHHHHHHccC--Ch-HHH-HHHHHHHHHHHHHHHHccCC-CCccc----CCCceEEEEEeCC
Q 014594 309 --------KQPYNVSVAAEVAACAALQN--PI-YLE-VKEALIKERERLFKLLKDVP-FLNPY----PSYSNFILCEVTS 371 (422)
Q Consensus 309 --------~~~~~~~~~~~~aa~~~L~~--~~-~~~-~~~~~~~~~~~l~~~L~~~~-~~~~~----p~~~~f~~~~~~~ 371 (422)
...++++...+.++.++|+. .. +++ ++++++++++++.+.|++++ +..+. ...+.++++.+++
T Consensus 227 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (362)
T 2c0r_A 227 YDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS 306 (362)
T ss_dssp HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC
T ss_pred HHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC
Confidence 23467888888888888864 22 456 88999999999999999987 32331 1234567888875
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+.+..++.+.|.++||.+.++... .+++|||++ +.++++++.++|+++
T Consensus 307 ~~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 307 EELEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp HHHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 456788999999999988776533 468999998 567778887777653
No 134
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=5.5e-30 Score=250.20 Aligned_cols=304 Identities=18% Similarity=0.167 Sum_probs=227.5
Q ss_pred CCCCCC-C---HHHHHHHhc-CCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Q 014594 104 ENPYGP-P---PEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVD 175 (422)
Q Consensus 104 ~~~~~~-~---~~v~~al~~-~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~ 175 (422)
+++|++ | +++.+++.+ +..+ ..| +.++..++|++++++++.+ +.|++++| +++++++++++ +++||+|++
T Consensus 6 ~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~ 83 (388)
T 1b9h_A 6 APEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVIV 83 (388)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEE
Confidence 456665 5 788888876 3222 233 6667899999999999975 56777766 89999999998 899999999
Q ss_pred cCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594 176 CPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (422)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D 253 (422)
+.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|+ |+||||.+.+.+++.++++. |+++|+|
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D 159 (388)
T 1b9h_A 84 PAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQD 159 (388)
T ss_dssp ESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEE
T ss_pred CCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEe
Confidence 99999999999999999999999764 47899999999997 6788877 99999999999999999988 9999999
Q ss_pred cCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-H--HHHHHHhcC-----------------CC
Q 014594 254 EAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I--IEYLWRAKQ-----------------PY 312 (422)
Q Consensus 254 eay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~--~~~l~~~~~-----------------~~ 312 (422)
++|..+. +.+..... .+ ++.+.||||..+++|.|+||++++++ + ++.+..... .+
T Consensus 160 ~a~~~g~~~~~~~~~~---~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (388)
T 1b9h_A 160 AAHAHGARWQGKRVGE---LD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM 235 (388)
T ss_dssp CTTCTTCEETTEEGGG---SS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred cchhcCCccCCeeccc---cc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence 9998643 22222221 22 47888999777777789999999875 6 566643321 01
Q ss_pred CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-------CCceEEEEEeCCC--CCHHHHHHHH
Q 014594 313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP-------SYSNFILCEVTSG--MDAKKLKDDL 382 (422)
Q Consensus 313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-------~~~~f~~~~~~~~--~~~~~~~~~L 382 (422)
.++.+...++...+ ++++ .+++++++++++.+.|++++.+.+.+ ..++|+|+++++. .+.+++.+.|
T Consensus 236 ~~~~~~~a~~~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 312 (388)
T 1b9h_A 236 RLNEFSASVLRAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRL 312 (388)
T ss_dssp BCBHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHH
Confidence 24555444443333 3455 77788889999999999885555432 3468999999742 2577899999
Q ss_pred HhCCcEEEeCCCCC----------------------C-------CCeEEEEec----ChhhHHHHHHHHhh
Q 014594 383 AKMGVMIRHYNNKE----------------------L-------KGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 383 ~~~gI~v~~~~~~~----------------------~-------~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
.++||.++++..+. . .+.+||++. +.++++++.++|++
T Consensus 313 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 313 VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 99999998765421 0 135999975 45566777776654
No 135
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=4e-31 Score=262.66 Aligned_cols=321 Identities=13% Similarity=0.114 Sum_probs=221.9
Q ss_pred CCCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHH
Q 014594 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDL 161 (422)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~ 161 (422)
..+++++|+..+.+ +++ .+|++.+++.+ +.... .|+.....+++++++++++... +++++++|++++++.
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~ 119 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEA 119 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHH
Confidence 35677999998876 555 78999988875 22212 2233446789999999987655 799999999999999
Q ss_pred HHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCE-E--------------EEecCCCCCCC-----CHHHHHHHhh---c
Q 014594 162 IMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAA-V--------------VKVPRKSDFSL-----NVELIADAVE---R 216 (422)
Q Consensus 162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~-----d~~~l~~~i~---~ 216 (422)
+++.+ ..+++.|++.+|+|+.+...+...+.. . ..++.++.+.. |+++|+++++ .
T Consensus 120 al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (439)
T 3dxv_A 120 AYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA 199 (439)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC
Confidence 99975 335678999999997555444333222 1 22332222122 6999999983 3
Q ss_pred CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhcccc
Q 014594 217 EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G 289 (422)
+++++|++++++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+. .....+...+++ ||||.++ +|
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~---s~sK~~~-~G 275 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GG 275 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TT
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE---EEcchhc-CC
Confidence 57889998888999999998 7888888876 999999999998754332 222222233333 8999999 69
Q ss_pred ccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCce
Q 014594 290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSN 363 (422)
Q Consensus 290 ~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~ 363 (422)
+|+||+++++++++.+... ...+ .+++++.++.++|+..+..+..++++++++++.+.|+ .++.+...++.|+
T Consensus 276 ~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 354 (439)
T 3dxv_A 276 LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGL 354 (439)
T ss_dssp SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT
T ss_pred cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEE
Confidence 9999999999998877654 3457 8999999998888632111144445555555555444 4554445567788
Q ss_pred EEEEEe--------CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 364 FILCEV--------TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 364 f~~~~~--------~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
|+++++ |...+..++.+.|+++||.++++.. .++++||+++ +.++++++.++|+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~ 419 (439)
T 3dxv_A 355 ACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLD 419 (439)
T ss_dssp EEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 999887 3333467888999999999998753 3589999865 3444444444443
No 136
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=1.2e-30 Score=257.71 Aligned_cols=312 Identities=16% Similarity=0.193 Sum_probs=227.7
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
..+..++|+..+. ++++ .+|++.+++.+ +.. ...|+.+...+++++++++++ .++|++++|++++++.++
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al 131 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAF 131 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHH
Confidence 4567789998773 5554 57889888876 222 123555557889999999998 579999999999999999
Q ss_pred HHhcC-------CC-CEEEEcCCCchhHHH-HHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594 164 RCVLD-------PG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI 222 (422)
Q Consensus 164 ~~l~~-------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (422)
+.+.. +| ++|++.+|+|+.+.. .....|.+ +..++. .|+++|++.++ +++++|
T Consensus 132 ~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~-~~~~~v 205 (420)
T 2pb2_A 132 KLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMD-DHTCAV 205 (420)
T ss_dssp HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCC-TTEEEE
T ss_pred HHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhc-cCceEE
Confidence 98765 67 589999999976543 33445543 555553 38999999997 689999
Q ss_pred EEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceee
Q 014594 223 FLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (422)
Q Consensus 223 ~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i 295 (422)
++++++|++|. +++.+.+++|++. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||+
T Consensus 206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii---t~sK~l~-~G~~iG~~ 281 (420)
T 2pb2_A 206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAM 281 (420)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEE
T ss_pred EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE---Eeccccc-CCCceEEE
Confidence 99988998884 5787777766553 9999999999887654432 22233334444 6899999 89999999
Q ss_pred ecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEe
Q 014594 296 AFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEV 369 (422)
Q Consensus 296 ~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~ 369 (422)
++++++++.+.. ....++.|++++.++.++|+..+..+..++++++++++.+.|+++ +.+...++.|+|+++++
T Consensus 282 ~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~ 361 (420)
T 2pb2_A 282 LTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAEL 361 (420)
T ss_dssp EECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEE
T ss_pred EEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEE
Confidence 999998776654 234477899999998888864222226777888888888888764 33222345688999998
Q ss_pred CCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 370 TSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 370 ~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
+... +..++.+.|.++||.++++. ++++||+++ +.++++++.++|+
T Consensus 362 ~~~~~~~~~~l~~~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~ 412 (420)
T 2pb2_A 362 KPKYKGRARDFLYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFA 412 (420)
T ss_dssp CGGGTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 7432 68899999999999999875 589999954 4555555555554
No 137
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=1.7e-30 Score=257.09 Aligned_cols=278 Identities=14% Similarity=0.110 Sum_probs=216.0
Q ss_pred EcCCCCCCCCCCHHHHHHHhc-CCCCCCCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594 99 KIDANENPYGPPPEVREALGQ-LKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (422)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~ 175 (422)
+|+.+++++++|+++.+++.+ +.. ..|+. .+..++|++++++++. +++++|+|+++++..+++++. +||+|++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~-~~y~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~l~~l~-~gd~Vlv 95 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGV--RHAVATCNATAGLQLLAHAAG-LTGEVIM 95 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHHT-CCSEEEE
T ss_pred cccccCCCCCChHHHHHHHHHHHhc-CCcccCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcC-CCCEEEE
Confidence 688899999998999988876 332 35765 5789999999999996 589999999999999999875 7899999
Q ss_pred cCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594 176 CPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (422)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D 253 (422)
+.|+|..+...++..|++++.++.++ ++.+|++++++.++ +++++|+++| |||...+.+++.++++. |+++|+|
T Consensus 96 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~D 171 (424)
T 2po3_A 96 PSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-PRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFD 171 (424)
T ss_dssp ESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-TTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-cCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEE
Confidence 99999999999999999999999764 67899999999997 5899999864 89999999999999987 9999999
Q ss_pred cCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC-----C---------CCcHH
Q 014594 254 EAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----Y---------NVSVA 317 (422)
Q Consensus 254 eay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----~---------~~~~~ 317 (422)
|+|.. +.+++.... ...+ +++.||||..+++|+|+||++++ +++++.+...... + ..+.+
T Consensus 172 ea~~~g~~~~~~~~~---~~~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 247 (424)
T 2po3_A 172 AAHALGCAVDGRPAG---SLGD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEA 247 (424)
T ss_dssp CTTCTTCEETTEETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHH
T ss_pred CccccCCeECCeecc---cccC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHH
Confidence 99994 544332221 1223 88999996667778999999998 8998888764332 1 12333
Q ss_pred HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCc----eEEEEEeCC---CCCHHHHHHHHHhCCc
Q 014594 318 AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYS----NFILCEVTS---GMDAKKLKDDLAKMGV 387 (422)
Q Consensus 318 ~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~----~f~~~~~~~---~~~~~~~~~~L~~~gI 387 (422)
...++.. ..++++ ..++.+++++++.+.|++++.+.+.+ .++ .++++.+++ +.+.+++.+.|.++||
T Consensus 248 ~aa~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI 324 (424)
T 2po3_A 248 AAAMGLT---SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGV 324 (424)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTE
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCC
Confidence 3333332 223455 77777888889999998875555433 222 234477764 5678999999999999
Q ss_pred EEEe
Q 014594 388 MIRH 391 (422)
Q Consensus 388 ~v~~ 391 (422)
.+++
T Consensus 325 ~v~~ 328 (424)
T 2po3_A 325 HTRA 328 (424)
T ss_dssp ECBC
T ss_pred ceec
Confidence 9987
No 138
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=2.1e-30 Score=258.58 Aligned_cols=322 Identities=12% Similarity=0.075 Sum_probs=222.0
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.++++++|+..| .++++ .+|++.+++.+ +... ..|+.+...+++++++++++.+.+ |++|+|++++++.++
T Consensus 46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al 124 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAF 124 (452)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHH
Confidence 456789999988 35554 46999988876 3221 234445567899999999987666 999999999999999
Q ss_pred HHhc-----C---CCCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCC---C---------HHHH
Q 014594 164 RCVL-----D---PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSL---N---------VELI 210 (422)
Q Consensus 164 ~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~---d---------~~~l 210 (422)
+.++ . ++|+|++..|+|+.+...+...+.. +..++....+.. | +++|
T Consensus 125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (452)
T 3n5m_A 125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV 204 (452)
T ss_dssp HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence 9876 5 7799999999998776555544322 334442111111 2 8999
Q ss_pred HHHhh---cCCCeEEEEeCC-CCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594 211 ADAVE---REKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (422)
Q Consensus 211 ~~~i~---~~~~~~i~l~~p-~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~ 279 (422)
++.++ .+++++|+++++ +| ||.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+ +.
T Consensus 205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d---i~ 280 (452)
T 3n5m_A 205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD---II 280 (452)
T ss_dssp HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS---EE
T ss_pred HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC---EE
Confidence 99886 356778888877 89 998885 5666666666 9999999999988654322 122222223 33
Q ss_pred cChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF 346 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~ 346 (422)
+|||.++. | +|+||+++++++++.+.. ...+++.++++++++.++|+. +++.+ .++.....++.|.
T Consensus 281 t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~ 359 (452)
T 3n5m_A 281 TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLK 359 (452)
T ss_dssp EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 68999985 9 999999999999988743 223578899999999998873 33333 4444444445555
Q ss_pred HHHccCCCCcccCCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecC---hhhHH
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGK---PEHTD 412 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~~---~~~~~ 412 (422)
+.+++++.+...+..|.|+++++.... ...++.+.|+++||.++++.. ...++++||+++. .++++
T Consensus 360 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~ 439 (452)
T 3n5m_A 360 EEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIA 439 (452)
T ss_dssp HHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHH
T ss_pred HHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHH
Confidence 555556655455677888888774211 135688888999999998774 3346899997653 44444
Q ss_pred HHHHHHh
Q 014594 413 ALMECLM 419 (422)
Q Consensus 413 ~l~~al~ 419 (422)
++.++|+
T Consensus 440 ~~l~~l~ 446 (452)
T 3n5m_A 440 FVIGTLK 446 (452)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 139
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=1e-29 Score=248.59 Aligned_cols=307 Identities=17% Similarity=0.189 Sum_probs=232.7
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V 173 (422)
++|+|+. +.+ ++++.+++.+ +.....++.++..++|++++++++. +++++++|+++++..+++++ +++||+|
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~al~~~~~~~~~~~gd~V 82 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEV 82 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHHHHhCC--CcEEEecChHHHHHHHHHHcCCCCCCEE
Confidence 4677775 333 4677788766 3222223566789999999999996 48999999999999999999 8999999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (422)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li 251 (422)
+++.|+|..+...++..|++++.++.++ ++.+|++++++.++ .++++|+++ ||||.+.+.+++.++++. |+++|
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li 158 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVI 158 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999754 46799999999997 588998865 489999999999999987 99999
Q ss_pred EccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC------------------
Q 014594 252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------ 311 (422)
Q Consensus 252 ~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------ 311 (422)
+||+|..+. +..... .. .++++.||||..+++|.|+||++++ +++++.+......
T Consensus 159 ~D~a~~~g~~~~~~~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T 1mdo_A 159 EDAAHATGTSYKGRHI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQA 233 (393)
T ss_dssp EECTTCTTCEETTEET---TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CC
T ss_pred EECccccCCeECCeec---CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccc
Confidence 999999642 222211 11 5688999994444556699999996 8888887754321
Q ss_pred --------CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc--C-----CCceEEEEEeCC---C
Q 014594 312 --------YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY--P-----SYSNFILCEVTS---G 372 (422)
Q Consensus 312 --------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p-----~~~~f~~~~~~~---~ 372 (422)
+..+.+...++...++. ++ ..++.+++++++.+.|++++ +.+. + ..++++|+++++ +
T Consensus 234 ~~~~~g~~~~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 309 (393)
T 1mdo_A 234 EVLAPGYKYNLPDLNAAIALAQLQK---LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCG 309 (393)
T ss_dssp EESSCCCBCCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred cccccCccCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccc
Confidence 12355555544444432 34 66666778899999999887 4432 2 345678999974 5
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCC--------------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 373 MDAKKLKDDLAKMGVMIRHYNNK--------------EL-------KGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 373 ~~~~~~~~~L~~~gI~v~~~~~~--------------~~-------~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.+.+++.+.|.++||.++++..+ .. .+++||++. +.++++++.++|+.+
T Consensus 310 ~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 310 ITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp SCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 68899999999999999886532 11 348999998 677778888777653
No 140
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.97 E-value=1.4e-30 Score=260.34 Aligned_cols=321 Identities=13% Similarity=0.087 Sum_probs=229.0
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCC---CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~---~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.+++++||+..| .++++ .+|++.+++.+ + ... ..|+.+...+|+++++++++.+.++|++|+|++++++.
T Consensus 48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~ 127 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET 127 (460)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 456789999887 45565 46888888765 2 111 23455556789999999988778899999999999999
Q ss_pred HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCC-----CCCCCC--------H
Q 014594 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRK-----SDFSLN--------V 207 (422)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~-----~~~~~d--------~ 207 (422)
+++.+.. ++++|++..|+|+.+...+...+. .+..++.. ++++.+ +
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 207 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA 207 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence 9998763 468999999999876655443321 24444422 222344 5
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
++|++.+.+ +++++|+++.++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...++
T Consensus 208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi-- 285 (460)
T 3gju_A 208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDL-- 285 (460)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSE--
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe--
Confidence 888888863 45678887777888888555 5666666665 9999999999988644321 2222223333
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERE 343 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~ 343 (422)
.+|||.++ +| +|+||+++++++++.+.. ...+|+.++++++++.++|+ ++++.+ .++.....++
T Consensus 286 -~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 363 (460)
T 3gju_A 286 -ITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRA 363 (460)
T ss_dssp -EEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -eeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 36889987 46 899999999999998863 22357889999999999987 345555 6666777777
Q ss_pred HHHHHHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594 344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 409 (422)
Q Consensus 344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 409 (422)
.+.+.+++++.+...+..|.|+++++....+ ..++.+.|+++||.++++. .++++||++. +.+
T Consensus 364 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e 440 (460)
T 3gju_A 364 ELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTRE 440 (460)
T ss_dssp HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHH
T ss_pred HHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHH
Confidence 7877787777655556778899998863221 5678899999999999875 3589999954 445
Q ss_pred hHHHHHHHHh
Q 014594 410 HTDALMECLM 419 (422)
Q Consensus 410 ~~~~l~~al~ 419 (422)
+++++.++|+
T Consensus 441 ~i~~~l~~l~ 450 (460)
T 3gju_A 441 QADIVVSKTA 450 (460)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555444
No 141
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=1.1e-30 Score=259.19 Aligned_cols=317 Identities=15% Similarity=0.094 Sum_probs=219.6
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.++++++|+..+. ++++ .+|++.+++.+ +. ...+||++...+|+++++++++ .+++|++++|++++++.+++
T Consensus 51 d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~ 129 (434)
T 3l44_A 51 DVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIR 129 (434)
T ss_dssp ETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence 34577899998875 5666 58999988875 22 2245788788899999999997 68899999999999999999
Q ss_pred HhcC--CCCEEEEcCCCchhHHHHHHHcCC-EEEE--ecCCCCC------------CCCHHHHHHHhhc--CCCeEEEEe
Q 014594 165 CVLD--PGDKIVDCPPTFTMYEFDAAVNGA-AVVK--VPRKSDF------------SLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 165 ~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~--v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
.+.. ++++|++..|+|+.+...+...+. .... .|...+. .-|++++++++++ +++++|+++
T Consensus 130 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 209 (434)
T 3l44_A 130 VARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVE 209 (434)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEEC
T ss_pred HHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEc
Confidence 7654 678999999999765443322221 1111 1111110 0189999998864 356677766
Q ss_pred CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
+++|++|.+.+ .+++.++|+. |+++|+||+|.+| ..+.. ....+...+ +.||||.++ +|+|+||++++
T Consensus 210 p~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~ 284 (434)
T 3l44_A 210 PIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD---LTALGKVIG-GGLPIGAYGGK 284 (434)
T ss_dssp SSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS---EEEEEGGGG-TTSSCEEEEEC
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC---eeehhhhhc-CCcCeeeEEEc
Confidence 66777888886 7778888877 9999999999988 43321 222222233 447899998 89999999999
Q ss_pred HHHHHHHHH-----hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEE
Q 014594 299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSNFIL 366 (422)
Q Consensus 299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~ 366 (422)
+++++.+.. ...+++.+++++.++.++|+. ++ ..++++++++++.+.|+ .++.....+..++|++
T Consensus 285 ~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~ 361 (434)
T 3l44_A 285 KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEG---LYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALT 361 (434)
T ss_dssp HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEE
T ss_pred HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEE
Confidence 999988765 234588899999999988863 33 33444444444444444 4554444566788998
Q ss_pred EEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594 367 CEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 420 (422)
Q Consensus 367 ~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 420 (422)
+.+... .+..++.+.|+++||.++++. .+++|+++. +.++++++.++|++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~ 425 (434)
T 3l44_A 362 VYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGR 425 (434)
T ss_dssp EEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHH
Confidence 887421 123678888999999999875 367899865 34455555555443
No 142
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=6.5e-31 Score=253.94 Aligned_cols=316 Identities=15% Similarity=0.022 Sum_probs=226.3
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE--
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK-- 172 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~-- 172 (422)
..+.+..++|+++++|++.+++.+......| ++++..+++++++++++.+. .++++|+++++..++++++.+||.
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~~~~g~~~v 91 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIWADRKENRR 91 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBCCBTTBSHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcccCcccCCHHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHHhcCCCcE
Confidence 4477788899999999999998873222344 66788999999999999753 355588889999999999888886
Q ss_pred EEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc-CcCCCHHHHHHHHc---
Q 014594 173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILE--- 245 (422)
Q Consensus 173 Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~--- 245 (422)
|+++.+.|.... ..+...|++++.++. +++.+|+++++++ . +++++|++++|+||+ |.+++.+++++|++
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~ 168 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCH 168 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S-SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c-CCceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence 555656554321 223457999999987 4568999999998 4 789999999999998 79999999966654
Q ss_pred C-CCeEEEccCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----CCCcHHH
Q 014594 246 M-PILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAA 318 (422)
Q Consensus 246 ~-~~~li~Deay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~~~~~~~ 318 (422)
. |+++|+|++|..+.. .+.....+.. ...+++.|+||.++.++ + ||+++++++++.+...... .......
T Consensus 169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T 3pj0_A 169 EQGISLHLDGARLWEITPFYQKSAEEICA-LFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYPY 245 (359)
T ss_dssp HHTCEEEEEETTCGGGHHHHTCCHHHHHT-TCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHH
T ss_pred HcCCEEEEECcchhcchhhhCCCHHHhhc-cCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHHH
Confidence 3 999999999875431 1111111212 22255668999887553 2 8888999999988764321 1122233
Q ss_pred HHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCC
Q 014594 319 EVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNN 394 (422)
Q Consensus 319 ~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~~ 394 (422)
+.++..++++. .+..+++.++++++.+.|++++.+.+ .|+.++|+|++++.. .+.+++.+.|.++||.++++..
T Consensus 246 ~~a~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~ 323 (359)
T 3pj0_A 246 ILSADYYFEKR--IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQ 323 (359)
T ss_dssp HHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCE
T ss_pred HHHHHHHHHHH--HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCcc
Confidence 33333445332 23344567888999999999865654 468899999998632 2467888899999999999865
Q ss_pred C--CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 395 K--ELKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 395 ~--~~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
+ ...+++|++++. ..+.+++.+++++|
T Consensus 324 ~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l 355 (359)
T 3pj0_A 324 EKSADVCAFEVSVGDAFAEIPAKNLELVFRCL 355 (359)
T ss_dssp EEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred ccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence 3 235689999863 23467888888876
No 143
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=5.7e-30 Score=251.13 Aligned_cols=307 Identities=14% Similarity=0.115 Sum_probs=222.9
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC---CC--CCCCCCc--chHHHHHHHHHHcCCC-CCCEEE-eCCHHHHHHHHHHHh
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL---KF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCV 166 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~--~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~-~~G~~~al~~~~~~l 166 (422)
+++++. .++.++++++++++.+. .. .+.||+. ...++|+++++++|++ +++|++ |+|++++++++++++
T Consensus 40 ~~~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l 117 (398)
T 2fyf_A 40 RDGRFG--SGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL 117 (398)
T ss_dssp SSCBCC--SSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred CCcccc--CCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence 345555 45667789999998762 11 1344443 2578999999999997 468998 999999999999999
Q ss_pred cCCCCEEEEcCCCchh-HHHHHHHc--CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 167 LDPGDKIVDCPPTFTM-YEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++| .+++..+.|.. ....+... |++++.++.++++..+. .++ +++++|++++|+||||.+++.+++.++
T Consensus 118 ~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~ 190 (398)
T 2fyf_A 118 IDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-----QTD-PSVDVIAWAHNETSTGVAVAVRRPEGS 190 (398)
T ss_dssp CSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCC-TTCSEEEEESEETTTTEECCCCCCTTC
T ss_pred cCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-----ccc-CCCCEEEEeCcCCCcceecchHHhhhh
Confidence 9887 22334444421 22244555 88888888665444442 244 689999999999999999999988877
Q ss_pred HcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------------
Q 014594 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------------- 308 (422)
Q Consensus 244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--------------- 308 (422)
.|+++|+||+|..+..... +. +.++++.|+||.+|++| ++||+++++++++.+.+.
T Consensus 191 --~~~~vivD~a~~~~~~~~~----~~--~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (398)
T 2fyf_A 191 --DDALVVIDATSGAGGLPVD----IA--ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI 261 (398)
T ss_dssp --C-CEEEEECTTTTTTSCCC----GG--GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred --cCCeEEEEeccccCCcccC----cc--cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence 6999999999987653211 11 13478899999999775 699999999998877432
Q ss_pred --------cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc---C-CCce-EEEEEeCC
Q 014594 309 --------KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY---P-SYSN-FILCEVTS 371 (422)
Q Consensus 309 --------~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p-~~~~-f~~~~~~~ 371 (422)
...++.+...+.++.++|+. .++++ .+++++++++++.+.|++++++.+. | ..++ ++|+++|+
T Consensus 262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T 2fyf_A 262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD 341 (398)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT
T ss_pred HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC
Confidence 12345677777777777754 12255 8889999999999999988545544 3 1345 89999987
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
+.+..++.+.|.++||.++++.....++++||+++ +.++++++.++|++
T Consensus 342 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 393 (398)
T 2fyf_A 342 DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDW 393 (398)
T ss_dssp TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHH
Confidence 77899999999988999987643223589999998 66677777777654
No 144
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=3.4e-30 Score=255.50 Aligned_cols=314 Identities=15% Similarity=0.130 Sum_probs=218.5
Q ss_pred CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..++..++|+..| .++++ ++|++.+++.+ +... ..|+.+...+++++++++++ .++|++++|++++++.+
T Consensus 61 d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a 138 (433)
T 1z7d_A 61 DVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETA 138 (433)
T ss_dssp ETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred ECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHH
Confidence 3456788999876 46777 88999999876 3221 23444456789999999997 57999999999999999
Q ss_pred HHHhc---------CCC-CEEEEcCCCchhHHHH-HHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594 163 MRCVL---------DPG-DKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP 219 (422)
Q Consensus 163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (422)
++.+. .+| |+|++.+|+|+.+... ....| ..++.+|. .|++++++.++.+++
T Consensus 139 l~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~ 213 (433)
T 1z7d_A 139 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNV 213 (433)
T ss_dssp HHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence 98653 467 9999999999865432 22233 24445543 389999999943678
Q ss_pred eEEEEeCCCCccCcCC----CHHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-cc
Q 014594 220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR 291 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~----~~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r 291 (422)
++|+++..+|++|.+. ..+++.++|+. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +| +|
T Consensus 214 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~---t~sK~l~-~G~~~ 289 (433)
T 1z7d_A 214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALS-GGHYP 289 (433)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred EEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE---EECcccc-CCCCC
Confidence 8887776677899865 45666666665 9999999999987643322 12222233333 8899998 89 99
Q ss_pred ceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEE
Q 014594 292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFI 365 (422)
Q Consensus 292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~ 365 (422)
+||+++++++++.+... ...|+.|+++++++.++|+..+..+..++++++++++.+.|+++ +.+...++.++|+
T Consensus 290 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~ 369 (433)
T 1z7d_A 290 ISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLC 369 (433)
T ss_dssp CEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEE
T ss_pred eEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEE
Confidence 99999999988776542 33477899999888888864211115667777788887777654 3222235678899
Q ss_pred EEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 366 LCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 366 ~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
++++++. .+..++.+.|.++||.++++. ++++||+++ +.++++++.++|+
T Consensus 370 ~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 370 AIEFKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIV 423 (433)
T ss_dssp EEEECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEccChhHHHHHHHHHHHCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHH
Confidence 9999753 468899999999999999863 589999875 4455555555544
No 145
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.97 E-value=2.6e-30 Score=258.34 Aligned_cols=319 Identities=13% Similarity=0.111 Sum_probs=225.1
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---C--CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---K--FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~--~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
.++++++|+.+| .++++ .+|++.+++.+ + . +. ..|+.+...+++++++++++.+.++|++++|++++++.
T Consensus 47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~ 126 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT 126 (459)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence 456789999887 56665 46889888865 2 2 11 13455557789999999998888899999999999999
Q ss_pred HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCC-----CCCCC--------H
Q 014594 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V 207 (422)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~ 207 (422)
+++.+++ ++++|++..|+|+.+...+...+. .+..++.+. ++ .| +
T Consensus 127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~ 205 (459)
T 4a6r_A 127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA 205 (459)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence 9998875 569999999999877655544322 233333211 12 45 7
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
++|++.+.+ +++++|+++.++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+++
T Consensus 206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~- 284 (459)
T 4a6r_A 206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF- 284 (459)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee-
Confidence 889888863 34566666666677777665 5666666765 9999999999988654422 22233333333
Q ss_pred EccChhhhccccccceeeecCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHccC---ChHHH-HH-HHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLE-VK-EALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~-~~~~~~~~~l~~ 347 (422)
+|||.++.+|+|+||+++++++++.+.. ...+|+.++++++++.++|+. +++.+ .+ +.....++.|.+
T Consensus 285 --t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (459)
T 4a6r_A 285 --TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE 362 (459)
T ss_dssp --EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHH
T ss_pred --ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 6789987555999999999999998872 223578899999999999873 34444 44 555555666656
Q ss_pred HHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594 348 LLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA 413 (422)
Q Consensus 348 ~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~ 413 (422)
.|++++.+...+..|+|+++++..... ..++.+.|+++||.+++++ +++||++. +.+++++
T Consensus 363 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~ 437 (459)
T 4a6r_A 363 TFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDE 437 (459)
T ss_dssp HHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHH
T ss_pred HHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHH
Confidence 666666555566778899998863211 6778899999999999874 89999943 4555555
Q ss_pred HHHHHh
Q 014594 414 LMECLM 419 (422)
Q Consensus 414 l~~al~ 419 (422)
+.++|+
T Consensus 438 ~l~~l~ 443 (459)
T 4a6r_A 438 MLAVAE 443 (459)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 146
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=6.9e-31 Score=253.73 Aligned_cols=305 Identities=10% Similarity=0.025 Sum_probs=220.9
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhc-CCC-----------CCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeCCH-HHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGA-DELID 160 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~G~-~~al~ 160 (422)
+++++.|. .++++.+++++.+ +.. .++++.. ...++++++++++|++ +++|++|+|+ ++++.
T Consensus 4 ~~~~~~g~--~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~ 81 (360)
T 1w23_A 4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT 81 (360)
T ss_dssp CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred eEeecCCC--cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHH
Confidence 46666554 4778999999876 321 0112221 2568999999999986 5699999999 99999
Q ss_pred HHHHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHH-HhhcCCCeEEEEeCCCCccCcCC
Q 014594 161 LIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 161 ~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
.++.+++.+ ||.|+++.++|..+ ..++..| +++.++.+. ++.+|++++++ +++ +++|+|++++|+||||.++
T Consensus 82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-~~~k~v~~~~~~nptG~~~ 158 (360)
T 1w23_A 82 MLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-ENDAYLHITSNNTIYGTQY 158 (360)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-TTEEEEEEESEETTTTEEC
T ss_pred HHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCcCCccchHhhccC-CCCCEEEEeCCCCCcceec
Confidence 999988865 55677766666543 3456689 999999653 33589999998 885 7899999999999999999
Q ss_pred CHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc------
Q 014594 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------ 309 (422)
Q Consensus 236 ~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~------ 309 (422)
+ ++.+ +.|+++|+||+|..+..... . ... .++++|+||.+|++| +||+++++++++.+....
T Consensus 159 ~--~i~~--~~~~~li~D~a~~~~~~~~~-~---~~~--di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T 1w23_A 159 Q--NFPE--INHAPLIADMSSDILSRPLK-V---NQF--GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQY 226 (360)
T ss_dssp S--SCCC--CCSSCEEEECTTTTTSSCCC-G---GGC--SEEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCH
T ss_pred c--cccc--cCCceEEEechhhcCCCCcC-c---ccC--CEEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhh
Confidence 8 3333 34999999999987653211 1 122 278999999998666 899999998876554321
Q ss_pred -------C-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCC-ccc--CC--CceEEEEEeCCC
Q 014594 310 -------Q-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFL-NPY--PS--YSNFILCEVTSG 372 (422)
Q Consensus 310 -------~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~--p~--~~~f~~~~~~~~ 372 (422)
. ..+.+...+.++.++++. .++++ ++++++++++++.+.|++++.+ ... ++ .+.++|+++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (360)
T 1w23_A 227 ATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE 306 (360)
T ss_dssp HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH
T ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC
Confidence 1 124566666666666653 22566 8899999999999999988743 322 32 244899999754
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.+..++.+.|.++||.++++.. .++++||+++ +.++++++.++|++
T Consensus 307 ~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~~~~~~~~i~~~~~~l~~ 355 (360)
T 1w23_A 307 ELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIYNAVPIDACIALRELMIQ 355 (360)
T ss_dssp HHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHCCeeeecCCC--CCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 4567888888899999987653 3689999997 55666777776664
No 147
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=7.1e-30 Score=251.61 Aligned_cols=305 Identities=13% Similarity=0.093 Sum_probs=225.3
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCC--------C--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP--------D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~--------~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+.++|+.+.+. ++++.+.+++.+ +.....++ . ....++++++++++|+++++|++|+|+++++..++
T Consensus 27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al 105 (416)
T 1qz9_A 27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL 105 (416)
T ss_dssp TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence 356899988876 567778888765 22211111 1 23578999999999998899999999999999888
Q ss_pred HHhc------CCCCE-EEEcCCCchhHHHH----HHHc--CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594 164 RCVL------DPGDK-IVDCPPTFTMYEFD----AAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (422)
Q Consensus 164 ~~l~------~~gd~-Vl~~~p~y~~~~~~----~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (422)
++++ ++||+ |++..++|+.+... ++.. |++++.++. ++++++.++ +++++|++++|+||
T Consensus 106 ~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~-~~~~~v~~~~~~np 177 (416)
T 1qz9_A 106 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID-QDTAVVMLTHVNYK 177 (416)
T ss_dssp HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS-TTEEEEEEESBCTT
T ss_pred HhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC-CCceEEEEeccccC
Confidence 8776 89987 55556688754432 3334 999999985 788999987 68999999999999
Q ss_pred cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccc-eeeecCHHHHHHHHHh
Q 014594 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA 308 (422)
Q Consensus 231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~ 308 (422)
||.+++.+++.++++. |+++|+||+|..... +.... ..+.++++.|++|.++ +|.++ ||+++++++++.+...
T Consensus 178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~---~~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~~ 252 (416)
T 1qz9_A 178 TGYMHDMQALTALSHECGALAIWDLAHSAGAV-PVDLH---QAGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQP 252 (416)
T ss_dssp TCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-CCCHH---HHTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCCS
T ss_pred cccccCHHHHHHHHHHcCCEEEEEccccccCc-CCChh---hcCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCCC
Confidence 9999999999999987 999999999984221 11111 1234588899999864 67888 9999998877655431
Q ss_pred -------------------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccC-C--CCcc
Q 014594 309 -------------------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDV-P--FLNP 357 (422)
Q Consensus 309 -------------------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~-~--~~~~ 357 (422)
...++.+...+.++.++|+. .++++ .+++++++++++.+.|+++ + .+.+
T Consensus 253 ~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~ 332 (416)
T 1qz9_A 253 LSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL 332 (416)
T ss_dssp CCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred ccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence 11235677777766666653 23555 8889999999999999875 3 3443
Q ss_pred cCC-----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 358 YPS-----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 358 ~p~-----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
.++ .++++|++++ +..++.+.|.++||.+... .++++||+++ +.++++++.++|++
T Consensus 333 ~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~gi~~~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~ 397 (416)
T 1qz9_A 333 VTPREHAKRGSHVSFEHP---EGYAVIQALIDRGVIGDYR----EPRIMRFGFTPLYTTFTEVWDAVQILGE 397 (416)
T ss_dssp CSCSSGGGBCSEEEEECT---THHHHHHHHHTTTEECEEE----TTTEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred eCCCCHHHcCCEEEEecC---CHHHHHHHHHhCCcEeccC----CCCeEEEeCcccCCCHHHHHHHHHHHHH
Confidence 332 3678899986 3788999999999998653 2589999987 56666666666654
No 148
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=1.9e-29 Score=247.49 Aligned_cols=280 Identities=16% Similarity=0.153 Sum_probs=208.5
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~ 202 (422)
+++...++++++++++|.+ +.++++++++++..++++++++||+|+++.|+|+.+...+ +..|++++.++.+
T Consensus 62 ~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 137 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-- 137 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred CChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC--
Confidence 4556789999999999975 5566666779999999999999999999999999877665 7789999999853
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~ 281 (422)
|++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+.... .. ..+.++++.|+
T Consensus 138 ---d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~s~ 208 (398)
T 2rfv_A 138 ---KPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ-PL----QLGADIVVHSV 208 (398)
T ss_dssp ---SHHHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEET
T ss_pred ---CHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEEeC
Confidence 8999999997 689999999999999999999999999987 99999999999766432 11 23467999999
Q ss_pred hhhhccccccc-eeeecCHHHHH-HHHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--
Q 014594 282 SKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF-- 354 (422)
Q Consensus 282 SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-- 354 (422)
||.++.+|+|+ ||+++++++++ .+..... .++.+++.+.++.++|+.. ....+++.++.+.+.+.|++.+.
T Consensus 209 sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~v~ 286 (398)
T 2rfv_A 209 TKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL--GIRMERHCENALKIARFLEGHPSIT 286 (398)
T ss_dssp TTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred cccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHHHHHcCCCee
Confidence 99998899998 99999998887 5553332 3578889999999888652 12445566677777777766431
Q ss_pred ------------Cccc----CCCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594 355 ------------LNPY----PSYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK---------------------- 395 (422)
Q Consensus 355 ------------~~~~----p~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~---------------------- 395 (422)
+.+. ...++++++++++. .+...+.+.+...|+.+++|..+
T Consensus 287 ~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~ 366 (398)
T 2rfv_A 287 RVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKA 366 (398)
T ss_dssp EEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHT
T ss_pred EEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence 1111 13577888898631 12223333333346766666321
Q ss_pred C-CCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 396 E-LKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 396 ~-~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
+ .++++|||++. .+++++|.++++++
T Consensus 367 g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 367 GITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 16899999985 44456666666543
No 149
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=4.2e-30 Score=256.20 Aligned_cols=310 Identities=16% Similarity=0.160 Sum_probs=220.6
Q ss_pred CCeEEcCCC-CCCCCCCHHHHHHHhcC-----CC-CCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 95 EDIVKIDAN-ENPYGPPPEVREALGQL-----KF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-----~~-~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
.++|.++.+ ++.++.++.+.++.... .. .+.| +++...++++.+++++|.+ ++++++|+++++..++.
T Consensus 89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~ 166 (464)
T 1ibj_A 89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH 166 (464)
T ss_dssp HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT
T ss_pred CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH
Confidence 346788876 66677777776665531 11 2345 3344567899999999864 77778888999998886
Q ss_pred HhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 165 CVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
++++||+|+++.|+|+.+... ++..|++++.++.+ |+++++++++ +++++|++++|+||||.+++.+++
T Consensus 167 -~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~-~~tk~v~l~~p~NptG~v~~l~~i 239 (464)
T 1ibj_A 167 -LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKI 239 (464)
T ss_dssp -TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHH
T ss_pred -HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-cCceEEEEeCCCCCCCEeecHHHH
Confidence 889999999999999988653 45689999999853 8999999997 789999999999999999999999
Q ss_pred HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecC-HHHHHHHHHhc--CCCCCc
Q 014594 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAK--QPYNVS 315 (422)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~-~~~~~~l~~~~--~~~~~~ 315 (422)
.++|+. |+++|+||+|...... ... ..++++++.|+||.++. +|+|+||++++ +++++.+.... ..++.+
T Consensus 240 ~~la~~~gi~livDea~~~g~~~-~~~----~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~ 314 (464)
T 1ibj_A 240 SEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLA 314 (464)
T ss_dssp HHHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHcCCEEEEECCCcccccC-Chh----hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCC
Confidence 999987 9999999999853211 111 24678999999998864 48999999998 47888887655 346678
Q ss_pred HHHHHHHHHHccCCh-HHH-HHHHHHHHHHHHH----------HHHccCCCCcccCC----CceEEEEEeCCCCC-HHHH
Q 014594 316 VAAEVAACAALQNPI-YLE-VKEALIKERERLF----------KLLKDVPFLNPYPS----YSNFILCEVTSGMD-AKKL 378 (422)
Q Consensus 316 ~~~~~aa~~~L~~~~-~~~-~~~~~~~~~~~l~----------~~L~~~~~~~~~p~----~~~f~~~~~~~~~~-~~~~ 378 (422)
++.+.++.++|+... ..+ ..+......+++. +.|++++.+.+.++ .+++++++++ +.+ .+.+
T Consensus 315 ~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~ 393 (464)
T 1ibj_A 315 PFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHL 393 (464)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHH
T ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHH
Confidence 888988888887532 122 2222222222222 12233333332222 3678999985 322 3457
Q ss_pred HHHHHhCCcEEEeCC------------C----------CC-CCCeEEEEecChhhHHHHHHHHhh
Q 014594 379 KDDLAKMGVMIRHYN------------N----------KE-LKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~------------~----------~~-~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+.|...||.++.|. . .+ .++++||+++. ++++++.+.|++
T Consensus 394 ~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-edi~~li~~L~~ 457 (464)
T 1ibj_A 394 VETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-EDVDDLISDLDI 457 (464)
T ss_dssp HHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS-SCHHHHHHHHHH
T ss_pred HHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC-CCHHHHHHHHHH
Confidence 777777888887764 1 01 25799999998 667777777664
No 150
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=1.6e-29 Score=251.01 Aligned_cols=314 Identities=13% Similarity=0.057 Sum_probs=228.4
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
..+++.++|+..|. ++++ .+|++.+++.+ +... ..|+.+...++++.++++++ .++|++++|++++++.+
T Consensus 72 d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a 149 (439)
T 2oat_A 72 DVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETA 149 (439)
T ss_dssp ETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred ECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHH
Confidence 34567899998874 4566 88999999876 3221 22444457899999999997 57999999999999999
Q ss_pred HHHhc---------CCC-CEEEEcCCCchhHHH-HHHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594 163 MRCVL---------DPG-DKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP 219 (422)
Q Consensus 163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (422)
++.+. .+| |+|++.+|+|+.+.. .....| ..++.+|. .|++++++.++.+++
T Consensus 150 l~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~ 224 (439)
T 2oat_A 150 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNV 224 (439)
T ss_dssp HHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence 99764 357 899999999976533 333334 45666663 389999999953577
Q ss_pred eEEEEeCCCCccCcCC----CHHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-cc
Q 014594 220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR 291 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~----~~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r 291 (422)
++|+++..+|++|.+. ..+++.++|+. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +| +|
T Consensus 225 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~---t~sK~l~-~G~~~ 300 (439)
T 2oat_A 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP 300 (439)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE---Eeccccc-CCCCC
Confidence 8887766667899765 46666666665 9999999999877643322 12222223333 8999998 68 99
Q ss_pred ceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEE
Q 014594 292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILC 367 (422)
Q Consensus 292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~ 367 (422)
+||+++++++++.+... ...|+.|++++.++.++|+..+..+..++++++++++.+.|++++... ..++.|+|+++
T Consensus 301 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v 380 (439)
T 2oat_A 301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAI 380 (439)
T ss_dssp CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEE
T ss_pred eEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEE
Confidence 99999999988776542 334778999999888888642211267788899999999998874221 23467889999
Q ss_pred EeCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 368 EVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 368 ~~~~~--~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
++++. .+..++.+.|.++||.+.++. ++++||+++ +.++++++.++|+
T Consensus 381 ~l~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~ 433 (439)
T 2oat_A 381 VIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIIN 433 (439)
T ss_dssp EECCCSSCCHHHHHHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEecCccHHHHHHHHHHHHCCeEEecCC----CCEEEEECccCCCHHHHHHHHHHHH
Confidence 99754 468899999999999999853 589999875 3445555555544
No 151
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=4.6e-30 Score=255.81 Aligned_cols=318 Identities=16% Similarity=0.140 Sum_probs=224.3
Q ss_pred CCCCeEEcCCCC--CCCCC-CHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594 93 KPEDIVKIDANE--NPYGP-PPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (422)
Q Consensus 93 ~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~~~----~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~ 163 (422)
.+..++|+..+. ++++. +|++.+++.+ +... . .|+.+...++++.++++++.++++|++|+|++++++.++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al 127 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAV 127 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHH
Confidence 456788987664 45543 7999999876 3321 1 455555678999999999877889999999999999999
Q ss_pred HHhcC--------CCCEEEEcCCCchhHHH-HHHHcCC------------EEEEecCCCCC-----CCC--------HHH
Q 014594 164 RCVLD--------PGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSDF-----SLN--------VEL 209 (422)
Q Consensus 164 ~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~-----~~d--------~~~ 209 (422)
+.+.. ++|+|++.+|+|+.+.. .....|. .+..++.+..+ ++| +++
T Consensus 128 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 207 (449)
T 3a8u_X 128 KMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence 97764 67999999999986533 3333331 23444422211 256 999
Q ss_pred HHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEc
Q 014594 210 IADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLR 279 (422)
Q Consensus 210 l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~ 279 (422)
|++.+++ +++++|+++..+|+||.+.+ .+++.++|+. |+++|+||+|.+|...+. .........+++
T Consensus 208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--- 284 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--- 284 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE---
Confidence 9999864 35666665555578998887 7888888877 999999999987764332 223333233433
Q ss_pred cChhhhcccc-ccceeeecCHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~-----------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
||||.++ +| +|+||+++++++++.+... ...++.+++++.++.++|+..+..+..++++++++++.+
T Consensus 285 s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~ 363 (449)
T 3a8u_X 285 CIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEK 363 (449)
T ss_dssp EECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred EEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8899998 57 9999999999999888753 124677899998888888642111166777888888888
Q ss_pred HHccCCCC---cccCCCceEEEEEeCCCC-----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594 348 LLKDVPFL---NPYPSYSNFILCEVTSGM-----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 416 (422)
Q Consensus 348 ~L~~~~~~---~~~p~~~~f~~~~~~~~~-----~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 416 (422)
.|++++.. ...++.++|+|+++++.. +..++.+.|.++||.++++. +++||++. +.++++++.+
T Consensus 364 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~l~ 438 (449)
T 3a8u_X 364 ALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRLFD 438 (449)
T ss_dssp HHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-----CEEEEECCCcCCHHHHHHHHH
Confidence 88775322 223457889999997432 23378899998999999873 89999954 4555555555
Q ss_pred HHh
Q 014594 417 CLM 419 (422)
Q Consensus 417 al~ 419 (422)
+|+
T Consensus 439 ~l~ 441 (449)
T 3a8u_X 439 AVG 441 (449)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 152
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=5.9e-29 Score=248.22 Aligned_cols=314 Identities=13% Similarity=0.106 Sum_probs=218.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V 173 (422)
..++|+..+.++.+.++.+.+++.... ..| +.++..+||++++++++. +++++++|+++++..++++++++||
T Consensus 42 ~~ylD~~~~~~~~~~~~~~~~a~~~~~--~~y~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~al~~l~~~gd-- 115 (456)
T 2ez2_A 42 DIYIDLLTDSGTNAMSDKQWAGMMMGD--EAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQ-- 115 (456)
T ss_dssp GCSEECSCSSSCCCCCHHHHHHHTTCC--CCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTC--
T ss_pred cceeeeccccCCccCCHHHHHHhhcch--hhcccChhHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhCCCCC--
Confidence 456899888888887898988887422 345 556789999999999986 4899999999999999999999999
Q ss_pred EEcCCCc-hhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcCCC----eEEEEeCCCC-ccCcCCCH
Q 014594 174 VDCPPTF-TMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKP----KCIFLTSPNN-PDGSIIND 237 (422)
Q Consensus 174 l~~~p~y-~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~----~~i~l~~p~N-PtG~~~~~ 237 (422)
+++.|+| ..+...+...|++++.++.+. ++.+|+++|++++++ ++ ++|++++|+| |||.+++.
T Consensus 116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p~n~ptG~~~~~ 194 (456)
T 2ez2_A 116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVTVNLAGGQPVSM 194 (456)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESSBTTTTSBCCCH
T ss_pred EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccccceeEEEEeccCCCCCCccCCH
Confidence 7888999 787888888999999998642 368899999999973 34 8999999999 99999996
Q ss_pred HHHHHHH---cC-CCeEEEccCCcc----------ccCCCchhh----hhhcCCcEEEEccChhhhccccccceeeec-C
Q 014594 238 EDLLKIL---EM-PILVVLDEAYTE----------FSGLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-P 298 (422)
Q Consensus 238 e~l~~i~---~~-~~~li~Deay~~----------~~~~~~~~~----~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~ 298 (422)
+++++|+ +. |+++|+||+|.. +.+.+.... ......+++++ |++|.. .+| |+||+++ +
T Consensus 195 ~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~~-~~~-~gG~~~~~~ 271 (456)
T 2ez2_A 195 ANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKDC-LVN-IGGFLCMND 271 (456)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTTT-CCS-SCEEEEESC
T ss_pred HHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcccC-CCC-ceeEEEECC
Confidence 5555554 43 999999999986 233332211 12233455555 778854 467 7899998 7
Q ss_pred HHHHHHHHHhcC-------CCCCcHHHHHH-HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC
Q 014594 299 LSIIEYLWRAKQ-------PYNVSVAAEVA-ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 370 (422)
Q Consensus 299 ~~~~~~l~~~~~-------~~~~~~~~~~a-a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~ 370 (422)
+++++.+..... ..+.+.....+ +.+.++.-+ .+..++.+++.+++.+.|++.+...+.|.+++|+|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~ 350 (456)
T 2ez2_A 272 DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDAR 350 (456)
T ss_dssp HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHH
T ss_pred HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhH
Confidence 888887764332 12233333333 333332111 124445566677888888776533345778899999873
Q ss_pred ---CCCCHHHH-----HHHH-HhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHh
Q 014594 371 ---SGMDAKKL-----KDDL-AKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLM 419 (422)
Q Consensus 371 ---~~~~~~~~-----~~~L-~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~ 419 (422)
.+.+.+++ .+.| .++||.+.+.+. ....+++||+++ +.++++++.++|+
T Consensus 351 ~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~ 425 (456)
T 2ez2_A 351 RFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGII 425 (456)
T ss_dssp HHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred HhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 24444555 7777 588998765221 122479999987 3444555555444
No 153
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=3.5e-30 Score=250.54 Aligned_cols=304 Identities=13% Similarity=0.086 Sum_probs=211.2
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl 174 (422)
+++++..++++.++++++++++.. +..|..-...+++.+++++|. +++++++++|+++++..+++++ +||+|+
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl 102 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNT----YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVI 102 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTS----TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEE
T ss_pred ceeeecccCCCCCCCHHHHHHHHH----hcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEE
Confidence 689999999899999999999972 111211234677777778887 3478999999999999999977 999999
Q ss_pred EcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeE-EEEeCCCCccC-cCCCHHHHHHHHcC-CC
Q 014594 175 DCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDG-SIINDEDLLKILEM-PI 248 (422)
Q Consensus 175 ~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~-i~l~~p~NPtG-~~~~~e~l~~i~~~-~~ 248 (422)
++.|+|+.+. ..++..|++++.+ .|++++++. + +++++ |++++|||||| ...+.+++.++++. |+
T Consensus 103 ~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~ 173 (374)
T 2aeu_A 103 HYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-DKDTLVIITGSTMDLKVIELENFKKVINTAKNKEA 173 (374)
T ss_dssp EECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTC
T ss_pred EecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCC
Confidence 9999775422 2567789999888 389999988 5 78999 99999999999 66666777777766 99
Q ss_pred eEEEccCCccccC---CC-chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC--CCcHHHHHHH
Q 014594 249 LVVLDEAYTEFSG---LE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAA 322 (422)
Q Consensus 249 ~li~Deay~~~~~---~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~--~~~~~~~~aa 322 (422)
++|+||+|..+.. .. +... .+.+++++|+||. ++|+|+||+++++++++.+......+ +++++.+.++
T Consensus 174 ~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~--l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 247 (374)
T 2aeu_A 174 IVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGI 247 (374)
T ss_dssp CEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHH
T ss_pred EEEEECCcccccccccccCCccc----cCCcEEEecCccc--ccCcceEEEEECHHHHHHHHHhhccccCCCCHHHHHHH
Confidence 9999999987641 11 1111 2345889999997 46789999999999999887765443 5688888888
Q ss_pred HHHccCChH--HH-HHHHHHHH----HHHHHHHHccC---CCCcc-cCCCceE-EEEEeCCCCC---HHHHHHHH-HhCC
Q 014594 323 CAALQNPIY--LE-VKEALIKE----RERLFKLLKDV---PFLNP-YPSYSNF-ILCEVTSGMD---AKKLKDDL-AKMG 386 (422)
Q Consensus 323 ~~~L~~~~~--~~-~~~~~~~~----~~~l~~~L~~~---~~~~~-~p~~~~f-~~~~~~~~~~---~~~~~~~L-~~~g 386 (422)
.++|+.... .+ ..+..+.. ++.+.+.|..+ ..+.+ .+..+.| .|.+.+...+ ..+++..+ .++|
T Consensus 248 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 327 (374)
T 2aeu_A 248 YRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYG 327 (374)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCC
Confidence 888875321 22 22222222 46666666654 12232 2233333 3444431111 12255454 4789
Q ss_pred cEEEeCCC-CCCCCeEEEEecChh----hHHHHHHHHhh
Q 014594 387 VMIRHYNN-KELKGYVRVSVGKPE----HTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~-~~~~~~iRis~~~~~----~~~~l~~al~~ 420 (422)
|.++++.. +..++++||+++... +++++.++++.
T Consensus 328 V~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~ 366 (374)
T 2aeu_A 328 IITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVE 366 (374)
T ss_dssp EECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHH
Confidence 99999865 345679999998532 25566666543
No 154
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=1.5e-28 Score=240.13 Aligned_cols=280 Identities=18% Similarity=0.175 Sum_probs=215.4
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 199 (422)
.+|++++..+++++++++++.+ +.|++++| ++++..+++.++++||+|+++.|+|+.... .++..|++++.++.
T Consensus 47 ~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 124 (386)
T 1cs1_A 47 SRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred eCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence 4567778899999999999976 66777665 899999999999999999999999986333 23567999999985
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
+ |++.+++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+..... . ..+.++++
T Consensus 125 ~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~----~~~~di~~ 193 (386)
T 1cs1_A 125 G-----DEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP-L----ALGADLVL 193 (386)
T ss_dssp T-----CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG-G----GGTCSEEE
T ss_pred C-----CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-c----ccCceEEE
Confidence 2 8999999997 689999999999999999999999999987 999999999998765321 1 23567999
Q ss_pred ccChhhhccccccc-eeeecCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G~r~-G~i~~~~-~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|+||.++.+|.|+ ||+++++ ++++.+...... ++.+++.+.++...++ ++. ..+.+.++++.+.+.|++++
T Consensus 194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~ 270 (386)
T 1cs1_A 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---TLVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_dssp EETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTCT
T ss_pred EcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999899887 9999986 788887765443 4467787777766664 344 66777888888888888765
Q ss_pred CCc-c-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014594 354 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-------------------- 395 (422)
Q Consensus 354 ~~~-~-~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-------------------- 395 (422)
.+. . .+ ..++++.+.+++ +.+.+.+.|.++||.++.....
T Consensus 271 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~ 348 (386)
T 1cs1_A 271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPE 348 (386)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHH
T ss_pred CeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--CHHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHH
Confidence 432 1 11 237788888863 3677888888999999842110
Q ss_pred ------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 396 ------ELKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 396 ------~~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
..++++||+++. .++++.|.++++.+
T Consensus 349 ~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 349 ARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 125899999986 33445555555543
No 155
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=1.1e-29 Score=253.36 Aligned_cols=319 Identities=13% Similarity=0.146 Sum_probs=229.5
Q ss_pred CCC--CeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 93 KPE--DIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 93 ~~~--~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+++ ++||+.+| .+.++ .+|++.+++.+ + .+. ..|+.+...+|+++++++++...++|++++|++++++.
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~ 150 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEV 150 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHH
Confidence 667 89999887 56665 68899888865 2 221 23455567899999999998777899999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC--------------EEEEecC--CCCCCCCHHHHHHHhhc-
Q 014594 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPR--KSDFSLNVELIADAVER- 216 (422)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~--~~~~~~d~~~l~~~i~~- 216 (422)
+++.+.. +| +.|++..++|+.+...+...+. .+..++. ......|+++|++.+++
T Consensus 151 Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~ 230 (457)
T 3tfu_A 151 AAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH 230 (457)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC
Confidence 9997764 55 5899999999766544443311 2222332 11112478999998863
Q ss_pred -CCCeEEEEeC-CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcc
Q 014594 217 -EKPKCIFLTS-PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGL 287 (422)
Q Consensus 217 -~~~~~i~l~~-p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~ 287 (422)
+++++|++++ ++||+|.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+..++++ ||||.++
T Consensus 231 ~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii---t~sK~l~- 306 (457)
T 3tfu_A 231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALT- 306 (457)
T ss_dssp GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-
T ss_pred CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE---EEChhhh-
Confidence 4678888887 8999999886 6667777776 9999999999988654322 23333344444 8899886
Q ss_pred cc-ccceeeecCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CCCc
Q 014594 288 AG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PFLN 356 (422)
Q Consensus 288 ~G-~r~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~ 356 (422)
+| +|+||+++++++++.+.. ...+|+.|+++++++.++|+..+..+..++++++++++.+.|+++ +.+.
T Consensus 307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~ 386 (457)
T 3tfu_A 307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVT 386 (457)
T ss_dssp TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEE
T ss_pred CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 45 799999999999998862 224578899999999988863110015556667777777777764 3333
Q ss_pred ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 357 ~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
..+..|+|+++++++..+..++.+.|+++||.++++. +++||++. +.++++++.++|++
T Consensus 387 ~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~~-----~~lRi~p~~~~t~eei~~~l~~L~~ 448 (457)
T 3tfu_A 387 DVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPFR-----NLVYAMPPYICTPAEITQITSAMVE 448 (457)
T ss_dssp EEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3456788999999866678999999999999999854 79999854 45555655555543
No 156
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=1.9e-30 Score=257.05 Aligned_cols=317 Identities=15% Similarity=0.108 Sum_probs=225.2
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++++++|+..+. ++++ .+|++.+++.+ +. ....||++...+|+++++++++ .+++|++++|++++++.+++.
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~ 128 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRL 128 (429)
T ss_dssp TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHH
Confidence 4577899998875 6676 58999998876 22 1245788888999999999997 678999999999999999987
Q ss_pred hcC--CCCEEEEcCCCchhHHHHHHH-cCCE--EEEecCCCCCC------------CCHHHHHHHhhc--CCCeEEEEeC
Q 014594 166 VLD--PGDKIVDCPPTFTMYEFDAAV-NGAA--VVKVPRKSDFS------------LNVELIADAVER--EKPKCIFLTS 226 (422)
Q Consensus 166 l~~--~gd~Vl~~~p~y~~~~~~~~~-~g~~--~~~v~~~~~~~------------~d~~~l~~~i~~--~~~~~i~l~~ 226 (422)
+.. ++++|++..|+|+.+...+.. .|.. ...++...... -|++++++.+++ +++++|+++.
T Consensus 129 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 3k28_A 129 ARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP 208 (429)
T ss_dssp HHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred HHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 654 568999999999754433222 2211 11122111110 189999998863 3566777766
Q ss_pred CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594 227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (422)
Q Consensus 227 p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~ 299 (422)
++|++|.+.+ .+++.++|+. |+++|+||+|.+| ..+.. ....+...+ +.||||.++ +|+|+||+++++
T Consensus 209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~ 283 (429)
T 3k28_A 209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD---LTCLGKVIG-GGLPVGAYGGKA 283 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS---EEEECGGGG-TTSCCEEEEECH
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc---eehhhhhhc-CCCCeEEEEEcH
Confidence 6777888887 7777788877 9999999999988 44322 122222233 347899998 699999999999
Q ss_pred HHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeC
Q 014594 300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT 370 (422)
Q Consensus 300 ~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~ 370 (422)
++++.+... ..+++.+++++.++.++|+..+ .+.+++++++++++.+.|+++ +.....+..++|+++.+.
T Consensus 284 ~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 362 (429)
T 3k28_A 284 EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFT 362 (429)
T ss_dssp HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESS
T ss_pred HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEe
Confidence 999887542 2357889999999999998755 237777888888887777653 544445667888888874
Q ss_pred CC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594 371 SG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM 419 (422)
Q Consensus 371 ~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~ 419 (422)
.. ....++.+.|+++||.++++. .+.+|+++.. .++++++.++|+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~ 421 (429)
T 3k28_A 363 DEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAE 421 (429)
T ss_dssp SSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHH
T ss_pred cCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHH
Confidence 21 114678888999999999875 4678988753 444555555444
No 157
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=1.7e-29 Score=251.68 Aligned_cols=319 Identities=15% Similarity=0.147 Sum_probs=210.1
Q ss_pred CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (422)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~ 162 (422)
.+++.++|+..+ .+.++ .+|++.+++.+ +... ..|+.+...+++++++++++...++|++++|++++++.+
T Consensus 41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~a 120 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIA 120 (448)
T ss_dssp TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHH
Confidence 356778999876 34454 47899988876 3322 223334467889999998877678999999999999999
Q ss_pred HHHhcC----CC----CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCC-----------CHHHH
Q 014594 163 MRCVLD----PG----DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSL-----------NVELI 210 (422)
Q Consensus 163 ~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------d~~~l 210 (422)
++.+.. +| |+|++..|+|+.+...+...+. .+..++.++.+.. |+++|
T Consensus 121 l~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 200 (448)
T 3dod_A 121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL 200 (448)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence 998765 44 9999999999876644433322 2234443333332 48899
Q ss_pred HHHhh--cCCCeEEEEeCCC-CccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEcc
Q 014594 211 ADAVE--REKPKCIFLTSPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT 280 (422)
Q Consensus 211 ~~~i~--~~~~~~i~l~~p~-NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S 280 (422)
++.++ ..++++|+++.++ |++|...+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+ +.+
T Consensus 201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---i~t 277 (448)
T 3dod_A 201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---LMA 277 (448)
T ss_dssp HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC---EEE
Confidence 99886 3456778777777 88887665 6666677765 9999999999988644322 122222233 336
Q ss_pred Chhhhcccc-ccceeeecCHHHHHHHHH-------h--cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594 281 FSKRAGLAG-LRVGYGAFPLSIIEYLWR-------A--KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF 346 (422)
Q Consensus 281 ~SK~~~~~G-~r~G~i~~~~~~~~~l~~-------~--~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~ 346 (422)
|||.++ +| +|+||+++++++++.+.. . ...++.++++++++.++|+. +++.+ .++..+..++.|.
T Consensus 278 ~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 356 (448)
T 3dod_A 278 AGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQ 356 (448)
T ss_dssp ECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred eccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 899998 59 599999999999998865 2 23478899999999998863 33444 4444555555555
Q ss_pred HHHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHH
Q 014594 347 KLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 415 (422)
Q Consensus 347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~ 415 (422)
+ +.+++.+...+..|.|+|+.+++..+ ..++.+.|+++||.++++. +++||+++...+.++++
T Consensus 357 ~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~iRi~~~~~~t~e~i~ 430 (448)
T 3dod_A 357 D-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELS 430 (448)
T ss_dssp H-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHH
T ss_pred H-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-----CEEEEECCCCCCHHHHH
Confidence 5 55565444445678899999864322 4788999999999998873 89999754322223444
Q ss_pred HHHhh
Q 014594 416 ECLMH 420 (422)
Q Consensus 416 ~al~~ 420 (422)
+++++
T Consensus 431 ~~l~~ 435 (448)
T 3dod_A 431 EMVAI 435 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 158
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5.5e-29 Score=244.95 Aligned_cols=279 Identities=16% Similarity=0.158 Sum_probs=211.9
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 200 (422)
+|+++...+|++++++++|. +++++++|+++++..++++++++||+|+++.|+|..+...+. ..|++++.++.+
T Consensus 77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 45667778999999999995 578999999999999999999999999999999998766553 489999999853
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+||+|........ . ..+.++++.
T Consensus 155 -----d~~~l~~ai~-~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-~----~~g~div~~ 223 (414)
T 3ndn_A 155 -----DLSQWERALS-VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQG-F----PLGVDVVVY 223 (414)
T ss_dssp -----CHHHHHHHTS-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCC-G----GGTCSEEEE
T ss_pred -----CHHHHHHhcC-CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCCeEec
Confidence 8999999997 689999999999999999999999999987 999999999984321111 1 234458899
Q ss_pred cChhhhcccc-ccceeeecCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|+||.++.+| +++|+++++++.+. .+..... ..+.++....++...+ +++. ..++..++++++.+.|++.+.
T Consensus 224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l---~~l~~r~~~~~~~a~~l~~~L~~~p~ 300 (414)
T 3ndn_A 224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL---ETLAIRVQHSNASAQRIAEFLNGHPS 300 (414)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999878 89999999988776 5553322 2345555555444444 4455 777788899999999988765
Q ss_pred Cc--ccCC----------------CceEEEEEeCCC-----CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014594 355 LN--PYPS----------------YSNFILCEVTSG-----MDAKKLKDDLAKMGVMIRHYNN----------------- 394 (422)
Q Consensus 355 ~~--~~p~----------------~~~f~~~~~~~~-----~~~~~~~~~L~~~gI~v~~~~~----------------- 394 (422)
+. .+|. .|.+++++++++ .+...|.+.|...++.+..|+.
T Consensus 301 v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 380 (414)
T 3ndn_A 301 VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGP 380 (414)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHH
T ss_pred EeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCH
Confidence 43 2332 477899999742 2355677777666666655442
Q ss_pred ------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 395 ------KELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 395 ------~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
...+++||||++.+. .+++.+.|++
T Consensus 381 ~~~~~~g~~~~~iRlsvG~e~-~~dli~dl~~ 411 (414)
T 3ndn_A 381 EGRAAIGLGDGVVRISVGLED-TDDLIADIDR 411 (414)
T ss_dssp HHHHHTTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence 113679999999765 4666666553
No 159
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=1.4e-29 Score=252.55 Aligned_cols=323 Identities=14% Similarity=0.133 Sum_probs=216.4
Q ss_pred CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CC---C-C-CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---F-P-YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~-~-~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.+||+..| .++++ .+|++.+++.+ +. + . ..|+.+...+|+++++++++.+ .++|++|+|++++++
T Consensus 60 d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 139 (453)
T 4ffc_A 60 DADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE 139 (453)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred eCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence 3456789999987 66776 48999888765 21 1 1 1245555678999999998754 579999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCC--------------EEEEecCC----CCCCCC--------HHHHHH
Q 014594 161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRK----SDFSLN--------VELIAD 212 (422)
Q Consensus 161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~----~~~~~d--------~~~l~~ 212 (422)
.+++.... .+++|++..++|+.+...+...+. .+..++.. +.++.+ ++.+++
T Consensus 140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 219 (453)
T 4ffc_A 140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET 219 (453)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence 99986542 458999999999866655443321 34555533 223343 356666
Q ss_pred HhhcCCCeEEEEeCCCCccC-cCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594 213 AVEREKPKCIFLTSPNNPDG-SIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 213 ~i~~~~~~~i~l~~p~NPtG-~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~ 284 (422)
.+. .+..+++++.|+|++| .+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+ +.||||.
T Consensus 220 ~i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd---i~t~sK~ 295 (453)
T 4ffc_A 220 QIG-AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD---IVTMAKG 295 (453)
T ss_dssp HTC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECGG
T ss_pred hcC-CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc---hHhhhhh
Confidence 664 3345555566666665 4444 5556666666 9999999999988644321 122222222 4478999
Q ss_pred hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc
Q 014594 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY 358 (422)
Q Consensus 285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~ 358 (422)
++. |+|+||+++++++++.+.... .+|+.|++++.++.++|+. +++.+ .++.....++.|.+.+++++.+...
T Consensus 296 ~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 374 (453)
T 4ffc_A 296 IAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV 374 (453)
T ss_dssp GGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred hcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 985 999999999999988776433 3578899999999998873 34444 4444444455555555556655455
Q ss_pred CCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 359 PSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 359 p~~~~f~~~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+..|+|+++++.. ..+..++.+.|+++||.++++.. .++++||+++...+.+++++++++
T Consensus 375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~ 441 (453)
T 4ffc_A 375 RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPPLVIGDDLLDEGITA 441 (453)
T ss_dssp EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 6678899998842 22367788899999999998753 247999986633223444444444
No 160
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=3.8e-29 Score=241.39 Aligned_cols=286 Identities=15% Similarity=0.044 Sum_probs=204.5
Q ss_pred CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC--EEEEcCCCchhHH---HHHHHcCCEEEEe
Q 014594 124 YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYE---FDAAVNGAAVVKV 197 (422)
Q Consensus 124 ~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~---~~~~~~g~~~~~v 197 (422)
..|+ +++..+|+++++++++.+ ..++++|+++++..++++++++|| .|+++.++|.... ..+...|++++.+
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~~~--~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v 118 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLGMD--DAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV 118 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred ccccCChHHHHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence 4564 357899999999999973 345557788899999999988888 6777777664332 2345679999999
Q ss_pred cCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc-CcCCCHHHHHHHHcC----CCeEEEccCCcccc---CCCchhhhh
Q 014594 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYTEFS---GLESRMEWV 269 (422)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~~----~~~li~Deay~~~~---~~~~~~~~~ 269 (422)
+. +++.+|+++++++. ++++|++++||||| |.+++.+++++|++. |+++|+||+|.... .+.+.....
T Consensus 119 ~~-~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 194 (357)
T 3lws_A 119 GA-ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA 194 (357)
T ss_dssp SC-TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred cC-CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence 85 45689999999873 38999999999998 999998877777653 99999999987211 112222222
Q ss_pred hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 014594 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAAEVAACAALQNPIYLEVKEALIKERERL 345 (422)
Q Consensus 270 ~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l 345 (422)
...+ +++.|+||.++.++ .||+++++++++.+.+.... .......+.++..+|++ +.+..+++.++++++
T Consensus 195 ~~~d--~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l 268 (357)
T 3lws_A 195 GLFD--SIYISFYKGLGGIA--GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL--RKDRMGQYYEQAKQL 268 (357)
T ss_dssp TTSS--EEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--HTTCHHHHHHHHHHH
T ss_pred hcCC--EEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 2222 44789999984333 29999999999988755422 12223334444455543 444334467888999
Q ss_pred HHHHccCCCCcc--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCCCC-CCCeEEEEecCh---hhHHHHHHH
Q 014594 346 FKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKP---EHTDALMEC 417 (422)
Q Consensus 346 ~~~L~~~~~~~~--~p~~~~f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~~~~-~~~~iRis~~~~---~~~~~l~~a 417 (422)
.+.|++++.+.+ .|+.++|+|++++.. .+.+++.+.|.++||.++++..+. ...++|++++.. .+.+++.++
T Consensus 269 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~a 348 (357)
T 3lws_A 269 AEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAG 348 (357)
T ss_dssp HHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHH
T ss_pred HHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHH
Confidence 999999866654 578899999999743 236788888999999999885432 234999998742 345788888
Q ss_pred Hhhh
Q 014594 418 LMHL 421 (422)
Q Consensus 418 l~~l 421 (422)
+++|
T Consensus 349 l~~l 352 (357)
T 3lws_A 349 FARL 352 (357)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 161
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=2.9e-28 Score=240.08 Aligned_cols=315 Identities=15% Similarity=0.104 Sum_probs=222.3
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC-------cchH----HHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD-------PESR----RLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~y~~-------~~~~----~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.++|..++++. +|++.+++.+.. +..+||. .... .+++.+++++|+++++|++++| ++++..
T Consensus 26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~ 102 (417)
T 3n0l_A 26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQG 102 (417)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHH
Confidence 458998888876 789999998632 2123332 1223 3455888999998878888888 799999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHHH---HHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYEF---DAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
++++++++||+|+++.|+|..+.. .... .+..++.++.++++.+|++++++.++++++++|++++|+| |.+++
T Consensus 103 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~ 180 (417)
T 3n0l_A 103 VYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID 180 (417)
T ss_dssp HHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC
T ss_pred HHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC
Confidence 999999999999999999976543 2222 3456677776677789999999999756899999888886 89999
Q ss_pred HHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCC-
Q 014594 237 DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY- 312 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~- 312 (422)
.+++.++|+. |+++|+||+|.. +.+.+.....+ ...++++.|+||.+ +|+|+||++++ +++++.+......+
T Consensus 181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~ 256 (417)
T 3n0l_A 181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF--PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGI 256 (417)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT--TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc--ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcc
Confidence 9999999988 999999999742 22111111111 12358899999976 78899999998 78888887765543
Q ss_pred --CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeC-CCCCHHHHHHHHHh
Q 014594 313 --NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVT-SGMDAKKLKDDLAK 384 (422)
Q Consensus 313 --~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~-~~~~~~~~~~~L~~ 384 (422)
+.+...+.++..++.. .++.+ .+++++++++++.+.|++.+ +.+.+ ..++++|+.++ .+.+.+.+.+.|.+
T Consensus 257 ~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 335 (417)
T 3n0l_A 257 QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRK-FKLVSDGTDNHLVLMSFLDREFSGKDADLALGN 335 (417)
T ss_dssp CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCceEEEEEcccCCCCHHHHHHHHHH
Confidence 4445555555544443 24445 88889999999999998865 33333 56778999885 35678889999999
Q ss_pred CCcEEEeCCCC------CCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 385 MGVMIRHYNNK------ELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 385 ~gI~v~~~~~~------~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
+||.++++..+ ...+.+|+++. ++++++++.++|++
T Consensus 336 ~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~ 384 (417)
T 3n0l_A 336 AGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIAD 384 (417)
T ss_dssp TTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence 99999865431 22467999975 24556666666553
No 162
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.96 E-value=1.1e-28 Score=239.48 Aligned_cols=297 Identities=15% Similarity=0.137 Sum_probs=222.5
Q ss_pred CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCchhHH
Q 014594 109 PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYE 184 (422)
Q Consensus 109 ~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~ 184 (422)
.++++++++.+ +.....+|.+...++|+++++++|.+ ++++++|+++++..+++++ +++||+|+++.|+|+.+.
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~ 88 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATA 88 (375)
T ss_dssp CCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHH
T ss_pred CCHHHHHHHHHHHHcCcccCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHH
Confidence 56889999887 33333446667889999999999975 8999999999999999999 899999999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC
Q 014594 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE 263 (422)
Q Consensus 185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~ 263 (422)
..++..|++++.++.+++..+|++++++.++ +++++|++++| ||.+.+.+++.++++. |+++|+||+|..+....
T Consensus 89 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 164 (375)
T 2fnu_A 89 NMLLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQ 164 (375)
T ss_dssp HHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred HHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeEC
Confidence 9999999999999976655799999999997 68999888876 9999999999999987 99999999998654211
Q ss_pred chhhhhhcCCcEEEEccCh--hhhccccccceeeec-C-HHHHHHHHHhcCC------------------CCCcHHHHHH
Q 014594 264 SRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-P-LSIIEYLWRAKQP------------------YNVSVAAEVA 321 (422)
Q Consensus 264 ~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~-~-~~~~~~l~~~~~~------------------~~~~~~~~~a 321 (422)
. ..+...+ .+.+.||| |.++. | +|++++ + +++++.+...... +..+.+...+
T Consensus 165 ~--~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 238 (375)
T 2fnu_A 165 N--KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSAL 238 (375)
T ss_dssp T--EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHH
T ss_pred C--eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHH
Confidence 1 1122222 37778888 98874 6 788877 4 7788877654321 1344444433
Q ss_pred HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----Cc-eEEEEEeCC-CC-CHHHHHHHHHhCCcEEEeC
Q 014594 322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YS-NFILCEVTS-GM-DAKKLKDDLAKMGVMIRHY 392 (422)
Q Consensus 322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~-~f~~~~~~~-~~-~~~~~~~~L~~~gI~v~~~ 392 (422)
+...+ ++++ ..++.+++++++.+.|++++.+.+.+. .. .++++.++. +. +.+++.+.|.++||.++..
T Consensus 239 ~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~ 315 (375)
T 2fnu_A 239 GLSQL---KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH 315 (375)
T ss_dssp HHHHH---TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCcccc
Confidence 33332 3455 788889999999999999855544322 22 345778763 23 6889999999999999832
Q ss_pred CCCC--------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 393 NNKE--------------L-------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 393 ~~~~--------------~-------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
..+. . .+++||+++ +.++++++.++|+.
T Consensus 316 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 367 (375)
T 2fnu_A 316 YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK 367 (375)
T ss_dssp CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 2110 1 268999998 56677777777664
No 163
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=2.1e-29 Score=252.32 Aligned_cols=322 Identities=13% Similarity=0.147 Sum_probs=225.3
Q ss_pred CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CC-CC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
+.+++++||+.+| .++++ .+|++.+|+.+ +. .. ..|+.+...+|.++++++++.+.++|++++|++++++
T Consensus 51 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 51 DSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND 130 (472)
T ss_dssp ETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 3457789999887 56675 57999988865 21 11 1345555678999999999877789999999999999
Q ss_pred HHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC------------EEEEecCCCCCC----CC--------HH
Q 014594 161 LIMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKSDFS----LN--------VE 208 (422)
Q Consensus 161 ~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~----~d--------~~ 208 (422)
.+++.+.. ++++|++..|+|+.+...+...+. .+..++.+..+. .| ++
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~ 210 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAR 210 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHH
Confidence 99998764 468999999999877655544333 244444222111 34 78
Q ss_pred HHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEE
Q 014594 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL 278 (422)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~ 278 (422)
+|++.+.+ +++++|+++.++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+. .....+..++++
T Consensus 211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~-- 288 (472)
T 3hmu_A 211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM-- 288 (472)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence 88888853 45677777777888898886 6777777776 999999999998865442 222233334443
Q ss_pred ccChhhhccccccceeeecCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHH-HHHHHHHHHHcc--
Q 014594 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALI-KERERLFKLLKD-- 351 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~-~~~~~l~~~L~~-- 351 (422)
+|||.++.+|+|+||+++++++++.+.. ...+|+.|+++++++.++|+..+..+..++++ ++.+++++.|++
T Consensus 289 -t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~ 367 (472)
T 3hmu_A 289 -TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT 367 (472)
T ss_dssp -EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG
T ss_pred -eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789988555999999999999998831 12357889999999999986321111455555 556666666554
Q ss_pred -CCCCcccCCCceEEEEEeCCCC------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHH
Q 014594 352 -VPFLNPYPSYSNFILCEVTSGM------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALM 415 (422)
Q Consensus 352 -~~~~~~~p~~~~f~~~~~~~~~------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~ 415 (422)
++.+...+..|+|+++++.... ...++.+.|+++||.+++++ +++||++ .+.++++++.
T Consensus 368 ~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l 442 (472)
T 3hmu_A 368 DHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEMF 442 (472)
T ss_dssp GSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHHH
T ss_pred cCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHH
Confidence 4444445667888888885321 15678889999999999874 8999994 3555566655
Q ss_pred HHHhh
Q 014594 416 ECLMH 420 (422)
Q Consensus 416 ~al~~ 420 (422)
++|++
T Consensus 443 ~~l~~ 447 (472)
T 3hmu_A 443 VRIRK 447 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 164
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=1.7e-27 Score=227.44 Aligned_cols=269 Identities=17% Similarity=0.127 Sum_probs=202.0
Q ss_pred HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHH
Q 014594 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVE 208 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~ 208 (422)
++++++++++|.+ +.+++++| ++++..++++++++||+|+++.|+|+.+...+ +..|++++.++. .|++
T Consensus 2 ~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~ 74 (331)
T 1pff_A 2 ALEGKIAKLEHAE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG 74 (331)
T ss_dssp HHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred hHHHHHHHHhCCC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHH
Confidence 6899999999975 55555555 89999999999999999999999999876554 458999999874 4789
Q ss_pred HHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (422)
Q Consensus 209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 286 (422)
++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+..... . ..++++++.|+||.++
T Consensus 75 ~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~~d~~~~s~~K~~~ 148 (331)
T 1pff_A 75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNP-L----DLGVDIVVHSATKYIN 148 (331)
T ss_dssp HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCG-G----GGTCSEEEEETTTTTS
T ss_pred HHHHhhc-CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCCh-h----hcCCcEEEEECccccC
Confidence 9999997 689999999999999999999999999976 899999999986543211 1 2456799999999999
Q ss_pred ccccc-ceeeecCH-HHHHHHHHhcCC-C--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC-------
Q 014594 287 LAGLR-VGYGAFPL-SIIEYLWRAKQP-Y--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP------- 353 (422)
Q Consensus 287 ~~G~r-~G~i~~~~-~~~~~l~~~~~~-~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~------- 353 (422)
.+|.| +||+++++ ++++.+...... + +.+++.+.++...++ +.. ..+...++.+.+.+.|++.+
T Consensus 149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 225 (331)
T 1pff_A 149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL---TLDMRVKRAAENAQKVAEFLHEHKAVKKVYY 225 (331)
T ss_dssp SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCTTCCCEEC
T ss_pred CCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc---hHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 99999 89999998 999988876655 3 567777777666664 223 44444555555555554321
Q ss_pred -------CCccc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-------------------------CCC
Q 014594 354 -------FLNPY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-------------------------KEL 397 (422)
Q Consensus 354 -------~~~~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-------------------------~~~ 397 (422)
...+. +..++++.+.++ +.+++.+.|.++||.++..+. .+.
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~ 302 (331)
T 1pff_A 226 PGLPDHPGHEIAKKQMKMFGSMIAFDVD---GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGL 302 (331)
T ss_dssp TTSTTSTTHHHHHHHCSSCCSEEEEECS---SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTC
T ss_pred CCCCCCccHHHHHhhCCCCceEEEEEEC---CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCC
Confidence 11111 124678888885 677888888899998876521 011
Q ss_pred -CCeEEEEecCh---hhHHHHHHHHhh
Q 014594 398 -KGYVRVSVGKP---EHTDALMECLMH 420 (422)
Q Consensus 398 -~~~iRis~~~~---~~~~~l~~al~~ 420 (422)
++++||+++.. ++++++.++++.
T Consensus 303 ~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 303 TDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 58999999853 445555555544
No 165
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=1.4e-27 Score=239.36 Aligned_cols=316 Identities=16% Similarity=0.102 Sum_probs=227.2
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC----cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPD----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~----~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l 166 (422)
.++.|+ +..+ ...|++.+++.+. ...+.|+. .| ..++++.+++++|++. .+++++|+++++..++.++
T Consensus 67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~ 143 (474)
T 1wyu_B 67 TFYPLG-SCTM-KYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILII 143 (474)
T ss_dssp SCCCBT-TTCC-CCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHH
T ss_pred Cccccc-cccc-cCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHH
Confidence 457777 4333 2335566666542 22233422 23 3456777777788764 4778899999998765543
Q ss_pred ----cCCCC-----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CC
Q 014594 167 ----LDPGD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-IN 236 (422)
Q Consensus 167 ----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~ 236 (422)
.++|| +|+++.|+|+.+...++..|++++.++.++++.+|+++|+++++ +++++|++++| ||||.+ .+
T Consensus 144 ~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-~~t~~v~~~~p-n~~G~~~~~ 221 (474)
T 1wyu_B 144 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNP-NTLGLFERR 221 (474)
T ss_dssp HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSS-CTTSCCCTT
T ss_pred HHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-CCceEEEEECC-CCCcccCCC
Confidence 35887 99999999999999999999999999987778899999999997 68999999998 689998 58
Q ss_pred HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc-c---ccceeeecCHHHHHHHHH-h--
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-G---LRVGYGAFPLSIIEYLWR-A-- 308 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G---~r~G~i~~~~~~~~~l~~-~-- 308 (422)
.+++.++++. |+++|+||+|..+..+.... ...+.++++.|++|.++.+ | .|+||+++++++++.+.. .
T Consensus 222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~ 298 (474)
T 1wyu_B 222 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVE 298 (474)
T ss_dssp HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEE
T ss_pred HHHHHHHHHHcCCEEEEeCchhhhhccCCCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeee
Confidence 9999999987 99999999997655322111 1224568889999998766 4 599999999988776541 0
Q ss_pred ------------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--E
Q 014594 309 ------------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--I 365 (422)
Q Consensus 309 ------------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~ 365 (422)
...++.+.+++.++..++.. .++++ ..+++.++++++.+.|++++ +.+......| +
T Consensus 299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 377 (474)
T 1wyu_B 299 RGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEF 377 (474)
T ss_dssp ECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCE
T ss_pred ccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEecCCCCcceEE
Confidence 01234577788888888764 34555 78889999999999998874 4432223333 5
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
+++++.+.+..++.+.|.++||.+.....+ ...+++||+++. .++++++.++|+.
T Consensus 378 ~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 378 VAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp EEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 667655678899999999999986321111 236899999984 5556666666654
No 166
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=1.8e-28 Score=242.69 Aligned_cols=316 Identities=17% Similarity=0.133 Sum_probs=216.3
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++++++|+..|. ++++ .+|++.+++.+ +... +.|+++...+|+++++++++ ++++|++++|++++++.+++.
T Consensus 49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~ 127 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRI 127 (427)
T ss_dssp TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 4567899999885 5665 58999998876 3322 33555667899999999998 688999999999999999953
Q ss_pred hc--CCCCEEEEcCCCchhHHHHHHHc-CC-------------------EEEEecCCCCCCCCHHHHHHHhhcC--CCeE
Q 014594 166 VL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------------AVVKVPRKSDFSLNVELIADAVERE--KPKC 221 (422)
Q Consensus 166 l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~ 221 (422)
.. ..+++|++..|+|+.+...+... |. .++.++. -|++++++.+++. ++++
T Consensus 128 a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~ 202 (427)
T 3fq8_A 128 MRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-----NDLEAVKALFAENPGEIAG 202 (427)
T ss_dssp HHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-----TCHHHHHHHHHHSTTTEEE
T ss_pred HHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-----CCHHHHHHHHHhCCCCEEE
Confidence 31 23478999999997543222111 11 1333332 1899999998752 6788
Q ss_pred EEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeee
Q 014594 222 IFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (422)
Q Consensus 222 i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~ 296 (422)
|++++++|++|.+.+ .+++.++|+. |+++|+||+|.+| ..+... .....+....+.||||.++ +|+|+||++
T Consensus 203 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~di~t~sK~~~-~G~~~G~~~ 279 (427)
T 3fq8_A 203 VILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPDLTTLGKIIG-GGLPVGAYG 279 (427)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCSEEEECGGGG-TTSSCEEEE
T ss_pred EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCChhhhhhhhh-CCcceEEEE
Confidence 888888889999999 8888888876 9999999999988 433221 1111111122458899999 899999999
Q ss_pred cCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594 297 FPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367 (422)
Q Consensus 297 ~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~ 367 (422)
+++++++.+... ..+++.++++++++.++|+ ++++.+ .++.....++.|.+.+.+++.....+..++|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 359 (427)
T 3fq8_A 280 GKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGF 359 (427)
T ss_dssp ECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEE
T ss_pred EcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEE
Confidence 999999887652 2346789999999998885 333333 3333334444444444444443334567889999
Q ss_pred EeCCC-CC------------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594 368 EVTSG-MD------------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 420 (422)
Q Consensus 368 ~~~~~-~~------------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 420 (422)
+++.. .. ..++.+.|.++||.++++.. ..+|+++. +.++++++.++|++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~ 422 (427)
T 3fq8_A 360 FFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAART 422 (427)
T ss_dssp ESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHH
Confidence 98642 11 45788899999999998762 35666654 34555555555543
No 167
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=4.6e-29 Score=248.71 Aligned_cols=324 Identities=15% Similarity=0.123 Sum_probs=213.9
Q ss_pred CCCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.++|+..+ .++++. +|++.+++.+ +.... .|+.+...+|++++++.++.. .++|++|+|++++++
T Consensus 57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 136 (451)
T 3oks_A 57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE 136 (451)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence 3456789999987 666754 7999988875 32211 234445678889999888753 579999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCC--------------EEEEecCCCCC-----CC--------CHHHHH
Q 014594 161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKSDF-----SL--------NVELIA 211 (422)
Q Consensus 161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~-----~~--------d~~~l~ 211 (422)
.+++.... .+++|++..++|+.+...+...+. .+..++....+ +. +++.++
T Consensus 137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (451)
T 3oks_A 137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI 216 (451)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence 99986653 448899999999876655443321 34555533110 12 244444
Q ss_pred HHhhc----CCCeEEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594 212 DAVER----EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (422)
Q Consensus 212 ~~i~~----~~~~~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~ 279 (422)
+.+.+ .++++|+ +.|.| ..|.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+++
T Consensus 217 ~~l~~~~~~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--- 292 (451)
T 3oks_A 217 TVIDKQIGADNLAAVV-IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--- 292 (451)
T ss_dssp HHHHHHTCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---
T ss_pred HHHHhhcCCCCEEEEE-EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee---
Confidence 44431 3344554 55554 4556555 6777777776 9999999999988644322 22222223333
Q ss_pred cChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
||||.++ +|+|+||+++++++++.+... ...|+.|+++++++.++|+. +++.+ .++.....++.|.+.+++++
T Consensus 293 t~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 371 (451)
T 3oks_A 293 VTAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDD 371 (451)
T ss_dssp EECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred eehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8899998 599999999999998877643 34578899999999998863 33344 44444444555555555566
Q ss_pred CCcccCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594 354 FLNPYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 354 ~~~~~p~~~~f~~~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+...+..|.|+++++. ...+..++.+.|+++||.++++.. .++++||+++...+.+++++++++|
T Consensus 372 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l 444 (451)
T 3oks_A 372 RIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPPLSIGDDLLNEGLDVL 444 (451)
T ss_dssp TEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred CeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 54445667889999883 222467788999999999998753 2479999866432234455555443
No 168
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=9.6e-27 Score=227.52 Aligned_cols=274 Identities=16% Similarity=0.146 Sum_probs=209.0
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 200 (422)
+|+++...++++++++++|.+ +.++++++++++..++++++++||+|+++.|+|+.+... ++..|++++.++.
T Consensus 55 ~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~- 131 (389)
T 3acz_A 55 RLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT- 131 (389)
T ss_dssp TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred CCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence 456677889999999999975 566677788999999998899999999999999875544 5778999999985
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+.... .. ..+.++++.
T Consensus 132 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-~~----~~~~di~~~ 201 (389)
T 3acz_A 132 ----SDVEKVKAAWK-PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-PL----ELGADIALH 201 (389)
T ss_dssp ----TCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GTTCSEEEE
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-cc----ccCCeEEEE
Confidence 48999999997 689999999999999999999999999988 99999999998765422 21 245679999
Q ss_pred cChhhhccccccc-eeeecCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G~r~-G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|+||.++.+|.|+ ||+++++ ++++.+..... ..+.++..+.++...|+. +. ..++..++.+.+.+.|++++.
T Consensus 202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 202 SVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQIHMENGLKVAKFLEQHEK 278 (389)
T ss_dssp ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999998 9999998 89888876553 345677777777777753 23 455566677777777766532
Q ss_pred Cc--------------cc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------------
Q 014594 355 LN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------------ 395 (422)
Q Consensus 355 ~~--------------~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~---------~~------------ 395 (422)
+. +. +..++++.+++++ .+++.+.|.+.||.++..+ .+
T Consensus 279 v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 355 (389)
T 3acz_A 279 IVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENI 355 (389)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHH
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHH
Confidence 21 00 1236788888862 5666677778899887631 11
Q ss_pred -----CCCCeEEEEecChhhHHHHHHHH
Q 014594 396 -----ELKGYVRVSVGKPEHTDALMECL 418 (422)
Q Consensus 396 -----~~~~~iRis~~~~~~~~~l~~al 418 (422)
..+++||||++..+ .+++.+.+
T Consensus 356 ~~~~g~~~~~iRlsvg~~~-~~~li~~l 382 (389)
T 3acz_A 356 MRKQGITPELVRISVGIEN-VDDIIADL 382 (389)
T ss_dssp HHHHTCCTTEEEEECCSSC-HHHHHHHH
T ss_pred HHhcCCCcCeEEEEeccCC-HHHHHHHH
Confidence 11579999999753 34444443
No 169
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=1.1e-28 Score=242.03 Aligned_cols=315 Identities=16% Similarity=0.118 Sum_probs=222.9
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-C-C-CCCCC-------CcchHHH----HHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-K-F-PYIYP-------DPESRRL----RAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~-~~~y~-------~~~~~~l----r~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
..++++ .+.+++ ++++++++.+. . . ..+|+ .+...++ |+++++++|.+++.+++++| ++++.
T Consensus 24 ~~~~~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~~ 99 (405)
T 2vi8_A 24 AKIELI-ASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQANM 99 (405)
T ss_dssp HSEECC-TTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHH
T ss_pred cceeec-cCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHHH
Confidence 344555 555666 79999999873 2 1 22222 1223344 46999999987555555666 99999
Q ss_pred HHHHHhcCCCCEEEEcCCCchhHHH-H--HHHcC--CEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594 161 LIMRCVLDPGDKIVDCPPTFTMYEF-D--AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (422)
.++++++++||+|+++.|+|+.+.. . ....| .+++.++.+ +++.+|++++++.+++.++++|++ +|+|. |..
T Consensus 100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~ 177 (405)
T 2vi8_A 100 AVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRI 177 (405)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSC
T ss_pred HHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-Ccc
Confidence 9999999999999999999976632 1 11223 478888754 567899999999997447898887 44543 577
Q ss_pred CCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcCC
Q 014594 235 INDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP 311 (422)
Q Consensus 235 ~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~~ 311 (422)
.+.+++.++|+. |+++|+||+|..+. ..+.....+. ...++++|+||.++ +.| ||+++++++++.+.....+
T Consensus 178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~ 252 (405)
T 2vi8_A 178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFP 252 (405)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccc--cCCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcc
Confidence 789999999987 99999999998432 1111111111 22388999999986 555 9999999999888776544
Q ss_pred CC---CcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHH
Q 014594 312 YN---VSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLA 383 (422)
Q Consensus 312 ~~---~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~ 383 (422)
+. .+.....++.++++. .++++ .+++++++++++.+.|++++.....| ..++++|++++. +.+..++.+.|.
T Consensus 253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 332 (405)
T 2vi8_A 253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLD 332 (405)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHHHHHH
Confidence 32 344455555566653 35666 88999999999999999885322333 468899999974 457889999999
Q ss_pred hCCcEEEeCCC------CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNN------KELKGYVRVSVGK-------PEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~------~~~~~~iRis~~~-------~~~~~~l~~al~~ 420 (422)
++||.++++.. ...++++||+++. .++++++.++|++
T Consensus 333 ~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 382 (405)
T 2vi8_A 333 EVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL 382 (405)
T ss_dssp HHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHH
Confidence 99999998752 2235789999984 6666666666654
No 170
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=1.2e-28 Score=243.73 Aligned_cols=312 Identities=19% Similarity=0.108 Sum_probs=217.1
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++..++||..|. ++++ ++|++.+++.+ +..+ +.|+.+...++++.++++++ .+++|++++|+++++..+++.
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~ 127 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRL 127 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 4567789998875 5555 58999998876 3222 34565557889999999986 678999999999999999985
Q ss_pred ---hcCCCCEEEEcCCCchhHHHHHHH--------------cCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594 166 ---VLDPGDKIVDCPPTFTMYEFDAAV--------------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (422)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~~--------------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (422)
+.+ ++.|++.+|+|+.+...+.. .|. .++.++. .|++++++.+++ .+++
T Consensus 128 ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 201 (424)
T 2e7u_A 128 ARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIA 201 (424)
T ss_dssp HHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred HHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEE
Confidence 444 57899999999865432211 122 3455542 389999998863 3455
Q ss_pred EEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccce
Q 014594 221 CIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293 (422)
Q Consensus 221 ~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G 293 (422)
+|+ ++|+| +||.+.+ .+++.++ +. |+++|+||+|.+|..+.. .....+...++ .||||.++ +|+|+|
T Consensus 202 ~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G 275 (424)
T 2e7u_A 202 AII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL---VTLGKILG-GGLPAA 275 (424)
T ss_dssp EEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE---EEECGGGG-TTSSCE
T ss_pred EEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch---hhhhhhhh-CCcceE
Confidence 555 55655 4898886 6777777 66 999999999998832221 11222223333 38999999 699999
Q ss_pred eeecCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCce
Q 014594 294 YGAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSN 363 (422)
Q Consensus 294 ~i~~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~ 363 (422)
|+++++++++.+... ..+|+.|++++.++.++|+..+..+ ..++++++++++.+.|+++ +.....++.|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 355 (424)
T 2e7u_A 276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGS 355 (424)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeece
Confidence 999999998877652 2346889999999988886422213 6667777778887777664 54333456788
Q ss_pred EEEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014594 364 FILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLMH 420 (422)
Q Consensus 364 f~~~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~ 420 (422)
|+|+++++. .+..++.+.|.++||.++++.. ..+|+++.. .++++++.++|++
T Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l~~ 422 (424)
T 2e7u_A 356 MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEALRK 422 (424)
T ss_dssp EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHHHH
Confidence 999998641 1255788889999999998752 457777543 4445555555543
No 171
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=2.4e-28 Score=244.46 Aligned_cols=280 Identities=15% Similarity=0.101 Sum_probs=210.0
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE---EEEcCCCchhHH----HHHHHcCCEE-----EEec
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK---IVDCPPTFTMYE----FDAAVNGAAV-----VKVP 198 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~~----~~~~~~g~~~-----~~v~ 198 (422)
..++++++++++|.++++|++|+|+++++++++++++++||. |+++.|+|+... ..++..|+++ ..++
T Consensus 113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 467999999999999999999999999999999999877654 999999998643 3566789875 2345
Q ss_pred CCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594 199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (422)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (422)
.++++.+|++++++++++ +++++|++++|+||||.+++.++|.++|+. |+++|+|++|....... .+...+.+
T Consensus 193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~----~~~~~~~D 268 (465)
T 3e9k_A 193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL----YLHDWGVD 268 (465)
T ss_dssp CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCC
T ss_pred CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC----chhhcCCC
Confidence 566778999999999963 478999999999999999999999999987 99999999998533211 11123445
Q ss_pred EEEccChhhhccccccceeeecCHHHHHHHHHhcC---------------------------CCCCcHHHHHHHHHHccC
Q 014594 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------------------------PYNVSVAAEVAACAALQN 328 (422)
Q Consensus 276 i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---------------------------~~~~~~~~~~aa~~~L~~ 328 (422)
+++.|++|.++.+..++|++++++++++.+..... ..+.+.....++.++++.
T Consensus 269 ~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 269 FACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 88899999884223368999999887654431110 114566666666666653
Q ss_pred C-h-HHH-HHHHHHHHHHHHHHHHccC----------CCCccc-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014594 329 P-I-YLE-VKEALIKERERLFKLLKDV----------PFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIR 390 (422)
Q Consensus 329 ~-~-~~~-~~~~~~~~~~~l~~~L~~~----------~~~~~~-p~----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~ 390 (422)
- + .++ ++++++++++++.+.|+++ +.+.+. |. .+++++++++ .+..++.+.|.++||.++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~ 426 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCD 426 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECE
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEe
Confidence 2 1 245 8889999999999999874 444443 33 3789999986 456789999999999998
Q ss_pred eCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 391 HYNNKELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 391 ~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
... ++++||+++ +.++++++.++|++
T Consensus 427 ~~~----~~~iRis~~~~~~t~edi~~~~~~l~~ 456 (465)
T 3e9k_A 427 KRN----PNGIRVAPVPLYNSFHDVYKFTNLLTS 456 (465)
T ss_dssp EET----TTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred cCC----CCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence 543 589999983 45566666666654
No 172
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=7.7e-28 Score=236.24 Aligned_cols=278 Identities=16% Similarity=0.160 Sum_probs=202.2
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecC
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 199 (422)
.+|++++..+||++++++++.+ +.|++++| ++++..+++ ++++||+|+++.|+|+..... ++..|++++.++.
T Consensus 62 ~r~~~p~~~~l~~~la~~~g~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 138 (403)
T 3cog_A 62 SRSGNPTRNCLEKAVAALDGAK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC 138 (403)
T ss_dssp ----CHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred cCCCCchHHHHHHHHHHHhCCC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence 4578888899999999999975 66777666 589999999 899999999999999864332 3468999999985
Q ss_pred CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-CeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (422)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (422)
+ |+++++++++ +++++|++++|+||||.+++.+++.++++. | +++|+||+|..+.... .. ..+.+++
T Consensus 139 ~-----d~~~l~~~i~-~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-~~----~~~~div 207 (403)
T 3cog_A 139 S-----KIKLLEAAIT-PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-PL----ALGADIS 207 (403)
T ss_dssp T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-TT----TTTCSEE
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-cc----ccCCeEE
Confidence 3 8999999997 689999999999999999999999999998 8 9999999999775422 11 1356799
Q ss_pred EccChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~ 352 (422)
+.|+||.++.+| .|+||++++ +++++.+...... ...+++.+.++...|+. +. ..++..++...+.+.|++.
T Consensus 208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 208 MYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---LHVRMEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcC
Confidence 999999998766 479999994 7888888765543 44688888888887764 23 4455556666666666544
Q ss_pred C--------------CCcccC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC---C----------C--C----
Q 014594 353 P--------------FLNPYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY---N----------N--K---- 395 (422)
Q Consensus 353 ~--------------~~~~~p----~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~---~----------~--~---- 395 (422)
+ ...+.+ ..+.++.+.+++ ..+++.+.|.+.||.++.. + . .
T Consensus 285 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~ 362 (403)
T 3cog_A 285 PWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG--TLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLK 362 (403)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS--CHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCH
T ss_pred CCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC--CHHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCH
Confidence 2 111111 236677778863 2356666677889876532 1 0 0
Q ss_pred ------CC-CCeEEEEecCh---hhHHHHHHHHhh
Q 014594 396 ------EL-KGYVRVSVGKP---EHTDALMECLMH 420 (422)
Q Consensus 396 ------~~-~~~iRis~~~~---~~~~~l~~al~~ 420 (422)
+. +++||||++.. +.+++|.++++.
T Consensus 363 ~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 363 NDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp HHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 11 57999999863 334455555543
No 173
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.96 E-value=5e-29 Score=247.23 Aligned_cols=312 Identities=17% Similarity=0.110 Sum_probs=218.9
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
.++++++||..+. ++++ .+|++.+++.+ +.. ...|+.+...++++.++++++ .+++|++++|++++++.+++.
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ 131 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRL 131 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 4567789998876 4554 68999998876 322 244566667889999999996 578999999999999999986
Q ss_pred ---hcCCCCEEEEcCCCchhHHHHHH--------------HcCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594 166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (422)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (422)
+. +++.|++..|+|+.+...+. ..|+ .++.++. .|++++++.+++ ++++
T Consensus 132 ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 205 (434)
T 2epj_A 132 ARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIA 205 (434)
T ss_dssp HHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEE
T ss_pred HHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEE
Confidence 44 45788888899976433211 1232 3555553 389999999864 3677
Q ss_pred EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhcccccccee
Q 014594 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~ 294 (422)
+|+++..+|+||.+.+ .+++.++|+. |+++|+||+|.+|..+.. .....+...+ +.||||.++. |+|+||
T Consensus 206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d---i~s~sK~l~~-G~~~G~ 281 (434)
T 2epj_A 206 GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD---IIVLGKIIGG-GFPVGA 281 (434)
T ss_dssp EEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS---EEEEEGGGGT-TSSCEE
T ss_pred EEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC---eeeecchhcC-Ccceee
Confidence 7776666678999887 6667777776 999999999998732221 1122222233 3488999984 999999
Q ss_pred eecCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCceE
Q 014594 295 GAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSNF 364 (422)
Q Consensus 295 i~~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f 364 (422)
+++++++++.+... ..+|+.|+++++++.++|+..+. + ..++++++++++.+.|+++ +.....++.|+|
T Consensus 282 v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 360 (434)
T 2epj_A 282 VAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESM 360 (434)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred eeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence 99999998877652 23467899999988888864221 2 6677777888888877764 543334567889
Q ss_pred EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594 365 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM 419 (422)
Q Consensus 365 ~~~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~ 419 (422)
+|+++++. .+..++.+.|.++||.++++.. ..+|+++.. .++++++.++|+
T Consensus 361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~ 425 (434)
T 2epj_A 361 MQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLR 425 (434)
T ss_dssp EEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHH
T ss_pred EEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHHH
Confidence 99999741 1356788999999999998752 457777543 444555555444
No 174
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=2.6e-27 Score=231.70 Aligned_cols=270 Identities=16% Similarity=0.127 Sum_probs=210.0
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (422)
+|+++...+++++++++++.+ ++++++|++++++.+++.++++||+|+++.|+|+.+...+ +..|.+++.++.+
T Consensus 62 r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 139 (392)
T 3qhx_A 62 RTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA 139 (392)
T ss_dssp TTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC
Confidence 346667889999999999964 7899999999999999999999999999999998766555 5579999999853
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+.... .. ..+.++++.
T Consensus 140 -----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~-~~----~~~~di~~~ 208 (392)
T 3qhx_A 140 -----DLDAVRAAIR-PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ-PL----SLGADVVLH 208 (392)
T ss_dssp -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GGTCSEEEE
T ss_pred -----CHHHHHHhhC-CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC-hH----HhCCcEEEE
Confidence 8999999997 689999999999999999999999999997 99999999998553221 11 224458999
Q ss_pred cChhhhcccc-ccceeeecC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 280 S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
|+||.++.+| +|+||++++ +++.+.+..... .+..++..+.++...++. +. ..++..++.+.+.+.|++++.
T Consensus 209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~ 285 (392)
T 3qhx_A 209 STTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT---LVLRMQRHSENAAAVAEFLAEHPA 285 (392)
T ss_dssp ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999998777 799999997 688887766544 356788888877777754 33 666778888888899988754
Q ss_pred Cc-c-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014594 355 LN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK-------------------- 395 (422)
Q Consensus 355 ~~-~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~-------------------- 395 (422)
+. + +| ..|.++++.++++ .+.+.+.+.|...|+.+..|+..
T Consensus 286 v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g 365 (392)
T 3qhx_A 286 ISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLE 365 (392)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCC
T ss_pred cceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcC
Confidence 32 1 22 1267889999742 34566777776666666544420
Q ss_pred CCCCeEEEEecChhh
Q 014594 396 ELKGYVRVSVGKPEH 410 (422)
Q Consensus 396 ~~~~~iRis~~~~~~ 410 (422)
..++.||||++.+..
T Consensus 366 ~~~~~iRlSvg~e~~ 380 (392)
T 3qhx_A 366 VPDDLVRLSVGIEDV 380 (392)
T ss_dssp CCTTEEEEECCSSCH
T ss_pred CCCCeEEEEeccCCH
Confidence 135789999997643
No 175
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=8.7e-28 Score=236.75 Aligned_cols=316 Identities=14% Similarity=0.119 Sum_probs=214.7
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCC------cc-----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPD------PE-----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~y~~------~~-----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+.+..+++. .+|++.+++.+ +... .+||. .. ....++.+++++++++++|++++| ++++..
T Consensus 31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~ 107 (420)
T 3gbx_A 31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA 107 (420)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence 34777777776 58999999976 3221 13322 11 123456888889988777777666 789999
Q ss_pred HHHHhcCCCCEEEEcCCCchhHH---HHHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMYE---FDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (422)
++++++++||+|+++.|+|..+. ..... .+...+.++.+.++.+|++++++++++.++++|++++|+||+ ..+
T Consensus 108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~ 185 (420)
T 3gbx_A 108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD 185 (420)
T ss_dssp HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC
T ss_pred HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC
Confidence 99999999999999999997632 11112 344666666667778999999999975579999999999874 788
Q ss_pred HHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH---HHHHHHHHhcCC
Q 014594 237 DEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---SIIEYLWRAKQP 311 (422)
Q Consensus 237 ~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~---~~~~~l~~~~~~ 311 (422)
.+++.++|+. |+++|+||+|.... +.+...... ...++++.|+||.++ |.+.||+++++ ++.+.+.....+
T Consensus 186 l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~ 261 (420)
T 3gbx_A 186 WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV--PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFP 261 (420)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST--TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCEEEEECCcchhceecccCCccc--ccCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCC
Confidence 9999999987 99999999986322 111111111 124488999999874 56679999987 788777665444
Q ss_pred C---CCcHHHHHHHHHHcc-C-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHH
Q 014594 312 Y---NVSVAAEVAACAALQ-N-PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLA 383 (422)
Q Consensus 312 ~---~~~~~~~~aa~~~L~-~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~ 383 (422)
+ +.+...+.++..++. . .++.+ .+++++++++++.+.|++.++..+.+ ..++++|+.++. +.+.+.+.+.|.
T Consensus 262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (420)
T 3gbx_A 262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALG 341 (420)
T ss_dssp ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHH
Confidence 2 333444444443332 2 34555 88899999999999998866433222 578899999864 567888888898
Q ss_pred hCCcEEEeCC------CCCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYN------NKELKGYVRVSVGK-------PEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~------~~~~~~~iRis~~~-------~~~~~~l~~al~~ 420 (422)
++||.+++.. .+...+.+||++.. .++++++.+++++
T Consensus 342 ~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~ 391 (420)
T 3gbx_A 342 RANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCD 391 (420)
T ss_dssp HTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHH
Confidence 9999999822 12234569999852 4556666666554
No 176
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=2.7e-27 Score=236.00 Aligned_cols=309 Identities=14% Similarity=0.035 Sum_probs=223.6
Q ss_pred CCCHHHHHHHhc-CCC-CCCC-CCcch----HHHHHHHHHHcCCCCCC-----EEEeCCHHHHHHHHHHHhcC-------
Q 014594 108 GPPPEVREALGQ-LKF-PYIY-PDPES----RRLRAALAKDSGLESDH-----ILVGCGADELIDLIMRCVLD------- 168 (422)
Q Consensus 108 ~~~~~v~~al~~-~~~-~~~y-~~~~~----~~lr~~la~~~~~~~~~-----i~~~~G~~~al~~~~~~l~~------- 168 (422)
.+++.+.+++.+ +.. ...| ..++. .++++.+++++|++.++ +++|+|+++++..++.++.+
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345788888875 322 1223 23343 35666678888987765 99999999999999887754
Q ss_pred -CC-----CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594 169 -PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 169 -~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~ 241 (422)
+| ++|+++. +|..+...++..|++++.++.++ ++.+|+++|+++++ +++++|++++|+||||.+.+.++|.
T Consensus 133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I~ 210 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFGVTYTGNYEFPQPLH 210 (452)
T ss_dssp HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBSCTTTCBBCCHHHHH
T ss_pred hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHH
Confidence 55 5899999 99999999999999999999765 68999999999997 6899999999999999999999999
Q ss_pred HHHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHH-HHHHHhc
Q 014594 242 KILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SII-EYLWRAK 309 (422)
Q Consensus 242 ~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~-~~l~~~~ 309 (422)
++++. ++++++|++|..+.. .+.....+...+.+.++.|++| |+++|.++||+++++ +++ +.+....
T Consensus 211 ~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~ 289 (452)
T 2dgk_A 211 DALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNV 289 (452)
T ss_dssp HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEE
T ss_pred HHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCc
Confidence 99976 899999999997642 1111111112234567788899 777899999999964 333 3331111
Q ss_pred CC-----------CCC---cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-C----CCceEEEEEe
Q 014594 310 QP-----------YNV---SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEV 369 (422)
Q Consensus 310 ~~-----------~~~---~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~f~~~~~ 369 (422)
.. ++. ..+.+.++...+.. +.++ +.+++.++++++.+.|++++.+.+. | ...+++.+++
T Consensus 290 ~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~ 368 (452)
T 2dgk_A 290 DYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKL 368 (452)
T ss_dssp CCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEE
T ss_pred cccCCCCCCcccCCCChhHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEe
Confidence 10 111 34455566665544 3344 8888999999999999998755543 3 4567888888
Q ss_pred CCC----CCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594 370 TSG----MDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 370 ~~~----~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~~ 420 (422)
++. .+..++.+.|.++||.++.+..+ ...+++||+++. .++++++.++|++
T Consensus 369 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~ 429 (452)
T 2dgk_A 369 KDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA 429 (452)
T ss_dssp CTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 642 35689999999999976543221 235699999985 4667777777754
No 177
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=4.8e-28 Score=245.35 Aligned_cols=281 Identities=14% Similarity=0.092 Sum_probs=213.1
Q ss_pred HHHHHHHHHcCCCC--CCE--EEeCCHHHHHHHHHHHhcCCC--------CEEEEcCCCchhHHHHHHHcCCEEEEecCC
Q 014594 133 RLRAALAKDSGLES--DHI--LVGCGADELIDLIMRCVLDPG--------DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200 (422)
Q Consensus 133 ~lr~~la~~~~~~~--~~i--~~~~G~~~al~~~~~~l~~~g--------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 200 (422)
++++++++++|.++ +++ ++|+|+++++..+++++.++| |+|+++.|+|..+...++..|++++.++.+
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~ 222 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD 222 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC
Confidence 45666688888764 678 999999999999999988776 899999999999999999999999999987
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-----Cc--hhhhhhcC
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKH 272 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~ 272 (422)
+++.+|+++|+++++ .++++|++++|+||||.+.+.++|.+||+. |+++|+||+|.+|... +. ........
T Consensus 223 ~~~~~d~~~Le~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~ 301 (514)
T 3mad_A 223 ADYRADVAAMREAIT-PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLE 301 (514)
T ss_dssp TTSCBCHHHHHHHCC-TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTST
T ss_pred CCCCCCHHHHHHHhc-cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCC
Confidence 788999999999997 689999999999999999999999999988 9999999999976531 00 00111223
Q ss_pred CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-------------CCCCcH---HHHHHHHHHccCChHHH-HH
Q 014594 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PYNVSV---AAEVAACAALQNPIYLE-VK 335 (422)
Q Consensus 273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------------~~~~~~---~~~~aa~~~L~~~~~~~-~~ 335 (422)
+.++++.|++|.+ .+|.++|+++++++.......... ..+.+. .++.++...+.. .+++ ..
T Consensus 302 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~-~~~~~~~ 379 (514)
T 3mad_A 302 GVTSVSADTHKYG-YGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGE-EGYLDAT 379 (514)
T ss_dssp TCCEEEECTTTTT-CCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CCcEEEECchhcc-CCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhH-HHHHHHH
Confidence 4568889999965 477899999987766543221110 112222 344444444433 3344 88
Q ss_pred HHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhH
Q 014594 336 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHT 411 (422)
Q Consensus 336 ~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~ 411 (422)
+++.++++++.+.|++++.+.+.....+++++..+ +.+..++.+.|.++||.+... ..++++|++++ ..+++
T Consensus 380 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~g~---~~~~~~Ri~~~~~~~~~e~i 455 (514)
T 3mad_A 380 RRILQAADRLKAGVRAIPSLKILGDPLWVIAVASD-ELNIYQVMEEMAGRGWRLNGL---HRPPAFHVALTLRHTEPGVV 455 (514)
T ss_dssp HHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECS-SSCHHHHHHHHHTTTCBCEEE---TTTTEEEEECCGGGGSTTHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCC-CCCHHHHHHHHHhcCCEeccC---CCCCeEEEEEecCCCCHHHH
Confidence 88999999999999998666654444567788764 568899999999999988432 23578999987 23556
Q ss_pred HHHHHHHhh
Q 014594 412 DALMECLMH 420 (422)
Q Consensus 412 ~~l~~al~~ 420 (422)
+++.++|++
T Consensus 456 ~~~l~~L~~ 464 (514)
T 3mad_A 456 DRFLADLQD 464 (514)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666553
No 178
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.96 E-value=6.2e-28 Score=239.02 Aligned_cols=320 Identities=15% Similarity=0.091 Sum_probs=212.0
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.++++++|+..+. ++++ .+|++.+++.+ +... ..||++...+|+++++++++ .+++|++++|++++++.+++
T Consensus 49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~ 127 (429)
T 4e77_A 49 DVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIR 127 (429)
T ss_dssp ETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHH
Confidence 34577899998875 4555 57999999876 3322 34677778899999999997 67899999999999999998
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHHH-c--CCEEEEecCCCCC------------CCCHHHHHHHhhc--CCCeEEEEe
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAAV-N--GAAVVKVPRKSDF------------SLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~--g~~~~~v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
... ..++.|++..+.|+.+...+.. . +......+...+. ..|++++++.+++ +++++|+++
T Consensus 128 ~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 207 (429)
T 4e77_A 128 LARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVE 207 (429)
T ss_dssp HHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEEC
T ss_pred HHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 543 3567899999999765542211 1 1111111111110 1289999999874 345555544
Q ss_pred CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (422)
Q Consensus 226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~ 298 (422)
..++++|.+.+ .+++.++|+. |+++|+||+|.+| ..+.. ....+...+ +.||||.++ +|+|+||++++
T Consensus 208 p~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~~ 282 (429)
T 4e77_A 208 PVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGGR 282 (429)
T ss_dssp SSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEEC
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC---eeeeccccc-CCCCeEEEEEC
Confidence 44455666666 7888888887 9999999999988 43321 222222233 348899998 89999999999
Q ss_pred HHHHHHHHH-----hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe
Q 014594 299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 369 (422)
Q Consensus 299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~ 369 (422)
+++++.+.. ...+|+.+++++.++.++|+ ++++.+ .++.....++.|.+.+.+++.....+..++|+++++
T Consensus 283 ~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~ 362 (429)
T 4e77_A 283 REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFF 362 (429)
T ss_dssp HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEEC
T ss_pred HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEE
Confidence 999988764 23357889999999988886 334444 444444444444444444565444566788999998
Q ss_pred CCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594 370 TSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 420 (422)
Q Consensus 370 ~~~~--------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 420 (422)
++.. +..++.+.|+++||.++++. ...+|+++. +.++++++.++|++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~ 424 (429)
T 4e77_A 363 TNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA----FEAGFMSLAHSNEDIQKTVNAARR 424 (429)
T ss_dssp CSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST----TSCEECCTTCCHHHHHHHHHHHHH
T ss_pred ccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC----CCCEEEeccCCHHHHHHHHHHHHH
Confidence 7431 12788899999999999875 245777654 44455555555543
No 179
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=7e-27 Score=230.63 Aligned_cols=303 Identities=15% Similarity=0.131 Sum_probs=220.4
Q ss_pred CCCCCC-CHHHHHHHhcC-C-CC-CCCCC-cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594 104 ENPYGP-PPEVREALGQL-K-FP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (422)
Q Consensus 104 ~~~~~~-~~~v~~al~~~-~-~~-~~y~~-~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V 173 (422)
.+.+++ ++++.+++.+. . .. ..|+. .| ..++++.+++++|++ ++++++|+++++..+++++ +++||+|
T Consensus 8 ~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd~V 85 (418)
T 2c81_A 8 WPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGDEV 85 (418)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 344443 68888887652 1 11 22532 23 678999999999975 5677777899999999999 8999999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (422)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li 251 (422)
+++.|+|..+...++..|++++.++.+. ++.+|++++++.++ +++++|+++ ||||...+.+++.++++. |+++|
T Consensus 86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li 161 (418)
T 2c81_A 86 IVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-DKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVI 161 (418)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-TTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEE
T ss_pred EECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-CCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEE
Confidence 9999999999999999999999999764 68899999999997 688998854 589999999999999987 99999
Q ss_pred EccCCcccc-CCCchhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcCC--------------CC
Q 014594 252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--------------YN 313 (422)
Q Consensus 252 ~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~--------------~~ 313 (422)
+||+|..+. +++...... . .+.+.|| ||.++. | |+||+++ ++++++.+...... +.
T Consensus 162 ~D~a~~~~~~~~~~~~~~~---~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (418)
T 2c81_A 162 EDCAQSHGSVWNNQRAGTI---G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM 235 (418)
T ss_dssp EECTTCTTCEETTEETTSS---S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred EECcccccCccCCEecccc---c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence 999999875 333222111 2 2677777 999986 8 9999999 47888877654322 11
Q ss_pred --------------CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCc--e---EEE-EEeCC
Q 014594 314 --------------VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYS--N---FIL-CEVTS 371 (422)
Q Consensus 314 --------------~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~--~---f~~-~~~~~ 371 (422)
++.+........+ ++++ ..++.+++++++.+.|++++.+.+. +..+ . +++ +.+++
T Consensus 236 ~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 312 (418)
T 2c81_A 236 QLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDP 312 (418)
T ss_dssp SEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECG
T ss_pred hccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcc
Confidence 1111111111222 2344 6777788899999999988655543 3332 2 233 77764
Q ss_pred ----CCCHHHHHHHHHhC-CcE---EEeCCCC-----------------------------CC-------CCeEEEEe--
Q 014594 372 ----GMDAKKLKDDLAKM-GVM---IRHYNNK-----------------------------EL-------KGYVRVSV-- 405 (422)
Q Consensus 372 ----~~~~~~~~~~L~~~-gI~---v~~~~~~-----------------------------~~-------~~~iRis~-- 405 (422)
+.+.+++.+.|.++ ||. ++++..+ .. .+.+||++
T Consensus 313 ~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~ 392 (418)
T 2c81_A 313 VKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAI 392 (418)
T ss_dssp GGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGG
T ss_pred ccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCc
Confidence 56889999999988 999 8876421 01 15899998
Q ss_pred --cChhhHHHHHHHHhhh
Q 014594 406 --GKPEHTDALMECLMHL 421 (422)
Q Consensus 406 --~~~~~~~~l~~al~~l 421 (422)
++.++++++.++++.+
T Consensus 393 ~~gt~edi~~~~~~l~~~ 410 (418)
T 2c81_A 393 LLAEPSHLSLLVDAVAEL 410 (418)
T ss_dssp GGSCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHH
Confidence 4777888888887653
No 180
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=2.8e-28 Score=238.46 Aligned_cols=311 Identities=14% Similarity=0.111 Sum_probs=221.7
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD 171 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd 171 (422)
.+++++..+.++++ +++.+++.+......| +.++..++|++++++++.+ ++++++|+++++..+++++ +++||
T Consensus 22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~~gd 97 (391)
T 3dr4_A 22 SDLPRISVAAPRLD--GNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIGPGD 97 (391)
T ss_dssp ------CCCCCCCC--SSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCCTTC
T ss_pred CCCceeccCCCCCC--HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 45678888887664 5667777653111234 4567899999999999965 8899999999999999999 89999
Q ss_pred EEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCe
Q 014594 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (422)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~ 249 (422)
+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ +++++|+ |+||||...+.+++.++++. |++
T Consensus 98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~ 173 (391)
T 3dr4_A 98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-PRTKAIM---PVHLYGQICDMDPILEVARRHNLL 173 (391)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-CCceEEE---EECCCCChhhHHHHHHHHHHcCCE
Confidence 99999999999999999999999999976 568899999999997 6888888 67899999999999999987 999
Q ss_pred EEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC----------------
Q 014594 250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP---------------- 311 (422)
Q Consensus 250 li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~---------------- 311 (422)
+|+|++|..+. +.+...... . .+.+.||||..+++|.+.|+++++ +++.+.+......
T Consensus 174 li~D~a~~~g~~~~~~~~~~~---~-di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 249 (391)
T 3dr4_A 174 VIEDAAEAVGATYRGKKSGSL---G-DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFN 249 (391)
T ss_dssp EEEECTTCTTCEETTEETTSS---S-SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCB
T ss_pred EEEECcccccceECCeeeccc---C-CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccc
Confidence 99999998643 222211111 1 267778773333455678998875 5577766544311
Q ss_pred CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-------Cc-eEEEEEeCC--CCCHHHHHH
Q 014594 312 YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-------YS-NFILCEVTS--GMDAKKLKD 380 (422)
Q Consensus 312 ~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-------~~-~f~~~~~~~--~~~~~~~~~ 380 (422)
+..+.+...++...+ +.++ ..++.+++++++.+.|++++ +.+.+. .. ..+++.+++ +.+.+++.+
T Consensus 250 ~~~~~l~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 325 (391)
T 3dr4_A 250 YRMTNIQAAIGLAQL---ERVDEHLAARERVVGWYEQKLARLG-NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIK 325 (391)
T ss_dssp CBCCHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHGGGT-TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHH
T ss_pred cCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCC-ccccCcCCCCCCcceeEEEEEEECCccchhHHHHHH
Confidence 233444443333333 2334 67778888889999998874 332222 12 235777775 678999999
Q ss_pred HHHhCCcEEEeCCCC-------------C-------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 381 DLAKMGVMIRHYNNK-------------E-------LKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 381 ~L~~~gI~v~~~~~~-------------~-------~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.|.++||.++++..+ . ..+.+||++. +.++++++.++|+++
T Consensus 326 ~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 326 DLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 999999999987521 0 1357999976 466677777777653
No 181
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=4.1e-27 Score=232.25 Aligned_cols=316 Identities=14% Similarity=0.138 Sum_probs=211.5
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCC------Ccc----hHH-HHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~------~~~----~~~-lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.++|..++++. +|++.+++.+ +. +..+|+ ... ..+ .++.++++++.+.. .++++|+++++..
T Consensus 33 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~v~~~~Gs~a~~~ 109 (425)
T 3ecd_A 33 SQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA-NVQPHSGAQANGA 109 (425)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred cceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc-eeecCchHHHHHH
Confidence 458998888877 7999999986 32 112222 111 122 34667788887542 3458888899999
Q ss_pred HHHHhcCCCCEEEEcCCCchh---HHHHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTM---YEFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++++++++||+|+++.|+|+. +.......|. +++.++.+ +++.+|++++++.+.++++++|++++|+|| ...
T Consensus 110 al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~ 187 (425)
T 3ecd_A 110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKL 187 (425)
T ss_dssp HHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCC
T ss_pred HHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcC
Confidence 999999999999999999976 2222223444 55666644 457899999999997568999999999995 577
Q ss_pred CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCC
Q 014594 236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY 312 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~ 312 (422)
+.+++.++|+. |+++|+||+|.. +.+.+........ ..+++.|+||.+ +|.|+||++++ +++.+.+.......
T Consensus 188 ~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~ 263 (425)
T 3ecd_A 188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPG 263 (425)
T ss_dssp CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCcc
Confidence 88999999987 999999999643 2222221111211 238899999986 67899999998 57777776654442
Q ss_pred ---CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHHh
Q 014594 313 ---NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLAK 384 (422)
Q Consensus 313 ---~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~~ 384 (422)
+.+...+.++..++.. .++.+ .+++++++++++.+.|++.++.... +..++++|+.+++ +.+.+.+.+.|.+
T Consensus 264 ~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (425)
T 3ecd_A 264 LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALER 343 (425)
T ss_dssp ---CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHH
Confidence 3444444444444432 34555 8888999999999999987643333 2567889999864 5578888899999
Q ss_pred CCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 385 MGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 385 ~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
+||.++++.. ....+++|+++. ..++++++.+++++
T Consensus 344 ~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 344 AGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp TTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 9999994432 223468999954 24566666666654
No 182
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1e-27 Score=237.38 Aligned_cols=277 Identities=17% Similarity=0.214 Sum_probs=205.3
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD 202 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 202 (422)
+++...++|+++++++|.+ +.|++++|+ ++++.++++++++||+|+++.|.|..+... ++..|++++.++.+
T Consensus 112 ~~~~~~~l~~~lA~l~g~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 187 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGAE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-- 187 (445)
T ss_dssp CCHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS--
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC--
Confidence 4556779999999999975 556665555 999999999999999999999999876553 44579999999853
Q ss_pred CCCCHHHHHHHhhcCCC-eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594 203 FSLNVELIADAVEREKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~-~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S 280 (422)
|+++++++++ +++ ++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... . . ..+.++++.|
T Consensus 188 ---d~~~l~~ai~-~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-~---~-~~g~Div~~S 258 (445)
T 1qgn_A 188 ---DVGALELALN-QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-A---L-ALGADLVLHS 258 (445)
T ss_dssp ---CHHHHHHHHH-HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-T---T-TTTCSEEEEC
T ss_pred ---CHHHHHHHhc-cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-c---c-ccCCEEEEEC
Confidence 8999999997 578 999999999999999999999999987 99999999998543211 1 1 2345689999
Q ss_pred Chhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC-
Q 014594 281 FSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL- 355 (422)
Q Consensus 281 ~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~- 355 (422)
+||.+|..| .++||+++++++++.+...... ...+++...++...++ .+. ..+++.++++++.+.|++++.+
T Consensus 259 ~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~l~~r~~~~~~~a~~l~~~L~~~p~v~ 335 (445)
T 1qgn_A 259 ATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKVR 335 (445)
T ss_dssp TTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred CcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 999988554 4799999999998888765443 2346665555555553 344 5666777889999999888654
Q ss_pred cc-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594 356 NP-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK---------------------- 395 (422)
Q Consensus 356 ~~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~---------------------- 395 (422)
.+ +| ..++++++.++++ .+...+.+.|...++.++.|+..
T Consensus 336 ~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~ 415 (445)
T 1qgn_A 336 HVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKY 415 (445)
T ss_dssp EEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTT
T ss_pred EEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhc
Confidence 22 33 2577889999742 12444555554345655544321
Q ss_pred C-CCCeEEEEecChhhHHHHHHHHhh
Q 014594 396 E-LKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 396 ~-~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
+ .++.||||++.+ +.++|.+.|++
T Consensus 416 g~~~~~iRlSvG~E-did~li~~L~~ 440 (445)
T 1qgn_A 416 GIMDNLVRFSFGVE-DFDDLKADILQ 440 (445)
T ss_dssp TCCSSEEEEECCSS-CHHHHHHHHHH
T ss_pred CCCCCeEEEEeccC-CHHHHHHHHHH
Confidence 1 247999999964 57888877765
No 183
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.96 E-value=8.3e-28 Score=241.00 Aligned_cols=320 Identities=15% Similarity=0.123 Sum_probs=222.9
Q ss_pred CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.+++++||+.+| .+.++ .+|++.+++.+ + .+.. .|+.+...+|.++++++++.+.++|++++|+++|++.
T Consensus 50 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 129 (476)
T 3i5t_A 50 TEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDS 129 (476)
T ss_dssp ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHH
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHH
Confidence 3456789999887 56676 58899988875 2 2211 3444556788888888887777899999999999999
Q ss_pred HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCC---CCCC--------HHH
Q 014594 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSD---FSLN--------VEL 209 (422)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~---~~~d--------~~~ 209 (422)
+++.+.. .+++|++..|+|+++...+...+.. +..++.... +..| +++
T Consensus 130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (476)
T 3i5t_A 130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE 209 (476)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence 9997753 3578999999998776655543322 222331111 1222 788
Q ss_pred HHHHhhc---CCCeEEEEeCCCCccCc-CCC---HHHHHHHHcC-CCeEEEccCCccccCCCch--hh-hhhcCCcEEEE
Q 014594 210 IADAVER---EKPKCIFLTSPNNPDGS-IIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--ME-WVKKHDNLIVL 278 (422)
Q Consensus 210 l~~~i~~---~~~~~i~l~~p~NPtG~-~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~-~~~~~~~~i~~ 278 (422)
|++.+.+ +++++|+++.++|++|. +++ .+++.++|+. |+++|+||+|.+|...+.. .. ..+..++++
T Consensus 210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~-- 287 (476)
T 3i5t_A 210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII-- 287 (476)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh--
Confidence 9888863 46788888888899997 445 5556666665 9999999999998654432 22 222233433
Q ss_pred ccChhhhcccc-ccceeeecCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL 348 (422)
Q Consensus 279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~-------~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~ 348 (422)
+|||.++ .| +|+|++++++++++.+... . .+|+.++++++++.++|+..+-.+..++++++.+++.+.
T Consensus 288 -t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~ 365 (476)
T 3i5t_A 288 -TFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAA 365 (476)
T ss_dssp -EECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred -hhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 5789998 58 9999999999999988653 1 457889999999999986421111566667777777777
Q ss_pred HccC---CCCcccCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594 349 LKDV---PFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT 411 (422)
Q Consensus 349 L~~~---~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~ 411 (422)
|+++ +.+...+..|.|+++++.... ....+.+.|+++||.+++.+ +++||++. +.+++
T Consensus 366 L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~i 440 (476)
T 3i5t_A 366 LASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQI 440 (476)
T ss_dssp HHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHH
T ss_pred HHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHHH
Confidence 7654 333345667888888886421 15678888999999999853 89999944 44444
Q ss_pred HHHHHHHh
Q 014594 412 DALMECLM 419 (422)
Q Consensus 412 ~~l~~al~ 419 (422)
+++.++|+
T Consensus 441 ~~~l~~l~ 448 (476)
T 3i5t_A 441 DEMVAIMR 448 (476)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 184
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=6.7e-27 Score=229.35 Aligned_cols=279 Identities=16% Similarity=0.147 Sum_probs=208.7
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (422)
+|+++...++++++++++|.+ +.++++++++++..++++++++||+|+++.|.|+.+...+ ...|++++.++.
T Consensus 61 r~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 137 (398)
T 1gc0_A 61 RISNPTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM- 137 (398)
T ss_dssp --CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-
T ss_pred CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence 346667889999999999975 5555666689999999999999999999999998776655 567999999884
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
.|++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+..... . ..+.++++.
T Consensus 138 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~----~~~~d~~~~ 207 (398)
T 1gc0_A 138 ----ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRP-L----ELGADLVVH 207 (398)
T ss_dssp ----TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCG-G----GGTCSEEEE
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCceEEEE
Confidence 38999999997 689999999999999999999999999998 999999999986543221 1 234568999
Q ss_pred cChhhhccccccc-eeeecCHHHHH-HHHHhc---CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594 280 TFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAK---QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 280 S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~---~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~ 353 (422)
|+||.++.+|.|+ ||++++++.++ .+.... ..++.+++.+.++.+.++. +. ..++..++.+.+.+.|++++
T Consensus 208 S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~ 284 (398)
T 1gc0_A 208 SATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQP 284 (398)
T ss_dssp ETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999998 99999988765 444332 2356788888888777753 34 66677778888888887754
Q ss_pred CCc--------------cc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC------------------
Q 014594 354 FLN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN------------------ 394 (422)
Q Consensus 354 ~~~--------------~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~---~~~------------------ 394 (422)
.+. +. +..++++.++++. +.+...+.+.+.|+.++. |+.
T Consensus 285 ~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~ 362 (398)
T 1gc0_A 285 QVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPE 362 (398)
T ss_dssp TEEEEEEC----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHH
T ss_pred CeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHH
Confidence 321 11 1357788888862 234566667788888875 211
Q ss_pred ----CC-CCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594 395 ----KE-LKGYVRVSVGK---PEHTDALMECLMHL 421 (422)
Q Consensus 395 ----~~-~~~~iRis~~~---~~~~~~l~~al~~l 421 (422)
.+ .+++||||++. .++++.|.++|+++
T Consensus 363 ~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 363 ERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 01 14899999986 34455556665543
No 185
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=1.7e-27 Score=239.15 Aligned_cols=317 Identities=14% Similarity=0.096 Sum_probs=222.2
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCC--CCCC-------cchHH----HHHHHHHHcCCCCCC----EEEeCCHH
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQL-KFPY--IYPD-------PESRR----LRAALAKDSGLESDH----ILVGCGAD 156 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~--~y~~-------~~~~~----lr~~la~~~~~~~~~----i~~~~G~~ 156 (422)
.+.|+|..++++ +++.+++++.+. ...+ +||. ....+ +++.+++++|+++++ |++++|+
T Consensus 44 ~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs- 120 (483)
T 1rv3_A 44 RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS- 120 (483)
T ss_dssp HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-
T ss_pred hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-
Confidence 356999888875 579999999873 2212 3432 12233 448888899987654 8888888
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcC--CEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT 225 (422)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (422)
+++..++.++++|||+|++++|.|..+.. .+...| .+++.++.+ +++.+|+++|++.++++++|+|++
T Consensus 121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~- 199 (483)
T 1rv3_A 121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA- 199 (483)
T ss_dssp HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-
T ss_pred HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-
Confidence 88888888899999999999998865532 122234 566666544 567899999999997568999999
Q ss_pred CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH---
Q 014594 226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--- 300 (422)
Q Consensus 226 ~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--- 300 (422)
+++||+ .+++.+++.+||+. |+++|+|++|.. +...+.....+. ...+++.|++|.+ .|+|.||++++++
T Consensus 200 ~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~div~~s~~K~l--~GprgG~i~~~~~~~~ 274 (483)
T 1rv3_A 200 GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HCHVVTTTTHKTL--RGCRAGMIFYRRGVRS 274 (483)
T ss_dssp CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TCSEEEEESSGGG--CCCSCEEEEEECSBCC
T ss_pred eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CCcEEEecCcccC--CCCCceEEEEcchhhh
Confidence 999999 99999999999987 999999999873 221111001111 2347889999976 6889999999764
Q ss_pred ------------HHHHHHHhcCC---CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-C
Q 014594 301 ------------IIEYLWRAKQP---YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-Y 361 (422)
Q Consensus 301 ------------~~~~l~~~~~~---~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-~ 361 (422)
+.+.+.....+ .+++.....+...+++. ..+++ .++++.++++++.+.|+++++..+.+. .
T Consensus 275 ~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 354 (483)
T 1rv3_A 275 VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSD 354 (483)
T ss_dssp -------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCC
Confidence 44444433222 33444444444444442 23445 888999999999999998853323332 2
Q ss_pred ceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594 362 SNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVGK-------PEHTDALMECLMH 420 (422)
Q Consensus 362 ~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~~-------~~~~~~l~~al~~ 420 (422)
..++|++++. +.+.+++.+.|.++||.++ ++.. ....+++||+++. .++++++.++|++
T Consensus 355 ~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~ 426 (483)
T 1rv3_A 355 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR 426 (483)
T ss_dssp SSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHH
Confidence 3678888853 5688889888989999999 7653 2246799999874 4566666666554
No 186
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=5.8e-26 Score=223.68 Aligned_cols=295 Identities=20% Similarity=0.230 Sum_probs=215.6
Q ss_pred CCCCCCHHHHHHHhcCCCCCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594 105 NPYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (422)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (422)
..++.++.+.+++.. ...+.|+ .+...+++++++++++.+ ++++++|+++++..++++++++||+|+++.|.|.
T Consensus 30 ~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~ 106 (412)
T 2cb1_A 30 YGFKTLEEGQERFAT-GEGYVYARQKDPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFG 106 (412)
T ss_dssp CCCSSHHHHHHHHHH-CCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCH
T ss_pred eecCChHHHHHHhcc-ccCcCcCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCch
Confidence 345556666666652 2234553 345789999999999964 8999999999999999999999999999999998
Q ss_pred hHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594 182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (422)
Q Consensus 182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay 256 (422)
..... ++..|++++.++. |+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|
T Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 107 QTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp HHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred hHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 65444 3347999999874 3899999997 689999999999999999999999999987 9999999999
Q ss_pred ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH----------------------------HHHHHHHHh
Q 014594 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL----------------------------SIIEYLWRA 308 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~----------------------------~~~~~l~~~ 308 (422)
..+....... ..+.++++.|+||.++.+|.|+|++++.+ ++.+.++..
T Consensus 180 ~~~~~~~~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~ 255 (412)
T 2cb1_A 180 GAAGALCRPL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTL 255 (412)
T ss_dssp GTTTTSCCGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHH
T ss_pred ccccccCCcc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHH
Confidence 8762111111 23567999999999988999999988633 445555543
Q ss_pred c-CC--CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-c-cC----------------CCceEEEE
Q 014594 309 K-QP--YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILC 367 (422)
Q Consensus 309 ~-~~--~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~f~~~ 367 (422)
. .. +..++.....+...++. +....++..++.+++.+.|.+.+.+. + .| ..+.++.+
T Consensus 256 ~~~~~g~~~~~~~a~~~~~~l~~--l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~ 333 (412)
T 2cb1_A 256 GLSLCGMALSPFNAYLLFQGLET--VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTL 333 (412)
T ss_dssp HTTTTCCCCCHHHHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEE
T ss_pred HHHhcCCCCChHHhHHHHcCCch--HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEE
Confidence 3 22 23455555555555532 22255566788899999998876554 3 13 24567888
Q ss_pred EeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------C-----------CCCeEEEEecCh---hhHHHHHHHH
Q 014594 368 EVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------E-----------LKGYVRVSVGKP---EHTDALMECL 418 (422)
Q Consensus 368 ~~~~~~~~~~~~~~L~~~gI~v~~~~---------~~------~-----------~~~~iRis~~~~---~~~~~l~~al 418 (422)
.+ + +.+.+.+.|.+.||.+ .++ .+ . .++.||+|++.. +++++|.++|
T Consensus 334 ~~--~-~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al 409 (412)
T 2cb1_A 334 DL--G-DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEAL 409 (412)
T ss_dssp EC--S-SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred Ee--C-CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 88 3 7788888888899998 653 11 0 158999999854 3445555555
Q ss_pred h
Q 014594 419 M 419 (422)
Q Consensus 419 ~ 419 (422)
+
T Consensus 410 ~ 410 (412)
T 2cb1_A 410 E 410 (412)
T ss_dssp H
T ss_pred h
Confidence 4
No 187
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.2e-27 Score=239.54 Aligned_cols=282 Identities=13% Similarity=0.102 Sum_probs=215.0
Q ss_pred HHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-
Q 014594 133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD-----PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS- 201 (422)
Q Consensus 133 ~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~- 201 (422)
++++.+++++|.+ ++++++++|+++++..+++++++ +| |+|+++.|+|..+...++..|++++.++.++
T Consensus 111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence 4566677778887 67999999999999999998865 56 8999999999999999999999999999776
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-------Cch-hhhhhcC
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-------ESR-MEWVKKH 272 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-------~~~-~~~~~~~ 272 (422)
++.+|+++|+++++ +++++|++++|+||||.+.+.++|.+||+. |+++|+|++|..+... +.. .......
T Consensus 191 ~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~ 269 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN-KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP 269 (497)
T ss_dssp TCSBCTTTTGGGCC-SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred cCcCCHHHHHHHHh-hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence 78899999999997 689999999999999999999999999987 9999999999854310 000 0111223
Q ss_pred CcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-CCCC------------Cc---HHHHHHHHHHccCChHHHHHH
Q 014594 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPYN------------VS---VAAEVAACAALQNPIYLEVKE 336 (422)
Q Consensus 273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-~~~~------------~~---~~~~~aa~~~L~~~~~~~~~~ 336 (422)
+.++++.|++|.+ .+|.++|+++++.+.+....... ..+. .+ ..++.++...+....+.+..+
T Consensus 270 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~ 348 (497)
T 3mc6_A 270 GVTSISCDTHKYG-FAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQ 348 (497)
T ss_dssp TCCEEEEETTTTT-CCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECchhhc-CCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHH
Confidence 4568888999954 47888999999876655432111 1111 11 344666666665444444888
Q ss_pred HHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHH
Q 014594 337 ALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTD 412 (422)
Q Consensus 337 ~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~ 412 (422)
+..++++++.+.|++ ++.+.+ .+..++++++..+ +.+..++.+.|.++||.++.+.. ++.+|++++ +.++++
T Consensus 349 ~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~ 424 (497)
T 3mc6_A 349 EIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK-TLNIHELSDRLSKKGWHFNALQK---PVALHMAFTRLSAHVVD 424 (497)
T ss_dssp HHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT-TTTHHHHHHHHHTTTCBCEECCS---SCCEEEECCTTTTCTHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC-CCCHHHHHHHHHhCCEEEecCCC---CCeEEEEEeCCCHHHHH
Confidence 889999999999999 565554 3566777777765 56889999999999999987653 347899887 566677
Q ss_pred HHHHHHhh
Q 014594 413 ALMECLMH 420 (422)
Q Consensus 413 ~l~~al~~ 420 (422)
++.++|++
T Consensus 425 ~~~~~L~~ 432 (497)
T 3mc6_A 425 EICDILRT 432 (497)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777664
No 188
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.6e-27 Score=231.43 Aligned_cols=305 Identities=15% Similarity=0.139 Sum_probs=223.6
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V 173 (422)
++++++.+.+++.+ +.+++.+. .....|+.++..++|++++++++.+ ++++++|+++++..+++++ +++||+|
T Consensus 7 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~~gd~v 81 (374)
T 3uwc_A 7 PYSYLERQFADIEP---YLNDLREFIKTADFTLGAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIGAGDEV 81 (374)
T ss_dssp CSCCHHHHTSSCHH---HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred eeeccccCCCCchH---HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCCCEE
Confidence 45777777776643 77777663 2223346778899999999999964 8899999999999999999 9999999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEE
Q 014594 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (422)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~ 252 (422)
+++.|+|+.+...++..|++++.++.++++.+|++++++.++ +++++|+ |+||||.+.+.+++.++++. |+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 82 ITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred EECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 999999999999999999999999987778899999999997 5788887 99999999999999999987 999999
Q ss_pred ccCCccccC-CCchhhhhhcCCcEEEEccCh--hhhccccccceeeecC-HHHHHHHHHhcCC--------------CCC
Q 014594 253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YNV 314 (422)
Q Consensus 253 Deay~~~~~-~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~--------------~~~ 314 (422)
||+|..+.. ........ .++++.|++ |.++.+|. .|+++++ +++.+.+...... +..
T Consensus 158 D~~~~~g~~~~~~~~~~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
T 3uwc_A 158 DACQTILGRINDKFVGSW----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRM 232 (374)
T ss_dssp ECTTCTTCEETTEETTSS----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBC
T ss_pred eCCCccCceeCCeecccc----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCC
Confidence 999986532 22111111 146777866 98875465 8888875 5677777654321 223
Q ss_pred cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Cccc--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCC
Q 014594 315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~~--p~~~--~f--~~~~~~~~~~~~~~~~~L~~~g 386 (422)
+.+...+....+ +.++ ..++.+++++++.+.|++++. +.+. +..+ .| +.+.. .+.+++.+.|.++|
T Consensus 233 ~~~~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~g 306 (374)
T 3uwc_A 233 DTIQAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---KYRDQLFQYLKDNG 306 (374)
T ss_dssp CHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---TTHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---CCHHHHHHHHHHCC
Confidence 444444433333 2334 777788888999999998875 4332 2222 22 22333 27889999999999
Q ss_pred cEEEeCCCC----------------CC-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNK----------------EL-------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~----------------~~-------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++++... .. .+.+||++. +.++++++.++|++
T Consensus 307 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 366 (374)
T 3uwc_A 307 IEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVRE 366 (374)
T ss_dssp BCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 999887510 00 168999876 45666666666654
No 189
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=6.3e-27 Score=229.18 Aligned_cols=297 Identities=14% Similarity=0.086 Sum_probs=214.9
Q ss_pred HHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594 111 PEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (422)
Q Consensus 111 ~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (422)
+++.+++.+......|+..| ..++|++++++++. +++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus 12 ~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~ 89 (394)
T 1o69_A 12 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI 89 (394)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH
T ss_pred HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH
Confidence 45666665521112234335 78999999999996 68999999999999999999 899999999999999999999
Q ss_pred HHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc-cccCCC
Q 014594 188 AVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLE 263 (422)
Q Consensus 188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~-~~~~~~ 263 (422)
+..|++++.++.++++.+|++++++.+++. ++++|++++ |||...+.+++.++++. |+++|+||+|. ++.+.+
T Consensus 90 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~ 166 (394)
T 1o69_A 90 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKN 166 (394)
T ss_dssp HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT
T ss_pred HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCC
Confidence 999999999998777889999999999743 799999886 89999999999999987 99999999998 343322
Q ss_pred chhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCCC----------------CcHHHHHHHHHHc
Q 014594 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYN----------------VSVAAEVAACAAL 326 (422)
Q Consensus 264 ~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~~----------------~~~~~~~aa~~~L 326 (422)
.... ...+ +.+.||||..+++|.|+||++++ +++++.+......+. .+.+...++...+
T Consensus 167 ~~~~---~~~~-~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l 242 (394)
T 1o69_A 167 KALG---TFGE-FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM 242 (394)
T ss_dssp EETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH
T ss_pred cccc---cccC-cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH
Confidence 2111 1112 45556644444567799999995 898888876543220 2333333333333
Q ss_pred cCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ce--EEEEEeCCC---------------------CCHHHH
Q 014594 327 QNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SN--FILCEVTSG---------------------MDAKKL 378 (422)
Q Consensus 327 ~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~--f~~~~~~~~---------------------~~~~~~ 378 (422)
++++ ..++++++++++.+.|+++ +.+.+.. ++ .+++.++.. .+.+++
T Consensus 243 ---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 317 (394)
T 1o69_A 243 ---EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKL 317 (394)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHH
Confidence 3455 7788899999999999887 3433331 34 367888632 267889
Q ss_pred HHHHHhCCcEEEeCCCC-----CCC---------------CeEEEEe---cChhhHHHHHHHHhhh
Q 014594 379 KDDLAKMGVMIRHYNNK-----ELK---------------GYVRVSV---GKPEHTDALMECLMHL 421 (422)
Q Consensus 379 ~~~L~~~gI~v~~~~~~-----~~~---------------~~iRis~---~~~~~~~~l~~al~~l 421 (422)
.+.|.++||.++++..+ ... ..+|+.. .+.++++++.++|+.+
T Consensus 318 ~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~ 383 (394)
T 1o69_A 318 IEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKS 383 (394)
T ss_dssp HHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999987431 111 2334333 3567788888887653
No 190
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.95 E-value=1.1e-27 Score=238.98 Aligned_cols=308 Identities=14% Similarity=0.087 Sum_probs=201.4
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~ 165 (422)
..+.+++||..+. ++++ ++|++.+++.+ +... ..|+..-..++.+.+++.++ .+++|++++|++++++.+++.
T Consensus 54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ 132 (453)
T 2cy8_A 54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRV 132 (453)
T ss_dssp TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 3456789998886 4444 68999999876 3322 23443344566666666666 678999999999999999997
Q ss_pred ---hcCCCCEEEEcCCCchhHHHHHHH-----------cCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCeEEE
Q 014594 166 ---VLDPGDKIVDCPPTFTMYEFDAAV-----------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIF 223 (422)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~ 223 (422)
+.++ +.|++.+|+|+.+...+.. .|. .++.++. .|++++++.+++ +++++|+
T Consensus 133 ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi 206 (453)
T 2cy8_A 133 ARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFI 206 (453)
T ss_dssp HHHHHCC-CEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEE
Confidence 5554 6788888999865543221 132 1333332 389999999864 3567776
Q ss_pred EeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeee
Q 014594 224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (422)
Q Consensus 224 l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~ 296 (422)
+++.+||||.+.+ .+++.++|+. |+++|+||+|.+| ..+.. ....+...++ .||||.++ +|+|+||++
T Consensus 207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G~v~ 281 (453)
T 2cy8_A 207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDL---TCLAKASA-GGLPGGILG 281 (453)
T ss_dssp ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSE---EEEEGGGG-TTSSCEEEE
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcE---EEEChhhh-CCcceEEEe
Confidence 6655688998775 5556666665 9999999999987 33221 1122222332 38999998 599999999
Q ss_pred cCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCce
Q 014594 297 FPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSN 363 (422)
Q Consensus 297 ~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~ 363 (422)
+++++++.+.. ...+++.|++++.++.++|+. . .+ ..++++++++++.+.|+++ +.....++.|+
T Consensus 282 ~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 359 (453)
T 2cy8_A 282 GREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL--EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFS 359 (453)
T ss_dssp ECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred chHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeee
Confidence 99998887654 123477899999998888865 3 23 6667777777777777653 54333466788
Q ss_pred EEEEEeCC-----C--------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594 364 FILCEVTS-----G--------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM 419 (422)
Q Consensus 364 f~~~~~~~-----~--------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~ 419 (422)
|+|+++++ . .+..++.+.|+++||.+.++ +.+|+++.. .++++++.++|+
T Consensus 360 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~~l~~~~t~~~i~~~l~~l~ 429 (453)
T 2cy8_A 360 GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------GSVFLSAQHEREHVEHLVTTFD 429 (453)
T ss_dssp EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------TEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------CCEEeeccCCHHHHHHHHHHHH
Confidence 99999974 1 12567889999999999543 247777543 344444444443
No 191
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=3.6e-27 Score=230.78 Aligned_cols=279 Identities=15% Similarity=0.144 Sum_probs=202.8
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (422)
+|+++...++|++++++++.+ +.+++++++++++.+++ ++++||+|+++.|.|+.... .++..|++++.++.+
T Consensus 51 ~~~~~~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 127 (393)
T 1n8p_A 51 RSQNPNRENLERAVAALENAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL 127 (393)
T ss_dssp TTCCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred cCCChhHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence 456667889999999999975 45555666999999999 99999999999999984333 345579999999853
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-----CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (422)
| ++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+... ... ..+.+
T Consensus 128 -----d-~~l~~~i~-~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~----~~~~d 195 (393)
T 1n8p_A 128 -----L-NDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGAD 195 (393)
T ss_dssp -----H-HHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCS
T ss_pred -----h-HHHHHhcc-cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH----HcCCe
Confidence 7 89999997 689999999999999999999999999974 8999999999976542 211 22467
Q ss_pred EEEccChhhhccccccc-eeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc
Q 014594 276 IVLRTFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK 350 (422)
Q Consensus 276 i~~~S~SK~~~~~G~r~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~ 350 (422)
+++.|+||.+|.+|+|+ ||+++ ++++++.+...... .+.++..+.++...++. +. ..++..++++.+.+.|+
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~ 272 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLA 272 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99998 48888888765442 34566666666666643 33 66667778888888888
Q ss_pred cCCC-Cc-c-cC----------------C-C-ceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCC----------CC---
Q 014594 351 DVPF-LN-P-YP----------------S-Y-SNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYN----------NK--- 395 (422)
Q Consensus 351 ~~~~-~~-~-~p----------------~-~-~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~----------~~--- 395 (422)
+.+. +. + +| . . ++++++.+++. .+.+.+.+.|...++.+..|+ ..
T Consensus 273 ~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~ 352 (393)
T 1n8p_A 273 ADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGG 352 (393)
T ss_dssp SCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCS
T ss_pred hCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccc
Confidence 7654 21 1 22 1 3 67889999732 234445555443344443221 00
Q ss_pred ---------C-CCCeEEEEecCh---hhHHHHHHHHhhh
Q 014594 396 ---------E-LKGYVRVSVGKP---EHTDALMECLMHL 421 (422)
Q Consensus 396 ---------~-~~~~iRis~~~~---~~~~~l~~al~~l 421 (422)
+ .++.||||++.. ++++.+.++++.+
T Consensus 353 ~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 353 IPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp SCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1 147999999854 3445666666543
No 192
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=1.1e-26 Score=234.29 Aligned_cols=312 Identities=15% Similarity=0.068 Sum_probs=225.1
Q ss_pred CCCCHHHHHHHhcC-CCCC-CC-CCcchH----HHHHHHHHHcCCC--CCCEE---EeCCHHHHHHHHHHHhcCC-----
Q 014594 107 YGPPPEVREALGQL-KFPY-IY-PDPESR----RLRAALAKDSGLE--SDHIL---VGCGADELIDLIMRCVLDP----- 169 (422)
Q Consensus 107 ~~~~~~v~~al~~~-~~~~-~y-~~~~~~----~lr~~la~~~~~~--~~~i~---~~~G~~~al~~~~~~l~~~----- 169 (422)
..++|.+.+++.+. .... .| ..++.. ++++.+++++|++ +++++ +|+|+++++.+++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 34578888888763 2211 12 223322 5677788889987 55554 5899999999998877655
Q ss_pred ---CC-----EEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594 170 ---GD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (422)
Q Consensus 170 ---gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l 240 (422)
|+ .|+++.++|..+...++..|++++.++.+++ +.+|++++++++. +++++|++++|+||||.+.+.++|
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I 224 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD-ENTICVAAILGSTLNGEFEDVKLL 224 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC-TTEEEEEEEBSCTTTCCBCCHHHH
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh-hCCEEEEEecCCCCCCcccCHHHH
Confidence 76 8999999999999999999999999997654 8899999999997 689999999999999999999999
Q ss_pred HHHHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhc
Q 014594 241 LKILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK 309 (422)
Q Consensus 241 ~~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~ 309 (422)
.++++. |+++++|++|..+.. .+.....+...+.+.+..|.+|. ++++.++|+++.. ++.+.......
T Consensus 225 ~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~~~~~~~ 303 (502)
T 3hbx_A 225 NDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFH 303 (502)
T ss_dssp HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred HHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccc-cCCCCCeEEEEEeCHHHhhHHhccC
Confidence 999973 899999999986541 11111111123445677788995 4577789988774 44442221111
Q ss_pred CC------------CCC---cHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeCCC
Q 014594 310 QP------------YNV---SVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTSG 372 (422)
Q Consensus 310 ~~------------~~~---~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~~ 372 (422)
.. ++. ..+.+.++...+....+.++.++..++++++.+.|++++.+.+.+ ...+++.++++++
T Consensus 304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (502)
T 3hbx_A 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDS 383 (502)
T ss_dssp ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSC
T ss_pred cccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCC
Confidence 11 111 334455555555554554478888899999999999998665443 4778899998742
Q ss_pred --CCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594 373 --MDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 373 --~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
.+..++.+.|.++||.+..+..+ ....++||+++ +.++++.|.++|++
T Consensus 384 ~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~ 439 (502)
T 3hbx_A 384 SCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK 439 (502)
T ss_dssp SSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 56779999999999998654332 23468999998 67777777777764
No 193
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=1.1e-25 Score=225.19 Aligned_cols=316 Identities=15% Similarity=0.173 Sum_probs=210.1
Q ss_pred CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC---
Q 014594 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--- 168 (422)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~--- 168 (422)
..++|+..+... +.+.+++.+ +.. ...| +.++..+||++++++++. ++|++|+|+++++.++++++++
T Consensus 43 ~~ylD~~~~~~~----~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~ 116 (467)
T 1ax4_A 43 AVYIDLLTDSGT----NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQ 116 (467)
T ss_dssp GCSEECSCSSSC----CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceeeecccCcCC----HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhc
Confidence 346777554332 344444433 122 1346 456788999999999985 6999999999999999999988
Q ss_pred -CCCE---EEEcCCCchhHHHHHHHcCCEEEEecCC----------CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCcc
Q 014594 169 -PGDK---IVDCPPTFTMYEFDAAVNGAAVVKVPRK----------SDFSLNVELIADAVER---EKPKCIFLTSPNNPD 231 (422)
Q Consensus 169 -~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----------~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt 231 (422)
+||+ |+++.+.|..+.......|++++.++.. .++.+|+++|++++++ .++++|++++|+|||
T Consensus 117 ~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~ 196 (467)
T 1ax4_A 117 KEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSA 196 (467)
T ss_dssp HTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred cCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCC
Confidence 9998 8888777777777788899998877532 1346899999999974 368999999999999
Q ss_pred -CcCCCHHHHHHHHcC----CCeEEEccCCcc----c------cCCCchhhhhh----cCCcEEEEccChhhhccc-ccc
Q 014594 232 -GSIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWVK----KHDNLIVLRTFSKRAGLA-GLR 291 (422)
Q Consensus 232 -G~~~~~e~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~-G~r 291 (422)
|.+++.+++++|++. |+++|+||++.. | .+.+.....+. .... +++.|+||.+|++ |
T Consensus 197 gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G-- 273 (467)
T 1ax4_A 197 GGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG-- 273 (467)
T ss_dssp TSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC--
T ss_pred CccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc--
Confidence 899998877776654 999999998653 0 11111111111 1112 4668999988765 3
Q ss_pred ceeeecC-H-HHHHHHHHhcC------CC-CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 292 VGYGAFP-L-SIIEYLWRAKQ------PY-NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 292 ~G~i~~~-~-~~~~~l~~~~~------~~-~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
|+++++ + ++++.+..... .+ ..+...+.++..+|+.....+..++..++++++.+.|++.+...+.|.++
T Consensus 274 -g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 352 (467)
T 1ax4_A 274 -GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGG 352 (467)
T ss_dssp -EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCS
T ss_pred -eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence 677777 6 88877654321 22 23333333333334321111122233466778888887644323457788
Q ss_pred eEEEEE-------eCC-CCCHHHHHHHH-HhCCcEEEe-CCC-----C--C-----CCCeEEEEec----ChhhHHHHHH
Q 014594 363 NFILCE-------VTS-GMDAKKLKDDL-AKMGVMIRH-YNN-----K--E-----LKGYVRVSVG----KPEHTDALME 416 (422)
Q Consensus 363 ~f~~~~-------~~~-~~~~~~~~~~L-~~~gI~v~~-~~~-----~--~-----~~~~iRis~~----~~~~~~~l~~ 416 (422)
+++|++ ++. +.+..++.+.| .++||.+.+ +.. + + ..+++||+++ +.++++++.+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~ 432 (467)
T 1ax4_A 353 HAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIAD 432 (467)
T ss_dssp SEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHH
T ss_pred eEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHH
Confidence 999999 432 34578899999 799999998 321 0 1 2479999987 2455566665
Q ss_pred HHhh
Q 014594 417 CLMH 420 (422)
Q Consensus 417 al~~ 420 (422)
+|++
T Consensus 433 ~l~~ 436 (467)
T 1ax4_A 433 ALIG 436 (467)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 194
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.95 E-value=7.7e-28 Score=239.69 Aligned_cols=316 Identities=13% Similarity=0.092 Sum_probs=215.3
Q ss_pred CCCCCeEEcCCCC--CCCC-CCHHHH-H-HHhc---C-CCC----CCCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHH
Q 014594 92 RKPEDIVKIDANE--NPYG-PPPEVR-E-ALGQ---L-KFP----YIYPDPESRRLRAALAKDSG-LESDHILVGCGADE 157 (422)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~-~-al~~---~-~~~----~~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~ 157 (422)
.++..++|+..+. ++++ .+|++. + ++.+ . ... ..|+.....+++++++++++ .++++|++++|+++
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gse 130 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGAL 130 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHH
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHH
Confidence 4566788886664 5565 478998 7 7765 2 111 23555556889999999997 56789999999999
Q ss_pred HHHHHHHHhc---C----------C-CCEEEEcCCCchhHHHHHHH---------cCC-----EEEEecCCC--CC----
Q 014594 158 LIDLIMRCVL---D----------P-GDKIVDCPPTFTMYEFDAAV---------NGA-----AVVKVPRKS--DF---- 203 (422)
Q Consensus 158 al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~---------~g~-----~~~~v~~~~--~~---- 203 (422)
+++.+++.+. . + ||+|++..|+|+.+...+.. .+. .++.+|.++ ..
T Consensus 131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 210 (449)
T 2cjg_A 131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM 210 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence 9999998542 2 2 89999999999865432211 122 456666433 11
Q ss_pred ----CCCHHHHHHHhhc--CCCeEEEEeCCCCccCc-CCCHHHHHHHHc---C-CCeEEEccCCccccCCCc--hhhhhh
Q 014594 204 ----SLNVELIADAVER--EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLES--RMEWVK 270 (422)
Q Consensus 204 ----~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~--~~~~~~ 270 (422)
..|+++|++.+++ +++++|++++++||+|. +++.+++++|++ . |+++|+||+|.+|...+. .....+
T Consensus 211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~ 290 (449)
T 2cjg_A 211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence 1456678888852 56788777666799995 667666666554 3 999999999998765432 122222
Q ss_pred cCCcEEEEccChhhhccccccceeeecCHHHHHHHH-----H--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHH
Q 014594 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----R--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERE 343 (422)
Q Consensus 271 ~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~-----~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~ 343 (422)
...+++ ||||.+ |+||+++++++++.+. . ....++.|++++.++.++|+...-.+..++++++++
T Consensus 291 ~~~di~---t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~ 362 (449)
T 2cjg_A 291 VAPDIV---AFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGK 362 (449)
T ss_dssp CCCSEE---EECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEE---EecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 333433 689977 7999999998887521 1 123477899999999998863211116677788888
Q ss_pred HHHHHHccC----CC-CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594 344 RLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 415 (422)
Q Consensus 344 ~l~~~L~~~----~~-~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 415 (422)
++.+.|+++ +. +...++.|+|+++++++..+..++.+.|.++||.+.+++ .+++||+++ +.++++++.
T Consensus 363 ~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~l 438 (449)
T 2cjg_A 363 YLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG----ADTVRFRPPLTVSTAEIDAAI 438 (449)
T ss_dssp HHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecCC----CCEEEEECCCCCCHHHHHHHH
Confidence 888888753 43 333456788888998643346789999999999999874 589999764 344444444
Q ss_pred HHHh
Q 014594 416 ECLM 419 (422)
Q Consensus 416 ~al~ 419 (422)
++|+
T Consensus 439 ~~l~ 442 (449)
T 2cjg_A 439 AAVR 442 (449)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 195
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=2.6e-26 Score=222.64 Aligned_cols=295 Identities=16% Similarity=0.145 Sum_probs=220.7
Q ss_pred CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594 110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (422)
Q Consensus 110 ~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (422)
++++.+++.+. .....++.++..++|++++++++.+ ++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus 15 ~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~ 92 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV 92 (367)
T ss_dssp HHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred CHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH
Confidence 46777777663 3323346677899999999999964 8999999999999999998 899999999999999999999
Q ss_pred HHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (422)
Q Consensus 188 ~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~ 264 (422)
+..|++++.++.+.+ +.+|+++++++++ +++++|+ |+||||...+.+++.++++. |+++|+|++|..+. +.+.
T Consensus 93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~ 168 (367)
T 3nyt_A 93 ALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK 168 (367)
T ss_dssp HHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE
T ss_pred HHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe
Confidence 999999999997644 8899999999996 6888888 88999999999999999987 99999999998533 2222
Q ss_pred hhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHcc
Q 014594 265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ 327 (422)
Q Consensus 265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~--------------~~~~~~~~~~aa~~~L~ 327 (422)
..... + ++++.|| +|.++.+|. .|++++ ++++.+.+..... .+..+.+...++...++
T Consensus 169 ~~~~~---~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~ 243 (367)
T 3nyt_A 169 RSCNL---S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE 243 (367)
T ss_dssp ETTSS---S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred eccCC---C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence 22211 1 4788887 899986576 888888 5778887776443 24567777777766664
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCC--ce--EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSY--SN--FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K----- 395 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~--~~--f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~----- 395 (422)
. ++ ..++.+++++++.+.|++++..... +.. .. ++.+.++ +.+++.+.|.++||.++.+.. +
T Consensus 244 ~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~GI~~~~~~~~~~~~~~ 317 (367)
T 3nyt_A 244 I---FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---NRESVQASLKAAGVPTAVHYPIPLNKQP 317 (367)
T ss_dssp T---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---SHHHHHHHHHHHTCCCBCSCSSCGGGSG
T ss_pred H---HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---CHHHHHHHHHHCCCceeccCCCccccCh
Confidence 3 33 5566777788888888887532221 222 11 2344543 688999999999999986542 0
Q ss_pred --C------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 396 --E------------LKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 396 --~------------~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
. ....+|+++. +.++++.+.++++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 318 AVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp GGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred hhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 0 0247899876 456677777776653
No 196
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=8.4e-26 Score=224.86 Aligned_cols=316 Identities=13% Similarity=0.073 Sum_probs=217.5
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---h---HHHH-HHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---S---RRLR-AALAKDSGLESDHILVGCGADELIDL 161 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~---~~lr-~~la~~~~~~~~~i~~~~G~~~al~~ 161 (422)
+.|+|..++++. +|++++++.+ +. +..+||.. + . .++. +.+++++|.+. ..++++|+++++..
T Consensus 46 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~-~~v~~~sGs~a~~~ 122 (447)
T 3h7f_A 46 DTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF-ANVQPHSGAQANAA 122 (447)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHH
T ss_pred CceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHH
Confidence 468998888765 7999999976 32 22334321 1 1 2344 88888999764 23337788899999
Q ss_pred HHHHhcCCCCEEEEcCCCchhH-HH--H--HHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 162 IMRCVLDPGDKIVDCPPTFTMY-EF--D--AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~-~~--~--~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++++++++||+|+++.|+|..+ .. . ....+..++.++.+ +++.+|++++++.+.+.++++|++++|+||++.
T Consensus 123 a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~-- 200 (447)
T 3h7f_A 123 VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL-- 200 (447)
T ss_dssp HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--
T ss_pred HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--
Confidence 9999999999999999998652 11 1 11134567777754 457899999999996568899999999999887
Q ss_pred CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594 236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (422)
Q Consensus 236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~- 312 (422)
+.+++.++|+. |+++|+||+|.. +.+.+....... ...+++.|+||.+ +|+|.||+++++++++.+.....++
T Consensus 201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~ 276 (447)
T 3h7f_A 201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HADVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQ 276 (447)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CCcEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcc
Confidence 88999999987 999999999753 222111111111 2237899999976 5889999999999988887765543
Q ss_pred --CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccC-----CCCcc-cCCCceEEEEEeCC-CCCHHHHHH
Q 014594 313 --NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDV-----PFLNP-YPSYSNFILCEVTS-GMDAKKLKD 380 (422)
Q Consensus 313 --~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~-----~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~ 380 (422)
+.+...+.++..++.. .++.+ .++++.++++++.+.|++. ++..+ .+..++++|+++.. +.+.+.+.+
T Consensus 277 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
T 3h7f_A 277 QGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAED 356 (447)
T ss_dssp CSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHH
Confidence 2233334444444332 33455 8889999999999999887 53322 23577889998853 457777888
Q ss_pred HHHhCCcEEE----eCC--CCCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 381 DLAKMGVMIR----HYN--NKELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 381 ~L~~~gI~v~----~~~--~~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
.|.++||.++ ++. .+..++++||++. ++++++++.+++++
T Consensus 357 ~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 357 LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 8888899998 552 2445688999873 34566666666543
No 197
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=7.2e-26 Score=224.71 Aligned_cols=312 Identities=15% Similarity=0.129 Sum_probs=221.4
Q ss_pred CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh------
Q 014594 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV------ 166 (422)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l------ 166 (422)
+.++|+++. +++ .+++.+++.+ +.....|++++..++|++++++++.+ ++++++++++++..+++++
T Consensus 30 ~~~~i~~~~--~~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~ 103 (437)
T 3bb8_A 30 GKSVVPPSG--KVI--GTKELQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLG 103 (437)
T ss_dssp TTSCBCSCC--CCC--CHHHHHHHHHHHHHCCCBSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGG
T ss_pred CCccccCCC--CCC--CHHHHHHHHHHHHcCCcCCChHHHHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhcccc
Confidence 345677753 333 3667777665 33234557778899999999999975 6788888889999999988
Q ss_pred ---cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 167 ---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 167 ---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++||+|+++.|+|+.+...++..|++++.++.+. ++.+|+++++++++ +++++|++++ ++|...+.+++.+
T Consensus 104 ~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~ 179 (437)
T 3bb8_A 104 VRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVS-DKTKAIMIAH---TLGNLFDLAEVRR 179 (437)
T ss_dssp GGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred cccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcC-CCCeEEEEeC---CCCChhcHHHHHH
Confidence 78999999999999999999999999999998654 67899999999997 6899999985 3555689999999
Q ss_pred HHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-HHhc----------
Q 014594 243 ILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-WRAK---------- 309 (422)
Q Consensus 243 i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-~~~~---------- 309 (422)
+++. |+++|+|++|..+. .+... .....+ +++.||+|.++++|.|+|+++++++.+..+ ....
T Consensus 180 l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTYDGKM---AGTFGD-IGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAP 255 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEE---TTSSSS-EEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----
T ss_pred HHHHcCCEEEEECccccCceECCee---cccccC-EEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccc
Confidence 9987 99999999998543 21111 111122 677899888888999999999986654432 2210
Q ss_pred -----------------------------CCC--CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc
Q 014594 310 -----------------------------QPY--NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY 358 (422)
Q Consensus 310 -----------------------------~~~--~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 358 (422)
..+ .++.+...++.+.|++ ..+..++.+++++++.+.|++++.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 333 (437)
T 3bb8_A 256 GCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER--IEEFVEKRKANFKYLKDALQSCADFIEL 333 (437)
T ss_dssp ------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHGGGGTTTEEC
T ss_pred ccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhccCCcccc
Confidence 001 2345666656666543 1224445577788999999887543333
Q ss_pred CC--------CceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC------------------------CCeEEEEe
Q 014594 359 PS--------YSNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL------------------------KGYVRVSV 405 (422)
Q Consensus 359 p~--------~~~f~~-~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~------------------------~~~iRis~ 405 (422)
+. ..+|++ ++.+.+.+.+++.+.|.++||.++.+..+.. .+.+||++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~ 413 (437)
T 3bb8_A 334 PEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGI 413 (437)
T ss_dssp CCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECC
T ss_pred CCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecC
Confidence 31 123443 4443356789999999999999987654110 12489987
Q ss_pred c---ChhhHHHHHHHHhhh
Q 014594 406 G---KPEHTDALMECLMHL 421 (422)
Q Consensus 406 ~---~~~~~~~l~~al~~l 421 (422)
. +.++++++.++++.+
T Consensus 414 ~~~~t~~di~~i~~~l~~~ 432 (437)
T 3bb8_A 414 YPGLTHDHLDYVVSKFEEF 432 (437)
T ss_dssp STTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 5 456677777777653
No 198
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=1.9e-26 Score=223.99 Aligned_cols=294 Identities=14% Similarity=0.156 Sum_probs=214.9
Q ss_pred CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594 110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (422)
Q Consensus 110 ~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (422)
++++.+++.+. .....++.++..++|++++++++.+ ++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus 16 ~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~ 93 (373)
T 3frk_A 16 EYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV 93 (373)
T ss_dssp HHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH
T ss_pred CHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 46677777653 2223346677899999999999964 8999999999999999999 899999999999999999888
Q ss_pred HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594 188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (422)
Q Consensus 188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~ 264 (422)
+..|++++.++.+ +++.+|+++++++++ +++++|+ |+||||...+.+++.++++. |+++|+|++|..+. .+..
T Consensus 94 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 169 (373)
T 3frk_A 94 SYTGAKPIFVEPDIRTYNIDPSLIESAIT-EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM 169 (373)
T ss_dssp HHHSCEEEEECEETTTTEECGGGTGGGCC-TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred HHcCCEEEEEeccccccCcCHHHHHHhcC-CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE
Confidence 9999999999965 567899999999997 5888888 77899999999999999998 99999999998643 2222
Q ss_pred hhhhhhcCCcEEEEccCh--hhhccccccceeeecC-HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHcc
Q 014594 265 RMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ 327 (422)
Q Consensus 265 ~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~--------------~~~~~~~~~~aa~~~L~ 327 (422)
..... ..+++.||+ |.++..| +.|+++++ +++.+.+..... .+.++.+..+++...++
T Consensus 170 ~~~~~----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~ 244 (373)
T 3frk_A 170 KVGSL----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLK 244 (373)
T ss_dssp ETTSS----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHH
T ss_pred ecccc----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHH
Confidence 11111 137788877 8776324 47888875 567776665432 12345555554444443
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C----
Q 014594 328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K---- 395 (422)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~--~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~---- 395 (422)
.++ ..++.+++.+++.+.|++++ +.+. +... .+ +.+.. .+.+++.+.|.++||.++.+.. +
T Consensus 245 ---~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~ 317 (373)
T 3frk_A 245 ---YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---EKRDELQKYLNNNGIGTLIHYPIPIHLQ 317 (373)
T ss_dssp ---THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---SSHHHHHHHHHHTTBCCBCSCSSCGGGS
T ss_pred ---HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---CCHHHHHHHHHHCCCCcccCcCCccccC
Confidence 233 66777888889999998887 4432 1222 22 22333 2788999999999999986551 0
Q ss_pred -----------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 396 -----------EL-------KGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 396 -----------~~-------~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.. .+.+|+++. +.++++++.+++++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 318 QAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp GGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred hHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 00 167999986 566777777777653
No 199
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=1.2e-25 Score=221.70 Aligned_cols=279 Identities=20% Similarity=0.174 Sum_probs=198.6
Q ss_pred CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (422)
Q Consensus 125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (422)
+|+++...+|++++++++|.+ ..++++++++++..++++++++||+|+++.|+|..+.. .++..|++++.++.+
T Consensus 78 r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 78 RSSNPTVEDLEQRLKNLTGAL--GVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp --CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 456777899999999999964 35666677899999999999999999999999987766 566799999999853
Q ss_pred CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|....... .. ..+.++++.
T Consensus 156 -----d~~~l~~ai~-~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~-~~----~~g~div~~ 224 (430)
T 3ri6_A 156 -----DSLAVEHACD-ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE-AK----RLGVDIEVL 224 (430)
T ss_dssp -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC-GG----GGTCSEEEE
T ss_pred -----CHHHHHHhhC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-hH----HcCCEEEEE
Confidence 8999999997 689999999999999999999999999997 99999999998544311 11 234458999
Q ss_pred cChhhhccccccceeeec---CHHH------------------HHHHHHh---cCCCCCcHHHHHHHHHHccCChHHH-H
Q 014594 280 TFSKRAGLAGLRVGYGAF---PLSI------------------IEYLWRA---KQPYNVSVAAEVAACAALQNPIYLE-V 334 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~---~~~~------------------~~~l~~~---~~~~~~~~~~~~aa~~~L~~~~~~~-~ 334 (422)
|+||.++.+|..+|.+++ +.++ ++++... .....+++.....+...+ +.+. +
T Consensus 225 S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l---~~l~~r 301 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL---ETMALR 301 (430)
T ss_dssp ECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH---HHHHHH
T ss_pred CCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hhHHHH
Confidence 999999866654444443 2111 2222211 112334555444333333 4445 6
Q ss_pred HHHHHHHHHHHHHHHccCCCCc-c-cCC---------------Cce-EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-
Q 014594 335 KEALIKERERLFKLLKDVPFLN-P-YPS---------------YSN-FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK- 395 (422)
Q Consensus 335 ~~~~~~~~~~l~~~L~~~~~~~-~-~p~---------------~~~-f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~- 395 (422)
.++..++.+.+.+.|++.+.+. + +|. .|. .+|+++++..++.+|.+.|...++.+..|+..
T Consensus 302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~s 381 (430)
T 3ri6_A 302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKS 381 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCc
Confidence 6778899999999999887654 3 343 144 89999973334556666665445545444321
Q ss_pred ----------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014594 396 ----------------------ELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 396 ----------------------~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
..+++||||++.+. .++|.+.|++
T Consensus 382 li~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~-~~dl~~dl~~ 427 (430)
T 3ri6_A 382 LILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE-IEDLKEDILQ 427 (430)
T ss_dssp EEECTGGGC---------CGGGSCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHHH
Confidence 13679999999765 4667666654
No 200
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=1.6e-25 Score=217.87 Aligned_cols=309 Identities=17% Similarity=0.116 Sum_probs=224.1
Q ss_pred cCCCCCCCCCCHHHHHHHhc-CCCCCCCC-CcchHHHHHHH-HHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Q 014594 100 IDANENPYGPPPEVREALGQ-LKFPYIYP-DPESRRLRAAL-AKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVD 175 (422)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~-~~~~~~y~-~~~~~~lr~~l-a~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~ 175 (422)
+..+++++++++++.+++.+ +..+..++ .+...+|++++ ++++| ..+++++++|+++++.+++.++ +++||+|++
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~ 83 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALM 83 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEE
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEE
Confidence 33457889888888888876 33333333 55678999999 99999 3568999999999999999988 899999999
Q ss_pred cCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCC--CeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEE
Q 014594 176 CPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVL 252 (422)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~ 252 (422)
+.|+|..+...++..|++++.++.+ +++.+|++++++++.+++ +|+|+ |+||+|...+.+++.++++.|+++|+
T Consensus 84 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~~~~~vi~ 160 (377)
T 3ju7_A 84 PSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEKKGVPVVV 160 (377)
T ss_dssp ESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHHTTCCBEE
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHhcCCEEEE
Confidence 9999999999999999999999975 578999999999983345 89888 78899999999999999988899999
Q ss_pred ccCCccccC-CCchhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcC--------------CCCC
Q 014594 253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNV 314 (422)
Q Consensus 253 Deay~~~~~-~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~--------------~~~~ 314 (422)
|++|..... .+.... .... .+.+.|| +|.++. | +.|++++ ++++.+++..... .+.+
T Consensus 161 D~a~a~g~~~~~~~~g--~~~~-d~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~ 235 (377)
T 3ju7_A 161 DAAPGFGLMNGGMHYG--QDFS-GMIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM 235 (377)
T ss_dssp ECTTCTTCEETTEETT--TTCS-SEEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred ECCCccCCeECCEecc--CCCC-cEEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence 999985431 111110 0111 2445554 698874 5 6777776 5778887776543 2345
Q ss_pred cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCc-----eEEEEEeCCCCCHHHHHHHHHhCC
Q 014594 315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYS-----NFILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~-----~f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
+.+.++.+...++ .++ ..++.+++++++.+.|++++.+. ..+..+ .|+.+.+++..+.+++.+.|.++|
T Consensus 236 ~~~~aa~~~~~l~---~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (377)
T 3ju7_A 236 SEYAAAIGIATMK---KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQK 312 (377)
T ss_dssp CHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCC
Confidence 6666665555553 334 66677778888888888876431 222222 245566665556899999999999
Q ss_pred cEEEeCCCC--------C------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594 387 VMIRHYNNK--------E------L-------KGYVRVSVG---KPEHTDALMECLMH 420 (422)
Q Consensus 387 I~v~~~~~~--------~------~-------~~~iRis~~---~~~~~~~l~~al~~ 420 (422)
|.++.+... . . .+.+|+.+. +.++++++.+++++
T Consensus 313 I~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 313 IEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp BCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred CceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 999865420 0 0 246899876 35566666666654
No 201
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=1.3e-25 Score=220.70 Aligned_cols=279 Identities=10% Similarity=0.061 Sum_probs=199.9
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCC
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKS 201 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~ 201 (422)
|+++...++|+++|+++|.+ ++++++|++++++.++.+++++||+|+++.|.|......+ +..|+++..++.+
T Consensus 79 ~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~- 155 (415)
T 2fq6_A 79 RGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL- 155 (415)
T ss_dssp TCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred CCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-
Confidence 45566789999999999963 5777789999999999999999999999999998665443 3479999999742
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~ 278 (422)
|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+|++|..+.... .. ..+.++++
T Consensus 156 ----d~~~le~ai~-~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~-p~----~~g~Div~ 225 (415)
T 2fq6_A 156 ----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFK-AL----DFGIDVSI 225 (415)
T ss_dssp ----CGGGGGGGCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSC-GG----GGTCSEEE
T ss_pred ----CHHHHHHhhc-cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCC-cc----ccCCeEEE
Confidence 7899999997 689999999999999999999999999975 89999999998653221 11 23456899
Q ss_pred ccChhhhcccccc-ceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594 279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF 354 (422)
Q Consensus 279 ~S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~ 354 (422)
.|++|.++.+|.+ +||+++++++++.+...... ...++....++...+ +++. ..++..++.+.+.+.|++.+.
T Consensus 226 ~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l---~~l~~r~~~~~~n~~~l~~~L~~~~~ 302 (415)
T 2fq6_A 226 QAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL---RTLGVRLRQHHESSLKVAEWLAEHPQ 302 (415)
T ss_dssp EETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999988755 69999988888877654432 334555444444444 3444 666778888888898887653
Q ss_pred Cc-c-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-------------------
Q 014594 355 LN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN------------------- 394 (422)
Q Consensus 355 ~~-~-~p----------------~~~~f~~~~~~~~---~~~~~~~~~L~~~gI~v~~~~~------------------- 394 (422)
+. + +| ..+..+++.++++ .+.+.+.+.|...++.++.|+.
T Consensus 303 v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~ 382 (415)
T 2fq6_A 303 VARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQG 382 (415)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTC
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchh
Confidence 32 1 22 2467888999743 1333444443333344433311
Q ss_pred -CC-CCCeEEEEecChh---hHHHHHHHHhh
Q 014594 395 -KE-LKGYVRVSVGKPE---HTDALMECLMH 420 (422)
Q Consensus 395 -~~-~~~~iRis~~~~~---~~~~l~~al~~ 420 (422)
.+ .++.||||++... .+++|.++|+.
T Consensus 383 ~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 383 EIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 11 2479999998643 34555666554
No 202
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.94 E-value=1.1e-25 Score=221.08 Aligned_cols=267 Identities=15% Similarity=0.098 Sum_probs=201.2
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE--eCCHHHHHHHHHHHhcCCCCEEEEcC-C
Q 014594 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P 178 (422)
Q Consensus 111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~--~~G~~~al~~~~~~l~~~gd~Vl~~~-p 178 (422)
++|++++.+. ..++.|++.+..+|++.+++++|.+.. ++. ++|+++++..++.+++++||+|+++. |
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~ 124 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGE 124 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSS
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5677777542 123567888889999999999997533 443 78889999999999999999999999 9
Q ss_pred CchhHHHH-----------HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeC----CCCccCcCCCHHHHHH
Q 014594 179 TFTMYEFD-----------AAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLLK 242 (422)
Q Consensus 179 ~y~~~~~~-----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~e~l~~ 242 (422)
.|..+... ++..|++++.++.++++.+|++++++++++ +++|+|++++ |+||||.+.+.+++.+
T Consensus 125 ~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~ 204 (427)
T 3i16_A 125 PYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVD 204 (427)
T ss_dssp CCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHH
T ss_pred ccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHH
Confidence 99876633 345799999999877778999999999974 6899999998 9999999999999999
Q ss_pred HHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CC--C
Q 014594 243 ILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--V 314 (422)
Q Consensus 243 i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~--~ 314 (422)
+++. |+++++|++|..+....... ..+.+++++|+||.+|.+| .+.||+++++++++++...... .+ .
T Consensus 205 la~~~~~g~~livD~a~~~~~~~~~p~----~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~ 280 (427)
T 3i16_A 205 CVKNIRKDIICFVDNCYGEFMDTKEPT----DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGEC 280 (427)
T ss_dssp HHHHHCTTSEEEEECTTTTTSSSSCGG----GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGC
T ss_pred HHHHhCCCCEEEEECCCccccccCCcc----ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccC
Confidence 9975 99999999999876332222 1234589999999998655 6789999999999999874332 21 1
Q ss_pred cH-HHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594 315 SV-AAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM 385 (422)
Q Consensus 315 ~~-~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~ 385 (422)
++ +. ++..+++.-..+. ++++..+++.++.+.|+++|+ .++|+.+. .+.+.+.+.....+|++.|...
T Consensus 281 ~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 281 GSTFG--VVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTG 355 (427)
T ss_dssp CCCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHT
T ss_pred CccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhc
Confidence 11 11 1122222223334 778889999999999999986 55666554 7778885333456778888765
No 203
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=7.5e-25 Score=218.52 Aligned_cols=283 Identities=13% Similarity=0.059 Sum_probs=204.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHH-HHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCC
Q 014594 132 RRLRAALAKDSGLESDHILVGCGAD-ELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSL 205 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i~~~~G~~-~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~ 205 (422)
.++++++++++|++++ +++|+|++ .++..++.++.. +|+.|+++.+.|..+...++..|++++.++. ++++.+
T Consensus 136 ~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~ 214 (456)
T 2z67_A 136 NKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYV 214 (456)
T ss_dssp HHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred HHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCc
Confidence 4588999999998776 99999999 455545554433 6788999999999999888999999999885 567789
Q ss_pred CHHHHHHHh-hc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC--chhhhhhcCCcEEEE
Q 014594 206 NVELIADAV-ER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVL 278 (422)
Q Consensus 206 d~~~l~~~i-~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~ 278 (422)
|+++|++++ +. .++.+|++++||||||.+.+.++|.++++. |+++++|++|..+..+. ........ +..+++
T Consensus 215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~ 293 (456)
T 2z67_A 215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVV 293 (456)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEE
T ss_pred CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEE
Confidence 999999999 42 477888889999999999999999999998 99999999998765311 11111111 334678
Q ss_pred ccChhhhccccccceeeec-CHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC-
Q 014594 279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP- 353 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~- 353 (422)
.|++|.++ ++.++||+++ ++++++.+......+. .+.+.+.++...+.. ++++ +.++..++++++.+.|++++
T Consensus 294 ~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~ 371 (456)
T 2z67_A 294 SSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGS-KNYLELVKNQKNSKKLLDELLNDLSK 371 (456)
T ss_dssp EEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 89999554 6789999999 6788887743322221 224445555555543 3445 88899999999999998872
Q ss_pred --CCcccCCCceEEEEEe--CCCCCHHHHHHHHHhCCc---EEE------eCCC--CCCCCeEEEEec---ChhhHHHHH
Q 014594 354 --FLNPYPSYSNFILCEV--TSGMDAKKLKDDLAKMGV---MIR------HYNN--KELKGYVRVSVG---KPEHTDALM 415 (422)
Q Consensus 354 --~~~~~p~~~~f~~~~~--~~~~~~~~~~~~L~~~gI---~v~------~~~~--~~~~~~iRis~~---~~~~~~~l~ 415 (422)
+..+.++. +++++.+ ++ ...++.+.|.++|| .+. .|.. ....+++|++++ +.++++++.
T Consensus 372 ~~g~~v~~~~-~~v~~~~~~~~--~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l 448 (456)
T 2z67_A 372 KTGGKFLDVE-SPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSV 448 (456)
T ss_dssp HSSCCBCCCC-CSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHH
T ss_pred ccCCEecCCC-CeEEEEEeccc--HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHH
Confidence 24444444 7777777 42 25788999998875 443 1111 112479999976 466677777
Q ss_pred HHHhhh
Q 014594 416 ECLMHL 421 (422)
Q Consensus 416 ~al~~l 421 (422)
++|+++
T Consensus 449 ~~L~~~ 454 (456)
T 2z67_A 449 SKLEKI 454 (456)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 777653
No 204
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.93 E-value=1.4e-24 Score=212.64 Aligned_cols=278 Identities=15% Similarity=0.107 Sum_probs=199.5
Q ss_pred CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-----HHHcCCEEEEec
Q 014594 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVP 198 (422)
Q Consensus 124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~ 198 (422)
.+|+++...+|+++++++++.+ ++++++++++|+..+ ..++++||+|+++.|+|...... .+..|++++.++
T Consensus 62 ~r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 62 SRTHNPTRFAYERCVAALEGGT--RAFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 3456677889999999999864 677777779999984 55889999999999999844433 334699999998
Q ss_pred CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (422)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (422)
.+ |+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|....... .. ..+.+++
T Consensus 139 ~~-----d~~~l~~~i~-~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div 207 (400)
T 3nmy_A 139 LT-----DPAAFKAAIR-ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-PL----SLGADLV 207 (400)
T ss_dssp TT-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-GG----GGTCSEE
T ss_pred CC-----CHHHHHHHhc-cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-hh----hcCCcEE
Confidence 53 8999999997 689999999999999999999999999987 99999999997432211 11 2245689
Q ss_pred EccChhhhcccccccee--ee-cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHcc
Q 014594 278 LRTFSKRAGLAGLRVGY--GA-FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKD 351 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~--i~-~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~ 351 (422)
+.|+||.++.+|.++|. ++ .++++++.+...... ...++....++...++. +. +.++..++.+.+.+.|++
T Consensus 208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~---l~~r~~~~~~~a~~l~~~L~~ 284 (400)
T 3nmy_A 208 VHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---LPLRMRAHCENALALAQWLET 284 (400)
T ss_dssp EEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTT
T ss_pred EecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHc
Confidence 99999999878777755 33 477888887655443 45677777666666643 44 667778889999999988
Q ss_pred CCCCc-c-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014594 352 VPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------------ 394 (422)
Q Consensus 352 ~~~~~-~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------------------ 394 (422)
.+.+. + +| ..|.+++++++.+ .....|.+.|.-.++.+..|+.
T Consensus 285 ~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 364 (400)
T 3nmy_A 285 HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVA 364 (400)
T ss_dssp CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHH
T ss_pred CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHH
Confidence 76543 2 22 2467899999632 1234445554433333332221
Q ss_pred -----CCCCCeEEEEecChhhHHHHHHHHh
Q 014594 395 -----KELKGYVRVSVGKPEHTDALMECLM 419 (422)
Q Consensus 395 -----~~~~~~iRis~~~~~~~~~l~~al~ 419 (422)
.-.++.+|+|++.+.. ++|.+.|+
T Consensus 365 ~~~~~gi~~~liRlsvGle~~-~dli~dl~ 393 (400)
T 3nmy_A 365 RREQLGISDALVRLSVGIEDL-GDLRGDLE 393 (400)
T ss_dssp HHHHHTCCTTEEEEECCSSCH-HHHHHHHH
T ss_pred HHHhcCCCcCeEEEEeCcCCH-HHHHHHHH
Confidence 0125799999997543 44444443
No 205
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=3e-25 Score=217.24 Aligned_cols=265 Identities=15% Similarity=0.150 Sum_probs=200.3
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP- 177 (422)
Q Consensus 111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~---~~G~~~al~~~~~~l~~~gd~Vl~~~- 177 (422)
.+|++++.+. ..++.|++.+..+|++.+++++|.+ ..++ ++|+++++..++.+++++||+|+++.
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e--~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~ 109 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTE--AALVRPQIISGTHAISTVLFGILRPDDELLYITG 109 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCS--EEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSS
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCC--cEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 4566666542 1235678888899999999999964 3444 88999999999999999999999998
Q ss_pred CCchhHHHH----------HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC----CCCccCcCCCHHHHHHH
Q 014594 178 PTFTMYEFD----------AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS----PNNPDGSIINDEDLLKI 243 (422)
Q Consensus 178 p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~----p~NPtG~~~~~e~l~~i 243 (422)
|.|..+... ++..|++++.++.++++.+|+++++++++ +++|+|++++ |+||||.+.+.+++.++
T Consensus 110 ~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~-~~tklV~i~~s~g~p~nptg~v~~l~~I~~l 188 (409)
T 3jzl_A 110 QPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT-PKTKMIGIQRSRGYADRPSFTIEKIKEMIVF 188 (409)
T ss_dssp SCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHH
T ss_pred CCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc-CCCeEEEEECCCCCCCCCcCccccHHHHHHH
Confidence 999877643 35579999999987778899999999997 6899999999 99999999999999999
Q ss_pred HcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--C----C
Q 014594 244 LEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--Y----N 313 (422)
Q Consensus 244 ~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~----~ 313 (422)
++. |+++++|++|..+....... ..+.+++++|+||.+|.+| .+.||+++++++++++...... + +
T Consensus 189 a~~~~~~~~livD~a~~~~~~~~~p~----~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g 264 (409)
T 3jzl_A 189 VKNINPEVIVFVDNCYGEFVEYQEPP----EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAG 264 (409)
T ss_dssp HHHHCTTCEEEEECTTCTTTSSCCSG----GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCC
T ss_pred HHhhCCCCEEEEeCCcccccccCCcc----ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccccccccc
Confidence 975 89999999999876322222 1234589999999998655 4469999999999999874322 1 1
Q ss_pred CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhCC
Q 014594 314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG 386 (422)
Q Consensus 314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~g 386 (422)
.......++...+ .... ++++..+++.++.+.|+++|+ .++|..+. .+.+.+.+.....++++.|.+..
T Consensus 265 ~~~~~~~~~l~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 265 ASLYSLLEMYQGF---FLAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS 339 (409)
T ss_dssp CCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 1111122333333 2234 777888999999999999986 44555443 66778764445567888888654
No 206
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1.8e-25 Score=222.27 Aligned_cols=275 Identities=12% Similarity=-0.006 Sum_probs=191.3
Q ss_pred CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCC-
Q 014594 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSD- 202 (422)
Q Consensus 126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~- 202 (422)
++.....++++++++ +|.+ +++++++|+++++..++++++++||+|+++.|+|..+...+...|++++.++. +++
T Consensus 54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~ 131 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT 131 (446)
T ss_dssp SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTT
T ss_pred CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeecccc
Confidence 355567899999999 9976 78999999999999999999999999999999999999888889999999986 544
Q ss_pred ---CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEE
Q 014594 203 ---FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV 277 (422)
Q Consensus 203 ---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~ 277 (422)
+.+|++++ +. ++++++++++ .|+||.+++.+++.++|+. |+++|+||+|.. +.+.+...... ..+..++
T Consensus 132 ~~~~~~d~~~l---~~-~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~-~~g~Di~ 205 (446)
T 2x3l_A 132 NHYNKVNLSRL---NN-DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL-NYQADYV 205 (446)
T ss_dssp SSEEEEEC-----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG-GGTCSEE
T ss_pred CcCCCCCHHHH---cC-CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH-HcCCCEE
Confidence 45788877 33 6799999999 5559999999999999987 999999999986 22222111111 1123489
Q ss_pred EccChhhhccccccceeeecCHHHHH--HHHH---hcCCCCCcHHHHHHHHHHc---cCChHHHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAGLRVGYGAFPLSIIE--YLWR---AKQPYNVSVAAEVAACAAL---QNPIYLEVKEALIKERERLFKLL 349 (422)
Q Consensus 278 ~~S~SK~~~~~G~r~G~i~~~~~~~~--~l~~---~~~~~~~~~~~~~aa~~~L---~~~~~~~~~~~~~~~~~~l~~~L 349 (422)
+.|+||.++ ++.++||+++++++++ .+.. .....+.+.....++.+++ +.....+..++.+++++++++.
T Consensus 206 ~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~- 283 (446)
T 2x3l_A 206 VQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK- 283 (446)
T ss_dssp EECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred EECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence 999999643 3345899999776543 3322 1233445554443333333 2211111344445555555554
Q ss_pred ccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE-eCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 350 KDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR-HYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 350 ~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~-~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+ +.+ .+..+.++|+.++ +.+..++.+.|.++||.++ ++ .+++|++++ +.+++ ++.++|+++
T Consensus 284 ---g-~~~~~~~~~~~l~i~~~-~~~~~~l~~~L~~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~ 349 (446)
T 2x3l_A 284 ---G-FEMLQVDDPLKLLIKYE-GFTGHDIQNWFMNAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKI 349 (446)
T ss_dssp ---T-CEEEECSSTTEEEEECT-TSCHHHHHHHHHHTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred ---C-CEECcCCCCeEEEEEeC-CcCHHHHHHHHHHCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence 3 333 2344568999987 6788999999998899997 43 378999987 45556 666666543
No 207
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=6.3e-25 Score=215.74 Aligned_cols=264 Identities=14% Similarity=0.115 Sum_probs=198.8
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP- 177 (422)
Q Consensus 111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~---~~G~~~al~~~~~~l~~~gd~Vl~~~- 177 (422)
+.|++++.+. ..++.|++.+..+|++.+++++|.+ ..++ ++|+++++..++.++++|||+|++++
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e--~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~ 124 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTE--SAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICG 124 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCS--EEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCC--ceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 6777777652 1235677778889999999999964 3455 78889999999999999999999998
Q ss_pred CCchhHHH-----------HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeC----CCCccCcCCCHHHHH
Q 014594 178 PTFTMYEF-----------DAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLL 241 (422)
Q Consensus 178 p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~e~l~ 241 (422)
|.|..+.. .++..|++++.++. +++.+|++++++++++ +++|+|++++ |+||||.+.+.+++.
T Consensus 125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~ 203 (427)
T 3hvy_A 125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEII 203 (427)
T ss_dssp SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHH
T ss_pred CCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHH
Confidence 99987653 33457999999998 6778999999999975 6899999999 999999999999999
Q ss_pred HHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CC--
Q 014594 242 KILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN-- 313 (422)
Q Consensus 242 ~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~-- 313 (422)
++++. |+++++|++|..+........ .+.+++++|+||.+|.+| .+.||+++++++++++...... .+
T Consensus 204 ~ia~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~ 279 (427)
T 3hvy_A 204 KSIREVNENVIVFVDNCYGEFVEEKEPTD----VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGE 279 (427)
T ss_dssp HHHHHHCSSSEEEEECTTCTTTSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGG
T ss_pred HHHHHhCCCCEEEEECCccccccCCCCcc----cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccc
Confidence 99986 999999999998763332221 234589999999987544 5679999999999999875322 11
Q ss_pred CcH-HH-HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594 314 VSV-AA-EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM 385 (422)
Q Consensus 314 ~~~-~~-~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~ 385 (422)
..+ +. ...+...+ .... ++++..++..++.+.|+++|+ .+.|..+. .+.+.+.+.....+|++.|...
T Consensus 280 ~~~~~~~a~~~~~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 280 CGSTFGVMRSLYEGL---FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA 355 (427)
T ss_dssp CCCCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence 111 11 22222222 2233 777888999999999999986 44555444 6778875333455677777754
No 208
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.93 E-value=9.3e-25 Score=218.44 Aligned_cols=315 Identities=13% Similarity=0.115 Sum_probs=199.8
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC---
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP--- 169 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~--- 169 (422)
.++|+..+... +++.+++.+ +..+ ..| +.++..+||++++++++. +++++|+|+++++..++++++++
T Consensus 42 ~ylD~~~~~~~----~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~ 115 (467)
T 2oqx_A 42 VFIDLLTDSGT----GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_dssp CSEECSCCSSC----SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred eeEecccCCCc----HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccc
Confidence 45677544333 555666654 3322 356 445788999999999985 68999999999999999998888
Q ss_pred --C----CEEEEcCCCchhHHHHHHHcCCEEEEec------CC----CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCc
Q 014594 170 --G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP------RK----SDFSLNVELIADAVER---EKPKCIFLTSPNNP 230 (422)
Q Consensus 170 --g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~------~~----~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NP 230 (422)
| |+|++..+.|..+.......|+.++... .+ .++.+|+++|++++++ +++++|++++|+||
T Consensus 116 ~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~ 195 (467)
T 2oqx_A 116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS 195 (467)
T ss_dssp HHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred cCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence 8 9888875444555556666788776542 11 2346899999999974 37999999999999
Q ss_pred c-CcCCCHHHHHHHHc---C-CCeEEEccCCcc----------ccCCCchhhhhh----cCCcEEEEccChhhhccc-cc
Q 014594 231 D-GSIINDEDLLKILE---M-PILVVLDEAYTE----------FSGLESRMEWVK----KHDNLIVLRTFSKRAGLA-GL 290 (422)
Q Consensus 231 t-G~~~~~e~l~~i~~---~-~~~li~Deay~~----------~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~-G~ 290 (422)
+ |.+++.+.+++|++ . |+++|+|+++.. ..+.+.....+. .... +++.|+||.+|++ |
T Consensus 196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G- 273 (467)
T 2oqx_A 196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD-MLAMSAKKDAMVPMG- 273 (467)
T ss_dssp GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS-EEEEESSSTTCCSSC-
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC-eEEEecccccCCCCc-
Confidence 8 99999877666655 3 999999966543 111121111111 1122 4578999998866 4
Q ss_pred cceeeecCHH----HHHHHHHhc---C---CC-CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccC
Q 014594 291 RVGYGAFPLS----IIEYLWRAK---Q---PY-NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYP 359 (422)
Q Consensus 291 r~G~i~~~~~----~~~~l~~~~---~---~~-~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 359 (422)
||++++++ .+..+.... . .+ ..+.....++...+++....+..++..++++++.+.|++++.... |
T Consensus 274 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~ 350 (467)
T 2oqx_A 274 --GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-Q 350 (467)
T ss_dssp --EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-E
T ss_pred --eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-c
Confidence 78888765 334443321 1 12 223333333323222110011334456778888899987753334 6
Q ss_pred CCceEEEEEeCC---CCC-----HHHHHHHH-HhCCcEEEeCCC------C-------CCCCeEEEEecCh-hhHHHHHH
Q 014594 360 SYSNFILCEVTS---GMD-----AKKLKDDL-AKMGVMIRHYNN------K-------ELKGYVRVSVGKP-EHTDALME 416 (422)
Q Consensus 360 ~~~~f~~~~~~~---~~~-----~~~~~~~L-~~~gI~v~~~~~------~-------~~~~~iRis~~~~-~~~~~l~~ 416 (422)
.+++++|++++. +.+ ...+.+.| .++||.+.+++. + ...+++||+++.. .+.+++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~ 430 (467)
T 2oqx_A 351 AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDF 430 (467)
T ss_dssp ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHH
T ss_pred CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHH
Confidence 778899998842 333 45568888 799999987442 0 1247999999743 22344555
Q ss_pred HHhhh
Q 014594 417 CLMHL 421 (422)
Q Consensus 417 al~~l 421 (422)
++++|
T Consensus 431 ~~~~l 435 (467)
T 2oqx_A 431 IIEAF 435 (467)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 209
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=1.2e-24 Score=215.98 Aligned_cols=310 Identities=17% Similarity=0.158 Sum_probs=205.4
Q ss_pred EEcCCCCCCCCCCHHHHHHHhc--C-CCCCCCC---Ccc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH-h
Q 014594 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIYP---DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-V 166 (422)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~y~---~~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~-l 166 (422)
..++.+..+...|+.+.+.+.+ . .....|. ..+ ..++++++++++|.+++++++++|++.+.+.+..+ .
T Consensus 67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~ 146 (438)
T 1wyu_A 67 AFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR 146 (438)
T ss_dssp CCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred cccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh
Confidence 4566666666667776555532 1 1112231 122 45899999999999888899999999444444333 2
Q ss_pred cCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594 167 LDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~ 242 (422)
+++||+|+++.++|+.+...+ +..|++++.++. +++.+|+++ ++ +++++|++++| ||||.+.+.+++.+
T Consensus 147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~ 219 (438)
T 1wyu_A 147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAE 219 (438)
T ss_dssp HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHH
Confidence 578999999999998876544 458999999996 445777766 54 68999999999 99999999999999
Q ss_pred HHcC-CCeEEEccC-CccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHH----------
Q 014594 243 ILEM-PILVVLDEA-YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLW---------- 306 (422)
Q Consensus 243 i~~~-~~~li~Dea-y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~---------- 306 (422)
+++. |+++|+|.. .+ +...... . ..+..+++.| +|.|| +.|.|+||+++++++++.+.
T Consensus 220 la~~~g~~vivd~d~~a-~g~~~~~-~---~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~ 293 (438)
T 1wyu_A 220 AAHGAGALFVAVADPLS-LGVLKPP-G---AYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDV 293 (438)
T ss_dssp HHHHTTCEEEEECCTTG-GGTBCCH-H---HHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBT
T ss_pred HHHHcCCEEEEEechhh-ccCcCCC-c---cCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceecccccc
Confidence 9987 999996632 21 1110111 1 2222355555 55543 56778999999988776541
Q ss_pred ------------------HhcCCCCC---cHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594 307 ------------------RAKQPYNV---SVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS 362 (422)
Q Consensus 307 ------------------~~~~~~~~---~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 362 (422)
+....++. +.+...++..++. ..+.++ +.++++++++++.+.|++++++.+.++..
T Consensus 294 ~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 373 (438)
T 1wyu_A 294 EGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP 373 (438)
T ss_dssp TSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS
T ss_pred CCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC
Confidence 11122332 2333222221122 123355 88889999999999999985566544434
Q ss_pred eEEEEEeCCCCCHHHHHHHHHhCCcEE--EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 363 NFILCEVTSGMDAKKLKDDLAKMGVMI--RHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v--~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
.|.++.+..+.+..++.+.|.++||.+ +++..+. ++++||++. +.++++++.++|+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 374 FFNEFALALPKDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp BCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCHHHHHHHHHHCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 443333322357899999999999999 5554322 689999998 566777777777654
No 210
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.92 E-value=8.6e-23 Score=199.40 Aligned_cols=298 Identities=17% Similarity=0.135 Sum_probs=210.6
Q ss_pred CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-------cCCCCEEEEcCCCc
Q 014594 109 PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-------LDPGDKIVDCPPTF 180 (422)
Q Consensus 109 ~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-------~~~gd~Vl~~~p~y 180 (422)
.++++++++.+ +.....++.++..++|++++++++.+ ++++++++++++..+++++ +++||+|+++.|+|
T Consensus 13 ~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~ 90 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW 90 (390)
T ss_dssp CCHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred CCHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCc
Confidence 35778888766 33223446677899999999999975 6777788889999999998 78999999999999
Q ss_pred hhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc
Q 014594 181 TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE 258 (422)
Q Consensus 181 ~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~ 258 (422)
+.+...++..|++++.++.+++ +.+|++++++.++ +++++|+++| ++|...+.+++.++++. |+++|+|++|..
T Consensus 91 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESM 166 (390)
T ss_dssp HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred HHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence 9999999999999999997654 8899999999997 6899999874 67888999999999998 999999999985
Q ss_pred cc-CCCchhhhhhcCCcEEEEcc--ChhhhccccccceeeecCH-HHHHHHHHhcC------------------------
Q 014594 259 FS-GLESRMEWVKKHDNLIVLRT--FSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ------------------------ 310 (422)
Q Consensus 259 ~~-~~~~~~~~~~~~~~~i~~~S--~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~------------------------ 310 (422)
+. .... ..+... ++...| .+|.++ +| +.|++++++ ++.+.+.....
T Consensus 167 g~~~~~~---~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
T 3b8x_A 167 GATFNNK---CAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEE 240 (390)
T ss_dssp TCEETTE---ETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTS
T ss_pred cCEECCc---cccccc-ceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCcccccccccccccccccccc
Confidence 43 2111 111111 122222 245443 33 459999875 67666544221
Q ss_pred -------CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--CceE--EEEEeCC--CCC
Q 014594 311 -------PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSNF--ILCEVTS--GMD 374 (422)
Q Consensus 311 -------~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~f--~~~~~~~--~~~ 374 (422)
.+ ..+.+...++...| ++++ ..++.+++++++.+.|++++.+.+.+. .+.+ +++.++. +.+
T Consensus 241 ~~~~~~~g~~~~~~~~~aa~~l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 317 (390)
T 3b8x_A 241 SFKFVLPGYNVRPLEMSGAIGIEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVI 317 (390)
T ss_dssp SSCBCSCCCBCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCC
T ss_pred ccceeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCccc
Confidence 01 14555555555554 4556 788888999999999998865554332 3333 5566663 467
Q ss_pred HHHHHHHHHhCCcEEEeCCC-----C-C---------C----------CCeEEEEecChhhHHHHHHHHhhh
Q 014594 375 AKKLKDDLAKMGVMIRHYNN-----K-E---------L----------KGYVRVSVGKPEHTDALMECLMHL 421 (422)
Q Consensus 375 ~~~~~~~L~~~gI~v~~~~~-----~-~---------~----------~~~iRis~~~~~~~~~l~~al~~l 421 (422)
.+++.+.|.++||.++.... . . . .+.+||++....+.++++..++.|
T Consensus 318 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 318 RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 89999999999999986321 1 0 0 135999987544445565555554
No 211
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=4.4e-24 Score=210.77 Aligned_cols=277 Identities=18% Similarity=0.169 Sum_probs=193.1
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEe-cCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKV-PRKS 201 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v-~~~~ 201 (422)
+++...++++++++++|.+ +. ++++++++++..++++++++||+|+++.++|+.+...+ +..|++++.+ +.+
T Consensus 56 ~~~~~~~l~~~la~~~g~~-~~-v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 132 (421)
T 2ctz_A 56 MNPTVDVLEKRLAALEGGK-AA-LATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE- 132 (421)
T ss_dssp BCHHHHHHHHHHHHHHTCS-EE-EEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-
T ss_pred CChHHHHHHHHHHHHhCCC-ce-EEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-
Confidence 4445689999999999965 34 45555699999999998999999999999998766554 6789999999 742
Q ss_pred CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC-ccccCCCchhhhhhcCCcEEEEc
Q 014594 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLR 279 (422)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~~~ 279 (422)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++| ... ...... ..+.++++.
T Consensus 133 ----d~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~----~~~~Di~~~ 202 (421)
T 2ctz_A 133 ----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-YLLRPL----AWGAALVTH 202 (421)
T ss_dssp ----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG----GGTCSEEEE
T ss_pred ----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-ccCCcc----ccCCeEEEE
Confidence 8999999997 689999999999999999999999999998 9999999999 533 222222 123458899
Q ss_pred cChhhhccccccceeeecC---HHH----HHHHHHh---------------------------c-CCCCCcHHHHHHHHH
Q 014594 280 TFSKRAGLAGLRVGYGAFP---LSI----IEYLWRA---------------------------K-QPYNVSVAAEVAACA 324 (422)
Q Consensus 280 S~SK~~~~~G~r~G~i~~~---~~~----~~~l~~~---------------------------~-~~~~~~~~~~~aa~~ 324 (422)
|++|.++.+|.|+|++++. .++ .+.+... . .....+++...++..
T Consensus 203 s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~ 282 (421)
T 2ctz_A 203 SLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLL 282 (421)
T ss_dssp ETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH
T ss_pred CCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 9999999899999988873 122 1222110 0 012445555555555
Q ss_pred HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594 325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YP-----------------SYSNFILCEVTSG-MDAKKLKDDLA 383 (422)
Q Consensus 325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p-----------------~~~~f~~~~~~~~-~~~~~~~~~L~ 383 (422)
.++. +. +.++..++.+++.+.|++++.+.. +| ..+..+.+.+.+. .+...+.+.|.
T Consensus 283 ~l~~---l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~ 359 (421)
T 2ctz_A 283 GMET---LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLK 359 (421)
T ss_dssp HHTT---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCS
T ss_pred Ccch---HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCC
Confidence 5533 33 556666889999999998765542 22 3466788888631 12233334333
Q ss_pred hCCcEEEeCCC-----------------------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNN-----------------------KELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~-----------------------~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
..++.++.|+. .-.++.||+|++..+ .|++.+.+++
T Consensus 360 ~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~-~~~li~~l~~ 418 (421)
T 2ctz_A 360 LISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH-VEDLKAELKE 418 (421)
T ss_dssp SSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred cceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHHH
Confidence 33444443311 011489999999754 5777776654
No 212
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.92 E-value=9.5e-24 Score=213.24 Aligned_cols=286 Identities=12% Similarity=0.056 Sum_probs=204.8
Q ss_pred HHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------CC-----C-EEEEcCCCchhHHHHHHHcCC---E
Q 014594 133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNGA---A 193 (422)
Q Consensus 133 ~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g~---~ 193 (422)
++++++++++|.+ ++++++|+|+++++..++.++.. +| + .|+++.+.|..+...++..|. +
T Consensus 136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~ 215 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN 215 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCccc
Confidence 4556668888987 77999999999999999987743 56 6 789999999999988888877 8
Q ss_pred EEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chh
Q 014594 194 VVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRM 266 (422)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~ 266 (422)
++.+|.++++.+|+++|++++++. ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+.... ...
T Consensus 216 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~ 295 (504)
T 2okj_A 216 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR 295 (504)
T ss_dssp EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence 999998778899999999999642 58999999999999999999999999998 99999999998765321 111
Q ss_pred hhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCCC-----------------------CcHHHHHH
Q 014594 267 EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYN-----------------------VSVAAEVA 321 (422)
Q Consensus 267 ~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~~-----------------------~~~~~~~a 321 (422)
..+. .....+++.+++|.++.| .++|++++++ ++++.......+|- .+.+.+.+
T Consensus 296 ~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a 374 (504)
T 2okj_A 296 HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWL 374 (504)
T ss_dssp GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHH
T ss_pred hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHH
Confidence 1111 112336777899987744 6899999875 56664332221110 13566666
Q ss_pred HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc----CCCceEEEEEeCCCC---------------CHHHHHHH
Q 014594 322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY----PSYSNFILCEVTSGM---------------DAKKLKDD 381 (422)
Q Consensus 322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~----p~~~~f~~~~~~~~~---------------~~~~~~~~ 381 (422)
+..++.. ++++ +.++..++++++.+.|++++.+.+. |..++++|...|... ...++.+.
T Consensus 375 ~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 453 (504)
T 2okj_A 375 MWKAKGT-VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKAL 453 (504)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHH
T ss_pred HHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHH
Confidence 6666754 3444 8888999999999999998655543 445555554444210 13568888
Q ss_pred HHhCCcEEEe-CCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 382 LAKMGVMIRH-YNNKELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 382 L~~~gI~v~~-~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
|.++|+.+.. ....+..+++|++++ +.++++++.++|++
T Consensus 454 L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~ 497 (504)
T 2okj_A 454 MMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER 497 (504)
T ss_dssp HHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred HHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 8888864433 221222369999997 45566666666654
No 213
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=8.2e-24 Score=205.96 Aligned_cols=280 Identities=11% Similarity=0.069 Sum_probs=197.6
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcC--CEEEEecCCC-----
Q 014594 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE--FDAAVNG--AAVVKVPRKS----- 201 (422)
Q Consensus 131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~v~~~~----- 201 (422)
..++++.++++++.+ +.+++++|++++++.++. ++++||+|++..+.|+.+. ..++..| .+++.++.+.
T Consensus 37 ~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 114 (379)
T 3ke3_A 37 MNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE 114 (379)
T ss_dssp HHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred HHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence 457888999999986 789999999999999986 4579999999999997653 3445555 4777777432
Q ss_pred ---C-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCC
Q 014594 202 ---D-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD 273 (422)
Q Consensus 202 ---~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~ 273 (422)
. ..+|++++++.+.++++++|++++++||||.+++ .+++.++++. |+++|+|+++. .. .+.. +...+
T Consensus 115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~-~~~~---~~~~~ 189 (379)
T 3ke3_A 115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC-VWLD---MKELG 189 (379)
T ss_dssp SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT-CCCC---HHHHT
T ss_pred ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC-cccc---ccccC
Confidence 1 2589999999996458999999999999999999 6666677765 99999999987 32 1111 11223
Q ss_pred cEEEEccChhhhccccccceeeecCHHHHHHHHHhc----------------------CC--CCCcHHHHHHHHHHccCC
Q 014594 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----------------------QP--YNVSVAAEVAACAALQNP 329 (422)
Q Consensus 274 ~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----------------------~~--~~~~~~~~~aa~~~L~~~ 329 (422)
.++++.|++|.++ .+.++|++++++++++.+.... .. ++.+...+.++.++|+.-
T Consensus 190 ~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 190 IDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp CSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4588889999876 3345899999999988776411 11 266777777776766531
Q ss_pred --hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC--ceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----CCC
Q 014594 330 --IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY--SNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----ELK 398 (422)
Q Consensus 330 --~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~~f~~-~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-----~~~ 398 (422)
+.++ ++++++++++++.+.|+++++....+.. +..+. +..+ + ....+.+.|.++||.+.++..+ ..+
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~-~-~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~ 346 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE-R-DDMHKGSAFAEAGLQIAAGVPLKVGEPDNF 346 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS-C-HHHHSSHHHHHTTCCCEECCCCSSCCCTTC
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC-C-cchHHHHHHHHCCeEEeCCccccccccCcC
Confidence 2234 8888899999999999988643333321 33333 3332 2 1222367788999999987642 236
Q ss_pred CeEEEEecC---hhhHHHHHHHHhh
Q 014594 399 GYVRVSVGK---PEHTDALMECLMH 420 (422)
Q Consensus 399 ~~iRis~~~---~~~~~~l~~al~~ 420 (422)
+.+||++.. .++++++.++|++
T Consensus 347 ~~lRis~~~~~t~~di~~~~~~l~~ 371 (379)
T 3ke3_A 347 KTFRLGLFGLDKLTDIDGTVERFEK 371 (379)
T ss_dssp CEEEEECCSHHHHTCHHHHHHHHHH
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHH
Confidence 899999863 4555555555543
No 214
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.92 E-value=3e-23 Score=206.98 Aligned_cols=317 Identities=14% Similarity=0.135 Sum_probs=206.2
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---hHHHH----HHHHHHcCCCCCC---EEEeCCHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---SRRLR----AALAKDSGLESDH---ILVGCGADEL 158 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~~~lr----~~la~~~~~~~~~---i~~~~G~~~a 158 (422)
+.|.|-.++|. ++|.|++++.. +. +..+||.. | ..+++ +.+++++|.+.+. .+++++++++
T Consensus 55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A 132 (490)
T 2a7v_A 55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA 132 (490)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence 34788777776 47999999987 32 33345421 1 23555 8899999987653 3556688999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEE--EEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNGAAV--VKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+..++.++++|||+|++..+.|..+.. .+...|..+ +.++.+ +++.+|++++++.+.+.++|+|+++++
T Consensus 133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s 212 (490)
T 2a7v_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence 999999999999999999998864321 223455543 344433 457899999999997567899998888
Q ss_pred CCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----
Q 014594 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----- 300 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~----- 300 (422)
+|| ...+.+++.+||+. |+++++|++|.. +...+.....+. ...+++.|+||.+ .|.|.|+++++++
T Consensus 213 ~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~ 286 (490)
T 2a7v_A 213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTL--RGARSGLIFYRKGVKAVD 286 (490)
T ss_dssp SCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGG--CSCSCEEEEEECSEEEEE
T ss_pred CCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccC--ccccchheeeccchhccc
Confidence 887 46789999999987 999999999752 221111111111 2348889999986 4678899998763
Q ss_pred ----------HHHHHHHhcCCC---CCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCce
Q 014594 301 ----------IIEYLWRAKQPY---NVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSN 363 (422)
Q Consensus 301 ----------~~~~l~~~~~~~---~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~ 363 (422)
+.+++.+...++ +++.....++..++.. +++.+..+++.++++++.+.|++.|+..+. +.+.+
T Consensus 287 ~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~ 366 (490)
T 2a7v_A 287 PKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNH 366 (490)
T ss_dssp TTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSS
T ss_pred ccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCe
Confidence 556666554432 3344444444444432 344337788899999999999998643332 24567
Q ss_pred EEEEEeCC-CCCHHHHHHHHHhCCcEEEeC----CC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 364 FILCEVTS-GMDAKKLKDDLAKMGVMIRHY----NN-KELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 364 f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~----~~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
++|+++.+ +.+..++.+.|.++||.+..+ +. +..+..|||+.. ++++++++.+++.+
T Consensus 367 lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~ 436 (490)
T 2a7v_A 367 LVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE 436 (490)
T ss_dssp EEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHH
Confidence 88999863 568888999999999999853 22 334678999762 35667777777654
No 215
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.85 E-value=3.3e-26 Score=227.03 Aligned_cols=293 Identities=14% Similarity=0.069 Sum_probs=206.8
Q ss_pred CCCCCCeEEcCCCCCC--CC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~--~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+++++||+..|..+ ++ .+|+|.+++.+ +.. ...|+.+...+|.++|+++++ ..+.+++++|+++|++.+++
T Consensus 96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik 174 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALA 174 (465)
Confidence 4567889999988764 43 47889888876 332 245677777899999999996 46789999999999999998
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHH----HcCC--EEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAA----VNGA--AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (422)
... ..+++|++..++|+.+...+. ..|+ .++.++. .|++.|++.+++ +++++|+++..++++|.+
T Consensus 175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~ 249 (465)
T 2yky_A 175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCV 249 (465)
Confidence 642 345899999999987655433 1233 2233331 378899998864 578888887656679987
Q ss_pred CC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--
Q 014594 235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-- 307 (422)
Q Consensus 235 ~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-- 307 (422)
.+ .+++.++++. |+++|+||+|. |..+. ....+..+....+.||||.+| +|+|+||+++++++++.+..
T Consensus 250 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~--~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~ 325 (465)
T 2yky_A 250 PAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG--GGAQEMLGISADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPAR 325 (465)
Confidence 76 5666666666 99999999999 74321 111222222334568999998 59999999999999998876
Q ss_pred -----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeCC-C-----
Q 014594 308 -----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVTS-G----- 372 (422)
Q Consensus 308 -----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~~-~----- 372 (422)
...+++.|+++++++.++|+.-+-.+..++++++.+++.+.|+++ +.....+..|.++++.+++ .
T Consensus 326 ~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~ 405 (465)
T 2yky_A 326 DGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAG 405 (465)
Confidence 123477889999999888864211125566666666776666654 3222346778899988763 1
Q ss_pred -------CCHHHHHHHHHhCCcEEEeCC
Q 014594 373 -------MDAKKLKDDLAKMGVMIRHYN 393 (422)
Q Consensus 373 -------~~~~~~~~~L~~~gI~v~~~~ 393 (422)
.....+.+.|+++||++.++.
T Consensus 406 ~~~~~d~~~~~~~~~~ll~~GV~v~p~~ 433 (465)
T 2yky_A 406 DVRAADQQLKELFFFHMLRKGIYLAPRG 433 (465)
Confidence 114578888999999999875
No 216
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.90 E-value=4.8e-23 Score=207.72 Aligned_cols=309 Identities=13% Similarity=0.098 Sum_probs=209.6
Q ss_pred CCHHHHHHHhc--CC-CCCCCC-CcchHH----HHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHh----c--------
Q 014594 109 PPPEVREALGQ--LK-FPYIYP-DPESRR----LRAALAKDSGLES-DHILVGCGADELIDLIMRCV----L-------- 167 (422)
Q Consensus 109 ~~~~v~~al~~--~~-~~~~y~-~~~~~~----lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l----~-------- 167 (422)
.++.+.+++.. .. ....|. .+...+ +++++++++|.++ +++++|+|+++++..++.+. +
T Consensus 112 ~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~ 191 (497)
T 2qma_A 112 LMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSI 191 (497)
T ss_dssp BHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred cHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccch
Confidence 35666666543 11 113342 233333 4666888999865 79999999999999988863 3
Q ss_pred -CC------CC-EEEEcCCCchhHHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhcC---CCe--EEEEeCCCCcc
Q 014594 168 -DP------GD-KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVERE---KPK--CIFLTSPNNPD 231 (422)
Q Consensus 168 -~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~---~~~--~i~l~~p~NPt 231 (422)
.+ |+ .|+++.+.|..+...+...|. +++.+|.++++.+|+++|++++++. +++ +|++++++|||
T Consensus 192 ~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~t 271 (497)
T 2qma_A 192 QKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDH 271 (497)
T ss_dssp HHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTT
T ss_pred hhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCC
Confidence 12 46 799999999988888888876 7999998778899999999998642 344 88888999999
Q ss_pred CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhc-CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHh
Q 014594 232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRA 308 (422)
Q Consensus 232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~ 308 (422)
|.+.+.++|.++|+. |+++++|++|..+.........+.. ....+++.|++|.++.+ .++|++++++ ..++.+...
T Consensus 272 G~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~ 350 (497)
T 2qma_A 272 GAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHH 350 (497)
T ss_dssp CCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-
T ss_pred CCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCC
Confidence 999999999999998 9999999999876532221111111 12236777899987754 6999999854 333322110
Q ss_pred cCCC--C-----C-------------cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEE
Q 014594 309 KQPY--N-----V-------------SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFIL 366 (422)
Q Consensus 309 ~~~~--~-----~-------------~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~ 366 (422)
..| . . ..+.+.++...+. .++++ +.++..++++++.+.|++++.+.+ .+..+++++
T Consensus 351 -~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~ 428 (497)
T 2qma_A 351 -ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVL 428 (497)
T ss_dssp --------------------CCSCCCTHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEE
T ss_pred -chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEE
Confidence 001 0 0 1233444445553 34455 888889999999999999865554 456677888
Q ss_pred EEeCCC-CC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 367 CEVTSG-MD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 367 ~~~~~~-~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
+++.+. .+ ..++.+.|.++|+.+.++......+++||+++ +.++++++.++|++
T Consensus 429 f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~ 491 (497)
T 2qma_A 429 FRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINM 491 (497)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 887532 12 24566778888988865433334579999983 45555666555544
No 217
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.90 E-value=5.6e-23 Score=206.65 Aligned_cols=305 Identities=11% Similarity=0.015 Sum_probs=203.9
Q ss_pred HHHHHHHhcC-CC-CCCC-CCcchHHHHH----HHHHHcCCCC---------CCEEEeCCHHHHHHHHHHHhcCC-----
Q 014594 111 PEVREALGQL-KF-PYIY-PDPESRRLRA----ALAKDSGLES---------DHILVGCGADELIDLIMRCVLDP----- 169 (422)
Q Consensus 111 ~~v~~al~~~-~~-~~~y-~~~~~~~lr~----~la~~~~~~~---------~~i~~~~G~~~al~~~~~~l~~~----- 169 (422)
..+.+++... .. ...| ..++..++++ .+++++|.+. ..+++|+|+++++..++.+..++
T Consensus 88 ~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~ 167 (486)
T 1js3_A 88 AMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRL 167 (486)
T ss_dssp HHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhh
Confidence 3455666552 22 2334 3344455554 4566678764 36899999999998888765321
Q ss_pred ----CC--------E--EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCC------eEEEEeCCCC
Q 014594 170 ----GD--------K--IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP------KCIFLTSPNN 229 (422)
Q Consensus 170 ----gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~i~l~~p~N 229 (422)
|| + |+++.++|..+...++..|++++.+|.++++.+|+++|++++++ ++ .+|++++|+|
T Consensus 168 ~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n 246 (486)
T 1js3_A 168 QAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTT 246 (486)
T ss_dssp HHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCT
T ss_pred hccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCC
Confidence 42 3 78899999999999999999999999877889999999999963 33 3888899999
Q ss_pred ccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHH-H-H
Q 014594 230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I-I 302 (422)
Q Consensus 230 PtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~-~ 302 (422)
|||.+-+.++|.++|+. |+++++|++|..+.... .. ...+. +...++.+++|.++.+ +++|+++++.+ . .
T Consensus 247 ~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~--~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~ 323 (486)
T 1js3_A 247 SCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE--FADSFNFNPHKWLLVN-FDCSAMWVKRRTDLT 323 (486)
T ss_dssp TTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc--ccCeeEEchhhhcCCC-cceEEEEEeCHHHHH
Confidence 99999999999999987 99999999998754211 11 11111 1224557889987754 88999998643 3 3
Q ss_pred HHHH-------HhcC-------------CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-c
Q 014594 303 EYLW-------RAKQ-------------PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-Y 358 (422)
Q Consensus 303 ~~l~-------~~~~-------------~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~ 358 (422)
+.+. .... .. ....+.+.++...+.. ++++ +.++..++++++.+.|++++.+.+ .
T Consensus 324 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 402 (486)
T 1js3_A 324 GAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGV-KGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA 402 (486)
T ss_dssp GGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCTTEEECS
T ss_pred HHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 3221 1000 00 1234555555555533 3455 888889999999999998865654 3
Q ss_pred CCCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594 359 PSYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 420 (422)
Q Consensus 359 p~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 420 (422)
+...+++.+++++. ....++.+.|.++|+.+.........+++|++++. .++++++.++|++
T Consensus 403 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 403 EVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp CCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 34566666777521 12477888888778654332222346799999853 3345555555443
No 218
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.90 E-value=9.8e-24 Score=211.20 Aligned_cols=319 Identities=12% Similarity=0.056 Sum_probs=204.0
Q ss_pred CCCCCCeEEcCCCCC--CCC-CCHHHHHHHhcCC------CCCCCCCcchHHHHHHHHH----HcCCCCCCEEEeCCHHH
Q 014594 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQLK------FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE 157 (422)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~~~------~~~~y~~~~~~~lr~~la~----~~~~~~~~i~~~~G~~~ 157 (422)
..+++++||+..|.. .++ .+|++.+++.+.. +...|+.....++++++++ +++...++|++++|+++
T Consensus 59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse 138 (472)
T 1ohv_A 59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC 138 (472)
T ss_dssp BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence 345778999987753 344 5899999997631 2223443334677777766 44446789999999999
Q ss_pred HHHHHHHHhc--------C-----------------CC---CEEEEcCCCchhHHHHHH-HcCCE-------------EE
Q 014594 158 LIDLIMRCVL--------D-----------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-------------VV 195 (422)
Q Consensus 158 al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~ 195 (422)
|++.+++... . || ++|++..+.|+.+...+. ..|.. .+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999998763 1 45 899999999986655443 23321 11
Q ss_pred EecCCC-----C--C-----CCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEc
Q 014594 196 KVPRKS-----D--F-----SLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLD 253 (422)
Q Consensus 196 ~v~~~~-----~--~-----~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~D 253 (422)
.+|... . + ..|++.|++.+++. ++++|++++.+|++|.+.+ .+++.++|+. |+++|+|
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 298 (472)
T 1ohv_A 219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD 298 (472)
T ss_dssp CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 222100 0 0 12688999988641 7889988887888998766 6666666665 9999999
Q ss_pred cCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCC
Q 014594 254 EAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNP 329 (422)
Q Consensus 254 eay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~ 329 (422)
|+|..|...+.. ....+.. ..+.+.||||.+ ++| ||++ ++++. .+... ...++.+++++.++.++|+.-
T Consensus 299 Ev~~g~g~~g~~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~ 371 (472)
T 1ohv_A 299 EVQTGGGSTGKFWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINII 371 (472)
T ss_dssp CTTTTTTTTSSSSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCchhccccCCC-CCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHHHH
Confidence 999977654321 1111111 002234889985 445 7776 66542 11111 123567899999888888531
Q ss_pred hHHHHHHHHHHHHHHHHHHHccC----CC-CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014594 330 IYLEVKEALIKERERLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 404 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis 404 (422)
.-.+..++++++++++.+.|+++ +. +...++.+.|+++++++..+...+.+.|+++||.+.++. .++|||+
T Consensus 372 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~iRi~ 447 (472)
T 1ohv_A 372 KREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRFR 447 (472)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEEC
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC----CCEEEEE
Confidence 11015677777888887777654 32 222334577888888632346788999999999999863 5799997
Q ss_pred ecChhhHHHHHHHHhh
Q 014594 405 VGKPEHTDALMECLMH 420 (422)
Q Consensus 405 ~~~~~~~~~l~~al~~ 420 (422)
++...+.+++++++++
T Consensus 448 ~~~~~t~e~i~~~~~~ 463 (472)
T 1ohv_A 448 PTLVFRDHHAHLFLNI 463 (472)
T ss_dssp CCTTCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 7633223444444443
No 219
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=1.4e-22 Score=205.07 Aligned_cols=287 Identities=16% Similarity=0.079 Sum_probs=201.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc-------C-CCC------EEEEcCCCchhHHHHHHHcCC---EE
Q 014594 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-------D-PGD------KIVDCPPTFTMYEFDAAVNGA---AV 194 (422)
Q Consensus 132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~-------~-~gd------~Vl~~~p~y~~~~~~~~~~g~---~~ 194 (422)
.++++++++++|.+++++++++|+++++..++.++. + +|| .|+++.+.|..+...++..|. ++
T Consensus 151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v 230 (515)
T 2jis_A 151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV 230 (515)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence 457778999999988899999999999988888653 2 575 899999999999888888888 89
Q ss_pred EEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc-hhh
Q 014594 195 VKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RME 267 (422)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~ 267 (422)
+.+|.++++.+|+++|++++.+. ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+..... ...
T Consensus 231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~ 310 (515)
T 2jis_A 231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH 310 (515)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence 99998778899999999999742 48999999999999999999999999998 999999999997653211 111
Q ss_pred hhhc-CCcEEEEccChhhhccccccceeeecCHH--HHHHHHHhcCC-----------------C------CCcHHHHHH
Q 014594 268 WVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRAKQP-----------------Y------NVSVAAEVA 321 (422)
Q Consensus 268 ~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--~~~~l~~~~~~-----------------~------~~~~~~~~a 321 (422)
.+.. .+.++++.|++|.++. +.++|+++++++ ++++......+ + ....+.+.+
T Consensus 311 ~~~g~~~aD~v~~s~hK~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~ 389 (515)
T 2jis_A 311 LLDGIQRADSVAWNPHKLLAA-GLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWL 389 (515)
T ss_dssp GGTTGGGCSEEEECTTSTTCC-CSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHH
T ss_pred hcCCCccCCEEEECcccccCC-CCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHH
Confidence 1111 1334788899998763 457999998765 66643211000 0 012444555
Q ss_pred HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCceEEEEEeCCC-------CC--------HHHHHHHHH
Q 014594 322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTSG-------MD--------AKKLKDDLA 383 (422)
Q Consensus 322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~f~~~~~~~~-------~~--------~~~~~~~L~ 383 (422)
+..++.. +.++ +.++..++++++.+.|++++.+.+. |..+.+.|...|.+ .+ ...+.+.|.
T Consensus 390 ~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 468 (515)
T 2jis_A 390 MWKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV 468 (515)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH
T ss_pred HHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH
Confidence 5555643 3344 8888999999999999998655543 33344444333421 11 012566777
Q ss_pred hCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594 384 KMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMH 420 (422)
Q Consensus 384 ~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~ 420 (422)
+.|+.+..... .+..+++||+++ +.++++++.++|++
T Consensus 469 ~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~ 510 (515)
T 2jis_A 469 KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER 510 (515)
T ss_dssp HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88876543221 223479999994 45566666666654
No 220
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=3.6e-23 Score=204.12 Aligned_cols=265 Identities=15% Similarity=0.117 Sum_probs=192.1
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhcCCCCEEEEcC-C
Q 014594 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCP-P 178 (422)
Q Consensus 111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~--i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p 178 (422)
+++++++.+. ..++.|++.+..++++.+++++|.+... ++++ |+++++..++.+++++||+|+++. |
T Consensus 38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~ 116 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGK 116 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSS
T ss_pred HHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 5666776542 1125567777889999999999975432 2344 668999999999999999999998 9
Q ss_pred CchhHHHHH----------HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHc--
Q 014594 179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE-- 245 (422)
Q Consensus 179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~-- 245 (422)
.|..+...+ +..|++++.++.++++.+|+++++++++ +++++|+++ +|+||+|...+.+++++|++
T Consensus 117 ~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~-~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la 195 (431)
T 3ht4_A 117 PYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH-SNTKMIGIQRSKGYATRPSFTISQIKEMIAFV 195 (431)
T ss_dssp CCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC-CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence 998877554 3479999999987778899999999997 689999999 69999999999888877764
Q ss_pred ----CCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHhcCC--C----CC
Q 014594 246 ----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--Y----NV 314 (422)
Q Consensus 246 ----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~~~--~----~~ 314 (422)
.|+++|+||+|..+........ .+.+++++|+||.+|. .+...||+++++++++.+...... + +.
T Consensus 196 ~~~~~~~~livDea~~~~~~~~~~~~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~ 271 (431)
T 3ht4_A 196 KEIKPDVVVFVDNCYGEFIEEQEPCH----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGA 271 (431)
T ss_dssp HHHCTTCEEEEECTTCTTSSSCCGGG----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSC
T ss_pred HhhCCCCEEEEeCCChhhccCCCccc----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCc
Confidence 3899999999998875333221 2345899999998653 224459999999999998764432 1 11
Q ss_pred cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594 315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM 385 (422)
Q Consensus 315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~ 385 (422)
+.....++...+ .... +.++..++.+++.+.|+++++. +.|.... .+.+.+++.....++++.|.+.
T Consensus 272 ~~~~~~~~~~~l---~~~~~~~~~~~~~a~~l~~~L~~~g~~-v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 272 SLYSLQEMYQGF---FLAPHVAGQALKGAIFTAAFLEKLGMN-TSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA 344 (431)
T ss_dssp CCSCSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCC-EESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhHh---hhHHHHHHHHHHHHHHHHHHHHhCcCE-ecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence 111122222222 2234 6777888899999999988753 3443332 6677876444566788888865
No 221
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.90 E-value=6.5e-22 Score=199.77 Aligned_cols=296 Identities=13% Similarity=0.070 Sum_probs=204.8
Q ss_pred CCC-CCcchHHHHHHH----HHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCchh
Q 014594 124 YIY-PDPESRRLRAAL----AKDSGLE--SDHILVGCGADELIDLIMRCVLD--------------PGDKIVDCPPTFTM 182 (422)
Q Consensus 124 ~~y-~~~~~~~lr~~l----a~~~~~~--~~~i~~~~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~ 182 (422)
..| ..++..++++++ ++++|.+ ++.+++++|+++++..++.+..+ +++.|+++.++|..
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s 204 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 204 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence 445 345556666655 5556876 46899999999999988877654 56789999999999
Q ss_pred HHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhcCC-----CeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594 183 YEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (422)
Q Consensus 183 ~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D 253 (422)
+...++..|+ +++.++.+.++.+|+++|++++++.+ +++|++++|+||||.+.+.++|.+||+. |+++++|
T Consensus 205 ~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 205 IKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 9999999998 89999988888999999999996421 8899999999999999999999999987 9999999
Q ss_pred cCCccccCC-Cchhhhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC------------------
Q 014594 254 EAYTEFSGL-ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY------------------ 312 (422)
Q Consensus 254 eay~~~~~~-~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~------------------ 312 (422)
++|...... +.....+. ......++.+++|.++.+ ..+|+++++. ++++........|
T Consensus 285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 363 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA 363 (511)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred ccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence 999865421 11111111 112246677999987744 5688887754 4555543221111
Q ss_pred -----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEe-CCCCC--------
Q 014594 313 -----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEV-TSGMD-------- 374 (422)
Q Consensus 313 -----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~-~~~~~-------- 374 (422)
....+...++..++. .++++ +.++..++.+++.+.|++++.+.+.. ...+.+.+++ |.+.+
T Consensus 364 ~~~~r~~~al~~~~al~~~g-~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~ 442 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAKG-TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQR 442 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHH
T ss_pred CCCCCchHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhH
Confidence 012344555555553 34555 88899999999999999886565432 3444455543 32221
Q ss_pred -------HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594 375 -------AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMHL 421 (422)
Q Consensus 375 -------~~~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~l 421 (422)
..++.+.|.++|+.+..... ....+++|++++ +.++++.+.++++++
T Consensus 443 ~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 443 REKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 23688888888876554221 223458999984 345566666666653
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=4.1e-22 Score=207.33 Aligned_cols=287 Identities=11% Similarity=0.107 Sum_probs=198.8
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-HHHcCCEEEEecCC-CCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDFS 204 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~~ 204 (422)
++....++++.+|+++|.+ ..+++++|+++++..++.+++++||+|+++.|+|..+... ++..|++++.++.. ++++
T Consensus 171 ~~~~i~e~e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred ChHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence 4444789999999999976 3588999999999999999999999999999999887776 77899999988743 2333
Q ss_pred ----CCHHHH-----HHHhhcCC-----C----eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCc
Q 014594 205 ----LNVELI-----ADAVEREK-----P----KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLES 264 (422)
Q Consensus 205 ----~d~~~l-----~~~i~~~~-----~----~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~ 264 (422)
+|+++| ++++++.. + |++++++| ||+|.+.+.+++.++++. |+++++||+|... .+.+.
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~ 328 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM 328 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence 688888 88886321 4 89999999 589999999999999998 9999999999753 23221
Q ss_pred -----hhhh---hhcCCcEEEEccChhhhccccccce-eeecCH------------HHHHHHHHhcCCCCCcHHHHHHHH
Q 014594 265 -----RMEW---VKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL------------SIIEYLWRAKQPYNVSVAAEVAAC 323 (422)
Q Consensus 265 -----~~~~---~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~------------~~~~~l~~~~~~~~~~~~~~~aa~ 323 (422)
.+.. ..+.++++++.|+||.+ +|.+.| ++++++ ..+..........+++....++..
T Consensus 329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~ 406 (730)
T 1c4k_A 329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD 406 (730)
T ss_dssp GGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred cCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence 1111 11234679999999974 566655 443321 112222222333455555444443
Q ss_pred HHcc---CChHHHHHHHHHHHHHHHHHHHcc-CCCCcccCC--------------------------------------C
Q 014594 324 AALQ---NPIYLEVKEALIKERERLFKLLKD-VPFLNPYPS--------------------------------------Y 361 (422)
Q Consensus 324 ~~L~---~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~--------------------------------------~ 361 (422)
++++ .+...+..+++.++.+++++.|++ ++++.+..+ .
T Consensus 407 aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 486 (730)
T 1c4k_A 407 VNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD 486 (730)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCC
Confidence 3333 212223566777788888888877 444443211 1
Q ss_pred c-eE-----EEEEeCC-----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 362 S-NF-----ILCEVTS-----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 362 ~-~f-----~~~~~~~-----------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+ ++ +.+..|+ +.++..+.+.|.++||.+...+ ...+|++++ +.++++.|.++|+++
T Consensus 487 ~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~----~~~ir~~~s~g~t~e~i~~Ll~aL~~i 562 (730)
T 1c4k_A 487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL 562 (730)
T ss_dssp TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 1 22 4566642 4678999999999999987653 478899875 456678888888764
No 223
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=188.32 Aligned_cols=301 Identities=10% Similarity=0.031 Sum_probs=210.4
Q ss_pred CCCCCCCHHHHHHHhcCCC------------CCCCCCc--chHHHHHHHHHHcCCCC-CCEEE-eCCHHHHHHHHHHHhc
Q 014594 104 ENPYGPPPEVREALGQLKF------------PYIYPDP--ESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVL 167 (422)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~------------~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~-~~G~~~al~~~~~~l~ 167 (422)
....+.|++|++++.+... .++.+.. -..+.|+.+++++++++ ++|++ ++|+|+++++++..++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence 3567789999999987311 0111111 14678999999999864 57888 5899999999999998
Q ss_pred CC--CCEEEEcCCCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594 168 DP--GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 168 ~~--gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
.+ ||+|++..-++.. +...++..|..++.++.++++..+++.++..++ +++++|.++|.+|.||.+.|. |
T Consensus 99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-~~t~lV~~~h~et~tG~~~pi-----i 172 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-PDASYVYYCANETVHGVEFDF-----I 172 (377)
T ss_dssp GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-TTCSCEEEESEETTTTEECSS-----C
T ss_pred CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-CCccEEEEeCccCchheEchh-----h
Confidence 65 8998877665543 334455678887777776666778887777776 789999999999999999997 4
Q ss_pred HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------H-Hh
Q 014594 244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------W-RA 308 (422)
Q Consensus 244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~-~~ 308 (422)
++. |+++++|.+++..... -.+...+ +++.|..|.+|.+| +|++++++++++.+ . ..
T Consensus 173 ~~~~~~~~~vD~~q~~g~~~----id~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~ 244 (377)
T 3e77_A 173 PDVKGAVLVCDMSSNFLSKP----VDVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNS 244 (377)
T ss_dssp CCCTTCCEEEECTTTTTSSC----CCGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTT
T ss_pred hccCCCEEEEEcccccCCCC----CchhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcC
Confidence 555 9999999998843321 1122333 46678899998777 78888765543211 1 11
Q ss_pred cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC----CC-ceEEEEEeCCCCC--H--
Q 014594 309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYP----SY-SNFILCEVTSGMD--A-- 375 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p----~~-~~f~~~~~~~~~~--~-- 375 (422)
..+++++....+++.++|+. ...++ +.++.++..+++++.|++++++.+.+ .. +..+.+.+++ .+ .
T Consensus 245 ~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~-~~~~~~~ 323 (377)
T 3e77_A 245 SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN-AKGDDAL 323 (377)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS-TTCCHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC-CCCchhH
Confidence 22356777776666666652 32455 88899999999999999986555322 12 2347778873 22 1
Q ss_pred -HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 376 -KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 376 -~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
..+.+.|.++||.++++.. ..+.+|+|+. +.++++.|.++|+++
T Consensus 324 ~~~~l~~l~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 324 EKRFLDKALELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp HHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 3577788889999887653 2457999986 467788888888764
No 224
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.87 E-value=8.5e-21 Score=199.05 Aligned_cols=287 Identities=14% Similarity=0.091 Sum_probs=196.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCC-
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS- 204 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~- 204 (422)
+.....++++.+++++|.+ +.+++++|+++++..++.+++++||+|+++.|+|..+...+...|++++.++.+. +++
T Consensus 203 ~~g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~ 281 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGI 281 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSC
T ss_pred CccHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccc
Confidence 3444678999999999975 4688999999999999999999999999999999988888888999999998543 233
Q ss_pred ---C-----CHHHHHHHhhc-CCCe--------EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC--
Q 014594 205 ---L-----NVELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-- 263 (422)
Q Consensus 205 ---~-----d~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~-- 263 (422)
+ |++.+++++++ ++++ +++++|| ||+|.+.+.+++.++|+. |+++++||+|..+. +.+
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~ 360 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence 4 99999999964 2444 8999998 799999999999999998 99999999997532 221
Q ss_pred ---chhhh--hh-cCCcEEEEccChhhhcccccc-ceeeecCHH-------HHHHHHHhcCCCCCcHHHHHHHHHH---c
Q 014594 264 ---SRMEW--VK-KHDNLIVLRTFSKRAGLAGLR-VGYGAFPLS-------IIEYLWRAKQPYNVSVAAEVAACAA---L 326 (422)
Q Consensus 264 ---~~~~~--~~-~~~~~i~~~S~SK~~~~~G~r-~G~i~~~~~-------~~~~l~~~~~~~~~~~~~~~aa~~~---L 326 (422)
..... .+ ..++++++.|+||.+ +|.+ .|+++++.+ ............+++.....+..++ +
T Consensus 361 ~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l 438 (755)
T 2vyc_A 361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMM 438 (755)
T ss_dssp TTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred CCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 11111 12 235678999999964 5666 556655432 1222222233345565544444444 3
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHccCCC---------Cccc-CC------------------------------------
Q 014594 327 QNPIYLEVKEALIKERERLFKLLKDVPF---------LNPY-PS------------------------------------ 360 (422)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~-p~------------------------------------ 360 (422)
...+..+..+++.++.+++++.|++++. +.+. |.
T Consensus 439 ~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (755)
T 2vyc_A 439 DGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESW 518 (755)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTT
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccc
Confidence 3321222444555555555555544321 2111 00
Q ss_pred -------Cc------eEEEEEeCC----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014594 361 -------YS------NFILCEVTS----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL 414 (422)
Q Consensus 361 -------~~------~f~~~~~~~----------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l 414 (422)
.+ .-+.+.+++ +.++..+.+.|.++||.+...+ .+.+|++++ +.++.+.|
T Consensus 519 h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~----~~~v~~~~~~g~t~~~~~~l 594 (755)
T 2vyc_A 519 HGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT----DFQIMFLFSMGVTRGKWGTL 594 (755)
T ss_dssp TCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC----SSEEEEECCTTCCTTTTHHH
T ss_pred ccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC----CCeEEEEECCCCCHHHHHHH
Confidence 11 124556653 4677899999999999886543 578999875 46667888
Q ss_pred HHHHhhh
Q 014594 415 MECLMHL 421 (422)
Q Consensus 415 ~~al~~l 421 (422)
.++|+++
T Consensus 595 ~~al~~~ 601 (755)
T 2vyc_A 595 VNTLCSF 601 (755)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888765
No 225
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.86 E-value=8.2e-21 Score=190.47 Aligned_cols=294 Identities=11% Similarity=0.034 Sum_probs=202.0
Q ss_pred CCC-CCcchHHHHHHHHH----HcCCCCC----------CEEEeCCHHHHHHHHHHHhcC-------------------C
Q 014594 124 YIY-PDPESRRLRAALAK----DSGLESD----------HILVGCGADELIDLIMRCVLD-------------------P 169 (422)
Q Consensus 124 ~~y-~~~~~~~lr~~la~----~~~~~~~----------~i~~~~G~~~al~~~~~~l~~-------------------~ 169 (422)
..| ..++..++++.+.+ .+|.+.+ ..++|+|+++++..++.+..+ +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 445 45666777776655 4576542 578999999999888775532 5
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC-----CeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
++.|+++.++|..+...+...|++++.+|.++++.+|+++|++++++.+ +.+|++++++|+||.+-+.++|.++|
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la 267 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC 267 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred CeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence 6789999999999999998899999999988888999999999996421 67788889999999999999999999
Q ss_pred cC-CCeEEEccCCccccC-CCchhhhhh-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC---------
Q 014594 245 EM-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------- 311 (422)
Q Consensus 245 ~~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~--------- 311 (422)
+. |+++++|++|..+.. .+....... ......+..+++|.++.| ..+|++++. ++.+.........
T Consensus 268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 346 (481)
T 4e1o_A 268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV 346 (481)
T ss_dssp HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence 98 999999999986532 111111111 111235667899987754 456776664 4443321111100
Q ss_pred ----------C--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHH
Q 014594 312 ----------Y--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAK 376 (422)
Q Consensus 312 ----------~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~ 376 (422)
. ....+.+.++..++.. +.++ +.++..++++++.+.|++++.+.+ .+...+++++++++ +....
T Consensus 347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~ 425 (481)
T 4e1o_A 347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGV-KNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTE 425 (481)
T ss_dssp SCCGGGGSSSSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHH
T ss_pred CCCcccccccCCCCccHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHH
Confidence 0 1134555656665543 3444 888899999999999999866664 45667888888863 22356
Q ss_pred HHHHHHHhCCc-EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594 377 KLKDDLAKMGV-MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 420 (422)
Q Consensus 377 ~~~~~L~~~gI-~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 420 (422)
++.+.|.++|+ .+.+.. ..+..++|++++. .++++++.++|++
T Consensus 426 ~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 473 (481)
T 4e1o_A 426 NVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRD 473 (481)
T ss_dssp HHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 78888887774 444332 2335689999763 3345555554443
No 226
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.86 E-value=3e-20 Score=178.62 Aligned_cols=303 Identities=13% Similarity=0.073 Sum_probs=209.4
Q ss_pred CeEEcCCCCCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHcCCC-CCCEEE-eCCHHHHH
Q 014594 96 DIVKIDANENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELI 159 (422)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~-----------~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~-~~G~~~al 159 (422)
+++.|.. .|.+.+++|++++.+. .. .++-+.. -..+.|+.++++++++ +++|++ |+|+|+++
T Consensus 5 ~~~~f~p--gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 5 RKINFSA--GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp CCEECCS--SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceEeecC--CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 3455655 4455679999999863 21 1111111 2567899999999985 457888 99999999
Q ss_pred HHHHHHhcCCCCEEE-EcCCCch-hHHHHHHHcCCEEEEecCCCCCC--CCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594 160 DLIMRCVLDPGDKIV-DCPPTFT-MYEFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (422)
Q Consensus 160 ~~~~~~l~~~gd~Vl-~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (422)
++++..++ +||+++ +....|. .+...++..|+++..++.+++.. ++++. + ++ +++++|.++|.+|.||.+.
T Consensus 83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~-~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS-DNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC-TTSSEEEEESEETTTTEEC
T ss_pred HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC-CCCCEEEEeCCCCCcceeC
Confidence 99999988 788653 3333342 33445667899999988665543 56666 3 76 7899999999999999997
Q ss_pred CHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--------
Q 014594 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-------- 307 (422)
Q Consensus 236 ~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-------- 307 (422)
+. |++.|+++++|.+++.....-. +. +-.+++.|..|.+|.+| +|++++++++++.+..
T Consensus 158 ~~-----i~~~~~~~~vD~~q~~g~~~id----~~--~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~ 224 (361)
T 3m5u_A 158 QN-----YPKTKTPLIVDASSDFFSRKVD----FS--NIALFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN 224 (361)
T ss_dssp SS-----CCCCSSCEEEECGGGTTSSCCC----CT--TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC
T ss_pred Cc-----ccccCCEEEEEcccccCCCCCC----cc--cCCEEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee
Confidence 72 5555999999999874332111 11 12377789999998777 7999999988766532
Q ss_pred -------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCC-ccc-CC---CceEEEEEeCC
Q 014594 308 -------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFL-NPY-PS---YSNFILCEVTS 371 (422)
Q Consensus 308 -------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~-p~---~~~f~~~~~~~ 371 (422)
...+++++.....++.++|+ ....++ +.++.++.++++++.|++++.+ ... +. ....+.+.+|+
T Consensus 225 ~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~ 304 (361)
T 3m5u_A 225 YLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK 304 (361)
T ss_dssp HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred hHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence 11225667766666666654 331355 8889999999999999998844 322 11 23456778874
Q ss_pred --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 372 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 372 --~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
+.+ .++...|.++||.++.+.. ..+.+|+|+. +.++++++.++|+++
T Consensus 305 ~~~~~-~~~~~~L~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 305 NKDLE-PLFVKEAEEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp CTTHH-HHHHHHHHHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred chhhh-HHHHHHHHHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 233 4788888899999887653 2256999986 467788888888765
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.86 E-value=3.5e-21 Score=186.76 Aligned_cols=300 Identities=12% Similarity=0.026 Sum_probs=201.5
Q ss_pred CCCCCCHHHHHHHhcCC-C-----------CCCCCC--cchHHHHHHHHHHcCCCC-CCEEE-eCCHHHHHHHHHHHhcC
Q 014594 105 NPYGPPPEVREALGQLK-F-----------PYIYPD--PESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLD 168 (422)
Q Consensus 105 ~~~~~~~~v~~al~~~~-~-----------~~~y~~--~~~~~lr~~la~~~~~~~-~~i~~-~~G~~~al~~~~~~l~~ 168 (422)
.+.+.+++|++++.+.. . .++.+. .-..+.|+.++++++++. ++|++ |+|+|+++++++..+++
T Consensus 34 gpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~ 113 (386)
T 3qm2_A 34 GPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLG 113 (386)
T ss_dssp SSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccC
Confidence 34556899999997631 1 011121 135789999999999854 47888 69999999999999999
Q ss_pred CCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CCHHHHHH
Q 014594 169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLK 242 (422)
Q Consensus 169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~e~l~~ 242 (422)
+||+|++..-++. .+...++..| ++..++.+ ++..+|++.++.+++ +++++|.++|.+|.||.+ .|.+++.
T Consensus 114 ~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV~~~h~et~tG~~i~pi~~i~- 190 (386)
T 3qm2_A 114 DKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-DNAAYLHYCPNETIDGIAIDETPDFG- 190 (386)
T ss_dssp TCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-TTCSCEEECSEETTTTEECCCCCCCC-
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-CCCcEEEEECCcCCcCEecCchhhhc-
Confidence 9999865444443 3334455678 88888865 333378888888886 789999999999999996 7766653
Q ss_pred HHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------HH-h
Q 014594 243 ILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-A 308 (422)
Q Consensus 243 i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~~-~ 308 (422)
.|+++++|.+++..... -.+...+ +.+.|..|.+|.+| +|++++++++++.+ .. .
T Consensus 191 ---~g~~~~vDa~qs~g~~p----idv~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~ 259 (386)
T 3qm2_A 191 ---PEVVVTADFSSTILSAP----LDVSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDND 259 (386)
T ss_dssp ---TTCCEEEECTTTTTSSC----CCGGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-
T ss_pred ---CCCEEEEEcccccCCCC----CCccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcC
Confidence 59999999998843321 1122333 45678899998777 78888876653211 11 1
Q ss_pred cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc--C--CCceEEEEEeCC-CCCHHHHH
Q 014594 309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY--P--SYSNFILCEVTS-GMDAKKLK 379 (422)
Q Consensus 309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p--~~~~f~~~~~~~-~~~~~~~~ 379 (422)
..+++++.....++.++++. ...++ +.++.++.++++++.|+++++.... + .....+.+.+++ +.+ ..+.
T Consensus 260 ~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~ 338 (386)
T 3qm2_A 260 SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-KVFL 338 (386)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-HHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-HHHH
Confidence 12235555555555555542 21355 8889999999999999988642221 1 123467778874 344 6777
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594 380 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 421 (422)
Q Consensus 380 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 421 (422)
..|.++||.++.+... .+.+|+|+. +.+++|+|.++|+++
T Consensus 339 ~~L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 339 EESFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp HHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 8888999998876432 356999986 467788888888765
No 228
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.85 E-value=3.9e-20 Score=185.17 Aligned_cols=294 Identities=8% Similarity=-0.030 Sum_probs=196.8
Q ss_pred CCC-CCcchHHHHHHH----HHHcCCCCC---------CEEEeCCHHHHHHHHHHHhcC-------------------CC
Q 014594 124 YIY-PDPESRRLRAAL----AKDSGLESD---------HILVGCGADELIDLIMRCVLD-------------------PG 170 (422)
Q Consensus 124 ~~y-~~~~~~~lr~~l----a~~~~~~~~---------~i~~~~G~~~al~~~~~~l~~-------------------~g 170 (422)
..| ..++..++++++ ++++|.+.+ ..++|+|+++++..++.+..+ ++
T Consensus 103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 182 (475)
T 3k40_A 103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK 182 (475)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence 335 445666676665 555677543 689999999998877775421 34
Q ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+.|+++.++|..+...++..|++++.+|.++++ +|+++|++++++. .+.+|++++++|+||.+.+.++|.++|+
T Consensus 183 ~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~ 261 (475)
T 3k40_A 183 LVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN 261 (475)
T ss_dssp EEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred eEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHH
Confidence 689999999999999999999999999987788 9999999999642 1677888899999999999999999998
Q ss_pred C-CCeEEEccCCccccC-CCchhhhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHH-HHHHhcC----------
Q 014594 246 M-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE-YLWRAKQ---------- 310 (422)
Q Consensus 246 ~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~-~l~~~~~---------- 310 (422)
. |+++++|++|..... .+....... ......+..+++|.++. ...+|+++++. +.+. .+.....
T Consensus 262 ~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 340 (475)
T 3k40_A 262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLV-NFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA 340 (475)
T ss_dssp HTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESSGGGC-------------------
T ss_pred HhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCC-CCceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence 7 999999999986432 111111111 11224667889997653 35577777653 3322 1110000
Q ss_pred ----CCC------CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHH
Q 014594 311 ----PYN------VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKL 378 (422)
Q Consensus 311 ----~~~------~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~ 378 (422)
.++ ...+.+.++...+....+.++.++..++++++.+.|++++.+.+ .+...+.+++++++ +....++
T Consensus 341 ~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l 420 (475)
T 3k40_A 341 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEAL 420 (475)
T ss_dssp --------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHH
T ss_pred CCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHH
Confidence 010 12344455555554333333888899999999999999866654 45567788888863 2235788
Q ss_pred HHHHHhCCcE-EEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594 379 KDDLAKMGVM-IRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 420 (422)
Q Consensus 379 ~~~L~~~gI~-v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 420 (422)
.+.|.++|+. +.+.. ..+..++|++++. .++++++.++|++
T Consensus 421 ~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 466 (475)
T 3k40_A 421 LKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSA 466 (475)
T ss_dssp HHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 8888877654 34322 2235799999863 3455555555543
No 229
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.81 E-value=7.6e-18 Score=173.93 Aligned_cols=286 Identities=10% Similarity=0.112 Sum_probs=192.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCC
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL 205 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~ 205 (422)
|..-..++++.+|+++|.+ ..+++++|++.++..++.+++++||+|+++.++|..+...+...|++++.++.+ +++++
T Consensus 193 ~~g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi 271 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred CcHHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence 4334789999999999974 467788888899999999999999999999999999988899999999999843 23443
Q ss_pred ---------CHHHHHHHhhc-CCCe---EEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCcccc-CCCch--hhhh
Q 014594 206 ---------NVELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLESR--MEWV 269 (422)
Q Consensus 206 ---------d~~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~-~~~~~--~~~~ 269 (422)
|++.+++++++ +++| ++++++| ||+|.+++.+++.++++.. .+++||+|.... +.+.. ....
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~livDEAH~~~~~f~~~~~~~~al 349 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-SIHFDSAWVPYTNFSPIYEGKCGM 349 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-EEEEECTTCTTGGGSGGGTTSSTT
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-cEEEccccccccccCCcccccccc
Confidence 89999999974 2344 8999999 9999999999999999853 379999998653 22211 1111
Q ss_pred hc---CCcE-EEEccChhhhccccc-cceeeecCHH----HHHHHHHhcCCCCCcHHHHHHHHHHccC---ChHHHHHHH
Q 014594 270 KK---HDNL-IVLRTFSKRAGLAGL-RVGYGAFPLS----IIEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEVKEA 337 (422)
Q Consensus 270 ~~---~~~~-i~~~S~SK~~~~~G~-r~G~i~~~~~----~~~~l~~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~ 337 (422)
.. .+.+ +++.|++|.++ |+ ..|+++++.+ .+++........+++.+..+++.++++. ....+++++
T Consensus 350 ~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~ 427 (715)
T 3n75_A 350 SGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING 427 (715)
T ss_dssp SSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred ccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 11 2333 56999999864 44 3578777543 3344444445556777666666555532 112225566
Q ss_pred HHHHHHHHHHHHccCC-----C-Cccc-C------------------------CCceE-----EEEEeCC----------
Q 014594 338 LIKERERLFKLLKDVP-----F-LNPY-P------------------------SYSNF-----ILCEVTS---------- 371 (422)
Q Consensus 338 ~~~~~~~l~~~L~~~~-----~-~~~~-p------------------------~~~~f-----~~~~~~~---------- 371 (422)
+.++.+++++.|++++ | +.+. + .+..+ +.+..++
T Consensus 428 l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~ 507 (715)
T 3n75_A 428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDF 507 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSS
T ss_pred HHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccC
Confidence 6666666666665442 1 1110 0 11111 3455542
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE--EEec-ChhhHHHHHHHHhhh
Q 014594 372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVR--VSVG-KPEHTDALMECLMHL 421 (422)
Q Consensus 372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR--is~~-~~~~~~~l~~al~~l 421 (422)
|..+..+.+.|+++||.+--.+. ..|= ++++ +.++.++|..+|..+
T Consensus 508 Gi~g~~~~~~L~~~~I~~E~~d~----~~vl~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 508 GIPASIVAKYLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEET----TEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEEecCC----CcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46778999999999998865441 2222 2344 456678888888765
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.73 E-value=9.8e-17 Score=158.05 Aligned_cols=314 Identities=16% Similarity=0.145 Sum_probs=201.4
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~ 164 (422)
+.+++.+||+..+. +.++ .+|+|.+|+.+ +..+..+ +.....++.+.|++.+. ..+.+.+++++++|.+.+++
T Consensus 83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-~~~~v~f~~SGsEA~e~Aik 161 (454)
T 4ao9_A 83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-QIEQLRFTNSGTEANLMALT 161 (454)
T ss_dssp ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence 45678899997663 3343 57999988876 3332222 33446789999999986 36799999999999999998
Q ss_pred Hhc--CCCCEEEEcCCCchhHHHHHHH------cCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594 165 CVL--DPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (422)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (422)
... ...++|+....+|+.....+.. .......+| .-|++.+++.+.+ +++.+|++.......|.+
T Consensus 162 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p-----~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~ 236 (454)
T 4ao9_A 162 AALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP-----YNDAQTARAQIERHGPEIAVVLVEPMQGASGCI 236 (454)
T ss_dssp HHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC-----TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCE
T ss_pred HHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCC-----CchHHHHHHHHhhcCCceEEEEeccccCCCCcc
Confidence 542 2337899988888753321100 011233333 2378899988864 357788888777778988
Q ss_pred CC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc
Q 014594 235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (422)
Q Consensus 235 ~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~ 309 (422)
.+ .+++++||+. |+++|+||++..-.+........+-.++++ +++|.+| .|+.+|.+++++++++.+....
T Consensus 237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~~~ei~~~~~~~~ 312 (454)
T 4ao9_A 237 PGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLT---TLGKYIG-GGMSFGAFGGRADVMALFDPRT 312 (454)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHHGGGCTTT
T ss_pred CCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEE---EeccccC-CCCcceeeeeHHHHHHHHhhcc
Confidence 87 6677778877 999999999974222212222233334444 5689998 7899999999999998775321
Q ss_pred ------CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCC-------
Q 014594 310 ------QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSG------- 372 (422)
Q Consensus 310 ------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~------- 372 (422)
.+|+.|+++.+++.+.|+.-+-.+..++++++.++|.+.|++ .+........|.++.+.+.++
T Consensus 313 ~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~ 392 (454)
T 4ao9_A 313 GPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSED 392 (454)
T ss_dssp CSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGG
T ss_pred CCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHH
Confidence 236778998888888775321112444445555555555543 443322334556666665321
Q ss_pred ---CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594 373 ---MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 420 (422)
Q Consensus 373 ---~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 420 (422)
.+ ...+...|+++||++.|.. .+.++.. +++++|++.+++++
T Consensus 393 ~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~ 441 (454)
T 4ao9_A 393 LAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGS 441 (454)
T ss_dssp GTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHH
Confidence 12 2356677889999987643 3444543 45566666666654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.72 E-value=3.9e-16 Score=154.35 Aligned_cols=324 Identities=13% Similarity=0.125 Sum_probs=202.8
Q ss_pred CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc----CCCCCC--CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYI--YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~--y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~ 160 (422)
+.+++.+||+..+ .+.++ .+|++.+|+.+ +.+... +|.....+|.+.|++....+ .+.+++++++++|++
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e 139 (456)
T 4atq_A 60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVE 139 (456)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHH
Confidence 4567889999776 44454 57899888865 223222 24444567888888888643 568999999999999
Q ss_pred HHHHHh--cCCCCEEEEcCCCchhHHHHHHH-cC-------------CEEEEecCCC------CCCCCHHHHHH------
Q 014594 161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS------DFSLNVELIAD------ 212 (422)
Q Consensus 161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~------~~~~d~~~l~~------ 212 (422)
.+++.- .....+|+....+|++....+.. .+ ..+..+|... ....+.+.+++
T Consensus 140 ~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e 219 (456)
T 4atq_A 140 NAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIE 219 (456)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHH
Confidence 999843 22347899999999755433322 11 1344454211 11122333333
Q ss_pred -HhhcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594 213 -AVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (422)
Q Consensus 213 -~i~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~ 284 (422)
.+..+++.+|++...+.-.|.+.+ .++++++|+. |+++|.||++..|...+.. ....+-.++++ +++|.
T Consensus 220 ~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~ 296 (456)
T 4atq_A 220 KQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII---TMAKG 296 (456)
T ss_dssp HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE---EECGG
T ss_pred HhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh---hhhhc
Confidence 222346788988877777787765 4566777776 9999999999987644432 22222334444 45799
Q ss_pred hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC-----
Q 014594 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP----- 353 (422)
Q Consensus 285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~----- 353 (422)
+| .|+.+|.+++++++.+.+.... .+|+.++++.+++.+.|+.-+-.+..++.++..+++.+.|++ ++
T Consensus 297 lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~ 375 (456)
T 4atq_A 297 IA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGS 375 (456)
T ss_dssp GG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred cc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 87 8899999999999887765432 347889999999988885311000344444444555444443 32
Q ss_pred CCcccCCCceEEEEEeCCCC-------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594 354 FLNPYPSYSNFILCEVTSGM-------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 420 (422)
Q Consensus 354 ~~~~~p~~~~f~~~~~~~~~-------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 420 (422)
.+.-....|.++.+++.... -...+.+.++++|+++.++.. .++.|||.....-+.++++++++.
T Consensus 376 ~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~ 447 (456)
T 4atq_A 376 VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV 447 (456)
T ss_dssp CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 22223456778888874221 145688889999999987542 347899996532222344444433
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.65 E-value=7.1e-15 Score=145.88 Aligned_cols=319 Identities=15% Similarity=0.143 Sum_probs=200.8
Q ss_pred CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-C---CCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-L---KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (422)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~---~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~ 160 (422)
+.+++.+||+..+. +.++ .+|++.+|+.+ + .+.+.+ +.+...+|.+.|++..+.+.+.|++++++++|++
T Consensus 63 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e 142 (473)
T 4e3q_A 63 DVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAND 142 (473)
T ss_dssp ETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHH
T ss_pred eCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHH
Confidence 45678899998774 3333 57888888765 2 221222 2223457888888888766679999999999999
Q ss_pred HHHHHhc-------CCC-CEEEEcCCCchhHHHHHH-HcCC-----------EEEEecCCC-----CCCCC--------H
Q 014594 161 LIMRCVL-------DPG-DKIVDCPPTFTMYEFDAA-VNGA-----------AVVKVPRKS-----DFSLN--------V 207 (422)
Q Consensus 161 ~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~-~~g~-----------~~~~v~~~~-----~~~~d--------~ 207 (422)
.+++... .++ .+|+....+|++....+. ..|- ..+.++... ..... .
T Consensus 143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 222 (473)
T 4e3q_A 143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLA 222 (473)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHH
Confidence 9998532 233 578888888875433322 2221 122232111 01111 2
Q ss_pred HHHHHHhhc---CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (422)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (422)
+++++.+.+ +++.+|++.....-.|.+.+. +++++||+. |+++|.||++..|...+.. ....+-.++++
T Consensus 223 ~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~- 301 (473)
T 4e3q_A 223 RELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAI- 301 (473)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEE-
T ss_pred HHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChH-
Confidence 345555432 356778887777777887763 556667766 9999999999998654432 22233344444
Q ss_pred EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK 347 (422)
Q Consensus 278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~ 347 (422)
+++|.++ .| +.+|.+++++++.+.+... ..+|+.|+++.+++.+.|+.-+-....++.++..++|.+
T Consensus 302 --t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~ 378 (473)
T 4e3q_A 302 --ISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEE 378 (473)
T ss_dssp --EECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHH
T ss_pred --Hhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHH
Confidence 3579998 55 8999999999999887542 234778999999888887531100145555666666666
Q ss_pred HHccC---CCCcccCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594 348 LLKDV---PFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 410 (422)
Q Consensus 348 ~L~~~---~~~~~~p~~~~f~~~~~~~~-----------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 410 (422)
.|+++ +.+.-....|.++-+++... .-...+.+.+.++|+++++.. +.+|+... +.++
T Consensus 379 ~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~e 453 (473)
T 4e3q_A 379 RLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEAQ 453 (473)
T ss_dssp HHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHH
T ss_pred HHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHH
Confidence 66553 33322345567777776321 114678888999999999864 68999854 4444
Q ss_pred HHHHHHHH
Q 014594 411 TDALMECL 418 (422)
Q Consensus 411 ~~~l~~al 418 (422)
+|++.+.+
T Consensus 454 id~~~~~l 461 (473)
T 4e3q_A 454 MDEMFDKL 461 (473)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.64 E-value=2e-14 Score=138.01 Aligned_cols=312 Identities=15% Similarity=0.157 Sum_probs=197.7
Q ss_pred eEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cch-HH----HHHHHHHHcCCCCC----CEEEeCCHHHH
Q 014594 97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PES-RR----LRAALAKDSGLESD----HILVGCGADEL 158 (422)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~~-~~----lr~~la~~~~~~~~----~i~~~~G~~~a 158 (422)
-|.|=..||-. ++.|++++... .+..+||. ... .+ .++...++||++.. ||-..+|+ +|
T Consensus 56 ~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs-~A 132 (490)
T 3ou5_A 56 GLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS-PA 132 (490)
T ss_dssp SEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HH
T ss_pred CceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHH-HH
Confidence 48888888866 58999999762 34444542 221 12 23344567898776 56665555 57
Q ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHH--------HHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
...++.++++|||+|+..+..+.++.... ...|. +.+.++.+ ++..+|.|++++...+.+||+|++-.-
T Consensus 133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S 212 (490)
T 3ou5_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc
Confidence 77888889999999998887765432111 11222 23333332 456799999999998889999986533
Q ss_pred CCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCC---CchhhhhhcCCcEEEEccChhhhccccccceeeecCH---
Q 014594 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--- 299 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~---~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~--- 299 (422)
. .-..++.+++++||+. |.++++|.+|.. +... ++++. + -.++..|.+|++ .|-|.|.|++++
T Consensus 213 a--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~----~-ADvVTtTTHKTL--rGPrGG~Il~~~~~~ 283 (490)
T 3ou5_A 213 A--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----H-ADIVTTTTHKTL--RGARSGLIFYRKGVK 283 (490)
T ss_dssp S--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG----T-CSEEEEESSSTT--CSCSCEEEEEECSEE
T ss_pred c--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc----c-ceEEeccccccc--cCCCceEEEeccccc
Confidence 3 3477899999999998 999999999964 2211 22322 2 237788899985 788999999865
Q ss_pred ------------HHHHHHHHhcCCCC---CcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CC
Q 014594 300 ------------SIIEYLWRAKQPYN---VSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PS 360 (422)
Q Consensus 300 ------------~~~~~l~~~~~~~~---~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~ 360 (422)
++.+++...-.|.. +..-..++...++. .+++.+-.+++.++.+.|.+.|.+.|+..+. ..
T Consensus 284 ~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgT 363 (490)
T 3ou5_A 284 AVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGT 363 (490)
T ss_dssp EECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred cccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCC
Confidence 56677776665532 11112222222222 2355557778889999999999998865443 23
Q ss_pred CceEEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594 361 YSNFILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH 420 (422)
Q Consensus 361 ~~~f~~~~~~-~~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 420 (422)
+...+++++. .+.+..+..+.|.+.||.+. |++. +..+..|||+.. .+++++++.+.|.+
T Consensus 364 dnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~ 436 (490)
T 3ou5_A 364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE 436 (490)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 3345778875 36788888888989999996 4443 334578999963 35666777666543
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.63 E-value=7.8e-16 Score=162.66 Aligned_cols=315 Identities=14% Similarity=0.185 Sum_probs=195.3
Q ss_pred CeEEcCCC--CCCCC-C-CHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHH
Q 014594 96 DIVKIDAN--ENPYG-P-PPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (422)
Q Consensus 96 ~~i~l~~~--~~~~~-~-~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~ 164 (422)
+++|+.++ .+.++ . +|++.+|+.+ + .+.. .+..+...+|.++|++..+-. .+.++++++|++|++.+++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK 460 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK 460 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence 57787765 34444 3 6888888865 2 2211 122233567888888888643 4689999999999999988
Q ss_pred Hhc-----CCC------------CEEEEcCCCchhHHHHH-HHcCC---------------EE-------------EEec
Q 014594 165 CVL-----DPG------------DKIVDCPPTFTMYEFDA-AVNGA---------------AV-------------VKVP 198 (422)
Q Consensus 165 ~l~-----~~g------------d~Vl~~~p~y~~~~~~~-~~~g~---------------~~-------------~~v~ 198 (422)
... ..| .+|+....+|++-...+ ...|. .+ ..++
T Consensus 461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 540 (831)
T 4a0g_A 461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNIS 540 (831)
T ss_dssp HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEE
T ss_pred HHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEec
Confidence 542 122 36888888887443332 22221 00 1112
Q ss_pred CCCCCC---------CC------------------HHHHHHHhhc-------CCCeEEEEeCC-CCccCcCCC----HHH
Q 014594 199 RKSDFS---------LN------------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN----DED 239 (422)
Q Consensus 199 ~~~~~~---------~d------------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~----~e~ 239 (422)
....+. -| .+.|++.+.+ .++.+|++... ++..|...+ .++
T Consensus 541 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~ 620 (831)
T 4a0g_A 541 LPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRV 620 (831)
T ss_dssp CCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHH
T ss_pred CCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHH
Confidence 111100 01 2567777642 35678888765 788888774 455
Q ss_pred HHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHh-------
Q 014594 240 LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA------- 308 (422)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~------- 308 (422)
+.++|+. |+++|+||++..|...+.. ....+..++++ +++|.++ .| +++|++++++++++.+...
T Consensus 621 l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii---tlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~ 696 (831)
T 4a0g_A 621 LVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA---CFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALL 696 (831)
T ss_dssp HHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE---EECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCC
T ss_pred HHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE---EEecccc-cCccCcEEEEECHHHHHHHhcccccccce
Confidence 6666665 9999999999988654432 22223334433 6899987 57 7999999999999887542
Q ss_pred -cCCCCCcHHHHHHHHHHcc---CChHHH-HHH---HHHH-HHHHHHHHHccCCCCcccCCCceEEEEEeCCC-------
Q 014594 309 -KQPYNVSVAAEVAACAALQ---NPIYLE-VKE---ALIK-ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG------- 372 (422)
Q Consensus 309 -~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~---~~~~-~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~------- 372 (422)
..+|+.++++++++.++|+ ++++.+ +.+ ++++ .++.+.+.+++.+.+......|.++.+++...
T Consensus 697 hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~ 776 (831)
T 4a0g_A 697 HGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYA 776 (831)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------
T ss_pred eecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccc
Confidence 2347789999988888875 233322 111 1111 12234555666665554556778888887421
Q ss_pred -CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594 373 -MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 419 (422)
Q Consensus 373 -~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 419 (422)
..+.++.+.|+++||++++.. +.+||+.. +.++++++.++++
T Consensus 777 ~~~a~~~~~~l~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~ 822 (831)
T 4a0g_A 777 SLYAKSLLIMLREDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLY 822 (831)
T ss_dssp CHHHHHHHHHHHHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence 124568888999999999764 79999854 3444444444443
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.50 E-value=9.3e-12 Score=121.51 Aligned_cols=220 Identities=12% Similarity=-0.040 Sum_probs=142.3
Q ss_pred HHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCC
Q 014594 133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFS 204 (422)
Q Consensus 133 ~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~ 204 (422)
.+...+.+.+|++.. ..++++|+|.+...++.+.+++ ++.|+++..+|......+...|+.++.++. ++.+.
T Consensus 102 ~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~ 181 (450)
T 3bc8_A 102 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELR 181 (450)
T ss_dssp HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCC
Confidence 556666666788544 4588888884444444434443 799999999999999999999999998874 45678
Q ss_pred CCHHHHHHHhhcCC--CeEEEEeCCC-CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chh-hhhhcCCcEEEE
Q 014594 205 LNVELIADAVEREK--PKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRM-EWVKKHDNLIVL 278 (422)
Q Consensus 205 ~d~~~l~~~i~~~~--~~~i~l~~p~-NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~-~~~~~~~~~i~~ 278 (422)
+|++.|++++++.+ .+++++.+|+ +.+|.+-+.+++.+||+. |+++++|+||....... ... ..+....-+.++
T Consensus 182 id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v 261 (450)
T 3bc8_A 182 TDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV 261 (450)
T ss_dssp CCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred cCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEE
Confidence 99999999997532 4555555554 556789999999999998 99999999998543211 111 111112345788
Q ss_pred ccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccC--ChHHHHHHHHHHHHHHHHHHHccCC
Q 014594 279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLEVKEALIKERERLFKLLKDVP 353 (422)
Q Consensus 279 ~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~~ 353 (422)
.|.+|.+. .....+++.. +++.++++.........+.++.......+.. ..+.+..++..+..+++.+.|++++
T Consensus 262 ~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 262 QSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp EEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 89999764 4444666665 6777776655432112222233222222222 1222254555666777777776654
No 236
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.37 E-value=5e-12 Score=122.07 Aligned_cols=243 Identities=12% Similarity=-0.010 Sum_probs=155.7
Q ss_pred CCCC-CCEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHh
Q 014594 143 GLES-DHILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV 214 (422)
Q Consensus 143 ~~~~-~~i~~~~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i 214 (422)
|++. ...++++|+|.++..++.+.+++ +|+|+++..+|..........|++++.++. ++..++|++.+++++
T Consensus 130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI 209 (501)
T 3hl2_A 130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKV 209 (501)
T ss_dssp TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHH
T ss_pred CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHH
Confidence 7754 46899999997776666666664 499999999999999999999999999984 445789999999999
Q ss_pred hcCC--CeEEEEe-CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchh-hhhhcCCcEEEEccChhhhccc
Q 014594 215 EREK--PKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM-EWVKKHDNLIVLRTFSKRAGLA 288 (422)
Q Consensus 215 ~~~~--~~~i~l~-~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~-~~~~~~~~~i~~~S~SK~~~~~ 288 (422)
++.+ ..++++. .+.|-.|.+-+.+++.+||+. |+++++|+||.... +..... ..+.....++++.|..|.+-++
T Consensus 210 ~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp 289 (501)
T 3hl2_A 210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP 289 (501)
T ss_dssp HHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC
T ss_pred HhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee
Confidence 7532 3344434 445545677899999999988 99999999998543 111111 1121122568899999987544
Q ss_pred cccceeeec-CHHHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC---CcccCCC
Q 014594 289 GLRVGYGAF-PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF---LNPYPSY 361 (422)
Q Consensus 289 G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~ 361 (422)
+..|.+.. ++++++++.... +...+.. ...++...+....|.++.++..++.+++.+.|+++.. ..+....
T Consensus 290 -IGG~ii~~~d~e~l~~~~~~y-PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~ 367 (501)
T 3hl2_A 290 -VGGAIIAGFNDSFIQEISKMY-PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTP 367 (501)
T ss_dssp -SSCEEEEESCHHHHHHHHHTS-CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCT
T ss_pred -cCceEEEeCCHHHHHHHHHhC-CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCC
Confidence 23334433 677888774432 3322222 2333333333345544777778888888888877421 2333333
Q ss_pred ce--EEEEEeCC-----CCCHHHHHHHHHhCCc
Q 014594 362 SN--FILCEVTS-----GMDAKKLKDDLAKMGV 387 (422)
Q Consensus 362 ~~--f~~~~~~~-----~~~~~~~~~~L~~~gI 387 (422)
.| -+.+.+.. +.+...+-..|-.++|
T Consensus 368 ~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~v 400 (501)
T 3hl2_A 368 HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQV 400 (501)
T ss_dssp TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTC
T ss_pred CCceeEEEecccccccccccHHHHHHHHHhcCC
Confidence 33 34455531 1224566666665543
No 237
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=69.51 E-value=39 Score=29.74 Aligned_cols=102 Identities=13% Similarity=0.032 Sum_probs=58.8
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
|.++...+++|.|+...=..+.+.|.+.|-+|++..-.-...... .+..|.++..+..|- -|.+++++.+++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv---~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDV---TDELAIEAAFSKLD 81 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT---TCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC---CCHHHHHHHHHHHH
Confidence 455544566665555444555667888998888876544333222 234677888777542 255666555432
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+...++-|--.++.+. -++.|++.++.+.
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 35666553322233333 2578888888775
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=69.24 E-value=27 Score=31.13 Aligned_cols=97 Identities=9% Similarity=0.103 Sum_probs=58.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
.-+++|.|+...=..+.+.|.+.|-.|++..-.-......++..|.+...+..|- -|.+++++.+++ .+...
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv---~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS---ANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT---TCHHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4456665555444556667889998888776555555555555677777776432 355666655532 35565
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+--.++.+. -++.|++.++.+.
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHH
Confidence 553322333333 2478889888775
No 239
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=68.72 E-value=40 Score=29.09 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=58.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++....-..........|.++..+..|- -|.+.+++.+++ .+..+
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI---SDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT---TCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHHCCCCCE
Confidence 4566666665555566667888898888776655544544444576777666432 356666665542 36777
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+--..+.+. -.+.+++.+..+.
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 765533233332 3477888777664
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=64.68 E-value=34 Score=30.31 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=59.2
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+...+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..| --|.+.+++.+++ .
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVD---VSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECC---TTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEec---CCCHHHHHHHHHHHHHHcC
Confidence 3444456776666555556666788889888776655444444444456666666643 2356666665542 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+--..+.+. ..+.+++.+..+.
T Consensus 101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 6777765532222332 3577888877664
No 241
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=63.57 E-value=37 Score=29.47 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=56.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+++ .+..
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI---SKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT---TSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecC---CCHHHHHHHHHHHHHhcCCCC
Confidence 34567766665555566666888898887766555544555555566666666432 255666655532 3667
Q ss_pred EEEEeCC-CCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSP-NNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p-~NPtG--~~~~~e~l~~i~~~ 246 (422)
.++-+.- ..+.+ ...+.+++.+..+.
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 7765522 22122 22477888777664
No 242
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=63.54 E-value=51 Score=28.93 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=57.3
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..-+++|.|+...=..+.+.|.+.|-.|++..-.-..... ..+..|.++..+..|- -|.+++++.+++ .
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv---t~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADV---SKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcC
Confidence 3445666555544455556678889888876544433322 2334688888877542 356666665532 3
Q ss_pred CCeEEEEeCC--CCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSP--NNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p--~NPtG~--~~~~e~l~~i~~~ 246 (422)
+...++ +|. ..+.+. -++.|++.++.+.
T Consensus 84 ~iDiLV-NNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 84 RIDVLC-NNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp CCCEEE-ECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCcccCCCCChhhCCHHHHHHHHHH
Confidence 566655 544 233342 3688999888775
No 243
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=59.08 E-value=49 Score=29.09 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=55.7
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCCeE
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKC 221 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~ 221 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..|- -|.+.+++.++. .+...
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV---TSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHTTSSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHhCCCCe
Confidence 34577776666555566667888898888766554444444444566666666432 356666655532 23455
Q ss_pred EEEe-CCCCccC-------cCCCHHHHHHHHcC
Q 014594 222 IFLT-SPNNPDG-------SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~-~p~NPtG-------~~~~~e~l~~i~~~ 246 (422)
++.+ ....+.+ ...+.+++.+..+.
T Consensus 107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred EEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 5544 2222222 34677777776654
No 244
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=59.00 E-value=46 Score=28.91 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=56.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..| --|.+.+++.+++ .+..
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMD---VTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC---TTCHHHHHHHHHHHHHHSSSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEee---CCCHHHHHHHHHHHHHHcCCCC
Confidence 3457777766655556667788889888776655444444444445555555543 2356666665542 2677
Q ss_pred EEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.++-+.-..+.+ .-.+.+++.+..+.
T Consensus 85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 85 ILVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 776552222222 23467777776654
No 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=56.15 E-value=46 Score=29.25 Aligned_cols=96 Identities=11% Similarity=0.110 Sum_probs=54.7
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.|+...=..+.+.|.+.|.+|++....-..........+.++..+..+ --|.+.+++.+.+ .+..++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLD---VTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECC---TTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEee---CCCHHHHHHHHHHHHHhCCCCCEE
Confidence 45666555544455566688889888776655544555555555556555543 2356666665542 367777
Q ss_pred EEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+-+.-..+.+. ..+.+++.+..+.
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHH
Confidence 65533222222 3566777766553
No 246
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=55.75 E-value=62 Score=28.29 Aligned_cols=101 Identities=19% Similarity=0.130 Sum_probs=56.6
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL---SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT---TSHHHHHHHHHHHHHHHT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec---CCHHHHHHHHHHHHHHcC
Confidence 44445566666655554556667888898887765554444455555676777666432 356666665532 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+--....+. -.+.+++.+..+.
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6777664422222222 2455666666553
No 247
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=55.61 E-value=52 Score=28.67 Aligned_cols=99 Identities=10% Similarity=0.037 Sum_probs=52.1
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
......+++|.|+...=..+.+.|.+.|..|++..-.-..........++..+..+. -|.+.+++.+++ .
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-----SCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-----TSHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 344456777766665555666678888877765543332223333345665555443 245666655532 3
Q ss_pred CCeEEEEeCC-CCccCcCCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSP-NNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p-~NPtG~~~~~e~l~~i~~~ 246 (422)
+..+++-+.- ..+.....+.+++.+..+.
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHH
Confidence 5677765522 2222234456666666654
No 248
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=55.11 E-value=62 Score=27.60 Aligned_cols=96 Identities=15% Similarity=0.212 Sum_probs=52.5
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..|- -|.+.+++.+++ .+..++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL---AHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT---TSHHHHHHHHHHHHHHHCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC---CCHHHHHHHHHHHHHhcCCCcEE
Confidence 466666665555555666888898887766554444444333343455555332 255666655532 356777
Q ss_pred EEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+-+--..+.+. -.+.+++.+..+.
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHH
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHH
Confidence 65533222222 3477777777664
No 249
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=54.79 E-value=44 Score=29.55 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=54.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..| --|.+.+++.+++ .+..+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVD---VSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECC---TTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEec---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 345665555544455566678889888876655444444444445555555533 2356666655532 36777
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+.-..+.+. -.+.+++.+..+.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 765522222222 3467888777664
No 250
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.02 E-value=64 Score=27.90 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=56.3
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.+...+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV---TDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHH
Confidence 3334566666655544556666788888887765444332222 233566777766432 356666655532
Q ss_pred -CCCeEEEEeCC-CCccCcCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSP-NNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p-~NPtG~~~~~e~l~~i~~~ 246 (422)
.+..+++-+-- ..+...-.+.+++.+..+.
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 36777765522 2222225677888777664
No 251
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=53.84 E-value=70 Score=27.69 Aligned_cols=98 Identities=8% Similarity=0.012 Sum_probs=56.4
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .+..
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI---ADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT---TCHHHHHHHHHHHHHHHSSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC---CCHHHHHHHHHHHHHHhCCCC
Confidence 34577777666555666677888898888766554444444444566666666432 356666655432 3566
Q ss_pred EEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.++-+.-..+.+. -.+.+++.+..+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6554422222222 2477788777664
No 252
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=52.96 E-value=31 Score=30.63 Aligned_cols=79 Identities=8% Similarity=0.015 Sum_probs=48.9
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEE
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCI 222 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i 222 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..| --|.+.+++.+++- +..++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---l~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELD---LQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECC---TTCHHHHHHHHHTCCCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcC---CCCHHHHHHHHHhcCCCCEE
Confidence 334567777766655566666788889888776554444444444456677766643 23678888877642 45655
Q ss_pred EEe
Q 014594 223 FLT 225 (422)
Q Consensus 223 ~l~ 225 (422)
+-+
T Consensus 91 v~n 93 (291)
T 3rd5_A 91 INN 93 (291)
T ss_dssp EEC
T ss_pred EEC
Confidence 533
No 253
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=52.71 E-value=45 Score=28.91 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=48.5
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..| --|.+.+++.+++ .+..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNAD---VTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECC---TTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCC
Confidence 3456666666555555666688889887765443333333333334455555432 2356666665532 3677
Q ss_pred EEEEeCCCCccCc------CCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDGS------IINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG~------~~~~e~l~~i~~~ 246 (422)
.++-+--..+.+. ..+.+++.+..+.
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 7765422222222 3567888777664
No 254
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=52.29 E-value=79 Score=27.20 Aligned_cols=100 Identities=14% Similarity=0.046 Sum_probs=53.5
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV---TSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHHCCC
Confidence 3344677776665555566667888887776644332223333333355555555432 356666665542 26
Q ss_pred CeEEEEeCCCCccCc--------CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--------IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--------~~~~e~l~~i~~~ 246 (422)
..+++-+.-....+. ..+.+++.+..+.
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHH
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHH
Confidence 777765532222221 2567777776553
No 255
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=51.47 E-value=75 Score=27.30 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=54.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.+...+..| --|.+.+++.+++ .+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN---VTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECC---TTCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 333456666665554455666788889888776554444444444334444444432 2356666665542 36
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+--..+.+ .-.+.+++.+..+.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 77776542222222 23477788777664
No 256
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=51.39 E-value=51 Score=28.95 Aligned_cols=97 Identities=10% Similarity=0.076 Sum_probs=55.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC------------chhH---HHHHHHcCCEEEEecCCCCCCCCHHHHH
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIA 211 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 211 (422)
..+++|.|+...=..+.+.|.+.|..|++..-. -... ....+..|.++..+..|- -|.+.++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~ 87 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV---RDRAAVS 87 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT---TCHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC---CCHHHHH
Confidence 456676666555556666788889887764322 1111 122233566777766432 3566666
Q ss_pred HHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 212 DAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
+.+++ .+..+++-+.-..+.+...+.+++.+..+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 55532 367777655333333344677888877664
No 257
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=50.22 E-value=99 Score=26.05 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=55.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++....-....... ...|.++..+..| --|.+.+++.+++ .+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD---VSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC---TTCHHHHHHHCC-HHHHHSS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEec---cCCHHHHHHHHHHHHHhcCC
Confidence 4667666655555566668888888877655543332222 2346677776643 2367777776642 36
Q ss_pred CeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
...++-+.-..+.+. -.+.+++.+..+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 777765533333333 2377778777664
No 258
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=50.19 E-value=62 Score=28.42 Aligned_cols=96 Identities=9% Similarity=0.090 Sum_probs=52.6
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..| --|.+.+++.+++ .+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTD---VTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECC---TTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEec---CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45555544444445556678889888776555444444444445555555533 2356666665532 367777
Q ss_pred EEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 223 FLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
+-+--. .+.+. -.+.+++.+..+.
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 644222 22222 3577788777664
No 259
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=49.65 E-value=1.2e+02 Score=26.55 Aligned_cols=136 Identities=12% Similarity=0.084 Sum_probs=67.1
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc--hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y--~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
++..-+++|.|+...=..+...|.+.|-.|++..-.- ..........|.+...++.|- -|.+++++.+++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVEL---QDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeec---CCHHHHHHHHHHHHHHh
Confidence 3333455555554443455566788887766543222 122222333465666666432 245555554432
Q ss_pred CCCeEEEEe-CCCCccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhh-hcCCcEEEEccChhhhcccc
Q 014594 217 EKPKCIFLT-SPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAG 289 (422)
Q Consensus 217 ~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G 289 (422)
.+...++-+ ..+.+...-.+.|++.+..+.++. ..|.......+.. ...+.+|.+.|.+=..+.++
T Consensus 82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~-------g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~ 149 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLI-------HYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN 149 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS
T ss_pred CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhH-------HHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC
Confidence 456666533 223344445678888887765321 0010000111111 23577888888765455444
No 260
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=49.38 E-value=1.1e+02 Score=26.35 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKP 219 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~ 219 (422)
..+++|.|+...-..+.+.|.+.|.+|++..-.-..... ..+..|.++..+..|- -|.+.+++.+++ .+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA---RNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHSCE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC---CCHHHHHHHHHHHHhhCCc
Confidence 456777666555556666788889888766544333222 2233577777776542 356666655532 255
Q ss_pred eEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+++-+.-....+. -.+.+++.+..+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 65554422222222 3567777776654
No 261
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=47.92 E-value=1.4e+02 Score=26.00 Aligned_cols=102 Identities=12% Similarity=0.034 Sum_probs=58.3
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
+.++...+++|.|+...=..+.+.|.+.|..|++..-.-....... +..|.++..+..| --|.+.+++.+++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D---v~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD---VTSESEIIEAFARLD 98 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC---TTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC---CCCHHHHHHHHHHHH
Confidence 3454456666666555555666678888988888765544333322 2356677766643 2356666665542
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-..+.+. -.+.+++.+..+.
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 35677665422222222 3477787777664
No 262
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=47.51 E-value=37 Score=28.84 Aligned_cols=96 Identities=10% Similarity=0.025 Sum_probs=54.4
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEe
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLT 225 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~ 225 (422)
.+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..+ --|.+.+++.+.+ .....++-+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARD---LASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECC---TTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeec---CCCHHHHHHHHHHHhhcCCEEEEe
Confidence 46777776655566666788888777776655444444444445555444432 2357777777653 223455543
Q ss_pred CCCCccCc--CCCHHHHHHHHcC
Q 014594 226 SPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 226 ~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
....+.+. -.+.+++.+..+.
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 80 AGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp CCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCcCCCCccccCCHHHHHHHHHH
Confidence 22222232 3467777776664
No 263
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=47.39 E-value=70 Score=27.34 Aligned_cols=78 Identities=9% Similarity=0.006 Sum_probs=45.3
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEEE
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIF 223 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~ 223 (422)
+...|++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+ --|.+.+++.+++. +..+++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~id~li 89 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCN---LANKEECSNLISKTSNLDILV 89 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECC---TTSHHHHHHHHHTCSCCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcC---CCCHHHHHHHHHhcCCCCEEE
Confidence 33456666665554455666788889888876655544444444444444444432 23577777777542 566666
Q ss_pred Ee
Q 014594 224 LT 225 (422)
Q Consensus 224 l~ 225 (422)
-+
T Consensus 90 ~~ 91 (249)
T 3f9i_A 90 CN 91 (249)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 264
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=46.68 E-value=1.3e+02 Score=26.05 Aligned_cols=100 Identities=16% Similarity=0.112 Sum_probs=54.3
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
.....+++|.|+...=..+.+.|.+.|..|++..-.-....... +..|.++..+..+- -|.+.+++.+++
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV---SNYEEVKKLLEAVKE 95 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHHHHHHHHHHHH
Confidence 33445677766655555666678888988876554433222222 22366666665432 356666665542
Q ss_pred --CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+......+ .-.+.+++.+..+.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 3567776442222222 12467777776654
No 265
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=46.60 E-value=1.2e+02 Score=26.45 Aligned_cols=103 Identities=7% Similarity=0.045 Sum_probs=57.7
Q ss_pred HcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-
Q 014594 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER- 216 (422)
Q Consensus 141 ~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~- 216 (422)
.+..+...+++|.|+...=..+.+.|.+.|..|++..-.-..... .....|.++..+..| --|.+.+++.+++
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---l~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD---VTQPDQVRGMLDQM 103 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECC---TTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC---CCCHHHHHHHHHHH
Confidence 445555567777766655556666788889887765544332222 223345566655543 2356666665542
Q ss_pred ----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....+. -.+.++++++.+.
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777765522222222 3467888777664
No 266
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=46.41 E-value=1e+02 Score=26.98 Aligned_cols=102 Identities=11% Similarity=0.046 Sum_probs=54.8
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh---hc
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAV---ER 216 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i---~~ 216 (422)
+.++...+++|.|+...=..+.+.|.+.|..|++....-.. ........|.++..+..+- -|.+.+++.. .+
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADL---ADLEGAANVAEELAA 103 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecC---CCHHHHHHHHHHHHh
Confidence 44544567777766655556666788889887765532211 1112223566777776432 2455554442 21
Q ss_pred -CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....+. -.+.+++.+..+.
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 36777665422222222 3477777777664
No 267
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=46.36 E-value=55 Score=28.60 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=55.9
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc-hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (422)
|.++..-+++|.|+...=..+.+.|.+.|-.|++..-.- .......+..|.+...+..|-. |.+.+++.++..+..
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~---d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA---DPLAAKDSFTDAGFD 81 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT---STTTTTTSSTTTCCC
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC---CHHHHHHHHHhCCCC
Confidence 344444455555555444555566888997777654322 2333445557888777764322 334445555445566
Q ss_pred EEEEeCCC-CccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPN-NPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~-NPtG--~~~~~e~l~~i~~~ 246 (422)
.++ +|.- ++.+ .-++.+++.++.+.
T Consensus 82 iLV-NNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 82 ILV-NNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEE-ECCCCCCCCCcccccHHHHHHHHHH
Confidence 554 4432 2222 23578888888775
No 268
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.08 E-value=1.4e+02 Score=25.74 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=54.0
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhc-
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER- 216 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~- 216 (422)
+.++...+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..|-...-+.+.+.+.+.+
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3444445666665554445566668888988877654443332222 11466776666432212223333333321
Q ss_pred -CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....+ .-.+.+++.+..+.
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 3677777552222222 23567777777664
No 269
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=45.07 E-value=1.6e+02 Score=25.71 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=54.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++.+++ .
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV---RAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 45677666655555666678888988877654443222222 22466777766432 356666655532 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+.-....+. -.+.+++.+..+.
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 6777764422222222 3577888877664
No 270
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=44.88 E-value=1.5e+02 Score=25.33 Aligned_cols=97 Identities=13% Similarity=0.001 Sum_probs=52.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc-hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.- .......+..|.++..+..|- -|.+.+++.+++ .+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV---SQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec---CCHHHHHHHHHHHHHHcCCCC
Confidence 3566766655555566666888888777643322 222222334566666665432 356666665432 3677
Q ss_pred EEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+++-+.-..+.+ .-.+.+++.+..+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 776543222222 23467777776654
No 271
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.73 E-value=1.5e+02 Score=25.84 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=54.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... +..|.++..+..| --|.+.+++.+++ .+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD---VTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECC---TTCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC---CCCHHHHHHHHHHHHHHcCC
Confidence 35666666655555566678888988877654443332222 2246667666643 2356666665532 35
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+--..+.+ .-.+.+++.+..+.
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67666442222222 23577788777664
No 272
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=44.65 E-value=1.2e+02 Score=26.45 Aligned_cols=97 Identities=9% Similarity=0.054 Sum_probs=54.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-------------CchhHH---HHHHHcCCEEEEecCCCCCCCCHHHH
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-------------TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELI 210 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-------------~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (422)
..+++|.|+...=..+.+.|.+.|.+|++..- .-.... ......+.++..+..|- -|.+.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v 88 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT---RDFDRL 88 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHH
Confidence 45666666655555666678888988776432 111122 22233566777766432 356777
Q ss_pred HHHhhc-----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 211 ADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++.+++ .+..+++-+.-..+.+. -.+.+++.+..+.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 666543 46777765422222222 3577788777664
No 273
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=44.57 E-value=1.4e+02 Score=25.20 Aligned_cols=100 Identities=9% Similarity=0.040 Sum_probs=52.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.....+++|.|+...=..+.+.|.+.|.+|++..-.-...... .+..+.++..+..+ --|.+.+++.+++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD---ITSEQELSALADFAISK 85 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC---TTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcC---CCCHHHHHHHHHHHHHh
Confidence 3334566665554444556666888888877654433222221 22245566655543 2356777666542
Q ss_pred -CCCeEEEEeCCC-CccCcCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPN-NPDGSIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~-NPtG~~~~~e~l~~i~~~ 246 (422)
.+..+++-+... .+...-.+.+++.+..+.
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 117 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYEL 117 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 367777755222 221123566777666553
No 274
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=44.31 E-value=1.6e+02 Score=25.73 Aligned_cols=99 Identities=10% Similarity=0.059 Sum_probs=55.7
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----------hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----------MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (422)
+...+++|.|+...=..+.+.|.+.|.+|++..-.-. .........|.++..+..|- -|.+.+++.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI---RDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT---TSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHH
Confidence 3345677766665555666678888988766432221 12222334577777776532 3566666655
Q ss_pred hc-----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 215 ER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++ .+...++-+--....+. -.+.+++.+..+.
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 32 36777765532222332 3577888776654
No 275
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=43.97 E-value=1.5e+02 Score=25.13 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=53.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|.+|++....-..... ..+..|.++..+..+- -|.+.+++.+++ .+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI---SDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC---CCHHHHHHHHHHHHHHcCC
Confidence 456666665554455666678889888766554433222 2233466776666432 356666665532 25
Q ss_pred CeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
...++-+.-..+.+. -.+.+++.+..+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 677765532222222 3467777776654
No 276
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=43.95 E-value=94 Score=27.09 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=53.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..|.++..+..| --|.+.+++.+++ .+...
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVD---LTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECC---TTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECC---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 456676666555556666788889887765544433344444445555555432 2356666665542 36676
Q ss_pred EEEeCCCC-c-cC--cCCCHHHHHHHHcC
Q 014594 222 IFLTSPNN-P-DG--SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~N-P-tG--~~~~~e~l~~i~~~ 246 (422)
++-+.-.. + .+ .-.+.+++.+..+.
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 66442222 2 11 13467777776654
No 277
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=43.95 E-value=1.7e+02 Score=25.87 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---cC-CEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NG-AAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g-~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
..+...+++|.|+...=..+.+.|.+.|..|++..-.-......... .+ .++..+..| --|.+.+++.+++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLD---VSDPGSCADAARTVV 114 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC---TTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe---CCCHHHHHHHHHHHH
Confidence 34444566666555544556667888898887765444333333222 23 456655543 2356666655432
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+. -.+.+++.+..+.
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 35677665432223332 3477888877764
No 278
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=43.84 E-value=1.6e+02 Score=25.54 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=52.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
.+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .+.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV---TDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCCC
Confidence 455555544444455566788898887765444333222 233477777776432 356666665532 367
Q ss_pred eEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+++-+--..+.+. -.+.+++.+..+.
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77765432222232 3477788777664
No 279
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=43.19 E-value=1e+02 Score=26.45 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=50.5
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---c--C-CEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---N--G-AAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~--g-~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-.......+. . + .++..++.|- -|.+.+++.+++
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI---TDCTKADTEIKDIHQK 84 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC---CCHHHHHHHHHHHHHh
Confidence 3466666655444556666778888887765544333332221 1 2 4455554332 256666655532
Q ss_pred -CCCeEEEEeCCC-CccCcCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPN-NPDGSIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~-NPtG~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--. .+.....+.+++.+..+.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~v 116 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEI 116 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHH
Confidence 356666644222 222224466777766654
No 280
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=42.79 E-value=1.6e+02 Score=25.16 Aligned_cols=97 Identities=15% Similarity=0.031 Sum_probs=52.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..| --|.+.+++.+++ .+..+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHD---VSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCC---TTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 345665555444455566677888888776554433333333335566666543 2356666665542 35677
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+--..+.+. ..+.+++.+..+.
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 664422222222 2466777776654
No 281
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=41.97 E-value=1.3e+02 Score=25.77 Aligned_cols=97 Identities=14% Similarity=0.005 Sum_probs=51.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .+..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV---TIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT---TCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 3566666655544556666788898877654433333333333354555555332 256666665532 36777
Q ss_pred EEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++-+-...+.+ .-.+.+++.+..+.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEI 109 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 76542222222 13466777766554
No 282
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=41.83 E-value=1.6e+02 Score=24.93 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=52.2
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEE-EEecCCCCCCCCHHHHHHHhhc----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAV-VKVPRKSDFSLNVELIADAVER----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~~d~~~l~~~i~~----~~~~ 220 (422)
...+++|.|+...-..+.+.|.+.|.+|++..-.-.......+..+.++ ..+..+ --|.+.+++.+++ .+..
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVAD---VTDAEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECC---TTCHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEe---cCCHHHHHHHHHHHHhhCCCc
Confidence 3457777665555456666678888887765544333333333334444 444432 2356777766542 3667
Q ss_pred EEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+++-+....+.+ ...+.+++.+..+.
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAV 115 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHH
Confidence 776553222222 22456666666553
No 283
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=41.55 E-value=1.3e+02 Score=26.16 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=54.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (422)
.|++|.|+...=..+.+.|.+.|-+|++..-.-......++ .+.++..+..| --|.+++++.+++ .+..++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~D---v~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGD---VADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECC---TTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEec---CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46777666655566667788999888876554433333332 34556666543 2355666655432 456666
Q ss_pred EEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+-+--.++.+. -++.|++.++.+.
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 53322233333 3477888888765
No 284
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.50 E-value=1.7e+02 Score=25.13 Aligned_cols=98 Identities=9% Similarity=0.029 Sum_probs=55.0
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
...+++|.|+...=..+.+.|.+.|..|++..-.-...... ....|.++..+..|- -|.+.+++.+.+ .
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDL---SHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC---CCHHHHHHHHHHHHHhcC
Confidence 34566665555444555666788898887765544433222 233566777666432 356666665542 3
Q ss_pred CCeEEEEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+.-. .+.|. ..+.+++.+..+.
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 67777755322 23332 2567777776654
No 285
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=41.28 E-value=1.7e+02 Score=25.08 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---c-CCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---N-GAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-......... . |.++..+..|- -|.+.+++.+++ .
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV---ATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT---TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 4567776665555566666888888877654333222222211 1 65666665432 356666665542 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+--....+. -.+.+++.+..+.
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWEL 115 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5777764422222221 2466777666553
No 286
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=40.90 E-value=1.2e+02 Score=26.01 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=51.7
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-............++..+..| --|.+.+++.+++ .+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVD---VTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECC---TTCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 334457777666555556666688888888765433333333333222233333322 2356666665542 25
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+.-..+.+ .-.+.+++.+..+.
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFDV 116 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 77766442222222 23466777776654
No 287
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.70 E-value=1.6e+02 Score=26.07 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=55.9
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
+...+++|.|+...=..+.+.|.+.|..|++..-.-....... +..|.++..+..|- -|.+.+++.+++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV---RHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC---CCHHHHHHHHHHHHHhC
Confidence 3445777766655555566668888988877655444333322 23466666666432 356666665542
Q ss_pred CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-....|. -.+.+++.+..+.
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 36777765422222222 3577777776654
No 288
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=40.22 E-value=27 Score=25.99 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=22.3
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++|++||+.++++++.|++-
T Consensus 28 ~tpsk~eirekLAk~~~~~~d~Vvv~ 53 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLNANKQVLVVD 53 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 55667899999999999999888764
No 289
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=40.20 E-value=28 Score=25.81 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=22.3
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++|+.||+.++++++.|++-
T Consensus 28 ~tpsk~eirekLAk~~~~~~~~Vvv~ 53 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLNAPLELLVIQ 53 (101)
T ss_dssp SCCCHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 56667899999999999999888764
No 290
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=39.88 E-value=1.1e+02 Score=26.71 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=54.5
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
.....+++|.|+...=..+.+.|.+.|..|++..- .-... ....+..|.++..+..|- -|.+.+++.+++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV---SQESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHH
Confidence 33445666666555445566678888988766432 22222 222333566777666432 356666665542
Q ss_pred --CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+ .-.+.+++.+..+.
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3667776542222222 23467888777664
No 291
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=39.62 E-value=1.3e+02 Score=26.26 Aligned_cols=98 Identities=11% Similarity=0.079 Sum_probs=53.5
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC----------------chhHHHH---HHHcCCEEEEecCCCCCCCC
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----------------FTMYEFD---AAVNGAAVVKVPRKSDFSLN 206 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~----------------y~~~~~~---~~~~g~~~~~v~~~~~~~~d 206 (422)
...+++|.|+...=..+.+.|.+.|..|++..-. -...... ....+.++..+..|- -|
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~ 87 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV---RD 87 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT---TC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC---CC
Confidence 3456676666555556666788889887764321 1112222 223466777666432 35
Q ss_pred HHHHHHHhhc-----CCCeEEEEeCCCCccCc---CCCHHHHHHHHcC
Q 014594 207 VELIADAVER-----EKPKCIFLTSPNNPDGS---IINDEDLLKILEM 246 (422)
Q Consensus 207 ~~~l~~~i~~-----~~~~~i~l~~p~NPtG~---~~~~e~l~~i~~~ 246 (422)
.+.+++.+++ .+..+++-+.-....+. ..+.+++.+..+.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHH
Confidence 6666665532 36777665422222222 3477888777664
No 292
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=39.50 E-value=78 Score=27.85 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..|- -|.+.+++.+++ .+..
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV---RSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT---TCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC---CCHHHHHHHHHHHHHhcCCCC
Confidence 34567776666555566667888898888776555555555555666777666432 356666655432 3566
Q ss_pred EEEEe
Q 014594 221 CIFLT 225 (422)
Q Consensus 221 ~i~l~ 225 (422)
+++-+
T Consensus 82 ~lvnn 86 (281)
T 3zv4_A 82 TLIPN 86 (281)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 66533
No 293
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=39.29 E-value=1.4e+02 Score=25.61 Aligned_cols=102 Identities=9% Similarity=-0.018 Sum_probs=54.5
Q ss_pred cCCCCCCEEEeCCH--HHHHHHHHHHhcCCCCEEEEcCCCch-----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594 142 SGLESDHILVGCGA--DELIDLIMRCVLDPGDKIVDCPPTFT-----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 142 ~~~~~~~i~~~~G~--~~al~~~~~~l~~~gd~Vl~~~p~y~-----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (422)
+......+++|.|+ ...=..+.+.|.+.|..|++..-.-. .........|.++..+..|- -|.+.+++.+
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~ 92 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV---DSYESCEKLV 92 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT---TCHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC---CCHHHHHHHH
Confidence 44544566776655 33334455557788888776533221 12223333577777776532 3566666655
Q ss_pred hc-----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 215 ER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++ .+.++++-+--..+.+. -.+.+++.+..+.
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 32 36677765522222222 2367777777654
No 294
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=39.28 E-value=1.8e+02 Score=25.73 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCCEEEEcCCCchhHHHHHHHcCCEEEEec-CCCCCCCCHHHHHH---HhhcCCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIAD---AVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~---~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~ 244 (422)
++..+++..|.|. .+++.+|.+.+.+. ...+....+.+|.+ .+++.+.++|+...-.++ ...+.|+
T Consensus 178 ~~~~~v~~H~af~---Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~la 247 (286)
T 3gi1_A 178 RSKTFVTQHTAFS---YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIAHAIA 247 (286)
T ss_dssp SCCEEEEEESCCH---HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHHHHHH
T ss_pred CCCEEEEECCchH---HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHHHH
Confidence 4677887766664 56678999988875 33344566655555 455688999987633332 4566777
Q ss_pred cC-CCeEE-EccC
Q 014594 245 EM-PILVV-LDEA 255 (422)
Q Consensus 245 ~~-~~~li-~Dea 255 (422)
+. |+.++ +|..
T Consensus 248 ~~~g~~v~~l~pl 260 (286)
T 3gi1_A 248 KSTGAKVKTLSPL 260 (286)
T ss_dssp HTTTCEEEECCCS
T ss_pred HHhCCeEEEeccc
Confidence 76 77655 4533
No 295
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=38.98 E-value=1.3e+02 Score=26.04 Aligned_cols=96 Identities=9% Similarity=0.059 Sum_probs=52.7
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC------------chhHH---HHHHHcCCEEEEecCCCCCCCCHHHH
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELI 210 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (422)
...+++|.|+...=..+.+.|.+.|..|++..-. -.... ......|.++..+..|- -|.+.+
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v 89 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV---RDRESL 89 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT---TCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHH
Confidence 3456776666555556666788889887764322 11111 12233466777766432 356666
Q ss_pred HHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594 211 ADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~ 246 (422)
++.+++ .+..+++-+.-..+.+. +.+++.+..+.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHH
Confidence 666542 36777765532222222 56777776654
No 296
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=38.42 E-value=1.7e+02 Score=24.88 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=55.4
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
+...+++|.|+...=..+.+.|.+.|.+|++....-....... +..+.++..+..|- -|.+.+++.+++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV---SDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHc
Confidence 3345677766655555666678888988877655443333222 23466777776432 356666665542
Q ss_pred CCCeEEEEeCCC---CccC--cCCCHHHHHHHHcC
Q 014594 217 EKPKCIFLTSPN---NPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 ~~~~~i~l~~p~---NPtG--~~~~~e~l~~i~~~ 246 (422)
.+...++-+.-. .+.+ ...+.+++.+..+.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 367777644211 1111 23477777776654
No 297
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=38.15 E-value=1.9e+02 Score=24.73 Aligned_cols=98 Identities=12% Similarity=-0.013 Sum_probs=53.3
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc------
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER------ 216 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------ 216 (422)
...+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++.+++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL---SSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 345777766655555666668888888776543332222221 22466766666432 356666665532
Q ss_pred CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 ~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-..+.+ .-.+.+++.+..+.
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 117 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3567666442222222 23467777776654
No 298
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=38.02 E-value=1.9e+02 Score=25.19 Aligned_cols=100 Identities=12% Similarity=0.030 Sum_probs=55.6
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
.....+++|.|+...=..+.+.|.+.|..|++..- .-......... .+.++..+..|- -|.+.+++.+++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM---TKPSEIADMMAMVA 99 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT---TCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC---CCHHHHHHHHHHHH
Confidence 33346777776665555666678888988877654 22222222211 256677666432 356666665542
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+. -.+.+++.+..+.
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 35677665422222232 2477788777664
No 299
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=37.50 E-value=1.9e+02 Score=24.55 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=53.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++.+++ .+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV---ADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 45677766655555666678888888776543332222222 22366666665432 356666665542 36
Q ss_pred CeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
..+++-+--..+.+. -.+.+++.+..+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 777765532222332 2467777777654
No 300
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.48 E-value=1.6e+02 Score=26.42 Aligned_cols=97 Identities=8% Similarity=0.027 Sum_probs=52.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC----------ch---hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----------FT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~----------y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 213 (422)
..+++|.|+...=..+.+.|.+.|..|++..-. -. .........|.++..+..+- -|.+.+++.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~ 104 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV---ADWDQAAGL 104 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT---TSHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHH
Confidence 345665555444445566678889888775422 11 22222334577777776432 356666665
Q ss_pred hhc-----CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 214 VER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 214 i~~-----~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+++ .+..+++-+.-....+ .-.+.+++.+..+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 542 3567666432222222 23577777777664
No 301
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=37.46 E-value=2e+02 Score=24.84 Aligned_cols=100 Identities=13% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-....... +..|.++..+..|- -|.+.+++.+++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL---LSRTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHH
Confidence 33345777766655555666668888888776544332222221 22466666665432 356666655532
Q ss_pred --CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+ ...+.+++.+..+.
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGT 129 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3567666442222222 22467777776654
No 302
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=37.37 E-value=1.2e+02 Score=27.61 Aligned_cols=80 Identities=21% Similarity=0.096 Sum_probs=48.3
Q ss_pred cCCCCEEEEcCCCch-------hHH---HHHHHcCCEEEEecC--C-CC-C-CCC---HHHHHHHhhcCCCeEEEEeCCC
Q 014594 167 LDPGDKIVDCPPTFT-------MYE---FDAAVNGAAVVKVPR--K-SD-F-SLN---VELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~-------~~~---~~~~~~g~~~~~v~~--~-~~-~-~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+++||+|-+..|+.. .+. ...+..|.+++.-+. . ++ + +-| .++|.+++..+.+|+|+...--
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 678999999988753 122 233458999988762 1 11 1 122 4667777777889999876544
Q ss_pred CccCcCCCHHHHHHHHcC
Q 014594 229 NPDGSIINDEDLLKILEM 246 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~~ 246 (422)
.=+-.+++.=+...|.+.
T Consensus 89 ~g~~rlL~~LD~~~i~~~ 106 (327)
T 4h1h_A 89 FNSNQLLPYLDYDLISEN 106 (327)
T ss_dssp SCGGGGGGGCCHHHHHHS
T ss_pred hhHHHHhhhcchhhhccC
Confidence 445555554334444443
No 303
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=37.19 E-value=1.8e+02 Score=24.91 Aligned_cols=97 Identities=18% Similarity=0.020 Sum_probs=50.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..| --|.+.+++.+++ .+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD---VTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECC---TTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEec---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 356676665554455666678889888765433333333333333234444432 2356666666542 26777
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+......+. -.+.+++.+..+.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDV 111 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 765422222222 2466777766654
No 304
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=37.13 E-value=1.8e+02 Score=24.78 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=50.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
.+++|.|+...=..+.+.|.+.|.+|++..-.-...... ....|.++..+..| --|.+.+++.+++ .+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVD---VSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC---TTSHHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec---CCCHHHHHHHHHHHHHHhCCC
Confidence 456666555444555666788888877654332222222 12235566666543 2356666665542 256
Q ss_pred eEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+++-+--..+.+. -.+.+++.+..+.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 77764432222222 2466777776654
No 305
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=37.11 E-value=2e+02 Score=24.97 Aligned_cols=105 Identities=10% Similarity=0.074 Sum_probs=54.3
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch---hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cC
Q 014594 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-RE 217 (422)
Q Consensus 142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~ 217 (422)
+.++...+++|.|+...=..+.+.|.+.|.+|++..-.-. .........|.++..+..+-...-+.+.+.+.+. ..
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4555556677666655555666678888988776543222 2222223356677666643221222333333332 13
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+...++-+.-....+. -.+.+++.+..+.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5676665422222222 3477777777664
No 306
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=37.10 E-value=1.9e+02 Score=24.49 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=51.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-..........|+..+.++. -|.+.+++.+++ .+..+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-----ADPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-----TCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-----CCHHHHHHHHHHHHHHcCCCCE
Confidence 35666666555445566667888988876544333333333334655544432 256666665542 35677
Q ss_pred EEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++-+.-..+.+ .-.+.+++.+..+.
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 76442222222 22466777766654
No 307
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.01 E-value=2.2e+02 Score=25.02 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=54.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL---SDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT---TSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHc
Confidence 346777766665555666678888988766543322 12222334577777776432 356666655532
Q ss_pred CCCeEEEEeCC-CCccCc--CCCHHHHHHHHcC
Q 014594 217 EKPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ~~~~~i~l~~p-~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+...++-+-- ..+.+. -.+.+++.+..+.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 35676664422 222222 2477888877764
No 308
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=36.94 E-value=2.1e+02 Score=24.81 Aligned_cols=99 Identities=5% Similarity=-0.074 Sum_probs=54.6
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc----------hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y----------~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (422)
+...+++|.|+...=..+.+.|.+.|.+|++..-.- ..........|.++..+..|- -|.+.+++.+
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDI---REEDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCT---TCHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHHHHHH
Confidence 334566766665555556667888888877643221 122222333577877777542 3566666555
Q ss_pred hc-----CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 215 ER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++ .+...++-+--....+ .-.+.+++.+..+.
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhH
Confidence 32 3667766542222222 23577777777664
No 309
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.67 E-value=1.2e+02 Score=26.40 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=52.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|..|++. ...-... ....+..|.++..+..|- -|.+.+++.+++ .
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI---RQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 345665555544455566688889887763 3222222 222334577777776532 356666665542 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+.-..+.+. -.+.+++.+..+.
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5666663322222232 2477888777664
No 310
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.02 E-value=1.7e+02 Score=25.17 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=54.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-...... ....|.++..+..|- -|.+.+++.+++ .+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI---TDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHTSC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 4566766665555556666888898887765544333322 223566777766432 356666655532 35
Q ss_pred CeEEEEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
..+++-+.-. .+.+. -.+.+++.+..+.
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 6766644212 22222 3567777777664
No 311
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=35.63 E-value=1.5e+02 Score=24.95 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=49.7
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...-..+.+.|.+.|..|++..-.-......... .+.++..+..| --|.+.+++.+++ .+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRAD---VADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECC---TTCHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEec---CCCHHHHHHHHHHHHHHhCC
Confidence 466666655444555666778887777655443333322221 24455555533 2356676666542 25
Q ss_pred CeEEEEeCCCCccCc-----CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS-----IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~-----~~~~e~l~~i~~~ 246 (422)
...++-+....+.+. ..+.+++.+..+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 113 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHH
Confidence 777765532222221 2356666666553
No 312
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=35.41 E-value=2.3e+02 Score=24.91 Aligned_cols=99 Identities=8% Similarity=0.105 Sum_probs=54.8
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC------------chhHH---HHHHHcCCEEEEecCCCCCCCCHHH
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMYE---FDAAVNGAAVVKVPRKSDFSLNVEL 209 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~ 209 (422)
+...+++|.|+...=..+.+.|.+.|..|++..-. -.... ...+..|.++..+..|- -|.+.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV---RDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC---CCHHH
Confidence 33456666666554455666688889887764322 11111 22234577777776542 35666
Q ss_pred HHHHhhc-----CCCeEEEEeCCCCccCc---CCCHHHHHHHHcC
Q 014594 210 IADAVER-----EKPKCIFLTSPNNPDGS---IINDEDLLKILEM 246 (422)
Q Consensus 210 l~~~i~~-----~~~~~i~l~~p~NPtG~---~~~~e~l~~i~~~ 246 (422)
+++.+++ .+..+++-+.-....+. -.+.+++.+..+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 6665542 36777665522222222 3477888877664
No 313
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=35.39 E-value=2.3e+02 Score=24.79 Aligned_cols=101 Identities=10% Similarity=-0.023 Sum_probs=56.0
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
..+...+++|.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV---SDELQMRNAVRDLVL 101 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHH
Confidence 33444567776666555566667888898887765544433333322 456676666432 356666665542
Q ss_pred --CCCeEEEEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-. .+.+. -.+.+++.+..+.
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 367776654222 12122 3567777777664
No 314
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=35.18 E-value=2.1e+02 Score=24.46 Aligned_cols=96 Identities=9% Similarity=-0.024 Sum_probs=52.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++. ...-...... .+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANV---GQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 45565555544455566688889887764 4443322222 223466777666432 356666665542 35
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
...++-+.-..+.+ .-.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67766543222222 23567777776654
No 315
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.17 E-value=2.1e+02 Score=24.39 Aligned_cols=97 Identities=12% Similarity=-0.012 Sum_probs=49.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc------C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER------E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~ 217 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... ....|.++..+..+ --|.+.+++.+++ .
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD---ASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC---TTSHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECC---CCCHHHHHHHHHHHHHHhCC
Confidence 4566665555444556666788888777654433222222 12235556555533 2356666666542 4
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+.-..+.+. ..+.+++.+..+.
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 122 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHIST 122 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777775532222221 2456666665553
No 316
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=35.02 E-value=2.1e+02 Score=24.96 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=51.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++ .
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV---RDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT---TCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC---CCHHHHHHHHHHHHHHcC
Confidence 4577776665555566666788888877655443322222211 255666665432 356666665542 2
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+......+. ..+.+++.+..+.
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 134 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDI 134 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 5677765432222221 3456666665543
No 317
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=34.72 E-value=2.3e+02 Score=24.59 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=56.8
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
.++...+++|.|+...=..+.+.|.+.|..|++. ...-.... ...+..|.++..+..+- -|.+.+++.+++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN---RDAEAIEQAIRETV 104 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHH
Confidence 4444567777766655566666788889887764 33322222 22233577777776532 356666665542
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....+. -.+.+++.+..+.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 36677664422222221 3477788777664
No 318
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.70 E-value=1.6e+02 Score=25.44 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=50.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..| --|.+.+++.+++ .+..+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVAD---VSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECC---TTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcC---CCCHHHHHHHHHHHHHHcCCCcE
Confidence 356676665554455666678888887765544333333333344455555533 2356666665542 35677
Q ss_pred EEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+.-....+. ..+.+++.+..+.
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRV 110 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 765422222222 2356666666553
No 319
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=34.48 E-value=2.2e+02 Score=24.34 Aligned_cols=96 Identities=15% Similarity=-0.005 Sum_probs=50.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-HHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
.+++|.|+...=..+.+.|.+.|..|++..-.-.. ....... .|.++..+..|- -|.+.+++.+++ .
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL---SKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT---TSHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC---CCHHHHHHHHHHHHHhcC
Confidence 45666555444455566678888887765543332 2222211 166666665432 356666666542 3
Q ss_pred CCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+...++-+.-..+.+ .-.+.+++.+..+.
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILAL 113 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 577776442222222 12467777776654
No 320
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.99 E-value=2.3e+02 Score=24.36 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=51.6
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---c--CCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---N--GAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~--g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+. . +.++..+..|- -|.+.+++.+++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV---SDEAQVEAYVTATTER 89 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT---TSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC---CCHHHHHHHHHHHHHH
Confidence 34567766655555566666888888877654333222222211 1 55666665432 356666665542
Q ss_pred -CCCeEEEEeCCCCcc-C--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPD-G--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPt-G--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+. + .-.+.+++.+..+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI 123 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 356766644221111 2 12466777776554
No 321
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=33.78 E-value=2.2e+02 Score=24.26 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=51.7
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
.+++|.|+...=..+.+.|.+.|.+|++..-.-......... .+.++..+..|- -|.+.+++.+++ .+.
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV---RNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT---TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcCCC
Confidence 455555554444455666788898887765444333333222 355666666432 356666655532 356
Q ss_pred eEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+++-+--....+ ...+.+++.+..+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 7666442222222 23567777776664
No 322
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=33.78 E-value=2.2e+02 Score=24.28 Aligned_cols=88 Identities=9% Similarity=0.030 Sum_probs=52.1
Q ss_pred EEEeCCHHHHHHHHHHHhcCC--C-CEE-EEcC-CCchhHHHHHHHcCCEEEEecCCCCCCCC----HHHHHHHhhcCCC
Q 014594 149 ILVGCGADELIDLIMRCVLDP--G-DKI-VDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLN----VELIADAVEREKP 219 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~--g-d~V-l~~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d----~~~l~~~i~~~~~ 219 (422)
+++.+|..+.+..++..+.+. + +.+ ++.+ |.- .....|+..|+.+..++.. ++. + -+++.+.+++.++
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~-~~~~~A~~~gIp~~~~~~~-~~~-~r~~~~~~~~~~l~~~~~ 102 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADA-YGLERARRAGVDALHMDPA-AYP-SRTAFDAALAERLQAYGV 102 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC-HHHHHHHHTTCEEEECCGG-GSS-SHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch-HHHHHHHHcCCCEEEECcc-ccc-chhhccHHHHHHHHhcCC
Confidence 455556556666777766654 2 222 2333 332 2345678899998876532 111 1 1345556666789
Q ss_pred eEEEEeCCCCccCcCCCHHHHHHH
Q 014594 220 KCIFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~e~l~~i 243 (422)
.+|++.. .|.+++.+-+...
T Consensus 103 Dliv~ag----y~~IL~~~~l~~~ 122 (229)
T 3auf_A 103 DLVCLAG----YMRLVRGPMLTAF 122 (229)
T ss_dssp SEEEESS----CCSCCCHHHHHHS
T ss_pred CEEEEcC----hhHhCCHHHHhhc
Confidence 9998765 5788888777554
No 323
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=33.59 E-value=1.6e+02 Score=24.95 Aligned_cols=96 Identities=7% Similarity=0.080 Sum_probs=52.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++... .-.... ...+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV---ADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcCC
Confidence 4666665555445566678888988766432 222222 22333566777666432 356666665542 36
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
...++-+--..+.+ .-.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77776542222222 23477888777664
No 324
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=33.50 E-value=1.9e+02 Score=24.97 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=51.6
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.....+++|.|+...-..+.+.|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC---SNREDIYSSAKKVKAE 105 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC---CCHHHHHHHHHHHHHH
Confidence 3345677776665555566666788888877655433322222 222355666665432 356666665532
Q ss_pred -CCCeEEEEeCCCCccCcC--CCHHHHHHHHc
Q 014594 217 -EKPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG~~--~~~e~l~~i~~ 245 (422)
.+..+++-+....+.+.. .+.+++.+..+
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~ 137 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFE 137 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHH
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 356777655322222322 23455555544
No 325
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=33.41 E-value=2.4e+02 Score=24.50 Aligned_cols=97 Identities=9% Similarity=0.057 Sum_probs=52.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..| --|.+.+++.+++ .+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D---l~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD---VSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECC---TTCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECC---CCCHHHHHHHHHHHHHhcCC
Confidence 4577776655555556667888898887644222222222 12236666666543 2356777666532 35
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+.-..+.+ ...+.+++.+..+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRT 151 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 67776553222222 22466777776554
No 326
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=33.30 E-value=30 Score=25.96 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=21.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++|+.||+.++++++.|++-
T Consensus 37 ~tpsk~eirekLA~~~~~~~d~Vvv~ 62 (107)
T 2v94_A 37 PTPSRKDVKGKLVAMLDLNPETTVIQ 62 (107)
T ss_dssp CCCCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999998888764
No 327
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=33.13 E-value=2e+02 Score=24.89 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=53.7
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-------------CchhHH---HHHHHcCCEEEEecCCCCCCCCHHH
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-------------TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVEL 209 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-------------~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~ 209 (422)
...+++|.|+...=..+.+.|.+.|.+|++..- .-.... ...+..|.++..+..|- -|.+.
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~ 91 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV---RDDAA 91 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT---TCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHH
Confidence 345667666655555666678888988776432 111111 22233566777666432 35666
Q ss_pred HHHHhhc-----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 210 IADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 210 l~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+++.+++ .+..+++-+.-....+. -.+.+++.+..+.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6665542 36777765422222222 2477788777664
No 328
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=32.45 E-value=1.9e+02 Score=24.83 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=52.6
Q ss_pred CCCCEEEeCCH-HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 145 ESDHILVGCGA-DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 145 ~~~~i~~~~G~-~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
+...+++|.|+ ...=..+.+.|.+.|..|++..-.-.......+. .+.++..+..|- -|.+.+++.+++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV---TSTEAVDALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC---CCHHHHHHHHHHHHH
Confidence 33456777664 3233444555778888887765444333322221 234566665432 256666665532
Q ss_pred --CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+...++-+.-..+.+. -.+.+++.+..+.
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 36677765532222222 3477777777664
No 329
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=32.38 E-value=2.5e+02 Score=24.32 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=54.5
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC------------chhH---HHHHHHcCCEEEEecCCCCCCCCHHHH
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMY---EFDAAVNGAAVVKVPRKSDFSLNVELI 210 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (422)
...+++|.|+...=..+.+.|.+.|.+|++..-. -... ....+..|.++..+..|- -|.+.+
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v 86 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV---KDRAAL 86 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHH
Confidence 3456776666555556666788889887764432 1111 122234567777776432 356666
Q ss_pred HHHhhc-----CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 211 ADAVER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
++.+++ .+..+++-+.-..+.+ .-.+.+++.+..+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 665542 3677776542222222 23577888777664
No 330
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=32.19 E-value=2.9e+02 Score=25.08 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=53.6
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----------hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----------MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (422)
...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv---~d~~~v~~~~~ 121 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV---RDEQQISAAVE 121 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHH
Confidence 345666666555445566668888987766432211 22233344677887776532 35666666654
Q ss_pred c-----CCCeEEEEeCCCCccC--cCCCHHHHHHHHc
Q 014594 216 R-----EKPKCIFLTSPNNPDG--SIINDEDLLKILE 245 (422)
Q Consensus 216 ~-----~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~ 245 (422)
+ .+..+++-+--....+ ...+.+++.++.+
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2 3677776552222222 2346677776655
No 331
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.88 E-value=2.6e+02 Score=24.38 Aligned_cols=97 Identities=12% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++ .+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV---GDEALHEALVELAVRRFGG 85 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 3456655555444555666888898888876554433333322 356676666432 356666655532 35
Q ss_pred CeEEEEeCC-CCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p-~NPtG~--~~~~e~l~~i~~~ 246 (422)
..+++-+-- ..+.+. -.+.+++.+..+.
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 676664422 222222 3577778777664
No 332
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=31.77 E-value=1.6e+02 Score=26.30 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=53.2
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC------------chhHH---HHHHHcCCEEEEecCCCCCCCCHHHH
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELI 210 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (422)
...+++|.|+...=..+.+.|.+.|..|++..-. -.... ......|.++..+..|- -|.+.+
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v 122 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV---RDLASL 122 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHH
Confidence 3456666655544455666688889887764221 11111 22233577777776432 356666
Q ss_pred HHHhhc-----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 211 ADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
++.+++ .+..+++-+--....+. -.+.+++.+..+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 665542 36777765422222222 3477888777664
No 333
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.74 E-value=2.5e+02 Score=24.27 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=52.1
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
...+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV---RSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHHhC
Confidence 34577776665554556666788888777654333222222 222366666665432 356666665542 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+..+++-+.-..+.+. -.+.+++.+..+.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 129 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVET 129 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 5677664422222221 2466777776654
No 334
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=31.65 E-value=2e+02 Score=24.54 Aligned_cols=96 Identities=14% Similarity=0.021 Sum_probs=50.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh--HHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM--YEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
.+++|.|+...=..+.+.|.+.|..|++..-.-.. ..... +..|.++..+..|- -|.+.+++.+++ .
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV---TDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHhC
Confidence 45666655544455566677788777765432222 22222 22355666665432 356666665532 3
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
+...++-+....+.+. -.+.+++.+..+.
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSV 111 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 5676664422222222 2467777776664
No 335
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=31.60 E-value=1.4e+02 Score=26.86 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=46.1
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
+.++|.+..|-.+++..+-.. . |+.+|.++.-++....... ..|+.++.++ +++++.+++.++.-+.++.+.
T Consensus 186 kdNHi~~~G~i~~Av~~~r~~-~-p~~~ieVEvdtlde~~eAl-~aGaD~I~LD-----n~~~~~l~~av~~i~~~v~ie 257 (298)
T 3gnn_A 186 KENHIAAAGGVGEALDAAFAL-N-AEVPVQIEVETLDQLRTAL-AHGARSVLLD-----NFTLDMMRDAVRVTEGRAVLE 257 (298)
T ss_dssp ---------CHHHHHHHHHHH-C---CCCEEEESSHHHHHHHH-HTTCEEEEEE-----SCCHHHHHHHHHHHTTSEEEE
T ss_pred eHHHHHHcCCHHHHHHHHHHh-C-CCCCEEEEeCCHHHHHHHH-HcCCCEEEEC-----CCCHHHHHHHHHHhCCCCeEE
Confidence 455677777777777665443 2 3445666666665544433 3688888776 467888887765322333332
Q ss_pred eCCCCccCcCCCHHHHHHHHcCCC
Q 014594 225 TSPNNPDGSIINDEDLLKILEMPI 248 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~~~ 248 (422)
. +|- .+++.+.++++.|+
T Consensus 258 a-----SGG-I~~~~i~~~a~tGV 275 (298)
T 3gnn_A 258 V-----SGG-VNFDTVRAIAETGV 275 (298)
T ss_dssp E-----ESS-CSTTTHHHHHHTTC
T ss_pred E-----EcC-CCHHHHHHHHHcCC
Confidence 2 222 25567777777655
No 336
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.17 E-value=2.2e+02 Score=23.88 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=50.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcC---CEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG---AAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g---~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-....... +..+ ..++.++.+ .-|.+.+++.+++
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d---~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE---NATAQQYRELAARVEHE 91 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT---TCCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc---cCCHHHHHHHHHHHHHh
Confidence 35666665554445566668888988877655443333222 2222 334444332 2355665555432
Q ss_pred -CCCeEEEEeCCC-CccCc--CCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~-NPtG~--~~~~e~l~~i~~~ 246 (422)
.+...++.+.-. .+.+. ..+.+++.+..+.
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 367777655222 23222 3467777777664
No 337
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=30.85 E-value=2.7e+02 Score=24.36 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=55.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC-c-h---hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-F-T---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~-y-~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
...+++|.|+...=..+.+.|.+.|..|++..-. - . ......+..|.++..+..|- -|.+.+++.+++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL---SDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCT---TSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecC---CCHHHHHHHHHHHHHH
Confidence 3467777666655566666788889888765433 1 1 12222334677777776432 356666655532
Q ss_pred -CCCeEEEEeCCC-CccC--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPN-NPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~-NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-. .+.+ .-.+.+++.+..+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 367777654222 2222 23577888887765
No 338
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=30.41 E-value=27 Score=25.72 Aligned_cols=26 Identities=19% Similarity=0.542 Sum_probs=21.5
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++|+.||+.++++++.|++-
T Consensus 29 ~tpsk~eirekLA~~~~~~~~~vvv~ 54 (98)
T 2g1d_A 29 RTPSREEIKELIAKHEGVDKELVIVD 54 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECC
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999988888763
No 339
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=30.14 E-value=2.5e+02 Score=23.69 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=50.5
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++..- .-...... .+..|.++..+..| --|.+.+++.+++ .+
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRAD---VANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC---TTCHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcC---CCCHHHHHHHHHHHHHHcCC
Confidence 4566655544445555667888888776433 32222222 22246666666543 2356666666542 36
Q ss_pred CeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
..+++-+--..+.+. -.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 777764422222222 3467777776654
No 340
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=29.95 E-value=2.3e+02 Score=24.27 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=53.7
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH---HcC-CEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNG-AAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g-~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
....+++|.|+...=..+.+.|.+.|..|++..-.-........ ..+ .++..+..|- -|.+.+++.+++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV---SDRAQCDALAGRAVEE 85 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT---TSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC---CCHHHHHHHHHHHHHH
Confidence 33456666665554455666688889888776544433332222 223 4566665432 356666655532
Q ss_pred -CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+ .-.+.+++.+..+.
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3677776552222222 23477777777664
No 341
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=29.87 E-value=2.8e+02 Score=24.15 Aligned_cols=26 Identities=8% Similarity=-0.000 Sum_probs=11.3
Q ss_pred CEEEEcCCCc---hhHHHHHHHcCCEEEE
Q 014594 171 DKIVDCPPTF---TMYEFDAAVNGAAVVK 196 (422)
Q Consensus 171 d~Vl~~~p~y---~~~~~~~~~~g~~~~~ 196 (422)
|.+++++--+ ..+...++.+|..++.
T Consensus 118 dG~IipDLP~eE~~~~~~~~~~~Gl~~I~ 146 (252)
T 3tha_A 118 CALIVPELSFEESDDLIKECERYNIALIT 146 (252)
T ss_dssp EEEECTTCCGGGCHHHHHHHHHTTCEECE
T ss_pred CEEEeCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 4455444333 2333344445555444
No 342
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=29.60 E-value=2.3e+02 Score=24.50 Aligned_cols=97 Identities=10% Similarity=0.011 Sum_probs=51.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..+ --|.+.+++.+++ .+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN---VNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECC---TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 3456655555444555666888898887765544332222 22345555555432 2356666665542 35
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+--....+ .-.+.+++.+..+.
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 67666442222222 23577888777664
No 343
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=29.51 E-value=1.6e+02 Score=26.38 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=51.2
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (422)
+.++|.+..|-.+++..+-. . .|..+|.++.-++....... ..|+.++.++ +++++.+++....-+.++.+.
T Consensus 175 kdNHi~~~G~i~~Av~~ar~-~-~~~~~IeVEv~tl~ea~eAl-~aGaD~I~LD-----n~~~~~l~~av~~~~~~v~ie 246 (287)
T 3tqv_A 175 KENHIRSAGGIAKAVTKAKK-L-DSNKVVEVEVTNLDELNQAI-AAKADIVMLD-----NFSGEDIDIAVSIARGKVALE 246 (287)
T ss_dssp CTTTC----CHHHHHHHHHH-H-CTTSCEEEEESSHHHHHHHH-HTTCSEEEEE-----SCCHHHHHHHHHHHTTTCEEE
T ss_pred eHHHHHHhCCHHHHHHHHHh-h-CCCCcEEEEeCCHHHHHHHH-HcCCCEEEEc-----CCCHHHHHHHHHhhcCCceEE
Confidence 44567777777888877644 3 35566777776775444433 4688888876 467788887764322222222
Q ss_pred eCCCCccCcCCCHHHHHHHHcCCC
Q 014594 225 TSPNNPDGSIINDEDLLKILEMPI 248 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~~~~~ 248 (422)
. +|- .+.+.+.++++.|+
T Consensus 247 a-----SGG-It~~~i~~~a~tGV 264 (287)
T 3tqv_A 247 V-----SGN-IDRNSIVAIAKTGV 264 (287)
T ss_dssp E-----ESS-CCTTTHHHHHTTTC
T ss_pred E-----ECC-CCHHHHHHHHHcCC
Confidence 2 222 24567778877654
No 344
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=29.45 E-value=2.7e+02 Score=23.86 Aligned_cols=101 Identities=14% Similarity=0.039 Sum_probs=55.8
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc---hhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc
Q 014594 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER 216 (422)
Q Consensus 143 ~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y---~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 216 (422)
.++...+++|.|+...=..+.+.|.+.|.+|++..-.- ..... ..+..|.++..+..|- -|.+.+++.+++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~ 84 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL---SNEEEVAKLFDF 84 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC---CSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHH
Confidence 34445677776666555566677888998887743211 11221 2223477777777542 356666665542
Q ss_pred -----CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 -----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -----~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-....+. -.+.+++.+..+.
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 35666664422222222 3467788777664
No 345
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=29.16 E-value=2.7e+02 Score=23.82 Aligned_cols=100 Identities=11% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCC-EEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGA-AVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~-~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
.+...+++|.|+...=..+.+.|.+.|..|++..-.-.......+. .+. ++..+..|- -|.+.+++.+++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV---LDALQVRAFAEACE 82 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT---TCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC---CCHHHHHHHHHHHH
Confidence 3344567776666555566667888898887765444333222211 333 366665432 355666555432
Q ss_pred ---CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+. -.+.+++.+..+.
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 35677665432232232 3567888777664
No 346
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=29.11 E-value=2e+02 Score=22.96 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=20.9
Q ss_pred HHHHHHHHHcCCCCCCE-EEeCCHHHHHHHHHHH-hcCCCCEEEEcCC
Q 014594 133 RLRAALAKDSGLESDHI-LVGCGADELIDLIMRC-VLDPGDKIVDCPP 178 (422)
Q Consensus 133 ~lr~~la~~~~~~~~~i-~~~~G~~~al~~~~~~-l~~~gd~Vl~~~p 178 (422)
.+++.+......+ .+| +++.|++..+..-+.. +..-|..+....+
T Consensus 37 ~i~~~~~~i~~a~-~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~ 83 (183)
T 2xhz_A 37 NFTLACEKMFWCK-GKVVVMGMGASGHIGRKMAATFASTGTPSFFVHP 83 (183)
T ss_dssp HHHHHHHHHHTCS-SCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCT
T ss_pred HHHHHHHHHHhCC-CeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCc
Confidence 5555554444532 255 4555655554433332 3344544544443
No 347
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=29.11 E-value=2.2e+02 Score=24.18 Aligned_cols=95 Identities=12% Similarity=0.048 Sum_probs=49.2
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEE
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIF 223 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~ 223 (422)
+++|.|+...-..+.+.|.+.|..|++..-.-..........+.++..+..| --|.+.+++.+++ .+...++
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD---VRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC---TTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcC---CCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4555544433345555677888888765443333333333334455555533 2356777776642 2566666
Q ss_pred EeCCCC-ccC--cCCCHHHHHHHHcC
Q 014594 224 LTSPNN-PDG--SIINDEDLLKILEM 246 (422)
Q Consensus 224 l~~p~N-PtG--~~~~~e~l~~i~~~ 246 (422)
-+--.. +.+ .-.+.+++.+..+.
T Consensus 80 nnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 80 NNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp ECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred ECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 442111 112 23467777776654
No 348
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=29.07 E-value=2.7e+02 Score=23.83 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=52.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----H-cCCEEEEecCCCCCCCCHHHHHHHhhc-CCCe
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----V-NGAAVVKVPRKSDFSLNVELIADAVER-EKPK 220 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~-~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~ 220 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-.......+ . .+..+..+..+- -|.+.+++.+++ .+..
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL---GTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT---TSHHHHHHHHHHCCCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC---CCHHHHHHHHHhcCCCC
Confidence 456666655544455566688889888776544433222221 1 145666665432 356777776654 3567
Q ss_pred EEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.++-+.-....+ .-.+.+++.+..+.
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~v 115 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEV 115 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 766542222212 23466777766654
No 349
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=29.01 E-value=2.7e+02 Score=23.66 Aligned_cols=99 Identities=11% Similarity=-0.038 Sum_probs=50.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+-. .-|.+.+++.+++ .
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL-TCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT-TCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc-cCCHHHHHHHHHHHHHhCC
Confidence 356666665554455666688889888776544433322221 12223333332211 1355665555432 3
Q ss_pred CCeEEEEeCCC-CccC--cCCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPN-NPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~-NPtG--~~~~~e~l~~i~~~ 246 (422)
+..+++-+.-. .+.+ .-.+.+++.+..+.
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhh
Confidence 56777644221 2222 23567777777664
No 350
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=28.82 E-value=2.4e+02 Score=24.77 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=50.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCC---EEEEcCCCchhHHHHHHH-----cCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGD---KIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd---~Vl~~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. .|.++..+..|-. |.+.+++.+++
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~ 110 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT---QAEKIKPFIENLP 110 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT---CGGGHHHHHHTSC
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC---CHHHHHHHHHHHH
Confidence 4566666555444455556766664 776655444333332221 2667777765422 44555554432
Q ss_pred ---CCCeEEEEeCC-CCccCc--CCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p-~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+-- ..+.+. ..+.+++.+..+.
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 25666664422 122222 3477888887664
No 351
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=28.57 E-value=2.5e+02 Score=23.22 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=44.2
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+|++..++.-+..++- .|.+.|..|++.+..........+..|..++.-+ ..|.+.++++-- .+.++++++.+
T Consensus 2 ~iiIiG~G~~G~~la~-~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd-----~~~~~~l~~a~i-~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYLAR-SMLSRKYGVVIINKDRELCEEFAKKLKATIIHGD-----GSHKEILRDAEV-SKNDVVVILTP 74 (218)
T ss_dssp CEEEECCHHHHHHHHH-HHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESC-----TTSHHHHHHHTC-CTTCEEEECCS
T ss_pred EEEEECCCHHHHHHHH-HHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcC-----CCCHHHHHhcCc-ccCCEEEEecC
Confidence 3566666665655544 4666676666666555545544555677665432 346777777632 46788887755
Q ss_pred C
Q 014594 228 N 228 (422)
Q Consensus 228 ~ 228 (422)
+
T Consensus 75 ~ 75 (218)
T 3l4b_C 75 R 75 (218)
T ss_dssp C
T ss_pred C
Confidence 4
No 352
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=28.41 E-value=3e+02 Score=24.08 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=52.1
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.+...+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..| --|.+.+++.+++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD---VTDEDGIQAMVAQIESE 108 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECC---TTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEec---CCCHHHHHHHHHHHHHH
Confidence 3344577776665555566667888888877654333222222 12235455555432 2356666665542
Q ss_pred -CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--..+.+. -.+.+++.+..+.
T Consensus 109 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 141 (291)
T 3cxt_A 109 VGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDI 141 (291)
T ss_dssp TCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred cCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 35676664422222221 2466777776654
No 353
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=27.90 E-value=1.7e+02 Score=27.12 Aligned_cols=79 Identities=16% Similarity=0.093 Sum_probs=47.4
Q ss_pred cCCCCEEEEcCCCchh-------HH---HHHHHcCCEEEEecCC-C--CC--CCC---HHHHHHHhhcCCCeEEEEeCCC
Q 014594 167 LDPGDKIVDCPPTFTM-------YE---FDAAVNGAAVVKVPRK-S--DF--SLN---VELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-------~~---~~~~~~g~~~~~v~~~-~--~~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+++||+|-+.+|+.+. +. ...+..|.+++.-+.- . ++ +-| .++|.+++..+.+++|+...--
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 5789999999998642 11 1234489999887721 1 11 122 4666677776788999876544
Q ss_pred CccCcCCCHHHHHHHHc
Q 014594 229 NPDGSIINDEDLLKILE 245 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~ 245 (422)
.=+-.+++.=+...|.+
T Consensus 120 yga~rlLp~LD~~~i~~ 136 (371)
T 3tla_A 120 DNSNSLLPFLDYDAIIA 136 (371)
T ss_dssp SCGGGGGGGSCHHHHHH
T ss_pred ccHHHHHhhcChhhHHh
Confidence 33445554433444443
No 354
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=27.74 E-value=2.7e+02 Score=23.28 Aligned_cols=97 Identities=15% Similarity=0.059 Sum_probs=50.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...-..+.+.|.+.|.+|++..-.-......... .+.++..+..+ --|.+.+++.+++ .
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMN---LLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECC---TTCHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEcc---CCCHHHHHHHHHHHHHhcC
Confidence 3466665555444555666778888877654433222222111 35566655533 2356777666542 2
Q ss_pred CCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+...++-+....+.+ .-.+.+++.+..+.
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKV 115 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhh
Confidence 577777553222222 12456666666553
No 355
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.68 E-value=1.8e+02 Score=25.10 Aligned_cols=75 Identities=8% Similarity=-0.057 Sum_probs=38.6
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH------cCCEEEEecCCCCCCCCHHHHHHHhhc-----
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER----- 216 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (422)
.+++|.|+...=..+.+.|.+.|.+|++..-.-.......+. .+.++..+..| --|.+.+++.+++
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD---VTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC---TTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecc---cCCHHHHHHHHHHHHHHc
Confidence 455655544444555666778888877654333222222221 13345555532 2356666665542
Q ss_pred CCCeEEEEe
Q 014594 217 EKPKCIFLT 225 (422)
Q Consensus 217 ~~~~~i~l~ 225 (422)
.+..+++-+
T Consensus 85 g~id~lv~~ 93 (278)
T 1spx_A 85 GKLDILVNN 93 (278)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 256766644
No 356
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=27.29 E-value=2.1e+02 Score=26.00 Aligned_cols=79 Identities=22% Similarity=0.188 Sum_probs=47.4
Q ss_pred cCCCCEEEEcCCCchh-------HH---HHHHHcCCEEEEecC--C-CCC--CCC---HHHHHHHhhcCCCeEEEEeCCC
Q 014594 167 LDPGDKIVDCPPTFTM-------YE---FDAAVNGAAVVKVPR--K-SDF--SLN---VELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-------~~---~~~~~~g~~~~~v~~--~-~~~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+++||+|-+.+|+... +. ...+..|.+++.-+. . .++ +-| .++|.+++..+.+|+|+...--
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 6789999999887642 11 123448999988772 1 111 222 4666677776788999876444
Q ss_pred CccCcCCCHHHHHHHHc
Q 014594 229 NPDGSIINDEDLLKILE 245 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~ 245 (422)
.=+-.+++.=+...|.+
T Consensus 89 ~g~~rlL~~lD~~~i~~ 105 (331)
T 4e5s_A 89 YNSNGLLKYLDYDLIRE 105 (331)
T ss_dssp SCGGGGGGGCCHHHHHT
T ss_pred ccHHHHHhhcChhHHHh
Confidence 33445544433444443
No 357
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=27.28 E-value=2.4e+02 Score=25.83 Aligned_cols=86 Identities=12% Similarity=0.159 Sum_probs=52.2
Q ss_pred CEEEeCCH---HHHHHHHHHHhcCCC-CEEEEcCCCchh-HH-HHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCe
Q 014594 148 HILVGCGA---DELIDLIMRCVLDPG-DKIVDCPPTFTM-YE-FDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPK 220 (422)
Q Consensus 148 ~i~~~~G~---~~al~~~~~~l~~~g-d~Vl~~~p~y~~-~~-~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~ 220 (422)
-|+++.|+ .++++++-.+- +-| |.|++..|.|.. .. ... .+.+++..+ ..+.-
T Consensus 94 pViaGvg~~st~eai~la~~A~-~~Gadavlv~~P~y~~~~s~~~l-------------------~~~f~~IA~aa~~lP 153 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQ-KVGAKGLMVIPRVLSRGSVIAAQ-------------------KAHFKAILSAAPEIP 153 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHH-HHTCSEEEECCCCSSSTTCHHHH-------------------HHHHHHHHHHSTTSC
T ss_pred cEEEecCCCCHHHHHHHHHHHH-hcCCCEEEECCCccCCCCCHHHH-------------------HHHHHHHHhhCCCCc
Confidence 47777664 56666555432 224 889999998843 11 000 112222222 22345
Q ss_pred EEEEeCCCCccCcCCCHHHHHHH-HcC-CCeEEEccC
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKI-LEM-PILVVLDEA 255 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i-~~~-~~~li~Dea 255 (422)
+++-+.| .||..++.+.+.+| ++. ++.=|=|..
T Consensus 154 iilYn~P--~tg~~l~~e~~~~L~a~~pnIvGiKdss 188 (344)
T 2hmc_A 154 AVIYNSP--YYGFATRADLFFALRAEHKNLVGFKEFG 188 (344)
T ss_dssp EEEEEBG--GGTBCCCHHHHHHHHHHCTTEEEEEECS
T ss_pred EEEEecC--ccCCCcCHHHHHHHHhcCCCEEEEEcCC
Confidence 6666788 79999999999999 877 666666654
No 358
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=27.24 E-value=90 Score=24.83 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH-HHHH----HHcC-CC-eEEEccCCcc
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLK----ILEM-PI-LVVLDEAYTE 258 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e-~l~~----i~~~-~~-~li~Deay~~ 258 (422)
...+.+.|.+.+++.++..|++--|-|..|..-..- +.+. +.+. ++ +.++||.|+.
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 456789999999888999999999988888775322 1122 2222 55 4668999883
No 359
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.17 E-value=2.1e+02 Score=24.34 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=49.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCc---hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTF---TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p~y---~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|..|++.. ..- .......+..+.++..+..+ --|.+.+++.+++ .
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGN---VGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECC---TTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecC---CCCHHHHHHHHHHHHHhcC
Confidence 3556655554444555666788887776532 222 12222333456566555533 2356666655532 2
Q ss_pred CCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 218 KPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+..+++-+.-....+ .-.+.+++.+..+.
T Consensus 91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp CEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 566665442222222 23567777776654
No 360
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=26.80 E-value=3e+02 Score=23.49 Aligned_cols=99 Identities=8% Similarity=0.049 Sum_probs=53.2
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
+...+++|.|+...=..+.+.|.+.|.+|++. ...-...... .+..|.++..+..| --|.+.+++.+++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKAD---LTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECC---TTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcC---CCCHHHHHHHHHHHHHH
Confidence 33456776666555556666788889887765 4333322222 22346566655543 2356666665542
Q ss_pred -CCCeEEEEeCCCC-ccCc--CCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNN-PDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~N-PtG~--~~~~e~l~~i~~~ 246 (422)
.+...++-+.-.. +.+. -.+.+++.+..+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 2556665442111 2222 4577777777664
No 361
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=26.63 E-value=2.4e+02 Score=23.25 Aligned_cols=106 Identities=7% Similarity=0.054 Sum_probs=58.0
Q ss_pred CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC-
Q 014594 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN- 206 (422)
Q Consensus 128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d- 206 (422)
..+..++-+.+++.++. +--+...+-.+++..+-. + +.|..|++....-..+.. +..+..++.++.. +.|
T Consensus 13 y~~l~~~~~~i~~e~~~--~i~i~~~~l~~~v~~a~~-~-~~~~dVIISRGgta~~lr--~~~~iPVV~I~~s---~~Di 83 (196)
T 2q5c_A 13 NENLLNLFPKLALEKNF--IPITKTASLTRASKIAFG-L-QDEVDAIISRGATSDYIK--KSVSIPSISIKVT---RFDT 83 (196)
T ss_dssp CHHHHHHHHHHHHHHTC--EEEEEECCHHHHHHHHHH-H-TTTCSEEEEEHHHHHHHH--TTCSSCEEEECCC---HHHH
T ss_pred cHHHHHHHHHHHhhhCC--ceEEEECCHHHHHHHHHH-h-cCCCeEEEECChHHHHHH--HhCCCCEEEEcCC---HhHH
Confidence 33333444444444543 212455667778877766 4 667557777643332222 3367888988842 233
Q ss_pred HHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCC
Q 014594 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247 (422)
Q Consensus 207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~ 247 (422)
+..|.++-+ ...|.-++..++-+ ...+.+.++...+
T Consensus 84 l~al~~a~~-~~~kIavvg~~~~~----~~~~~~~~ll~~~ 119 (196)
T 2q5c_A 84 MRAVYNAKR-FGNELALIAYKHSI----VDKHEIEAMLGVK 119 (196)
T ss_dssp HHHHHHHGG-GCSEEEEEEESSCS----SCHHHHHHHHTCE
T ss_pred HHHHHHHHh-hCCcEEEEeCcchh----hHHHHHHHHhCCc
Confidence 233333333 44566666666543 3457788887763
No 362
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=26.54 E-value=2.9e+02 Score=23.29 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=53.4
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..-.-...... .+..+.++..+..| --|.+.+++.+++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD---VTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC---TTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEec---CCCHHHHHHHHHHHHHH
Confidence 3344677776665555566666788888877654433222221 22245566655543 2356676666542
Q ss_pred -CCCeEEEEeCCCCc-cCc--CCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNP-DGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NP-tG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+....+ .+. -.+.+++.+..+.
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDI 121 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHh
Confidence 36777775532221 222 2456666665543
No 363
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.32 E-value=2.9e+02 Score=23.18 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=51.2
Q ss_pred EEeCCHHHHHHHHHHHhcCC--CCEE--EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH----HHHHHHhhcCCCeE
Q 014594 150 LVGCGADELIDLIMRCVLDP--GDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV----ELIADAVEREKPKC 221 (422)
Q Consensus 150 ~~~~G~~~al~~~~~~l~~~--gd~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~----~~l~~~i~~~~~~~ 221 (422)
++.+|+.+.+..++..+.+. +-+| +++++.-......|+..|+.+..++.. ++. +. +++.+.+.+.++.+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~-~~~-~~~~~~~~~~~~l~~~~~Dl 85 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK-DYP-SKAAFESEILRELKGRQIDW 85 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG-GSS-SHHHHHHHHHHHHHHTTCCE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc-ccc-chhhhHHHHHHHHHhcCCCE
Confidence 44455555666666766554 2222 334432233445678899998876531 111 22 24555566678999
Q ss_pred EEEeCCCCccCcCCCHHHHHHH
Q 014594 222 IFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i 243 (422)
+++.. .|.+++.+-+...
T Consensus 86 iv~a~----y~~il~~~~l~~~ 103 (212)
T 3av3_A 86 IALAG----YMRLIGPTLLSAY 103 (212)
T ss_dssp EEESS----CCSCCCHHHHHHT
T ss_pred EEEch----hhhhCCHHHHhhh
Confidence 88765 5788888777554
No 364
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=26.20 E-value=2.8e+02 Score=24.86 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=50.4
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-----CchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPP-----TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-----~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
.+++|.|+...=..+.+.|.+.|.+|++..- .-.... ......|.++..+..|- -|.+.+++.+++
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv---td~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV---QSQVSVDRAIDQIIG 83 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec---CCHHHHHHHHHHHHH
Confidence 4566555554445566678888988875321 111112 22233466666666432 356666666542
Q ss_pred --CCCeEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....|. ..+.+++.++.+.
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 117 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDI 117 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 36776664422222222 2466777666553
No 365
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=26.12 E-value=44 Score=26.58 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=21.8
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++++.||+.++++++.|++-
T Consensus 31 aTpSk~eIrekLAkmy~~~~d~VvV~ 56 (149)
T 2xzm_P 31 PTASKEKIREELAKQLKVDARNVVVY 56 (149)
T ss_dssp CSCCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999998888764
No 366
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=25.79 E-value=2.9e+02 Score=23.09 Aligned_cols=97 Identities=11% Similarity=0.033 Sum_probs=49.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcC--CEEEEecCCCCCCCCHHHHHHHhhc-----CCC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+... .++..+..+ --|.+.+++.+++ .+.
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD---SSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECC---TTCHHHHHHHHHHHHHHHSSC
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECC---CCCHHHHHHHHHHHHHHhCCC
Confidence 346665555444455566677888787765433322222222221 234444432 2356666665542 357
Q ss_pred eEEEEeCCCCccCc--CCCHHHHHHHHcC
Q 014594 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~e~l~~i~~~ 246 (422)
.+++-+....+.+. -.+.+++.+..+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAV 112 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 77775533222222 3466777766554
No 367
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=25.67 E-value=1.5e+02 Score=25.59 Aligned_cols=93 Identities=11% Similarity=0.098 Sum_probs=52.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEe
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLT 225 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~ 225 (422)
..+++|.|+...=..+.+.|.+.|-+|++..-.-... ....+.++..+..| --|.+++++.+++ .+...++ +
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~D---v~~~~~v~~~~~~~g~iDiLV-N 84 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELD---ITDSQRLQRLFEALPRLDVLV-N 84 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECC---TTCHHHHHHHHHHCSCCSEEE-E
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEec---CCCHHHHHHHHHhcCCCCEEE-E
Confidence 3456666555544555667888898877654322111 11234455555543 2356777777754 3556554 4
Q ss_pred CC-CCccCcCCCHHHHHHHHcC
Q 014594 226 SP-NNPDGSIINDEDLLKILEM 246 (422)
Q Consensus 226 ~p-~NPtG~~~~~e~l~~i~~~ 246 (422)
|. -+.....++.+++.++.+.
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 43 2333445677888887775
No 368
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=25.64 E-value=3e+02 Score=23.14 Aligned_cols=87 Identities=13% Similarity=0.069 Sum_probs=50.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCC---CEE-EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC----HHHHHHHhhcCCCe
Q 014594 149 ILVGCGADELIDLIMRCVLDPG---DKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN----VELIADAVEREKPK 220 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~g---d~V-l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d----~~~l~~~i~~~~~~ 220 (422)
+++.+|..+.+..++..+.+.+ +.+ +++++.-......++..|+.+..++.. ++. + -+++.+.+.+.++.
T Consensus 5 ~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~-~~~-~r~~~~~~~~~~l~~~~~D 82 (216)
T 2ywr_A 5 GVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK-EFP-SKKEFEERMALELKKKGVE 82 (216)
T ss_dssp EEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG-GSS-SHHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc-ccc-chhhhhHHHHHHHHhcCCC
Confidence 3454555556666677666554 222 334433233455677889998876531 111 2 13455556667899
Q ss_pred EEEEeCCCCccCcCCCHHHHH
Q 014594 221 CIFLTSPNNPDGSIINDEDLL 241 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~ 241 (422)
++++.. .|.+++.+-+.
T Consensus 83 liv~a~----y~~il~~~~l~ 99 (216)
T 2ywr_A 83 LVVLAG----FMRILSHNFLK 99 (216)
T ss_dssp EEEESS----CCSCCCHHHHT
T ss_pred EEEEeC----chhhCCHHHHh
Confidence 988765 56788876664
No 369
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.47 E-value=3.2e+02 Score=23.55 Aligned_cols=97 Identities=8% Similarity=0.003 Sum_probs=49.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH---HcCC---EEEEecCCCCCCCCHHHHHHHhhc----
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGA---AVVKVPRKSDFSLNVELIADAVER---- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-........ ..|. ++..+..| --|.+.+++.+++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD---VTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECC---TTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEec---CCCHHHHHHHHHHHHHh
Confidence 346666555544455566678888887765443332222221 1233 45555533 2356666665542
Q ss_pred -CCCeEEEEeCCCCccC------cCCCHHHHHHHHcC
Q 014594 217 -EKPKCIFLTSPNNPDG------SIINDEDLLKILEM 246 (422)
Q Consensus 217 -~~~~~i~l~~p~NPtG------~~~~~e~l~~i~~~ 246 (422)
.+..+++-+--....+ .-.+.+++.+..+.
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHH
Confidence 3567776542222122 23466777776654
No 370
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=25.46 E-value=3.4e+02 Score=27.12 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=38.3
Q ss_pred CCCCEEEEcCCCchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594 168 DPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (422)
Q Consensus 168 ~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~ 239 (422)
++||.|.+.-|.-..+ ...+...|+..+.+.. .+..+.+...+...++++|+........|...+..+
T Consensus 137 ~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~----~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~ 207 (663)
T 1ry2_A 137 RKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFA----GFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKR 207 (663)
T ss_dssp CTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCT----TSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCC----CCCHHHHHHHHHhcCCeEEEEccccccCCcccchHH
Confidence 4677777665544322 2233346766666542 345677777776667777776554444455555433
No 371
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=25.46 E-value=92 Score=27.52 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=48.1
Q ss_pred HcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC-CCCCCC-HHHHHHHhhc
Q 014594 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK-SDFSLN-VELIADAVER 216 (422)
Q Consensus 141 ~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~-~~~~~d-~~~l~~~i~~ 216 (422)
.+|+.+ ++...+..+++...+.....+|.+|+++.+.-. ......+..|+++..++.= .....+ .+.+.+.+.+
T Consensus 130 ~~G~~~--~~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~ 207 (286)
T 1jr2_A 130 KIGLDT--EGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQ 207 (286)
T ss_dssp HTTCCC--SCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHH
T ss_pred HcCCCc--CCCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHh
Confidence 457654 334455566655555433345778888766542 4455566688888877721 110112 3355555543
Q ss_pred -CCCeEEEEeCCC
Q 014594 217 -EKPKCIFLTSPN 228 (422)
Q Consensus 217 -~~~~~i~l~~p~ 228 (422)
.+..+|++.+|+
T Consensus 208 ~~~~d~v~ftS~~ 220 (286)
T 1jr2_A 208 QGVPASITFFSPS 220 (286)
T ss_dssp HCSCSEEEESSHH
T ss_pred CCCCCEEEEEChH
Confidence 466778876664
No 372
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.32 E-value=3.2e+02 Score=23.40 Aligned_cols=100 Identities=9% Similarity=0.077 Sum_probs=55.0
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-Cchh---HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (422)
.+...+++|.|+...=..+.+.|.+.|.+|++..- .-.. .....+..|.++..+..+- -|.+.+++.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA---ASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHH
Confidence 34446677666655555666678888887766443 2222 2223334566776666432 355666655532
Q ss_pred --CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+...++-+.-....+ .-.+.+++.+..+.
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHh
Confidence 3677776553222222 23567777777654
No 373
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=24.97 E-value=2.5e+02 Score=23.91 Aligned_cols=95 Identities=12% Similarity=0.062 Sum_probs=49.7
Q ss_pred EEEeCCHHHHHHHHHHHhcCC--CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeE
Q 014594 149 ILVGCGADELIDLIMRCVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (422)
+++|.|+...=..+.+.|.+. |..|++....-.......+..|.++..+..|- -|.+.+++.+++ .+...
T Consensus 5 ~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDI---TEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp EEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCT---TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCC---CCHHHHHHHHHHHHHhcCCccE
Confidence 455544443334444556554 45666554444444444444566666666432 356666665542 36777
Q ss_pred EEEeCC-CCccCc--CCCHHHHHHHHcC
Q 014594 222 IFLTSP-NNPDGS--IINDEDLLKILEM 246 (422)
Q Consensus 222 i~l~~p-~NPtG~--~~~~e~l~~i~~~ 246 (422)
++-+-- ..+.+. -.+.+++.+..+.
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHH
Confidence 765522 223232 3477888777664
No 374
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=24.97 E-value=3.2e+02 Score=23.26 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=51.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... +..|.++..+..+- -|.+.+++.+.+ .+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV---TSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 45667666555555666668888888776543322222222 22355666665432 256666655532 35
Q ss_pred CeEEEEeCCCC-ccCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNN-PDGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~N-PtG~--~~~~e~l~~i~~~ 246 (422)
..+++-+.-.. +.+. -.+.+++.+..+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 115 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTI 115 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHH
Confidence 67776442221 2221 3467777776654
No 375
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=24.96 E-value=52 Score=30.29 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=47.0
Q ss_pred CEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 148 HILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
.|+-++++..++.++..+- +.-.-.|+++.-.-..-....+.+|++++.++...+...+.....+... ..+...++..
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 167 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLE-NTPNAHMLQQ 167 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH-HSTTEECCCT
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHh-hccCceeccc
Confidence 5777788888887776643 2222345565544455566677899999998742221111222222222 3456666655
Q ss_pred CCCcc
Q 014594 227 PNNPD 231 (422)
Q Consensus 227 p~NPt 231 (422)
..||.
T Consensus 168 ~~np~ 172 (344)
T 3vc3_A 168 FSNPA 172 (344)
T ss_dssp TTCHH
T ss_pred cccch
Confidence 56663
No 376
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.88 E-value=2.7e+02 Score=25.03 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=50.1
Q ss_pred CEEEeCC---HHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHH----HHhhcCCC
Q 014594 148 HILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA----DAVEREKP 219 (422)
Q Consensus 148 ~i~~~~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~----~~i~~~~~ 219 (422)
.|+++.| ..++++.+-.+---.+ |.|++..|.|... +.+.+. +..+.-+.
T Consensus 78 pViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~----------------------s~~~l~~~f~~va~a~~l 135 (311)
T 3h5d_A 78 PLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKP----------------------SQEGMYQHFKAIADASDL 135 (311)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCC----------------------CHHHHHHHHHHHHHSCSS
T ss_pred cEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCC----------------------CHHHHHHHHHHHHHhCCC
Confidence 5776665 4555555444322234 8899988888421 112222 22222234
Q ss_pred eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 220 KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
-+++-+.|.. ||..++.+.+.+|++. ++.=|=|..
T Consensus 136 PiilYn~P~~-tg~~l~~~~~~~La~~pnIvgiKdss 171 (311)
T 3h5d_A 136 PIIIYNIPGR-VVVELTPETMLRLADHPNIIGVKECT 171 (311)
T ss_dssp CEEEEECHHH-HSSCCCHHHHHHHHTSTTEEEEEECS
T ss_pred CEEEEecccc-cCCCCCHHHHHHHhcCCCEEEEEeCC
Confidence 4555455543 8999999999999987 666666654
No 377
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.75 E-value=3.4e+02 Score=23.81 Aligned_cols=100 Identities=9% Similarity=0.012 Sum_probs=52.4
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCC---EEEEecCCCCCCCCHHHHHHHhhc-
Q 014594 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGA---AVVKVPRKSDFSLNVELIADAVER- 216 (422)
Q Consensus 144 ~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~- 216 (422)
.+...+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|. ++..+..| --|.+.+++.+++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD---VTEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC---TTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecC---CCCHHHHHHHHHHH
Confidence 33345666665554445566668888988776544332222221 22344 55555533 2356666665542
Q ss_pred ----CCCeEEEEeCCCCccCc----CCCHHHHHHHHcC
Q 014594 217 ----EKPKCIFLTSPNNPDGS----IINDEDLLKILEM 246 (422)
Q Consensus 217 ----~~~~~i~l~~p~NPtG~----~~~~e~l~~i~~~ 246 (422)
.+..+++-+-.....+. -.+.+++.+..+.
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~v 138 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 138 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhH
Confidence 35677765422222222 3467777777654
No 378
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.75 E-value=1.9e+02 Score=26.14 Aligned_cols=90 Identities=9% Similarity=0.003 Sum_probs=45.9
Q ss_pred EEeCCHHHHHHHHHHHhc-CCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594 150 LVGCGADELIDLIMRCVL-DPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (422)
Q Consensus 150 ~~~~G~~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (422)
+++.|...-.. .+.++. .++ ..+.+.++.-......++.+|+.-.. -|++++ +..+++.+|+++.|
T Consensus 28 iIG~G~ig~~~-~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--------~d~~el---l~~~~iDaV~I~tP 95 (350)
T 4had_A 28 IISTAKIGRDN-VVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF--------GSYEEM---LASDVIDAVYIPLP 95 (350)
T ss_dssp EESCCHHHHHT-HHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE--------SSHHHH---HHCSSCSEEEECSC
T ss_pred EEcChHHHHHH-HHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee--------CCHHHH---hcCCCCCEEEEeCC
Confidence 56666543221 222222 234 33446677666666666666653211 134443 43456778888777
Q ss_pred CCccCcCCCHHHHHHHHcCCCeEEEccCC
Q 014594 228 NNPDGSIINDEDLLKILEMPILVVLDEAY 256 (422)
Q Consensus 228 ~NPtG~~~~~e~l~~i~~~~~~li~Deay 256 (422)
++ .-.+-..+.++.|..|++.-.-
T Consensus 96 ~~-----~H~~~~~~al~aGkhVl~EKPl 119 (350)
T 4had_A 96 TS-----QHIEWSIKAADAGKHVVCEKPL 119 (350)
T ss_dssp GG-----GHHHHHHHHHHTTCEEEECSCC
T ss_pred Cc-----hhHHHHHHHHhcCCEEEEeCCc
Confidence 64 2233444444556666666543
No 379
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=24.34 E-value=41 Score=26.34 Aligned_cols=26 Identities=27% Similarity=0.216 Sum_probs=21.9
Q ss_pred CCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594 127 PDPESRRLRAALAKDSGLESDHILVG 152 (422)
Q Consensus 127 ~~~~~~~lr~~la~~~~~~~~~i~~~ 152 (422)
+.+.-.++++.||+.|+++++.|++-
T Consensus 33 aTpsr~eIrekLAk~y~~~~d~VvV~ 58 (135)
T 3u5c_Y 33 ANVSKDELREKLAEVYKAEKDAVSVF 58 (135)
T ss_dssp CCCCHHHHHHHHHTTTTSCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999998888764
No 380
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.25 E-value=3.5e+02 Score=24.05 Aligned_cols=84 Identities=12% Similarity=0.121 Sum_probs=50.1
Q ss_pred EEEeC---CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHH----HhhcCCCeE
Q 014594 149 ILVGC---GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD----AVEREKPKC 221 (422)
Q Consensus 149 i~~~~---G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~i~~~~~~~ 221 (422)
|+++. +..++++.+-.+---.-|.|++..|.|... +.+.+.+ ..+.-+..+
T Consensus 76 viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~----------------------~~~~l~~~f~~va~a~~lPi 133 (300)
T 3eb2_A 76 VVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPL----------------------KDAQIESYFRAIADAVEIPV 133 (300)
T ss_dssp BEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCC----------------------CHHHHHHHHHHHHHHCSSCE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----------------------CHHHHHHHHHHHHHHCCCCE
Confidence 55444 466777666553322238888888888421 1122222 222123456
Q ss_pred EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea 255 (422)
++-+.|.. ||..++.+.+.+|++. ++.=|=|..
T Consensus 134 ilYn~P~~-tg~~l~~~~~~~La~~pnIvgiKdss 167 (300)
T 3eb2_A 134 VIYTNPQF-QRSDLTLDVIARLAEHPRIRYIKDAS 167 (300)
T ss_dssp EEEECTTT-CSSCCCHHHHHHHHTSTTEEEEEECS
T ss_pred EEEECccc-cCCCCCHHHHHHHHcCCCEEEEEcCC
Confidence 66677764 8999999999999877 666566653
No 381
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=24.18 E-value=1.3e+02 Score=21.87 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH-----HHHHHHcCCC-eEEEccCCc
Q 014594 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-----DLLKILEMPI-LVVLDEAYT 257 (422)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e-----~l~~i~~~~~-~li~Deay~ 257 (422)
...+.+.|.+.+++.++..|++--|-|..|..-+.. ...+|.+.++ +..+||-++
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 345678899988878899999889998888876521 1222222254 456888765
No 382
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.47 E-value=1.4e+02 Score=26.68 Aligned_cols=91 Identities=9% Similarity=-0.011 Sum_probs=52.7
Q ss_pred EEEeCCHHHHHHHHHHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC-HHHHHHHhhcCCCeEEEE
Q 014594 149 ILVGCGADELIDLIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFL 224 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l 224 (422)
+++.+|.-..+..++...... .+.+++.+. ++.....++.+|+.+..+|........ -+++.+.+++.++.++++
T Consensus 94 ~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn-~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivl 172 (286)
T 3n0v_A 94 VIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSN-HPDLEPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVIL 172 (286)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSCCEEEEEEES-SSTTHHHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeC-cHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 355666666777777655332 233332221 122234578899999888742210111 134556666678999998
Q ss_pred eCCCCccCcCCCHHHHHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~ 244 (422)
.. .+.+++.+-+....
T Consensus 173 a~----y~~il~~~~l~~~~ 188 (286)
T 3n0v_A 173 AR----YMQVLSPELCRRLD 188 (286)
T ss_dssp SS----CCSCCCHHHHHHTT
T ss_pred cc----cccccCHHHHhhhc
Confidence 65 57788877776543
No 383
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=23.42 E-value=3.8e+02 Score=23.61 Aligned_cols=82 Identities=21% Similarity=0.309 Sum_probs=47.6
Q ss_pred CEEEeCCH---HHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh----hcCCC
Q 014594 148 HILVGCGA---DELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV----EREKP 219 (422)
Q Consensus 148 ~i~~~~G~---~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i----~~~~~ 219 (422)
.|+++.|+ .++++.+-. ..+-| |.|++..|.|... +.+.+.+.+ +..+.
T Consensus 72 pviaGvg~~~t~~ai~la~~-a~~~Gadavlv~~P~y~~~----------------------s~~~l~~~f~~ia~a~~l 128 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQR-FNDSGIVGCLTVTPYYNRP----------------------SQEGLYQHFKAIAEHTDL 128 (292)
T ss_dssp CEEEECCCSSHHHHHHHHHH-TTTSSCSEEEEECCCSSCC----------------------CHHHHHHHHHHHHTTCSS
T ss_pred cEEEecCCccHHHHHHHHHH-HHhcCCCEEEECCCCCCCC----------------------CHHHHHHHHHHHHHhcCC
Confidence 47777665 555555544 33445 8899999988411 122222222 11233
Q ss_pred eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594 220 KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (422)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D 253 (422)
.+++-+.|. .||..++.+.+.+|++. ++.=|=|
T Consensus 129 PiilYn~P~-~tg~~l~~~~~~~La~~pnivgiK~ 162 (292)
T 2ojp_A 129 PQILYNVPS-RTGCDLLPETVGRLAKVKNIIGIXE 162 (292)
T ss_dssp CEEEECCHH-HHSCCCCHHHHHHHHTSTTEEEC-C
T ss_pred CEEEEeCcc-hhccCCCHHHHHHHHcCCCEEEEeC
Confidence 455545555 48999999999999876 5444444
No 384
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=23.23 E-value=2.3e+02 Score=25.47 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=46.2
Q ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEec-CCCCCCCCHHHHHH---HhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIAD---AVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (422)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~---~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~ 245 (422)
+..+++..|.| ..+++.+|.+.+.+. ...+..+.+.+|.+ .+++.+.++|+...-.+| +..+.|++
T Consensus 190 ~~~~v~~H~af---~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~~ia~ 259 (307)
T 3ujp_A 190 QRFLVSCEGAF---SYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQKQVAQ 259 (307)
T ss_dssp GCEEEEEESTT---HHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHHHTTT
T ss_pred CCEEEEECchH---HHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHHHHHH
Confidence 35566665555 556778999987664 34445666665555 455688999998754443 56777877
Q ss_pred C-CCeE
Q 014594 246 M-PILV 250 (422)
Q Consensus 246 ~-~~~l 250 (422)
. |+.+
T Consensus 260 e~g~~v 265 (307)
T 3ujp_A 260 ATGARF 265 (307)
T ss_dssp TTCCEE
T ss_pred HhCCce
Confidence 6 6654
No 385
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=22.80 E-value=3.4e+02 Score=22.73 Aligned_cols=88 Identities=15% Similarity=0.095 Sum_probs=50.9
Q ss_pred EEeCCHHHHHHHHHHHhcCC--CCEE--EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH----HHHHHHhhcCCCeE
Q 014594 150 LVGCGADELIDLIMRCVLDP--GDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV----ELIADAVEREKPKC 221 (422)
Q Consensus 150 ~~~~G~~~al~~~~~~l~~~--gd~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~----~~l~~~i~~~~~~~ 221 (422)
++.+|.-..+..++..+.+. +-+| ++++|.-..-...|+..|+.+..++... +. +- +++.+.+.+.++.+
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~-~~-~r~~~~~~~~~~l~~~~~Dl 82 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKL-YK-NRVEFDSAIDLVLEEFSIDI 82 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG-SS-SHHHHHHHHHHHHHHTTCCE
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccc-cC-chhhhhHHHHHHHHhcCCCE
Confidence 44555555677777655432 2232 3344432233456778999988765311 11 21 34556666678999
Q ss_pred EEEeCCCCccCcCCCHHHHHHH
Q 014594 222 IFLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 222 i~l~~p~NPtG~~~~~e~l~~i 243 (422)
|++.. .|.+++.+-+...
T Consensus 83 iv~a~----y~~il~~~~l~~~ 100 (209)
T 1meo_A 83 VCLAG----FMRILSGPFVQKW 100 (209)
T ss_dssp EEEES----CCSCCCHHHHHHT
T ss_pred EEEcc----hhhhCCHHHHhhh
Confidence 98875 4678887766543
No 386
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=22.73 E-value=3.4e+02 Score=22.73 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=50.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC-chhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...=..+.+.|.+.|.+|++..-. -.... ......+.++..+..| --|.+.+++.+++ .
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAAD---LATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECC---TTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECC---CCCHHHHHHHHHHHHHHcC
Confidence 356666655544455666677888777654322 21111 1222346666666643 2356777666542 2
Q ss_pred CCeEEEEeCCC-CccCc--CCCHHHHHHHHc
Q 014594 218 KPKCIFLTSPN-NPDGS--IINDEDLLKILE 245 (422)
Q Consensus 218 ~~~~i~l~~p~-NPtG~--~~~~e~l~~i~~ 245 (422)
+..+++-+-.. .+.+. -.+.+++.+..+
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 67777755322 22222 245666666554
No 387
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=22.60 E-value=92 Score=28.06 Aligned_cols=76 Identities=13% Similarity=0.239 Sum_probs=44.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC----CCCCCCCHHHHHHHhhcCCCeEEE
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIF 223 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~ 223 (422)
+++.|++. ++..+ ..+ ++++|++..-.+-.+. ..+..|.+++..+. ..-..+.++++++... ..+.+.+
T Consensus 121 D~v~TSsn--a~~~v-~~~--~~~~iif~pD~~Lg~~-l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~-~~P~a~v 193 (300)
T 1wzu_A 121 DVTVTSAN--AVEVV-KKL--DSDVVIFGPDKNLAHY-VAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKK-LHPNAKL 193 (300)
T ss_dssp SEEECTTT--HHHHH-HTC--SCSEEEEESCHHHHHH-HHHHHCCEEEEC-----------CCHHHHHHHHH-HCTTCEE
T ss_pred CEEEchHH--HHHHH-HhC--CCCeEEEECChhHHHH-HHHHcCCeEEECCCCCcCCCcccCCHHHHHHHHH-HCCCCEE
Confidence 45555543 33333 334 5777766544443333 33445888887662 1123578999999887 4678888
Q ss_pred EeCCCCc
Q 014594 224 LTSPNNP 230 (422)
Q Consensus 224 l~~p~NP 230 (422)
+.||.-|
T Consensus 194 ~~HPEc~ 200 (300)
T 1wzu_A 194 MIHPECI 200 (300)
T ss_dssp EECTTSC
T ss_pred EECCCCC
Confidence 8999864
No 388
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=22.57 E-value=57 Score=28.69 Aligned_cols=60 Identities=8% Similarity=-0.053 Sum_probs=38.2
Q ss_pred CCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhc-CCCeEEEEeCCC
Q 014594 169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVER-EKPKCIFLTSPN 228 (422)
Q Consensus 169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~~i~l~~p~ 228 (422)
.|.+|++..|.-. .+....+..|++++.+|.- .....|.+.+.+.+.. .+...|+++++|
T Consensus 13 ~g~~IlvTRp~~~a~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHTTTCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 4678999988764 4555666789999998831 1112244556555432 356788877765
No 389
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=22.56 E-value=3.4e+02 Score=25.96 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=0.0
Q ss_pred EEEeCCHHH--------------HHHHHHHHh-cCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHH
Q 014594 149 ILVGCGADE--------------LIDLIMRCV-LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVEL 209 (422)
Q Consensus 149 i~~~~G~~~--------------al~~~~~~l-~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~ 209 (422)
|++|+|+|. ........+ +.++|.++...|.|+.+. ......|+.++..+ ..|++.
T Consensus 175 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~~G~~~v~~~-----~~~~~~ 249 (517)
T 3r44_A 175 IMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMP-----QFDATK 249 (517)
T ss_dssp EEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-----SCCHHH
T ss_pred EEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHhcCeEEEEeC-----CCCHHH
Q ss_pred HHHHhhcCCCeEEEEe
Q 014594 210 IADAVEREKPKCIFLT 225 (422)
Q Consensus 210 l~~~i~~~~~~~i~l~ 225 (422)
+.+.+.+.++..+...
T Consensus 250 ~~~~i~~~~~t~~~~~ 265 (517)
T 3r44_A 250 VWSLIVEERVCIGGAV 265 (517)
T ss_dssp HHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhCCeEEEeH
No 390
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=22.47 E-value=3.5e+02 Score=22.91 Aligned_cols=96 Identities=11% Similarity=-0.030 Sum_probs=48.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (422)
..+++|.|+...-..+.+.|.+.|.+|++..- .-..... ..+..|.++..+..| --|.+.+++.+++ .
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD---ISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC---TTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEec---CCCHHHHHHHHHHHHHHcC
Confidence 45666655544445566667788877766433 2222221 122246666666543 2356666666542 2
Q ss_pred CCeEEEEeCCCCccCc--CCCHHHHHHHHc
Q 014594 218 KPKCIFLTSPNNPDGS--IINDEDLLKILE 245 (422)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~e~l~~i~~ 245 (422)
+...++-+....+.+. ..+.+++.+..+
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 5566653322222221 245666666554
No 391
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=22.39 E-value=1.2e+02 Score=29.95 Aligned_cols=79 Identities=13% Similarity=0.166 Sum_probs=49.1
Q ss_pred EEEeCCHH----HHHHHHHH-----HhcCCCCEEEEcCCCchhH-------HHHHHHcCCEEEEec---CCCCCCCCHHH
Q 014594 149 ILVGCGAD----ELIDLIMR-----CVLDPGDKIVDCPPTFTMY-------EFDAAVNGAAVVKVP---RKSDFSLNVEL 209 (422)
Q Consensus 149 i~~~~G~~----~al~~~~~-----~l~~~gd~Vl~~~p~y~~~-------~~~~~~~g~~~~~v~---~~~~~~~d~~~ 209 (422)
|++++|++ .++..+.. ...+++|.|++.....++. .......|++++... ..-..+-|.++
T Consensus 309 vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~e 388 (562)
T 3bk2_A 309 LILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEE 388 (562)
T ss_dssp EEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHH
T ss_pred EEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHH
Confidence 67777753 33333321 1137889999887655432 223345788887643 12234678899
Q ss_pred HHHHhhcCCCeEEEEeCC
Q 014594 210 IADAVEREKPKCIFLTSP 227 (422)
Q Consensus 210 l~~~i~~~~~~~i~l~~p 227 (422)
|...++.-+|+-++..|-
T Consensus 389 L~~~i~~~~Pk~vipvHG 406 (562)
T 3bk2_A 389 LKLILNLTTPRFFLPWHG 406 (562)
T ss_dssp HHHHHHHHCCSEEEEESB
T ss_pred HHHHHHhcCCCEEEEEcC
Confidence 998887667898887764
No 392
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=22.37 E-value=3.1e+02 Score=23.56 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=45.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEc---CC-----------CchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594 149 ILVGCGADELIDLIMRCVLDPGDKIVDC---PP-----------TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~gd~Vl~~---~p-----------~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (422)
++..+||......+..+ .+.|-.|... .| ........++..|++.+.++......--.+.+.+++
T Consensus 8 vvl~SGGkDSs~al~~l-~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l 86 (237)
T 3rjz_A 8 AVLYSGGKDSNYALYWA-IKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVL 86 (237)
T ss_dssp EEECCSSHHHHHHHHHH-HHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHHH
T ss_pred EEEecCcHHHHHHHHHH-HHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHH
Confidence 55667766666555553 4456555321 11 112344566677887777764322122356666776
Q ss_pred hcCCCeEEEEeCCCCccCcCCCHH---HHHHHHcC-CCeE
Q 014594 215 EREKPKCIFLTSPNNPDGSIINDE---DLLKILEM-PILV 250 (422)
Q Consensus 215 ~~~~~~~i~l~~p~NPtG~~~~~e---~l~~i~~~-~~~l 250 (422)
++-+..+++ +|.+.+.. .++.+|.. |+..
T Consensus 87 ~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~ 119 (237)
T 3rjz_A 87 SGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEV 119 (237)
T ss_dssp TTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEE
T ss_pred HhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEE
Confidence 544556666 56665443 33444443 5543
No 393
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=22.17 E-value=2.6e+02 Score=21.19 Aligned_cols=74 Identities=23% Similarity=0.091 Sum_probs=42.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (422)
++|++...+.-+..++-. |.+.|-.|++.+..-..... ++..|..++.-+ ..|.+.++++-- .+.++++++.
T Consensus 8 ~~viIiG~G~~G~~la~~-L~~~g~~v~vid~~~~~~~~-~~~~g~~~i~gd-----~~~~~~l~~a~i-~~ad~vi~~~ 79 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEK-LLASDIPLVVIETSRTRVDE-LRERGVRAVLGN-----AANEEIMQLAHL-ECAKWLILTI 79 (140)
T ss_dssp SCEEEECCSHHHHHHHHH-HHHTTCCEEEEESCHHHHHH-HHHTTCEEEESC-----TTSHHHHHHTTG-GGCSEEEECC
T ss_pred CCEEEECcCHHHHHHHHH-HHHCCCCEEEEECCHHHHHH-HHHcCCCEEECC-----CCCHHHHHhcCc-ccCCEEEEEC
Confidence 467666666666655544 55567666666555444333 334677765432 345666666422 3577888776
Q ss_pred CC
Q 014594 227 PN 228 (422)
Q Consensus 227 p~ 228 (422)
|+
T Consensus 80 ~~ 81 (140)
T 3fwz_A 80 PN 81 (140)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 394
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.14 E-value=3.7e+02 Score=22.97 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=51.4
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++. ...-.... ......+.++..+..|- -|.+.+++.+++ .+
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDV---GNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHhCCC
Confidence 45555554444455566678889887554 33332222 22333577777776532 356666655542 36
Q ss_pred CeEEEEeCCC-CccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPN-NPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~-NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+--. .+.+ .-.+.+++.+..+.
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 6777655222 1112 12477777777664
No 395
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=22.14 E-value=1.5e+02 Score=26.61 Aligned_cols=54 Identities=7% Similarity=0.142 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-------CCeEEE
Q 014594 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (422)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-------~~~li~ 252 (422)
|.+++..+|.+.+++.++. .++..|+++ -++=-+..++.+|..++++. .+.||.
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
No 396
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=22.11 E-value=1.3e+02 Score=27.09 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-------CCeEEE
Q 014594 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (422)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-------~~~li~ 252 (422)
|.+++..+|.+.+++.++. .+...|+++ -++=-+..++.+|..++++. ++.||.
T Consensus 26 Pf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 26 PFSGDGSLDTATAARLANHLVDQGCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
No 397
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.06 E-value=3e+02 Score=25.07 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=47.6
Q ss_pred cCCCCEEEEcCCCchh-------HHH---HHHHcCCEEEEecCC--C-CC--CCC---HHHHHHHhhcCCCeEEEEeCCC
Q 014594 167 LDPGDKIVDCPPTFTM-------YEF---DAAVNGAAVVKVPRK--S-DF--SLN---VELIADAVEREKPKCIFLTSPN 228 (422)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-------~~~---~~~~~g~~~~~v~~~--~-~~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (422)
+++||+|-+.+|+.+. +.. ..+..|.+++.-+.- . ++ +-| .++|.+++..+.+++|+...--
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 6789999999998742 222 234489999886621 1 11 122 4666677776789999876544
Q ss_pred CccCcCCCHHHHHHHHc
Q 014594 229 NPDGSIINDEDLLKILE 245 (422)
Q Consensus 229 NPtG~~~~~e~l~~i~~ 245 (422)
.=+-.+++.=+...|.+
T Consensus 90 ~g~~rlL~~lD~~~i~~ 106 (336)
T 3sr3_A 90 MNSNSLLPYIDYDAFQN 106 (336)
T ss_dssp SCGGGGGGGSCHHHHHH
T ss_pred ccHHHHhhhcChhHHhh
Confidence 33445544433444443
No 398
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.92 E-value=3.9e+02 Score=23.11 Aligned_cols=76 Identities=11% Similarity=-0.028 Sum_probs=40.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc-hhHHHHH---H-HcCCEEEEecCCCCCCCC----HHHHHHHhhc-
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDA---A-VNGAAVVKVPRKSDFSLN----VELIADAVER- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~---~-~~g~~~~~v~~~~~~~~d----~~~l~~~i~~- 216 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.- ....... . ..|.++..+..+- -| .+.+++.+++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv---~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADL---TNSNVLPASCEEIINSC 100 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC---SCSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeec---CCccCCHHHHHHHHHHH
Confidence 3466665555444555666777887776644332 2222221 1 3466666665432 23 5666655532
Q ss_pred ----CCCeEEEEe
Q 014594 217 ----EKPKCIFLT 225 (422)
Q Consensus 217 ----~~~~~i~l~ 225 (422)
.+..+++-+
T Consensus 101 ~~~~g~iD~lvnn 113 (288)
T 2x9g_A 101 FRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHhcCCCCEEEEC
Confidence 366777644
No 399
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.91 E-value=3.6e+02 Score=22.76 Aligned_cols=97 Identities=15% Similarity=0.018 Sum_probs=50.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc-hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCe
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.- ..........|.++..+..| --|.+.+++.+++ .+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPAD---LSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCC---TTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCC---CCCHHHHHHHHHHHHHHcCCCC
Confidence 3466665555444555666788888877643221 21112222246666666543 2356777666542 2677
Q ss_pred EEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 221 CIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 221 ~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
+++-+.-..+.+ ...+.+++.+..+.
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (255)
T 2q2v_A 82 ILVNNAGIQHVAPVEQFPLESWDKIIAL 109 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 776542222222 23467777776654
No 400
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=21.87 E-value=1.5e+02 Score=26.59 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=52.6
Q ss_pred EEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC-HHHHHHHhhcCCCeEEEE
Q 014594 149 ILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFL 224 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l 224 (422)
+++.+|.-..+..++..... +.+.+++.+. ++.....++.+|+.+..+|........ -+++.+.+++.++.++++
T Consensus 99 ~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn-~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivl 177 (292)
T 3lou_A 99 LIMVSKLEHCLADLLFRWKMGELKMDIVGIVSN-HPDFAPLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVIL 177 (292)
T ss_dssp EEEECSCCHHHHHHHHHHHHTSSCCEEEEEEES-SSTTHHHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeC-cHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEEe
Confidence 35566666677777765432 2333333221 122234588899999888743211111 134556666678999998
Q ss_pred eCCCCccCcCCCHHHHHHHH
Q 014594 225 TSPNNPDGSIINDEDLLKIL 244 (422)
Q Consensus 225 ~~p~NPtG~~~~~e~l~~i~ 244 (422)
.. .+.+++.+-+....
T Consensus 178 a~----y~~il~~~~l~~~~ 193 (292)
T 3lou_A 178 AR----YMQVLSPEASARLA 193 (292)
T ss_dssp SS----CCSCCCHHHHHHTT
T ss_pred cC----chhhCCHHHHhhhc
Confidence 65 56788877776643
No 401
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=21.22 E-value=54 Score=28.47 Aligned_cols=59 Identities=10% Similarity=0.019 Sum_probs=37.3
Q ss_pred CCEEEEcCCCch--hHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhc-CCCeEEEEeCCC
Q 014594 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVER-EKPKCIFLTSPN 228 (422)
Q Consensus 170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~~i~l~~p~ 228 (422)
|.+|++..|.-. .+....+..|++++.+|.- ....-|.+.+.+.+.+ .+...|+++++|
T Consensus 6 g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~ 68 (254)
T 4es6_A 6 GWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKP 68 (254)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHH
Confidence 678999998653 5566677799999999831 1111223455554432 356788877765
No 402
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=20.98 E-value=1e+02 Score=26.47 Aligned_cols=94 Identities=16% Similarity=0.080 Sum_probs=49.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCCeEE
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCI 222 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i 222 (422)
..+++|.|+...=..+.+.|.+.|..|++..-.- ....+..+.++..+..|- -|.+.+++.++. .+..++
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG---EDVVADLGDRARFAAADV---TDEAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC---HHHHHHTCTTEEEEECCT---TCHHHHHHHHHHHHHHSCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch---HHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHhCCCCEE
Confidence 3466666555444556666788888777654322 233344566666666432 356666655431 255655
Q ss_pred EEeCCCCccCc------CCCHHHHHHHHcC
Q 014594 223 FLTSPNNPDGS------IINDEDLLKILEM 246 (422)
Q Consensus 223 ~l~~p~NPtG~------~~~~e~l~~i~~~ 246 (422)
+-+.-....+. ..+.+++.+..+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 53321111111 2677777777664
No 403
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=20.55 E-value=4.2e+02 Score=22.97 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=51.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH---H-----cCCEEEEecCCCCCCCCHHHHHHHhhc--
Q 014594 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---V-----NGAAVVKVPRKSDFSLNVELIADAVER-- 216 (422)
Q Consensus 147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~-----~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (422)
..+++|.|+...-..+.+.|.+.|..|++..-.-.......+ . .+.++..+..+- -|.+.+++.+++
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI---RNEEEVNNLVKSTL 95 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT---TCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC---CCHHHHHHHHHHHH
Confidence 457777665555455666678888887765443322222211 1 355666665432 356677666542
Q ss_pred ---CCCeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 217 ---EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 217 ---~~~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
.+..+++-+.-....+ .-.+.+++.+..+.
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 130 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET 130 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 3577776542222222 22466777666553
No 404
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=20.42 E-value=4.4e+02 Score=23.19 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=46.5
Q ss_pred EEEeCCH---HHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH----hhcCCCe
Q 014594 149 ILVGCGA---DELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA----VEREKPK 220 (422)
Q Consensus 149 i~~~~G~---~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~----i~~~~~~ 220 (422)
|+++.|+ .++++.+-.+ .+-| |.|++..|.|... .+.+.+.+. .+..+..
T Consensus 68 ViaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~---------------------~s~~~l~~~f~~va~a~~lP 125 (288)
T 2nuw_A 68 LIFQVGSLNLNDVMELVKFS-NEMDILGVSSHSPYYFPR---------------------LPEKFLAKYYEEIARISSHS 125 (288)
T ss_dssp EEEECCCSCHHHHHHHHHHH-HTSCCSEEEECCCCSSCS---------------------CCHHHHHHHHHHHHHHCCSC
T ss_pred eEEeeCCCCHHHHHHHHHHH-HhcCCCEEEEcCCcCCCC---------------------CCHHHHHHHHHHHHHhcCCC
Confidence 8877765 5666655543 3445 8899999988420 112222222 2212344
Q ss_pred EEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEcc
Q 014594 221 CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDE 254 (422)
Q Consensus 221 ~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~De 254 (422)
+++-+.|.. ||..++.+.+.+| ++.=|=|.
T Consensus 126 iilYn~P~~-tg~~l~~~~~~~L---nIvgiKds 155 (288)
T 2nuw_A 126 LYIYNYPAA-TGYDIPPSILKSL---PVKGIKDT 155 (288)
T ss_dssp EEEEECHHH-HSCCCCHHHHTTT---TEEEEEEC
T ss_pred EEEEECchH-hCcCCCHHHHhcc---EEEEEEeC
Confidence 555465553 8999999998888 44444443
No 405
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.41 E-value=3.7e+02 Score=22.27 Aligned_cols=96 Identities=8% Similarity=0.011 Sum_probs=49.2
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----C--C
Q 014594 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E--K 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~--~ 218 (422)
.+++|.|+...-..+.+.|.+.| ..|++..-.-..........+.++..+..+ --|.+.+++.+++ . +
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLT---VTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECC---TTCHHHHHHHHHHHHHHHGGGC
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEee---cCCHHHHHHHHHHHHHhcCCCC
Confidence 46666655544456666688888 777665433322222221124455555532 2255666655532 1 6
Q ss_pred CeEEEEeCCCCc-cCc--CCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNP-DGS--IINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NP-tG~--~~~~e~l~~i~~~ 246 (422)
..+++-+.-..+ .+. ..+.+++.+..+.
T Consensus 82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1yo6_A 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred CcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence 777775532221 232 2456777766654
No 406
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.41 E-value=2e+02 Score=25.83 Aligned_cols=88 Identities=8% Similarity=0.023 Sum_probs=52.1
Q ss_pred EEEeCCHHHHHHHHHHHhcCC---CCEEE--EcCCCchhHHHHHHHcCCEEEEecCCCCCCCC-HHHHHHHhhcCCCeEE
Q 014594 149 ILVGCGADELIDLIMRCVLDP---GDKIV--DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCI 222 (422)
Q Consensus 149 i~~~~G~~~al~~~~~~l~~~---gd~Vl--~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i 222 (422)
+++.+|.-..+..++...... .+.++ ...|.- ...++..|+.+..+|........ -+++.+.+++.++.+|
T Consensus 109 ~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~---~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dli 185 (302)
T 3o1l_A 109 VLMASRESHCLADLLHRWHSDELDCDIACVISNHQDL---RSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVV 185 (302)
T ss_dssp EEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTT---HHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHH---HHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEE
Confidence 355566556677777654332 23333 223432 34578899999888643211111 2356666766789999
Q ss_pred EEeCCCCccCcCCCHHHHHHH
Q 014594 223 FLTSPNNPDGSIINDEDLLKI 243 (422)
Q Consensus 223 ~l~~p~NPtG~~~~~e~l~~i 243 (422)
++.. .+.+++.+-+...
T Consensus 186 Vlag----ym~IL~~~~l~~~ 202 (302)
T 3o1l_A 186 VLAR----YMQILPPQLCREY 202 (302)
T ss_dssp EESS----CCSCCCTTHHHHT
T ss_pred EHhH----hhhhcCHHHHhhh
Confidence 9875 5677887766654
No 407
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=20.10 E-value=3.8e+02 Score=22.25 Aligned_cols=96 Identities=7% Similarity=0.039 Sum_probs=49.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEE-cCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014594 148 HILVGCGADELIDLIMRCVLDPGDKIVD-CPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (422)
Q Consensus 148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~-~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (422)
.+++|.|+...=..+.+.|.+.|..|++ ....-...... .+..+.++..+..|- -|.+.+++.+++ .+
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV---SKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT---TSHHHHHHHHHHHHHHSSC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCC---CCHHHHHHHHHHHHHHcCC
Confidence 3556555544445556667788888776 33332222221 222466666665432 356777666542 25
Q ss_pred CeEEEEeCCCCccC--cCCCHHHHHHHHcC
Q 014594 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (422)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~e~l~~i~~~ 246 (422)
..+++-+.-....+ ...+.+++.+..+.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDL 109 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHh
Confidence 67776543222222 12466676666553
Done!